Spiroplasma corruscae strain EC-1 plasmid unnamed, complete sequence.
type: Entry
definition: Spiroplasma corruscae strain EC-1 plasmid unnamed, complete sequence.
sequence version: NZ_CP022536.1
sequence date: 2023-05-04
sequence: sequence
division: CON
label: NZ_CP022536.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN07267299
keyword: RefSeq
source: Spiroplasma corruscae
organism: Spiroplasma corruscae
taxonomy: Bacteria; Mycoplasmatota; Mollicutes; Entomoplasmatales; Spiroplasmataceae; Spiroplasma.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP022536.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.2.10\nAssembly Name :: spiro26.06\nGenome Coverage :: 550x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/04/2023 02:50:20\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,072\nCDSs (total) :: 1,037\nGenes (coding) :: 1,032\nCDSs (with protein) :: 1,032\nGenes (RNA) :: 35\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 29\nncRNAs :: 3\nPseudo Genes (total) :: 5\nCDSs (without protein) :: 5\nPseudo Genes (ambiguous residues) :: 0 of 5\nPseudo Genes (frameshifted) :: 0 of 5\nPseudo Genes (incomplete) :: 5 of 5\nPseudo Genes (internal stop) :: 1 of 5\nPseudo Genes (multiple problems) :: 1 of 5\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 29239
topology: circular
so has quality: SO_0000988
location: 1..29239
location: region:1-29239:1
RO_0002162: 216934

NZ_CP022536
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN07267299
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Spiroplasma corruscae EC-1 (DSM 19793)
author: Tsai, Y.-M.
author: Lo, W.-S.
author: Kuo, C.-H.
journal: Unpublished

2
title: Direct Submission
author: Tsai, Y.-M.
author: Lo, W.-S.
author: Kuo, C.-H.
journal: Submitted (20-JUL-2017) Institute of Plant and Microbial Biology, Academia Sinica, 128 Sec. 2, Academia Rd, Taipei 11529, Taiwan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29239:1
position: 29239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-29239:1:source
so part of: sequence
organism: Spiroplasma corruscae
mol type: genomic DNA
strain: EC-1
host: Ellychnia corrusca
culture collection: DSM:19793
type material: type strain of Spiroplasma corruscae
plasmid: unnamed
country: USA: Beltsville, MD
collection date: 1983

216934
type: Taxonomy
SIO_000068: taxonomy

SCORR_RS05200
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05200
so part of: sequence
location: join(28761..29239,1..13)
location: region:1-29239:1
so has part: feature:28761-29239:1:exon
so has part: feature:1-13:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:28761-29239:1:exon

position:28761:1
position: 28761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-13:1:exon

position:13:1
position: 13
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCORR_RS05200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05200
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MLSFKNFDWQYIKEITNIFIGLDKKQILEKIKINNLNISYTTIFYFRKLDNFSTRIKLFLDSCYKLTPSKIQNFIFKYYKKISDDILIYWLKYSEDNNLSAREISDLPIRNELFLKLIDLKEKILLYINLDVEIKNNSIIINFKNKEEVENIITKMEEFLWKK
SIO_010081: SCORR_RS05200
subclass of: SO_0000673
so part of: SCORR_RS05200
location: join(28761..29239,1..13)
location: region:1-29239:1
so has part: feature:28761-29239:1:exon
so has part: feature:1-13:1:exon

WP_094049984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28761-29239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-13:1:exon

SCORR_RS05205
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05205
old locus tag: SCORR_v1c10120
so part of: sequence
location: 1..789
location: region:1-789:1
so has part: feature:1-789:1:exon
subclass of: SO_0000010

position:789:1
position: 789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-789:1:exon

SCORR_RS05205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05205
old locus tag: SCORR_v1c10120
inference: COORDINATES: protein motif:HMM:NF013793.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: ParA family protein
translation: MKKITFSNSKGGVGKTTLSINFAQILSSVGKKVLVIDIDPQANISRYFLKNEYVSNDKIMSWFRDSGIEEISDSILKTDIKNIDIVPAWRELNSKGSIEISQESYSEMKLKFNLDKYNKLLGDVYDFIIFDVHPSFNNILLNVLIAVDLIITPIEPQIFSVEGIETMLLPLKKTVYETRKINPNFIEPKHYFIINKATKGKEHLSIISKFLEMKEIKQKILETTIPSNIKRQKELNAKEEIKVTEKNPFFKLANELAEKELI
SIO_010081: SCORR_RS05205
subclass of: SO_0000673
so part of: SCORR_RS05205
location: 1..789
location: region:1-789:1
so has part: feature:1-789:1:exon

WP_094049986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-789:1:exon

SCORR_RS05210
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05210
old locus tag: SCORR_v1c10130
so part of: sequence
location: 790..1176
location: region:790-1176:1
so has part: feature:790-1176:1:exon
subclass of: SO_0000010

position:790:1
position: 790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176:1
position: 1176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790-1176:1:exon

SCORR_RS05210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05210
old locus tag: SCORR_v1c10130
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MSSKEAKNALAAKLNANKEDKNSLSSLLGIAKDKGADKIEQPHITSAIENIKNLSISKNIDNKKEYKNEDLNKVLKKGFKIKTISLYPDDIEKLEKIREKAGYGVTLSDCARLGIKTIYNMLIKDEND
SIO_010081: SCORR_RS05210
subclass of: SO_0000673
so part of: SCORR_RS05210
location: 790..1176
location: region:790-1176:1
so has part: feature:790-1176:1:exon

