Larimichthys crocea isolate SSNF chromosome V, L_crocea_2.0, whole genome shotgun sequence.
type: Entry
definition: Larimichthys crocea isolate SSNF chromosome V, L_crocea_2.0, whole genome shotgun sequence.
sequence version: NC_040015.1
sequence date: 2018-12-05
sequence: sequence
division: CON
label: NC_040015.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA354443
dblink: SAMN03092871
keyword: WGS
keyword: RefSeq
source: Larimichthys crocea (large yellow croaker)
organism: Larimichthys crocea
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys.
reference: 1
references: 25835551
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM011619.1.\nAssembly name: L_crocea_2.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the BGI on 2018/11/27. The\noriginal whole-genome shotgun project has the accession\nJRPU00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: BGI\nAssembly Date :: 01-MAY-2017\nAssembly Method :: Platanus v. 1.2.1\nAssembly Name :: L_crocea_2.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 140x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Larimichthys crocea Annotation\n Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 5657075
topology: linear
so has quality: SO_0000987
location: 1..5657075
location: region:1-5657075:1
RO_0002162: 215358

NC_040015
type: RefSeq
SIO_000068: refseq

PRJNA354443
type: BioProject
SIO_000068: bioproject

SAMN03092871
type: BioSample
SIO_000068: biosample

1
title: Genome sequencing of the perciform fish Larimichthys crocea provides insights into molecular and genetic mechanisms of stress adaptation
author: Ao, J.
author: Mu, Y.
author: Xiang, L.X.
author: Fan, D.
author: Feng, M.
author: Zhang, S.
author: Shi, Q.
author: Zhu, L.Y.
author: Li, T.
author: Ding, Y.
author: Nie, L.
author: Li, Q.
author: Dong, W.R.
author: Jiang, L.
author: Sun, B.
author: Zhang, X.
author: Li, M.
author: Zhang, H.Q.
author: Xie, S.
author: Zhu, Y.
author: Jiang, X.
author: Wang, X.
author: Mu, P.
author: Chen, W.
author: Yue, Z.
author: Wang, Z.
author: Wang, J.
author: Shao, J.Z.
author: Chen, X.
journal: PLoS Genet. 11 (4), e1005118 (2015)
pubmed: 25835551

25835551
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5657075:1
position: 5657075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-5657075:1:source
so part of: sequence
organism: Larimichthys crocea
mol type: genomic DNA
isolate: SSNF
chromosome: V
tissue type: blood
country: China: Southeast region
collection date: Aug-2011

215358
type: Taxonomy
SIO_000068: taxonomy

LOC113745773
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC113745773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4749..7341)
location: region:4749-7341:-1
so has part: feature:4749-7341:-1:exon
subclass of: SO_0000010

113745773
type: Gene
SIO_000068: ncbigene

position:4749:-1
position: 4749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7341:-1
position: 7341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4749-7341:-1:exon

LOC113745773
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC113745773
product: golgin subfamily A member 6-like protein 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027278724.1
SIO_010081: LOC113745773
subclass of: SO_0000673
so part of: LOC113745773
location: complement(join(4749..5522,6453..7341))
location: region:4749-7341:-1
so has part: feature:6453-7341:-1:exon
so has part: feature:4749-5522:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6453-7341:-1:exon

position:6453:-1
position: 6453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4749-5522:-1:exon

position:5522:-1
position: 5522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113745773
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC113745773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 6-like protein 22
translation: MTGFIARGSQPEGSLDRANEVNVFFNRFSGLTGASVQPSLRKEGEARCPEGILLKARWLKNHGGGCEEITFRRPNEDYIKRADIHQLYQNSIVRDLNSKVLNRIHCDIENNWMIENKKIEKERAKHENMKHEQMIRLKNEEAQMREQQEFLNKRLQAQSVAQAQRRQISEKECEKRRQQHQELNAERAMLNERIAREARERSRQAEELAESKKRELRARTEEIFEKRLDREREAQLVLLEEQRTELARLELEEKRRQRKTEQAEKFRQLQIPKQIVSDKLAAFKDEQAINVSLRERQRLERDVALIEAEREKQPAIDAERKAQVLESIAAHRQSVMWETETKKREERQRAVEERKAQIAEHRLFLEHQRLRAQEIKEKNIQLMRDNEMMAAEKRARLEQQRKEEHDAAVRKAEEVQRRDERLQQHVAGELRKATEVLHCGRVLLRPTHKLLPMHLQPRPPTRVPAASPIYGT
SIO_010081: LOC113745773
subclass of: SO_0000673
so part of: LOC113745773
location: complement(join(4749..5522,6453..7097))
location: region:4749-7097:-1
so has part: feature:6453-7097:-1:exon
so has part: feature:4749-5522:-1:exon

XP_027134525.1
type: Protein
SIO_000068: ncbiprotein

position:7097:-1
position: 7097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6453-7097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4749-5522:-1:exon

LOC113745777
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC113745777
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13357..16282)
location: region:13357-16282:-1
so has part: feature:13357-16282:-1:exon
subclass of: SO_0000010

113745777
type: Gene
SIO_000068: ncbigene

position:13357:-1
position: 13357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16282:-1
position: 16282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13357-16282:-1:exon

LOC113745777
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC113745777
product: uncharacterized LOC113745777
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_027278736.1
SIO_010081: LOC113745777
subclass of: SO_0000673
so part of: LOC113745777
location: complement(join(13357..14331,14610..14902,15275..15410,15708..16282))
location: region:13357-16282:-1
so has part: feature:15708-16282:-1:exon
so has part: feature:15275-15410:-1:exon
so has part: feature:14610-14902:-1:exon
so has part: feature:13357-14331:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15708-16282:-1:exon

position:15708:-1
position: 15708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15275-15410:-1:exon

position:15275:-1
position: 15275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15410:-1
position: 15410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14610-14902:-1:exon

position:14610:-1
position: 14610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14902:-1
position: 14902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13357-14331:-1:exon

position:14331:-1
position: 14331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113745777
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC113745777
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113745777
translation: MLVLFMEGSRRIVRLGPFPQTARTVNLMTVKVRKWTRRNGSLQGALSAAEKQRRYRARRDADPERREKYLLKEKENYKKDLQSGKRKNISQVSAREHRQQRRKWRETFYRLKERKRALQEVLATPPHSPEPALDVQPSFSRQRDQGQKTKYKLMKQNDELHSRLKNVTRRKNKYKKQVQRLKRKNESPRTKVNRQIRQLPHAAIRKTLFFHHVLIENIRNKYRNAQGERERQIISKVITGQVMKKYRLQRIAQASVGFSNRRWQNVTDGYTYQRMRKRGIGNYLVDGVRAFYERDDVSRITTGKKQTITVKKTKKQKRFLFPRPTSHR
SIO_010081: LOC113745777
subclass of: SO_0000673
so part of: LOC113745777
location: complement(join(13767..14331,14610..14902,15275..15403))
location: region:13767-15403:-1
so has part: feature:15275-15403:-1:exon
so has part: feature:14610-14902:-1:exon
so has part: feature:13767-14331:-1:exon

XP_027134537.1
type: Protein
SIO_000068: ncbiprotein

position:13767:-1
position: 13767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15403:-1
position: 15403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15275-15403:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14610-14902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13767-14331:-1:exon

LOC109138013
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC109138013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(24485..31314)
location: region:24485-31314:-1
so has part: feature:24485-31314:-1:exon
subclass of: SO_0000011

109138013
type: Gene
SIO_000068: ncbigene

position:24485:-1
position: 24485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31314:-1
position: 31314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24485-31314:-1:exon

LOC109138013
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 215358
nc RNA class: lncRNA
gene: LOC109138013
product: uncharacterized LOC109138013, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003462387.1
SIO_010081: LOC109138013
subclass of: SO_0000673
so part of: LOC109138013
location: complement(join(24485..24778,29968..30178,31199..31314))
location: region:24485-31314:-1
so has part: feature:31199-31314:-1:exon
so has part: feature:29968-30178:-1:exon
so has part: feature:24485-24778:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31199-31314:-1:exon

position:31199:-1
position: 31199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29968-30178:-1:exon

position:29968:-1
position: 29968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30178:-1
position: 30178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24485-24778:-1:exon

position:24778:-1
position: 24778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109138013
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 215358
nc RNA class: lncRNA
gene: LOC109138013
product: uncharacterized LOC109138013, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_002041810.2
SIO_010081: LOC109138013
subclass of: SO_0000673
so part of: LOC109138013
location: complement(join(29133..29814,29942..30178,31199..31314))
location: region:29133-31314:-1
so has part: feature:31199-31314:-1:exon
so has part: feature:29942-30178:-1:exon
so has part: feature:29133-29814:-1:exon

position:29133:-1
position: 29133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31199-31314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29942-30178:-1:exon

position:29942:-1
position: 29942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29133-29814:-1:exon

position:29814:-1
position: 29814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104930359
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104930359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 31199..56223
location: region:31199-56223:1
so has part: feature:31199-56223:1:exon
subclass of: SO_0000010

104930359
type: Gene
SIO_000068: ncbigene

position:31199:1
position: 31199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56223:1
position: 56223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31199-56223:1:exon

LOC104930359
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104930359
product: gephyrin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_010745130.3
SIO_010081: LOC104930359
subclass of: SO_0000673
so part of: LOC104930359
location: join(31199..31486,35254..35332,35431..35488,35997..36089,36535..36629,36781..36847,41194..41487,43363..43464,44182..44319,44582..44624,44787..44924,45290..45382,45647..45702,47021..47140,47224..47282,47394..47547,48056..48177,49045..49132,49246..49319,49898..49962,54573..54676,55067..55163,55728..55866,55983..56223)
location: region:31199-56223:1
so has part: feature:31199-31486:1:exon
so has part: feature:35254-35332:1:exon
so has part: feature:35431-35488:1:exon
so has part: feature:35997-36089:1:exon
so has part: feature:36535-36629:1:exon
so has part: feature:36781-36847:1:exon
so has part: feature:41194-41487:1:exon
so has part: feature:43363-43464:1:exon
so has part: feature:44182-44319:1:exon
so has part: feature:44582-44624:1:exon
so has part: feature:44787-44924:1:exon
so has part: feature:45290-45382:1:exon
so has part: feature:45647-45702:1:exon
so has part: feature:47021-47140:1:exon
so has part: feature:47224-47282:1:exon
so has part: feature:47394-47547:1:exon
so has part: feature:48056-48177:1:exon
so has part: feature:49045-49132:1:exon
so has part: feature:49246-49319:1:exon
so has part: feature:49898-49962:1:exon
so has part: feature:54573-54676:1:exon
so has part: feature:55067-55163:1:exon
so has part: feature:55728-55866:1:exon
so has part: feature:55983-56223:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31199-31486:1:exon

position:31486:1
position: 31486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35254-35332:1:exon

position:35254:1
position: 35254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35332:1
position: 35332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:35431-35488:1:exon

position:35431:1
position: 35431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35488:1
position: 35488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:35997-36089:1:exon

position:35997:1
position: 35997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36089:1
position: 36089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:36535-36629:1:exon

position:36535:1
position: 36535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36629:1
position: 36629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:36781-36847:1:exon

position:36781:1
position: 36781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36847:1
position: 36847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:41194-41487:1:exon

position:41194:1
position: 41194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41487:1
position: 41487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:43363-43464:1:exon

position:43363:1
position: 43363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43464:1
position: 43464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:44182-44319:1:exon

position:44182:1
position: 44182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44319:1
position: 44319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:44582-44624:1:exon

position:44582:1
position: 44582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44624:1
position: 44624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:44787-44924:1:exon

position:44787:1
position: 44787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44924:1
position: 44924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:45290-45382:1:exon

position:45290:1
position: 45290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45382:1
position: 45382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:45647-45702:1:exon

position:45647:1
position: 45647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45702:1
position: 45702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:47021-47140:1:exon

position:47021:1
position: 47021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47140:1
position: 47140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:47224-47282:1:exon

position:47224:1
position: 47224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47282:1
position: 47282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:47394-47547:1:exon

position:47394:1
position: 47394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47547:1
position: 47547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:48056-48177:1:exon

position:48056:1
position: 48056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48177:1
position: 48177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:49045-49132:1:exon

position:49045:1
position: 49045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49132:1
position: 49132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:49246-49319:1:exon

position:49246:1
position: 49246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49319:1
position: 49319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:49898-49962:1:exon

position:49898:1
position: 49898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49962:1
position: 49962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:54573-54676:1:exon

position:54573:1
position: 54573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54676:1
position: 54676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:55067-55163:1:exon

position:55067:1
position: 55067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55163:1
position: 55163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:55728-55866:1:exon

position:55728:1
position: 55728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55866:1
position: 55866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:55983-56223:1:exon

position:55983:1
position: 55983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104930359
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104930359
product: gephyrin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_010745131.3
SIO_010081: LOC104930359
subclass of: SO_0000673
so part of: LOC104930359
location: join(31199..31486,35254..35332,35431..35488,35997..36089,36535..36629,36781..36847,41194..41487,44182..44319,44582..44624,44787..44924,45290..45382,45647..45702,47021..47140,47224..47282,47394..47547,48056..48177,49045..49132,49246..49319,49898..49962,54573..54676,55067..55163,55728..55866,55983..56223)
location: region:31199-56223:1
so has part: feature:31199-31486:1:exon
so has part: feature:35254-35332:1:exon
so has part: feature:35431-35488:1:exon
so has part: feature:35997-36089:1:exon
so has part: feature:36535-36629:1:exon
so has part: feature:36781-36847:1:exon
so has part: feature:41194-41487:1:exon
so has part: feature:44182-44319:1:exon
so has part: feature:44582-44624:1:exon
so has part: feature:44787-44924:1:exon
so has part: feature:45290-45382:1:exon
so has part: feature:45647-45702:1:exon
so has part: feature:47021-47140:1:exon
so has part: feature:47224-47282:1:exon
so has part: feature:47394-47547:1:exon
so has part: feature:48056-48177:1:exon
so has part: feature:49045-49132:1:exon
so has part: feature:49246-49319:1:exon
so has part: feature:49898-49962:1:exon
so has part: feature:54573-54676:1:exon
so has part: feature:55067-55163:1:exon
so has part: feature:55728-55866:1:exon
so has part: feature:55983-56223:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31199-31486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35254-35332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35431-35488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35997-36089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36535-36629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36781-36847:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41194-41487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44182-44319:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44582-44624:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44787-44924:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:45290-45382:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:45647-45702:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:47021-47140:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:47224-47282:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:47394-47547:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:48056-48177:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:49045-49132:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:49246-49319:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:49898-49962:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:54573-54676:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:55067-55163:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:55728-55866:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:55983-56223:1:exon

LOC104930359
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104930359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gephyrin isoform X1
translation: MSWRTFTPKDTRAHTHTEPSSRGAGGAAAAAAAAARTPTHCFYVCAGTVQTEVVNMAADGMVLTNHDHQTRVGILTVSDSCFRNLAEDRSGVNLKDLVHDPSLLGGVIAAYKIVPDEIDEIKDTLLEWCDELELNLILTTGGTGFAPRDVTPEATREVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLREATVGVKATHAALEQLPSPSPLLANTHTNTHSNTHTMERGTQCEEEEDEEEDRRRSRHVHNHHHHQHGSSHITAAAIAAKTSHAVVMAKGGPYLPGNTPAPPTHFTCSCTHDQQIPDSIISRGVQVLPRDSASLSSTPSESPRATQATSRLSTASCPTPKVQSRCGSNENILRASHSAVDISKVARRHRMSPFPLTSMDKAFITVLEMTPILGIEVINYRDGLGRVLAQDIYAKDNLPPFPASVKDGYAVRAADGPGDRFIMGESQAGQQPTHTVMPGQVMRVTTGAPIPCGADAVVQVEDTELLRESEDGTEELEVRIMVQARPGQDIRPIGHDIRRGECVLAKGTHMGPSEIGLLATVGVTEVSVHKFPVVAVMSTGNELLNPEDDLHPGKIRDSNRSTLLSTIQEHGYPTINLGIVGDNPDDLLSALHEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATVDSDGARKLIFALPGNPVSAVVTCNLFVIPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQVSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL
SIO_010081: LOC104930359
subclass of: SO_0000673
so part of: LOC104930359
location: join(31258..31486,35254..35332,35431..35488,35997..36089,36535..36629,36781..36847,41194..41487,43363..43464,44182..44319,44582..44624,44787..44924,45290..45382,45647..45702,47021..47140,47224..47282,47394..47547,48056..48177,49045..49132,49246..49319,49898..49962,54573..54676,55067..55163,55728..55861)
location: region:31258-55861:1
so has part: feature:31258-31486:1:exon
so has part: feature:35254-35332:1:exon
so has part: feature:35431-35488:1:exon
so has part: feature:35997-36089:1:exon
so has part: feature:36535-36629:1:exon
so has part: feature:36781-36847:1:exon
so has part: feature:41194-41487:1:exon
so has part: feature:43363-43464:1:exon
so has part: feature:44182-44319:1:exon
so has part: feature:44582-44624:1:exon
so has part: feature:44787-44924:1:exon
so has part: feature:45290-45382:1:exon
so has part: feature:45647-45702:1:exon
so has part: feature:47021-47140:1:exon
so has part: feature:47224-47282:1:exon
so has part: feature:47394-47547:1:exon
so has part: feature:48056-48177:1:exon
so has part: feature:49045-49132:1:exon
so has part: feature:49246-49319:1:exon
so has part: feature:49898-49962:1:exon
so has part: feature:54573-54676:1:exon
so has part: feature:55067-55163:1:exon
so has part: feature:55728-55861:1:exon

XP_010743432.2
type: Protein
SIO_000068: ncbiprotein

position:31258:1
position: 31258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55861:1
position: 55861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31258-31486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35254-35332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35431-35488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35997-36089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36535-36629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36781-36847:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41194-41487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43363-43464:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44182-44319:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44582-44624:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44787-44924:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:45290-45382:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:45647-45702:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:47021-47140:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:47224-47282:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:47394-47547:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:48056-48177:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:49045-49132:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:49246-49319:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:49898-49962:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:54573-54676:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:55067-55163:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:55728-55861:1:exon

LOC104930359
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104930359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gephyrin isoform X2
translation: MSWRTFTPKDTRAHTHTEPSSRGAGGAAAAAAAAARTPTHCFYVCAGTVQTEVVNMAADGMVLTNHDHQTRVGILTVSDSCFRNLAEDRSGVNLKDLVHDPSLLGGVIAAYKIVPDEIDEIKDTLLEWCDELELNLILTTGGTGFAPRDVTPEATREVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLREATVGVKATHAALEQLPSPSPLLANTHTNTHSNTHTMERGTQCEEEEDEEEDRRRSRHVHNHHHHQHGSSHITAAAIAAKIPDSIISRGVQVLPRDSASLSSTPSESPRATQATSRLSTASCPTPKVQSRCGSNENILRASHSAVDISKVARRHRMSPFPLTSMDKAFITVLEMTPILGIEVINYRDGLGRVLAQDIYAKDNLPPFPASVKDGYAVRAADGPGDRFIMGESQAGQQPTHTVMPGQVMRVTTGAPIPCGADAVVQVEDTELLRESEDGTEELEVRIMVQARPGQDIRPIGHDIRRGECVLAKGTHMGPSEIGLLATVGVTEVSVHKFPVVAVMSTGNELLNPEDDLHPGKIRDSNRSTLLSTIQEHGYPTINLGIVGDNPDDLLSALHEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATVDSDGARKLIFALPGNPVSAVVTCNLFVIPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQVSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL
SIO_010081: LOC104930359
subclass of: SO_0000673
so part of: LOC104930359
location: join(31258..31486,35254..35332,35431..35488,35997..36089,36535..36629,36781..36847,41194..41487,44182..44319,44582..44624,44787..44924,45290..45382,45647..45702,47021..47140,47224..47282,47394..47547,48056..48177,49045..49132,49246..49319,49898..49962,54573..54676,55067..55163,55728..55861)
location: region:31258-55861:1
so has part: feature:31258-31486:1:exon
so has part: feature:35254-35332:1:exon
so has part: feature:35431-35488:1:exon
so has part: feature:35997-36089:1:exon
so has part: feature:36535-36629:1:exon
so has part: feature:36781-36847:1:exon
so has part: feature:41194-41487:1:exon
so has part: feature:44182-44319:1:exon
so has part: feature:44582-44624:1:exon
so has part: feature:44787-44924:1:exon
so has part: feature:45290-45382:1:exon
so has part: feature:45647-45702:1:exon
so has part: feature:47021-47140:1:exon
so has part: feature:47224-47282:1:exon
so has part: feature:47394-47547:1:exon
so has part: feature:48056-48177:1:exon
so has part: feature:49045-49132:1:exon
so has part: feature:49246-49319:1:exon
so has part: feature:49898-49962:1:exon
so has part: feature:54573-54676:1:exon
so has part: feature:55067-55163:1:exon
so has part: feature:55728-55861:1:exon

XP_010743433.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31258-31486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35254-35332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35431-35488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35997-36089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36535-36629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36781-36847:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41194-41487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44182-44319:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44582-44624:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44787-44924:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:45290-45382:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:45647-45702:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:47021-47140:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:47224-47282:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:47394-47547:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:48056-48177:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:49045-49132:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:49246-49319:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:49898-49962:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:54573-54676:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:55067-55163:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:55728-55861:1:exon

LOC104930361
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104930361
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 64866..84959
location: region:64866-84959:1
so has part: feature:64866-84959:1:exon
subclass of: SO_0000010

104930361
type: Gene
SIO_000068: ncbigene

position:64866:1
position: 64866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84959:1
position: 84959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64866-84959:1:exon

LOC104930361
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104930361
product: MAGUK p55 subfamily member 5-A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_027278726.1
SIO_010081: LOC104930361
subclass of: SO_0000673
so part of: LOC104930361
location: join(64866..65082,74663..74998,76357..76534,77016..77116,78416..78523,79403..79480,79588..79728,80724..80885,80997..81074,81155..81338,81486..81557,82771..82842,82995..83162,83265..83354,84153..84265,84356..84466,84549..84959)
location: region:64866-84959:1
so has part: feature:64866-65082:1:exon
so has part: feature:74663-74998:1:exon
so has part: feature:76357-76534:1:exon
so has part: feature:77016-77116:1:exon
so has part: feature:78416-78523:1:exon
so has part: feature:79403-79480:1:exon
so has part: feature:79588-79728:1:exon
so has part: feature:80724-80885:1:exon
so has part: feature:80997-81074:1:exon
so has part: feature:81155-81338:1:exon
so has part: feature:81486-81557:1:exon
so has part: feature:82771-82842:1:exon
so has part: feature:82995-83162:1:exon
so has part: feature:83265-83354:1:exon
so has part: feature:84153-84265:1:exon
so has part: feature:84356-84466:1:exon
so has part: feature:84549-84959:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64866-65082:1:exon

position:65082:1
position: 65082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:74663-74998:1:exon

position:74663:1
position: 74663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74998:1
position: 74998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:76357-76534:1:exon

position:76357:1
position: 76357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76534:1
position: 76534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:77016-77116:1:exon

position:77016:1
position: 77016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77116:1
position: 77116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:78416-78523:1:exon

position:78416:1
position: 78416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78523:1
position: 78523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:79403-79480:1:exon

position:79403:1
position: 79403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79480:1
position: 79480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:79588-79728:1:exon

position:79588:1
position: 79588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79728:1
position: 79728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:80724-80885:1:exon

position:80724:1
position: 80724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80885:1
position: 80885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:80997-81074:1:exon

position:80997:1
position: 80997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81074:1
position: 81074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:81155-81338:1:exon

position:81155:1
position: 81155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81338:1
position: 81338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:81486-81557:1:exon

position:81486:1
position: 81486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81557:1
position: 81557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:82771-82842:1:exon

position:82771:1
position: 82771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82842:1
position: 82842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:82995-83162:1:exon

position:82995:1
position: 82995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83162:1
position: 83162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:83265-83354:1:exon

position:83265:1
position: 83265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83354:1
position: 83354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:84153-84265:1:exon

position:84153:1
position: 84153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84265:1
position: 84265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:84356-84466:1:exon

position:84356:1
position: 84356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84466:1
position: 84466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:84549-84959:1:exon

position:84549:1
position: 84549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104930361
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104930361
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAGUK p55 subfamily member 5-A
translation: MTTSHLNGHVAGEGGGGGGGGGGGGGGGGDEDLRGGQNHREMAVDCPGELGSRTLPVRRSAQLERIRQHQEDLRRRREEEGRQLDLNASLRLRKLSQHPHIGIDNPTFLQDSYTPQQPALSSSHTYALLELEELLLSLKQVRGCLSDQQSQNDIELVLALLNKSDFQSALKIHNAVATSMHRPSPPYPHTQQALQLAMEVRNLIQPSQNKEGLELHSLLSDTHVQSLLLAHDSIAEMEMQPEPLPVQGETLTQWGGETVKIVRIEKAQDIPLGATVRNEMDSVVISRIVRGGAAERSGLLSEGDEILEINGIEIRGKDVNQVFDILADMHGILTFVLIPNTQSKPPPVKENVIHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHIISQSDPNWWQAYRDGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKRKRKKLLYNPHRNDDVDNEEILTYEEMALYHQPANRKRPIALIGPTSCGQAELRQRLLNNQPERFAGAVPHTTRSRREGELSGRDYHFVSRQTFEAELAAGKLIESGEFEKNLYGTSTDSVRQVINTGKICVLCLHTQALKVLRSSDLKPYIIFIAPPSQERLRALLAKDNKNPKPEELRDIIEKAREMEQSCGHLFDAVIVNTDQDKAYTELLRLINKLDTEPQWVPGSWLR
SIO_010081: LOC104930361
subclass of: SO_0000673
so part of: LOC104930361
location: join(74789..74998,76357..76534,77016..77116,78416..78523,79403..79480,79588..79728,80724..80885,80997..81074,81155..81338,81486..81557,82771..82842,82995..83162,83265..83354,84153..84265,84356..84466,84549..84725)
location: region:74789-84725:1
so has part: feature:74789-74998:1:exon
so has part: feature:76357-76534:1:exon
so has part: feature:77016-77116:1:exon
so has part: feature:78416-78523:1:exon
so has part: feature:79403-79480:1:exon
so has part: feature:79588-79728:1:exon
so has part: feature:80724-80885:1:exon
so has part: feature:80997-81074:1:exon
so has part: feature:81155-81338:1:exon
so has part: feature:81486-81557:1:exon
so has part: feature:82771-82842:1:exon
so has part: feature:82995-83162:1:exon
so has part: feature:83265-83354:1:exon
so has part: feature:84153-84265:1:exon
so has part: feature:84356-84466:1:exon
so has part: feature:84549-84725:1:exon

XP_027134527.1
type: Protein
SIO_000068: ncbiprotein

position:74789:1
position: 74789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84725:1
position: 84725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74789-74998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76357-76534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77016-77116:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78416-78523:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:79403-79480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:79588-79728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:80724-80885:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:80997-81074:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:81155-81338:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:81486-81557:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:82771-82842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82995-83162:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:83265-83354:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:84153-84265:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:84356-84466:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:84549-84725:1:exon

LOC104930366
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104930366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 91119..135396
location: region:91119-135396:1
so has part: feature:91119-135396:1:exon
subclass of: SO_0000010

104930366
type: Gene
SIO_000068: ncbigene

position:91119:1
position: 91119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135396:1
position: 135396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91119-135396:1:exon

LOC104930366
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104930366
product: protein Daple, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_010745135.3
SIO_010081: LOC104930366
subclass of: SO_0000673
so part of: LOC104930366
location: join(91119..91787,93357..93469,96710..96818,108123..108192,108527..108585,109443..109526,114279..114422,114678..114913,115410..115491,116302..116460,116710..116856,117103..117253,117359..117540,117633..117770,117867..118151,118232..119029,119113..119240,119342..119483,121656..121805,121907..122068,122149..122426,122918..123061,124578..124764,124855..125000,125507..125596,125684..125988,129879..129962,130038..130145,130232..130369,130566..130804,131699..135396)
location: region:91119-135396:1
so has part: feature:91119-91787:1:exon
so has part: feature:93357-93469:1:exon
so has part: feature:96710-96818:1:exon
so has part: feature:108123-108192:1:exon
so has part: feature:108527-108585:1:exon
so has part: feature:109443-109526:1:exon
so has part: feature:114279-114422:1:exon
so has part: feature:114678-114913:1:exon
so has part: feature:115410-115491:1:exon
so has part: feature:116302-116460:1:exon
so has part: feature:116710-116856:1:exon
so has part: feature:117103-117253:1:exon
so has part: feature:117359-117540:1:exon
so has part: feature:117633-117770:1:exon
so has part: feature:117867-118151:1:exon
so has part: feature:118232-119029:1:exon
so has part: feature:119113-119240:1:exon
so has part: feature:119342-119483:1:exon
so has part: feature:121656-121805:1:exon
so has part: feature:121907-122068:1:exon
so has part: feature:122149-122426:1:exon
so has part: feature:122918-123061:1:exon
so has part: feature:124578-124764:1:exon
so has part: feature:124855-125000:1:exon
so has part: feature:125507-125596:1:exon
so has part: feature:125684-125988:1:exon
so has part: feature:129879-129962:1:exon
so has part: feature:130038-130145:1:exon
so has part: feature:130232-130369:1:exon
so has part: feature:130566-130804:1:exon
so has part: feature:131699-135396:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91119-91787:1:exon

position:91787:1
position: 91787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:93357-93469:1:exon

position:93357:1
position: 93357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93469:1
position: 93469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:96710-96818:1:exon

position:96710:1
position: 96710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96818:1
position: 96818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:108123-108192:1:exon

position:108123:1
position: 108123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108192:1
position: 108192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:108527-108585:1:exon

position:108527:1
position: 108527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108585:1
position: 108585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:109443-109526:1:exon

position:109443:1
position: 109443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109526:1
position: 109526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:114279-114422:1:exon

position:114279:1
position: 114279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114422:1
position: 114422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:114678-114913:1:exon

position:114678:1
position: 114678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114913:1
position: 114913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:115410-115491:1:exon

position:115410:1
position: 115410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115491:1
position: 115491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:116302-116460:1:exon

position:116302:1
position: 116302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116460:1
position: 116460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:116710-116856:1:exon

position:116710:1
position: 116710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116856:1
position: 116856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:117103-117253:1:exon

position:117103:1
position: 117103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117253:1
position: 117253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:117359-117540:1:exon

position:117359:1
position: 117359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117540:1
position: 117540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:117633-117770:1:exon

position:117633:1
position: 117633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117770:1
position: 117770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:117867-118151:1:exon

position:117867:1
position: 117867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118151:1
position: 118151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:118232-119029:1:exon

position:118232:1
position: 118232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119029:1
position: 119029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:119113-119240:1:exon

position:119113:1
position: 119113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119240:1
position: 119240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:119342-119483:1:exon

position:119342:1
position: 119342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119483:1
position: 119483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:121656-121805:1:exon

position:121656:1
position: 121656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121805:1
position: 121805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:121907-122068:1:exon

position:121907:1
position: 121907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122068:1
position: 122068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:122149-122426:1:exon

position:122149:1
position: 122149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122426:1
position: 122426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:122918-123061:1:exon

position:122918:1
position: 122918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123061:1
position: 123061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:124578-124764:1:exon

position:124578:1
position: 124578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124764:1
position: 124764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:124855-125000:1:exon

position:124855:1
position: 124855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125000:1
position: 125000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:125507-125596:1:exon

position:125507:1
position: 125507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125596:1
position: 125596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:125684-125988:1:exon

position:125684:1
position: 125684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125988:1
position: 125988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:129879-129962:1:exon

position:129879:1
position: 129879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129962:1
position: 129962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:130038-130145:1:exon

position:130038:1
position: 130038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130145:1
position: 130145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:130232-130369:1:exon

position:130232:1
position: 130232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130369:1
position: 130369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:130566-130804:1:exon

position:130566:1
position: 130566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130804:1
position: 130804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:131699-135396:1:exon

position:131699:1
position: 131699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104930366
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104930366
product: protein Daple, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_019257055.2
SIO_010081: LOC104930366
subclass of: SO_0000673
so part of: LOC104930366
location: join(91119..91787,93357..93469,96710..96818,108123..108192,108527..108585,109443..109526,114279..114422,114678..114913,115410..115491,116302..116460,116710..116856,117103..117253,117359..117540,117633..117770,117867..118151,118232..119029,119113..119240,119342..119483,121656..121805,121907..122068,122149..122426,122918..123061,124578..124764,124855..125000,125507..125596,125684..125988,128337..128599)
location: region:91119-128599:1
so has part: feature:91119-91787:1:exon
so has part: feature:93357-93469:1:exon
so has part: feature:96710-96818:1:exon
so has part: feature:108123-108192:1:exon
so has part: feature:108527-108585:1:exon
so has part: feature:109443-109526:1:exon
so has part: feature:114279-114422:1:exon
so has part: feature:114678-114913:1:exon
so has part: feature:115410-115491:1:exon
so has part: feature:116302-116460:1:exon
so has part: feature:116710-116856:1:exon
so has part: feature:117103-117253:1:exon
so has part: feature:117359-117540:1:exon
so has part: feature:117633-117770:1:exon
so has part: feature:117867-118151:1:exon
so has part: feature:118232-119029:1:exon
so has part: feature:119113-119240:1:exon
so has part: feature:119342-119483:1:exon
so has part: feature:121656-121805:1:exon
so has part: feature:121907-122068:1:exon
so has part: feature:122149-122426:1:exon
so has part: feature:122918-123061:1:exon
so has part: feature:124578-124764:1:exon
so has part: feature:124855-125000:1:exon
so has part: feature:125507-125596:1:exon
so has part: feature:125684-125988:1:exon
so has part: feature:128337-128599:1:exon

position:128599:1
position: 128599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91119-91787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93357-93469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96710-96818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108123-108192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108527-108585:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:109443-109526:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:114279-114422:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114678-114913:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115410-115491:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:116302-116460:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116710-116856:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117103-117253:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:117359-117540:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:117633-117770:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:117867-118151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:118232-119029:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:119113-119240:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:119342-119483:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:121656-121805:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:121907-122068:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:122149-122426:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:122918-123061:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:124578-124764:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:124855-125000:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:125507-125596:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:125684-125988:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:128337-128599:1:exon

position:128337:1
position: 128337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104930366
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104930366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Daple isoform X1
translation: MDVTLSELLATFMESPLVLWVRTLGPLGSCDVVGSEERVNMFMELVDGVFLHKIMTHIDPSPTNQRLNKNVNNDVALRLHNLTVLTRHIRTYYQETLQQLIVMPLPNILCIAKDPISARSMEDLKRLLLLILGCAVQCERKEEMIEKIKLLDIETQAAIVSHIQEVTHNQLNVLDLSWLEEGSELTHEELEPLSRNMAVSLQQLIDQRDKASEVIVDLTQERDYLCSQQPQEGCRNLGMNSPERGHNSGGDMGVNNGGSSAIVSKLTKEEKQHLSVELADTKSKLRRYRQELEEKTEQLMDSKHEVERLDQELQRLKQENQSLSCEARSVRVYRDEVDSLREKASRVDRLETELSRCKEKLNDVHFYKTRVEELRDDNLTLMETKVLLEEQLSASRGRCDKLHTLEKDNLLLRAKIHDLEMERDNERRRLEELVEENMLLEIGQKQSMNESAHLGWELEQLTKNHDNTNTETRKSLVHELNECVSSRVLKLEKENRELQTSIERLKEDNHLLQEQQLHTQELDRENQSLSKKLERLQGLLDQERLTNQDMESLGEDILKEKQSLEREMHTLRAERDRQISELESEKQHLADAVASLQERAQSNNEARVREVEVENRLLHQNITDTSSRLASLETQLKVVSEEAERLRERAGRCEEVEREAARLERSRDALNREVTSLRACSERSEALEKQVSSLEQEMHRLKREAEEAQRELQRLGRHEAESTLLSKENLELRCSLENLRSSTARLATLQEEHKEAQRETQELHRRLEEAREEVQGERKRVERLELNVAALNQEKHSLEEVIQRSKEEKEEIEGERRETHNREEELKREVEVLKVEQRRKEEIDKERRKLQLDLEQSEKGRKHLEKESWRIRTLLEGKETELEEKTRRLVTVEKEGTALSKEVNRLKEVAVKAKELERENKELQKQATIDKRTLATLREELVSEKLSVQQQSVELERLNEELEKIGLNREKLLQQEHTLEDSRYRLLESRLEETVQQTMKIKEEKISSLERKVEESSALNATLRAELATARQTLSALRQQQEEEENHNSQQRSRSDQGQRSATAELLRIKDHLIDVEKNNASLQTESSLLKEQLKQLENQNASLNSQMVAQQRHTSTLQEQNSALHTQTAKLQVENSTLSSQSASLMAQNAVLQGQVTALETETESWQRQREEAWRGRESVLSDHERLLSVHERQAHEYEQLISQHTALKGKQRALESEYKTLQSKFCTLVQQKEKWEEQEGRGRKEKEELNQQIQKNRLLQQENLQLKTEVDRFTESQSQQSEQSEGLQQRMNELKSSLSSAQLDVSRWMARYDTLMEQHQGLDLTMTKLDNHCELLSRLKGNLEEENHHLLSQINLLSQQNHSLLERSMESKELYHQEQKLYIDKLNALRRQKEKLEEKIMDQYKFYDPTPKKRSQWSGAKALAKLIKPRKEGSRERGSDRDKEGGKDRERAKCAPDIPLPALPPLLPPETPPPVPLRTASDMQDGGHAHSNHNNHTISPTLGPQSPALTPISRGLTDRSRGVYRSSTPGGSNESINGEDGHGQAHKALSSTPSHQSSLSLTNNSSSRLAQGPGRRPRGLLYDEDSRHNNPDSMFGHHGNTGGRPGSADYSHNTSSSNSPVNCRDTSDRQVRSASLSSDDVMGLSQSHQTLSRSSTLPYDHTPQRAQPQRGVGVRTKARSSSPGSEMVTLEQFLQESNIQSPPMVSTGSREDLMADYFRSPAPSVPAGRDQVTPTSYVTPTVQSSNQRPGQSVKPSPRQPVGQSPSTGQPVAQRTGQSLSRAFSLASADLLRSNGPDSFRGNEGQSDVVIRRQGGGANGRERPLSARLAGPTNQHADGSLLNPPIHHSSSLNLQTERYGERERERGRTPVSRNGPSSSSSYHHRGEVAMVTPVRAVPATQPEEASEQGEVSREGRPGDSSHLKKESERVRCGSVERPKSTPASPDPNNDPQTVWYEYGCV
SIO_010081: LOC104930366
subclass of: SO_0000673
so part of: LOC104930366
location: join(91728..91787,93357..93469,96710..96818,108123..108192,108527..108585,109443..109526,114279..114422,114678..114913,115410..115491,116302..116460,116710..116856,117103..117253,117359..117540,117633..117770,117867..118151,118232..119029,119113..119240,119342..119483,121656..121805,121907..122068,122149..122426,122918..123061,124578..124764,124855..125000,125507..125596,125684..125988,129879..129962,130038..130145,130232..130369,130566..130804,131699..132469)
location: region:91728-132469:1
so has part: feature:91728-91787:1:exon
so has part: feature:93357-93469:1:exon
so has part: feature:96710-96818:1:exon
so has part: feature:108123-108192:1:exon
so has part: feature:108527-108585:1:exon
so has part: feature:109443-109526:1:exon
so has part: feature:114279-114422:1:exon
so has part: feature:114678-114913:1:exon
so has part: feature:115410-115491:1:exon
so has part: feature:116302-116460:1:exon
so has part: feature:116710-116856:1:exon
so has part: feature:117103-117253:1:exon
so has part: feature:117359-117540:1:exon
so has part: feature:117633-117770:1:exon
so has part: feature:117867-118151:1:exon
so has part: feature:118232-119029:1:exon
so has part: feature:119113-119240:1:exon
so has part: feature:119342-119483:1:exon
so has part: feature:121656-121805:1:exon
so has part: feature:121907-122068:1:exon
so has part: feature:122149-122426:1:exon
so has part: feature:122918-123061:1:exon
so has part: feature:124578-124764:1:exon
so has part: feature:124855-125000:1:exon
so has part: feature:125507-125596:1:exon
so has part: feature:125684-125988:1:exon
so has part: feature:129879-129962:1:exon
so has part: feature:130038-130145:1:exon
so has part: feature:130232-130369:1:exon
so has part: feature:130566-130804:1:exon
so has part: feature:131699-132469:1:exon

XP_010743437.2
type: Protein
SIO_000068: ncbiprotein

position:91728:1
position: 91728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132469:1
position: 132469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91728-91787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93357-93469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96710-96818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108123-108192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108527-108585:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:109443-109526:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:114279-114422:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114678-114913:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115410-115491:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:116302-116460:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116710-116856:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117103-117253:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:117359-117540:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:117633-117770:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:117867-118151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:118232-119029:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:119113-119240:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:119342-119483:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:121656-121805:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:121907-122068:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:122149-122426:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:122918-123061:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:124578-124764:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:124855-125000:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:125507-125596:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:125684-125988:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:129879-129962:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:130038-130145:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:130232-130369:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:130566-130804:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:131699-132469:1:exon

LOC104930366
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104930366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Daple isoform X3
translation: MDVTLSELLATFMESPLVLWVRTLGPLGSCDVVGSEERVNMFMELVDGVFLHKIMTHIDPSPTNQRLNKNVNNDVALRLHNLTVLTRHIRTYYQETLQQLIVMPLPNILCIAKDPISARSMEDLKRLLLLILGCAVQCERKEEMIEKIKLLDIETQAAIVSHIQEVTHNQLNVLDLSWLEEGSELTHEELEPLSRNMAVSLQQLIDQRDKASEVIVDLTQERDYLCSQQPQEGCRNLGMNSPERGHNSGGDMGVNNGGSSAIVSKLTKEEKQHLSVELADTKSKLRRYRQELEEKTEQLMDSKHEVERLDQELQRLKQENQSLSCEARSVRVYRDEVDSLREKASRVDRLETELSRCKEKLNDVHFYKTRVEELRDDNLTLMETKVLLEEQLSASRGRCDKLHTLEKDNLLLRAKIHDLEMERDNERRRLEELVEENMLLEIGQKQSMNESAHLGWELEQLTKNHDNTNTETRKSLVHELNECVSSRVLKLEKENRELQTSIERLKEDNHLLQEQQLHTQELDRENQSLSKKLERLQGLLDQERLTNQDMESLGEDILKEKQSLEREMHTLRAERDRQISELESEKQHLADAVASLQERAQSNNEARVREVEVENRLLHQNITDTSSRLASLETQLKVVSEEAERLRERAGRCEEVEREAARLERSRDALNREVTSLRACSERSEALEKQVSSLEQEMHRLKREAEEAQRELQRLGRHEAESTLLSKENLELRCSLENLRSSTARLATLQEEHKEAQRETQELHRRLEEAREEVQGERKRVERLELNVAALNQEKHSLEEVIQRSKEEKEEIEGERRETHNREEELKREVEVLKVEQRRKEEIDKERRKLQLDLEQSEKGRKHLEKESWRIRTLLEGKETELEEKTRRLVTVEKEGTALSKEVNRLKEVAVKAKELERENKELQKQATIDKRTLATLREELVSEKLSVQQQSVELERLNEELEKIGLNREKLLQQEHTLEDSRYRLLESRLEETVQQTMKIKEEKISSLERKVEESSALNATLRAELATARQTLSALRQQQEEEENHNSQQRSRSDQGQRSATAELLRIKDHLIDVEKNNASLQTESSLLKEQLKQLENQNASLNSQMVAQQRHTSTLQEQNSALHTQTAKLQVENSTLSSQSASLMAQNAVLQGQVTALETETESWQRQREEAWRGRESVLSDHERLLSVHERQAHEYEQLISQHTALKGKQRALESEYKTLQSKFCTLVQQKEKWEEQEGRGRKEKEELNQQIQKNRLLQQENLQLKTEVDRFTESQSQQSEQSEGLQQRMNELKSSLSSAQLDVSRWMARYDTLMEQHQGLDLTMTKLDNHCELLSRLKGNLEEENHHLLSQINLLSQQNHSLLERSMESKELYHQEQKLYIDKLNALRRQKEKLEEKIMDQYKFYDPTPKKRSQWSGAKALAKLIKPRKEGSRERGSDRDKEGGKDRERAKCAPDIPLPALPPLLPPETPPPVPLRTASDMQDGGHAHSNHNNHTISPTLGPQSPALTPISRAPSNPKRFGFFRSKSQDKLLSPNSSSSTSSSRPSLSLTRRLRFWSSTDITADGITSQPMSANGVF
SIO_010081: LOC104930366
subclass of: SO_0000673
so part of: LOC104930366
location: join(91728..91787,93357..93469,96710..96818,108123..108192,108527..108585,109443..109526,114279..114422,114678..114913,115410..115491,116302..116460,116710..116856,117103..117253,117359..117540,117633..117770,117867..118151,118232..119029,119113..119240,119342..119483,121656..121805,121907..122068,122149..122426,122918..123061,124578..124764,124855..125000,125507..125596,125684..125988,128337..128533)
location: region:91728-128533:1
so has part: feature:91728-91787:1:exon
so has part: feature:93357-93469:1:exon
so has part: feature:96710-96818:1:exon
so has part: feature:108123-108192:1:exon
so has part: feature:108527-108585:1:exon
so has part: feature:109443-109526:1:exon
so has part: feature:114279-114422:1:exon
so has part: feature:114678-114913:1:exon
so has part: feature:115410-115491:1:exon
so has part: feature:116302-116460:1:exon
so has part: feature:116710-116856:1:exon
so has part: feature:117103-117253:1:exon
so has part: feature:117359-117540:1:exon
so has part: feature:117633-117770:1:exon
so has part: feature:117867-118151:1:exon
so has part: feature:118232-119029:1:exon
so has part: feature:119113-119240:1:exon
so has part: feature:119342-119483:1:exon
so has part: feature:121656-121805:1:exon
so has part: feature:121907-122068:1:exon
so has part: feature:122149-122426:1:exon
so has part: feature:122918-123061:1:exon
so has part: feature:124578-124764:1:exon
so has part: feature:124855-125000:1:exon
so has part: feature:125507-125596:1:exon
so has part: feature:125684-125988:1:exon
so has part: feature:128337-128533:1:exon

