Komagataeibacter rhaeticus strain ENS 9a1a plasmid pENS3, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.
Isolation of cellulose-producing strains, genome characterization and application of the synthesized cellulose films as an economical and sustainable material for piezoelectric sensor construction
Submitted (16-MAR-2020) Faculty of Engineering and Natural Sciences, Tampere University, Korkeakoulunkatu 6, Tampere 33720, Finland
REFSEQ INFORMATION: The reference sequence is identical to\nCP050142.1.\nBacteria and source DNA available from Rahul Mangayil, Bio and\nCircular Economy research group, Faculty of Engineering and Natural\nSciences, Tampere University, Tampere, Finland.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2020\nAssembly Method :: SPAdes v. 3.13.0\nAssembly Name :: K. rhaeticus ENS 9a1a\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: Komagataeibacter rhaeticus iGEM\nGenome Coverage :: 400.0x\nSequencing Technology :: Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/25/2023 02:26:49\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,386\nCDSs (total) :: 3,333\nGenes (coding) :: 3,208\nCDSs (with protein) :: 3,208\nGenes (RNA) :: 53\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 4\nPseudo Genes (total) :: 125\nCDSs (without protein) :: 125\nPseudo Genes (ambiguous residues) :: 0 of 125\nPseudo Genes (frameshifted) :: 46 of 125\nPseudo Genes (incomplete) :: 99 of 125\nPseudo Genes (internal stop) :: 10 of 125\nPseudo Genes (multiple problems) :: 27 of 125\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_011424135.1
GO:0004803 - transposase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015075002.1
COORDINATES: similar to AA sequence:RefSeq:WP_019087174.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010512047.1
COORDINATES: similar to AA sequence:RefSeq:WP_007400727.1
GO:0016301 - kinase activity [Evidence IEA]
type II toxin-antitoxin system death-on-curing family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_003620405.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010516858.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012813325.1
COORDINATES: similar to AA sequence:RefSeq:WP_012813326.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003630719.1
COORDINATES: similar to AA sequence:RefSeq:WP_007400720.1
type II toxin-antitoxin system CcdA family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_019087242.1
COORDINATES: similar to AA sequence:RefSeq:WP_010511772.1