WP_094049916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:790-1176:1:exon

SCORR_RS05215
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05215
old locus tag: SCORR_v1c10140
so part of: sequence
location: 1169..1759
location: region:1169-1759:1
so has part: feature:1169-1759:1:exon
subclass of: SO_0000010

position:1169:1
position: 1169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1759:1
position: 1759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1169-1759:1:exon

SCORR_RS05215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05215
old locus tag: SCORR_v1c10140
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: ATP-binding protein
translation: MIKKIICNTDNVNDVKSLFNEIVSLKKNYGVFIFGQPGVGKTFFAKKILDNLKNVYNEIFINQNIKNSFFYIDVHRWISDIVNSWKSESYNSFKVKTNANLLILDDLGSEFFHESTSQNILSLFDDRYSYLESFNSDEIKNITIITSNYSLDELKNKYKKLVKDDVLVNRILSRINGCLNLEVKFIGEDKRKFNKD
SIO_010081: SCORR_RS05215
subclass of: SO_0000673
so part of: SCORR_RS05215
location: 1169..1759
location: region:1169-1759:1
so has part: feature:1169-1759:1:exon

WP_094049918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1169-1759:1:exon

SCORR_RS05220
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05220
old locus tag: SCORR_v1c10150
so part of: sequence
location: 1804..3885
location: region:1804-3885:1
so has part: feature:1804-3885:1:exon
subclass of: SO_0000010

position:1804:1
position: 1804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3885:1
position: 3885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1804-3885:1:exon

SCORR_RS05220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05220
old locus tag: SCORR_v1c10150
EC number: 5.6.2.-
inference: COORDINATES: protein motif:HMM:NF013311.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: DNA topoisomerase
translation: MNILVILESPNKVKKVKKYLEECDKNNNYFVEASVGHIREIDDCGEYSIGVNFNDCSVNYIISNDKKNVVRNLTEKAKLAEMIILATDPDREGEVIAWHLSEILKKHCNNFKRMKLNAITKEEVEKEMNRLCQIDKNYVNSGIARSILDKTCGYILSRVLQDNHIGNSAGRVQSAVLLILHFREEAIKNFVKEEWYTLIDENKILLKNVEKDKKRIDLNKNAYIEKKYKSFEETINTKNKLDNNYVIIEIKNEKFEDKPFFNYTTSSFLKDCKLKLKLKIKESSLIAQNLFEKGLITYIRTDSTNIDKKTKDDISKYIIRNYGEKYLGVLHEVKTKKNDQEGHPAITPTNIEITKNNVNEYLLKNEEDCLTEKEKLVYELVWQNSINSLIKLPNGDKTTYILKNKDEIFTGENKNYIFNGYYDIDNNLDKKNNNVLNWKVGDEIKVFSIQAKLKSTQPLSRFNEATLISELERLGIGRPSTYKNAVNVNIDRFYAQVDKNDSMFVTEKGKKVIEFLIANFISFINLDYTKNMEDDLDRISKEKINYKNYIKIYYEALIKEANKFMIDQMKCPKCNNGFVREAVKKDGTKMGFKQCSDWQKCGWKEEKKLDLSNATPCENEECNGQIYKYDYIDKVSGQKKEGVSCTNKECKWRPGAIQKCQLCNIGWLSEKNGKSGKFISCNNYPNCKFIQSC
SIO_010081: SCORR_RS05220
subclass of: SO_0000673
so part of: SCORR_RS05220
location: 1804..3885
location: region:1804-3885:1
so has part: feature:1804-3885:1:exon

WP_094049920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1804-3885:1:exon

SCORR_RS05225
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05225
old locus tag: SCORR_v1c10160
so part of: sequence
location: 3891..4361
location: region:3891-4361:1
so has part: feature:3891-4361:1:exon
subclass of: SO_0000010

position:3891:1
position: 3891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4361:1
position: 4361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3891-4361:1:exon

SCORR_RS05225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05225
old locus tag: SCORR_v1c10160
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKISDLVKVSGFSKAEFLERIEKEITIYDNQLLNISHKIKKNFKDVNKVPYLQKVLISVKTPDDLEVYKKLAELDYKNKYLFLVEKKLNLEITQKNSFLEGLRENQNQYFFDISNLNHSKENVKKVFGSTLQVNKNRTFEDIKRSKAIEKKKEIKK
SIO_010081: SCORR_RS05225
subclass of: SO_0000673
so part of: SCORR_RS05225
location: 3891..4361
location: region:3891-4361:1
so has part: feature:3891-4361:1:exon

WP_094049922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3891-4361:1:exon

SCORR_RS05230
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05230
old locus tag: SCORR_v1c10170
so part of: sequence
location: 4712..5167
location: region:4712-5167:1
so has part: feature:4712-5167:1:exon
subclass of: SO_0000010

position:4712:1
position: 4712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5167:1
position: 5167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4712-5167:1:exon

SCORR_RS05230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05230
old locus tag: SCORR_v1c10170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MTKYKIGDWVVLYSPISGDKSKKNKGQETRFGFIYNVQTTREKKSKYSIQMLSNKDSQNTNWEYVRRNGTSIKSRNYYNVKVKETFIIRKTFKFEKLSLQEIYDLKKIINKAKAKENVKKVFGSTLQVNKNRTFEDIKRSKAIEKKKEIKK
SIO_010081: SCORR_RS05230
subclass of: SO_0000673
so part of: SCORR_RS05230
location: 4712..5167
location: region:4712-5167:1
so has part: feature:4712-5167:1:exon