XP_019112600.1
type: Protein
SIO_000068: ncbiprotein

position:128533:1
position: 128533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91728-91787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93357-93469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96710-96818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108123-108192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108527-108585:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:109443-109526:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:114279-114422:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114678-114913:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115410-115491:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:116302-116460:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116710-116856:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117103-117253:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:117359-117540:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:117633-117770:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:117867-118151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:118232-119029:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:119113-119240:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:119342-119483:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:121656-121805:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:121907-122068:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:122149-122426:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:122918-123061:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:124578-124764:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:124855-125000:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:125507-125596:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:125684-125988:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:128337-128533:1:exon

LOC104930366
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104930366
product: protein Daple, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_027278698.1
SIO_010081: LOC104930366
subclass of: SO_0000673
so part of: LOC104930366
location: join(93356..93469,93638..93794,96710..96818,108123..108192,108527..108585,109443..109526,114279..114422,114678..114913,115410..115491,116302..116460,116710..116856,117103..117253,117359..117540,117633..117770,117867..118151,118232..119029,119113..119240,119342..119483,121656..121805,121907..122068,122149..122426,122918..123061,124578..124764,124855..125000,125507..125596,125684..125988,129879..129962,130038..130145,130232..130369,130566..130804,131699..135396)
location: region:93356-135396:1
so has part: feature:93356-93469:1:exon
so has part: feature:93638-93794:1:exon
so has part: feature:96710-96818:1:exon
so has part: feature:108123-108192:1:exon
so has part: feature:108527-108585:1:exon
so has part: feature:109443-109526:1:exon
so has part: feature:114279-114422:1:exon
so has part: feature:114678-114913:1:exon
so has part: feature:115410-115491:1:exon
so has part: feature:116302-116460:1:exon
so has part: feature:116710-116856:1:exon
so has part: feature:117103-117253:1:exon
so has part: feature:117359-117540:1:exon
so has part: feature:117633-117770:1:exon
so has part: feature:117867-118151:1:exon
so has part: feature:118232-119029:1:exon
so has part: feature:119113-119240:1:exon
so has part: feature:119342-119483:1:exon
so has part: feature:121656-121805:1:exon
so has part: feature:121907-122068:1:exon
so has part: feature:122149-122426:1:exon
so has part: feature:122918-123061:1:exon
so has part: feature:124578-124764:1:exon
so has part: feature:124855-125000:1:exon
so has part: feature:125507-125596:1:exon
so has part: feature:125684-125988:1:exon
so has part: feature:129879-129962:1:exon
so has part: feature:130038-130145:1:exon
so has part: feature:130232-130369:1:exon
so has part: feature:130566-130804:1:exon
so has part: feature:131699-135396:1:exon

position:93356:1
position: 93356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93356-93469:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93638-93794:1:exon

position:93638:1
position: 93638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93794:1
position: 93794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:96710-96818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108123-108192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108527-108585:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:109443-109526:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:114279-114422:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114678-114913:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115410-115491:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:116302-116460:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116710-116856:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117103-117253:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:117359-117540:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:117633-117770:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:117867-118151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:118232-119029:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:119113-119240:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:119342-119483:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:121656-121805:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:121907-122068:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:122149-122426:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:122918-123061:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:124578-124764:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:124855-125000:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:125507-125596:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:125684-125988:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:129879-129962:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:130038-130145:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:130232-130369:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:130566-130804:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:131699-135396:1:exon

LOC104930366
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104930366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Daple isoform X2
translation: MTEAGSDPSPTNQRLNKNVNNDVALRLHNLTVLTRHIRTYYQETLQQLIVMPLPNILCIAKDPISARSMEDLKRLLLLILGCAVQCERKEEMIEKIKLLDIETQAAIVSHIQEVTHNQLNVLDLSWLEEGSELTHEELEPLSRNMAVSLQQLIDQRDKASEVIVDLTQERDYLCSQQPQEGCRNLGMNSPERGHNSGGDMGVNNGGSSAIVSKLTKEEKQHLSVELADTKSKLRRYRQELEEKTEQLMDSKHEVERLDQELQRLKQENQSLSCEARSVRVYRDEVDSLREKASRVDRLETELSRCKEKLNDVHFYKTRVEELRDDNLTLMETKVLLEEQLSASRGRCDKLHTLEKDNLLLRAKIHDLEMERDNERRRLEELVEENMLLEIGQKQSMNESAHLGWELEQLTKNHDNTNTETRKSLVHELNECVSSRVLKLEKENRELQTSIERLKEDNHLLQEQQLHTQELDRENQSLSKKLERLQGLLDQERLTNQDMESLGEDILKEKQSLEREMHTLRAERDRQISELESEKQHLADAVASLQERAQSNNEARVREVEVENRLLHQNITDTSSRLASLETQLKVVSEEAERLRERAGRCEEVEREAARLERSRDALNREVTSLRACSERSEALEKQVSSLEQEMHRLKREAEEAQRELQRLGRHEAESTLLSKENLELRCSLENLRSSTARLATLQEEHKEAQRETQELHRRLEEAREEVQGERKRVERLELNVAALNQEKHSLEEVIQRSKEEKEEIEGERRETHNREEELKREVEVLKVEQRRKEEIDKERRKLQLDLEQSEKGRKHLEKESWRIRTLLEGKETELEEKTRRLVTVEKEGTALSKEVNRLKEVAVKAKELERENKELQKQATIDKRTLATLREELVSEKLSVQQQSVELERLNEELEKIGLNREKLLQQEHTLEDSRYRLLESRLEETVQQTMKIKEEKISSLERKVEESSALNATLRAELATARQTLSALRQQQEEEENHNSQQRSRSDQGQRSATAELLRIKDHLIDVEKNNASLQTESSLLKEQLKQLENQNASLNSQMVAQQRHTSTLQEQNSALHTQTAKLQVENSTLSSQSASLMAQNAVLQGQVTALETETESWQRQREEAWRGRESVLSDHERLLSVHERQAHEYEQLISQHTALKGKQRALESEYKTLQSKFCTLVQQKEKWEEQEGRGRKEKEELNQQIQKNRLLQQENLQLKTEVDRFTESQSQQSEQSEGLQQRMNELKSSLSSAQLDVSRWMARYDTLMEQHQGLDLTMTKLDNHCELLSRLKGNLEEENHHLLSQINLLSQQNHSLLERSMESKELYHQEQKLYIDKLNALRRQKEKLEEKIMDQYKFYDPTPKKRSQWSGAKALAKLIKPRKEGSRERGSDRDKEGGKDRERAKCAPDIPLPALPPLLPPETPPPVPLRTASDMQDGGHAHSNHNNHTISPTLGPQSPALTPISRGLTDRSRGVYRSSTPGGSNESINGEDGHGQAHKALSSTPSHQSSLSLTNNSSSRLAQGPGRRPRGLLYDEDSRHNNPDSMFGHHGNTGGRPGSADYSHNTSSSNSPVNCRDTSDRQVRSASLSSDDVMGLSQSHQTLSRSSTLPYDHTPQRAQPQRGVGVRTKARSSSPGSEMVTLEQFLQESNIQSPPMVSTGSREDLMADYFRSPAPSVPAGRDQVTPTSYVTPTVQSSNQRPGQSVKPSPRQPVGQSPSTGQPVAQRTGQSLSRAFSLASADLLRSNGPDSFRGNEGQSDVVIRRQGGGANGRERPLSARLAGPTNQHADGSLLNPPIHHSSSLNLQTERYGERERERGRTPVSRNGPSSSSSYHHRGEVAMVTPVRAVPATQPEEASEQGEVSREGRPGDSSHLKKESERVRCGSVERPKSTPASPDPNNDPQTVWYEYGCV
SIO_010081: LOC104930366
subclass of: SO_0000673
so part of: LOC104930366
location: join(93778..93794,96710..96818,108123..108192,108527..108585,109443..109526,114279..114422,114678..114913,115410..115491,116302..116460,116710..116856,117103..117253,117359..117540,117633..117770,117867..118151,118232..119029,119113..119240,119342..119483,121656..121805,121907..122068,122149..122426,122918..123061,124578..124764,124855..125000,125507..125596,125684..125988,129879..129962,130038..130145,130232..130369,130566..130804,131699..132469)
location: region:93778-132469:1
so has part: feature:93778-93794:1:exon
so has part: feature:96710-96818:1:exon
so has part: feature:108123-108192:1:exon
so has part: feature:108527-108585:1:exon
so has part: feature:109443-109526:1:exon
so has part: feature:114279-114422:1:exon
so has part: feature:114678-114913:1:exon
so has part: feature:115410-115491:1:exon
so has part: feature:116302-116460:1:exon
so has part: feature:116710-116856:1:exon
so has part: feature:117103-117253:1:exon
so has part: feature:117359-117540:1:exon
so has part: feature:117633-117770:1:exon
so has part: feature:117867-118151:1:exon
so has part: feature:118232-119029:1:exon
so has part: feature:119113-119240:1:exon
so has part: feature:119342-119483:1:exon
so has part: feature:121656-121805:1:exon
so has part: feature:121907-122068:1:exon
so has part: feature:122149-122426:1:exon
so has part: feature:122918-123061:1:exon
so has part: feature:124578-124764:1:exon
so has part: feature:124855-125000:1:exon
so has part: feature:125507-125596:1:exon
so has part: feature:125684-125988:1:exon
so has part: feature:129879-129962:1:exon
so has part: feature:130038-130145:1:exon
so has part: feature:130232-130369:1:exon
so has part: feature:130566-130804:1:exon
so has part: feature:131699-132469:1:exon

XP_027134499.1
type: Protein
SIO_000068: ncbiprotein

position:93778:1
position: 93778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93778-93794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96710-96818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108123-108192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108527-108585:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109443-109526:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114279-114422:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:114678-114913:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:115410-115491:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:116302-116460:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:116710-116856:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:117103-117253:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117359-117540:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:117633-117770:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:117867-118151:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:118232-119029:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:119113-119240:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:119342-119483:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:121656-121805:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:121907-122068:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:122149-122426:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:122918-123061:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:124578-124764:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:124855-125000:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:125507-125596:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:125684-125988:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:129879-129962:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:130038-130145:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:130232-130369:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:130566-130804:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:131699-132469:1:exon

snapc1
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: snapc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 136254..142563
location: region:136254-142563:1
so has part: feature:136254-142563:1:exon
subclass of: SO_0000010

104930362
type: Gene
SIO_000068: ncbigene

position:136254:1
position: 136254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142563:1
position: 142563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136254-142563:1:exon

snapc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: snapc1
product: small nuclear RNA activating complex polypeptide 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_010745133.3
SIO_010081: snapc1
subclass of: SO_0000673
so part of: snapc1
location: join(136254..136549,137832..137988,138085..138225,138468..138572,138762..138914,139659..139712,139906..139968,140112..140250,141948..142019,142297..142563)
location: region:136254-142563:1
so has part: feature:136254-136549:1:exon
so has part: feature:137832-137988:1:exon
so has part: feature:138085-138225:1:exon
so has part: feature:138468-138572:1:exon
so has part: feature:138762-138914:1:exon
so has part: feature:139659-139712:1:exon
so has part: feature:139906-139968:1:exon
so has part: feature:140112-140250:1:exon
so has part: feature:141948-142019:1:exon
so has part: feature:142297-142563:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136254-136549:1:exon

position:136549:1
position: 136549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137832-137988:1:exon

position:137832:1
position: 137832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137988:1
position: 137988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:138085-138225:1:exon

position:138085:1
position: 138085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138225:1
position: 138225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:138468-138572:1:exon

position:138468:1
position: 138468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138572:1
position: 138572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:138762-138914:1:exon

position:138762:1
position: 138762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138914:1
position: 138914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:139659-139712:1:exon

position:139659:1
position: 139659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139712:1
position: 139712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:139906-139968:1:exon

position:139906:1
position: 139906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139968:1
position: 139968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:140112-140250:1:exon

position:140112:1
position: 140112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140250:1
position: 140250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:141948-142019:1:exon

position:141948:1
position: 141948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142019:1
position: 142019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:142297-142563:1:exon

position:142297:1
position: 142297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

snapc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: snapc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: snRNA-activating protein complex subunit 1
translation: MDFCRKEVKSDCEQLLSRFQRTGSVRFEIFSRLWREMKFSHIFYGTAGHQKRAFSHLILDTARSFFLPPFSFQIRVGGLYLLYSLYQCQTAEPKEQIRLALKDWEDVKKFEKNAVDAQHHDTVYILQQLMLLKAFYFTAMPSQLVFKKKKKMEKSVLCEEFIERASRPQELITIDLLEELSNINELYEKLKTSVASSEQAVSSINLVRTDMVPQLRSTVVDFYKWQQKKEVTVEDEDSGEGTSSQQECSERAERLADIKSRAYGQAAEASKSRRHRQVEVDFTSNEAGPSHSSSYTRIYKRSLKARTMENVHISGDKWKDVTSSSYIPRLTTLDFIPEEKPKKCKKFKW
SIO_010081: snapc1
subclass of: SO_0000673
so part of: snapc1
location: join(136419..136549,137832..137988,138085..138225,138468..138572,138762..138914,139659..139712,139906..139968,140112..140250,141948..142019,142297..142331)
location: region:136419-142331:1
so has part: feature:136419-136549:1:exon
so has part: feature:137832-137988:1:exon
so has part: feature:138085-138225:1:exon
so has part: feature:138468-138572:1:exon
so has part: feature:138762-138914:1:exon
so has part: feature:139659-139712:1:exon
so has part: feature:139906-139968:1:exon
so has part: feature:140112-140250:1:exon
so has part: feature:141948-142019:1:exon
so has part: feature:142297-142331:1:exon

XP_010743435.1
type: Protein
SIO_000068: ncbiprotein

position:136419:1
position: 136419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142331:1
position: 142331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136419-136549:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137832-137988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138085-138225:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138468-138572:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:138762-138914:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139659-139712:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:139906-139968:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:140112-140250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:141948-142019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142297-142331:1:exon

syt16
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: syt16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 144308..178308
location: region:144308-178308:1
so has part: feature:144308-178308:1:exon
subclass of: SO_0000010

104930367
type: Gene
SIO_000068: ncbigene

position:144308:1
position: 144308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178308:1
position: 178308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144308-178308:1:exon

syt16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: syt16
product: synaptotagmin 16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_027278750.1
SIO_010081: syt16
subclass of: SO_0000673
so part of: syt16
location: join(144308..144393,144564..144720,148328..148574,158219..158392,167696..167926,171289..171527,176114..176575,176661..176850,177546..178308)
location: region:144308-178308:1
so has part: feature:144308-144393:1:exon
so has part: feature:144564-144720:1:exon
so has part: feature:148328-148574:1:exon
so has part: feature:158219-158392:1:exon
so has part: feature:167696-167926:1:exon
so has part: feature:171289-171527:1:exon
so has part: feature:176114-176575:1:exon
so has part: feature:176661-176850:1:exon
so has part: feature:177546-178308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144308-144393:1:exon

position:144393:1
position: 144393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144564-144720:1:exon

position:144564:1
position: 144564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144720:1
position: 144720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148328-148574:1:exon

position:148328:1
position: 148328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148574:1
position: 148574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:158219-158392:1:exon

position:158219:1
position: 158219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158392:1
position: 158392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:167696-167926:1:exon

position:167696:1
position: 167696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167926:1
position: 167926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:171289-171527:1:exon

position:171289:1
position: 171289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171527:1
position: 171527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:176114-176575:1:exon

position:176114:1
position: 176114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176575:1
position: 176575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:176661-176850:1:exon

position:176661:1
position: 176661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176850:1
position: 176850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:177546-178308:1:exon

position:177546:1
position: 177546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

syt16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: syt16
product: synaptotagmin 16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_019260381.2
SIO_010081: syt16
subclass of: SO_0000673
so part of: syt16
location: join(144308..144393,144564..144720,158150..158392,167696..167926,171289..171527,176114..176575,176661..176850,177546..178308)
location: region:144308-178308:1
so has part: feature:144308-144393:1:exon
so has part: feature:144564-144720:1:exon
so has part: feature:158150-158392:1:exon
so has part: feature:167696-167926:1:exon
so has part: feature:171289-171527:1:exon
so has part: feature:176114-176575:1:exon
so has part: feature:176661-176850:1:exon
so has part: feature:177546-178308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144308-144393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144564-144720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158150-158392:1:exon

position:158150:1
position: 158150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:167696-167926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171289-171527:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:176114-176575:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:176661-176850:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:177546-178308:1:exon

syt16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: syt16
product: synaptotagmin 16, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019260383.2
SIO_010081: syt16
subclass of: SO_0000673
so part of: syt16
location: join(144309..144393,144564..144720,158219..158392,167696..167926,171289..171527,176114..176575,176661..176850,177546..178308)
location: region:144309-178308:1
so has part: feature:144309-144393:1:exon
so has part: feature:144564-144720:1:exon
so has part: feature:158219-158392:1:exon
so has part: feature:167696-167926:1:exon
so has part: feature:171289-171527:1:exon
so has part: feature:176114-176575:1:exon
so has part: feature:176661-176850:1:exon
so has part: feature:177546-178308:1:exon

position:144309:1
position: 144309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144309-144393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144564-144720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158219-158392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167696-167926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171289-171527:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:176114-176575:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:176661-176850:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:177546-178308:1:exon

syt16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: syt16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-16 isoform X1
translation: MASDNCLFVWSDQCVIVCPLSLSLLLPVPPEAIGFLSAVGVFIVALAVLFLFINKKLCFSRVGGLPCLEQHGRRKKGRLGVRQGLVNSYGEDEDDGSSSSDSEEEVLKQFEISVSRSQSFRTAASNGSEQQSQQTQLALGRRHKFTRLSDQEEGSTEPSDCEEMGAPIPQGFKDPLSAAVEENERASALSLDTPAGLEASGARESPTPSMNRQAADGSEGTEKAMDLDKNEATDSSSTWSPEQEQPPHDEVSTQPVISSPRPPISKCGDLVLSLEYHPDTEKLLVSVVAARDIPDKARSGMDSWQVHMVLLPSKKQRQKTSVQKGSLPHFNETFRFSRLDPSELHMSAIRFRLYALGGRMSRERMMGEKVLRLGGLNPEGGTMEVTLVLEPRSNLKSLDSQLSLSAVSQSDSASSTQSLTHGGVPELLVGLSYNATTGRMSVELIKGSHFRNLAINRPPDTYGRLTLLNSVGQEISRCKTSVRRGQPNPVYKETFVFQVALFQLSDVTLLVSIYNRRSMKRKEMVGWIALGQNSSGEEEQLHWQDMKESRGQQVCRWHVLLEA
SIO_010081: syt16
subclass of: SO_0000673
so part of: syt16
location: join(144708..144720,158150..158392,167696..167926,171289..171527,176114..176575,176661..176850,177546..177859)
location: region:144708-177859:1
so has part: feature:144708-144720:1:exon
so has part: feature:158150-158392:1:exon
so has part: feature:167696-167926:1:exon
so has part: feature:171289-171527:1:exon
so has part: feature:176114-176575:1:exon
so has part: feature:176661-176850:1:exon
so has part: feature:177546-177859:1:exon

XP_019115926.1
type: Protein
SIO_000068: ncbiprotein

position:144708:1
position: 144708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177859:1
position: 177859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144708-144720:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158150-158392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167696-167926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171289-171527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176114-176575:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:176661-176850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:177546-177859:1:exon

syt16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: syt16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-16 isoform X3
translation: MASDIPPEAIGFLSAVGVFIVALAVLFLFINKKLCFSRVGGLPCLEQHGRRKKGRLGVRQGLVNSYGEDEDDGSSSSDSEEEVLKQFEISVSRSQSFRTAASNGSEQQSQQTQLALGRRHKFTRLSDQEEGSTEPSDCEEMGAPIPQGFKDPLSAAVEENERASALSLDTPAGLEASGARESPTPSMNRQAADGSEGTEKAMDLDKNEATDSSSTWSPEQEQPPHDEVSTQPVISSPRPPISKCGDLVLSLEYHPDTEKLLVSVVAARDIPDKARSGMDSWQVHMVLLPSKKQRQKTSVQKGSLPHFNETFRFSRLDPSELHMSAIRFRLYALGGRMSRERMMGEKVLRLGGLNPEGGTMEVTLVLEPRSNLKSLDSQLSLSAVSQSDSASSTQSLTHGGVPELLVGLSYNATTGRMSVELIKGSHFRNLAINRPPDTYGRLTLLNSVGQEISRCKTSVRRGQPNPVYKETFVFQVALFQLSDVTLLVSIYNRRSMKRKEMVGWIALGQNSSGEEEQLHWQDMKESRGQQVCRWHVLLEA
SIO_010081: syt16
subclass of: SO_0000673
so part of: syt16
location: join(144708..144720,158219..158392,167696..167926,171289..171527,176114..176575,176661..176850,177546..177859)
location: region:144708-177859:1
so has part: feature:144708-144720:1:exon
so has part: feature:158219-158392:1:exon
so has part: feature:167696-167926:1:exon
so has part: feature:171289-171527:1:exon
so has part: feature:176114-176575:1:exon
so has part: feature:176661-176850:1:exon
so has part: feature:177546-177859:1:exon

XP_019115928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144708-144720:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158219-158392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167696-167926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171289-171527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176114-176575:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:176661-176850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:177546-177859:1:exon

syt16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: syt16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-16 isoform X2
translation: MASKGEANETTRSTYGNKFPPEAIGFLSAVGVFIVALAVLFLFINKKLCFSRVGGLPCLEQHGRRKKGRLGVRQGLVNSYGEDEDDGSSSSDSEEEVLKQFEISVSRSQSFRTAASNGSEQQSQQTQLALGRRHKFTRLSDQEEGSTEPSDCEEMGAPIPQGFKDPLSAAVEENERASALSLDTPAGLEASGARESPTPSMNRQAADGSEGTEKAMDLDKNEATDSSSTWSPEQEQPPHDEVSTQPVISSPRPPISKCGDLVLSLEYHPDTEKLLVSVVAARDIPDKARSGMDSWQVHMVLLPSKKQRQKTSVQKGSLPHFNETFRFSRLDPSELHMSAIRFRLYALGGRMSRERMMGEKVLRLGGLNPEGGTMEVTLVLEPRSNLKSLDSQLSLSAVSQSDSASSTQSLTHGGVPELLVGLSYNATTGRMSVELIKGSHFRNLAINRPPDTYGRLTLLNSVGQEISRCKTSVRRGQPNPVYKETFVFQVALFQLSDVTLLVSIYNRRSMKRKEMVGWIALGQNSSGEEEQLHWQDMKESRGQQVCRWHVLLEA
SIO_010081: syt16
subclass of: SO_0000673
so part of: syt16
location: join(148520..148574,158219..158392,167696..167926,171289..171527,176114..176575,176661..176850,177546..177859)
location: region:148520-177859:1
so has part: feature:148520-148574:1:exon
so has part: feature:158219-158392:1:exon
so has part: feature:167696-167926:1:exon
so has part: feature:171289-171527:1:exon
so has part: feature:176114-176575:1:exon
so has part: feature:176661-176850:1:exon
so has part: feature:177546-177859:1:exon

XP_027134551.1
type: Protein
SIO_000068: ncbiprotein

position:148520:1
position: 148520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148520-148574:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158219-158392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167696-167926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171289-171527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176114-176575:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:176661-176850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:177546-177859:1:exon

syt16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: syt16
product: synaptotagmin 16, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027278751.1
SIO_010081: syt16
subclass of: SO_0000673
so part of: syt16
location: join(167087..167109,167696..167926,171289..171527,176114..176575,176661..176850,177546..178308)
location: region:167087-178308:1
so has part: feature:167087-167109:1:exon
so has part: feature:167696-167926:1:exon
so has part: feature:171289-171527:1:exon
so has part: feature:176114-176575:1:exon
so has part: feature:176661-176850:1:exon
so has part: feature:177546-178308:1:exon

position:167087:1
position: 167087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167087-167109:1:exon

position:167109:1
position: 167109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:167696-167926:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171289-171527:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176114-176575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176661-176850:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:177546-178308:1:exon

syt16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: syt16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-16 isoform X4
translation: MNSYGEDEDDGSSSSDSEEEVLKQFEISVSRSQSFRTAASNGSEQQSQQTQLALGRRHKFTRLSDQEEGSTEPSDCEEMGAPIPQGFKDPLSAAVEENERASALSLDTPAGLEASGARESPTPSMNRQAADGSEGTEKAMDLDKNEATDSSSTWSPEQEQPPHDEVSTQPVISSPRPPISKCGDLVLSLEYHPDTEKLLVSVVAARDIPDKARSGMDSWQVHMVLLPSKKQRQKTSVQKGSLPHFNETFRFSRLDPSELHMSAIRFRLYALGGRMSRERMMGEKVLRLGGLNPEGGTMEVTLVLEPRSNLKSLDSQLSLSAVSQSDSASSTQSLTHGGVPELLVGLSYNATTGRMSVELIKGSHFRNLAINRPPDTYGRLTLLNSVGQEISRCKTSVRRGQPNPVYKETFVFQVALFQLSDVTLLVSIYNRRSMKRKEMVGWIALGQNSSGEEEQLHWQDMKESRGQQVCRWHVLLEA
SIO_010081: syt16
subclass of: SO_0000673
so part of: syt16
location: join(167109,167696..167926,171289..171527,176114..176575,176661..176850,177546..177859)
location: region:167109-177859:1
so has part: feature:167109-167109:1:exon
so has part: feature:167696-167926:1:exon
so has part: feature:171289-171527:1:exon
so has part: feature:176114-176575:1:exon
so has part: feature:176661-176850:1:exon
so has part: feature:177546-177859:1:exon

XP_027134552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167109-167109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167696-167926:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171289-171527:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176114-176575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176661-176850:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:177546-177859:1:exon

LOC104930363
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104930363
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 186152..192984
location: region:186152-192984:1
so has part: feature:186152-192984:1:exon
subclass of: SO_0000011

104930363
type: Gene
SIO_000068: ncbigene

position:186152:1
position: 186152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192984:1
position: 192984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186152-192984:1:exon

LOC104930363
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 215358
nc RNA class: lncRNA
gene: LOC104930363
product: uncharacterized LOC104930363
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_797372.3
SIO_010081: LOC104930363
subclass of: SO_0000673
so part of: LOC104930363
location: join(186152..186481,187730..187820,189086..189206,190365..192984)
location: region:186152-192984:1
so has part: feature:186152-186481:1:exon
so has part: feature:187730-187820:1:exon
so has part: feature:189086-189206:1:exon
so has part: feature:190365-192984:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186152-186481:1:exon

position:186481:1
position: 186481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:187730-187820:1:exon

position:187730:1
position: 187730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187820:1
position: 187820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:189086-189206:1:exon

position:189086:1
position: 189086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189206:1
position: 189206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:190365-192984:1:exon

position:190365:1
position: 190365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sgpp1
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: sgpp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 193897..219916
location: region:193897-219916:1
so has part: feature:193897-219916:1:exon
subclass of: SO_0000010

104930364
type: Gene
SIO_000068: ncbigene

position:193897:1
position: 193897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219916:1
position: 219916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193897-219916:1:exon

sgpp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: sgpp1
product: sphingosine-1-phosphate phosphatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010745134.3
SIO_010081: sgpp1
subclass of: SO_0000673
so part of: sgpp1
location: join(193897..195132,205868..205957,214870..215417,216727..219916)
location: region:193897-219916:1
so has part: feature:193897-195132:1:exon
so has part: feature:205868-205957:1:exon
so has part: feature:214870-215417:1:exon
so has part: feature:216727-219916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193897-195132:1:exon

position:195132:1
position: 195132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205868-205957:1:exon

position:205868:1
position: 205868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205957:1
position: 205957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:214870-215417:1:exon

position:214870:1
position: 214870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215417:1
position: 215417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:216727-219916:1:exon

position:216727:1
position: 216727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sgpp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: sgpp1
product: sphingosine-1-phosphate phosphatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_027278725.1
SIO_010081: sgpp1
subclass of: SO_0000673
so part of: sgpp1
location: join(193897..195132,205868..205957,214870..215417,216751..219916)
location: region:193897-219916:1
so has part: feature:193897-195132:1:exon
so has part: feature:205868-205957:1:exon
so has part: feature:214870-215417:1:exon
so has part: feature:216751-219916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193897-195132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205868-205957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214870-215417:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216751-219916:1:exon

position:216751:1
position: 216751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sgpp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: sgpp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingosine-1-phosphate phosphatase 1 isoform X1
translation: MEKSSRIVELYYYLQDPHHVARFQRICGVRGTFSRTVSAGSTATISSSSKEADRSHSHNNGACHHHSTAENEGESLAVMGAGEGEEVQTTAGVRKRTVESIGVKNSGEEAGNAAQNGAAVSAATAGGETVGVGSNGRSLAGATAAGQGATESEKTGPEKDCEGPQASSTLKPLRKNSLTGDAGQEFLIENRFLFYLFTFGTELGNELFYITFFPWVMWNMDAFVSRRLIMVWVWVMYLGQCTKDVLGWSRPASPPVVKVEMFYNSEYSMPSTHAMSGTAIPFSLFFLTYGRWEYPFSLGFSLALCWCLVVCVSRIYMGMHSILDVIAGVLYSSLILLFFLPALDLIDSFNLTCRYAPLIIISFHLGLGLFSFNLDTWSTSRGDTAQILGTGAGVALASHVNHLLGLMPDPTPEQLPFTFPTLSTGLVGVAMLRFVLGVLALVATRALMKAITIPLVCWVFGVPSGDVRKARQHMEVELPYRYIVYGTVGFNVLFLVPLLFSYMQLSRVSSSRVRREEAAAKLVER
SIO_010081: sgpp1
subclass of: SO_0000673
so part of: sgpp1
location: join(194254..195132,205868..205957,214870..215417,216727..216787)
location: region:194254-216787:1
so has part: feature:194254-195132:1:exon
so has part: feature:205868-205957:1:exon
so has part: feature:214870-215417:1:exon
so has part: feature:216727-216787:1:exon

XP_010743436.2
type: Protein
SIO_000068: ncbiprotein

position:194254:1
position: 194254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216787:1
position: 216787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194254-195132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205868-205957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214870-215417:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216727-216787:1:exon

sgpp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: sgpp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingosine-1-phosphate phosphatase 1 isoform X2
translation: MEKSSRIVELYYYLQDPHHVARFQRICGVRGTFSRTVSAGSTATISSSSKEADRSHSHNNGACHHHSTAENEGESLAVMGAGEGEEVQTTAGVRKRTVESIGVKNSGEEAGNAAQNGAAVSAATAGGETVGVGSNGRSLAGATAAGQGATESEKTGPEKDCEGPQASSTLKPLRKNSLTGDAGQEFLIENRFLFYLFTFGTELGNELFYITFFPWVMWNMDAFVSRRLIMVWVWVMYLGQCTKDVLGWSRPASPPVVKVEMFYNSEYSMPSTHAMSGTAIPFSLFFLTYGRWEYPFSLGFSLALCWCLVVCVSRIYMGMHSILDVIAGVLYSSLILLFFLPALDLIDSFNLTCRYAPLIIISFHLGLGLFSFNLDTWSTSRGDTAQILGTGAGVALASHVNHLLGLMPDPTPEQLPFTFPTLSTGLVGVAMLRFVLGVLALVATRALMKAITIPLVCWVFGVPSGDVRKARQHMEVELPYRYIVYGTVGFNVLFLVPLLFSYMQLSREEAAAKLVER
SIO_010081: sgpp1
subclass of: SO_0000673
so part of: sgpp1
location: join(194254..195132,205868..205957,214870..215417,216751..216787)
location: region:194254-216787:1
so has part: feature:194254-195132:1:exon
so has part: feature:205868-205957:1:exon
so has part: feature:214870-215417:1:exon
so has part: feature:216751-216787:1:exon

XP_027134526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194254-195132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205868-205957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214870-215417:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216751-216787:1:exon

LOC113745763
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC113745763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 237652..240788
location: region:237652-240788:1
so has part: feature:237652-240788:1:exon
subclass of: SO_0000010

113745763
type: Gene
SIO_000068: ncbigene

position:237652:1
position: 237652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240788:1
position: 240788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237652-240788:1:exon

LOC113745763
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC113745763
product: trichohyalin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027278691.1
SIO_010081: LOC113745763
subclass of: SO_0000673
so part of: LOC113745763
location: 237652..240788
location: region:237652-240788:1
so has part: feature:237652-240788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237652-240788:1:exon

LOC113745763
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC113745763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trichohyalin-like
translation: MHHYSEVGEARCPEGILLKARWLKNHGGEREEITFRRPDEDYIKTADIHQLYQNSIVRDLNSKVLNRIHCDIENNRMIENKKIEKERAKHENMKHEQMMWLKNEEAQMREQQEFLSKRLQAQSVAQAQRRQISEKELEKRRQQHQKLKEQAMLNERIAQEARERSRQAEELAKSKKRELRARTEEIFEKRLDREREAQLVPLEEQRTELARLELEEKRRQRKTEQAEKFRQLQIPKQIVSDKLAAFKDEQAINVSLRERQRLERDVALIEAEREKQPAIDAERKAQVLESIAAHRQSAMWETETKEREEHQRAVEERKAQIAEHRLFLEHQRLRAQEIKEKNIQLIQDNEMMAAEKRARLEQQRKEEHDAAVRKAEEVQRRDERLQQHVAGELQKATEVLHQHRGRVILRPTHKLPPVHLQPRPPTRVPAVSPIDVPSTPSHLQRRPPRRVPAASPIYIPATPSHLQPHPPTCVPAASPIYVPSTTRRVPPFSSEGSNYVTALTQEPLPRLGRPRQRSNRTTISYLQPAGQNQVSSSYTRFPPI
SIO_010081: LOC113745763
subclass of: SO_0000673
so part of: LOC113745763
location: 237832..239466
location: region:237832-239466:1
so has part: feature:237832-239466:1:exon

XP_027134492.1
type: Protein
SIO_000068: ncbiprotein

position:237832:1
position: 237832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239466:1
position: 239466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237832-239466:1:exon

LOC109140908
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC109140908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 241942..244460
location: region:241942-244460:1
so has part: feature:241942-244460:1:exon
subclass of: SO_0000010

109140908
type: Gene
SIO_000068: ncbigene

position:241942:1
position: 241942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244460:1
position: 244460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241942-244460:1:exon

LOC109140908
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC109140908
product: dynein light chain 1, axonemal-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_027278740.1
SIO_010081: LOC109140908
subclass of: SO_0000673
so part of: LOC109140908
location: join(241942..241968,242328..242366,242818..242927,243858..243913,244005..244060,244305..244460)
location: region:241942-244460:1
so has part: feature:241942-241968:1:exon
so has part: feature:242328-242366:1:exon
so has part: feature:242818-242927:1:exon
so has part: feature:243858-243913:1:exon
so has part: feature:244005-244060:1:exon
so has part: feature:244305-244460:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:241942-241968:1:exon

position:241968:1
position: 241968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:242328-242366:1:exon

position:242328:1
position: 242328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242366:1
position: 242366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:242818-242927:1:exon

position:242818:1
position: 242818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242927:1
position: 242927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:243858-243913:1:exon

position:243858:1
position: 243858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243913:1
position: 243913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:244005-244060:1:exon

position:244005:1
position: 244005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244060:1
position: 244060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:244305-244460:1:exon

position:244305:1
position: 244305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109140908
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC109140908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein light chain 1, axonemal-like
translation: MDKPTTVKQAIAKWEKKSEQTASEATEVLLYGQIPPLEKLDASLSTLSNCEKLSLSTNCITKITNLGSLKNLKILSLGRNNIKTFDGLDAVSDTLEELWIFYNSIEQMKGIQGIMKCVVSDWVCLAPSGGHLEG
SIO_010081: LOC109140908
subclass of: SO_0000673
so part of: LOC109140908
location: join(241966..241968,242328..242366,242818..242927,243858..243913,244005..244060,244305..244445)
location: region:241966-244445:1
so has part: feature:241966-241968:1:exon
so has part: feature:242328-242366:1:exon
so has part: feature:242818-242927:1:exon
so has part: feature:243858-243913:1:exon
so has part: feature:244005-244060:1:exon
so has part: feature:244305-244445:1:exon

XP_027134541.1
type: Protein
SIO_000068: ncbiprotein

position:241966:1
position: 241966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244445:1
position: 244445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241966-241968:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242328-242366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242818-242927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243858-243913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244005-244060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244305-244445:1:exon

LOC113745779
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC113745779
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(244469..246158)
location: region:244469-246158:-1
so has part: feature:244469-246158:-1:exon
subclass of: SO_0000010

113745779
type: Gene
SIO_000068: ncbigene

position:244469:-1
position: 244469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246158:-1
position: 246158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244469-246158:-1:exon

LOC113745779
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC113745779
product: retinol dehydrogenase 12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_027278741.1
SIO_010081: LOC113745779
subclass of: SO_0000673
so part of: LOC113745779
location: complement(join(244469..244695,245092..245245,246065..246158))
location: region:244469-246158:-1
so has part: feature:246065-246158:-1:exon
so has part: feature:245092-245245:-1:exon
so has part: feature:244469-244695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246065-246158:-1:exon

position:246065:-1
position: 246065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245092-245245:-1:exon

position:245092:-1
position: 245092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245245:-1
position: 245245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:244469-244695:-1:exon

position:244695:-1
position: 244695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113745779
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC113745779
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 12-like
translation: MRKQHSVRSDYNHWAVMVNRDLGTGKYSWHFFKAYCNSKLCNVLFTHKLAKRLKGTNVTCYSVHPEKRVLFCEVGPPY
SIO_010081: LOC113745779
subclass of: SO_0000673
so part of: LOC113745779
location: complement(join(244655..244695,245092..245245,246065..246106))
location: region:244655-246106:-1
so has part: feature:246065-246106:-1:exon
so has part: feature:245092-245245:-1:exon
so has part: feature:244655-244695:-1:exon

XP_027134542.1
type: Protein
SIO_000068: ncbiprotein

position:244655:-1
position: 244655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246106:-1
position: 246106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246065-246106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245092-245245:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:244655-244695:-1:exon

LOC104924818
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104924818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(247022..252355)
location: region:247022-252355:-1
so has part: feature:247022-252355:-1:exon
subclass of: SO_0000010

104924818
type: Gene
SIO_000068: ncbigene

position:247022:-1
position: 247022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252355:-1
position: 252355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247022-252355:-1:exon

LOC104924818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104924818
product: dehydrogenase/reductase SDR family member 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010738281.3
SIO_010081: LOC104924818
subclass of: SO_0000673
so part of: LOC104924818
location: complement(join(247022..248000,248297..248450,249070..249242,249464..249587,250208..250326,252094..252355))
location: region:247022-252355:-1
so has part: feature:252094-252355:-1:exon
so has part: feature:250208-250326:-1:exon
so has part: feature:249464-249587:-1:exon
so has part: feature:249070-249242:-1:exon
so has part: feature:248297-248450:-1:exon
so has part: feature:247022-248000:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252094-252355:-1:exon

position:252094:-1
position: 252094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:250208-250326:-1:exon

position:250208:-1
position: 250208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250326:-1
position: 250326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:249464-249587:-1:exon

position:249464:-1
position: 249464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249587:-1
position: 249587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:249070-249242:-1:exon

position:249070:-1
position: 249070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249242:-1
position: 249242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:248297-248450:-1:exon

position:248297:-1
position: 248297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248450:-1
position: 248450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:247022-248000:-1:exon

position:248000:-1
position: 248000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104924818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104924818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrogenase/reductase SDR family member 13
translation: MFHLLLLAGVILGGYIILTQTLFKRSKNKGNAAMAGKTVIITGGNTGIGKATALHLARKGARVILACRNRDKAEAAIADIRQKTGSTDVLYMPLDLASLKSVRCFSETFLKSESRLDLLINNAGLVADGRTEDGFGIQFGVNHLGHFLLTCLLLERLKEAGGGRVVTLSSMAHRWGHIDFETVTVNKDLGTGKYSWQFFQAYCNSKLCNVLFTHELAKRLKGTNVTCYSVHPGVVRTELSRHVSLWQKIFIEPIAQLLFLDPETGAQTTLHCCLQEGIEPLSGRYFSCCAVQEVCAQARDDTVSRKLWEVSKTLCGLS
SIO_010081: LOC104924818
subclass of: SO_0000673
so part of: LOC104924818
location: complement(join(247741..248000,248297..248450,249070..249242,249464..249587,250208..250326,252094..252220))
location: region:247741-252220:-1
so has part: feature:252094-252220:-1:exon
so has part: feature:250208-250326:-1:exon
so has part: feature:249464-249587:-1:exon
so has part: feature:249070-249242:-1:exon
so has part: feature:248297-248450:-1:exon
so has part: feature:247741-248000:-1:exon

XP_010736583.1
type: Protein
SIO_000068: ncbiprotein

position:247741:-1
position: 247741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252220:-1
position: 252220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252094-252220:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:250208-250326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249464-249587:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249070-249242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248297-248450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247741-248000:-1:exon

nubpl
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: nubpl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 252907..259886
location: region:252907-259886:1
so has part: feature:252907-259886:1:exon
subclass of: SO_0000010

104924819
type: Gene
SIO_000068: ncbigene

position:252907:1
position: 252907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259886:1
position: 259886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252907-259886:1:exon

nubpl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: nubpl
product: nucleotide binding protein like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_010738282.3
SIO_010081: nubpl
subclass of: SO_0000673
so part of: nubpl
location: join(252907..253111,254731..254875,254988..255022,255203..255293,255442..255481,255574..255664,255768..255861,256670..256755,257581..257701,258784..258866,259235..259886)
location: region:252907-259886:1
so has part: feature:252907-253111:1:exon
so has part: feature:254731-254875:1:exon
so has part: feature:254988-255022:1:exon
so has part: feature:255203-255293:1:exon
so has part: feature:255442-255481:1:exon
so has part: feature:255574-255664:1:exon
so has part: feature:255768-255861:1:exon
so has part: feature:256670-256755:1:exon
so has part: feature:257581-257701:1:exon
so has part: feature:258784-258866:1:exon
so has part: feature:259235-259886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252907-253111:1:exon

position:253111:1
position: 253111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254731-254875:1:exon

position:254731:1
position: 254731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254875:1
position: 254875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:254988-255022:1:exon

position:254988:1
position: 254988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255022:1
position: 255022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:255203-255293:1:exon

position:255203:1
position: 255203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255293:1
position: 255293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:255442-255481:1:exon

position:255442:1
position: 255442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255481:1
position: 255481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:255574-255664:1:exon

position:255574:1
position: 255574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255664:1
position: 255664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:255768-255861:1:exon

position:255768:1
position: 255768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255861:1
position: 255861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:256670-256755:1:exon

position:256670:1
position: 256670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256755:1
position: 256755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:257581-257701:1:exon

position:257581:1
position: 257581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257701:1
position: 257701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:258784-258866:1:exon

position:258784:1
position: 258784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258866:1
position: 258866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:259235-259886:1:exon

position:259235:1
position: 259235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nubpl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: nubpl
product: nucleotide binding protein like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_027278739.1
SIO_010081: nubpl
subclass of: SO_0000673
so part of: nubpl
location: join(252911..253111,254731..254875,254988..255022,255203..255239,255442..255481,255574..255664,255768..255861,256670..256755,257581..257701,258784..258866,259235..259886)
location: region:252911-259886:1
so has part: feature:252911-253111:1:exon
so has part: feature:254731-254875:1:exon
so has part: feature:254988-255022:1:exon
so has part: feature:255203-255239:1:exon
so has part: feature:255442-255481:1:exon
so has part: feature:255574-255664:1:exon
so has part: feature:255768-255861:1:exon
so has part: feature:256670-256755:1:exon
so has part: feature:257581-257701:1:exon
so has part: feature:258784-258866:1:exon
so has part: feature:259235-259886:1:exon

position:252911:1
position: 252911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252911-253111:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254731-254875:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254988-255022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255203-255239:1:exon

position:255239:1
position: 255239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:255442-255481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255574-255664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255768-255861:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256670-256755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257581-257701:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:258784-258866:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259235-259886:1:exon

nubpl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: nubpl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iron-sulfur protein NUBPL isoform X1
translation: MALFTYSRLSHLLRIYANKPPVLRTAAEITHGPPCCVQLVRCQRTMDSKALQERQKQHMAKGLPKQKPITGVKRVIVVASGKGGVGKSTTAVNLALAVMANDPSKSVGLLDADVYGPSIPKLMNLKGNPELSDNNLMIPLINYGIPCMSMGFLVEDVAPIVWRGLMVMSAIDKLLRQVDWGSLDYLVVDMPPGTGDVQLSITQNIPIAGAVIVSTPQDIALLDARRGAEMFKKVNVPVLGLVQNMSVFQCPNCNHQTHIFGSDGARQLADTLGVQLLGDIPLHLNIREMSDRGKPVVVSSPDSPEAEAYRKVASAVIQRLEEINP
SIO_010081: nubpl
subclass of: SO_0000673
so part of: nubpl
location: join(252983..253111,254731..254875,254988..255022,255203..255293,255442..255481,255574..255664,255768..255861,256670..256755,257581..257701,258784..258866,259235..259297)
location: region:252983-259297:1
so has part: feature:252983-253111:1:exon
so has part: feature:254731-254875:1:exon
so has part: feature:254988-255022:1:exon
so has part: feature:255203-255293:1:exon
so has part: feature:255442-255481:1:exon
so has part: feature:255574-255664:1:exon
so has part: feature:255768-255861:1:exon
so has part: feature:256670-256755:1:exon
so has part: feature:257581-257701:1:exon
so has part: feature:258784-258866:1:exon
so has part: feature:259235-259297:1:exon