WP_094049924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4712-5167:1:exon

SCORR_RS05235
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05235
old locus tag: SCORR_v1c10180
so part of: sequence
location: 5627..6136
location: region:5627-6136:1
so has part: feature:5627-6136:1:exon
subclass of: SO_0000010

position:5627:1
position: 5627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6136:1
position: 6136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5627-6136:1:exon

SCORR_RS05235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05235
old locus tag: SCORR_v1c10180
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MSKKIINYKDIKKGDHIIIKSPIENDAKFRHGYVLNCDNPMGIIIQMITSKDNKNLCKKIKFGEVEGYVKLHYQIKLNIYLNNNAIKKIKKDNINESQIEMIYLMAKKENELFEKLKEEKRRKQKLVLSKKNKIEEIKPVKSTLQVNKNRTFEDIKRSKAIEKKKELKK
SIO_010081: SCORR_RS05235
subclass of: SO_0000673
so part of: SCORR_RS05235
location: 5627..6136
location: region:5627-6136:1
so has part: feature:5627-6136:1:exon

WP_094049926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5627-6136:1:exon

SCORR_RS05240
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05240
old locus tag: SCORR_v1c10190
so part of: sequence
location: 6165..6344
location: region:6165-6344:1
so has part: feature:6165-6344:1:exon
subclass of: SO_0000010

position:6165:1
position: 6165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6344:1
position: 6344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6165-6344:1:exon

SCORR_RS05240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05240
old locus tag: SCORR_v1c10190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKFVLITDIKTKNVIYLNKDDISFIFIEVALSGNKYNIKLKTEGIVIEVSKEDAESLLK
SIO_010081: SCORR_RS05240
subclass of: SO_0000673
so part of: SCORR_RS05240
location: 6165..6344
location: region:6165-6344:1
so has part: feature:6165-6344:1:exon

WP_094049928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6165-6344:1:exon

SCORR_RS05245
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05245
old locus tag: SCORR_v1c10200
so part of: sequence
location: 6425..6736
location: region:6425-6736:1
so has part: feature:6425-6736:1:exon
subclass of: SO_0000010

position:6425:1
position: 6425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6736:1
position: 6736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6425-6736:1:exon

SCORR_RS05245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05245
old locus tag: SCORR_v1c10200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016340719.1
GO function: GO:0004519 - endonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: HNH endonuclease signature motif containing protein
translation: MADKRGKWSKKNLKEIWDDYVDNKIWKIFDRNDLMSWEFGFVDKAPCPARNCGKVMIRSQYLGNQPAGKHCWDVDHINEDSSDNSISNLQPMHPACNKKKSNK
SIO_010081: SCORR_RS05245
subclass of: SO_0000673
so part of: SCORR_RS05245
location: 6425..6736
location: region:6425-6736:1
so has part: feature:6425-6736:1:exon

WP_094049931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6425-6736:1:exon

SCORR_RS05250
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05250
old locus tag: SCORR_v1c10210
so part of: sequence
location: 6864..7235
location: region:6864-7235:1
so has part: feature:6864-7235:1:exon
subclass of: SO_0000010

position:6864:1
position: 6864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7235:1
position: 7235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6864-7235:1:exon

SCORR_RS05250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05250
old locus tag: SCORR_v1c10210
inference: COORDINATES: protein motif:HMM:TIGR00621.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: single-stranded DNA-binding protein
translation: MNKAILLGRITKDPELRKTKNEKEFIGFTLAINEFSKNEKFTQFISCYAWEKTAENMVKYVKKGDMLLVEGSINSKFEKIDDKQIQQTFVSVSKITYLSNSKNENDVKPMHTENEVEVDLWDE
SIO_010081: SCORR_RS05250
subclass of: SO_0000673
so part of: SCORR_RS05250
location: 6864..7235
location: region:6864-7235:1
so has part: feature:6864-7235:1:exon

WP_094049933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6864-7235:1:exon

SCORR_RS05255
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05255
old locus tag: SCORR_v1c10220
so part of: sequence
location: 7308..7571
location: region:7308-7571:1
so has part: feature:7308-7571:1:exon
subclass of: SO_0000010

position:7308:1
position: 7308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7571:1
position: 7571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7308-7571:1:exon

SCORR_RS05255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05255
old locus tag: SCORR_v1c10220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MLPIEKYRNFESLAFQYQEKEDLFYLVLKEIDQQKRNNKFTYVTTLRLKYREHFGIFLDILKYATVEELINIAKPFFKKYREYRKRK
SIO_010081: SCORR_RS05255
subclass of: SO_0000673
so part of: SCORR_RS05255
location: 7308..7571
location: region:7308-7571:1
so has part: feature:7308-7571:1:exon

WP_094049935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7308-7571:1:exon

SCORR_RS05260
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
gene: mobL
locus tag: SCORR_RS05260
old locus tag: SCORR_v1c10230
so part of: sequence
location: 7577..9085
location: region:7577-9085:1
so has part: feature:7577-9085:1:exon
subclass of: SO_0000010

position:7577:1
position: 7577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9085:1
position: 9085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7577-9085:1:exon

SCORR_RS05260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
gene: mobL
locus tag: SCORR_RS05260
old locus tag: SCORR_v1c10230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: relaxase MobL
translation: MKWWNKINKEEYDGNIPILIRSRFFTKTSESKNDYKNSVFVLKEWQDYVLREKAVLKSNLDIDTLKELYFLKYEINNHYKDSIFWKEDEWFYKVNDFLANHKNETKYSNLIQLLKNIDSENSGLWTKEGILNNEQLKDFTNEFNKKISDNQIIWDNVISLDKSFADYTKTLTGKQMYDLINNNINAFFKKAGFCKPEMMEWAFAFHKNTDNPHIHLIFYEKEPTFWNNKKLDYKKKGIIPTSILKLFAFNMAKDLLINKEFIKFQQTIRNDFLKLFKNTIKDIFKKDDLNWDKTKRIYEEIENDANNIKERIWRIKTLNNSKNISYNSKKMDKQTKKMVDDLSLKIIYSNKELKKEYMDYISIIENYQKKLDKLAEKYKSNNENWNIEEDEEDEENDGDLSFKDIYKKNYDLLYGEDGLFSRLGNQILNNINDIKFSYKKSKYNNFFGEINKKFPFKKRYQKLVNNSKNVINEMKYYAKKSYDEYMSKVFFEKEIIEKERVF
SIO_010081: SCORR_RS05260
subclass of: SO_0000673
so part of: SCORR_RS05260
location: 7577..9085
location: region:7577-9085:1
so has part: feature:7577-9085:1:exon

WP_094049937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7577-9085:1:exon

SCORR_RS05270
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05270
old locus tag: SCORR_v1c10250
so part of: sequence
location: 9368..11974
location: region:9368-11974:1
so has part: feature:9368-11974:1:exon
subclass of: SO_0000010

position:9368:1
position: 9368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11974:1
position: 11974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9368-11974:1:exon

SCORR_RS05270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05270
old locus tag: SCORR_v1c10250
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: type IV secretory system conjugative DNA transfer family protein
translation: MSILKRKIKKNRFWNKTIKIRFLKLLIFCLLIVPLVTCIGFIIWNAVMYGNIVKFFKQDFSFFNENKKSIQITLLSFNILFVPIISYFLSFVSYFFKKGVEEETVKISEENILGENAEFLIDDREICVTTTDPDWVAPVKTHSKLNISRLNESYPTGSYEAGFIVRSQWNSSKKELTYSIGKEKHMALFGIPGSAKSQITIIPNIIYSGMVKEVDGETNNDRKKPIIIVNDPKGELFEKTAAILENSGYEIKCLNFKDFEKSSYWNPLSIPYQLFKKGLNFSKEGNGWVKKNTVGGLMAFKNRTKKIKCYKHQKKICEDCTKNAFDHYGELEYLPIAYPNSIKQIYFTNDRDLESYVLSQCKLYKQKAYDAISELAYVICPDDPKGGDKHWTENPRLILEGLLLIFLDMVDAEKNDNPEVQAISEEIFNFGNIKLILSKKEYLLDWFKKYQEKFGHEERQSINKLATPLSLESNIDTFLNTISQKLSIWDSSLLNDITSYDDFNWEEIVKKPTAIFIIMPDKDKKYNFMTSLFVRSSYQKLVDISIDYGDQLPRNVHYIIDEFGVCPMIPDFADMLAVSRSRKIFFLIAMQGRWQLVEKYSDNGANMILDNIHLQCFAQISDINLIKSIEERAGEYSQSVAGHDDLNNVTSSSWQRVKLIPKEAVANLKKGLLIVISSAAKPMFAGNIPFFLGASKKEFQKANGQQFYDKSLSTSKESFQNQRFSVKINKLTNEKVETFLNWENSCKLQILSAVEPENIKISPLEFNKEINVDVSFDEDITIDDLLYSEDNINVTLEITDDDLPGEVNKESVLDINPQNKYFDNDPDLKNKVEMMKELVAKGENKNSEERFKMYNLMNEIGKEIKSKK
SIO_010081: SCORR_RS05270
subclass of: SO_0000673
so part of: SCORR_RS05270
location: 9368..11974
location: region:9368-11974:1
so has part: feature:9368-11974:1:exon

WP_094049941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9368-11974:1:exon

SCORR_RS05275
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05275
old locus tag: SCORR_v1c10260
so part of: sequence
location: 12094..13155
location: region:12094-13155:1
so has part: feature:12094-13155:1:exon
subclass of: SO_0000010

position:12094:1
position: 12094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13155:1
position: 13155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12094-13155:1:exon

SCORR_RS05275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05275
old locus tag: SCORR_v1c10260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MLFELFSAFIMYKIVVKTGKFVGKSFKSKRRSKYVDNNQEFSAEIYKNKNPEVLDPSGFELSEPQLKFKSEKDLMNYVNNHIKKNNINDVKNIIKTDNNNSESIEKFNNIKATLYKKESEFINNYINQKNMKIIKNKNIFDEDINKSDLKAKLVYGLDEEINKDIEFNTTYIKEINKKIKSINKKSKVKVKPKKFNVSKNITQLVKTNPILKNGLLQKEINFKLAKLNILEEQNTYSKTKIDPKFKKQKIYPSDEEKFEFVINNKKKKFISSIKIKNRNDEIINKISDYIDSNWENLKNNKEIINIEKIILDNKIVKNVDNDEKYGSLSINKDNKYKQIVKSDKVFASKKLGK
SIO_010081: SCORR_RS05275
subclass of: SO_0000673
so part of: SCORR_RS05275
location: 12094..13155
location: region:12094-13155:1
so has part: feature:12094-13155:1:exon