XP_010736584.3
type: Protein
SIO_000068: ncbiprotein

position:252983:1
position: 252983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259297:1
position: 259297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252983-253111:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254731-254875:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254988-255022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255203-255293:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255442-255481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255574-255664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255768-255861:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256670-256755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257581-257701:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:258784-258866:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259235-259297:1:exon

nubpl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: nubpl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iron-sulfur protein NUBPL isoform X2
translation: MALFTYSRLSHLLRIYANKPPVLRTAAEITHGPPCCVQLVRCQRTMDSKALQERQKQHMAKGLPKQKPITGVKRVIVVASGKGGVGKSTTAVNLALAVMANDPSKSVGLLDADVYDNLMIPLINYGIPCMSMGFLVEDVAPIVWRGLMVMSAIDKLLRQVDWGSLDYLVVDMPPGTGDVQLSITQNIPIAGAVIVSTPQDIALLDARRGAEMFKKVNVPVLGLVQNMSVFQCPNCNHQTHIFGSDGARQLADTLGVQLLGDIPLHLNIREMSDRGKPVVVSSPDSPEAEAYRKVASAVIQRLEEINP
SIO_010081: nubpl
subclass of: SO_0000673
so part of: nubpl
location: join(252983..253111,254731..254875,254988..255022,255203..255239,255442..255481,255574..255664,255768..255861,256670..256755,257581..257701,258784..258866,259235..259297)
location: region:252983-259297:1
so has part: feature:252983-253111:1:exon
so has part: feature:254731-254875:1:exon
so has part: feature:254988-255022:1:exon
so has part: feature:255203-255239:1:exon
so has part: feature:255442-255481:1:exon
so has part: feature:255574-255664:1:exon
so has part: feature:255768-255861:1:exon
so has part: feature:256670-256755:1:exon
so has part: feature:257581-257701:1:exon
so has part: feature:258784-258866:1:exon
so has part: feature:259235-259297:1:exon

XP_027134540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252983-253111:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254731-254875:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254988-255022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255203-255239:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255442-255481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255574-255664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255768-255861:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256670-256755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257581-257701:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:258784-258866:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259235-259297:1:exon

trnat-ugu
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: trnat-ugu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 271644..271717
location: region:271644-271717:1
so has part: feature:271644-271717:1:exon
subclass of: SO_0000663

109138853
type: Gene
SIO_000068: ncbigene

position:271644:1
position: 271644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271717:1
position: 271717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271644-271717:1:exon

trnat-ugu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 215358
gene: trnat-ugu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:271678..271680,aa:Thr,seq:tgt)
SIO_010081: trnat-ugu
subclass of: SO_0000673
so part of: trnat-ugu
location: 271644..271717
location: region:271644-271717:1
so has part: feature:271644-271717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271644-271717:1:exon

trnat-cgu
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: trnat-cgu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 272363..272436
location: region:272363-272436:1
so has part: feature:272363-272436:1:exon
subclass of: SO_0000663

109138852
type: Gene
SIO_000068: ncbigene

position:272363:1
position: 272363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272436:1
position: 272436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272363-272436:1:exon

trnat-cgu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 215358
gene: trnat-cgu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:272397..272399,aa:Thr,seq:cgt)
SIO_010081: trnat-cgu
subclass of: SO_0000673
so part of: trnat-cgu
location: 272363..272436
location: region:272363-272436:1
so has part: feature:272363-272436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272363-272436:1:exon

arhgap5
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: arhgap5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 296236..345188
location: region:296236-345188:1
so has part: feature:296236-345188:1:exon
subclass of: SO_0000010

104924820
type: Gene
SIO_000068: ncbigene

position:296236:1
position: 296236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345188:1
position: 345188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296236-345188:1:exon

arhgap5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: arhgap5
product: Rho GTPase activating protein 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_010738283.3
SIO_010081: arhgap5
subclass of: SO_0000673
so part of: arhgap5
location: join(296236..296613,301330..305279,307013..307166,334185..334262,339486..339617,342771..342876,344384..345188)
location: region:296236-345188:1
so has part: feature:296236-296613:1:exon
so has part: feature:301330-305279:1:exon
so has part: feature:307013-307166:1:exon
so has part: feature:334185-334262:1:exon
so has part: feature:339486-339617:1:exon
so has part: feature:342771-342876:1:exon
so has part: feature:344384-345188:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296236-296613:1:exon

position:296613:1
position: 296613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301330-305279:1:exon

position:301330:1
position: 301330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305279:1
position: 305279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:307013-307166:1:exon

position:307013:1
position: 307013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307166:1
position: 307166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:334185-334262:1:exon

position:334185:1
position: 334185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334262:1
position: 334262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:339486-339617:1:exon

position:339486:1
position: 339486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339617:1
position: 339617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:342771-342876:1:exon

position:342771:1
position: 342771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342876:1
position: 342876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:344384-345188:1:exon

position:344384:1
position: 344384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

arhgap5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: arhgap5
product: Rho GTPase activating protein 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019260390.2
SIO_010081: arhgap5
subclass of: SO_0000673
so part of: arhgap5
location: join(296236..296581,301330..305279,307013..307166,334185..334262,339486..339617,342771..342876,344384..345188)
location: region:296236-345188:1
so has part: feature:296236-296581:1:exon
so has part: feature:301330-305279:1:exon
so has part: feature:307013-307166:1:exon
so has part: feature:334185-334262:1:exon
so has part: feature:339486-339617:1:exon
so has part: feature:342771-342876:1:exon
so has part: feature:344384-345188:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296236-296581:1:exon

position:296581:1
position: 296581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301330-305279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307013-307166:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334185-334262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:339486-339617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342771-342876:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344384-345188:1:exon

arhgap5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: arhgap5
product: Rho GTPase activating protein 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_027278716.1
SIO_010081: arhgap5
subclass of: SO_0000673
so part of: arhgap5
location: join(296646..296894,301330..305279,307013..307166,334185..334262,339486..339617,342771..342876,344384..345188)
location: region:296646-345188:1
so has part: feature:296646-296894:1:exon
so has part: feature:301330-305279:1:exon
so has part: feature:307013-307166:1:exon
so has part: feature:334185-334262:1:exon
so has part: feature:339486-339617:1:exon
so has part: feature:342771-342876:1:exon
so has part: feature:344384-345188:1:exon

position:296646:1
position: 296646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296646-296894:1:exon

position:296894:1
position: 296894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301330-305279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307013-307166:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334185-334262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:339486-339617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342771-342876:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344384-345188:1:exon

arhgap5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: arhgap5
product: Rho GTPase activating protein 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_027278717.1
SIO_010081: arhgap5
subclass of: SO_0000673
so part of: arhgap5
location: join(297117..297188,301330..305279,307013..307166,334185..334262,339486..339617,342771..342876,344384..345188)
location: region:297117-345188:1
so has part: feature:297117-297188:1:exon
so has part: feature:301330-305279:1:exon
so has part: feature:307013-307166:1:exon
so has part: feature:334185-334262:1:exon
so has part: feature:339486-339617:1:exon
so has part: feature:342771-342876:1:exon
so has part: feature:344384-345188:1:exon

position:297117:1
position: 297117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297117-297188:1:exon

position:297188:1
position: 297188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301330-305279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307013-307166:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334185-334262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:339486-339617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342771-342876:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344384-345188:1:exon

arhgap5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: arhgap5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 5
translation: MAKNKDARPPTFAVSVVGLSGTEKEKGNCGVGKSCLCNRYVRPDADGYYLEHTSVLSTIDFGGRVVNNDHFLYWGEVSHRGDDGLDCKIQIIEQTEFIDDQTFLPHRSTNLQPYTKRAAATKLQSAEKLMYICTDQLGLEQDFDQKQMPDGKLNIDGFVLCIDVSKGCNRKFDDQMKFVNSLYSQIVKSKKPIVVAATKCDECVDQHLRDLQAFVASKKNLQLIETSARSNVNAELCFNALIQQLDKTRGKPKTVPYLEAYKIQRQLVASVTDRFEKLMLHTLRDYHTTWTTVVNNLKGQPDYDEFITLEGSRKARNMFTKHIAQLKQEHIKRRREEYLTTLPKTLNNLLNNLEEVEHLSWPEAQSVIRNRPDFQYWFVILEHTPWDETDHIDISDRRIPFDLLETPDGERIYHNHVQHLLSEKRRVEMKERFKKTLERVHFISAGQPWEEVMCFVMEDEAYKYITESDRRDVYCRHQQEIVERAKEDFQEMLFEHAELFYDLDLNATPSCDKMSEIHSVLNEEPRYRALQKLAPDRESLLLKHIGFVYHPTKETCLSGQNCVDLKVEQVLANRLVQLDHGRSNLYYNSANIDKINLCLLGREGLSQELANEIRAQSTDDEYTLDGKIYELELLPVDVNSTLLFSHTWVNTFKPHGCFCVFNSIESLNCIGDCIGRIRAEIAQSRRDRFAQPLPFILILANQRDSVCKNIPILRHQGQQLANKLQCTFVDIPSGAFPRKFTEFQIKQGLRAVLEGLKHNFDVLAPLPSIKDMSETDLRIVMCAMCWDPFSVDLILSPFLDSHCCSAGQPGQSNTLILDKIIGDSRRRIQVTVLSYHSAIGVRKDELVHGYILVYSAKRKASMATLRAFLAEVQDVIPVQMVAITDSQADFFENDAIKELMTEGEHIATEIAAKFTALYSLSQYHRQTEVFTPFFNEVLEKKPSIESSFLFDNSSRECTTGASEDVFPTSPHSHSPAYNTYYPESDDDNEAPPPYSPIGDDVQLLPTPSERAKYRIDLEGNEYPVHSTPVGDHERNHKVPPPVRPKPVLPKPNVKKLDPNLLKTIEAGMRSNRRTPRGPMTHAEDVEASENYADPVDTLLRSRGFHNDDIYAVPDDTHSRLVKIRNSFGGLHGLHGGGEEENGFDRKSQAGRRPSKYKHRSKILFSKTKAYQRRFHSDSDGEESGPATQKKKKGRAHRGSEEDPLLSPADPWKGGIDNPAITSDPEQEDKKMKKKKTPKTPKEPKKPKSSKPPKPLYPPTRRTWESNYFGVPLQNLVTSDRPIPLFIEKCVDYIERTGLTTEGLYRVSGNKTDQDNIQKQFDQDHSIDFVVMDVAVNAAAGALKAFFADLPDPLIPYSLHPELVEAAKIVDYIERLQVLREIVKKFPSVNYQVFKYIITHLNRVSQHSKTTLMTADNLSICFWPTLMRPDFENKDTLSTTKLNQAVIESFIVQSDYFFHGGEVAESSSSEGTPPPHCHNMVEALLPLQLPPPLQPQQIQHTLHPDPLI
SIO_010081: arhgap5
subclass of: SO_0000673
so part of: arhgap5
location: join(301545..305279,307013..307166,334185..334262,339486..339617,342771..342876,344384..344702)
location: region:301545-344702:1
so has part: feature:301545-305279:1:exon
so has part: feature:307013-307166:1:exon
so has part: feature:334185-334262:1:exon
so has part: feature:339486-339617:1:exon
so has part: feature:342771-342876:1:exon
so has part: feature:344384-344702:1:exon

XP_019115935.1
type: Protein
SIO_000068: ncbiprotein

position:301545:1
position: 301545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344702:1
position: 344702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301545-305279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:307013-307166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334185-334262:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339486-339617:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342771-342876:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344384-344702:1:exon

arhgap5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: arhgap5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 5
translation: MAKNKDARPPTFAVSVVGLSGTEKEKGNCGVGKSCLCNRYVRPDADGYYLEHTSVLSTIDFGGRVVNNDHFLYWGEVSHRGDDGLDCKIQIIEQTEFIDDQTFLPHRSTNLQPYTKRAAATKLQSAEKLMYICTDQLGLEQDFDQKQMPDGKLNIDGFVLCIDVSKGCNRKFDDQMKFVNSLYSQIVKSKKPIVVAATKCDECVDQHLRDLQAFVASKKNLQLIETSARSNVNAELCFNALIQQLDKTRGKPKTVPYLEAYKIQRQLVASVTDRFEKLMLHTLRDYHTTWTTVVNNLKGQPDYDEFITLEGSRKARNMFTKHIAQLKQEHIKRRREEYLTTLPKTLNNLLNNLEEVEHLSWPEAQSVIRNRPDFQYWFVILEHTPWDETDHIDISDRRIPFDLLETPDGERIYHNHVQHLLSEKRRVEMKERFKKTLERVHFISAGQPWEEVMCFVMEDEAYKYITESDRRDVYCRHQQEIVERAKEDFQEMLFEHAELFYDLDLNATPSCDKMSEIHSVLNEEPRYRALQKLAPDRESLLLKHIGFVYHPTKETCLSGQNCVDLKVEQVLANRLVQLDHGRSNLYYNSANIDKINLCLLGREGLSQELANEIRAQSTDDEYTLDGKIYELELLPVDVNSTLLFSHTWVNTFKPHGCFCVFNSIESLNCIGDCIGRIRAEIAQSRRDRFAQPLPFILILANQRDSVCKNIPILRHQGQQLANKLQCTFVDIPSGAFPRKFTEFQIKQGLRAVLEGLKHNFDVLAPLPSIKDMSETDLRIVMCAMCWDPFSVDLILSPFLDSHCCSAGQPGQSNTLILDKIIGDSRRRIQVTVLSYHSAIGVRKDELVHGYILVYSAKRKASMATLRAFLAEVQDVIPVQMVAITDSQADFFENDAIKELMTEGEHIATEIAAKFTALYSLSQYHRQTEVFTPFFNEVLEKKPSIESSFLFDNSSRECTTGASEDVFPTSPHSHSPAYNTYYPESDDDNEAPPPYSPIGDDVQLLPTPSERAKYRIDLEGNEYPVHSTPVGDHERNHKVPPPVRPKPVLPKPNVKKLDPNLLKTIEAGMRSNRRTPRGPMTHAEDVEASENYADPVDTLLRSRGFHNDDIYAVPDDTHSRLVKIRNSFGGLHGLHGGGEEENGFDRKSQAGRRPSKYKHRSKILFSKTKAYQRRFHSDSDGEESGPATQKKKKGRAHRGSEEDPLLSPADPWKGGIDNPAITSDPEQEDKKMKKKKTPKTPKEPKKPKSSKPPKPLYPPTRRTWESNYFGVPLQNLVTSDRPIPLFIEKCVDYIERTGLTTEGLYRVSGNKTDQDNIQKQFDQDHSIDFVVMDVAVNAAAGALKAFFADLPDPLIPYSLHPELVEAAKIVDYIERLQVLREIVKKFPSVNYQVFKYIITHLNRVSQHSKTTLMTADNLSICFWPTLMRPDFENKDTLSTTKLNQAVIESFIVQSDYFFHGGEVAESSSSEGTPPPHCHNMVEALLPLQLPPPLQPQQIQHTLHPDPLI
SIO_010081: arhgap5
subclass of: SO_0000673
so part of: arhgap5
location: join(301545..305279,307013..307166,334185..334262,339486..339617,342771..342876,344384..344702)
location: region:301545-344702:1
so has part: feature:301545-305279:1:exon
so has part: feature:307013-307166:1:exon
so has part: feature:334185-334262:1:exon
so has part: feature:339486-339617:1:exon
so has part: feature:342771-342876:1:exon
so has part: feature:344384-344702:1:exon

XP_027134517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301545-305279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:307013-307166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334185-334262:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339486-339617:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342771-342876:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344384-344702:1:exon

arhgap5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: arhgap5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 5
translation: MAKNKDARPPTFAVSVVGLSGTEKEKGNCGVGKSCLCNRYVRPDADGYYLEHTSVLSTIDFGGRVVNNDHFLYWGEVSHRGDDGLDCKIQIIEQTEFIDDQTFLPHRSTNLQPYTKRAAATKLQSAEKLMYICTDQLGLEQDFDQKQMPDGKLNIDGFVLCIDVSKGCNRKFDDQMKFVNSLYSQIVKSKKPIVVAATKCDECVDQHLRDLQAFVASKKNLQLIETSARSNVNAELCFNALIQQLDKTRGKPKTVPYLEAYKIQRQLVASVTDRFEKLMLHTLRDYHTTWTTVVNNLKGQPDYDEFITLEGSRKARNMFTKHIAQLKQEHIKRRREEYLTTLPKTLNNLLNNLEEVEHLSWPEAQSVIRNRPDFQYWFVILEHTPWDETDHIDISDRRIPFDLLETPDGERIYHNHVQHLLSEKRRVEMKERFKKTLERVHFISAGQPWEEVMCFVMEDEAYKYITESDRRDVYCRHQQEIVERAKEDFQEMLFEHAELFYDLDLNATPSCDKMSEIHSVLNEEPRYRALQKLAPDRESLLLKHIGFVYHPTKETCLSGQNCVDLKVEQVLANRLVQLDHGRSNLYYNSANIDKINLCLLGREGLSQELANEIRAQSTDDEYTLDGKIYELELLPVDVNSTLLFSHTWVNTFKPHGCFCVFNSIESLNCIGDCIGRIRAEIAQSRRDRFAQPLPFILILANQRDSVCKNIPILRHQGQQLANKLQCTFVDIPSGAFPRKFTEFQIKQGLRAVLEGLKHNFDVLAPLPSIKDMSETDLRIVMCAMCWDPFSVDLILSPFLDSHCCSAGQPGQSNTLILDKIIGDSRRRIQVTVLSYHSAIGVRKDELVHGYILVYSAKRKASMATLRAFLAEVQDVIPVQMVAITDSQADFFENDAIKELMTEGEHIATEIAAKFTALYSLSQYHRQTEVFTPFFNEVLEKKPSIESSFLFDNSSRECTTGASEDVFPTSPHSHSPAYNTYYPESDDDNEAPPPYSPIGDDVQLLPTPSERAKYRIDLEGNEYPVHSTPVGDHERNHKVPPPVRPKPVLPKPNVKKLDPNLLKTIEAGMRSNRRTPRGPMTHAEDVEASENYADPVDTLLRSRGFHNDDIYAVPDDTHSRLVKIRNSFGGLHGLHGGGEEENGFDRKSQAGRRPSKYKHRSKILFSKTKAYQRRFHSDSDGEESGPATQKKKKGRAHRGSEEDPLLSPADPWKGGIDNPAITSDPEQEDKKMKKKKTPKTPKEPKKPKSSKPPKPLYPPTRRTWESNYFGVPLQNLVTSDRPIPLFIEKCVDYIERTGLTTEGLYRVSGNKTDQDNIQKQFDQDHSIDFVVMDVAVNAAAGALKAFFADLPDPLIPYSLHPELVEAAKIVDYIERLQVLREIVKKFPSVNYQVFKYIITHLNRVSQHSKTTLMTADNLSICFWPTLMRPDFENKDTLSTTKLNQAVIESFIVQSDYFFHGGEVAESSSSEGTPPPHCHNMVEALLPLQLPPPLQPQQIQHTLHPDPLI
SIO_010081: arhgap5
subclass of: SO_0000673
so part of: arhgap5
location: join(301545..305279,307013..307166,334185..334262,339486..339617,342771..342876,344384..344702)
location: region:301545-344702:1
so has part: feature:301545-305279:1:exon
so has part: feature:307013-307166:1:exon
so has part: feature:334185-334262:1:exon
so has part: feature:339486-339617:1:exon
so has part: feature:342771-342876:1:exon
so has part: feature:344384-344702:1:exon

XP_027134518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301545-305279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:307013-307166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334185-334262:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339486-339617:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342771-342876:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344384-344702:1:exon

arhgap5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: arhgap5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 5
translation: MAKNKDARPPTFAVSVVGLSGTEKEKGNCGVGKSCLCNRYVRPDADGYYLEHTSVLSTIDFGGRVVNNDHFLYWGEVSHRGDDGLDCKIQIIEQTEFIDDQTFLPHRSTNLQPYTKRAAATKLQSAEKLMYICTDQLGLEQDFDQKQMPDGKLNIDGFVLCIDVSKGCNRKFDDQMKFVNSLYSQIVKSKKPIVVAATKCDECVDQHLRDLQAFVASKKNLQLIETSARSNVNAELCFNALIQQLDKTRGKPKTVPYLEAYKIQRQLVASVTDRFEKLMLHTLRDYHTTWTTVVNNLKGQPDYDEFITLEGSRKARNMFTKHIAQLKQEHIKRRREEYLTTLPKTLNNLLNNLEEVEHLSWPEAQSVIRNRPDFQYWFVILEHTPWDETDHIDISDRRIPFDLLETPDGERIYHNHVQHLLSEKRRVEMKERFKKTLERVHFISAGQPWEEVMCFVMEDEAYKYITESDRRDVYCRHQQEIVERAKEDFQEMLFEHAELFYDLDLNATPSCDKMSEIHSVLNEEPRYRALQKLAPDRESLLLKHIGFVYHPTKETCLSGQNCVDLKVEQVLANRLVQLDHGRSNLYYNSANIDKINLCLLGREGLSQELANEIRAQSTDDEYTLDGKIYELELLPVDVNSTLLFSHTWVNTFKPHGCFCVFNSIESLNCIGDCIGRIRAEIAQSRRDRFAQPLPFILILANQRDSVCKNIPILRHQGQQLANKLQCTFVDIPSGAFPRKFTEFQIKQGLRAVLEGLKHNFDVLAPLPSIKDMSETDLRIVMCAMCWDPFSVDLILSPFLDSHCCSAGQPGQSNTLILDKIIGDSRRRIQVTVLSYHSAIGVRKDELVHGYILVYSAKRKASMATLRAFLAEVQDVIPVQMVAITDSQADFFENDAIKELMTEGEHIATEIAAKFTALYSLSQYHRQTEVFTPFFNEVLEKKPSIESSFLFDNSSRECTTGASEDVFPTSPHSHSPAYNTYYPESDDDNEAPPPYSPIGDDVQLLPTPSERAKYRIDLEGNEYPVHSTPVGDHERNHKVPPPVRPKPVLPKPNVKKLDPNLLKTIEAGMRSNRRTPRGPMTHAEDVEASENYADPVDTLLRSRGFHNDDIYAVPDDTHSRLVKIRNSFGGLHGLHGGGEEENGFDRKSQAGRRPSKYKHRSKILFSKTKAYQRRFHSDSDGEESGPATQKKKKGRAHRGSEEDPLLSPADPWKGGIDNPAITSDPEQEDKKMKKKKTPKTPKEPKKPKSSKPPKPLYPPTRRTWESNYFGVPLQNLVTSDRPIPLFIEKCVDYIERTGLTTEGLYRVSGNKTDQDNIQKQFDQDHSIDFVVMDVAVNAAAGALKAFFADLPDPLIPYSLHPELVEAAKIVDYIERLQVLREIVKKFPSVNYQVFKYIITHLNRVSQHSKTTLMTADNLSICFWPTLMRPDFENKDTLSTTKLNQAVIESFIVQSDYFFHGGEVAESSSSEGTPPPHCHNMVEALLPLQLPPPLQPQQIQHTLHPDPLI
SIO_010081: arhgap5
subclass of: SO_0000673
so part of: arhgap5
location: join(301545..305279,307013..307166,334185..334262,339486..339617,342771..342876,344384..344702)
location: region:301545-344702:1
so has part: feature:301545-305279:1:exon
so has part: feature:307013-307166:1:exon
so has part: feature:334185-334262:1:exon
so has part: feature:339486-339617:1:exon
so has part: feature:342771-342876:1:exon
so has part: feature:344384-344702:1:exon

XP_010736585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301545-305279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:307013-307166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334185-334262:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339486-339617:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342771-342876:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344384-344702:1:exon

akap6
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: akap6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 354288..563199
location: region:354288-563199:1
so has part: feature:354288-563199:1:exon
subclass of: SO_0000010

104924825
type: Gene
SIO_000068: ncbigene

position:354288:1
position: 354288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563199:1
position: 563199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354288-563199:1:exon

akap6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: akap6
product: A-kinase anchoring protein 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019260384.2
SIO_010081: akap6
subclass of: SO_0000673
so part of: akap6
location: join(354288..354676,383213..383521,384100..384271,402206..402315,403746..403887,404269..404892,405508..405864,406161..406301,406410..406568,406662..406922,420783..420905,434026..434122,435301..435503,470663..470793,480670..480790,508529..508675,516559..516822,535522..535605,535897..536049,547528..550572,551378..552685,556299..556391,559031..563199)
location: region:354288-563199:1
so has part: feature:354288-354676:1:exon
so has part: feature:383213-383521:1:exon
so has part: feature:384100-384271:1:exon
so has part: feature:402206-402315:1:exon
so has part: feature:403746-403887:1:exon
so has part: feature:404269-404892:1:exon
so has part: feature:405508-405864:1:exon
so has part: feature:406161-406301:1:exon
so has part: feature:406410-406568:1:exon
so has part: feature:406662-406922:1:exon
so has part: feature:420783-420905:1:exon
so has part: feature:434026-434122:1:exon
so has part: feature:435301-435503:1:exon
so has part: feature:470663-470793:1:exon
so has part: feature:480670-480790:1:exon
so has part: feature:508529-508675:1:exon
so has part: feature:516559-516822:1:exon
so has part: feature:535522-535605:1:exon
so has part: feature:535897-536049:1:exon
so has part: feature:547528-550572:1:exon
so has part: feature:551378-552685:1:exon
so has part: feature:556299-556391:1:exon
so has part: feature:559031-563199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354288-354676:1:exon

position:354676:1
position: 354676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:383213-383521:1:exon

position:383213:1
position: 383213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383521:1
position: 383521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:384100-384271:1:exon

position:384100:1
position: 384100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384271:1
position: 384271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:402206-402315:1:exon

position:402206:1
position: 402206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402315:1
position: 402315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:403746-403887:1:exon

position:403746:1
position: 403746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403887:1
position: 403887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:404269-404892:1:exon

position:404269:1
position: 404269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404892:1
position: 404892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:405508-405864:1:exon

position:405508:1
position: 405508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405864:1
position: 405864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:406161-406301:1:exon

position:406161:1
position: 406161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406301:1
position: 406301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:406410-406568:1:exon

position:406410:1
position: 406410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406568:1
position: 406568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:406662-406922:1:exon

position:406662:1
position: 406662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406922:1
position: 406922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:420783-420905:1:exon

position:420783:1
position: 420783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420905:1
position: 420905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:434026-434122:1:exon

position:434026:1
position: 434026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434122:1
position: 434122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:435301-435503:1:exon

position:435301:1
position: 435301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435503:1
position: 435503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:470663-470793:1:exon

position:470663:1
position: 470663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470793:1
position: 470793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:480670-480790:1:exon

position:480670:1
position: 480670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480790:1
position: 480790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:508529-508675:1:exon

position:508529:1
position: 508529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508675:1
position: 508675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:516559-516822:1:exon

position:516559:1
position: 516559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516822:1
position: 516822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:535522-535605:1:exon

position:535522:1
position: 535522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535605:1
position: 535605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:535897-536049:1:exon

position:535897:1
position: 535897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536049:1
position: 536049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:547528-550572:1:exon

position:547528:1
position: 547528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550572:1
position: 550572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:551378-552685:1:exon

position:551378:1
position: 551378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552685:1
position: 552685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:556299-556391:1:exon

position:556299:1
position: 556299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556391:1
position: 556391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:559031-563199:1:exon

position:559031:1
position: 559031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

akap6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: akap6
product: A-kinase anchoring protein 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019260387.2
SIO_010081: akap6
subclass of: SO_0000673
so part of: akap6
location: join(354288..354676,383213..383521,384100..384271,402206..402315,403746..403887,404269..404892,405508..405864,406170..406301,406410..406568,406662..406922,420783..420905,434026..434122,435301..435503,470663..470793,480670..480790,508529..508675,516559..516822,535522..535605,535897..536049,547528..550572,551378..552685,556299..556391,559031..563199)
location: region:354288-563199:1
so has part: feature:354288-354676:1:exon
so has part: feature:383213-383521:1:exon
so has part: feature:384100-384271:1:exon
so has part: feature:402206-402315:1:exon
so has part: feature:403746-403887:1:exon
so has part: feature:404269-404892:1:exon
so has part: feature:405508-405864:1:exon
so has part: feature:406170-406301:1:exon
so has part: feature:406410-406568:1:exon
so has part: feature:406662-406922:1:exon
so has part: feature:420783-420905:1:exon
so has part: feature:434026-434122:1:exon
so has part: feature:435301-435503:1:exon
so has part: feature:470663-470793:1:exon
so has part: feature:480670-480790:1:exon
so has part: feature:508529-508675:1:exon
so has part: feature:516559-516822:1:exon
so has part: feature:535522-535605:1:exon
so has part: feature:535897-536049:1:exon
so has part: feature:547528-550572:1:exon
so has part: feature:551378-552685:1:exon
so has part: feature:556299-556391:1:exon
so has part: feature:559031-563199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354288-354676:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383213-383521:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384100-384271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:402206-402315:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:403746-403887:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404269-404892:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405508-405864:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:406170-406301:1:exon

position:406170:1
position: 406170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:406410-406568:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:406662-406922:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:420783-420905:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:434026-434122:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:435301-435503:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:470663-470793:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:480670-480790:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:508529-508675:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:516559-516822:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:535522-535605:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:535897-536049:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:547528-550572:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:551378-552685:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:556299-556391:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:559031-563199:1:exon

akap6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: akap6
product: A-kinase anchoring protein 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_019260385.2
SIO_010081: akap6
subclass of: SO_0000673
so part of: akap6
location: join(374351..374464,383213..383521,384100..384271,402206..402315,403746..403887,404269..404892,405508..405864,406161..406301,406410..406568,406662..406922,420783..420905,434026..434122,435301..435503,470663..470793,480670..480790,508529..508675,516559..516822,535522..535605,535897..536049,547528..550572,551378..552685,556299..556391,559031..563199)
location: region:374351-563199:1
so has part: feature:374351-374464:1:exon
so has part: feature:383213-383521:1:exon
so has part: feature:384100-384271:1:exon
so has part: feature:402206-402315:1:exon
so has part: feature:403746-403887:1:exon
so has part: feature:404269-404892:1:exon
so has part: feature:405508-405864:1:exon
so has part: feature:406161-406301:1:exon
so has part: feature:406410-406568:1:exon
so has part: feature:406662-406922:1:exon
so has part: feature:420783-420905:1:exon
so has part: feature:434026-434122:1:exon
so has part: feature:435301-435503:1:exon
so has part: feature:470663-470793:1:exon
so has part: feature:480670-480790:1:exon
so has part: feature:508529-508675:1:exon
so has part: feature:516559-516822:1:exon
so has part: feature:535522-535605:1:exon
so has part: feature:535897-536049:1:exon
so has part: feature:547528-550572:1:exon
so has part: feature:551378-552685:1:exon
so has part: feature:556299-556391:1:exon
so has part: feature:559031-563199:1:exon

position:374351:1
position: 374351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374351-374464:1:exon

position:374464:1
position: 374464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:383213-383521:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384100-384271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:402206-402315:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:403746-403887:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404269-404892:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405508-405864:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:406161-406301:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:406410-406568:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:406662-406922:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:420783-420905:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:434026-434122:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:435301-435503:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:470663-470793:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:480670-480790:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:508529-508675:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:516559-516822:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:535522-535605:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:535897-536049:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:547528-550572:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:551378-552685:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:556299-556391:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:559031-563199:1:exon

akap6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: akap6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein 6 isoform X1
translation: MSIVALSPVAPEPPSPMITSITPVTPTMDPDTSTSSSVVTTIPLSPDLEHQSQDGASSPGPGPSQGSLTGGGLHLSRDPSRRSKKPPPLHTGADWKVVLHLPEIETWLRATSDRVTQLTHSVGQDSDNRHVDVHLVQLKDICEDISDHVEQIHALLETEFSLKLLSYSVNIIVDIRTVQLLWHQLRVSVLVLKERLLQGLQDSNGNFTRQTDILQAFSEDQHQTRLDALTEVDDCGQLTIRCSQDYFSLDCGITAFELSDYSPGDEPEARGVEGDGDDPSQELSQTQNSNLELEAEESEESRLSNHEHHNSLPELITSSDSTNHNYSPSFTAPDHSESAKRPLQGVSHSTEVSPTQPSLPKRAALFSDGGTRVEDSRGGLGNVNLVSGLQLQAELSRSTPSLMDPPDRSKFWLELDSVYPENVSQSYESLQVMNGHNLQRNHVSSRQVGHSQGSVQRPLTELRSSSGPRPTTNAPPPLQDPMSQDEISKQMERTQKETHAHSEGDSDSSLPSPMREQFLSSDLEASGEESDPRPPQGKTAVWIVKRQGQKGAQVSSKASPEKEHWYGSEEFLALPAQLRKTEMLAMKLESLAHSIPLRPGGCDSTEEGLQDVDDWDLTELNTDWDVEESGDNMSSVRESGDDVPSPLPPLLPYRRNLISRFSSTSSSDIAPSLDESIESGPLSDLQSEDDEGQRSADRRMQLTVPLVDVRGRGSLVHQLLEDIQSQDKDPDVWKKIECFVQQLDGFISWLQEALDSTENWTQPRQELDSLRAYLDTHLSFKLNVDSHGALKESIMEEGKALLTVITCHQSGLKDILHMVSSQWDQLQRQIRRQHGWMLRALRCIQARLLYTSQSHESFTASGEPSANRQAPCPVDGLKAELISSQCEAQRATLEQMAIKLSTLQYPSPASRRHCSQLARNNSLQEFEADYQELWDWLMDMDAMVTDSHQLMMSEEQRHHLFKSSHAELMMMESRKTGLLGRAESLKRSGTELSADFHRKIHNLTHTWTQLEKILSEHSGPASSQQNQSANRNSLQVGGRADAMENPRSALSPLTNSLLEQLEARIKELKAWLRDTELLIFNSCLRQQHKDASEQLQSFKSLCSEVRARRRGVASVLKLCQKLLQQSQSGPMAEVGPEAEQHWEALQLLSINLERRWEAIVMQALQWQNRLKRELGEQQVPGNFLEPGLADLHQTSPLPGGPVAPPPDDSWEWDETDMTITEAEPQEVPEPDLMHNLPTEPTLPLDSVLSNGNQPDRNQTNAPGCQYPEMMGGSTSDVQPNVMSQTLPPNNNNIYQVYSLHSVELYRQPPFPHTSSLLHKTKSGKRKQHLLLKSLSKDSSFSSIESLPDLLGGLMSDSQGGDRMTRYQDGVSEKEGGRGSGQSRSSRRSESESGIVSDTGDMETVINSEIQGEEENKEEKEENEQRKDETLDGSNLALHKDNVSRCKERRTKTEESMKEKRWRTDEPRGDSRRNKEEEKRRKHRRGGGEAVEILINGRGILTPADSDSDFEVGGLGVDSSKPFMSRSDITEFKVDQFNGLETPPALSRRASSPELSQGSSLESLLALGVELFPSKDLLHRRASLESCLVPCRGTEGDTGGSLASLGELDLGQSIEVEGGQPGKEKNNESMQGEPSSGELSRRTLDLLKRLENIQSPLAAKMTRSVSDMTLRSTSPQRLPASPSLGGRHNPLCGIPGFSRKGPPSLINESSATASLTELSSTEDSSLGSEDFAMLRNQRHLFLDPSMAANANSSSYRKRCHGNSRGGHGMDEADAASLSLVVNVSCTSACTDEDEDDSDLLSSSTLTLTEEELGVRDGEDEEEARLSGASSGNEDDEDDDEEEMEGSYVLGLEYMKRELQTWIRSPRTSSSSSSKTEAGLRDELQCGTNLSSTFTSSSQSKEQHSFLNRTAPKLIETNTNGVNNKTKRDHKEEQEQEENRRNATRSYISQFVDDVENGNVDQSCLKGKDEDDELLREESSVFTKKGESLRESYVFTKTGESV…
SIO_010081: akap6
subclass of: SO_0000673
so part of: akap6
location: join(383277..383521,384100..384271,402206..402315,403746..403887,404269..404892,405508..405864,406161..406301,406410..406568,406662..406922,420783..420905,434026..434122,435301..435503,470663..470793,480670..480790,508529..508675,516559..516822,535522..535605,535897..536049,547528..550572,551378..552685,556299..556391,559031..559075)
location: region:383277-559075:1
so has part: feature:383277-383521:1:exon
so has part: feature:384100-384271:1:exon
so has part: feature:402206-402315:1:exon
so has part: feature:403746-403887:1:exon
so has part: feature:404269-404892:1:exon
so has part: feature:405508-405864:1:exon
so has part: feature:406161-406301:1:exon
so has part: feature:406410-406568:1:exon
so has part: feature:406662-406922:1:exon
so has part: feature:420783-420905:1:exon
so has part: feature:434026-434122:1:exon
so has part: feature:435301-435503:1:exon
so has part: feature:470663-470793:1:exon
so has part: feature:480670-480790:1:exon
so has part: feature:508529-508675:1:exon
so has part: feature:516559-516822:1:exon
so has part: feature:535522-535605:1:exon
so has part: feature:535897-536049:1:exon
so has part: feature:547528-550572:1:exon
so has part: feature:551378-552685:1:exon
so has part: feature:556299-556391:1:exon
so has part: feature:559031-559075:1:exon

XP_019115929.2
type: Protein
SIO_000068: ncbiprotein

position:383277:1
position: 383277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559075:1
position: 559075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383277-383521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384100-384271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:402206-402315:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403746-403887:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404269-404892:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405508-405864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406161-406301:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:406410-406568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:406662-406922:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:420783-420905:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:434026-434122:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:435301-435503:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:470663-470793:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:480670-480790:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:508529-508675:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:516559-516822:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:535522-535605:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:535897-536049:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:547528-550572:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:551378-552685:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:556299-556391:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:559031-559075:1:exon

akap6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: akap6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein 6 isoform X1
translation: MSIVALSPVAPEPPSPMITSITPVTPTMDPDTSTSSSVVTTIPLSPDLEHQSQDGASSPGPGPSQGSLTGGGLHLSRDPSRRSKKPPPLHTGADWKVVLHLPEIETWLRATSDRVTQLTHSVGQDSDNRHVDVHLVQLKDICEDISDHVEQIHALLETEFSLKLLSYSVNIIVDIRTVQLLWHQLRVSVLVLKERLLQGLQDSNGNFTRQTDILQAFSEDQHQTRLDALTEVDDCGQLTIRCSQDYFSLDCGITAFELSDYSPGDEPEARGVEGDGDDPSQELSQTQNSNLELEAEESEESRLSNHEHHNSLPELITSSDSTNHNYSPSFTAPDHSESAKRPLQGVSHSTEVSPTQPSLPKRAALFSDGGTRVEDSRGGLGNVNLVSGLQLQAELSRSTPSLMDPPDRSKFWLELDSVYPENVSQSYESLQVMNGHNLQRNHVSSRQVGHSQGSVQRPLTELRSSSGPRPTTNAPPPLQDPMSQDEISKQMERTQKETHAHSEGDSDSSLPSPMREQFLSSDLEASGEESDPRPPQGKTAVWIVKRQGQKGAQVSSKASPEKEHWYGSEEFLALPAQLRKTEMLAMKLESLAHSIPLRPGGCDSTEEGLQDVDDWDLTELNTDWDVEESGDNMSSVRESGDDVPSPLPPLLPYRRNLISRFSSTSSSDIAPSLDESIESGPLSDLQSEDDEGQRSADRRMQLTVPLVDVRGRGSLVHQLLEDIQSQDKDPDVWKKIECFVQQLDGFISWLQEALDSTENWTQPRQELDSLRAYLDTHLSFKLNVDSHGALKESIMEEGKALLTVITCHQSGLKDILHMVSSQWDQLQRQIRRQHGWMLRALRCIQARLLYTSQSHESFTASGEPSANRQAPCPVDGLKAELISSQCEAQRATLEQMAIKLSTLQYPSPASRRHCSQLARNNSLQEFEADYQELWDWLMDMDAMVTDSHQLMMSEEQRHHLFKSSHAELMMMESRKTGLLGRAESLKRSGTELSADFHRKIHNLTHTWTQLEKILSEHSGPASSQQNQSANRNSLQVGGRADAMENPRSALSPLTNSLLEQLEARIKELKAWLRDTELLIFNSCLRQQHKDASEQLQSFKSLCSEVRARRRGVASVLKLCQKLLQQSQSGPMAEVGPEAEQHWEALQLLSINLERRWEAIVMQALQWQNRLKRELGEQQVPGNFLEPGLADLHQTSPLPGGPVAPPPDDSWEWDETDMTITEAEPQEVPEPDLMHNLPTEPTLPLDSVLSNGNQPDRNQTNAPGCQYPEMMGGSTSDVQPNVMSQTLPPNNNNIYQVYSLHSVELYRQPPFPHTSSLLHKTKSGKRKQHLLLKSLSKDSSFSSIESLPDLLGGLMSDSQGGDRMTRYQDGVSEKEGGRGSGQSRSSRRSESESGIVSDTGDMETVINSEIQGEEENKEEKEENEQRKDETLDGSNLALHKDNVSRCKERRTKTEESMKEKRWRTDEPRGDSRRNKEEEKRRKHRRGGGEAVEILINGRGILTPADSDSDFEVGGLGVDSSKPFMSRSDITEFKVDQFNGLETPPALSRRASSPELSQGSSLESLLALGVELFPSKDLLHRRASLESCLVPCRGTEGDTGGSLASLGELDLGQSIEVEGGQPGKEKNNESMQGEPSSGELSRRTLDLLKRLENIQSPLAAKMTRSVSDMTLRSTSPQRLPASPSLGGRHNPLCGIPGFSRKGPPSLINESSATASLTELSSTEDSSLGSEDFAMLRNQRHLFLDPSMAANANSSSYRKRCHGNSRGGHGMDEADAASLSLVVNVSCTSACTDEDEDDSDLLSSSTLTLTEEELGVRDGEDEEEARLSGASSGNEDDEDDDEEEMEGSYVLGLEYMKRELQTWIRSPRTSSSSSSKTEAGLRDELQCGTNLSSTFTSSSQSKEQHSFLNRTAPKLIETNTNGVNNKTKRDHKEEQEQEENRRNATRSYISQFVDDVENGNVDQSCLKGKDEDDELLREESSVFTKKGESLRESYVFTKTGESV…
SIO_010081: akap6
subclass of: SO_0000673
so part of: akap6
location: join(383277..383521,384100..384271,402206..402315,403746..403887,404269..404892,405508..405864,406161..406301,406410..406568,406662..406922,420783..420905,434026..434122,435301..435503,470663..470793,480670..480790,508529..508675,516559..516822,535522..535605,535897..536049,547528..550572,551378..552685,556299..556391,559031..559075)
location: region:383277-559075:1
so has part: feature:383277-383521:1:exon
so has part: feature:384100-384271:1:exon
so has part: feature:402206-402315:1:exon
so has part: feature:403746-403887:1:exon
so has part: feature:404269-404892:1:exon
so has part: feature:405508-405864:1:exon
so has part: feature:406161-406301:1:exon
so has part: feature:406410-406568:1:exon
so has part: feature:406662-406922:1:exon
so has part: feature:420783-420905:1:exon
so has part: feature:434026-434122:1:exon
so has part: feature:435301-435503:1:exon
so has part: feature:470663-470793:1:exon
so has part: feature:480670-480790:1:exon
so has part: feature:508529-508675:1:exon
so has part: feature:516559-516822:1:exon
so has part: feature:535522-535605:1:exon
so has part: feature:535897-536049:1:exon
so has part: feature:547528-550572:1:exon
so has part: feature:551378-552685:1:exon
so has part: feature:556299-556391:1:exon
so has part: feature:559031-559075:1:exon