WP_094049944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12094-13155:1:exon

SCORR_RS05280
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05280
old locus tag: SCORR_v1c10270
so part of: sequence
location: 13174..13572
location: region:13174-13572:1
so has part: feature:13174-13572:1:exon
subclass of: SO_0000010

position:13174:1
position: 13174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13572:1
position: 13572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13174-13572:1:exon

SCORR_RS05280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05280
old locus tag: SCORR_v1c10270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MIHLKIIKIIILIIKKLMGSMFHDYSGENKVKTNDQQEAYVKSKKRILIYEQTENEKNENNIKKLELKKSDEINNLIYKMKRYCMVQTGQNLSTIITDFEIKIMCKKNDIVIVENLIKNKISDFIGYINTKK
SIO_010081: SCORR_RS05280
subclass of: SO_0000673
so part of: SCORR_RS05280
location: 13174..13572
location: region:13174-13572:1
so has part: feature:13174-13572:1:exon

WP_094049947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13174-13572:1:exon

SCORR_RS05285
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05285
old locus tag: SCORR_v1c10280
so part of: sequence
location: 13863..14318
location: region:13863-14318:1
so has part: feature:13863-14318:1:exon
subclass of: SO_0000010

position:13863:1
position: 13863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14318:1
position: 14318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13863-14318:1:exon

SCORR_RS05285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05285
old locus tag: SCORR_v1c10280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MDNIVGFILPKQKDIKLRNLISLKDLLIIISILMFCFLIVYLIPISTKKSWLTIIIKAVITVIISVPFISLLLPYKKTGFRIYQQIYFAIIFILRPQKFTIENELKSTKNFINYKCIFNEENENDLFKDLIVFGDEEIEIIKNEEKRNKKR
SIO_010081: SCORR_RS05285
subclass of: SO_0000673
so part of: SCORR_RS05285
location: 13863..14318
location: region:13863-14318:1
so has part: feature:13863-14318:1:exon

WP_094049949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13863-14318:1:exon

SCORR_RS05290
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05290
old locus tag: SCORR_v1c10290
so part of: sequence
location: 14290..16731
location: region:14290-16731:1
so has part: feature:14290-16731:1:exon
subclass of: SO_0000010

position:14290:1
position: 14290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16731:1
position: 16731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14290-16731:1:exon

SCORR_RS05290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05290
old locus tag: SCORR_v1c10290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKKEIKKDNYMISYQIMGKDLISLSDLEIQSIFGYLSNMYDHLTERIDIVKVIKPLEQNGMLDFYQELIDVYQKEQKKHEPSSDEFIRLSRKIEQINGYQKQYSKLFEDNIEFVKEYNIVFYSNDLGEIKSACQTFEKQMRSAKYEIKRNDSYNSINLCQRLVSPTATDISPEDIIKNKNNLKEILSFNNIDFKSDYYKINDFYYKVNAICEYPSKVYAGWLNQLVFSDCNFVVSLDKLDYNTQSKIINSNNMVNMINFHGLTDRQKQEQNELAEDAELIDQISMNIANGKEKLFKMSVLFLLESDNVDELFNRNDEIINNLSQFEINVDEFKYRQQQGLGLFMLKPDKVFPKNISTIVPSSTIAIADIFISSELNHENSLTLGVNEMGEYIYWSPFVKPGGIYKAHNGTVLGSIGGGKSFFAKKVSNFINATGNKNIIIDPEAEFLGLAKYFKGKVINVGSGVGEMQNILQIIPQLEDEELIDENSISSTFEDKLNKYISDHIVKINIFFKFLYPEWNEMMLSFLRDSAIKMYKNMSFNTNYKNIEDIPAKKWPIISDLIRQLEIIDKSNLITVQIKELQNMLLVLKTDFENNGMYQNLFNGWSNINIKDNDFIVFNVKQLIDKKSDIGLLNASMLLVFDLIYSEMSRLRLKNDKLLPLIAKDKGYKNKMDAYHFIQKIMIMVDEFHLFIDADNPYTIQQFATIAKRCRKYYTGIIQLTQQVKDLFDYRVEKYSSACVENSQFKMLFALGSNDIMKVKNLFESTGKGISEYDEVFLANAQQGSGLFFYNQKDSIRLFVKATETEKEAIEFR
SIO_010081: SCORR_RS05290
subclass of: SO_0000673
so part of: SCORR_RS05290
location: 14290..16731
location: region:14290-16731:1
so has part: feature:14290-16731:1:exon

WP_094049954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14290-16731:1:exon

SCORR_RS05295
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05295
old locus tag: SCORR_v1c10300
so part of: sequence
location: 16731..17027
location: region:16731-17027:1
so has part: feature:16731-17027:1:exon
subclass of: SO_0000010

position:17027:1
position: 17027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16731-17027:1:exon