XP_019115930.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383277-383521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384100-384271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:402206-402315:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403746-403887:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404269-404892:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405508-405864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406161-406301:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:406410-406568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:406662-406922:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:420783-420905:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:434026-434122:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:435301-435503:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:470663-470793:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:480670-480790:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:508529-508675:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:516559-516822:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:535522-535605:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:535897-536049:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:547528-550572:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:551378-552685:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:556299-556391:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:559031-559075:1:exon

akap6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: akap6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein 6 isoform X2
translation: MSIVALSPVAPEPPSPMITSITPVTPTMDPDTSTSSSVVTTIPLSPDLEHQSQDGASSPGPGPSQGSLTGGGLHLSRDPSRRSKKPPPLHTGADWKVVLHLPEIETWLRATSDRVTQLTHSVGQDSDNRHVDVHLVQLKDICEDISDHVEQIHALLETEFSLKLLSYSVNIIVDIRTVQLLWHQLRVSVLVLKERLLQGLQDSNGNFTRQTDILQAFSEDQHQTRLDALTEVDDCGQLTIRCSQDYFSLDCGITAFELSDYSPGDEPEARGVEGDGDDPSQELSQTQNSNLELEAEESEESRLSNHEHHNSLPELITSSDSTNHNYSPSFTAPDHSESAKRPLQGVSHSTEVSPTQPSLPKRAALFSDGGTRVEDSRGGLGNVNLVSGLQLQAELSRSTPSLMDPPDRSKFWLELDSVYPENVSQSYESLQVMNGHNLQRNHVSSRQVGHSQGSVQRPLTELRSSSGPRPTTNAPPPLQDPMSQDEISKQMERTQKETHAHSEGDSDSSLPSPMREQFLSSDLEASGEESDPRPPQGKTAVWIVKRQGQKVSSKASPEKEHWYGSEEFLALPAQLRKTEMLAMKLESLAHSIPLRPGGCDSTEEGLQDVDDWDLTELNTDWDVEESGDNMSSVRESGDDVPSPLPPLLPYRRNLISRFSSTSSSDIAPSLDESIESGPLSDLQSEDDEGQRSADRRMQLTVPLVDVRGRGSLVHQLLEDIQSQDKDPDVWKKIECFVQQLDGFISWLQEALDSTENWTQPRQELDSLRAYLDTHLSFKLNVDSHGALKESIMEEGKALLTVITCHQSGLKDILHMVSSQWDQLQRQIRRQHGWMLRALRCIQARLLYTSQSHESFTASGEPSANRQAPCPVDGLKAELISSQCEAQRATLEQMAIKLSTLQYPSPASRRHCSQLARNNSLQEFEADYQELWDWLMDMDAMVTDSHQLMMSEEQRHHLFKSSHAELMMMESRKTGLLGRAESLKRSGTELSADFHRKIHNLTHTWTQLEKILSEHSGPASSQQNQSANRNSLQVGGRADAMENPRSALSPLTNSLLEQLEARIKELKAWLRDTELLIFNSCLRQQHKDASEQLQSFKSLCSEVRARRRGVASVLKLCQKLLQQSQSGPMAEVGPEAEQHWEALQLLSINLERRWEAIVMQALQWQNRLKRELGEQQVPGNFLEPGLADLHQTSPLPGGPVAPPPDDSWEWDETDMTITEAEPQEVPEPDLMHNLPTEPTLPLDSVLSNGNQPDRNQTNAPGCQYPEMMGGSTSDVQPNVMSQTLPPNNNNIYQVYSLHSVELYRQPPFPHTSSLLHKTKSGKRKQHLLLKSLSKDSSFSSIESLPDLLGGLMSDSQGGDRMTRYQDGVSEKEGGRGSGQSRSSRRSESESGIVSDTGDMETVINSEIQGEEENKEEKEENEQRKDETLDGSNLALHKDNVSRCKERRTKTEESMKEKRWRTDEPRGDSRRNKEEEKRRKHRRGGGEAVEILINGRGILTPADSDSDFEVGGLGVDSSKPFMSRSDITEFKVDQFNGLETPPALSRRASSPELSQGSSLESLLALGVELFPSKDLLHRRASLESCLVPCRGTEGDTGGSLASLGELDLGQSIEVEGGQPGKEKNNESMQGEPSSGELSRRTLDLLKRLENIQSPLAAKMTRSVSDMTLRSTSPQRLPASPSLGGRHNPLCGIPGFSRKGPPSLINESSATASLTELSSTEDSSLGSEDFAMLRNQRHLFLDPSMAANANSSSYRKRCHGNSRGGHGMDEADAASLSLVVNVSCTSACTDEDEDDSDLLSSSTLTLTEEELGVRDGEDEEEARLSGASSGNEDDEDDDEEEMEGSYVLGLEYMKRELQTWIRSPRTSSSSSSKTEAGLRDELQCGTNLSSTFTSSSQSKEQHSFLNRTAPKLIETNTNGVNNKTKRDHKEEQEQEENRRNATRSYISQFVDDVENGNVDQSCLKGKDEDDELLREESSVFTKKGESLRESYVFTKTGESVQDV…
SIO_010081: akap6
subclass of: SO_0000673
so part of: akap6
location: join(383277..383521,384100..384271,402206..402315,403746..403887,404269..404892,405508..405864,406170..406301,406410..406568,406662..406922,420783..420905,434026..434122,435301..435503,470663..470793,480670..480790,508529..508675,516559..516822,535522..535605,535897..536049,547528..550572,551378..552685,556299..556391,559031..559075)
location: region:383277-559075:1
so has part: feature:383277-383521:1:exon
so has part: feature:384100-384271:1:exon
so has part: feature:402206-402315:1:exon
so has part: feature:403746-403887:1:exon
so has part: feature:404269-404892:1:exon
so has part: feature:405508-405864:1:exon
so has part: feature:406170-406301:1:exon
so has part: feature:406410-406568:1:exon
so has part: feature:406662-406922:1:exon
so has part: feature:420783-420905:1:exon
so has part: feature:434026-434122:1:exon
so has part: feature:435301-435503:1:exon
so has part: feature:470663-470793:1:exon
so has part: feature:480670-480790:1:exon
so has part: feature:508529-508675:1:exon
so has part: feature:516559-516822:1:exon
so has part: feature:535522-535605:1:exon
so has part: feature:535897-536049:1:exon
so has part: feature:547528-550572:1:exon
so has part: feature:551378-552685:1:exon
so has part: feature:556299-556391:1:exon
so has part: feature:559031-559075:1:exon

XP_019115932.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383277-383521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384100-384271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:402206-402315:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403746-403887:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404269-404892:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405508-405864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406170-406301:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:406410-406568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:406662-406922:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:420783-420905:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:434026-434122:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:435301-435503:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:470663-470793:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:480670-480790:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:508529-508675:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:516559-516822:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:535522-535605:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:535897-536049:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:547528-550572:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:551378-552685:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:556299-556391:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:559031-559075:1:exon

npas3
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: npas3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 588407..896197
location: region:588407-896197:1
so has part: feature:588407-896197:1:exon
subclass of: SO_0000010

104924826
type: Gene
SIO_000068: ncbigene

position:588407:1
position: 588407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896197:1
position: 896197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588407-896197:1:exon

npas3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: npas3
product: neuronal PAS domain protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019263216.2
SIO_010081: npas3
subclass of: SO_0000673
so part of: npas3
location: join(588407..588771,589120..590044,669361..669459,709782..710026,750839..750921,786853..786942,848741..848921,865698..865816,869600..869793,871764..871870,887233..887380,887862..887977,892771..896197)
location: region:588407-896197:1
so has part: feature:588407-588771:1:exon
so has part: feature:589120-590044:1:exon
so has part: feature:669361-669459:1:exon
so has part: feature:709782-710026:1:exon
so has part: feature:750839-750921:1:exon
so has part: feature:786853-786942:1:exon
so has part: feature:848741-848921:1:exon
so has part: feature:865698-865816:1:exon
so has part: feature:869600-869793:1:exon
so has part: feature:871764-871870:1:exon
so has part: feature:887233-887380:1:exon
so has part: feature:887862-887977:1:exon
so has part: feature:892771-896197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:588407-588771:1:exon

position:588771:1
position: 588771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:589120-590044:1:exon

position:589120:1
position: 589120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590044:1
position: 590044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:669361-669459:1:exon

position:669361:1
position: 669361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669459:1
position: 669459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:709782-710026:1:exon

position:709782:1
position: 709782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710026:1
position: 710026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:750839-750921:1:exon

position:750839:1
position: 750839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750921:1
position: 750921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:786853-786942:1:exon

position:786853:1
position: 786853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786942:1
position: 786942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:848741-848921:1:exon

position:848741:1
position: 848741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848921:1
position: 848921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:865698-865816:1:exon

position:865698:1
position: 865698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865816:1
position: 865816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:869600-869793:1:exon

position:869600:1
position: 869600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869793:1
position: 869793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:871764-871870:1:exon

position:871764:1
position: 871764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871870:1
position: 871870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:887233-887380:1:exon

position:887233:1
position: 887233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887380:1
position: 887380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:887862-887977:1:exon

position:887862:1
position: 887862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887977:1
position: 887977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:892771-896197:1:exon

position:892771:1
position: 892771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

npas3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: npas3
product: neuronal PAS domain protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019263215.2
SIO_010081: npas3
subclass of: SO_0000673
so part of: npas3
location: join(588778..590044,669361..669459,709782..710026,750839..750921,786853..786942,848741..848921,865698..865816,869600..869793,871764..871870,887233..887380,887862..887977,892771..896197)
location: region:588778-896197:1
so has part: feature:588778-590044:1:exon
so has part: feature:669361-669459:1:exon
so has part: feature:709782-710026:1:exon
so has part: feature:750839-750921:1:exon
so has part: feature:786853-786942:1:exon
so has part: feature:848741-848921:1:exon
so has part: feature:865698-865816:1:exon
so has part: feature:869600-869793:1:exon
so has part: feature:871764-871870:1:exon
so has part: feature:887233-887380:1:exon
so has part: feature:887862-887977:1:exon
so has part: feature:892771-896197:1:exon

position:588778:1
position: 588778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588778-590044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:669361-669459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709782-710026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:750839-750921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786853-786942:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848741-848921:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865698-865816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:869600-869793:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871764-871870:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:887233-887380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:887862-887977:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:892771-896197:1:exon

npas3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: npas3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal PAS domain-containing protein 3 isoform X1
translation: MIRIFPDFSVQVTASAGGGPGAGSGGGGGGGGGGGGMVTGPSVGRVPVPGATNGTPQSVQGITAYQQSDPYWERPANAGSCSAARPKTLHLAGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKAIGAQRRRSPSAVASEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPGDHVEMAEQLGMKLPPGRGMSLSQGAVNEDGASSASSSSHSETPEPVESSSPSLLAPDNTLERSFFVRMKSTLTKRGVHIKSSGYKVIHVTGRLRIRMALTHSRSVPNQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIIYCENRINDYMDLTPVDIVGKRCYQFIHAEDVEGIRQCHLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEKNVIWVNYVLSNPEYKDTPMDIAQLPNLPEKTSESSETSDSESESKENSDNENAKSEGKPGHQSERSEDPETDSKRQQQPSQPHCSSEQEMKRQEEGDSSSNPESQDSDDSLEPSDGEGEEQEEATGGGGGGGGGGGGRLARLAGLGGLGGLGTISGLGNLGGLHIKVEHYGEGEEVQLHNSQSSSSEEEEEEEDDDEEEDGGVQECDSANAGGKLQKRRKRRKVQKWDGSRSRRVRLSSTTPSPVAMGDTTPLVDPSQATSASSSHLLASSGSPNSAGATSSVLKIKTEMAEPINFDNDSSIWNYPPNREISRNESPYSMTSKPAAPGSHETFPSPQGGSLQVAIPDSVLTPPGTEGGAGGVRKPPYNGSSAPSSASSAASLAPPSSASSADPLSPPLSASPRDKQQGTPTTSSSSSSSSSSSSSSSSSTLLYSGDLEALQRLQAGNVVLPLVHRVTGTLASTNTTAPRVYTTGTIRYAPADVTLAMAQGNLLPNAAMNFVDSSGFGLDPKTPMEMLYHHVHRLNMSAAAAAGPFVGSPAATGANGTLGGQMPSAANVFTTAEGLFSTLPFPVYSNGIHTTQTTLERKED
SIO_010081: npas3
subclass of: SO_0000673
so part of: npas3
location: join(589842..590044,669361..669459,709782..710026,750839..750921,786853..786942,848741..848921,865698..865816,869600..869793,871764..871870,887233..887380,887862..887977,892771..894398)
location: region:589842-894398:1
so has part: feature:589842-590044:1:exon
so has part: feature:669361-669459:1:exon
so has part: feature:709782-710026:1:exon
so has part: feature:750839-750921:1:exon
so has part: feature:786853-786942:1:exon
so has part: feature:848741-848921:1:exon
so has part: feature:865698-865816:1:exon
so has part: feature:869600-869793:1:exon
so has part: feature:871764-871870:1:exon
so has part: feature:887233-887380:1:exon
so has part: feature:887862-887977:1:exon
so has part: feature:892771-894398:1:exon

XP_019118760.2
type: Protein
SIO_000068: ncbiprotein

position:589842:1
position: 589842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894398:1
position: 894398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589842-590044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:669361-669459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709782-710026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:750839-750921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786853-786942:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848741-848921:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865698-865816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:869600-869793:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871764-871870:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:887233-887380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:887862-887977:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:892771-894398:1:exon

npas3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: npas3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal PAS domain-containing protein 3 isoform X1
translation: MIRIFPDFSVQVTASAGGGPGAGSGGGGGGGGGGGGMVTGPSVGRVPVPGATNGTPQSVQGITAYQQSDPYWERPANAGSCSAARPKTLHLAGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKAIGAQRRRSPSAVASEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPGDHVEMAEQLGMKLPPGRGMSLSQGAVNEDGASSASSSSHSETPEPVESSSPSLLAPDNTLERSFFVRMKSTLTKRGVHIKSSGYKVIHVTGRLRIRMALTHSRSVPNQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIIYCENRINDYMDLTPVDIVGKRCYQFIHAEDVEGIRQCHLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEKNVIWVNYVLSNPEYKDTPMDIAQLPNLPEKTSESSETSDSESESKENSDNENAKSEGKPGHQSERSEDPETDSKRQQQPSQPHCSSEQEMKRQEEGDSSSNPESQDSDDSLEPSDGEGEEQEEATGGGGGGGGGGGGRLARLAGLGGLGGLGTISGLGNLGGLHIKVEHYGEGEEVQLHNSQSSSSEEEEEEEDDDEEEDGGVQECDSANAGGKLQKRRKRRKVQKWDGSRSRRVRLSSTTPSPVAMGDTTPLVDPSQATSASSSHLLASSGSPNSAGATSSVLKIKTEMAEPINFDNDSSIWNYPPNREISRNESPYSMTSKPAAPGSHETFPSPQGGSLQVAIPDSVLTPPGTEGGAGGVRKPPYNGSSAPSSASSAASLAPPSSASSADPLSPPLSASPRDKQQGTPTTSSSSSSSSSSSSSSSSSTLLYSGDLEALQRLQAGNVVLPLVHRVTGTLASTNTTAPRVYTTGTIRYAPADVTLAMAQGNLLPNAAMNFVDSSGFGLDPKTPMEMLYHHVHRLNMSAAAAAGPFVGSPAATGANGTLGGQMPSAANVFTTAEGLFSTLPFPVYSNGIHTTQTTLERKED
SIO_010081: npas3
subclass of: SO_0000673
so part of: npas3
location: join(589842..590044,669361..669459,709782..710026,750839..750921,786853..786942,848741..848921,865698..865816,869600..869793,871764..871870,887233..887380,887862..887977,892771..894398)
location: region:589842-894398:1
so has part: feature:589842-590044:1:exon
so has part: feature:669361-669459:1:exon
so has part: feature:709782-710026:1:exon
so has part: feature:750839-750921:1:exon
so has part: feature:786853-786942:1:exon
so has part: feature:848741-848921:1:exon
so has part: feature:865698-865816:1:exon
so has part: feature:869600-869793:1:exon
so has part: feature:871764-871870:1:exon
so has part: feature:887233-887380:1:exon
so has part: feature:887862-887977:1:exon
so has part: feature:892771-894398:1:exon

XP_019118761.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589842-590044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:669361-669459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709782-710026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:750839-750921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786853-786942:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848741-848921:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865698-865816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:869600-869793:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871764-871870:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:887233-887380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:887862-887977:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:892771-894398:1:exon

npas3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: npas3
product: neuronal PAS domain protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019263217.2
SIO_010081: npas3
subclass of: SO_0000673
so part of: npas3
location: join(592595..593660,669361..669459,709782..710026,750839..750921,786853..786942,848741..848921,865698..865816,869600..869793,871764..871870,887233..887380,887862..887977,892771..896197)
location: region:592595-896197:1
so has part: feature:592595-593660:1:exon
so has part: feature:669361-669459:1:exon
so has part: feature:709782-710026:1:exon
so has part: feature:750839-750921:1:exon
so has part: feature:786853-786942:1:exon
so has part: feature:848741-848921:1:exon
so has part: feature:865698-865816:1:exon
so has part: feature:869600-869793:1:exon
so has part: feature:871764-871870:1:exon
so has part: feature:887233-887380:1:exon
so has part: feature:887862-887977:1:exon
so has part: feature:892771-896197:1:exon

position:592595:1
position: 592595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592595-593660:1:exon

position:593660:1
position: 593660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:669361-669459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709782-710026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:750839-750921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786853-786942:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848741-848921:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865698-865816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:869600-869793:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871764-871870:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:887233-887380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:887862-887977:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:892771-896197:1:exon

npas3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: npas3
product: neuronal PAS domain protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019263218.2
SIO_010081: npas3
subclass of: SO_0000673
so part of: npas3
location: join(592596..593660,709782..710026,750839..750921,786853..786942,848741..848921,865698..865816,869600..869793,871764..871870,887233..887380,887862..887977,892771..896197)
location: region:592596-896197:1
so has part: feature:592596-593660:1:exon
so has part: feature:709782-710026:1:exon
so has part: feature:750839-750921:1:exon
so has part: feature:786853-786942:1:exon
so has part: feature:848741-848921:1:exon
so has part: feature:865698-865816:1:exon
so has part: feature:869600-869793:1:exon
so has part: feature:871764-871870:1:exon
so has part: feature:887233-887380:1:exon
so has part: feature:887862-887977:1:exon
so has part: feature:892771-896197:1:exon

position:592596:1
position: 592596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592596-593660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:709782-710026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750839-750921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:786853-786942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848741-848921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865698-865816:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:869600-869793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871764-871870:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:887233-887380:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:887862-887977:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892771-896197:1:exon

npas3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: npas3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal PAS domain-containing protein 3 isoform X2
translation: MAPTKPSIQQDPTRRERDPYWERPANAGSCSAARPKTLHLAGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKAIGAQRRRSPSAVASEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPGDHVEMAEQLGMKLPPGRGMSLSQGAVNEDGASSASSSSHSETPEPVESSSPSLLAPDNTLERSFFVRMKSTLTKRGVHIKSSGYKVIHVTGRLRIRMALTHSRSVPNQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIIYCENRINDYMDLTPVDIVGKRCYQFIHAEDVEGIRQCHLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEKNVIWVNYVLSNPEYKDTPMDIAQLPNLPEKTSESSETSDSESESKENSDNENAKSEGKPGHQSERSEDPETDSKRQQQPSQPHCSSEQEMKRQEEGDSSSNPESQDSDDSLEPSDGEGEEQEEATGGGGGGGGGGGGRLARLAGLGGLGGLGTISGLGNLGGLHIKVEHYGEGEEVQLHNSQSSSSEEEEEEEDDDEEEDGGVQECDSANAGGKLQKRRKRRKVQKWDGSRSRRVRLSSTTPSPVAMGDTTPLVDPSQATSASSSHLLASSGSPNSAGATSSVLKIKTEMAEPINFDNDSSIWNYPPNREISRNESPYSMTSKPAAPGSHETFPSPQGGSLQVAIPDSVLTPPGTEGGAGGVRKPPYNGSSAPSSASSAASLAPPSSASSADPLSPPLSASPRDKQQGTPTTSSSSSSSSSSSSSSSSSTLLYSGDLEALQRLQAGNVVLPLVHRVTGTLASTNTTAPRVYTTGTIRYAPADVTLAMAQGNLLPNAAMNFVDSSGFGLDPKTPMEMLYHHVHRLNMSAAAAAGPFVGSPAATGANGTLGGQMPSAANVFTTAEGLFSTLPFPVYSNGIHTTQTTLERKED
SIO_010081: npas3
subclass of: SO_0000673
so part of: npas3
location: join(593611..593660,669361..669459,709782..710026,750839..750921,786853..786942,848741..848921,865698..865816,869600..869793,871764..871870,887233..887380,887862..887977,892771..894398)
location: region:593611-894398:1
so has part: feature:593611-593660:1:exon
so has part: feature:669361-669459:1:exon
so has part: feature:709782-710026:1:exon
so has part: feature:750839-750921:1:exon
so has part: feature:786853-786942:1:exon
so has part: feature:848741-848921:1:exon
so has part: feature:865698-865816:1:exon
so has part: feature:869600-869793:1:exon
so has part: feature:871764-871870:1:exon
so has part: feature:887233-887380:1:exon
so has part: feature:887862-887977:1:exon
so has part: feature:892771-894398:1:exon

XP_019118762.2
type: Protein
SIO_000068: ncbiprotein

position:593611:1
position: 593611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593611-593660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:669361-669459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709782-710026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:750839-750921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786853-786942:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848741-848921:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865698-865816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:869600-869793:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871764-871870:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:887233-887380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:887862-887977:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:892771-894398:1:exon

npas3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: npas3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal PAS domain-containing protein 3 isoform X3
translation: MAPTKPSIQQDPTRRERLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKAIGAQRRRSPSAVASEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPGDHVEMAEQLGMKLPPGRGMSLSQGAVNEDGASSASSSSHSETPEPVESSSPSLLAPDNTLERSFFVRMKSTLTKRGVHIKSSGYKVIHVTGRLRIRMALTHSRSVPNQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIIYCENRINDYMDLTPVDIVGKRCYQFIHAEDVEGIRQCHLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEKNVIWVNYVLSNPEYKDTPMDIAQLPNLPEKTSESSETSDSESESKENSDNENAKSEGKPGHQSERSEDPETDSKRQQQPSQPHCSSEQEMKRQEEGDSSSNPESQDSDDSLEPSDGEGEEQEEATGGGGGGGGGGGGRLARLAGLGGLGGLGTISGLGNLGGLHIKVEHYGEGEEVQLHNSQSSSSEEEEEEEDDDEEEDGGVQECDSANAGGKLQKRRKRRKVQKWDGSRSRRVRLSSTTPSPVAMGDTTPLVDPSQATSASSSHLLASSGSPNSAGATSSVLKIKTEMAEPINFDNDSSIWNYPPNREISRNESPYSMTSKPAAPGSHETFPSPQGGSLQVAIPDSVLTPPGTEGGAGGVRKPPYNGSSAPSSASSAASLAPPSSASSADPLSPPLSASPRDKQQGTPTTSSSSSSSSSSSSSSSSSTLLYSGDLEALQRLQAGNVVLPLVHRVTGTLASTNTTAPRVYTTGTIRYAPADVTLAMAQGNLLPNAAMNFVDSSGFGLDPKTPMEMLYHHVHRLNMSAAAAAGPFVGSPAATGANGTLGGQMPSAANVFTTAEGLFSTLPFPVYSNGIHTTQTTLERKED
SIO_010081: npas3
subclass of: SO_0000673
so part of: npas3
location: join(593611..593660,709782..710026,750839..750921,786853..786942,848741..848921,865698..865816,869600..869793,871764..871870,887233..887380,887862..887977,892771..894398)
location: region:593611-894398:1
so has part: feature:593611-593660:1:exon
so has part: feature:709782-710026:1:exon
so has part: feature:750839-750921:1:exon
so has part: feature:786853-786942:1:exon
so has part: feature:848741-848921:1:exon
so has part: feature:865698-865816:1:exon
so has part: feature:869600-869793:1:exon
so has part: feature:871764-871870:1:exon
so has part: feature:887233-887380:1:exon
so has part: feature:887862-887977:1:exon
so has part: feature:892771-894398:1:exon

XP_019118763.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:593611-593660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:709782-710026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750839-750921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:786853-786942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848741-848921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865698-865816:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:869600-869793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871764-871870:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:887233-887380:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:887862-887977:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892771-894398:1:exon

npas3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: npas3
product: neuronal PAS domain protein 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019263219.2
SIO_010081: npas3
subclass of: SO_0000673
so part of: npas3
location: join(709885..710026,750563..750573,750839..750921,786853..786942,848741..848921,865698..865816,869600..869793,871764..871870,887233..887380,887862..887977,892771..896197)
location: region:709885-896197:1
so has part: feature:709885-710026:1:exon
so has part: feature:750563-750573:1:exon
so has part: feature:750839-750921:1:exon
so has part: feature:786853-786942:1:exon
so has part: feature:848741-848921:1:exon
so has part: feature:865698-865816:1:exon
so has part: feature:869600-869793:1:exon
so has part: feature:871764-871870:1:exon
so has part: feature:887233-887380:1:exon
so has part: feature:887862-887977:1:exon
so has part: feature:892771-896197:1:exon

position:709885:1
position: 709885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709885-710026:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750563-750573:1:exon

position:750563:1
position: 750563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750573:1
position: 750573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:750839-750921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:786853-786942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848741-848921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865698-865816:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:869600-869793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871764-871870:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:887233-887380:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:887862-887977:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892771-896197:1:exon

npas3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: npas3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal PAS domain-containing protein 3 isoform X4
translation: MEPAHGGTAAQHLRQRLYKPIGAQRRRSPSAVASEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPGDHVEMAEQLGMKLPPGRGMSLSQGAVNEDGASSASSSSHSETPEPVESSSPSLLAPDNTLERSFFVRMKSTLTKRGVHIKSSGYKVIHVTGRLRIRMALTHSRSVPNQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIIYCENRINDYMDLTPVDIVGKRCYQFIHAEDVEGIRQCHLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEKNVIWVNYVLSNPEYKDTPMDIAQLPNLPEKTSESSETSDSESESKENSDNENAKSEGKPGHQSERSEDPETDSKRQQQPSQPHCSSEQEMKRQEEGDSSSNPESQDSDDSLEPSDGEGEEQEEATGGGGGGGGGGGGRLARLAGLGGLGGLGTISGLGNLGGLHIKVEHYGEGEEVQLHNSQSSSSEEEEEEEDDDEEEDGGVQECDSANAGGKLQKRRKRRKVQKWDGSRSRRVRLSSTTPSPVAMGDTTPLVDPSQATSASSSHLLASSGSPNSAGATSSVLKIKTEMAEPINFDNDSSIWNYPPNREISRNESPYSMTSKPAAPGSHETFPSPQGGSLQVAIPDSVLTPPGTEGGAGGVRKPPYNGSSAPSSASSAASLAPPSSASSADPLSPPLSASPRDKQQGTPTTSSSSSSSSSSSSSSSSSTLLYSGDLEALQRLQAGNVVLPLVHRVTGTLASTNTTAPRVYTTGTIRYAPADVTLAMAQGNLLPNAAMNFVDSSGFGLDPKTPMEMLYHHVHRLNMSAAAAAGPFVGSPAATGANGTLGGQMPSAANVFTTAEGLFSTLPFPVYSNGIHTTQTTLERKED
SIO_010081: npas3
subclass of: SO_0000673
so part of: npas3
location: join(709980..710026,750563..750573,750839..750921,786853..786942,848741..848921,865698..865816,869600..869793,871764..871870,887233..887380,887862..887977,892771..894398)
location: region:709980-894398:1
so has part: feature:709980-710026:1:exon
so has part: feature:750563-750573:1:exon
so has part: feature:750839-750921:1:exon
so has part: feature:786853-786942:1:exon
so has part: feature:848741-848921:1:exon
so has part: feature:865698-865816:1:exon
so has part: feature:869600-869793:1:exon
so has part: feature:871764-871870:1:exon
so has part: feature:887233-887380:1:exon
so has part: feature:887862-887977:1:exon
so has part: feature:892771-894398:1:exon

XP_019118764.2
type: Protein
SIO_000068: ncbiprotein

position:709980:1
position: 709980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709980-710026:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750563-750573:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750839-750921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:786853-786942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848741-848921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865698-865816:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:869600-869793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871764-871870:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:887233-887380:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:887862-887977:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892771-894398:1:exon

LOC113745778
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC113745778
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(854452..862303)
location: region:854452-862303:-1
so has part: feature:854452-862303:-1:exon
subclass of: SO_0000011

113745778
type: Gene
SIO_000068: ncbigene

position:854452:-1
position: 854452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862303:-1
position: 862303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854452-862303:-1:exon

LOC113745778
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 215358
nc RNA class: lncRNA
gene: LOC113745778
product: uncharacterized LOC113745778
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003462393.1
SIO_010081: LOC113745778
subclass of: SO_0000673
so part of: LOC113745778
location: complement(join(854452..856093,857347..857833,861374..862303))
location: region:854452-862303:-1
so has part: feature:861374-862303:-1:exon
so has part: feature:857347-857833:-1:exon
so has part: feature:854452-856093:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:861374-862303:-1:exon

position:861374:-1
position: 861374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:857347-857833:-1:exon

position:857347:-1
position: 857347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857833:-1
position: 857833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:854452-856093:-1:exon

position:856093:-1
position: 856093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

egln3
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: egln3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(904416..918739)
location: region:904416-918739:-1
so has part: feature:904416-918739:-1:exon
subclass of: SO_0000010

104924821
type: Gene
SIO_000068: ncbigene

position:904416:-1
position: 904416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918739:-1
position: 918739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904416-918739:-1:exon

egln3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: egln3
product: egl-9 family hypoxia inducible factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_010738284.3
SIO_010081: egln3
subclass of: SO_0000673
so part of: egln3
location: complement(join(904416..905056,905186..905259,906109..906245,906582..906701,917206..918138,918582..918739))
location: region:904416-918739:-1
so has part: feature:918582-918739:-1:exon
so has part: feature:917206-918138:-1:exon
so has part: feature:906582-906701:-1:exon
so has part: feature:906109-906245:-1:exon
so has part: feature:905186-905259:-1:exon
so has part: feature:904416-905056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:918582-918739:-1:exon

position:918582:-1
position: 918582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:917206-918138:-1:exon

position:917206:-1
position: 917206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918138:-1
position: 918138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:906582-906701:-1:exon

position:906582:-1
position: 906582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906701:-1
position: 906701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:906109-906245:-1:exon

position:906109:-1
position: 906109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906245:-1
position: 906245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:905186-905259:-1:exon

position:905186:-1
position: 905186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905259:-1
position: 905259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:904416-905056:-1:exon

position:905056:-1
position: 905056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

egln3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: egln3
product: egl-9 family hypoxia inducible factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_010738285.3
SIO_010081: egln3
subclass of: SO_0000673
so part of: egln3
location: complement(join(904416..905056,905186..905259,906109..906245,906582..906701,913287..913910))
location: region:904416-913910:-1
so has part: feature:913287-913910:-1:exon
so has part: feature:906582-906701:-1:exon
so has part: feature:906109-906245:-1:exon
so has part: feature:905186-905259:-1:exon
so has part: feature:904416-905056:-1:exon

position:913910:-1
position: 913910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913287-913910:-1:exon

position:913287:-1
position: 913287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:906582-906701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:906109-906245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:905186-905259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:904416-905056:-1:exon

egln3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: egln3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: egl nine homolog 3 isoform X1
translation: MRPDADMSPLSNEEKNETHEGGVDGADHRHPQEPPSCKYSSVDTRPEGTSLGSQGVKVEFGSGAPVRGNFRISVSSVNWNQDGVGVKAGAVDEVKVGTVTRNCSGVRAADGIGNSSRARNGAGMDLWFEAGAEARNNAAVRVGDRLGAGAGVLPCGRPWSAHPRSKDRRYHSSHRLMLHYIIPCMNSYGMCIIDDFLGSKIGDQILQEVRELHSAGKMRDGELASRGLEHSKSIRGDQIVWVEGKEPGCENIGYLLSRMDRLITYADGKLGKHKIRGRNSKAMVACYPGNGAGYVKHVDNPNCDGRCITCIYYLNKNWDAKEHGGVLRIFPEGEPYVADIKPLFDRLLFFWSDRRNPHEVQPSYSTRYAITVWYFDSEERAEAKRRFRDRTAQQQGSSSS
SIO_010081: egln3
subclass of: SO_0000673
so part of: egln3
location: complement(join(905028..905056,905186..905259,906109..906245,906582..906701,917206..918048))
location: region:905028-918048:-1
so has part: feature:917206-918048:-1:exon
so has part: feature:906582-906701:-1:exon
so has part: feature:906109-906245:-1:exon
so has part: feature:905186-905259:-1:exon
so has part: feature:905028-905056:-1:exon

XP_010736586.2
type: Protein
SIO_000068: ncbiprotein

position:905028:-1
position: 905028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918048:-1
position: 918048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917206-918048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:906582-906701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:906109-906245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:905186-905259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:905028-905056:-1:exon

egln3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: egln3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: egl nine homolog 3 isoform X2
translation: MPFIEHVSDSDLERLALERVVPTLLSRGYCYVDGLLGEVAGDAVLDQVKEMHRSGQLQDGRLAGSVPGVHRRSIRGDKIAWVSGSERGCEAISFLLNLIDKLISVCARRLGGKAIRERSEAMVACYPGNGAGYVKHVDNPNCDGRCITCIYYLNKNWDAKEHGGVLRIFPEGEPYVADIKPLFDRLLFFWSDRRNPHEVQPSYSTRYAITVWYFDSEERAEAKRRFRDRTAQQQGSSSS
SIO_010081: egln3
subclass of: SO_0000673
so part of: egln3
location: complement(join(905028..905056,905186..905259,906109..906245,906582..906701,913287..913646))
location: region:905028-913646:-1
so has part: feature:913287-913646:-1:exon
so has part: feature:906582-906701:-1:exon
so has part: feature:906109-906245:-1:exon
so has part: feature:905186-905259:-1:exon
so has part: feature:905028-905056:-1:exon

XP_010736587.1
type: Protein
SIO_000068: ncbiprotein

position:913646:-1
position: 913646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913287-913646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:906582-906701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:906109-906245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:905186-905259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:905028-905056:-1:exon

LOC113745764
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC113745764
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 920424..926420
location: region:920424-926420:1
so has part: feature:920424-926420:1:exon
subclass of: SO_0000011

113745764
type: Gene
SIO_000068: ncbigene

position:920424:1
position: 920424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926420:1
position: 926420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920424-926420:1:exon

LOC113745764
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 215358
nc RNA class: lncRNA
gene: LOC113745764
product: uncharacterized LOC113745764
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_003462382.1
SIO_010081: LOC113745764
subclass of: SO_0000673
so part of: LOC113745764
location: join(920424..920548,924483..926420)
location: region:920424-926420:1
so has part: feature:920424-920548:1:exon
so has part: feature:924483-926420:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:920424-920548:1:exon

position:920548:1
position: 920548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:924483-926420:1:exon

position:924483:1
position: 924483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sptssa
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: sptssa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(930773..935844)
location: region:930773-935844:-1
so has part: feature:930773-935844:-1:exon
subclass of: SO_0000010

104924822
type: Gene
SIO_000068: ncbigene

position:930773:-1
position: 930773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935844:-1
position: 935844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:930773-935844:-1:exon

sptssa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: sptssa
product: serine palmitoyltransferase small subunit A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_010738287.3
SIO_010081: sptssa
subclass of: SO_0000673
so part of: sptssa
location: complement(join(930773..931960,935640..935844))
location: region:930773-935844:-1
so has part: feature:935640-935844:-1:exon
so has part: feature:930773-931960:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:935640-935844:-1:exon

position:935640:-1
position: 935640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:930773-931960:-1:exon

position:931960:-1
position: 931960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sptssa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: sptssa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine palmitoyltransferase small subunit A
translation: MALGDCWKQLSWFYYQYLLVTALYMLEPWERTVFNSLLISVAGMAVYTGYVFMPQHIMAILHYFEVVQ
SIO_010081: sptssa
subclass of: SO_0000673
so part of: sptssa
location: complement(join(931857..931960,935640..935742))
location: region:931857-935742:-1
so has part: feature:935640-935742:-1:exon
so has part: feature:931857-931960:-1:exon

XP_010736589.1
type: Protein
SIO_000068: ncbiprotein

position:931857:-1
position: 931857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935742:-1
position: 935742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:935640-935742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:931857-931960:-1:exon

eapp
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: eapp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(936730..941491)
location: region:936730-941491:-1
so has part: feature:936730-941491:-1:exon
subclass of: SO_0000010

104924823
type: Gene
SIO_000068: ncbigene

position:936730:-1
position: 936730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941491:-1
position: 941491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936730-941491:-1:exon

eapp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: eapp
product: E2F associated phosphoprotein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_010738289.3
SIO_010081: eapp
subclass of: SO_0000673
so part of: eapp
location: complement(join(936730..937632,937753..937881,937960..938074,938163..938297,938534..938715,941289..941491))
location: region:936730-941491:-1
so has part: feature:941289-941491:-1:exon
so has part: feature:938534-938715:-1:exon
so has part: feature:938163-938297:-1:exon
so has part: feature:937960-938074:-1:exon
so has part: feature:937753-937881:-1:exon
so has part: feature:936730-937632:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:941289-941491:-1:exon

position:941289:-1
position: 941289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:938534-938715:-1:exon

position:938534:-1
position: 938534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938715:-1
position: 938715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:938163-938297:-1:exon

position:938163:-1
position: 938163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938297:-1
position: 938297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:937960-938074:-1:exon

position:937960:-1
position: 937960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938074:-1
position: 938074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:937753-937881:-1:exon

position:937753:-1
position: 937753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937881:-1
position: 937881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:936730-937632:-1:exon

position:937632:-1
position: 937632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

eapp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: eapp
product: E2F associated phosphoprotein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_010738288.3
SIO_010081: eapp
subclass of: SO_0000673
so part of: eapp
location: complement(join(936730..937632,937753..937881,937960..938074,938163..938300,938534..938715,941289..941490))
location: region:936730-941490:-1
so has part: feature:941289-941490:-1:exon
so has part: feature:938534-938715:-1:exon
so has part: feature:938163-938300:-1:exon
so has part: feature:937960-938074:-1:exon
so has part: feature:937753-937881:-1:exon
so has part: feature:936730-937632:-1:exon

position:941490:-1
position: 941490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941289-941490:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938534-938715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938163-938300:-1:exon

position:938300:-1
position: 938300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:937960-938074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:937753-937881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:936730-937632:-1:exon

eapp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: eapp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E2F-associated phosphoprotein isoform X2
translation: MDKLVKLQESDPYEIEEPSDEDRAETSSEDELDVLLNGTPEQKKKLIREYLTGESESSSGDEFEKEMEAELSSTIKTMEGTWGPSTAETSGSQGAGGGGGGGGGGGGPGHPPNSQMYDEVYFDSDSEEEDTPSSSTGRRRKQRTILTNDELLYDPDEDDRDQAWVDARRRQYHCRKRPTAASRLQPRQSQGLPSSDAILNCPACMTTLCLDCQRHEKYRTQYRAMFVMNCTVKKDEVLRYQTQEQVKKQRKRKKRRGQNTETMPNETPDPTPAGMDADEVYHPVQCSECSTEVAVFDKDEVYHFFNILSSHC
SIO_010081: eapp
subclass of: SO_0000673
so part of: eapp
location: complement(join(937335..937632,937753..937881,937960..938074,938163..938297,938534..938715,941289..941368))
location: region:937335-941368:-1
so has part: feature:941289-941368:-1:exon
so has part: feature:938534-938715:-1:exon
so has part: feature:938163-938297:-1:exon
so has part: feature:937960-938074:-1:exon
so has part: feature:937753-937881:-1:exon
so has part: feature:937335-937632:-1:exon

XP_010736591.2
type: Protein
SIO_000068: ncbiprotein

position:937335:-1
position: 937335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941368:-1
position: 941368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941289-941368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938534-938715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938163-938297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:937960-938074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:937753-937881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:937335-937632:-1:exon

eapp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: eapp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E2F-associated phosphoprotein isoform X1
translation: MDKLVKLQESDPYEIEEPSDEDRAETSSEDELDVLLNGTPEQKKKLIREYLTGESESSSGDEFEKEMEAELSSTIKTMEGTWGPSTAAETSGSQGAGGGGGGGGGGGGPGHPPNSQMYDEVYFDSDSEEEDTPSSSTGRRRKQRTILTNDELLYDPDEDDRDQAWVDARRRQYHCRKRPTAASRLQPRQSQGLPSSDAILNCPACMTTLCLDCQRHEKYRTQYRAMFVMNCTVKKDEVLRYQTQEQVKKQRKRKKRRGQNTETMPNETPDPTPAGMDADEVYHPVQCSECSTEVAVFDKDEVYHFFNILSSHC
SIO_010081: eapp
subclass of: SO_0000673
so part of: eapp
location: complement(join(937335..937632,937753..937881,937960..938074,938163..938300,938534..938715,941289..941368))
location: region:937335-941368:-1
so has part: feature:941289-941368:-1:exon
so has part: feature:938534-938715:-1:exon
so has part: feature:938163-938300:-1:exon
so has part: feature:937960-938074:-1:exon
so has part: feature:937753-937881:-1:exon
so has part: feature:937335-937632:-1:exon

XP_010736590.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:941289-941368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938534-938715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938163-938300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:937960-938074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:937753-937881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:937335-937632:-1:exon

LOC113745780
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC113745780
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(947486..949983)
location: region:947486-949983:-1
so has part: feature:947486-949983:-1:exon
subclass of: SO_0000011

113745780
type: Gene
SIO_000068: ncbigene

position:947486:-1
position: 947486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949983:-1
position: 949983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947486-949983:-1:exon

LOC113745780
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 215358
nc RNA class: lncRNA
gene: LOC113745780
product: uncharacterized LOC113745780
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003462394.1
SIO_010081: LOC113745780
subclass of: SO_0000673
so part of: LOC113745780
location: complement(join(947486..947789,947883..948036,949132..949983))
location: region:947486-949983:-1
so has part: feature:949132-949983:-1:exon
so has part: feature:947883-948036:-1:exon
so has part: feature:947486-947789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:949132-949983:-1:exon

position:949132:-1
position: 949132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:947883-948036:-1:exon

position:947883:-1
position: 947883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948036:-1
position: 948036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:947486-947789:-1:exon

position:947789:-1
position: 947789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

prkd1
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: prkd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1053883..1104558
location: region:1053883-1104558:1
so has part: feature:1053883-1104558:1:exon
subclass of: SO_0000010

104927442
type: Gene
SIO_000068: ncbigene

position:1053883:1
position: 1053883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104558:1
position: 1104558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1053883-1104558:1:exon

prkd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: prkd1
product: protein kinase D1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019263208.2
SIO_010081: prkd1
subclass of: SO_0000673
so part of: prkd1
location: join(1053883..1054147,1066103..1066241,1080624..1080755,1080851..1081020,1082274..1082297,1082877..1083087,1085461..1085538,1085665..1085857,1085953..1086076,1086692..1086769,1087410..1087577,1088322..1088433,1089544..1089596,1092347..1092419,1092868..1092974,1093329..1093490,1095016..1095114,1097444..1097604,1097860..1097966,1103063..1103148,1104050..1104558)
location: region:1053883-1104558:1
so has part: feature:1053883-1054147:1:exon
so has part: feature:1066103-1066241:1:exon
so has part: feature:1080624-1080755:1:exon
so has part: feature:1080851-1081020:1:exon
so has part: feature:1082274-1082297:1:exon
so has part: feature:1082877-1083087:1:exon
so has part: feature:1085461-1085538:1:exon
so has part: feature:1085665-1085857:1:exon
so has part: feature:1085953-1086076:1:exon
so has part: feature:1086692-1086769:1:exon
so has part: feature:1087410-1087577:1:exon
so has part: feature:1088322-1088433:1:exon
so has part: feature:1089544-1089596:1:exon
so has part: feature:1092347-1092419:1:exon
so has part: feature:1092868-1092974:1:exon
so has part: feature:1093329-1093490:1:exon
so has part: feature:1095016-1095114:1:exon
so has part: feature:1097444-1097604:1:exon
so has part: feature:1097860-1097966:1:exon
so has part: feature:1103063-1103148:1:exon
so has part: feature:1104050-1104558:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1053883-1054147:1:exon

position:1054147:1
position: 1054147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1066103-1066241:1:exon

position:1066103:1
position: 1066103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066241:1
position: 1066241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1080624-1080755:1:exon

position:1080624:1
position: 1080624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080755:1
position: 1080755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1080851-1081020:1:exon

position:1080851:1
position: 1080851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081020:1
position: 1081020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1082274-1082297:1:exon

position:1082274:1
position: 1082274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082297:1
position: 1082297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1082877-1083087:1:exon

position:1082877:1
position: 1082877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083087:1
position: 1083087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1085461-1085538:1:exon

position:1085461:1
position: 1085461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085538:1
position: 1085538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1085665-1085857:1:exon

position:1085665:1
position: 1085665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085857:1
position: 1085857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1085953-1086076:1:exon

position:1085953:1
position: 1085953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086076:1
position: 1086076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1086692-1086769:1:exon

position:1086692:1
position: 1086692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086769:1
position: 1086769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1087410-1087577:1:exon

position:1087410:1
position: 1087410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087577:1
position: 1087577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1088322-1088433:1:exon

position:1088322:1
position: 1088322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088433:1
position: 1088433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1089544-1089596:1:exon

position:1089544:1
position: 1089544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089596:1
position: 1089596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1092347-1092419:1:exon

position:1092347:1
position: 1092347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092419:1
position: 1092419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1092868-1092974:1:exon

position:1092868:1
position: 1092868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092974:1
position: 1092974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1093329-1093490:1:exon

position:1093329:1
position: 1093329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093490:1
position: 1093490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1095016-1095114:1:exon

position:1095016:1
position: 1095016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095114:1
position: 1095114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1097444-1097604:1:exon

position:1097444:1
position: 1097444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1097604:1
position: 1097604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1097860-1097966:1:exon

position:1097860:1
position: 1097860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1097966:1
position: 1097966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1103063-1103148:1:exon

position:1103063:1
position: 1103063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103148:1
position: 1103148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1104050-1104558:1:exon

position:1104050:1
position: 1104050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

prkd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: prkd1
product: protein kinase D1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019263210.2
SIO_010081: prkd1
subclass of: SO_0000673
so part of: prkd1
location: join(1053883..1054147,1066103..1066241,1080624..1080755,1080851..1081020,1082877..1083087,1085461..1085538,1085665..1085857,1085953..1086076,1086692..1086769,1087410..1087577,1088322..1088433,1089544..1089596,1092347..1092419,1092868..1092974,1093329..1093490,1095016..1095114,1097444..1097604,1097860..1097966,1103063..1103148,1104050..1104558)
location: region:1053883-1104558:1
so has part: feature:1053883-1054147:1:exon
so has part: feature:1066103-1066241:1:exon
so has part: feature:1080624-1080755:1:exon
so has part: feature:1080851-1081020:1:exon
so has part: feature:1082877-1083087:1:exon
so has part: feature:1085461-1085538:1:exon
so has part: feature:1085665-1085857:1:exon
so has part: feature:1085953-1086076:1:exon
so has part: feature:1086692-1086769:1:exon
so has part: feature:1087410-1087577:1:exon
so has part: feature:1088322-1088433:1:exon
so has part: feature:1089544-1089596:1:exon
so has part: feature:1092347-1092419:1:exon
so has part: feature:1092868-1092974:1:exon
so has part: feature:1093329-1093490:1:exon
so has part: feature:1095016-1095114:1:exon
so has part: feature:1097444-1097604:1:exon
so has part: feature:1097860-1097966:1:exon
so has part: feature:1103063-1103148:1:exon
so has part: feature:1104050-1104558:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1053883-1054147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1066103-1066241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080624-1080755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1080851-1081020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1082877-1083087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1085461-1085538:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1085665-1085857:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1085953-1086076:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1086692-1086769:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1087410-1087577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1088322-1088433:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1089544-1089596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1092347-1092419:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1092868-1092974:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1093329-1093490:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1095016-1095114:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1097444-1097604:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1097860-1097966:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1103063-1103148:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1104050-1104558:1:exon

prkd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: prkd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase D1 isoform X1
translation: MSAPPVIRAPSPLPFSGGTNNINTGTGGGGGGGGGGGGGGGGGGGGGGVISFHIQIGLSREPVLLDAAELSLSQVREVACSIVDQKIPECVFYGMYEKILLFRHDQTSENVLQLLRSASQIQEGDLVEAVLSASATVEDFQIRPHCLFVHSYRAPTFCDHCGEMLWGLVRQGLKCEGCGLNYHKRCAFKIPNNCSGVRRRRSSNVSLTGGLVNMGRPLSAEPSPPHYTDDALLSPVSPSMEQKNQLDYFPGRERRSSSQSYGGRPIELDKILLSKVKVPHTFLIHSYTRPTVCQHCKKLLKGLFRQGLQCKDCKFNCHKRCAPKVPNNCLGEVSKNGELLSPGAESGAEGCLDDHDNDRGGGLLDDMDEALTSEGGLLLEAGPSDLCDMHDPDLDESNRAISPSTSNNIPLMRVVQSVKHTKRKSSNVMKEGWMVHYTSKDTLRKRHYWRLDSKCITLFQNDTGSKYYKEIPLSEILSLEPAQTFSLLPDGANPHCFEIATASLVYYIGENLQRAESSVTSSSILVSGVGQDVARMWEMAIQHALMPAVSTGISHSSHRSGHKEISISISVSNCQIQENVDINSVYQIFPDEVLGSGQFGIVYGGKHRKSGRDVAIKIIDKLRFPTKQESQLRNEVAILQSLHHPGVVNLDCMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRHLHFKNIVHCDLKPENVLLASADSFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPHPWKKVSQEAIDLINNLLQVKMRKRYSVDKTLSHPWLQDYQMWLDLRNLESRMNERYITHESDDLRWHHHAQLSGLDYPTHLANGPRSDIGQGMERYQEQEELETLSERVSEL
SIO_010081: prkd1
subclass of: SO_0000673
so part of: prkd1
location: join(1053890..1054147,1066103..1066241,1080624..1080755,1080851..1081020,1082274..1082297,1082877..1083087,1085461..1085538,1085665..1085857,1085953..1086076,1086692..1086769,1087410..1087577,1088322..1088433,1089544..1089596,1092347..1092419,1092868..1092974,1093329..1093490,1095016..1095114,1097444..1097604,1097860..1097966,1103063..1103148,1104050..1104277)
location: region:1053890-1104277:1
so has part: feature:1053890-1054147:1:exon
so has part: feature:1066103-1066241:1:exon
so has part: feature:1080624-1080755:1:exon
so has part: feature:1080851-1081020:1:exon
so has part: feature:1082274-1082297:1:exon
so has part: feature:1082877-1083087:1:exon
so has part: feature:1085461-1085538:1:exon
so has part: feature:1085665-1085857:1:exon
so has part: feature:1085953-1086076:1:exon
so has part: feature:1086692-1086769:1:exon
so has part: feature:1087410-1087577:1:exon
so has part: feature:1088322-1088433:1:exon
so has part: feature:1089544-1089596:1:exon
so has part: feature:1092347-1092419:1:exon
so has part: feature:1092868-1092974:1:exon
so has part: feature:1093329-1093490:1:exon
so has part: feature:1095016-1095114:1:exon
so has part: feature:1097444-1097604:1:exon
so has part: feature:1097860-1097966:1:exon
so has part: feature:1103063-1103148:1:exon
so has part: feature:1104050-1104277:1:exon

XP_019118753.1
type: Protein
SIO_000068: ncbiprotein

position:1053890:1
position: 1053890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104277:1
position: 1104277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1053890-1054147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1066103-1066241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080624-1080755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1080851-1081020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1082274-1082297:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1082877-1083087:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1085461-1085538:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1085665-1085857:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1085953-1086076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1086692-1086769:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1087410-1087577:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1088322-1088433:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1089544-1089596:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1092347-1092419:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092868-1092974:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1093329-1093490:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1095016-1095114:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1097444-1097604:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1097860-1097966:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1103063-1103148:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1104050-1104277:1:exon

prkd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: prkd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase D1 isoform X2
translation: MSAPPVIRAPSPLPFSGGTNNINTGTGGGGGGGGGGGGGGGGGGGGGGVISFHIQIGLSREPVLLDAAELSLSQVREVACSIVDQKIPECVFYGMYEKILLFRHDQTSENVLQLLRSASQIQEGDLVEAVLSASATVEDFQIRPHCLFVHSYRAPTFCDHCGEMLWGLVRQGLKCEGCGLNYHKRCAFKIPNNCSGVRRRRSSNVSLTGGLVNMGRPLSAEPSPPHYTDDALLQKNQLDYFPGRERRSSSQSYGGRPIELDKILLSKVKVPHTFLIHSYTRPTVCQHCKKLLKGLFRQGLQCKDCKFNCHKRCAPKVPNNCLGEVSKNGELLSPGAESGAEGCLDDHDNDRGGGLLDDMDEALTSEGGLLLEAGPSDLCDMHDPDLDESNRAISPSTSNNIPLMRVVQSVKHTKRKSSNVMKEGWMVHYTSKDTLRKRHYWRLDSKCITLFQNDTGSKYYKEIPLSEILSLEPAQTFSLLPDGANPHCFEIATASLVYYIGENLQRAESSVTSSSILVSGVGQDVARMWEMAIQHALMPAVSTGISHSSHRSGHKEISISISVSNCQIQENVDINSVYQIFPDEVLGSGQFGIVYGGKHRKSGRDVAIKIIDKLRFPTKQESQLRNEVAILQSLHHPGVVNLDCMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRHLHFKNIVHCDLKPENVLLASADSFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPHPWKKVSQEAIDLINNLLQVKMRKRYSVDKTLSHPWLQDYQMWLDLRNLESRMNERYITHESDDLRWHHHAQLSGLDYPTHLANGPRSDIGQGMERYQEQEELETLSERVSEL
SIO_010081: prkd1
subclass of: SO_0000673
so part of: prkd1
location: join(1053890..1054147,1066103..1066241,1080624..1080755,1080851..1081020,1082877..1083087,1085461..1085538,1085665..1085857,1085953..1086076,1086692..1086769,1087410..1087577,1088322..1088433,1089544..1089596,1092347..1092419,1092868..1092974,1093329..1093490,1095016..1095114,1097444..1097604,1097860..1097966,1103063..1103148,1104050..1104277)
location: region:1053890-1104277:1
so has part: feature:1053890-1054147:1:exon
so has part: feature:1066103-1066241:1:exon
so has part: feature:1080624-1080755:1:exon
so has part: feature:1080851-1081020:1:exon
so has part: feature:1082877-1083087:1:exon
so has part: feature:1085461-1085538:1:exon
so has part: feature:1085665-1085857:1:exon
so has part: feature:1085953-1086076:1:exon
so has part: feature:1086692-1086769:1:exon
so has part: feature:1087410-1087577:1:exon
so has part: feature:1088322-1088433:1:exon
so has part: feature:1089544-1089596:1:exon
so has part: feature:1092347-1092419:1:exon
so has part: feature:1092868-1092974:1:exon
so has part: feature:1093329-1093490:1:exon
so has part: feature:1095016-1095114:1:exon
so has part: feature:1097444-1097604:1:exon
so has part: feature:1097860-1097966:1:exon
so has part: feature:1103063-1103148:1:exon
so has part: feature:1104050-1104277:1:exon

XP_019118755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1053890-1054147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1066103-1066241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080624-1080755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1080851-1081020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1082877-1083087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1085461-1085538:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1085665-1085857:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1085953-1086076:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1086692-1086769:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1087410-1087577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1088322-1088433:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1089544-1089596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1092347-1092419:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1092868-1092974:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1093329-1093490:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1095016-1095114:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1097444-1097604:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1097860-1097966:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1103063-1103148:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1104050-1104277:1:exon

foxg1
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: foxg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1255906..1287151)
location: region:1255906-1287151:-1
so has part: feature:1255906-1287151:-1:exon
subclass of: SO_0000010

104927437
type: Gene
SIO_000068: ncbigene

position:1255906:-1
position: 1255906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287151:-1
position: 1287151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1255906-1287151:-1:exon

foxg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: foxg1
product: forkhead box G1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010741515.3
SIO_010081: foxg1
subclass of: SO_0000673
so part of: foxg1
location: complement(join(1255906..1256456,1285251..1287151))
location: region:1255906-1287151:-1
so has part: feature:1285251-1287151:-1:exon
so has part: feature:1255906-1256456:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285251-1287151:-1:exon

position:1285251:-1
position: 1285251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1255906-1256456:-1:exon

position:1256456:-1
position: 1256456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

foxg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: foxg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein G1
translation: MLDMGERKEVKMIPKSSFSINSLVPEAVQSDNNNHQNQHHHQSHHHQNHHHHRTGGVDEAEQKAPLPAVQQDSKADPKSDSSSQESCTDEKEKQQEEKKDGKDGDGGAGGKDGEKKSGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTTSRAKLAFKRGARLTSGLTFMDRAGSLYWPMSPFLSLHHPRASGALGYNGTSSGYPGHPMSYSTMLTQNMGNNHSSFPSSNGLSMDRLVGGDLPYATHHLTAAALAASAVPCGLSVPCSGATYSLNPCSVNLLAGQTSYFFPHVPHPSMTTQTGGSGGGSLQAARASASNSPQAPSSSSLSCDSLRPTLSGSLPAFSSGLSGGLSDYFTHQNQGSTSNPLIH
SIO_010081: foxg1
subclass of: SO_0000673
so part of: foxg1
location: complement(1285508..1286833)
location: region:1285508-1286833:-1
so has part: feature:1285508-1286833:-1:exon

XP_010739817.1
type: Protein
SIO_000068: ncbiprotein

position:1285508:-1
position: 1285508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286833:-1
position: 1286833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1285508-1286833:-1:exon

sptbn5
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: sptbn5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1294611..1342665)
location: region:1294611-1342665:-1
so has part: feature:1294611-1342665:-1:exon
subclass of: SO_0000010

104927441
type: Gene
SIO_000068: ncbigene

position:1294611:-1
position: 1294611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1342665:-1
position: 1342665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294611-1342665:-1:exon

sptbn5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: sptbn5
product: spectrin beta, non-erythrocytic 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027278753.1
SIO_010081: sptbn5
subclass of: SO_0000673
so part of: sptbn5
location: complement(join(1294611..1296924,1297023..1297207,1300558..1300674,1301828..1301919,1302010..1302093,1302623..1302691,1302780..1303748,1303839..1303946,1306429..1306605,1306700..1306889,1307061..1307278,1307874..1308023,1308097..1308276,1308749..1308953,1309061..1309257,1309334..1309477,1309564..1309632,1309751..1309937,1310039..1310127,1310210..1310377,1311127..1311264,1311416..1311562,1311790..1311880,1312003..1312175,1312277..1312354,1312445..1312633,1312735..1312897,1313065..1313186,1313780..1313893,1313987..1314101,1314172..1314293,1314676..1314771,1314854..1315045,1315388..1315543,1315779..1315967,1316196..1316300,1316386..1316535,1316613..1316816,1316903..1317082,1317963..1318073,1318151..1318265,1318459..1318604,1318834..1318966,1319954..1320111,1320471..1320587,1321112..1321202,1321310..1321419,1321597..1321783,1321916..1322052,1322179..1322268,1322562..1322726,1322816..1322986,1323375..1323474,1324041..1324180,1324285..1324534,1324668..1324879,1325341..1325416,1326663..1326914,1327038..1327168,1327312..1327464,1327549..1327761,1327887..1328023,1328414..1328585,1328964..1329170,1329601..1329804,1330756..1330909,1331037..1331125,1331446..1331580,1333415..1333553,1333685..1333905,1334056..1334189,1334348..1334432,1335654..1335761,1335842..1335928,1336067..1336295,1336404..1336561,1336764..1336880,1337939..1338106,1342552..1342665))
location: region:1294611-1342665:-1
so has part: feature:1342552-1342665:-1:exon
so has part: feature:1337939-1338106:-1:exon
so has part: feature:1336764-1336880:-1:exon
so has part: feature:1336404-1336561:-1:exon
so has part: feature:1336067-1336295:-1:exon
so has part: feature:1335842-1335928:-1:exon
so has part: feature:1335654-1335761:-1:exon
so has part: feature:1334348-1334432:-1:exon
so has part: feature:1334056-1334189:-1:exon
so has part: feature:1333685-1333905:-1:exon
so has part: feature:1333415-1333553:-1:exon
so has part: feature:1331446-1331580:-1:exon
so has part: feature:1331037-1331125:-1:exon
so has part: feature:1330756-1330909:-1:exon
so has part: feature:1329601-1329804:-1:exon
so has part: feature:1328964-1329170:-1:exon
so has part: feature:1328414-1328585:-1:exon
so has part: feature:1327887-1328023:-1:exon
so has part: feature:1327549-1327761:-1:exon
so has part: feature:1327312-1327464:-1:exon
so has part: feature:1327038-1327168:-1:exon
so has part: feature:1326663-1326914:-1:exon
so has part: feature:1325341-1325416:-1:exon
so has part: feature:1324668-1324879:-1:exon
so has part: feature:1324285-1324534:-1:exon
so has part: feature:1324041-1324180:-1:exon
so has part: feature:1323375-1323474:-1:exon
so has part: feature:1322816-1322986:-1:exon
so has part: feature:1322562-1322726:-1:exon
so has part: feature:1322179-1322268:-1:exon
so has part: feature:1321916-1322052:-1:exon
so has part: feature:1321597-1321783:-1:exon
so has part: feature:1321310-1321419:-1:exon
so has part: feature:1321112-1321202:-1:exon
so has part: feature:1320471-1320587:-1:exon
so has part: feature:1319954-1320111:-1:exon
so has part: feature:1318834-1318966:-1:exon
so has part: feature:1318459-1318604:-1:exon
so has part: feature:1318151-1318265:-1:exon
so has part: feature:1317963-1318073:-1:exon
so has part: feature:1316903-1317082:-1:exon
so has part: feature:1316613-1316816:-1:exon
so has part: feature:1316386-1316535:-1:exon
so has part: feature:1316196-1316300:-1:exon
so has part: feature:1315779-1315967:-1:exon
so has part: feature:1315388-1315543:-1:exon
so has part: feature:1314854-1315045:-1:exon
so has part: feature:1314676-1314771:-1:exon
so has part: feature:1314172-1314293:-1:exon
so has part: feature:1313987-1314101:-1:exon
so has part: feature:1313780-1313893:-1:exon
so has part: feature:1313065-1313186:-1:exon
so has part: feature:1312735-1312897:-1:exon
so has part: feature:1312445-1312633:-1:exon
so has part: feature:1312277-1312354:-1:exon
so has part: feature:1312003-1312175:-1:exon
so has part: feature:1311790-1311880:-1:exon
so has part: feature:1311416-1311562:-1:exon
so has part: feature:1311127-1311264:-1:exon
so has part: feature:1310210-1310377:-1:exon
so has part: feature:1310039-1310127:-1:exon
so has part: feature:1309751-1309937:-1:exon
so has part: feature:1309564-1309632:-1:exon
so has part: feature:1309334-1309477:-1:exon
so has part: feature:1309061-1309257:-1:exon
so has part: feature:1308749-1308953:-1:exon
so has part: feature:1308097-1308276:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1342552-1342665:-1:exon

position:1342552:-1
position: 1342552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1337939-1338106:-1:exon

position:1337939:-1
position: 1337939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338106:-1
position: 1338106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1336764-1336880:-1:exon

position:1336764:-1
position: 1336764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1336880:-1
position: 1336880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1336404-1336561:-1:exon

position:1336404:-1
position: 1336404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1336561:-1
position: 1336561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1336067-1336295:-1:exon

position:1336067:-1
position: 1336067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1336295:-1
position: 1336295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1335842-1335928:-1:exon

position:1335842:-1
position: 1335842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335928:-1
position: 1335928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1335654-1335761:-1:exon

position:1335654:-1
position: 1335654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335761:-1
position: 1335761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1334348-1334432:-1:exon

position:1334348:-1
position: 1334348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1334432:-1
position: 1334432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1334056-1334189:-1:exon

position:1334056:-1
position: 1334056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1334189:-1
position: 1334189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1333685-1333905:-1:exon

position:1333685:-1
position: 1333685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333905:-1
position: 1333905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1333415-1333553:-1:exon

position:1333415:-1
position: 1333415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333553:-1
position: 1333553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1331446-1331580:-1:exon

position:1331446:-1
position: 1331446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331580:-1
position: 1331580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1331037-1331125:-1:exon

position:1331037:-1
position: 1331037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331125:-1
position: 1331125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1330756-1330909:-1:exon

position:1330756:-1
position: 1330756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1330909:-1
position: 1330909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1329601-1329804:-1:exon

position:1329601:-1
position: 1329601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329804:-1
position: 1329804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1328964-1329170:-1:exon

position:1328964:-1
position: 1328964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329170:-1
position: 1329170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1328414-1328585:-1:exon

position:1328414:-1
position: 1328414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328585:-1
position: 1328585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1327887-1328023:-1:exon

position:1327887:-1
position: 1327887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328023:-1
position: 1328023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1327549-1327761:-1:exon

position:1327549:-1
position: 1327549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327761:-1
position: 1327761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1327312-1327464:-1:exon

position:1327312:-1
position: 1327312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327464:-1
position: 1327464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1327038-1327168:-1:exon

position:1327038:-1
position: 1327038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327168:-1
position: 1327168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1326663-1326914:-1:exon

position:1326663:-1
position: 1326663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326914:-1
position: 1326914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1325341-1325416:-1:exon

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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
SIO_000628: feature:1324285-1324534:-1:exon

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urn:…
SIO_000300: 26
SIO_000628: feature:1324041-1324180:-1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:1323375-1323474:-1:exon

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urn:…
SIO_000300: 28
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urn:…
SIO_000300: 29
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urn:…
SIO_000300: 30
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urn:…
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urn:…
SIO_000300: 32
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urn:…
SIO_000300: 33
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urn:…
SIO_000300: 34
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urn:…
SIO_000300: 35
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urn:…
SIO_000300: 36
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urn:…
SIO_000300: 37
SIO_000628: feature:1318834-1318966:-1:exon

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urn:…
SIO_000300: 38
SIO_000628: feature:1318459-1318604:-1:exon

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urn:…
SIO_000300: 39
SIO_000628: feature:1318151-1318265:-1:exon

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SIO_000300: 40
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urn:…
SIO_000300: 41
SIO_000628: feature:1316903-1317082:-1:exon

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urn:…
SIO_000300: 42
SIO_000628: feature:1316613-1316816:-1:exon

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urn:…
SIO_000300: 43
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urn:…
SIO_000300: 44
SIO_000628: feature:1316196-1316300:-1:exon

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urn:…
SIO_000300: 45
SIO_000628: feature:1315779-1315967:-1:exon

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urn:…
SIO_000300: 46
SIO_000628: feature:1315388-1315543:-1:exon

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urn:…
SIO_000300: 47
SIO_000628: feature:1314854-1315045:-1:exon

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urn:…
SIO_000300: 48
SIO_000628: feature:1314676-1314771:-1:exon

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urn:…
SIO_000300: 49
SIO_000628: feature:1314172-1314293:-1:exon

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urn:…
SIO_000300: 50
SIO_000628: feature:1313987-1314101:-1:exon

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urn:…
SIO_000300: 51
SIO_000628: feature:1313780-1313893:-1:exon

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urn:…
SIO_000300: 52
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urn:…
SIO_000300: 53
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urn:…
SIO_000300: 54
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urn:…
SIO_000300: 55
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urn:…
SIO_000300: 56
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urn:…
SIO_000300: 57
SIO_000628: feature:1311790-1311880:-1:exon

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urn:…
SIO_000300: 58
SIO_000628: feature:1311416-1311562:-1:exon

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urn:…
SIO_000300: 59
SIO_000628: feature:1311127-1311264:-1:exon

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urn:…
SIO_000300: 60
SIO_000628: feature:1310210-1310377:-1:exon

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urn:…
SIO_000300: 61
SIO_000628: feature:1310039-1310127:-1:exon

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urn:…
SIO_000300: 62
SIO_000628: feature:1309751-1309937:-1:exon

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urn:…
SIO_000300: 63
SIO_000628: feature:1309564-1309632:-1:exon

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urn:…
SIO_000300: 64
SIO_000628: feature:1309334-1309477:-1:exon

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urn:…
SIO_000300: 65
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urn:…
SIO_000300: 66
SIO_000628: feature:1308749-1308953:-1:exon

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urn:…
SIO_000300: 67
SIO_000628: feature:1308097-1308276:-1:exon

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urn:…
SIO_000300: 68
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urn:…
SIO_000300: 69
SIO_000628: feature:1307061-1307278:-1:exon

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urn:…
SIO_000300: 70
SIO_000628: feature:1306700-1306889:-1:exon

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urn:…
SIO_000300: 71
SIO_000628: feature:1306429-1306605:-1:exon

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urn:…
SIO_000300: 72
SIO_000628: feature:1303839-1303946:-1:exon

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urn:…
SIO_000300: 73
SIO_000628: feature:1302780-1303748:-1:exon

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urn:…
SIO_000300: 74
SIO_000628: feature:1302623-1302691:-1:exon

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urn:…
SIO_000300: 75
SIO_000628: feature:1302010-1302093:-1:exon

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urn:…
SIO_000300: 76
SIO_000628: feature:1301828-1301919:-1:exon

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urn:…
SIO_000300: 77
SIO_000628: feature:1300558-1300674:-1:exon

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urn:…
SIO_000300: 78
SIO_000628: feature:1297023-1297207:-1:exon

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urn:…
SIO_000300: 79
SIO_000628: feature:1294611-1296924:-1:exon

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sptbn5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: sptbn5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spectrin beta chain, non-erythrocytic 5
translation: MEGEEDGAGRVRELQEQRMAVQKKTFTKWMNSVFTKNGDRVELTDVYTELKTGVALIRLLELISKETLPAPSRGKLRVHNLENNSIAISFLKTKIRVDLIGPENVVDGDRTLILGLLWIIILRFQIGPINLDEAGGGGSVAHRSAKEALLIWCQMKTAGYNGVDVQDFSSSWRNGLAFNALIHAHRPDLFDYHRLHGDDPRRNLEHAFSLAERQFGIMQLLEVEDIVVPHPDEKSIMTYVSLYYHYFSKMKQGQTIQKRLAKIVGLLMELDDMKVQYERLVSDLLHWIKTKVVQLNDRRFPNSVRELQKLMTAFKTYRTVEKPPKYQERGAIEAHLFSLKTQLAANNQWAYNPPDGKTLGDIEKSWVLLERAEHERERALQEALLRLENLEQLAQKFERKAALRDGYLEDTLRLLRRQDIRGLSTLEEAQAAGRRLEALATDALAREPRFSALRDMAETVERGNYHGKEQIIRREESIDHRWKDLLQQLQEQRSLLGNVVENLSILRDIELVSQELKELQSQASSSELGKQLAEVESLLQKQDLLEAQISAHGETIAVISSTTLKVKVRDGQQIQSRVRALDTQYKSLVSHSSNRRRQLEAQLRLFEFFYDCEELEAWLYEHWLRLQTSGLGRDLNQIQLSQHKHKILEAELQAQESLYQGVQGRGQDLLSKQSQMNQRAIQKWIRTLKKQWGHLIDDATGRRNRLEAAAAIKQYFADVAEANSWLGDRKPLLTSEDHGKDESSTTALLQRHLRIEKEMAAYGSEIKRLSEQARSAAQLTALTEEPQQSKMIQYSDSSGDEEGPGAVTSPPPSARAVRSSGSSPSQSESSMAKVRFRYKRGQFPWDRNEVLTIISTESDGDRVLARDSQGNQQLIPKTYLMLMPATAPPPMPPASTNGVTESPIRKLSRPRRSRSMRRGTAEIQTTTLPDPQYQRDTVEGTQASLDQDYNSLYKLVKLKLRSLEETLRLHRFSNSCQEFESWMEDKENVLNTFSIDADNLGVVQAKYENFLTELASGRGQLDDIIRMAEELVKSRHSKHREIKDRQRKVSSRWDQIQRLKEEKAHELLSTADVQSFLQSCEEAKAQLQDQLSGFDTVDVGCSSFTLQAEEKNQAQAIRDIQTLEAKIAYLKSVAKMKQDCSPAESAAISEEVRGLEALLNQLKHQAGDRQRVLEEARRLQSFQQQAKELQRWAGSVQDHLLQEETATDVASAVALLEQHQELRLEMEEQRRRLKEMEKLGKSFQQGSSDGKIGGVDIQQTLDKLYADWSKLDKMWTSRKVLLEQEVELQKLNQEGDRIEAALSGHEARLRVKDVGDSVDSVHSLLGRQDELEGLLKALDQQVGHFTERSQELINQKHYAAKHIKERSRSIQKANKRLKESSRQRRSLLLASKKFQEFQRDSDELLLWMEEKFKVAEDESYRDPTNILRKLKKHEAAEKEMQANQVWLDKLVQLGQEMVDEEHYNSKSIKKKSSQLSSRWSRLQDKMADRGDKLRQAGQQEQLMELLQDAKLKIEAIQWMLNNAAKGHDLRSCRQLLKEHQQLEQEAKELAEKINSIISRAKHLASNHFDSQRILQETDTYLTLFKSLQKPLDRRRAQLEASVLLFGFYHDVDLELSWISEHVPASGSTGYDKSLAGAISLMQKHKELQVEVTAHRKHLNHVLQKGRGLAKSSKSEGEEVLQRCSHLSREWEELEEACNSRAAHLSKAITREQLLLDCSELESRLNETLGLVNTDDYGKDQLATQSLITKHQVVEGQLEVLEVEVEKLGEQVEQAVQNWRLEELSRPYSRLSSLNQELQHQAALRGQRLKEVLHLHEFRRESSELADWMNQQRQTAESQDLGNDYQHVQLLRGKFEGFLKQLEVGEERLQSCNDLAARLIRNKHPQSSAVRETLQELSACWEDLMGVAIERQEQLQRAEECHRFYQDLADSLTLIQERQKSIPDDVAKDLRGVMSQLRKHEALLHELAITEQQLKEQLDAVDTILDLCTPQLKRRLEEVQQ…
SIO_010081: sptbn5
subclass of: SO_0000673
so part of: sptbn5
location: complement(join(1296767..1296924,1297023..1297207,1300558..1300674,1301828..1301919,1302010..1302093,1302623..1302691,1302780..1303748,1303839..1303946,1306429..1306605,1306700..1306889,1307061..1307278,1307874..1308023,1308097..1308276,1308749..1308953,1309061..1309257,1309334..1309477,1309564..1309632,1309751..1309937,1310039..1310127,1310210..1310377,1311127..1311264,1311416..1311562,1311790..1311880,1312003..1312175,1312277..1312354,1312445..1312633,1312735..1312897,1313065..1313186,1313780..1313893,1313987..1314101,1314172..1314293,1314676..1314771,1314854..1315045,1315388..1315543,1315779..1315967,1316196..1316300,1316386..1316535,1316613..1316816,1316903..1317082,1317963..1318073,1318151..1318265,1318459..1318604,1318834..1318966,1319954..1320111,1320471..1320587,1321112..1321202,1321310..1321419,1321597..1321783,1321916..1322052,1322179..1322268,1322562..1322726,1322816..1322986,1323375..1323474,1324041..1324180,1324285..1324534,1324668..1324879,1325341..1325416,1326663..1326914,1327038..1327168,1327312..1327464,1327549..1327761,1327887..1328023,1328414..1328585,1328964..1329170,1329601..1329804,1330756..1330909,1331037..1331125,1331446..1331580,1333415..1333553,1333685..1333905,1334056..1334189,1334348..1334432,1335654..1335761,1335842..1335928,1336067..1336295,1336404..1336561,1336764..1336880,1337939..1338106,1342552..1342665))
location: region:1296767-1342665:-1
so has part: feature:1342552-1342665:-1:exon
so has part: feature:1337939-1338106:-1:exon
so has part: feature:1336764-1336880:-1:exon
so has part: feature:1336404-1336561:-1:exon
so has part: feature:1336067-1336295:-1:exon
so has part: feature:1335842-1335928:-1:exon
so has part: feature:1335654-1335761:-1:exon
so has part: feature:1334348-1334432:-1:exon
so has part: feature:1334056-1334189:-1:exon
so has part: feature:1333685-1333905:-1:exon
so has part: feature:1333415-1333553:-1:exon
so has part: feature:1331446-1331580:-1:exon
so has part: feature:1331037-1331125:-1:exon
so has part: feature:1330756-1330909:-1:exon
so has part: feature:1329601-1329804:-1:exon
so has part: feature:1328964-1329170:-1:exon
so has part: feature:1328414-1328585:-1:exon
so has part: feature:1327887-1328023:-1:exon
so has part: feature:1327549-1327761:-1:exon
so has part: feature:1327312-1327464:-1:exon
so has part: feature:1327038-1327168:-1:exon
so has part: feature:1326663-1326914:-1:exon
so has part: feature:1325341-1325416:-1:exon
so has part: feature:1324668-1324879:-1:exon
so has part: feature:1324285-1324534:-1:exon
so has part: feature:1324041-1324180:-1:exon
so has part: feature:1323375-1323474:-1:exon
so has part: feature:1322816-1322986:-1:exon
so has part: feature:1322562-1322726:-1:exon
so has part: feature:1322179-1322268:-1:exon
so has part: feature:1321916-1322052:-1:exon
so has part: feature:1321597-1321783:-1:exon
so has part: feature:1321310-1321419:-1:exon
so has part: feature:1321112-1321202:-1:exon
so has part: feature:1320471-1320587:-1:exon
so has part: feature:1319954-1320111:-1:exon
so has part: feature:1318834-1318966:-1:exon
so has part: feature:1318459-1318604:-1:exon
so has part: feature:1318151-1318265:-1:exon
so has part: feature:1317963-1318073:-1:exon
so has part: feature:1316903-1317082:-1:exon
so has part: feature:1316613-1316816:-1:exon
so has part: feature:1316386-1316535:-1:exon
so has part: feature:1316196-1316300:-1:exon
so has part: feature:1315779-1315967:-1:exon
so has part: feature:1315388-1315543:-1:exon
so has part: feature:1314854-1315045:-1:exon
so has part: feature:1314676-1314771:-1:exon
so has part: feature:1314172-1314293:-1:exon
so has part: feature:1313987-1314101:-1:exon
so has part: feature:1313780-1313893:-1:exon
so has part: feature:1313065-1313186:-1:exon
so has part: feature:1312735-1312897:-1:exon
so has part: feature:1312445-1312633:-1:exon
so has part: feature:1312277-1312354:-1:exon
so has part: feature:1312003-1312175:-1:exon
so has part: feature:1311790-1311880:-1:exon
so has part: feature:1311416-1311562:-1:exon
so has part: feature:1311127-1311264:-1:exon
so has part: feature:1310210-1310377:-1:exon
so has part: feature:1310039-1310127:-1:exon
so has part: feature:1309751-1309937:-1:exon
so has part: feature:1309564-1309632:-1:exon
so has part: feature:1309334-1309477:-1:exon
so has part: feature:1309061-1309257:-1:exon
so has part: feature:1308749-1308953:-1:exon

XP_027134554.1
type: Protein
SIO_000068: ncbiprotein

position:1296767:-1
position: 1296767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1342552-1342665:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1337939-1338106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1336764-1336880:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1336404-1336561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1336067-1336295:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1335842-1335928:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1335654-1335761:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1334348-1334432:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1334056-1334189:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1333685-1333905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1333415-1333553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1331446-1331580:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1331037-1331125:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1330756-1330909:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1329601-1329804:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1328964-1329170:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1328414-1328585:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1327887-1328023:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1327549-1327761:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1327312-1327464:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1327038-1327168:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1326663-1326914:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1325341-1325416:-1:exon

urn:…
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SIO_000628: feature:1324668-1324879:-1:exon

urn:…
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SIO_000628: feature:1324285-1324534:-1:exon

urn:…
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SIO_000628: feature:1324041-1324180:-1:exon

urn:…
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SIO_000628: feature:1323375-1323474:-1:exon

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SIO_000628: feature:1322816-1322986:-1:exon

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SIO_000628: feature:1322562-1322726:-1:exon

urn:…
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SIO_000628: feature:1322179-1322268:-1:exon

urn:…
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SIO_000628: feature:1321916-1322052:-1:exon

urn:…
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SIO_000628: feature:1321597-1321783:-1:exon

urn:…
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SIO_000628: feature:1321310-1321419:-1:exon

urn:…
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SIO_000628: feature:1321112-1321202:-1:exon

urn:…
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SIO_000628: feature:1320471-1320587:-1:exon

urn:…
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SIO_000628: feature:1319954-1320111:-1:exon

urn:…
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SIO_000628: feature:1318834-1318966:-1:exon

urn:…
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SIO_000628: feature:1318459-1318604:-1:exon

urn:…
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SIO_000628: feature:1318151-1318265:-1:exon

urn:…
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SIO_000628: feature:1317963-1318073:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 78
SIO_000628: feature:1297023-1297207:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:1296767-1296924:-1:exon

LOC104927440
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104927440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1348322..1388181)
location: region:1348322-1388181:-1
so has part: feature:1348322-1388181:-1:exon
subclass of: SO_0000010

104927440
type: Gene
SIO_000068: ncbigene

position:1348322:-1
position: 1348322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1388181:-1
position: 1388181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348322-1388181:-1:exon

LOC104927440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104927440
product: EH domain-containing protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_019263220.2
SIO_010081: LOC104927440
subclass of: SO_0000673
so part of: LOC104927440
location: complement(join(1348322..1352292,1354007..1354171,1357851..1357962,1358221..1358354,1358449..1358615,1377634..1377731,1382434..1382610,1387642..1388181))
location: region:1348322-1388181:-1
so has part: feature:1387642-1388181:-1:exon
so has part: feature:1382434-1382610:-1:exon
so has part: feature:1377634-1377731:-1:exon
so has part: feature:1358449-1358615:-1:exon
so has part: feature:1358221-1358354:-1:exon
so has part: feature:1357851-1357962:-1:exon
so has part: feature:1354007-1354171:-1:exon
so has part: feature:1348322-1352292:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1387642-1388181:-1:exon

position:1387642:-1
position: 1387642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1382434-1382610:-1:exon

position:1382434:-1
position: 1382434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382610:-1
position: 1382610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1377634-1377731:-1:exon

position:1377634:-1
position: 1377634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1377731:-1
position: 1377731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1358449-1358615:-1:exon

position:1358449:-1
position: 1358449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358615:-1
position: 1358615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1358221-1358354:-1:exon

position:1358221:-1
position: 1358221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358354:-1
position: 1358354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1357851-1357962:-1:exon

position:1357851:-1
position: 1357851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357962:-1
position: 1357962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1354007-1354171:-1:exon

position:1354007:-1
position: 1354007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354171:-1
position: 1354171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1348322-1352292:-1:exon

position:1352292:-1
position: 1352292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104927440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104927440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EH domain-containing protein 4
translation: MFSWVKQEQGGRNKEGEMYQTVTEGLQTLYTKKLLPLEETYLFHDFHSPALEAADFQSKPMVLLVGQYSTGKTTFIRYLLEQDFPGMRIGPEPTTDGFIAVMYGENEGVVPGNALVVDPKKPFRKLNAFGNSFLNRFICSQMPNQVLQSISIIDTPGILSGEKQRISRGYDFAEVLRWFGERVDRIILLFDAHKLDISDEFSEAIKAFKGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVVRVYLGSFWAKPLQNTENRRLFEAESQDLFRDIQGLPRNAALRKLNDLIKRARLAKVHAYIISYLKKEMPSLFGREKKKEELIMRLPEIYTILQREHHISPGDFPNVTKMQDMLQHYDFSKFPSLKMKLIESVDKMLATKIAVLMTMIREEESKQPPAMVSGGAFEGSQDGPFGHGYGEGISAGADADDWIISREKHRYDEIFYMLMPINGKITGVNAKKEMMNSRLPNTVLGKIWKLADCDQDGMLDDEEFALAQHLIKIKLEGYELPTELPDHLVPPSHRKNPTAEALYNHSED
SIO_010081: LOC104927440
subclass of: SO_0000673
so part of: LOC104927440
location: complement(join(1351735..1352292,1354007..1354171,1357851..1357962,1358221..1358354,1358449..1358615,1377634..1377731,1382434..1382610,1387642..1387871))
location: region:1351735-1387871:-1
so has part: feature:1387642-1387871:-1:exon
so has part: feature:1382434-1382610:-1:exon
so has part: feature:1377634-1377731:-1:exon
so has part: feature:1358449-1358615:-1:exon
so has part: feature:1358221-1358354:-1:exon
so has part: feature:1357851-1357962:-1:exon
so has part: feature:1354007-1354171:-1:exon
so has part: feature:1351735-1352292:-1:exon

XP_019118765.1
type: Protein
SIO_000068: ncbiprotein

position:1351735:-1
position: 1351735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1387871:-1
position: 1387871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1387642-1387871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1382434-1382610:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1377634-1377731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358449-1358615:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1358221-1358354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357851-1357962:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1354007-1354171:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1351735-1352292:-1:exon

LOC104927436
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104927436
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1390251..1401170
location: region:1390251-1401170:1
so has part: feature:1390251-1401170:1:exon
subclass of: SO_0000010

104927436
type: Gene
SIO_000068: ncbigene

position:1390251:1
position: 1390251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401170:1
position: 1401170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1390251-1401170:1:exon

LOC104927436
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104927436
product: G2/M phase-specific E3 ubiquitin-protein ligase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019263202.2
SIO_010081: LOC104927436
subclass of: SO_0000673
so part of: LOC104927436
location: join(1390251..1390408,1393668..1393742,1393960..1394057,1394479..1394580,1394750..1394874,1395195..1395363,1395556..1395662,1395870..1395986,1396198..1396322,1396414..1396501,1396576..1396746,1396842..1396996,1397134..1397318,1397410..1397582,1398468..1398507,1398594..1398765,1399307..1399605,1399814..1401170)
location: region:1390251-1401170:1
so has part: feature:1390251-1390408:1:exon
so has part: feature:1393668-1393742:1:exon
so has part: feature:1393960-1394057:1:exon
so has part: feature:1394479-1394580:1:exon
so has part: feature:1394750-1394874:1:exon
so has part: feature:1395195-1395363:1:exon
so has part: feature:1395556-1395662:1:exon
so has part: feature:1395870-1395986:1:exon
so has part: feature:1396198-1396322:1:exon
so has part: feature:1396414-1396501:1:exon
so has part: feature:1396576-1396746:1:exon
so has part: feature:1396842-1396996:1:exon
so has part: feature:1397134-1397318:1:exon
so has part: feature:1397410-1397582:1:exon
so has part: feature:1398468-1398507:1:exon
so has part: feature:1398594-1398765:1:exon
so has part: feature:1399307-1399605:1:exon
so has part: feature:1399814-1401170:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1390251-1390408:1:exon

position:1390408:1
position: 1390408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1393668-1393742:1:exon

position:1393668:1
position: 1393668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393742:1
position: 1393742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1393960-1394057:1:exon

position:1393960:1
position: 1393960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1394057:1
position: 1394057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1394479-1394580:1:exon

position:1394479:1
position: 1394479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1394580:1
position: 1394580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1394750-1394874:1:exon

position:1394750:1
position: 1394750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1394874:1
position: 1394874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1395195-1395363:1:exon

position:1395195:1
position: 1395195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1395363:1
position: 1395363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1395556-1395662:1:exon

position:1395556:1
position: 1395556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1395662:1
position: 1395662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1395870-1395986:1:exon

position:1395870:1
position: 1395870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1395986:1
position: 1395986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1396198-1396322:1:exon

position:1396198:1
position: 1396198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1396322:1
position: 1396322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1396414-1396501:1:exon

position:1396414:1
position: 1396414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1396501:1
position: 1396501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1396576-1396746:1:exon

position:1396576:1
position: 1396576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1396746:1
position: 1396746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1396842-1396996:1:exon

position:1396842:1
position: 1396842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1396996:1
position: 1396996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1397134-1397318:1:exon

position:1397134:1
position: 1397134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1397318:1
position: 1397318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1397410-1397582:1:exon

position:1397410:1
position: 1397410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1397582:1
position: 1397582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1398468-1398507:1:exon

position:1398468:1
position: 1398468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398507:1
position: 1398507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1398594-1398765:1:exon

position:1398594:1
position: 1398594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398765:1
position: 1398765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1399307-1399605:1:exon

position:1399307:1
position: 1399307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1399605:1
position: 1399605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1399814-1401170:1:exon

position:1399814:1
position: 1399814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104927436
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104927436
product: G2/M phase-specific E3 ubiquitin-protein ligase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_010741514.3
SIO_010081: LOC104927436
subclass of: SO_0000673
so part of: LOC104927436
location: join(1390252..1390408,1393668..1393742,1393960..1394057,1394479..1394580,1394750..1394874,1395195..1395363,1395556..1395662,1395870..1395986,1396198..1396322,1396414..1396501,1396576..1396746,1396842..1396996,1397134..1397318,1397410..1397582,1398468..1398507,1398594..1398765,1399307..1401170)
location: region:1390252-1401170:1
so has part: feature:1390252-1390408:1:exon
so has part: feature:1393668-1393742:1:exon
so has part: feature:1393960-1394057:1:exon
so has part: feature:1394479-1394580:1:exon
so has part: feature:1394750-1394874:1:exon
so has part: feature:1395195-1395363:1:exon
so has part: feature:1395556-1395662:1:exon
so has part: feature:1395870-1395986:1:exon
so has part: feature:1396198-1396322:1:exon
so has part: feature:1396414-1396501:1:exon
so has part: feature:1396576-1396746:1:exon
so has part: feature:1396842-1396996:1:exon
so has part: feature:1397134-1397318:1:exon
so has part: feature:1397410-1397582:1:exon
so has part: feature:1398468-1398507:1:exon
so has part: feature:1398594-1398765:1:exon
so has part: feature:1399307-1401170:1:exon

position:1390252:1
position: 1390252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1390252-1390408:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1393668-1393742:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1393960-1394057:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1394479-1394580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1394750-1394874:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1395195-1395363:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1395556-1395662:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1395870-1395986:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1396198-1396322:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1396414-1396501:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1396576-1396746:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1396842-1396996:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1397134-1397318:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1397410-1397582:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398468-1398507:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1398594-1398765:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1399307-1401170:1:exon