SCORR_RS05295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05295
old locus tag: SCORR_v1c10300
inference: COORDINATES: protein motif:HMM:NF012442.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: HU family DNA-binding protein
translation: MVTKEFIKRLSFKLKVSNAVAKNITEIFLNEIRFNLIKYEKLKLINIGKFELIKKDGAKVVRFKKNNLLEKNYIYNWKIKFKPSRNLLSKVKEIKNER
SIO_010081: SCORR_RS05295
subclass of: SO_0000673
so part of: SCORR_RS05295
location: 16731..17027
location: region:16731-17027:1
so has part: feature:16731-17027:1:exon

WP_094049958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16731-17027:1:exon

SCORR_RS05300
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05300
old locus tag: SCORR_v1c10310
so part of: sequence
location: 17017..17694
location: region:17017-17694:1
so has part: feature:17017-17694:1:exon
subclass of: SO_0000010

position:17017:1
position: 17017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17694:1
position: 17694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17017-17694:1:exon

SCORR_RS05300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05300
old locus tag: SCORR_v1c10310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKDKKVVGVGDIEMFSDRISIRITNKDLLEKIIEFKNKYKVTEYSKAPKFRKSLNDFWQEFLNIGLDLDLLENKKDTMIDLISLAIKKANNRQFAIYEQRTDRLFFKMYNQIELLTKMVSSLVNASALKNELIPLLTENGLIDTKFTMIPDAFYEEKKAIESHYANIYEKLKNKKFEKFDEYKLNKEFENLFNIENELSLGEENQQLVKNNISDKIKNGGNEGNE
SIO_010081: SCORR_RS05300
subclass of: SO_0000673
so part of: SCORR_RS05300
location: 17017..17694
location: region:17017-17694:1
so has part: feature:17017-17694:1:exon

WP_094049960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17017-17694:1:exon

SCORR_RS05305
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05305
old locus tag: SCORR_v1c10320
so part of: sequence
location: 17687..18010
location: region:17687-18010:1
so has part: feature:17687-18010:1:exon
subclass of: SO_0000010

position:17687:1
position: 17687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18010:1
position: 18010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17687-18010:1:exon

SCORR_RS05305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05305
old locus tag: SCORR_v1c10320
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MNKLLFYANELYYDFNKKYYADTPGAEDAGKLAKQIGIGIYGVVGIVLGIVVGLTIIISGLMWLIKHNTAKKADEIRNAKNVFIGSIVTSIVLFTIYGVLAVYFAES
SIO_010081: SCORR_RS05305
subclass of: SO_0000673
so part of: SCORR_RS05305
location: 17687..18010
location: region:17687-18010:1
so has part: feature:17687-18010:1:exon

WP_094049962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17687-18010:1:exon

SCORR_RS05310
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05310
old locus tag: SCORR_v1c10330
so part of: sequence
location: 18016..19350
location: region:18016-19350:1
so has part: feature:18016-19350:1:exon
subclass of: SO_0000010

position:18016:1
position: 18016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19350:1
position: 19350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18016-19350:1:exon

SCORR_RS05310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05310
old locus tag: SCORR_v1c10330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MFLDENDRLAIKHKKTIIYSFILGILLLMLFITLVFVLKNKNNNFLEEKLFKINEYSTKDGDEKPGWLGQLIEDIAKKLGDMIKTIINAEYITKILFAILYEIAVAPVIILVSGFSSIMQIIGGEAFISILFSDGDFIDGLPNSFIIMMVFAPMIFLILILIQAILILCDLSGKRRDKVVKSLGGGAKAAALIIGLPCAFFMISWVINIIILVMNKAIISSDIADQKYFLGDAIFKTGFLGSAPDLNGDSFSQRYFVDAFSKIINSKESYLPFMSFILAITIGFSIAGLAISIFKVFYELFILFLFGIIIIPTYVLDNGKKFAIYKNQVIGKFWVIGVTLVGWNAFLGFYPIILNGINKLVPVSILEFKMLVTAAVLTAGVMFTNQIPTMFAAYTNESVGQTEGVNAIKNKYNSSQQKVKSVVGKFSGSGKKSDSGSGRVMGSS
SIO_010081: SCORR_RS05310
subclass of: SO_0000673
so part of: SCORR_RS05310
location: 18016..19350
location: region:18016-19350:1
so has part: feature:18016-19350:1:exon

WP_094049964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18016-19350:1:exon

SCORR_RS05315
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05315
old locus tag: SCORR_v1c10340
so part of: sequence
location: 19353..19898
location: region:19353-19898:1
so has part: feature:19353-19898:1:exon
subclass of: SO_0000010

position:19353:1
position: 19353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19898:1
position: 19898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19353-19898:1:exon

SCORR_RS05315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05315
old locus tag: SCORR_v1c10340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MVKKTKVNVFKKDKIILIVCIICFCLFPVFIFGIYSIASNKEKPKKYDPLNDTAEVIRNSNFEGFNSNEEDSRSYIILFTHYLDNSFAKEWKFYNKLFIENEIVITNSTDVIISTIEVEYISMVDNNVVADNKFKEEFQIIYDFLYDFNNSDIDRIYLDKQFLNLKEYIKDLKINWIKEKE
SIO_010081: SCORR_RS05315
subclass of: SO_0000673
so part of: SCORR_RS05315
location: 19353..19898
location: region:19353-19898:1
so has part: feature:19353-19898:1:exon

WP_094049966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19353-19898:1:exon