LOC104927436
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104927436
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G2/M phase-specific E3 ubiquitin-protein ligase isoform X2
translation: MKKKARRSLVADSGGNKEQCCVLCRLSDDDPAMFGEKVTLKEHKLSVHYFCLLTSCGVYQRGEEGEGVFGFLVDDIKQEIRRSSRLTCCCCKKKGACVGCNVRSCRKTIHFPCGRKQQFISQFTGLFPSFCPDHSPTQSLCVASDLSLPQTCSICLDSIEPILCYSILKCPSCHTSWFHRDCVQRQAHSAGLFFFRCTLCNNKESFQEEMLRMGIYIPERDASWELEANAYSELLEVYQRCDAFTCLCNNGRTHSAKSGWFELIRCRLCGSGGTHRKCSGLELDTNNWACSDCTQATDRRASLVASPQGGQSLLSKRNISPIHSPISCKRPSVSVRSGSSEELLQALASQLRPLSVQVEVSKGAALSAGVALVRRADFDPTHTLSVRFKEKRRTSFPSSLQDSNMAKQYFLKLLVQQIQDSVVFEGPDGSKNLALNSQALREDLYFDVGCLLALALVHGGPPVGFFSRALYQSLFNYPPNQPLTVAYMTPDTPLTRQVNRITKAKSLNELKKVMAANWQYLELAGCNRPINRLEEREALVEDLVSFTLITRVQLPLQRFREGLQTLGVFDQVQLFPSAFYSVFCKVDVRLTARSLGQLFSVNHSQQEDRLKREMPVVTFWRHFLLECEVGRSSISLQDLLRFVTEADEFPAAGFLPSPSISFLHPVISSPPEAEQEEEEEEDEEEGAGRPGREVWSDEGLFPQRDTTSKHLLLPVTSSYQAFKSSMEQVY
SIO_010081: LOC104927436
subclass of: SO_0000673
so part of: LOC104927436
location: join(1393685..1393742,1393960..1394057,1394479..1394580,1394750..1394874,1395195..1395363,1395556..1395662,1395870..1395986,1396198..1396322,1396414..1396501,1396576..1396746,1396842..1396996,1397134..1397318,1397410..1397582,1398468..1398507,1398594..1398765,1399307..1399605,1399814..1399822)
location: region:1393685-1399822:1
so has part: feature:1393685-1393742:1:exon
so has part: feature:1393960-1394057:1:exon
so has part: feature:1394479-1394580:1:exon
so has part: feature:1394750-1394874:1:exon
so has part: feature:1395195-1395363:1:exon
so has part: feature:1395556-1395662:1:exon
so has part: feature:1395870-1395986:1:exon
so has part: feature:1396198-1396322:1:exon
so has part: feature:1396414-1396501:1:exon
so has part: feature:1396576-1396746:1:exon
so has part: feature:1396842-1396996:1:exon
so has part: feature:1397134-1397318:1:exon
so has part: feature:1397410-1397582:1:exon
so has part: feature:1398468-1398507:1:exon
so has part: feature:1398594-1398765:1:exon
so has part: feature:1399307-1399605:1:exon
so has part: feature:1399814-1399822:1:exon

XP_019118747.1
type: Protein
SIO_000068: ncbiprotein

position:1393685:1
position: 1393685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1399822:1
position: 1399822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1393685-1393742:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1393960-1394057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1394479-1394580:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1394750-1394874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1395195-1395363:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1395556-1395662:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1395870-1395986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1396198-1396322:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1396414-1396501:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1396576-1396746:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1396842-1396996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1397134-1397318:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1397410-1397582:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398468-1398507:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398594-1398765:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1399307-1399605:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1399814-1399822:1:exon

LOC104927436
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104927436
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G2/M phase-specific E3 ubiquitin-protein ligase isoform X1
translation: MKKKARRSLVADSGGNKEQCCVLCRLSDDDPAMFGEKVTLKEHKLSVHYFCLLTSCGVYQRGEEGEGVFGFLVDDIKQEIRRSSRLTCCCCKKKGACVGCNVRSCRKTIHFPCGRKQQFISQFTGLFPSFCPDHSPTQSLCVASDLSLPQTCSICLDSIEPILCYSILKCPSCHTSWFHRDCVQRQAHSAGLFFFRCTLCNNKESFQEEMLRMGIYIPERDASWELEANAYSELLEVYQRCDAFTCLCNNGRTHSAKSGWFELIRCRLCGSGGTHRKCSGLELDTNNWACSDCTQATDRRASLVASPQGGQSLLSKRNISPIHSPISCKRPSVSVRSGSSEELLQALASQLRPLSVQVEVSKGAALSAGVALVRRADFDPTHTLSVRFKEKRRTSFPSSLQDSNMAKQYFLKLLVQQIQDSVVFEGPDGSKNLALNSQALREDLYFDVGCLLALALVHGGPPVGFFSRALYQSLFNYPPNQPLTVAYMTPDTPLTRQVNRITKAKSLNELKKVMAANWQYLELAGCNRPINRLEEREALVEDLVSFTLITRVQLPLQRFREGLQTLGVFDQVQLFPSAFYSVFCKVDVRLTARSLGQLFSVNHSQQEDRLKREMPVVTFWRHFLLECEVGRSSISLQDLLRFVTEADEFPAAGFLPSPSISFLHPVISSPPEAEQEEEEEEDEEEGAGRPGREVWSDEGLFPQRDTTSKHLLLPVTSSYQAFKSSMEQVVSHHVHLLPTER
SIO_010081: LOC104927436
subclass of: SO_0000673
so part of: LOC104927436
location: join(1393685..1393742,1393960..1394057,1394479..1394580,1394750..1394874,1395195..1395363,1395556..1395662,1395870..1395986,1396198..1396322,1396414..1396501,1396576..1396746,1396842..1396996,1397134..1397318,1397410..1397582,1398468..1398507,1398594..1398765,1399307..1399647)
location: region:1393685-1399647:1
so has part: feature:1393685-1393742:1:exon
so has part: feature:1393960-1394057:1:exon
so has part: feature:1394479-1394580:1:exon
so has part: feature:1394750-1394874:1:exon
so has part: feature:1395195-1395363:1:exon
so has part: feature:1395556-1395662:1:exon
so has part: feature:1395870-1395986:1:exon
so has part: feature:1396198-1396322:1:exon
so has part: feature:1396414-1396501:1:exon
so has part: feature:1396576-1396746:1:exon
so has part: feature:1396842-1396996:1:exon
so has part: feature:1397134-1397318:1:exon
so has part: feature:1397410-1397582:1:exon
so has part: feature:1398468-1398507:1:exon
so has part: feature:1398594-1398765:1:exon
so has part: feature:1399307-1399647:1:exon

XP_010739816.1
type: Protein
SIO_000068: ncbiprotein

position:1399647:1
position: 1399647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1393685-1393742:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1393960-1394057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1394479-1394580:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1394750-1394874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1395195-1395363:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1395556-1395662:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1395870-1395986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1396198-1396322:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1396414-1396501:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1396576-1396746:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1396842-1396996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1397134-1397318:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1397410-1397582:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398468-1398507:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398594-1398765:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1399307-1399647:1:exon

LOC104927438
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104927438
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1416203..1420501)
location: region:1416203-1420501:-1
so has part: feature:1416203-1420501:-1:exon
subclass of: SO_0000010

104927438
type: Gene
SIO_000068: ncbigene

position:1416203:-1
position: 1416203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420501:-1
position: 1420501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1416203-1420501:-1:exon

LOC104927438
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104927438
product: dehydrogenase/reductase SDR family member 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_019263203.2
SIO_010081: LOC104927438
subclass of: SO_0000673
so part of: LOC104927438
location: complement(join(1416203..1416640,1417910..1418236,1418503..1418626,1418870..1418988,1419812..1419946,1420369..1420501))
location: region:1416203-1420501:-1
so has part: feature:1420369-1420501:-1:exon
so has part: feature:1419812-1419946:-1:exon
so has part: feature:1418870-1418988:-1:exon
so has part: feature:1418503-1418626:-1:exon
so has part: feature:1417910-1418236:-1:exon
so has part: feature:1416203-1416640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1420369-1420501:-1:exon

position:1420369:-1
position: 1420369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1419812-1419946:-1:exon

position:1419812:-1
position: 1419812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419946:-1
position: 1419946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1418870-1418988:-1:exon

position:1418870:-1
position: 1418870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418988:-1
position: 1418988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1418503-1418626:-1:exon

position:1418503:-1
position: 1418503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418626:-1
position: 1418626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1417910-1418236:-1:exon

position:1417910:-1
position: 1417910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418236:-1
position: 1418236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1416203-1416640:-1:exon

position:1416640:-1
position: 1416640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104927438
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104927438
product: dehydrogenase/reductase SDR family member 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_027278759.1
SIO_010081: LOC104927438
subclass of: SO_0000673
so part of: LOC104927438
location: complement(join(1416203..1416640,1417910..1418236,1418503..1418626,1418870..1418988,1419812..1419946,1420122..1420286))
location: region:1416203-1420286:-1
so has part: feature:1420122-1420286:-1:exon
so has part: feature:1419812-1419946:-1:exon
so has part: feature:1418870-1418988:-1:exon
so has part: feature:1418503-1418626:-1:exon
so has part: feature:1417910-1418236:-1:exon
so has part: feature:1416203-1416640:-1:exon

position:1420286:-1
position: 1420286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1420122-1420286:-1:exon

position:1420122:-1
position: 1420122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1419812-1419946:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1418870-1418988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1418503-1418626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417910-1418236:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1416203-1416640:-1:exon

LOC104927438
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104927438
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 11 isoform X1
translation: MKNSQKKISWEVRMILELLLFGLLLLGGYFLLHMTLLKLPRCKSTAKLHGKTAIVTGANTGIGKTTAMDLARRGARVIMACRDRQRAEAAIQEIIQETGNSQVIFMQLDLASLQSVRSFAENFLRSESKLDLLINNAGLMNGGQTVDGFGMIFGVNHLGHFLLTVLLLDQLKASGPSRVVNVASKAYTMGNVDFKCLTTHKDLALGSSDYQLFQKYCHSKLCNVLFTYELAKRLQGTSVTCYSLHPGAIKTDIGRYAGFLWSFFMAPIIFFFFVDAESGAQTTLHCALEPGIEHLSGHYFTQCAPLMKIESKARDDAAAKKLWELSESFCGLS
SIO_010081: LOC104927438
subclass of: SO_0000673
so part of: LOC104927438
location: complement(join(1416378..1416640,1417910..1418236,1418503..1418626,1418870..1418988,1419812..1419946,1420122..1420155))
location: region:1416378-1420155:-1
so has part: feature:1420122-1420155:-1:exon
so has part: feature:1419812-1419946:-1:exon
so has part: feature:1418870-1418988:-1:exon
so has part: feature:1418503-1418626:-1:exon
so has part: feature:1417910-1418236:-1:exon
so has part: feature:1416378-1416640:-1:exon

XP_027134560.1
type: Protein
SIO_000068: ncbiprotein

position:1416378:-1
position: 1416378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420155:-1
position: 1420155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1420122-1420155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1419812-1419946:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1418870-1418988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1418503-1418626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417910-1418236:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1416378-1416640:-1:exon

LOC104927438
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104927438
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrogenase/reductase SDR family member 13 isoform X2
translation: MILELLLFGLLLLGGYFLLHMTLLKLPRCKSTAKLHGKTAIVTGANTGIGKTTAMDLARRGARVIMACRDRQRAEAAIQEIIQETGNSQVIFMQLDLASLQSVRSFAENFLRSESKLDLLINNAGLMNGGQTVDGFGMIFGVNHLGHFLLTVLLLDQLKASGPSRVVNVASKAYTMGNVDFKCLTTHKDLALGSSDYQLFQKYCHSKLCNVLFTYELAKRLQGTSVTCYSLHPGAIKTDIGRYAGFLWSFFMAPIIFFFFVDAESGAQTTLHCALEPGIEHLSGHYFTQCAPLMKIESKARDDAAAKKLWELSESFCGLS
SIO_010081: LOC104927438
subclass of: SO_0000673
so part of: LOC104927438
location: complement(join(1416378..1416640,1417910..1418236,1418503..1418626,1418870..1418988,1419812..1419941))
location: region:1416378-1419941:-1
so has part: feature:1419812-1419941:-1:exon
so has part: feature:1418870-1418988:-1:exon
so has part: feature:1418503-1418626:-1:exon
so has part: feature:1417910-1418236:-1:exon
so has part: feature:1416378-1416640:-1:exon

XP_019118748.2
type: Protein
SIO_000068: ncbiprotein

position:1419941:-1
position: 1419941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1419812-1419941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1418870-1418988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1418503-1418626:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1417910-1418236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1416378-1416640:-1:exon

LOC113745783
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC113745783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1423150..1432315
location: region:1423150-1432315:1
so has part: feature:1423150-1432315:1:exon
subclass of: SO_0000010

113745783
type: Gene
SIO_000068: ncbigene

position:1423150:1
position: 1423150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432315:1
position: 1432315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1423150-1432315:1:exon

LOC113745783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC113745783
product: voltage-dependent T-type calcium channel subunit alpha-1I-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027278754.1
SIO_010081: LOC113745783
subclass of: SO_0000673
so part of: LOC113745783
location: join(1423150..1423283,1426603..1426761,1427317..1427410,1427503..1427639,1427789..1427877,1428771..1428930,1429341..1429662,1430129..1430221,1431223..1431387,1432310..1432315)
location: region:1423150-1432315:1
so has part: feature:1423150-1423283:1:exon
so has part: feature:1426603-1426761:1:exon
so has part: feature:1427317-1427410:1:exon
so has part: feature:1427503-1427639:1:exon
so has part: feature:1427789-1427877:1:exon
so has part: feature:1428771-1428930:1:exon
so has part: feature:1429341-1429662:1:exon
so has part: feature:1430129-1430221:1:exon
so has part: feature:1431223-1431387:1:exon
so has part: feature:1432310-1432315:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1423150-1423283:1:exon

position:1423283:1
position: 1423283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1426603-1426761:1:exon

position:1426603:1
position: 1426603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426761:1
position: 1426761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1427317-1427410:1:exon

position:1427317:1
position: 1427317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427410:1
position: 1427410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1427503-1427639:1:exon

position:1427503:1
position: 1427503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427639:1
position: 1427639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1427789-1427877:1:exon

position:1427789:1
position: 1427789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427877:1
position: 1427877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1428771-1428930:1:exon

position:1428771:1
position: 1428771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428930:1
position: 1428930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1429341-1429662:1:exon

position:1429341:1
position: 1429341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429662:1
position: 1429662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1430129-1430221:1:exon

position:1430129:1
position: 1430129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430221:1
position: 1430221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1431223-1431387:1:exon

position:1431223:1
position: 1431223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431387:1
position: 1431387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1432310-1432315:1:exon

position:1432310:1
position: 1432310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113745783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC113745783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent T-type calcium channel subunit alpha-1I-like
translation: MVHNPNPVPRDDEYLPYPALAPVVFFGIKQTTRPRNWCLKVACSLWLEYVSKLMALLSCAIVCMYKPYEEPSNLLKILEPLTFSFFMVEMLLKMLALGVFGYQGSYLSNNWNKFDVFINTVNAVDYVLAFLGINWQISKSLEPMRLIGRISSMRALMKVLLDMMPMLINVFILYFFIINVFAVVGVQLWAGKLRNRCFLGEDIIGKYNVSMSPFYEPEDSERYPFICSLGKHGMRRCSGVPPSRDNGKLCSVAAPDNASAASHSFRMVGDVSTEECINWHMYYNVCRTGNHNPHRGAVNFDNIGYAWMTIFQVVMLEGWTEIMFYVMDAHSFWSFVILIPVTIMGSFVMMNVCAVVIVNQFTESAQRDTGQRGAGAASIAWLCYMLTSSLRVIYLEEVL
SIO_010081: LOC113745783
subclass of: SO_0000673
so part of: LOC113745783
location: join(1426628..1426761,1427317..1427410,1427503..1427639,1427789..1427877,1428771..1428930,1429341..1429662,1430129..1430221,1431223..1431387,1432310..1432315)
location: region:1426628-1432315:1
so has part: feature:1426628-1426761:1:exon
so has part: feature:1427317-1427410:1:exon
so has part: feature:1427503-1427639:1:exon
so has part: feature:1427789-1427877:1:exon
so has part: feature:1428771-1428930:1:exon
so has part: feature:1429341-1429662:1:exon
so has part: feature:1430129-1430221:1:exon
so has part: feature:1431223-1431387:1:exon
so has part: feature:1432310-1432315:1:exon

XP_027134555.1
type: Protein
SIO_000068: ncbiprotein

position:1426628:1
position: 1426628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1426628-1426761:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427317-1427410:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427503-1427639:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1427789-1427877:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1428771-1428930:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1429341-1429662:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1430129-1430221:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1431223-1431387:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1432310-1432315:1:exon

LOC109142346
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC109142346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1434005..1439907)
location: region:1434005-1439907:-1
so has part: feature:1434005-1439907:-1:exon
subclass of: SO_0000010

109142346
type: Gene
SIO_000068: ncbigene

position:1434005:-1
position: 1434005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439907:-1
position: 1439907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1434005-1439907:-1:exon

LOC109142346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC109142346
product: dehydrogenase/reductase SDR family member 13-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027278735.1
SIO_010081: LOC109142346
subclass of: SO_0000673
so part of: LOC109142346
location: complement(join(1434005..1434291,1437049..1437375,1438701..1438824,1439067..1439185,1439776..1439907))
location: region:1434005-1439907:-1
so has part: feature:1439776-1439907:-1:exon
so has part: feature:1439067-1439185:-1:exon
so has part: feature:1438701-1438824:-1:exon
so has part: feature:1437049-1437375:-1:exon
so has part: feature:1434005-1434291:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1439776-1439907:-1:exon

position:1439776:-1
position: 1439776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1439067-1439185:-1:exon

position:1439067:-1
position: 1439067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439185:-1
position: 1439185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1438701-1438824:-1:exon

position:1438701:-1
position: 1438701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1438824:-1
position: 1438824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1437049-1437375:-1:exon

position:1437049:-1
position: 1437049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437375:-1
position: 1437375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1434005-1434291:-1:exon

position:1434291:-1
position: 1434291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109142346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC109142346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrogenase/reductase SDR family member 13-like
translation: MILELLLFGLLLLGGYFLLHMTLLKLPRCKSTAKLHGKTAIVTGANTGIGKTTAMDLARRGARVIMACRDRQRAEAAIQEIIQETSNSQVIFMQLDLASLQSVRSFADNFLRSESRLDLLINNAGLVNGGQTVDGFGMIFGVNHLGHFLLTVLLLDQLKASGPSRVVNVASKVYTMGNVDFKCLTTHRDLALGSSDYQLFQKYCHSKLCNVLFTYELAKRLQGTNITCYSLHPGVIKTDICRYTGFLSSFFMAPIIFFFFVDAESGAQTTLHCALEPGIEHLSGHYFTQCAPLMKIESKARDDDAAKKLWELSESFCGLS
SIO_010081: LOC109142346
subclass of: SO_0000673
so part of: LOC109142346
location: complement(join(1434029..1434291,1437049..1437375,1438701..1438824,1439067..1439185,1439776..1439905))
location: region:1434029-1439905:-1
so has part: feature:1439776-1439905:-1:exon
so has part: feature:1439067-1439185:-1:exon
so has part: feature:1438701-1438824:-1:exon
so has part: feature:1437049-1437375:-1:exon
so has part: feature:1434029-1434291:-1:exon

XP_027134536.1
type: Protein
SIO_000068: ncbiprotein

position:1434029:-1
position: 1434029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439905:-1
position: 1439905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1439776-1439905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1439067-1439185:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438701-1438824:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1437049-1437375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1434029-1434291:-1:exon

rrh
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: rrh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1445881..1453702
location: region:1445881-1453702:1
so has part: feature:1445881-1453702:1:exon
subclass of: SO_0000010

104940283
type: Gene
SIO_000068: ncbigene

position:1445881:1
position: 1445881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453702:1
position: 1453702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1445881-1453702:1:exon

rrh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: rrh
product: retinal pigment epithelium-derived rhodopsin homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010756851.3
SIO_010081: rrh
subclass of: SO_0000673
so part of: rrh
location: join(1445881..1445978,1446167..1446278,1447766..1447956,1449947..1450046,1451849..1452002,1452647..1452815,1453152..1453330,1453459..1453702)
location: region:1445881-1453702:1
so has part: feature:1445881-1445978:1:exon
so has part: feature:1446167-1446278:1:exon
so has part: feature:1447766-1447956:1:exon
so has part: feature:1449947-1450046:1:exon
so has part: feature:1451849-1452002:1:exon
so has part: feature:1452647-1452815:1:exon
so has part: feature:1453152-1453330:1:exon
so has part: feature:1453459-1453702:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1445881-1445978:1:exon

position:1445978:1
position: 1445978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1446167-1446278:1:exon

position:1446167:1
position: 1446167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446278:1
position: 1446278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1447766-1447956:1:exon

position:1447766:1
position: 1447766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447956:1
position: 1447956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1449947-1450046:1:exon

position:1449947:1
position: 1449947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1450046:1
position: 1450046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1451849-1452002:1:exon

position:1451849:1
position: 1451849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452002:1
position: 1452002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1452647-1452815:1:exon

position:1452647:1
position: 1452647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452815:1
position: 1452815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1453152-1453330:1:exon

position:1453152:1
position: 1453152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453330:1
position: 1453330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1453459-1453702:1:exon

position:1453459:1
position: 1453459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rrh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: rrh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: visual pigment-like receptor peropsin
translation: MGIVSQVNISDGVEPYGGSAFTQAEHNIVAAYLITAGVISLMSNIVVLLMFVKFKELRTATNFIIINLAFTDIGVAGIGYPMSAASDLHGSWKFGYTGCQIYAALNIFFGMASIGLLTVVAIDRYLTICRPDIGQKMTMRSYNLLILAAWLNAVFWSSMPIVGWAGYAPDPTGATCTINWRQNDASFISYTMAVIAVNFMMPLIVMFYCYYNVSATVKRYKTSNCLDSINIDWSDQMDVTKMSIVMIVMFLVAWSPYSVVCLWASFGDPKTIPAPMAIIAPLFAKSSTFYNPCIYVIANKKFRRAIIGMIRCQTRQRITINTQVPMTTSQQPLT
SIO_010081: rrh
subclass of: SO_0000673
so part of: rrh
location: join(1446170..1446278,1447766..1447956,1449947..1450046,1451849..1452002,1452647..1452815,1453152..1453330,1453459..1453561)
location: region:1446170-1453561:1
so has part: feature:1446170-1446278:1:exon
so has part: feature:1447766-1447956:1:exon
so has part: feature:1449947-1450046:1:exon
so has part: feature:1451849-1452002:1:exon
so has part: feature:1452647-1452815:1:exon
so has part: feature:1453152-1453330:1:exon
so has part: feature:1453459-1453561:1:exon

XP_010755153.2
type: Protein
SIO_000068: ncbiprotein

position:1446170:1
position: 1446170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453561:1
position: 1453561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1446170-1446278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1447766-1447956:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1449947-1450046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1451849-1452002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1452647-1452815:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1453152-1453330:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1453459-1453561:1:exon

enpep
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: enpep
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1454139..1499712)
location: region:1454139-1499712:-1
so has part: feature:1454139-1499712:-1:exon
subclass of: SO_0000010

104937780
type: Gene
SIO_000068: ncbigene

position:1454139:-1
position: 1454139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499712:-1
position: 1499712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1454139-1499712:-1:exon

enpep
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: enpep
product: glutamyl aminopeptidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019275862.2
SIO_010081: enpep
subclass of: SO_0000673
so part of: enpep
location: complement(join(1454139..1455898,1456623..1456704,1458867..1459007,1461739..1461912,1462262..1462366,1462555..1462628,1464895..1465051,1465142..1465197,1465875..1466011,1466367..1466449,1482490..1482650,1486804..1486869,1486972..1487037,1487128..1487262,1487357..1487470,1490734..1490888,1491800..1491920,1492051..1492182,1492734..1492875,1494925..1495685,1499664..1499712))
location: region:1454139-1499712:-1
so has part: feature:1499664-1499712:-1:exon
so has part: feature:1494925-1495685:-1:exon
so has part: feature:1492734-1492875:-1:exon
so has part: feature:1492051-1492182:-1:exon
so has part: feature:1491800-1491920:-1:exon
so has part: feature:1490734-1490888:-1:exon
so has part: feature:1487357-1487470:-1:exon
so has part: feature:1487128-1487262:-1:exon
so has part: feature:1486972-1487037:-1:exon
so has part: feature:1486804-1486869:-1:exon
so has part: feature:1482490-1482650:-1:exon
so has part: feature:1466367-1466449:-1:exon
so has part: feature:1465875-1466011:-1:exon
so has part: feature:1465142-1465197:-1:exon
so has part: feature:1464895-1465051:-1:exon
so has part: feature:1462555-1462628:-1:exon
so has part: feature:1462262-1462366:-1:exon
so has part: feature:1461739-1461912:-1:exon
so has part: feature:1458867-1459007:-1:exon
so has part: feature:1456623-1456704:-1:exon
so has part: feature:1454139-1455898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1499664-1499712:-1:exon

position:1499664:-1
position: 1499664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1494925-1495685:-1:exon

position:1494925:-1
position: 1494925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495685:-1
position: 1495685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1492734-1492875:-1:exon

position:1492734:-1
position: 1492734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1492875:-1
position: 1492875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1492051-1492182:-1:exon

position:1492051:-1
position: 1492051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1492182:-1
position: 1492182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1491800-1491920:-1:exon

position:1491800:-1
position: 1491800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1491920:-1
position: 1491920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1490734-1490888:-1:exon

position:1490734:-1
position: 1490734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1490888:-1
position: 1490888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1487357-1487470:-1:exon

position:1487357:-1
position: 1487357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1487470:-1
position: 1487470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1487128-1487262:-1:exon

position:1487128:-1
position: 1487128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1487262:-1
position: 1487262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1486972-1487037:-1:exon

position:1486972:-1
position: 1486972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1487037:-1
position: 1487037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1486804-1486869:-1:exon

position:1486804:-1
position: 1486804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1486869:-1
position: 1486869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1482490-1482650:-1:exon

position:1482490:-1
position: 1482490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1482650:-1
position: 1482650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1466367-1466449:-1:exon

position:1466367:-1
position: 1466367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1466449:-1
position: 1466449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1465875-1466011:-1:exon

position:1465875:-1
position: 1465875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1466011:-1
position: 1466011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1465142-1465197:-1:exon

position:1465142:-1
position: 1465142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1465197:-1
position: 1465197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1464895-1465051:-1:exon

position:1464895:-1
position: 1464895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1465051:-1
position: 1465051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1462555-1462628:-1:exon

position:1462555:-1
position: 1462555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1462628:-1
position: 1462628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1462262-1462366:-1:exon

position:1462262:-1
position: 1462262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1462366:-1
position: 1462366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1461739-1461912:-1:exon

position:1461739:-1
position: 1461739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1461912:-1
position: 1461912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1458867-1459007:-1:exon

position:1458867:-1
position: 1458867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1459007:-1
position: 1459007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1456623-1456704:-1:exon

position:1456623:-1
position: 1456623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1456704:-1
position: 1456704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1454139-1455898:-1:exon

position:1455898:-1
position: 1455898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

enpep
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: enpep
product: glutamyl aminopeptidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027278684.1
SIO_010081: enpep
subclass of: SO_0000673
so part of: enpep
location: complement(join(1454139..1455898,1456623..1456704,1458867..1459007,1461739..1461912,1462262..1462366,1462555..1462628,1464895..1465051,1465142..1465197,1465875..1466011,1466367..1466449,1482490..1482650,1486804..1486869,1486972..1487037,1487128..1487262,1487357..1487470,1490734..1490888,1491800..1491920,1492111..1492182,1492734..1492875,1494925..1495731))
location: region:1454139-1495731:-1
so has part: feature:1494925-1495731:-1:exon
so has part: feature:1492734-1492875:-1:exon
so has part: feature:1492111-1492182:-1:exon
so has part: feature:1491800-1491920:-1:exon
so has part: feature:1490734-1490888:-1:exon
so has part: feature:1487357-1487470:-1:exon
so has part: feature:1487128-1487262:-1:exon
so has part: feature:1486972-1487037:-1:exon
so has part: feature:1486804-1486869:-1:exon
so has part: feature:1482490-1482650:-1:exon
so has part: feature:1466367-1466449:-1:exon
so has part: feature:1465875-1466011:-1:exon
so has part: feature:1465142-1465197:-1:exon
so has part: feature:1464895-1465051:-1:exon
so has part: feature:1462555-1462628:-1:exon
so has part: feature:1462262-1462366:-1:exon
so has part: feature:1461739-1461912:-1:exon
so has part: feature:1458867-1459007:-1:exon
so has part: feature:1456623-1456704:-1:exon
so has part: feature:1454139-1455898:-1:exon

position:1495731:-1
position: 1495731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1494925-1495731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1492734-1492875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1492111-1492182:-1:exon

position:1492111:-1
position: 1492111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1491800-1491920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1490734-1490888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1487357-1487470:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1487128-1487262:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1486972-1487037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1486804-1486869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1482490-1482650:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1466367-1466449:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1465875-1466011:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1465142-1465197:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1464895-1465051:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1462555-1462628:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1462262-1462366:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1461739-1461912:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1458867-1459007:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1456623-1456704:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1454139-1455898:-1:exon

enpep
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: enpep
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamyl aminopeptidase isoform X2
translation: MVDSMEMEKEQKRYCIRTKHVVIICVTVLVCSLALGVGLGVGLSSSDTTTSTTPKPTPPPTEEPPPPGRGPCLPSTDSSGEWNNFRLPNYVNPIHYNLHLEPDLVDDTYSGTVDIHVKVNKPTRYLWLHIRETFVSTMPRLKMLNSQKEVAVKSCFEYKPQQYVVVEATEELPVTSPEEMYVLSLDFQGWLNGSVVGFYRVIYTENGVTKKIAATDHEPTDARKSFPCFDEPNKKATYNVSITHDANYGALSNMPQENQENLPGNKKKTTFVKSIPMSTYLLRIYAQPSQLDTAEYAANTTKMIFDYFEEYFNMTYSISKLDKIAIPDFGTGAMENWGLITYRETNLLYDENQSSSYNKQRVASVIAHELVHQWFGNIVTMDWWDDLWLNEGFASFFEYIGVEKAEPSWGMRDIMIISDVLPVMVDDALLSSHPIIVDVSTPAEITSVFDTISYSKGASILRMLEDWMGKDMFRDGCRQYLKDYYFMNAKTANFWESLASVSGLPVAEVMDTWTKQMGYPVLHLTVSEMDAKLNQKRFLLDPEANATQPPSPFGYKWTIPVKWHAVKSDKSHFVMFNKSSTEQIITDYSPSVDGLLKVNNDHIGFYRVNHDNNMWNTISEQLQKNHSEFDAADRTSYIDDVFTLARANIIDYGNAFNLIKYLANETDYIVWDHVATSIAYVRDMLSNNENKEVYTLFQKLFRNHVQAIARQLGWNDVGTQTERLLRETVLSIACRMGSEEDLNEASQKFDQWIDGSLSSVPVNLRLLVYQYGIKNSSSEAEWNIMFQRYKNTTLAQEKDKLLYGLASVDSVALLFKLLEATKDESVIRSQDLFTVVRYVSYNPLGQNMAWDWTTLNWDYLVNRYTINDRNLGRLLNRITTNYNTELQLWKMEHFFNKTLDAGAGQMPRQQALETVRNNIEWIKNNGNEISAWLKSNVN
SIO_010081: enpep
subclass of: SO_0000673
so part of: enpep
location: complement(join(1455752..1455898,1456623..1456704,1458867..1459007,1461739..1461912,1462262..1462366,1462555..1462628,1464895..1465051,1465142..1465197,1465875..1466011,1466367..1466449,1482490..1482650,1486804..1486869,1486972..1487037,1487128..1487262,1487357..1487470,1490734..1490888,1491800..1491920,1492111..1492182,1492734..1492875,1494925..1495553))
location: region:1455752-1495553:-1
so has part: feature:1494925-1495553:-1:exon
so has part: feature:1492734-1492875:-1:exon
so has part: feature:1492111-1492182:-1:exon
so has part: feature:1491800-1491920:-1:exon
so has part: feature:1490734-1490888:-1:exon
so has part: feature:1487357-1487470:-1:exon
so has part: feature:1487128-1487262:-1:exon
so has part: feature:1486972-1487037:-1:exon
so has part: feature:1486804-1486869:-1:exon
so has part: feature:1482490-1482650:-1:exon
so has part: feature:1466367-1466449:-1:exon
so has part: feature:1465875-1466011:-1:exon
so has part: feature:1465142-1465197:-1:exon
so has part: feature:1464895-1465051:-1:exon
so has part: feature:1462555-1462628:-1:exon
so has part: feature:1462262-1462366:-1:exon
so has part: feature:1461739-1461912:-1:exon
so has part: feature:1458867-1459007:-1:exon
so has part: feature:1456623-1456704:-1:exon
so has part: feature:1455752-1455898:-1:exon

XP_027134485.1
type: Protein
SIO_000068: ncbiprotein

position:1455752:-1
position: 1455752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495553:-1
position: 1495553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1494925-1495553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1492734-1492875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1492111-1492182:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1491800-1491920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1490734-1490888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1487357-1487470:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1487128-1487262:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1486972-1487037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1486804-1486869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1482490-1482650:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1466367-1466449:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1465875-1466011:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1465142-1465197:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1464895-1465051:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1462555-1462628:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1462262-1462366:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1461739-1461912:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1458867-1459007:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1456623-1456704:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1455752-1455898:-1:exon

enpep
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: enpep
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamyl aminopeptidase isoform X1
translation: MVDSMEMEKEQKRYCIRTKHVVIICVTVLVCSLALGVGLGVGLSSSDTTTSTTPKPTPPPTEEPPPPGRGPCLPSTDSSGEWNNFRLPNYVNPIHYNLHLEPDLVDDTYSGTVDIHVKVNKPTRYLWLHIRETFVSTMPRLKMLNSQKEVAVKSCFEYKPQQYVVVEATEELPVTSPEEMYVLSLDFQGWLNGSVVGFYRVIYTENGVTKKIAATDHEPTDARKSFPCFDEPNKKATYNVSITHDANYGALSNMPQENQENLPGNKKKTTFVKSIPMSTYLVCFAVHKFEYLERTSASGIPLRIYAQPSQLDTAEYAANTTKMIFDYFEEYFNMTYSISKLDKIAIPDFGTGAMENWGLITYRETNLLYDENQSSSYNKQRVASVIAHELVHQWFGNIVTMDWWDDLWLNEGFASFFEYIGVEKAEPSWGMRDIMIISDVLPVMVDDALLSSHPIIVDVSTPAEITSVFDTISYSKGASILRMLEDWMGKDMFRDGCRQYLKDYYFMNAKTANFWESLASVSGLPVAEVMDTWTKQMGYPVLHLTVSEMDAKLNQKRFLLDPEANATQPPSPFGYKWTIPVKWHAVKSDKSHFVMFNKSSTEQIITDYSPSVDGLLKVNNDHIGFYRVNHDNNMWNTISEQLQKNHSEFDAADRTSYIDDVFTLARANIIDYGNAFNLIKYLANETDYIVWDHVATSIAYVRDMLSNNENKEVYTLFQKLFRNHVQAIARQLGWNDVGTQTERLLRETVLSIACRMGSEEDLNEASQKFDQWIDGSLSSVPVNLRLLVYQYGIKNSSSEAEWNIMFQRYKNTTLAQEKDKLLYGLASVDSVALLFKLLEATKDESVIRSQDLFTVVRYVSYNPLGQNMAWDWTTLNWDYLVNRYTINDRNLGRLLNRITTNYNTELQLWKMEHFFNKTLDAGAGQMPRQQALETVRNNIEWIKNNGNEISAWLKSNVN
SIO_010081: enpep
subclass of: SO_0000673
so part of: enpep
location: complement(join(1455752..1455898,1456623..1456704,1458867..1459007,1461739..1461912,1462262..1462366,1462555..1462628,1464895..1465051,1465142..1465197,1465875..1466011,1466367..1466449,1482490..1482650,1486804..1486869,1486972..1487037,1487128..1487262,1487357..1487470,1490734..1490888,1491800..1491920,1492051..1492182,1492734..1492875,1494925..1495553))
location: region:1455752-1495553:-1
so has part: feature:1494925-1495553:-1:exon
so has part: feature:1492734-1492875:-1:exon
so has part: feature:1492051-1492182:-1:exon
so has part: feature:1491800-1491920:-1:exon
so has part: feature:1490734-1490888:-1:exon
so has part: feature:1487357-1487470:-1:exon
so has part: feature:1487128-1487262:-1:exon
so has part: feature:1486972-1487037:-1:exon
so has part: feature:1486804-1486869:-1:exon
so has part: feature:1482490-1482650:-1:exon
so has part: feature:1466367-1466449:-1:exon
so has part: feature:1465875-1466011:-1:exon
so has part: feature:1465142-1465197:-1:exon
so has part: feature:1464895-1465051:-1:exon
so has part: feature:1462555-1462628:-1:exon
so has part: feature:1462262-1462366:-1:exon
so has part: feature:1461739-1461912:-1:exon
so has part: feature:1458867-1459007:-1:exon
so has part: feature:1456623-1456704:-1:exon
so has part: feature:1455752-1455898:-1:exon

XP_019131407.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1494925-1495553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1492734-1492875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1492051-1492182:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1491800-1491920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1490734-1490888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1487357-1487470:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1487128-1487262:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1486972-1487037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1486804-1486869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1482490-1482650:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1466367-1466449:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1465875-1466011:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1465142-1465197:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1464895-1465051:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1462555-1462628:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1462262-1462366:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1461739-1461912:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1458867-1459007:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1456623-1456704:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1455752-1455898:-1:exon

LOC104937779
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104937779
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1518071..1522565)
location: region:1518071-1522565:-1
so has part: feature:1518071-1522565:-1:exon
subclass of: SO_0000010

104937779
type: Gene
SIO_000068: ncbigene

position:1518071:-1
position: 1518071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1522565:-1
position: 1522565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1518071-1522565:-1:exon

LOC104937779
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104937779
product: leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027278699.1
SIO_010081: LOC104937779
subclass of: SO_0000673
so part of: LOC104937779
location: complement(join(1518071..1518577,1519157..1519216,1519306..1519599,1520844..1520929,1521017..1521391,1522430..1522565))
location: region:1518071-1522565:-1
so has part: feature:1522430-1522565:-1:exon
so has part: feature:1521017-1521391:-1:exon
so has part: feature:1520844-1520929:-1:exon
so has part: feature:1519306-1519599:-1:exon
so has part: feature:1519157-1519216:-1:exon
so has part: feature:1518071-1518577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1522430-1522565:-1:exon

position:1522430:-1
position: 1522430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1521017-1521391:-1:exon

position:1521017:-1
position: 1521017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1521391:-1
position: 1521391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1520844-1520929:-1:exon

position:1520844:-1
position: 1520844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1520929:-1
position: 1520929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1519306-1519599:-1:exon

position:1519306:-1
position: 1519306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1519599:-1
position: 1519599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1519157-1519216:-1:exon

position:1519157:-1
position: 1519157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1519216:-1
position: 1519216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1518071-1518577:-1:exon

position:1518577:-1
position: 1518577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104937779
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104937779
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3
translation: MYVLVLVQILQSTLLAVHSCPDLCTCTDGSSGSELRSVQCSDPGISAVPINVPADTVKLRLEKTLISRVPRAAFYNLSELRFLWMTYNSITSIHPSSFVNLKALRELRLDGNFLTSFPWDRLRDMPRLQTLGLHNNRLSSLPAHASLFLTNITYLDLSSNRLTILPAELLDLWFPLPKQQGGPAQRRILGLHDNPWLCDCQISMVMSLSMSLGTPVVLMDQLLTCSRSLGQSGILLTQDDLSRCMRPSVQPAATRVISPLGSDVILRCNATGYPTPTLTWIKTSGYTGCCQQDILETYDQLPRSLESFMQESPRVGVRWSIISLNGLSYKDAGEYRCQARNMAGISEAPIKLKVVGVSQLSRLPKRKLQKTPKPSLKYRKSNQTRTTITTPSVKENQILQNITSPSINKTQTSPNLESQVFPVHKRRKTNSTNAKKKTRTSIKFASES
SIO_010081: LOC104937779
subclass of: SO_0000673
so part of: LOC104937779
location: complement(join(1518153..1518577,1519157..1519216,1519306..1519599,1520844..1520929,1521017..1521391,1522430..1522536))
location: region:1518153-1522536:-1
so has part: feature:1522430-1522536:-1:exon
so has part: feature:1521017-1521391:-1:exon
so has part: feature:1520844-1520929:-1:exon
so has part: feature:1519306-1519599:-1:exon
so has part: feature:1519157-1519216:-1:exon
so has part: feature:1518153-1518577:-1:exon

XP_027134500.1
type: Protein
SIO_000068: ncbiprotein

position:1518153:-1
position: 1518153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1522536:-1
position: 1522536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1522430-1522536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1521017-1521391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1520844-1520929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1519306-1519599:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1519157-1519216:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1518153-1518577:-1:exon

fam241a
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: fam241a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1525898..1533674
location: region:1525898-1533674:1
so has part: feature:1525898-1533674:1:exon
subclass of: SO_0000010

104937778
type: Gene
SIO_000068: ncbigene

position:1525898:1
position: 1525898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1533674:1
position: 1533674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1525898-1533674:1:exon

fam241a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: fam241a
product: family with sequence similarity 241 member A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_019279607.2
SIO_010081: fam241a
subclass of: SO_0000673
so part of: fam241a
location: join(1525898..1526168,1528930..1529230,1531534..1533674)
location: region:1525898-1533674:1
so has part: feature:1525898-1526168:1:exon
so has part: feature:1528930-1529230:1:exon
so has part: feature:1531534-1533674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1525898-1526168:1:exon

position:1526168:1
position: 1526168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1528930-1529230:1:exon

position:1528930:1
position: 1528930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529230:1
position: 1529230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1531534-1533674:1:exon

position:1531534:1
position: 1531534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fam241a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: fam241a
product: family with sequence similarity 241 member A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_010754086.3
SIO_010081: fam241a
subclass of: SO_0000673
so part of: fam241a
location: join(1525899..1526168,1528930..1530943)
location: region:1525899-1530943:1
so has part: feature:1525899-1526168:1:exon
so has part: feature:1528930-1530943:1:exon

position:1525899:1
position: 1525899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1530943:1
position: 1530943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1525899-1526168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1528930-1530943:1:exon

fam241a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: fam241a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein FAM241A
translation: MSAATPPFSDPCVLRRREFEQLPSEDRRGGGHAPQPGPGAGRTAPHQQRHRVDGSQTPARPPTDPLAGWPHLDDPTTREPLLDDCERMGTLFGMLNKCLRRVGFSQMYFGDKIVEPVVIVFFWLLLWFLGIQALGLVGTLCIIIIYIQK
SIO_010081: fam241a
subclass of: SO_0000673
so part of: fam241a
location: join(1526016..1526168,1528930..1529226)
location: region:1526016-1529226:1
so has part: feature:1526016-1526168:1:exon
so has part: feature:1528930-1529226:1:exon

XP_019135152.1
type: Protein
SIO_000068: ncbiprotein

position:1526016:1
position: 1526016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529226:1
position: 1529226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1526016-1526168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1528930-1529226:1:exon

fam241a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: fam241a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein FAM241A
translation: MSAATPPFSDPCVLRRREFEQLPSEDRRGGGHAPQPGPGAGRTAPHQQRHRVDGSQTPARPPTDPLAGWPHLDDPTTREPLLDDCERMGTLFGMLNKCLRRVGFSQMYFGDKIVEPVVIVFFWLLLWFLGIQALGLVGTLCIIIIYIQK
SIO_010081: fam241a
subclass of: SO_0000673
so part of: fam241a
location: join(1526016..1526168,1528930..1529226)
location: region:1526016-1529226:1
so has part: feature:1526016-1526168:1:exon
so has part: feature:1528930-1529226:1:exon

XP_010752388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1526016-1526168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1528930-1529226:1:exon

jkamp
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: jkamp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1533799..1540238)
location: region:1533799-1540238:-1
so has part: feature:1533799-1540238:-1:exon
subclass of: SO_0000010

104937777
type: Gene
SIO_000068: ncbigene

position:1533799:-1
position: 1533799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1540238:-1
position: 1540238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1533799-1540238:-1:exon

jkamp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: jkamp
product: JNK1/MAPK8 associated membrane protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_010754083.3
SIO_010081: jkamp
subclass of: SO_0000673
so part of: jkamp
location: complement(join(1533799..1535906,1536842..1536918,1537006..1537187,1537632..1537838,1537945..1538099,1539354..1539430,1540122..1540238))
location: region:1533799-1540238:-1
so has part: feature:1540122-1540238:-1:exon
so has part: feature:1539354-1539430:-1:exon
so has part: feature:1537945-1538099:-1:exon
so has part: feature:1537632-1537838:-1:exon
so has part: feature:1537006-1537187:-1:exon
so has part: feature:1536842-1536918:-1:exon
so has part: feature:1533799-1535906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1540122-1540238:-1:exon

position:1540122:-1
position: 1540122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1539354-1539430:-1:exon

position:1539354:-1
position: 1539354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1539430:-1
position: 1539430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1537945-1538099:-1:exon

position:1537945:-1
position: 1537945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1538099:-1
position: 1538099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1537632-1537838:-1:exon

position:1537632:-1
position: 1537632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1537838:-1
position: 1537838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1537006-1537187:-1:exon

position:1537006:-1
position: 1537006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1537187:-1
position: 1537187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1536842-1536918:-1:exon

position:1536842:-1
position: 1536842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1536918:-1
position: 1536918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1533799-1535906:-1:exon

position:1535906:-1
position: 1535906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

jkamp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: jkamp
product: JNK1/MAPK8 associated membrane protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010754084.3
SIO_010081: jkamp
subclass of: SO_0000673
so part of: jkamp
location: complement(join(1533799..1535906,1536842..1536918,1537006..1537187,1537632..1537838,1537945..1538099,1538254..1538515))
location: region:1533799-1538515:-1
so has part: feature:1538254-1538515:-1:exon
so has part: feature:1537945-1538099:-1:exon
so has part: feature:1537632-1537838:-1:exon
so has part: feature:1537006-1537187:-1:exon
so has part: feature:1536842-1536918:-1:exon
so has part: feature:1533799-1535906:-1:exon

position:1538515:-1
position: 1538515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1538254-1538515:-1:exon

position:1538254:-1
position: 1538254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1537945-1538099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1537632-1537838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1537006-1537187:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1536842-1536918:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1533799-1535906:-1:exon

jkamp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: jkamp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: JNK1/MAPK8-associated membrane protein isoform X1
translation: MAVAISTCPGLYCGRMMVNGSVEGDCGVCPRGERTNLHKVCERCTESPELYDWLYLGFMAMLPLVLHWFFIEWYSGKKSSSALLQHITAMLECSVSAVVTLLVTEPVGLLSIRSCRVQMLSDWYTMLYNPSPDYINTLHCTQEAVYPLYTIVLIYYAFCLVLMMLLRPLLVKKIACGLGKSDRFKSIYAALYFFPILTVLQAVGGGLLYYAFPYIILVLSLVTLAVYMSASEIQSFKNLVAKKKRLVVLFSHWLLHAYGIISISRLDKLEQDLPLLALVPGPALFYIATAKFTEPSRILSEGGNGH
SIO_010081: jkamp
subclass of: SO_0000673
so part of: jkamp
location: complement(join(1535688..1535906,1536842..1536918,1537006..1537187,1537632..1537838,1537945..1538099,1539354..1539430,1540122..1540125))
location: region:1535688-1540125:-1
so has part: feature:1540122-1540125:-1:exon
so has part: feature:1539354-1539430:-1:exon
so has part: feature:1537945-1538099:-1:exon
so has part: feature:1537632-1537838:-1:exon
so has part: feature:1537006-1537187:-1:exon
so has part: feature:1536842-1536918:-1:exon
so has part: feature:1535688-1535906:-1:exon

XP_010752385.1
type: Protein
SIO_000068: ncbiprotein

position:1535688:-1
position: 1535688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1540125:-1
position: 1540125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1540122-1540125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539354-1539430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1537945-1538099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1537632-1537838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1537006-1537187:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1536842-1536918:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1535688-1535906:-1:exon

jkamp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: jkamp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: JNK1/MAPK8-associated membrane protein isoform X2
translation: MAMLPLVLHWFFIEWYSGKKSSSALLQHITAMLECSVSAVVTLLVTEPVGLLSIRSCRVQMLSDWYTMLYNPSPDYINTLHCTQEAVYPLYTIVLIYYAFCLVLMMLLRPLLVKKIACGLGKSDRFKSIYAALYFFPILTVLQAVGGGLLYYAFPYIILVLSLVTLAVYMSASEIQSFKNLVAKKKRLVVLFSHWLLHAYGIISISRLDKLEQDLPLLALVPGPALFYIATAKFTEPSRILSEGGNGH
SIO_010081: jkamp
subclass of: SO_0000673
so part of: jkamp
location: complement(join(1535688..1535906,1536842..1536918,1537006..1537187,1537632..1537838,1537945..1538006))
location: region:1535688-1538006:-1
so has part: feature:1537945-1538006:-1:exon
so has part: feature:1537632-1537838:-1:exon
so has part: feature:1537006-1537187:-1:exon
so has part: feature:1536842-1536918:-1:exon
so has part: feature:1535688-1535906:-1:exon

XP_010752386.1
type: Protein
SIO_000068: ncbiprotein

position:1538006:-1
position: 1538006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1537945-1538006:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1537632-1537838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1537006-1537187:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1536842-1536918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1535688-1535906:-1:exon

LOC113745768
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC113745768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1545664..1547168
location: region:1545664-1547168:1
so has part: feature:1545664-1547168:1:exon
subclass of: SO_0000011

113745768
type: Gene
SIO_000068: ncbigene

position:1545664:1
position: 1545664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1547168:1
position: 1547168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1545664-1547168:1:exon

LOC113745768
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 215358
nc RNA class: lncRNA
gene: LOC113745768
product: uncharacterized LOC113745768
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003462384.1
SIO_010081: LOC113745768
subclass of: SO_0000673
so part of: LOC113745768
location: join(1545664..1545771,1545889..1545994,1546755..1546861,1546956..1547168)
location: region:1545664-1547168:1
so has part: feature:1545664-1545771:1:exon
so has part: feature:1545889-1545994:1:exon
so has part: feature:1546755-1546861:1:exon
so has part: feature:1546956-1547168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1545664-1545771:1:exon

position:1545771:1
position: 1545771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1545889-1545994:1:exon

position:1545889:1
position: 1545889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1545994:1
position: 1545994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1546755-1546861:1:exon

position:1546755:1
position: 1546755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1546861:1
position: 1546861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1546956-1547168:1:exon

position:1546956:1
position: 1546956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gpr135
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: gpr135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1560880..1569902
location: region:1560880-1569902:1
so has part: feature:1560880-1569902:1:exon
subclass of: SO_0000010

104928169
type: Gene
SIO_000068: ncbigene

position:1560880:1
position: 1560880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1569902:1
position: 1569902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560880-1569902:1:exon

gpr135
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: gpr135
product: G protein-coupled receptor 135, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_027278745.1
SIO_010081: gpr135
subclass of: SO_0000673
so part of: gpr135
location: join(1560880..1562414,1562676..1562768,1567437..1569902)
location: region:1560880-1569902:1
so has part: feature:1560880-1562414:1:exon
so has part: feature:1562676-1562768:1:exon
so has part: feature:1567437-1569902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1560880-1562414:1:exon

position:1562414:1
position: 1562414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1562676-1562768:1:exon

position:1562676:1
position: 1562676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1562768:1
position: 1562768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1567437-1569902:1:exon

position:1567437:1
position: 1567437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gpr135
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: gpr135
product: G protein-coupled receptor 135, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_027278746.1
SIO_010081: gpr135
subclass of: SO_0000673
so part of: gpr135
location: join(1560880..1562414,1567437..1569902)
location: region:1560880-1569902:1
so has part: feature:1560880-1562414:1:exon
so has part: feature:1567437-1569902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1560880-1562414:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1567437-1569902:1:exon

gpr135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: gpr135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 135 isoform X1
translation: MCVRRGMSFVFLFCASSMDSSVSTALRGSSVGNYTADTSGPSFADQLGTTSSVVPRSPGTTESIKIPGHQCGYPEKNGQHMRDVTHRVVSIVTSLVTTTTEATVGTTGNLSVFRDQRESKLGQIHQASTPSVLSAAESNSVLQGITVAAQALVLLSIFLLSSLGNSAVVIVIIKHRQLRTVTNAFIMSLSLSDFLTAVLCLPFSFIMLFSKDGIWMFGDRFCVANGFFNTCFGIISTLTMTLISFDRYYAIVRQPQAKIGRQKATKLLIAVWLTAVIFSLPWYLLVRTPTEIHKQGFYHCMYVFHSGTSRMGTAYSICLILVCYLLPFSLMCFCHYNICKTVRLSEIRVRPVTTYAYLLRFYSEMRTATTVLIMIVFIIFCWGPYCLMGLVTAMGDYTFNPAMDTVAIWLAWANGAINPLIYALRNPNISMLLGRSREEGYRTRNIAAYLSSQTHNREVQLNQAERIRDRYVSRVGVNNNSRLSSSSPGKGGGGGEVAMWACKNPAVFFCRDAQPDTATVPNSVSAPKMKTADTSL
SIO_010081: gpr135
subclass of: SO_0000673
so part of: gpr135
location: join(1562248..1562414,1562676..1562768,1567437..1568787)
location: region:1562248-1568787:1
so has part: feature:1562248-1562414:1:exon
so has part: feature:1562676-1562768:1:exon
so has part: feature:1567437-1568787:1:exon

XP_027134546.1
type: Protein
SIO_000068: ncbiprotein

position:1562248:1
position: 1562248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1568787:1
position: 1568787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1562248-1562414:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1562676-1562768:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1567437-1568787:1:exon

gpr135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: gpr135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 135 isoform X2
translation: MCVRRGMSFVFLFCASSMDSSVSTALRGSSVGNYTADTSGPSFADQLGTTSSVVPRVVSIVTSLVTTTTEATVGTTGNLSVFRDQRESKLGQIHQASTPSVLSAAESNSVLQGITVAAQALVLLSIFLLSSLGNSAVVIVIIKHRQLRTVTNAFIMSLSLSDFLTAVLCLPFSFIMLFSKDGIWMFGDRFCVANGFFNTCFGIISTLTMTLISFDRYYAIVRQPQAKIGRQKATKLLIAVWLTAVIFSLPWYLLVRTPTEIHKQGFYHCMYVFHSGTSRMGTAYSICLILVCYLLPFSLMCFCHYNICKTVRLSEIRVRPVTTYAYLLRFYSEMRTATTVLIMIVFIIFCWGPYCLMGLVTAMGDYTFNPAMDTVAIWLAWANGAINPLIYALRNPNISMLLGRSREEGYRTRNIAAYLSSQTHNREVQLNQAERIRDRYVSRVGVNNNSRLSSSSPGKGGGGGEVAMWACKNPAVFFCRDAQPDTATVPNSVSAPKMKTADTSL
SIO_010081: gpr135
subclass of: SO_0000673
so part of: gpr135
location: join(1562248..1562414,1567437..1568787)
location: region:1562248-1568787:1
so has part: feature:1562248-1562414:1:exon
so has part: feature:1567437-1568787:1:exon

XP_027134547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1562248-1562414:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1567437-1568787:1:exon

daam1
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: daam1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1575784..1599792
location: region:1575784-1599792:1
so has part: feature:1575784-1599792:1:exon
subclass of: SO_0000010

104928164
type: Gene
SIO_000068: ncbigene

position:1575784:1
position: 1575784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1599792:1
position: 1599792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1575784-1599792:1:exon

daam1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: daam1
product: dishevelled associated activator of morphogenesis 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_027278752.1
SIO_010081: daam1
subclass of: SO_0000673
so part of: daam1
location: join(1575784..1576296,1582510..1582733,1582827..1582916,1584137..1584208,1584502..1584596,1584703..1584922,1586767..1586880,1587081..1587191,1588514..1588617,1588724..1588790,1588908..1589025,1589125..1589263,1589691..1589749,1590550..1590737,1590817..1591071,1592544..1592651,1593300..1593397,1595087..1595171,1595442..1595548,1595979..1596067,1596196..1596364,1597261..1597368,1597974..1598034,1598145..1598279,1598698..1598868,1598992..1599792)
location: region:1575784-1599792:1
so has part: feature:1575784-1576296:1:exon
so has part: feature:1582510-1582733:1:exon
so has part: feature:1582827-1582916:1:exon
so has part: feature:1584137-1584208:1:exon
so has part: feature:1584502-1584596:1:exon
so has part: feature:1584703-1584922:1:exon
so has part: feature:1586767-1586880:1:exon
so has part: feature:1587081-1587191:1:exon
so has part: feature:1588514-1588617:1:exon
so has part: feature:1588724-1588790:1:exon
so has part: feature:1588908-1589025:1:exon
so has part: feature:1589125-1589263:1:exon
so has part: feature:1589691-1589749:1:exon
so has part: feature:1590550-1590737:1:exon
so has part: feature:1590817-1591071:1:exon
so has part: feature:1592544-1592651:1:exon
so has part: feature:1593300-1593397:1:exon
so has part: feature:1595087-1595171:1:exon
so has part: feature:1595442-1595548:1:exon
so has part: feature:1595979-1596067:1:exon
so has part: feature:1596196-1596364:1:exon
so has part: feature:1597261-1597368:1:exon
so has part: feature:1597974-1598034:1:exon
so has part: feature:1598145-1598279:1:exon
so has part: feature:1598698-1598868:1:exon
so has part: feature:1598992-1599792:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1575784-1576296:1:exon

position:1576296:1
position: 1576296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1582510-1582733:1:exon

position:1582510:1
position: 1582510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582733:1
position: 1582733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1582827-1582916:1:exon

position:1582827:1
position: 1582827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582916:1
position: 1582916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1584137-1584208:1:exon

position:1584137:1
position: 1584137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584208:1
position: 1584208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1584502-1584596:1:exon

position:1584502:1
position: 1584502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584596:1
position: 1584596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1584703-1584922:1:exon

position:1584703:1
position: 1584703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584922:1
position: 1584922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1586767-1586880:1:exon

position:1586767:1
position: 1586767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586880:1
position: 1586880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1587081-1587191:1:exon

position:1587081:1
position: 1587081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587191:1
position: 1587191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1588514-1588617:1:exon

position:1588514:1
position: 1588514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588617:1
position: 1588617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1588724-1588790:1:exon

position:1588724:1
position: 1588724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588790:1
position: 1588790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1588908-1589025:1:exon

position:1588908:1
position: 1588908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1589025:1
position: 1589025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1589125-1589263:1:exon

position:1589125:1
position: 1589125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1589263:1
position: 1589263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1589691-1589749:1:exon

position:1589691:1
position: 1589691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1589749:1
position: 1589749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1590550-1590737:1:exon

position:1590550:1
position: 1590550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1590737:1
position: 1590737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1590817-1591071:1:exon

position:1590817:1
position: 1590817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1591071:1
position: 1591071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1592544-1592651:1:exon

position:1592544:1
position: 1592544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1592651:1
position: 1592651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1593300-1593397:1:exon

position:1593300:1
position: 1593300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1593397:1
position: 1593397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1595087-1595171:1:exon

position:1595087:1
position: 1595087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1595171:1
position: 1595171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1595442-1595548:1:exon

position:1595442:1
position: 1595442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1595548:1
position: 1595548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1595979-1596067:1:exon

position:1595979:1
position: 1595979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1596067:1
position: 1596067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1596196-1596364:1:exon

position:1596196:1
position: 1596196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1596364:1
position: 1596364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1597261-1597368:1:exon

position:1597261:1
position: 1597261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1597368:1
position: 1597368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1597974-1598034:1:exon

position:1597974:1
position: 1597974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1598034:1
position: 1598034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1598145-1598279:1:exon

position:1598145:1
position: 1598145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1598279:1
position: 1598279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1598698-1598868:1:exon

position:1598698:1
position: 1598698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1598868:1
position: 1598868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1598992-1599792:1:exon

position:1598992:1
position: 1598992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

daam1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: daam1
product: dishevelled associated activator of morphogenesis 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019279608.2
SIO_010081: daam1
subclass of: SO_0000673
so part of: daam1
location: join(1575784..1576019,1576179..1576296,1582510..1582733,1582827..1582916,1584137..1584208,1584502..1584596,1584703..1584922,1586767..1586880,1587081..1587191,1588514..1588617,1588724..1588790,1588908..1589025,1589125..1589263,1589691..1589749,1590550..1590737,1590817..1591071,1592544..1592651,1593300..1593397,1595087..1595171,1595442..1595548,1595979..1596067,1596196..1596364,1597261..1597368,1597974..1598034,1598145..1598279,1598698..1598868,1598992..1599792)
location: region:1575784-1599792:1
so has part: feature:1575784-1576019:1:exon
so has part: feature:1576179-1576296:1:exon
so has part: feature:1582510-1582733:1:exon
so has part: feature:1582827-1582916:1:exon
so has part: feature:1584137-1584208:1:exon
so has part: feature:1584502-1584596:1:exon
so has part: feature:1584703-1584922:1:exon
so has part: feature:1586767-1586880:1:exon
so has part: feature:1587081-1587191:1:exon
so has part: feature:1588514-1588617:1:exon
so has part: feature:1588724-1588790:1:exon
so has part: feature:1588908-1589025:1:exon
so has part: feature:1589125-1589263:1:exon
so has part: feature:1589691-1589749:1:exon
so has part: feature:1590550-1590737:1:exon
so has part: feature:1590817-1591071:1:exon
so has part: feature:1592544-1592651:1:exon
so has part: feature:1593300-1593397:1:exon
so has part: feature:1595087-1595171:1:exon
so has part: feature:1595442-1595548:1:exon
so has part: feature:1595979-1596067:1:exon
so has part: feature:1596196-1596364:1:exon
so has part: feature:1597261-1597368:1:exon
so has part: feature:1597974-1598034:1:exon
so has part: feature:1598145-1598279:1:exon
so has part: feature:1598698-1598868:1:exon
so has part: feature:1598992-1599792:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1575784-1576019:1:exon

position:1576019:1
position: 1576019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1576179-1576296:1:exon

position:1576179:1
position: 1576179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1582510-1582733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1582827-1582916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1584137-1584208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1584502-1584596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1584703-1584922:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1586767-1586880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1587081-1587191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1588514-1588617:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1588724-1588790:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1588908-1589025:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1589125-1589263:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1589691-1589749:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1590550-1590737:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1590817-1591071:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1592544-1592651:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1593300-1593397:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1595087-1595171:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1595442-1595548:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1595979-1596067:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1596196-1596364:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1597261-1597368:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1597974-1598034:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1598145-1598279:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1598698-1598868:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1598992-1599792:1:exon

daam1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: daam1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disheveled-associated activator of morphogenesis 1
translation: MESMVKQPQGRSLSSMFSCCFKESGSDQPEITYCHDNSNTMAVMEPTLTMPPPQELDAMFTELVDELDLTVEHRAAMFDLPAEKKWQIYCSKKMEAEENKGATRWPEYYIDQLRSMAARKMLLLMENEEEQGRHNIIDSLKTALRTQPMRFVTRFIELDGLSCILNFLKSMDYETTESQVHTSLIGCIKALMNNSQGRAHVLGHCESINIIAQSLTTENIKTKVAVLEILGAVCLVPGGHRNVLEAMVHYQKFASERTRFQTLVTDLDRSTGRYRDEVNLKTAIMSFINAVLSKGVGETSLEFRIHLRYEFLMLGIQPVIDKLHSHDNETLDRHLDFFEMLRNEDELLMSKRFDAVHIETKSASQMFELIKRNLNHTAAYPHLLSALQHCLMMPYKQSSTTLQYWVLLDRIIQQLVLQTDKGENPDVAPLEDFNVKNIVRMLVKEDEVKQWKEQADKMRKEHQNLQQRFEKKDRECEAKNKEKEDMMAMLNKMKDKLERESNDHTQAKLQVAELSARLQQLSATSSVPGGPPVTSGGLLPPGPVTSIGPAPPPPPPPPPPPPPGGPPAFGMAPPPPPPPPGAPLVSQKKNIPRPSNPLKSFNWSKLPENKIEGTIWKDIDDVKVFKVLDLEEFQKTFSAYQKPQKSTEDDNLFAKKAKELSVIDGRRAQNCNILLSRLKLTNEEIRHAILTMDEQEDLPKDMLEQLMKFVPEKSDVELLEEHKHELDRMAKPDRFLYDMSSINHYQQRLQSLYFKKKFAERVADVKPKIKALSLASREVVQSRMLRQLLEVVLAFGNYMNKGQRGNAFGFKVSSLNKIADTKSSIDKNVTLLHYMITVLEKKYPKVAAFSEELPNVSEAAKVNMTELEKDVGSLRSELRSVEAELKYQQAQSPQGPNDKFVSMVSQFITVASFSFSEVEESLTEAKEVFAKALRHFGEDLSKLQPDMFFGIFDTFITSFSEAKQDNENMARRKEEEERRALAEAQLKKEREQKRKANEAEEGGEFDDLVSALRSGEVFDTDLFKMNRRKQRKHNSFEISRERPVTKLNQ
SIO_010081: daam1
subclass of: SO_0000673
so part of: daam1
location: join(1582542..1582733,1582827..1582916,1584137..1584208,1584502..1584596,1584703..1584922,1586767..1586880,1587081..1587191,1588514..1588617,1588724..1588790,1588908..1589025,1589125..1589263,1589691..1589749,1590550..1590737,1590817..1591071,1592544..1592651,1593300..1593397,1595087..1595171,1595442..1595548,1595979..1596067,1596196..1596364,1597261..1597368,1597974..1598034,1598145..1598279,1598698..1598868,1598992..1599186)
location: region:1582542-1599186:1
so has part: feature:1582542-1582733:1:exon
so has part: feature:1582827-1582916:1:exon
so has part: feature:1584137-1584208:1:exon
so has part: feature:1584502-1584596:1:exon
so has part: feature:1584703-1584922:1:exon
so has part: feature:1586767-1586880:1:exon
so has part: feature:1587081-1587191:1:exon
so has part: feature:1588514-1588617:1:exon
so has part: feature:1588724-1588790:1:exon
so has part: feature:1588908-1589025:1:exon
so has part: feature:1589125-1589263:1:exon
so has part: feature:1589691-1589749:1:exon
so has part: feature:1590550-1590737:1:exon
so has part: feature:1590817-1591071:1:exon
so has part: feature:1592544-1592651:1:exon
so has part: feature:1593300-1593397:1:exon
so has part: feature:1595087-1595171:1:exon
so has part: feature:1595442-1595548:1:exon
so has part: feature:1595979-1596067:1:exon
so has part: feature:1596196-1596364:1:exon
so has part: feature:1597261-1597368:1:exon
so has part: feature:1597974-1598034:1:exon
so has part: feature:1598145-1598279:1:exon
so has part: feature:1598698-1598868:1:exon
so has part: feature:1598992-1599186:1:exon

XP_027134553.1
type: Protein
SIO_000068: ncbiprotein

position:1582542:1
position: 1582542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1599186:1
position: 1599186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1582542-1582733:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1582827-1582916:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1584137-1584208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1584502-1584596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1584703-1584922:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1586767-1586880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1587081-1587191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1588514-1588617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1588724-1588790:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1588908-1589025:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1589125-1589263:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1589691-1589749:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1590550-1590737:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1590817-1591071:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1592544-1592651:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1593300-1593397:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1595087-1595171:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1595442-1595548:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1595979-1596067:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1596196-1596364:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1597261-1597368:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1597974-1598034:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1598145-1598279:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1598698-1598868:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1598992-1599186:1:exon

daam1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: daam1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disheveled-associated activator of morphogenesis 1
translation: MESMVKQPQGRSLSSMFSCCFKESGSDQPEITYCHDNSNTMAVMEPTLTMPPPQELDAMFTELVDELDLTVEHRAAMFDLPAEKKWQIYCSKKMEAEENKGATRWPEYYIDQLRSMAARKMLLLMENEEEQGRHNIIDSLKTALRTQPMRFVTRFIELDGLSCILNFLKSMDYETTESQVHTSLIGCIKALMNNSQGRAHVLGHCESINIIAQSLTTENIKTKVAVLEILGAVCLVPGGHRNVLEAMVHYQKFASERTRFQTLVTDLDRSTGRYRDEVNLKTAIMSFINAVLSKGVGETSLEFRIHLRYEFLMLGIQPVIDKLHSHDNETLDRHLDFFEMLRNEDELLMSKRFDAVHIETKSASQMFELIKRNLNHTAAYPHLLSALQHCLMMPYKQSSTTLQYWVLLDRIIQQLVLQTDKGENPDVAPLEDFNVKNIVRMLVKEDEVKQWKEQADKMRKEHQNLQQRFEKKDRECEAKNKEKEDMMAMLNKMKDKLERESNDHTQAKLQVAELSARLQQLSATSSVPGGPPVTSGGLLPPGPVTSIGPAPPPPPPPPPPPPPGGPPAFGMAPPPPPPPPGAPLVSQKKNIPRPSNPLKSFNWSKLPENKIEGTIWKDIDDVKVFKVLDLEEFQKTFSAYQKPQKSTEDDNLFAKKAKELSVIDGRRAQNCNILLSRLKLTNEEIRHAILTMDEQEDLPKDMLEQLMKFVPEKSDVELLEEHKHELDRMAKPDRFLYDMSSINHYQQRLQSLYFKKKFAERVADVKPKIKALSLASREVVQSRMLRQLLEVVLAFGNYMNKGQRGNAFGFKVSSLNKIADTKSSIDKNVTLLHYMITVLEKKYPKVAAFSEELPNVSEAAKVNMTELEKDVGSLRSELRSVEAELKYQQAQSPQGPNDKFVSMVSQFITVASFSFSEVEESLTEAKEVFAKALRHFGEDLSKLQPDMFFGIFDTFITSFSEAKQDNENMARRKEEEERRALAEAQLKKEREQKRKANEAEEGGEFDDLVSALRSGEVFDTDLFKMNRRKQRKHNSFEISRERPVTKLNQ
SIO_010081: daam1
subclass of: SO_0000673
so part of: daam1
location: join(1582542..1582733,1582827..1582916,1584137..1584208,1584502..1584596,1584703..1584922,1586767..1586880,1587081..1587191,1588514..1588617,1588724..1588790,1588908..1589025,1589125..1589263,1589691..1589749,1590550..1590737,1590817..1591071,1592544..1592651,1593300..1593397,1595087..1595171,1595442..1595548,1595979..1596067,1596196..1596364,1597261..1597368,1597974..1598034,1598145..1598279,1598698..1598868,1598992..1599186)
location: region:1582542-1599186:1
so has part: feature:1582542-1582733:1:exon
so has part: feature:1582827-1582916:1:exon
so has part: feature:1584137-1584208:1:exon
so has part: feature:1584502-1584596:1:exon
so has part: feature:1584703-1584922:1:exon
so has part: feature:1586767-1586880:1:exon
so has part: feature:1587081-1587191:1:exon
so has part: feature:1588514-1588617:1:exon
so has part: feature:1588724-1588790:1:exon
so has part: feature:1588908-1589025:1:exon
so has part: feature:1589125-1589263:1:exon
so has part: feature:1589691-1589749:1:exon
so has part: feature:1590550-1590737:1:exon
so has part: feature:1590817-1591071:1:exon
so has part: feature:1592544-1592651:1:exon
so has part: feature:1593300-1593397:1:exon
so has part: feature:1595087-1595171:1:exon
so has part: feature:1595442-1595548:1:exon
so has part: feature:1595979-1596067:1:exon
so has part: feature:1596196-1596364:1:exon
so has part: feature:1597261-1597368:1:exon
so has part: feature:1597974-1598034:1:exon
so has part: feature:1598145-1598279:1:exon
so has part: feature:1598698-1598868:1:exon
so has part: feature:1598992-1599186:1:exon

XP_019135153.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1582542-1582733:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1582827-1582916:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1584137-1584208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1584502-1584596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1584703-1584922:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1586767-1586880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1587081-1587191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1588514-1588617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1588724-1588790:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1588908-1589025:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1589125-1589263:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1589691-1589749:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1590550-1590737:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1590817-1591071:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1592544-1592651:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1593300-1593397:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1595087-1595171:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1595442-1595548:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1595979-1596067:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1596196-1596364:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1597261-1597368:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1597974-1598034:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1598145-1598279:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1598698-1598868:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1598992-1599186:1:exon

LOC104928162
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104928162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1603298..1614790
location: region:1603298-1614790:1
so has part: feature:1603298-1614790:1:exon
subclass of: SO_0000010

104928162
type: Gene
SIO_000068: ncbigene

position:1603298:1
position: 1603298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1614790:1
position: 1614790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1603298-1614790:1:exon

LOC104928162
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104928162
product: mitogen-activated protein kinase kinase kinase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_010742391.3
SIO_010081: LOC104928162
subclass of: SO_0000673
so part of: LOC104928162
location: join(1603298..1603815,1604975..1605085,1606601..1606666,1607614..1607659,1607766..1607904,1607989..1608113,1608443..1608571,1608724..1608854,1609916..1609976,1610104..1610234,1610314..1610452,1610755..1610816,1611030..1611145,1612651..1614790)
location: region:1603298-1614790:1
so has part: feature:1603298-1603815:1:exon
so has part: feature:1604975-1605085:1:exon
so has part: feature:1606601-1606666:1:exon
so has part: feature:1607614-1607659:1:exon
so has part: feature:1607766-1607904:1:exon
so has part: feature:1607989-1608113:1:exon
so has part: feature:1608443-1608571:1:exon
so has part: feature:1608724-1608854:1:exon
so has part: feature:1609916-1609976:1:exon
so has part: feature:1610104-1610234:1:exon
so has part: feature:1610314-1610452:1:exon
so has part: feature:1610755-1610816:1:exon
so has part: feature:1611030-1611145:1:exon
so has part: feature:1612651-1614790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1603298-1603815:1:exon

position:1603815:1
position: 1603815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1604975-1605085:1:exon

position:1604975:1
position: 1604975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605085:1
position: 1605085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1606601-1606666:1:exon

position:1606601:1
position: 1606601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1606666:1
position: 1606666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1607614-1607659:1:exon

position:1607614:1
position: 1607614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1607659:1
position: 1607659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1607766-1607904:1:exon

position:1607766:1
position: 1607766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1607904:1
position: 1607904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1607989-1608113:1:exon

position:1607989:1
position: 1607989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1608113:1
position: 1608113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1608443-1608571:1:exon

position:1608443:1
position: 1608443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1608571:1
position: 1608571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1608724-1608854:1:exon

position:1608724:1
position: 1608724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1608854:1
position: 1608854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1609916-1609976:1:exon

position:1609916:1
position: 1609916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1609976:1
position: 1609976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1610104-1610234:1:exon

position:1610104:1
position: 1610104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1610234:1
position: 1610234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1610314-1610452:1:exon

position:1610314:1
position: 1610314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1610452:1
position: 1610452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1610755-1610816:1:exon

position:1610755:1
position: 1610755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1610816:1
position: 1610816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1611030-1611145:1:exon

position:1611030:1
position: 1611030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1611145:1
position: 1611145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1612651-1614790:1:exon

position:1612651:1
position: 1612651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104928162
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104928162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 7
translation: MVETPAGCLFEDIQYEDIQVEAAVGRGTFGVVFKAIWKGKDVAIKTIESENERNAFLVELRQLSRVSHPNIVKLYGSCDNPVCLVMEYAECGSLYNLLHSADPQPHYTAAHAMSWCLQCAQGVAYLHAMKPKALIHRDLKPPNLLLVARGTVLKICDFGTACDIQTYMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRKKPFDEIGGSAFCIMWAVHRGTRPPLIKDLPEPIESLMTRCWDKEPSQRPSMEEVKNTMSHLMKYFPGSDEPLKLPHQSSATSSGSYAEYTMSSNRSDDNTEHRNSVGREETLKSSEAKFPLQFKPSKTATLRTGLSRVSSIDSQPGRSQSPTHCTSPVTTTSQSELRMTFSPTATNGLNSSIPLPYLKLDYQLQPLAPCPNSKESMAVFEQHIRMAQEYLKVQSEIAHLVRRKQELVSELEQDQREQQTSSRLLQEHSKLLEDHSSLSMERQGLKTKLSLIQSQNQHHS
SIO_010081: LOC104928162
subclass of: SO_0000673
so part of: LOC104928162
location: join(1603750..1603815,1604975..1605085,1606601..1606666,1607614..1607659,1607766..1607904,1607989..1608113,1608443..1608571,1608724..1608854,1609916..1609976,1610104..1610234,1610314..1610452,1610755..1610816,1611030..1611145,1612651..1612822)
location: region:1603750-1612822:1
so has part: feature:1603750-1603815:1:exon
so has part: feature:1604975-1605085:1:exon
so has part: feature:1606601-1606666:1:exon
so has part: feature:1607614-1607659:1:exon
so has part: feature:1607766-1607904:1:exon
so has part: feature:1607989-1608113:1:exon
so has part: feature:1608443-1608571:1:exon
so has part: feature:1608724-1608854:1:exon
so has part: feature:1609916-1609976:1:exon
so has part: feature:1610104-1610234:1:exon
so has part: feature:1610314-1610452:1:exon
so has part: feature:1610755-1610816:1:exon
so has part: feature:1611030-1611145:1:exon
so has part: feature:1612651-1612822:1:exon

XP_010740693.1
type: Protein
SIO_000068: ncbiprotein

position:1603750:1
position: 1603750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1612822:1
position: 1612822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1603750-1603815:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1604975-1605085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1606601-1606666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1607614-1607659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1607766-1607904:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1607989-1608113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1608443-1608571:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1608724-1608854:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1609916-1609976:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1610104-1610234:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1610314-1610452:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1610755-1610816:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1611030-1611145:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1612651-1612822:1:exon

LOC104928168
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104928168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1619738..1665079
location: region:1619738-1665079:1
so has part: feature:1619738-1665079:1:exon
subclass of: SO_0000010

104928168
type: Gene
SIO_000068: ncbigene

position:1619738:1
position: 1619738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1665079:1
position: 1665079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1619738-1665079:1:exon

LOC104928168
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104928168
product: transcription regulator protein BACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_010742397.3
SIO_010081: LOC104928168
subclass of: SO_0000673
so part of: LOC104928168
location: join(1619738..1620104,1645131..1645413,1649875..1651302,1657112..1657318,1658868..1665079)
location: region:1619738-1665079:1
so has part: feature:1619738-1620104:1:exon
so has part: feature:1645131-1645413:1:exon
so has part: feature:1649875-1651302:1:exon
so has part: feature:1657112-1657318:1:exon
so has part: feature:1658868-1665079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1619738-1620104:1:exon

position:1620104:1
position: 1620104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1645131-1645413:1:exon

position:1645131:1
position: 1645131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1645413:1
position: 1645413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1649875-1651302:1:exon

position:1649875:1
position: 1649875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651302:1
position: 1651302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1657112-1657318:1:exon

position:1657112:1
position: 1657112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1657318:1
position: 1657318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1658868-1665079:1:exon

position:1658868:1
position: 1658868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104928168
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104928168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription regulator protein BACH2
translation: MSTGEEQDGEAVAPVYVYESKVHCANVLLSLEEQRRQGILCDVTILVEGREVRAHRAVLAASSRYFLQALLGHNGSPGEVEPIINLPDKVTAKGFAPLLQFAYTAKLVLSRENIHEVILCADFLGVHNLEDSCFRFLQAQLQNDDQHASNSKVEYDDDITAEGAVFSEGVSLDDSTEARQQSNHVANTVSPPADLSQCPKYRKYQYQICDNKHNGENHGSDNVILANHTSVSPVSSQLTDRSATQTLLTPSRIKEEQFVFEEEGDERSGCNTELCTEEVLEMELEVEGVPVAAEHSPSRGSPSSCLRSYLQRGGLDLSSVPSTTIQQLLTNRLSLNHYRELVKERQRDKRESLGRVDLKTGVADVIPAALTGIGKNMERPVSKASSSKHEGELDRCSVIFSSAGSERQMLAHSYMDEKFREKVSTLMQVEAPSSGQSCLTTSCPIPIKTSAHSPPPSEPRTQTSSSRSSFSYPEDTGSGSSPSSLPHFDFSSSPHSGSTSGLSHCLAGVVEQRNPHSGEVVFSQGCNKIKSERGFGASGGNSSDESGSFSEGDSESGISRVSGPEVKLPFPVDQITNLPRNDFQILIKMHKLTSEQLEFIHDIRRRSKNRIAAQRCRKRKLDCIQNLEGEIRKLVCEKEKLLSERNQLKVCMSELWQNLSFLSQQVCREVQGTQPPPVSASIDLTSNPPSPSSDEGSSQPRSPVLQHSDGACLSEVGPSQGELEDRRPGVEVSGLGQENPECPLVLGSTEEVCSPTVTVDFCQEMTEKCTTEEQKRQACT
SIO_010081: LOC104928168
subclass of: SO_0000673
so part of: LOC104928168
location: join(1645147..1645413,1649875..1651302,1657112..1657318,1658868..1659308)
location: region:1645147-1659308:1
so has part: feature:1645147-1645413:1:exon
so has part: feature:1649875-1651302:1:exon
so has part: feature:1657112-1657318:1:exon
so has part: feature:1658868-1659308:1:exon

XP_010740699.1
type: Protein
SIO_000068: ncbiprotein

position:1645147:1
position: 1645147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1659308:1
position: 1659308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1645147-1645413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1649875-1651302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1657112-1657318:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1658868-1659308:1:exon

LOC104928167
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104928167
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1666157..1667626)
location: region:1666157-1667626:-1
so has part: feature:1666157-1667626:-1:exon
subclass of: SO_0000010

104928167
type: Gene
SIO_000068: ncbigene

position:1666157:-1
position: 1666157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1667626:-1
position: 1667626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1666157-1667626:-1:exon

LOC104928167
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104928167
product: gap junction alpha-10 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins
transcript id: XM_010742396.1
SIO_010081: LOC104928167
subclass of: SO_0000673
so part of: LOC104928167
location: complement(1666157..1667626)
location: region:1666157-1667626:-1
so has part: feature:1666157-1667626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1666157-1667626:-1:exon

LOC104928167
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104928167
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction alpha-10 protein-like
translation: MGDWNLLGSILEEVHIHSTIVGKIWLTILFIFRMLILGAAAEDVWDDEQSEFVCNTDQPGCKAVCYDRAFPISLIRFWVLQVIFVSAPSLVYMGHALYCIRSLEKDRHRKKAQLKEELDEAELALDEHKRMERELRRLDEQRRVKKAPLRGSLLRTYIIHILTRSVVEVCFILGQYILYGIQLEPLYKCERLPCPNSVDCYISRPTEKTIFMVFMIAIAGVSLFLNILEISHLGIRKIKQTLYGERYTEDDTLSYKKKASLAQLCVMSNVSPHNGPLTQTFKVIPEADMKPPYYNTVLKANQNATRHNSLAHLGYSQTSYICPHPMMPPRSGQNCAIEAPLTHEGPEVCTAMVDPHPAWASAVSNVEGSITSHNEDPHEGEHPHPSHFEALLSTSALRPSTFRDLNEDRQKESMGSQVLIPNPRKTSFMIRPPSESLSSISGSTSPSLHTSEESDELGSLQGDMPMMPPPGGRRMSMASKELRLPHVSK
SIO_010081: LOC104928167
subclass of: SO_0000673
so part of: LOC104928167
location: complement(1666157..1667626)
location: region:1666157-1667626:-1
so has part: feature:1666157-1667626:-1:exon

XP_010740698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1666157-1667626:-1:exon

LOC109143172
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC109143172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1684672..1686393)
location: region:1684672-1686393:-1
so has part: feature:1684672-1686393:-1:exon
subclass of: SO_0000010

109143172
type: Gene
SIO_000068: ncbigene

position:1684672:-1
position: 1684672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1686393:-1
position: 1686393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1684672-1686393:-1:exon

LOC109143172
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC109143172
product: piggyBac transposable element-derived protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019279615.2
SIO_010081: LOC109143172
subclass of: SO_0000673
so part of: LOC109143172
location: complement(join(1684672..1685107,1685319..1686280,1686363..1686393))
location: region:1684672-1686393:-1
so has part: feature:1686363-1686393:-1:exon
so has part: feature:1685319-1686280:-1:exon
so has part: feature:1684672-1685107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1686363-1686393:-1:exon

position:1686363:-1
position: 1686363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1685319-1686280:-1:exon

position:1685319:-1
position: 1685319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1686280:-1
position: 1686280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1684672-1685107:-1:exon

position:1685107:-1
position: 1685107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109143172
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC109143172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: piggyBac transposable element-derived protein 4-like
translation: MEDQEEDKGAGSTHYARARISSPKTSFELFITEEVIQLILKNTNLEGRRTTEDWMDVNKVELWAFISLLILAGLYRSWNEATQSLWAEHTGRAIFRATMSRKRFMQISTALRFDDRLSRPARQRRDKLAAIRELWDVWSTRLPVLFTPGRDVCVDEQLVPFKGRCLFKEYIPSKPAKYGLKVWVLCDVETSYAWKMQVYTGRSPGAMREVNQGMRVALEMTEGLEGHTVTVDNFFTSFPLAEELHKWKMTLVGTLRKNKPELPPQLLQTRLRPVVFSRTQTAVSYIPKKGKNVVLLSTKHRDPAVEEGPKRKPKIIVDYNHCKDAVDNLDKVVGTYSCSRRSSRWPQTLFCNILNVSAFNAYILYTDVNPSWNERKLFRRRLFLEDLGKSLVAPLMACRQRMPRTAEAAELVAQVQDQVEELAAAEARPSKKSHRQCTFCRKERRCIPSVLSAISIFAKST
SIO_010081: LOC109143172
subclass of: SO_0000673
so part of: LOC109143172
location: complement(join(1684715..1685107,1685319..1686280,1686363..1686393))
location: region:1684715-1686393:-1
so has part: feature:1686363-1686393:-1:exon
so has part: feature:1685319-1686280:-1:exon
so has part: feature:1684715-1685107:-1:exon

XP_019135160.2
type: Protein
SIO_000068: ncbiprotein

position:1684715:-1
position: 1684715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1686363-1686393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1685319-1686280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1684715-1685107:-1:exon

LOC104939161
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104939161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1720051..1760807
location: region:1720051-1760807:1
so has part: feature:1720051-1760807:1:exon
subclass of: SO_0000010

104939161
type: Gene
SIO_000068: ncbigene

position:1720051:1
position: 1720051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1760807:1
position: 1760807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1720051-1760807:1:exon