SCORR_RS05320
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05320
old locus tag: SCORR_v1c10350
so part of: sequence
location: 20049..20282
location: region:20049-20282:1
so has part: feature:20049-20282:1:exon
subclass of: SO_0000010

position:20049:1
position: 20049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20282:1
position: 20282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20049-20282:1:exon

SCORR_RS05320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05320
old locus tag: SCORR_v1c10350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKLSKKSKKILSKVDGSSINFKKIIRRGKYEVNLDDNESMNKFLKEYEENPKDQDLAMIMLMIYMLDYYSEEFKIEK
SIO_010081: SCORR_RS05320
subclass of: SO_0000673
so part of: SCORR_RS05320
location: 20049..20282
location: region:20049-20282:1
so has part: feature:20049-20282:1:exon

WP_157705422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20049-20282:1:exon

SCORR_RS05325
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05325
old locus tag: SCORR_v1c10360
so part of: sequence
location: 20272..21006
location: region:20272-21006:1
so has part: feature:20272-21006:1:exon
subclass of: SO_0000010

position:20272:1
position: 20272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21006:1
position: 21006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20272-21006:1:exon

SCORR_RS05325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05325
old locus tag: SCORR_v1c10360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKNNEIDYFDRLLNNVSDNLKKSIKIEEVDNFKNNLEKFNELKVYAKYNYMNYDEFRANNDTRNLVTELVKKIQKYDKKVKKVINESYESFIEKEFQKLPKMSDVEWKKKGEENYINLINDINEEIELINISKKKLMEIKYQKMVEKYEKTLKEKEILIKDKETADKDKETADKDKEAKVKDKETEAKEKEILIKKNKNYKEKLSTLKVDKERSIEDIKKNKNLSKEQKEEVINIIKRVKKDER
SIO_010081: SCORR_RS05325
subclass of: SO_0000673
so part of: SCORR_RS05325
location: 20272..21006
location: region:20272-21006:1
so has part: feature:20272-21006:1:exon

WP_094049970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20272-21006:1:exon

SCORR_RS05330
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05330
old locus tag: SCORR_v1c10370
so part of: sequence
location: 20996..21403
location: region:20996-21403:1
so has part: feature:20996-21403:1:exon
subclass of: SO_0000010

position:20996:1
position: 20996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21403:1
position: 21403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20996-21403:1:exon

SCORR_RS05330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05330
old locus tag: SCORR_v1c10370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MSAKIKRIKNIKEDPVYKKIMAKNKENLDKRYEKFEKMFDKMEAMADELILDYRTLAKDYRTLAKDYRTLAKDYRTLAKDYRNIRETYKELRLDLVFQMAELRQISKDLEEINEWVREETRRDQYVKGLRYKYDA
SIO_010081: SCORR_RS05330
subclass of: SO_0000673
so part of: SCORR_RS05330
location: 20996..21403
location: region:20996-21403:1
so has part: feature:20996-21403:1:exon

WP_094049972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20996-21403:1:exon

SCORR_RS05335
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05335
old locus tag: SCORR_v1c10380
so part of: sequence
location: 21456..21935
location: region:21456-21935:1
so has part: feature:21456-21935:1:exon
subclass of: SO_0000010

position:21456:1
position: 21456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21935:1
position: 21935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21456-21935:1:exon

SCORR_RS05335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05335
old locus tag: SCORR_v1c10380
inference: COORDINATES: protein motif:HMM:NF038029.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: lipoprotein
translation: MKKLLSLFGVLGIGASGSSFVVSCGNDSSEHKDPNEGAENESLDAMIERYKELQKRSDELSEIVHGKEVQSHREDDEWLKNNKDVQEDLIVGVDLEVLNYLICQKDGGIDKLKEIGVSEWEIYDSKEKLEKQLNYTVNETGASDETKEYTRKLIEKYCK
SIO_010081: SCORR_RS05335
subclass of: SO_0000673
so part of: SCORR_RS05335
location: 21456..21935
location: region:21456-21935:1
so has part: feature:21456-21935:1:exon

WP_094049973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21456-21935:1:exon

SCORR_RS05340
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05340
old locus tag: SCORR_v1c10390
so part of: sequence
location: 21981..25169
location: region:21981-25169:1
so has part: feature:21981-25169:1:exon
subclass of: SO_0000010

position:21981:1
position: 21981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25169:1
position: 25169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21981-25169:1:exon