LOC104939161
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104939161
product: dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_027278755.1
SIO_010081: LOC104939161
subclass of: SO_0000673
so part of: LOC104939161
location: join(1720051..1720423,1720660..1720765,1722555..1722694,1724431..1724573,1724775..1724927,1728236..1728441,1739977..1740080,1740248..1740393,1750952..1751033,1752118..1752278,1754089..1754314,1757466..1757673,1759282..1759402,1759521..1759635,1760300..1760402,1760491..1760560,1760656..1760807)
location: region:1720051-1760807:1
so has part: feature:1720051-1720423:1:exon
so has part: feature:1720660-1720765:1:exon
so has part: feature:1722555-1722694:1:exon
so has part: feature:1724431-1724573:1:exon
so has part: feature:1724775-1724927:1:exon
so has part: feature:1728236-1728441:1:exon
so has part: feature:1739977-1740080:1:exon
so has part: feature:1740248-1740393:1:exon
so has part: feature:1750952-1751033:1:exon
so has part: feature:1752118-1752278:1:exon
so has part: feature:1754089-1754314:1:exon
so has part: feature:1757466-1757673:1:exon
so has part: feature:1759282-1759402:1:exon
so has part: feature:1759521-1759635:1:exon
so has part: feature:1760300-1760402:1:exon
so has part: feature:1760491-1760560:1:exon
so has part: feature:1760656-1760807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1720051-1720423:1:exon

position:1720423:1
position: 1720423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1720660-1720765:1:exon

position:1720660:1
position: 1720660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1720765:1
position: 1720765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1722555-1722694:1:exon

position:1722555:1
position: 1722555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1722694:1
position: 1722694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1724431-1724573:1:exon

position:1724431:1
position: 1724431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1724573:1
position: 1724573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1724775-1724927:1:exon

position:1724775:1
position: 1724775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1724927:1
position: 1724927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1728236-1728441:1:exon

position:1728236:1
position: 1728236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1728441:1
position: 1728441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1739977-1740080:1:exon

position:1739977:1
position: 1739977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1740080:1
position: 1740080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1740248-1740393:1:exon

position:1740248:1
position: 1740248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1740393:1
position: 1740393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1750952-1751033:1:exon

position:1750952:1
position: 1750952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1751033:1
position: 1751033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1752118-1752278:1:exon

position:1752118:1
position: 1752118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1752278:1
position: 1752278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1754089-1754314:1:exon

position:1754089:1
position: 1754089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1754314:1
position: 1754314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1757466-1757673:1:exon

position:1757466:1
position: 1757466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1757673:1
position: 1757673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1759282-1759402:1:exon

position:1759282:1
position: 1759282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1759402:1
position: 1759402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1759521-1759635:1:exon

position:1759521:1
position: 1759521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1759635:1
position: 1759635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1760300-1760402:1:exon

position:1760300:1
position: 1760300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1760402:1
position: 1760402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1760491-1760560:1:exon

position:1760491:1
position: 1760491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1760560:1
position: 1760560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1760656-1760807:1:exon

position:1760656:1
position: 1760656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104939161
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104939161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1
translation: MTDSSSAPLSSYIMDEETLKRKQKEKLKKLMATGGNPRPVRSLLFLTLKNPFRKACISIVEWKPFEIIILLAIFANCVALAVYLPMPEEDSNNTNSNLESLEYIFLIIFSIECFLKIVAYGFLFHADAYLRNCWNILDFVCVSVGLFTVAVDAINHISGVEAPVGEKGGGFDMKALRAFRVLRPLRLVSGVPSLQVVMNSILKSMLPLFHITLLVLFMVTIYSIMGLELFKCKMHKTCYYTGTNIIATVQNEKQAPCAQAGNGRRCTINGTECRAGWPGPNHGITHFDNLGFSMLTVYQCITTQGWTDVLYWVNDAIGMEWPWIYFTTLILVGSFFVLNLVLGVLSGEFTKEREKAKSRGEFQKLRETQQLDEDLKGYMEWITQAEVIDNDQEGHGLLTTENGGSETGSVSKMDTMQLIIYHYKLARKWNRWLRRKCRVYVKSRLFYWWVIVLVFFNTLAISTEHHKQSQRLTNWQDNANKLLLSMFALEMFIKMYALGLPSYFMSLFNRFDCFVVSTGIMELILVHMGIMSVMGISVLRCIRLLRLLKVTRYWTSLSNLVASLLNSVRSIACLLLLLFLFIVIFSLLGMQVFGGKFNFPNQPKPRSTFDSFPQALITVFQILTGEDWNAVMYDGIMAHGGPSMPGILVSIYFIILFVCGNFILLNVFLAIAVDNLAEAESLTLAQKEKAEEKKRKKALRANMPDRMSEEKANLVKKLAEQRAKGVEGIPTTAKLKIDEFESNVNEIKDPFPPADFPGDDEEEDPEIPESPRPRPMADLQLKEEAVPMPEASSFFIFGPQNKYDAIN
SIO_010081: LOC104939161
subclass of: SO_0000673
so part of: LOC104939161
location: join(1720236..1720423,1720660..1720765,1722555..1722694,1724431..1724573,1724775..1724927,1728236..1728441,1739977..1740080,1740248..1740393,1750952..1751033,1752118..1752278,1754089..1754314,1757466..1757673,1759282..1759402,1759521..1759635,1760300..1760402,1760491..1760560,1760656..1760807)
location: region:1720236-1760807:1
so has part: feature:1720236-1720423:1:exon
so has part: feature:1720660-1720765:1:exon
so has part: feature:1722555-1722694:1:exon
so has part: feature:1724431-1724573:1:exon
so has part: feature:1724775-1724927:1:exon
so has part: feature:1728236-1728441:1:exon
so has part: feature:1739977-1740080:1:exon
so has part: feature:1740248-1740393:1:exon
so has part: feature:1750952-1751033:1:exon
so has part: feature:1752118-1752278:1:exon
so has part: feature:1754089-1754314:1:exon
so has part: feature:1757466-1757673:1:exon
so has part: feature:1759282-1759402:1:exon
so has part: feature:1759521-1759635:1:exon
so has part: feature:1760300-1760402:1:exon
so has part: feature:1760491-1760560:1:exon
so has part: feature:1760656-1760807:1:exon

XP_027134556.1
type: Protein
SIO_000068: ncbiprotein

position:1720236:1
position: 1720236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1720236-1720423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1720660-1720765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1722555-1722694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1724431-1724573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1724775-1724927:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1728236-1728441:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1739977-1740080:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1740248-1740393:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1750952-1751033:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1752118-1752278:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1754089-1754314:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1757466-1757673:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1759282-1759402:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1759521-1759635:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1760300-1760402:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1760491-1760560:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1760656-1760807:1:exon

LOC104929630
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104929630
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1820656..1823298
location: region:1820656-1823298:1
so has part: feature:1820656-1823298:1:exon
subclass of: SO_0000010

104929630
type: Gene
SIO_000068: ncbigene

position:1820656:1
position: 1820656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1823298:1
position: 1823298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1820656-1823298:1:exon

LOC104929630
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104929630
product: E3 ubiquitin-protein ligase TRIM21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_010744200.3
SIO_010081: LOC104929630
subclass of: SO_0000673
so part of: LOC104929630
location: join(1820656..1820770,1821053..1823298)
location: region:1820656-1823298:1
so has part: feature:1820656-1820770:1:exon
so has part: feature:1821053-1823298:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1820656-1820770:1:exon

position:1820770:1
position: 1820770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1821053-1823298:1:exon

position:1821053:1
position: 1821053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104929630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104929630
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM21
translation: MSAASSLLSEDQFLCSICLDVFTDPVSTPCGHNFCKKCITTNWDLNFPCQCPNCKKTFNTRPELQVNTFISEMVAHFRKSAEQKTGSSSEKQAVQAGEVPCDVCTGTKLKALKSCLVCLVSYCETHLEPHVTMPGLKRHQLIDPVTNLESRMCTKHDKLLELFCKDDQTCVCMLCTISEHKVHEVVPLEEEYEGKKAELGKKGAELLQMIQERQLKIEELKRSVEVSWENAYGEIKAGVCAFTKLKYIIQRNQTKVIEMIEEKHKTTEKQADGFIKELQEEISELKKKSAELEQVSHSEDHCNLLQNFPSLNAAPPTKDWKEVRVHLPSYDGSVRTTVAQLVEMVENEMKKLFPKADLKTAQQSAVEVTLDPDTANPELILSEDGKQVHHGNTKRNLPNNPERFSYCACVLGKPIDYSGRFYFEVQVKGKTQWVVGVAKESVNRKGRISINHKNGYWTVCLSKETVYCASTDPPVRLPLKAKLEKVGVFVDYEQGLVFFYDVNAADLIYAFTGCSFTEKLLPLFCPSFNQGGKNSAPLIICPVNPTK
SIO_010081: LOC104929630
subclass of: SO_0000673
so part of: LOC104929630
location: 1821065..1822708
location: region:1821065-1822708:1
so has part: feature:1821065-1822708:1:exon

XP_010742502.3
type: Protein
SIO_000068: ncbiprotein

position:1821065:1
position: 1821065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1822708:1
position: 1822708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1821065-1822708:1:exon

LOC113745758
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC113745758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1823778..1843814
location: region:1823778-1843814:1
so has part: feature:1823778-1843814:1:exon
subclass of: SO_0000011

113745758
type: Gene
SIO_000068: ncbigene

position:1823778:1
position: 1823778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1843814:1
position: 1843814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1823778-1843814:1:exon

LOC113745758
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 215358
nc RNA class: lncRNA
gene: LOC113745758
product: uncharacterized LOC113745758
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003462380.1
SIO_010081: LOC113745758
subclass of: SO_0000673
so part of: LOC113745758
location: join(1823778..1823960,1841733..1841863,1843326..1843814)
location: region:1823778-1843814:1
so has part: feature:1823778-1823960:1:exon
so has part: feature:1841733-1841863:1:exon
so has part: feature:1843326-1843814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1823778-1823960:1:exon

position:1823960:1
position: 1823960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1841733-1841863:1:exon

position:1841733:1
position: 1841733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1841863:1
position: 1841863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1843326-1843814:1:exon

position:1843326:1
position: 1843326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104929631
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104929631
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1879479..1931195
location: region:1879479-1931195:1
so has part: feature:1879479-1931195:1:exon
subclass of: SO_0000010

104929631
type: Gene
SIO_000068: ncbigene

position:1879479:1
position: 1879479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1931195:1
position: 1931195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1879479-1931195:1:exon

LOC104929631
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104929631
product: protein jagged-2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_019260251.2
SIO_010081: LOC104929631
subclass of: SO_0000673
so part of: LOC104929631
location: join(1879479..1879859,1880728..1881051,1897761..1897818,1905829..1906089,1906967..1907027,1911937..1912067,1912615..1912734,1912824..1912937,1913732..1913845,1915791..1915904,1916901..1916947,1917506..1917679,1917778..1917928,1918057..1918221,1918728..1918841,1919490..1919603,1919951..1920064,1920225..1920341,1920644..1920671,1922300..1922385,1922931..1923044,1923202..1923317,1923413..1923676,1924911..1925042,1927884..1928043,1928179..1931195)
location: region:1879479-1931195:1
so has part: feature:1879479-1879859:1:exon
so has part: feature:1880728-1881051:1:exon
so has part: feature:1897761-1897818:1:exon
so has part: feature:1905829-1906089:1:exon
so has part: feature:1906967-1907027:1:exon
so has part: feature:1911937-1912067:1:exon
so has part: feature:1912615-1912734:1:exon
so has part: feature:1912824-1912937:1:exon
so has part: feature:1913732-1913845:1:exon
so has part: feature:1915791-1915904:1:exon
so has part: feature:1916901-1916947:1:exon
so has part: feature:1917506-1917679:1:exon
so has part: feature:1917778-1917928:1:exon
so has part: feature:1918057-1918221:1:exon
so has part: feature:1918728-1918841:1:exon
so has part: feature:1919490-1919603:1:exon
so has part: feature:1919951-1920064:1:exon
so has part: feature:1920225-1920341:1:exon
so has part: feature:1920644-1920671:1:exon
so has part: feature:1922300-1922385:1:exon
so has part: feature:1922931-1923044:1:exon
so has part: feature:1923202-1923317:1:exon
so has part: feature:1923413-1923676:1:exon
so has part: feature:1924911-1925042:1:exon
so has part: feature:1927884-1928043:1:exon
so has part: feature:1928179-1931195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1879479-1879859:1:exon

position:1879859:1
position: 1879859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1880728-1881051:1:exon

position:1880728:1
position: 1880728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1881051:1
position: 1881051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1897761-1897818:1:exon

position:1897761:1
position: 1897761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1897818:1
position: 1897818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1905829-1906089:1:exon

position:1905829:1
position: 1905829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1906089:1
position: 1906089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1906967-1907027:1:exon

position:1906967:1
position: 1906967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1907027:1
position: 1907027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1911937-1912067:1:exon

position:1911937:1
position: 1911937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1912067:1
position: 1912067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1912615-1912734:1:exon

position:1912615:1
position: 1912615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1912734:1
position: 1912734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1912824-1912937:1:exon

position:1912824:1
position: 1912824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1912937:1
position: 1912937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1913732-1913845:1:exon

position:1913732:1
position: 1913732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1913845:1
position: 1913845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1915791-1915904:1:exon

position:1915791:1
position: 1915791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1915904:1
position: 1915904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1916901-1916947:1:exon

position:1916901:1
position: 1916901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1916947:1
position: 1916947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1917506-1917679:1:exon

position:1917506:1
position: 1917506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1917679:1
position: 1917679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1917778-1917928:1:exon

position:1917778:1
position: 1917778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1917928:1
position: 1917928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1918057-1918221:1:exon

position:1918057:1
position: 1918057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1918221:1
position: 1918221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1918728-1918841:1:exon

position:1918728:1
position: 1918728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1918841:1
position: 1918841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1919490-1919603:1:exon

position:1919490:1
position: 1919490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1919603:1
position: 1919603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1919951-1920064:1:exon

position:1919951:1
position: 1919951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1920064:1
position: 1920064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1920225-1920341:1:exon

position:1920225:1
position: 1920225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1920341:1
position: 1920341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1920644-1920671:1:exon

position:1920644:1
position: 1920644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1920671:1
position: 1920671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1922300-1922385:1:exon

position:1922300:1
position: 1922300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1922385:1
position: 1922385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1922931-1923044:1:exon

position:1922931:1
position: 1922931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1923044:1
position: 1923044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1923202-1923317:1:exon

position:1923202:1
position: 1923202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1923317:1
position: 1923317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1923413-1923676:1:exon

position:1923413:1
position: 1923413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1923676:1
position: 1923676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1924911-1925042:1:exon

position:1924911:1
position: 1924911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1925042:1
position: 1925042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1927884-1928043:1:exon

position:1927884:1
position: 1927884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1928043:1
position: 1928043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1928179-1931195:1:exon

position:1928179:1
position: 1928179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104929631
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104929631
product: protein jagged-2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_027278727.1
SIO_010081: LOC104929631
subclass of: SO_0000673
so part of: LOC104929631
location: join(1879479..1879859,1880728..1881051,1897761..1897818,1905829..1906089,1906967..1907027,1911937..1912067,1912615..1912734,1912824..1912937,1913732..1913845,1916901..1916947,1917506..1917679,1917778..1917928,1918057..1918221,1918728..1918841,1919490..1919603,1919951..1920064,1920225..1920341,1920644..1920671,1922300..1922385,1922931..1923044,1923202..1923317,1923413..1923676,1924911..1925042,1927884..1928043,1928179..1931195)
location: region:1879479-1931195:1
so has part: feature:1879479-1879859:1:exon
so has part: feature:1880728-1881051:1:exon
so has part: feature:1897761-1897818:1:exon
so has part: feature:1905829-1906089:1:exon
so has part: feature:1906967-1907027:1:exon
so has part: feature:1911937-1912067:1:exon
so has part: feature:1912615-1912734:1:exon
so has part: feature:1912824-1912937:1:exon
so has part: feature:1913732-1913845:1:exon
so has part: feature:1916901-1916947:1:exon
so has part: feature:1917506-1917679:1:exon
so has part: feature:1917778-1917928:1:exon
so has part: feature:1918057-1918221:1:exon
so has part: feature:1918728-1918841:1:exon
so has part: feature:1919490-1919603:1:exon
so has part: feature:1919951-1920064:1:exon
so has part: feature:1920225-1920341:1:exon
so has part: feature:1920644-1920671:1:exon
so has part: feature:1922300-1922385:1:exon
so has part: feature:1922931-1923044:1:exon
so has part: feature:1923202-1923317:1:exon
so has part: feature:1923413-1923676:1:exon
so has part: feature:1924911-1925042:1:exon
so has part: feature:1927884-1928043:1:exon
so has part: feature:1928179-1931195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1879479-1879859:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1880728-1881051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1897761-1897818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1905829-1906089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1906967-1907027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1911937-1912067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1912615-1912734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1912824-1912937:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1913732-1913845:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1916901-1916947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1917506-1917679:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1917778-1917928:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1918057-1918221:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1918728-1918841:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1919490-1919603:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1919951-1920064:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1920225-1920341:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1920644-1920671:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1922300-1922385:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1922931-1923044:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1923202-1923317:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1923413-1923676:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1924911-1925042:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1927884-1928043:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1928179-1931195:1:exon

LOC104929631
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104929631
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein jagged-2 isoform X1
translation: MWNNLGKVQCFSLVCLLLTLRAEVSQSTGYFELQLISVENPKGQLLNGDCCDAEKSAAEGHCGADECDTYFKVCLKEYQTEVTTNGPCTYGSETTKVIGGNTFQFKGGQKSGQNRNNDAGKIIIPFQFAWPRAYTVIVEAWDKDNGTHSNDDELLIERSIHKGMINPGEEKQTEEYKSLIARLEYTIRVRCDEHYYGSKCNKVCRPRDDYFGHYVCDQFGNLECMEGWTNLTSSCKSAICKQGCSLEHGTCSMPGECKCNYGWQGPLCDECLPYPGCVHGTCSEPWQCTCEKNWGGLLCDKDLNYCGTNRPCKNGGTCMNTEPDEYNCACPDGYSGKNCEIAEHACVSNPCANGGTCHEVPSGFECHCPAGWSGPTCAKDTDECASSPCAQGGTCIDMENGFECLCPPQWTGKTCQRDVNECAGKPCLNAYSCKNLIGGYHCACFRGWVGQNCDINMNSCHGQCQNGGTCKGVARGYQCVCQAGFLGRHCEVQRNRCASSPCRNGGRCHALLDGFMCECPQGFAGTTCEVQNDPCSPNPCHNKAQCHSLMGDFYCSCPDDYEGKTCSELKDHCKTNQCQVIDSCTVAVATNDTQKRVWHISSNVCGPHGRCISLPAGNFSCSCEAGFTGTYCHENINDCASSPCKNGGTCIDGINSFQCFCPDGWEGSLCDVDVNECNRNPCQNGGQCVDLLNDFYCNCVDNWKGKTCHSRESQCDSTTCSNGGTCYDHGDSFLCSCPSGWGGSTCNTAKNSTCDSGPCENGGTCVGGGDAFTCICKDGWEGPTCAQNVDDCSPHPCYNGGICVDGVNWFRCECAPGFAGPDCRINIDECQSSPCAEGSTCMDEINGYRCVCPPGHAGPRCQEFIGLGKSCRHAGLQFPHGSRWEEECNACQCVNGYVRCSKVRCGRRPCLLPKALPPPADTNPASCPGGHECVEHQFLTCFSPPCHQWGVCSTPDPPTPLHTQCEPNSGYLDNRCARITLIFKKDKVPQGTTVENICSELRYLPVTQTLAEERALLILCDLSYSNSDAVEVAMSFEQDGQSKDSDRGQIQKAASAIISALSKRHNSTIMLAVVEVKVEKQVDSPPVGYLVPVLCVVFSLLWIFCIVVCVWWTRKRKKERERARSDETMVNNQLRDRNVPNKDNRDKDIQYECKKLMGPSDRTCDGAEGEEEGQQAEQEDDEERALGEKCPPQKCSIAGPQDRGMMGKGGVICTTRSGPDKAPHRTANSPKDNRCKNLNAAKLSEDIKDHYV
SIO_010081: LOC104929631
subclass of: SO_0000673
so part of: LOC104929631
location: join(1879791..1879859,1880728..1881051,1897761..1897818,1905829..1906089,1906967..1907027,1911937..1912067,1912615..1912734,1912824..1912937,1913732..1913845,1915791..1915904,1916901..1916947,1917506..1917679,1917778..1917928,1918057..1918221,1918728..1918841,1919490..1919603,1919951..1920064,1920225..1920341,1920644..1920671,1922300..1922385,1922931..1923044,1923202..1923317,1923413..1923676,1924911..1925042,1927884..1928043,1928179..1928675)
location: region:1879791-1928675:1
so has part: feature:1879791-1879859:1:exon
so has part: feature:1880728-1881051:1:exon
so has part: feature:1897761-1897818:1:exon
so has part: feature:1905829-1906089:1:exon
so has part: feature:1906967-1907027:1:exon
so has part: feature:1911937-1912067:1:exon
so has part: feature:1912615-1912734:1:exon
so has part: feature:1912824-1912937:1:exon
so has part: feature:1913732-1913845:1:exon
so has part: feature:1915791-1915904:1:exon
so has part: feature:1916901-1916947:1:exon
so has part: feature:1917506-1917679:1:exon
so has part: feature:1917778-1917928:1:exon
so has part: feature:1918057-1918221:1:exon
so has part: feature:1918728-1918841:1:exon
so has part: feature:1919490-1919603:1:exon
so has part: feature:1919951-1920064:1:exon
so has part: feature:1920225-1920341:1:exon
so has part: feature:1920644-1920671:1:exon
so has part: feature:1922300-1922385:1:exon
so has part: feature:1922931-1923044:1:exon
so has part: feature:1923202-1923317:1:exon
so has part: feature:1923413-1923676:1:exon
so has part: feature:1924911-1925042:1:exon
so has part: feature:1927884-1928043:1:exon
so has part: feature:1928179-1928675:1:exon

XP_019115796.1
type: Protein
SIO_000068: ncbiprotein

position:1879791:1
position: 1879791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1928675:1
position: 1928675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1879791-1879859:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1880728-1881051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1897761-1897818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1905829-1906089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1906967-1907027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1911937-1912067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1912615-1912734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1912824-1912937:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1913732-1913845:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1915791-1915904:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1916901-1916947:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1917506-1917679:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1917778-1917928:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1918057-1918221:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1918728-1918841:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1919490-1919603:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1919951-1920064:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1920225-1920341:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1920644-1920671:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1922300-1922385:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1922931-1923044:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1923202-1923317:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1923413-1923676:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1924911-1925042:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1927884-1928043:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1928179-1928675:1:exon

LOC104929631
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104929631
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein jagged-2 isoform X2
translation: MWNNLGKVQCFSLVCLLLTLRAEVSQSTGYFELQLISVENPKGQLLNGDCCDAEKSAAEGHCGADECDTYFKVCLKEYQTEVTTNGPCTYGSETTKVIGGNTFQFKGGQKSGQNRNNDAGKIIIPFQFAWPRAYTVIVEAWDKDNGTHSNDDELLIERSIHKGMINPGEEKQTEEYKSLIARLEYTIRVRCDEHYYGSKCNKVCRPRDDYFGHYVCDQFGNLECMEGWTNLTSSCKSAICKQGCSLEHGTCSMPGECKCNYGWQGPLCDECLPYPGCVHGTCSEPWQCTCEKNWGGLLCDKDLNYCGTNRPCKNGGTCMNTEPDEYNCACPDGYSGKNCEIAEHACVSNPCANGGTCHEVPSGFECHCPAGWSGPTCAKDTDECASSPCAQGGTCIDMENGFECLCPPQWTGKTCQRDMNSCHGQCQNGGTCKGVARGYQCVCQAGFLGRHCEVQRNRCASSPCRNGGRCHALLDGFMCECPQGFAGTTCEVQNDPCSPNPCHNKAQCHSLMGDFYCSCPDDYEGKTCSELKDHCKTNQCQVIDSCTVAVATNDTQKRVWHISSNVCGPHGRCISLPAGNFSCSCEAGFTGTYCHENINDCASSPCKNGGTCIDGINSFQCFCPDGWEGSLCDVDVNECNRNPCQNGGQCVDLLNDFYCNCVDNWKGKTCHSRESQCDSTTCSNGGTCYDHGDSFLCSCPSGWGGSTCNTAKNSTCDSGPCENGGTCVGGGDAFTCICKDGWEGPTCAQNVDDCSPHPCYNGGICVDGVNWFRCECAPGFAGPDCRINIDECQSSPCAEGSTCMDEINGYRCVCPPGHAGPRCQEFIGLGKSCRHAGLQFPHGSRWEEECNACQCVNGYVRCSKVRCGRRPCLLPKALPPPADTNPASCPGGHECVEHQFLTCFSPPCHQWGVCSTPDPPTPLHTQCEPNSGYLDNRCARITLIFKKDKVPQGTTVENICSELRYLPVTQTLAEERALLILCDLSYSNSDAVEVAMSFEQDGQSKDSDRGQIQKAASAIISALSKRHNSTIMLAVVEVKVEKQVDSPPVGYLVPVLCVVFSLLWIFCIVVCVWWTRKRKKERERARSDETMVNNQLRDRNVPNKDNRDKDIQYECKKLMGPSDRTCDGAEGEEEGQQAEQEDDEERALGEKCPPQKCSIAGPQDRGMMGKGGVICTTRSGPDKAPHRTANSPKDNRCKNLNAAKLSEDIKDHYV
SIO_010081: LOC104929631
subclass of: SO_0000673
so part of: LOC104929631
location: join(1879791..1879859,1880728..1881051,1897761..1897818,1905829..1906089,1906967..1907027,1911937..1912067,1912615..1912734,1912824..1912937,1913732..1913845,1916901..1916947,1917506..1917679,1917778..1917928,1918057..1918221,1918728..1918841,1919490..1919603,1919951..1920064,1920225..1920341,1920644..1920671,1922300..1922385,1922931..1923044,1923202..1923317,1923413..1923676,1924911..1925042,1927884..1928043,1928179..1928675)
location: region:1879791-1928675:1
so has part: feature:1879791-1879859:1:exon
so has part: feature:1880728-1881051:1:exon
so has part: feature:1897761-1897818:1:exon
so has part: feature:1905829-1906089:1:exon
so has part: feature:1906967-1907027:1:exon
so has part: feature:1911937-1912067:1:exon
so has part: feature:1912615-1912734:1:exon
so has part: feature:1912824-1912937:1:exon
so has part: feature:1913732-1913845:1:exon
so has part: feature:1916901-1916947:1:exon
so has part: feature:1917506-1917679:1:exon
so has part: feature:1917778-1917928:1:exon
so has part: feature:1918057-1918221:1:exon
so has part: feature:1918728-1918841:1:exon
so has part: feature:1919490-1919603:1:exon
so has part: feature:1919951-1920064:1:exon
so has part: feature:1920225-1920341:1:exon
so has part: feature:1920644-1920671:1:exon
so has part: feature:1922300-1922385:1:exon
so has part: feature:1922931-1923044:1:exon
so has part: feature:1923202-1923317:1:exon
so has part: feature:1923413-1923676:1:exon
so has part: feature:1924911-1925042:1:exon
so has part: feature:1927884-1928043:1:exon
so has part: feature:1928179-1928675:1:exon

XP_027134528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1879791-1879859:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1880728-1881051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1897761-1897818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1905829-1906089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1906967-1907027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1911937-1912067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1912615-1912734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1912824-1912937:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1913732-1913845:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1916901-1916947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1917506-1917679:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1917778-1917928:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1918057-1918221:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1918728-1918841:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1919490-1919603:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1919951-1920064:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1920225-1920341:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1920644-1920671:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1922300-1922385:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1922931-1923044:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1923202-1923317:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1923413-1923676:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1924911-1925042:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1927884-1928043:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1928179-1928675:1:exon

LOC109139708
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC109139708
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2053513..2054262)
location: region:2053513-2054262:-1
so has part: feature:2053513-2054262:-1:exon

109139708
type: Gene
SIO_000068: ncbigene

position:2053513:-1
position: 2053513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2054262:-1
position: 2054262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2053513-2054262:-1:exon

LOC109139708
type: Exon
subclass of: SO_0000147
RO_0002162: 215358
gene: LOC109139708
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109139708
subclass of: SO_0000673
so part of: LOC109139708
location: complement(2053513..2054262)
location: region:2053513-2054262:-1
so has part: feature:2053513-2054262:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2053513-2054262:-1:exon

LOC104929859
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: LOC104929859
note: estrogen receptor beta-like; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 2066630..2100466
location: region:2066630-2100466:1
so has part: feature:2066630-2100466:1:exon
subclass of: SO_0000010

104929859
type: Gene
SIO_000068: ncbigene

position:2066630:1
position: 2066630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2100466:1
position: 2100466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2066630-2100466:1:exon

LOC104929859
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104929859
product: estrogen receptor beta-like
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001319934.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 13 substitutions, 2 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001319934.1
SIO_010081: LOC104929859
subclass of: SO_0000673
so part of: LOC104929859
location: join(2066630..2066713,2081970..2082491,2083509..2083708,2083812..2083928,2085242..2085601,2087805..2087943,2093176..2093309,2096124..2096307,2096533..2096871,2098207..2098395)
location: region:2066630-2098395:1
so has part: feature:2066630-2066713:1:exon
so has part: feature:2081970-2082491:1:exon
so has part: feature:2083509-2083708:1:exon
so has part: feature:2083812-2083928:1:exon
so has part: feature:2085242-2085601:1:exon
so has part: feature:2087805-2087943:1:exon
so has part: feature:2093176-2093309:1:exon
so has part: feature:2096124-2096307:1:exon
so has part: feature:2096533-2096871:1:exon
so has part: feature:2098207-2098395:1:exon

position:2098395:1
position: 2098395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2066630-2066713:1:exon

position:2066713:1
position: 2066713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2081970-2082491:1:exon

position:2081970:1
position: 2081970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2082491:1
position: 2082491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2083509-2083708:1:exon

position:2083509:1
position: 2083509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2083708:1
position: 2083708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2083812-2083928:1:exon

position:2083812:1
position: 2083812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2083928:1
position: 2083928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2085242-2085601:1:exon

position:2085242:1
position: 2085242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2085601:1
position: 2085601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2087805-2087943:1:exon

position:2087805:1
position: 2087805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2087943:1
position: 2087943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2093176-2093309:1:exon

position:2093176:1
position: 2093176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2093309:1
position: 2093309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2096124-2096307:1:exon

position:2096124:1
position: 2096124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2096307:1
position: 2096307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2096533-2096871:1:exon

position:2096533:1
position: 2096533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2096871:1
position: 2096871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2098207-2098395:1:exon

position:2098207:1
position: 2098207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104929859
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: LOC104929859
product: estrogen receptor beta-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 204 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_027278683.1
SIO_010081: LOC104929859
subclass of: SO_0000673
so part of: LOC104929859
location: join(2076836..2076889,2081970..2082491,2083509..2083708,2083812..2083928,2085242..2085601,2087805..2087943,2093176..2093309,2096124..2096307,2096533..2096871,2098207..2100466)
location: region:2076836-2100466:1
so has part: feature:2076836-2076889:1:exon
so has part: feature:2081970-2082491:1:exon
so has part: feature:2083509-2083708:1:exon
so has part: feature:2083812-2083928:1:exon
so has part: feature:2085242-2085601:1:exon
so has part: feature:2087805-2087943:1:exon
so has part: feature:2093176-2093309:1:exon
so has part: feature:2096124-2096307:1:exon
so has part: feature:2096533-2096871:1:exon
so has part: feature:2098207-2100466:1:exon

position:2076836:1
position: 2076836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2076836-2076889:1:exon

position:2076889:1
position: 2076889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2081970-2082491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2083509-2083708:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2083812-2083928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2085242-2085601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2087805-2087943:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2093176-2093309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2096124-2096307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2096533-2096871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2098207-2100466:1:exon

LOC104929859
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104929859
inference: similar to AA sequence (same species):RefSeq:NP_001306863.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 6 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
transl except: (pos:2082061..2082063,aa:Met)
product: estrogen receptor beta-like
translation: MASSPGVDPHPLPMLQLQEVGSTKASERPRSPGLLPAVYSPPLGMDSHTVCIPSPYMDSSHEYNHSHGPLTFYSLSVLSYSRPPITDSPSSLCPSLSPSAFWPSHNHPTMPSLTLHCPEPTVYNEPSPHAPWLESKAHSIDASSSIIGSNKSLVKRSEEGVEDMNSSLCSSAIGKADMHFCAVCHDYASGYHYGVWSCEGCKAFFKRCIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMMKCGVRRERCSYRGARHRRGGLQPRDPTGRGLVRVGLGSRAQRHLHLEAPLTPLAPIFQTKHVHLSAMSPEEFISRIMDAEPPEIYLMEDLKKPFTEASMMMSLTNLADKEPVFMISWAKKIPGFVELSLADQINLLKYCWLEILMLGLMWRSVDHPGKLIFSPDFKLNREEGQCVEGIMEIFDMLLAGTSRFRELKLQREEYVCLKAMILLNSNLCTSSPQTAEELESRNKLLRLLDSVIDALVWAISKMGLTTQQQTLRLGHLTMLLSHIRHVSNKGMDHLSTMKRKNVVLVYDLLLEMLDANTSSGSSSSQPSSSPSSETYSDQHQYPQPPSHLHPGSDQTMADHTIVPPHDPAEDPILDGHLDGLPLQSSPPFQSLVVPQMDTNDYIHPEQWSLGTGDAAPSVEPTDYITTNQVVMETALVTQP
SIO_010081: LOC104929859
subclass of: SO_0000673
so part of: LOC104929859
location: join(2082061..2082491,2083509..2083708,2083812..2083928,2085242..2085601,2087805..2087943,2093176..2093309,2096124..2096307,2096533..2096871,2098207..2098327)
location: region:2082061-2098327:1
so has part: feature:2082061-2082491:1:exon
so has part: feature:2083509-2083708:1:exon
so has part: feature:2083812-2083928:1:exon
so has part: feature:2085242-2085601:1:exon
so has part: feature:2087805-2087943:1:exon
so has part: feature:2093176-2093309:1:exon
so has part: feature:2096124-2096307:1:exon
so has part: feature:2096533-2096871:1:exon
so has part: feature:2098207-2098327:1:exon

NP_001306863.1
type: Protein
SIO_000068: ncbiprotein

position:2082061:1
position: 2082061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2098327:1
position: 2098327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2082061-2082491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2083509-2083708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2083812-2083928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2085242-2085601:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2087805-2087943:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2093176-2093309:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2096124-2096307:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2096533-2096871:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2098207-2098327:1:exon

LOC104929859
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215358
gene: LOC104929859
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: estrogen receptor beta-like isoform X1
translation: MLQLQEVGSTKASERPRSPGLLPAVYSPPLGMDSHTVCIPSPYMDSSHEYNHSHGPLTFYSPSVLSYSRPPITDSPSSLCPSLSPSAFWPSHNHPTMPSLTLHCPEPIVYNEPSPHAPWLESKAHSIDASSSIIGSNKSLVKRSEEGVEDMNSSLCSSAIGKADMHFCAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMMKCGVRRERCSYRGARHRRGGLQPRDPTGRGLVRVGLGSRAQRHLHLEAPLTPLAPIFQTKHVHLSAMSPEEFISRIMDAEPPEIYLMEDLKKPFTEASMMMSLTNLADKELVFMISWAKKIPGFVELSLADQINLLKCCWLEILMLGLMWRSVDHPGKLIFSPDFKLNREEGQCVEGIMEIFDMLLAGTSRFRELKLQREEYVCLKAMILLNSNLCTSSPQTAEELESRNKLLRLLDSVIDALVWAISKMGLTTQQQTLRLGHLTMLLSHIRHVSNKGMDHLSTMKRKNVVLVYDLLLEMLDANTSSGSSSSQPSSSPSSETYSDQHQYPQPPSHLHPGSDQTMADHTIVPPHDPAEDPILDGHLDGLPLQSSPPFQSLVVPQMDTNDYIHPEQWSLGTGDAAPSVEPTDYITTNQVVMETALVTQP
SIO_010081: LOC104929859
subclass of: SO_0000673
so part of: LOC104929859
location: join(2082100..2082491,2083509..2083708,2083812..2083928,2085242..2085601,2087805..2087943,2093176..2093309,2096124..2096307,2096533..2096871,2098207..2098327)
location: region:2082100-2098327:1
so has part: feature:2082100-2082491:1:exon
so has part: feature:2083509-2083708:1:exon
so has part: feature:2083812-2083928:1:exon
so has part: feature:2085242-2085601:1:exon
so has part: feature:2087805-2087943:1:exon
so has part: feature:2093176-2093309:1:exon
so has part: feature:2096124-2096307:1:exon
so has part: feature:2096533-2096871:1:exon
so has part: feature:2098207-2098327:1:exon

XP_027134484.1
type: Protein
SIO_000068: ncbiprotein

position:2082100:1
position: 2082100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2082100-2082491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2083509-2083708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2083812-2083928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2085242-2085601:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2087805-2087943:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2093176-2093309:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2096124-2096307:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2096533-2096871:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2098207-2098327:1:exon

syne2
type: Gene
subclass of: SO_0000704
RO_0002162: 215358
gene: syne2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2100375..2175089)
location: region:2100375-2175089:-1
so has part: feature:2100375-2175089:-1:exon
subclass of: SO_0000010

104929860
type: Gene
SIO_000068: ncbigene

position:2100375:-1
position: 2100375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2175089:-1
position: 2175089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2100375-2175089:-1:exon

syne2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: syne2
product: spectrin repeat containing nuclear envelope protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_027278706.1
SIO_010081: syne2
subclass of: SO_0000673
so part of: syne2
location: complement(join(2100375..2101389,2101432..2102536,2102696..2102745,2103495..2103563,2104653..2104847,2105414..2105542,2105635..2105835,2105977..2106188,2107296..2107425,2107540..2107676,2108038..2108106,2108710..2109016,2110087..2110281,2110376..2110513,2111080..2111262,2113140..2113290,2113403..2113590,2117441..2117603,2130467..2130633,2131355..2131513,2134021..2134176,2136072..2136197,2137652..2137846,2139532..2139763,2141099..2141193,2141290..2141437,2142519..2142673,2143178..2143285,2143574..2143756,2143908..2144112,2144202..2144335,2144437..2144607,2144836..2144973,2145118..2145273,2159219..2159395,2159493..2159645,2161254..2161493,2161705..2161843,2161952..2162145,2164894..2165025,2165366..2165539,2165622..2165822,2165946..2166056,2167607..2167801,2168209..2168367,2169136..2169267,2169452..2169563,2169987..2170102,2170481..2170573,2171158..2171376,2174689..2175089))
location: region:2100375-2175089:-1
so has part: feature:2174689-2175089:-1:exon
so has part: feature:2171158-2171376:-1:exon
so has part: feature:2170481-2170573:-1:exon
so has part: feature:2169987-2170102:-1:exon
so has part: feature:2169452-2169563:-1:exon
so has part: feature:2169136-2169267:-1:exon
so has part: feature:2168209-2168367:-1:exon
so has part: feature:2167607-2167801:-1:exon
so has part: feature:2165946-2166056:-1:exon
so has part: feature:2165622-2165822:-1:exon
so has part: feature:2165366-2165539:-1:exon
so has part: feature:2164894-2165025:-1:exon
so has part: feature:2161952-2162145:-1:exon
so has part: feature:2161705-2161843:-1:exon
so has part: feature:2161254-2161493:-1:exon
so has part: feature:2159493-2159645:-1:exon
so has part: feature:2159219-2159395:-1:exon
so has part: feature:2145118-2145273:-1:exon
so has part: feature:2144836-2144973:-1:exon
so has part: feature:2144437-2144607:-1:exon
so has part: feature:2144202-2144335:-1:exon
so has part: feature:2143908-2144112:-1:exon
so has part: feature:2143574-2143756:-1:exon
so has part: feature:2143178-2143285:-1:exon
so has part: feature:2142519-2142673:-1:exon
so has part: feature:2141290-2141437:-1:exon
so has part: feature:2141099-2141193:-1:exon
so has part: feature:2139532-2139763:-1:exon
so has part: feature:2137652-2137846:-1:exon
so has part: feature:2136072-2136197:-1:exon
so has part: feature:2134021-2134176:-1:exon
so has part: feature:2131355-2131513:-1:exon
so has part: feature:2130467-2130633:-1:exon
so has part: feature:2117441-2117603:-1:exon
so has part: feature:2113403-2113590:-1:exon
so has part: feature:2113140-2113290:-1:exon
so has part: feature:2111080-2111262:-1:exon
so has part: feature:2110376-2110513:-1:exon
so has part: feature:2110087-2110281:-1:exon
so has part: feature:2108710-2109016:-1:exon
so has part: feature:2108038-2108106:-1:exon
so has part: feature:2107540-2107676:-1:exon
so has part: feature:2107296-2107425:-1:exon
so has part: feature:2105977-2106188:-1:exon
so has part: feature:2105635-2105835:-1:exon
so has part: feature:2105414-2105542:-1:exon
so has part: feature:2104653-2104847:-1:exon
so has part: feature:2103495-2103563:-1:exon
so has part: feature:2102696-2102745:-1:exon
so has part: feature:2101432-2102536:-1:exon
so has part: feature:2100375-2101389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2174689-2175089:-1:exon

position:2174689:-1
position: 2174689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2171158-2171376:-1:exon

position:2171158:-1
position: 2171158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2171376:-1
position: 2171376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2170481-2170573:-1:exon

position:2170481:-1
position: 2170481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2170573:-1
position: 2170573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2169987-2170102:-1:exon

position:2169987:-1
position: 2169987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2170102:-1
position: 2170102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2169452-2169563:-1:exon

position:2169452:-1
position: 2169452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2169563:-1
position: 2169563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2169136-2169267:-1:exon

position:2169136:-1
position: 2169136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2169267:-1
position: 2169267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2168209-2168367:-1:exon

position:2168209:-1
position: 2168209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2168367:-1
position: 2168367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2167607-2167801:-1:exon

position:2167607:-1
position: 2167607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2167801:-1
position: 2167801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2165946-2166056:-1:exon

position:2165946:-1
position: 2165946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2166056:-1
position: 2166056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2165622-2165822:-1:exon

position:2165622:-1
position: 2165622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2165822:-1
position: 2165822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2165366-2165539:-1:exon

position:2165366:-1
position: 2165366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2165539:-1
position: 2165539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2164894-2165025:-1:exon

position:2164894:-1
position: 2164894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2165025:-1
position: 2165025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2161952-2162145:-1:exon

position:2161952:-1
position: 2161952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2162145:-1
position: 2162145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2161705-2161843:-1:exon

position:2161705:-1
position: 2161705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2161843:-1
position: 2161843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2161254-2161493:-1:exon

position:2161254:-1
position: 2161254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2161493:-1
position: 2161493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2159493-2159645:-1:exon

position:2159493:-1
position: 2159493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2159645:-1
position: 2159645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2159219-2159395:-1:exon

position:2159219:-1
position: 2159219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2159395:-1
position: 2159395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2145118-2145273:-1:exon

position:2145118:-1
position: 2145118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2145273:-1
position: 2145273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2144836-2144973:-1:exon

position:2144836:-1
position: 2144836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2144973:-1
position: 2144973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2144437-2144607:-1:exon

position:2144437:-1
position: 2144437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2144607:-1
position: 2144607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2144202-2144335:-1:exon

position:2144202:-1
position: 2144202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2144335:-1
position: 2144335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2143908-2144112:-1:exon

position:2143908:-1
position: 2143908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2144112:-1
position: 2144112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2143574-2143756:-1:exon

position:2143574:-1
position: 2143574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2143756:-1
position: 2143756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2143178-2143285:-1:exon

position:2143178:-1
position: 2143178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2143285:-1
position: 2143285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2142519-2142673:-1:exon

position:2142519:-1
position: 2142519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2142673:-1
position: 2142673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2141290-2141437:-1:exon

position:2141290:-1
position: 2141290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2141437:-1
position: 2141437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2141099-2141193:-1:exon

position:2141099:-1
position: 2141099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2141193:-1
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SIO_000300: 49
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SIO_000300: 50
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SIO_000300: 51
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syne2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 215358
gene: syne2
product: spectrin repeat containing nuclear envelope protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_027278704.1
SIO_010081: syne2
subclass of: SO_0000673
so part of: syne2
location: complement(join(2100375..2101389,2101432..2102536,2102696..2102745,2103495..2103563,2104653..2104847,2105414..2105542,2105635..2105835,2105977..2106188,2107296..2107425,2107540..2107676,2108710..2109016,2110087..2110281,2110376..2110513,2111080..2111262,2113140..2113290,2113403..2113590,2117441..2117603,2130467..2130633,2131355..2131513,2134021..2134176,2136072..2136197,2137652..2137846,2139532..2139763,2141099..2141193,2141290..2141437,2142519..2142673,2143178..2143285,2143574..2143756,2143908..2144112,2144202..2144335,2144437..2144607,2144836..2144973,2145118..2145273,2159219..2159395,2159493..2159645,2161254..2161493,2161705..2161843,2161952..2162145,2164894..2165025,2165366..2165539,2165622..2165822,2165946..2166056,2167239..2167337,2167607..2167801,2168209..2168367,2169136..2169267,2169452..2169563,2169987..2170102,2170481..2170573,2171158..2171376,2174689..2175089))
location: region:2100375-2175089:-1
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urn:…
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urn:…
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SIO_000628: feature:2167239-2167337:-1:exon

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urn:…
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