SCORR_RS05340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05340
old locus tag: SCORR_v1c10390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKRIVCWTILVYLIILGLFLVSKKEDKIDLFNGGEKNSLVQSRVDPVYPSKEIEVNKKTNMIDTFVELEKSGDIQEGPVGVDNSVNIKDYASNKNEFLKYYKSVSVQVWVGVSYYTYCSSSDCARRYEKDFKFDIKISGSNTGYQKILWKDLYWNRDRVYVAFEVHIEEFWNGDNFGIRTGVKSILHNESKKDYTNMQSEISFKKYSLNSAFNFDTFFNKLDSNSNGLGRGSKNGGSASSNKAKGISIVSKDSPVIDSENNRAMIIKEVKKRIVDCFDGNNGIIDWFENVGNGGKNGLEITIPKQENGSAINAPRVVTQFSFNRKDNGQPREEKWSFTTDVDFKLDNEYWTKNIYERLVISPGSVIDSDGINIIKDIEEVDNEGKGKEQKYNEGKIKYHTTVGLSFGEKKDNPNDKDYDHISINGVQLNGYNGQYNYVLEHFVFDFNNQENVENSTSYKVEITHDANPNIQGDVGGKWSCEIIVENSMDSLNLSLMNWGENNPDYEKLTSPTIKDPATGKEKDNPDYDPRINKKTGTKEKLIWVHKQSNENLPFELDPVSDDNYLIDSKDKKDYDLGYIALASEVGGAGFSNYWGNETFSAVNRYKIDTNMETNNESNPYVVEKNVSSVQTFEGLYHFTIESDVKKSTEGKKNPPYYLQKFMYVNKNYGDFIKDINAINKNNIVSDFWSTSHGDHLRDYMIRYKGWNVAGSEDFNKLSYEGVIAYWKNYVSDIRNGLAKTDPVPDNRVNFVDVTTSNLKSGFQTSTSEIYKKRIRDNVKNRMIDGYWRLNPDEPYKDEDKKVENREYPLKKAKVDLDYQILIYDSMGENGEWKDILDLDLSPYISNEENRSITIKLKLKALPTSTLLIGETEEFSSVHSIDIDETKLVDLSDLDISNQIHNFSGFDKIKFYNNYLKDYPINQVEKLANNKGVRLEYGVDYEISTFGNNGVGVSDNDKNMEEFLKNANETPLNSKELKATIFNIVASNKVEGAKDYLIVHNFYEKPAPDYPEHKGDNNGKNGASSESKKNVPFWIWVVIGLICLGGALGGFVFYQRRKKPGQW
SIO_010081: SCORR_RS05340
subclass of: SO_0000673
so part of: SCORR_RS05340
location: 21981..25169
location: region:21981-25169:1
so has part: feature:21981-25169:1:exon

WP_094049975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21981-25169:1:exon

SCORR_RS05345
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05345
old locus tag: SCORR_v1c10400
so part of: sequence
location: 25446..26105
location: region:25446-26105:1
so has part: feature:25446-26105:1:exon
subclass of: SO_0000010

position:25446:1
position: 25446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26105:1
position: 26105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25446-26105:1:exon

SCORR_RS05345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05345
old locus tag: SCORR_v1c10400
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MENNAKIFVIPTSELIVPKNGLKTYTKIVFDENKKVVLDENGKPRKEEVLDPKTKKPLHLVSILLGKDEFNNSMYFNTVYEYVTPMKAGIYGNPDDMMINKSNGEKVLDPVTKLAMYSQFRKNDVANYAKDAEFGAIKIDLTNNTKISLRSDKQINGEYKYGEKVLTPEQLVEKLSSLEKKAKDIVIEKWKEIDAYKQYKQMKEQKLKEKEMSEIVKTK
SIO_010081: SCORR_RS05345
subclass of: SO_0000673
so part of: SCORR_RS05345
location: 25446..26105
location: region:25446-26105:1
so has part: feature:25446-26105:1:exon

WP_094049977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25446-26105:1:exon

SCORR_RS05350
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05350
old locus tag: SCORR_v1c10410
so part of: sequence
location: 26578..27102
location: region:26578-27102:1
so has part: feature:26578-27102:1:exon
subclass of: SO_0000010

position:26578:1
position: 26578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27102:1
position: 27102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26578-27102:1:exon

SCORR_RS05350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05350
old locus tag: SCORR_v1c10410
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MDIKDIVLIITSVCGVVTAIGSLGLGLINFLRDKKFRRLEVKKNILNIWNIAQKEMIEKGLKEFDERFVEQEKIKVIWDYYEKLCSVLRFNGLIKRSSLGIKKEDVNSEIMVYCVECEKRYSLNKVFKKRINDSMTINRYRISRVFLWKIKMRGWKGKKEILCIQKCFLNNCNN
SIO_010081: SCORR_RS05350
subclass of: SO_0000673
so part of: SCORR_RS05350
location: 26578..27102
location: region:26578-27102:1
so has part: feature:26578-27102:1:exon

WP_094049979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26578-27102:1:exon

SCORR_RS05355
type: Gene
subclass of: SO_0000704
RO_0002162: 216934
locus tag: SCORR_RS05355
old locus tag: SCORR_v1c10420
so part of: sequence
location: 27294..28106
location: region:27294-28106:1
so has part: feature:27294-28106:1:exon
subclass of: SO_0000010

position:27294:1
position: 27294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28106:1
position: 28106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27294-28106:1:exon

SCORR_RS05355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 216934
locus tag: SCORR_RS05355
old locus tag: SCORR_v1c10420
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MVGLNNKYISEKQLNYLKNLYKKLDFENSDFETLPSEKQLEMISQKDAKLLINKIRHILGIKEEVINQYYSWKTLSNIMIKKDWIKSENHKKGSNSFLVWIHDKKNGRIIETYFPKGGVEKQEVVNNEFINKKTGKLIYQGINKSFYGNVIKLNDFYSCGVRLKWNQHFRIIDDKNGEIIEEKKYRSYGEFIELFKFINNEYKDFVAGEEQKIFLMLFNKKKRKEENDIKNAENGKKNNNIDQKLSFDEQKKDEKQELSEEKKEPPFNFW
SIO_010081: SCORR_RS05355
subclass of: SO_0000673
so part of: SCORR_RS05355
location: 27294..28106
location: region:27294-28106:1
so has part: feature:27294-28106:1:exon

WP_094049982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27294-28106:1:exon