Komagataeibacter rhaeticus strain ENS 9a1a plasmid pENS1, complete sequence.
type: Entry
definition: Komagataeibacter rhaeticus strain ENS 9a1a plasmid pENS1, complete sequence.
sequence version: NZ_CP050140.1
sequence date: 2023-03-25
sequence: sequence
division: CON
label: NZ_CP050140.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN13895132
keyword: RefSeq
source: Komagataeibacter rhaeticus
organism: Komagataeibacter rhaeticus
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP050140.1.\nBacteria and source DNA available from Rahul Mangayil, Bio and\nCircular Economy research group, Faculty of Engineering and Natural\nSciences, Tampere University, Tampere, Finland.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2020\nAssembly Method :: SPAdes v. 3.13.0\nAssembly Name :: K. rhaeticus ENS 9a1a\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: Komagataeibacter rhaeticus iGEM\nGenome Coverage :: 400.0x\nSequencing Technology :: Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/25/2023 02:26:49\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,386\nCDSs (total) :: 3,333\nGenes (coding) :: 3,208\nCDSs (with protein) :: 3,208\nGenes (RNA) :: 53\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 4\nPseudo Genes (total) :: 125\nCDSs (without protein) :: 125\nPseudo Genes (ambiguous residues) :: 0 of 125\nPseudo Genes (frameshifted) :: 46 of 125\nPseudo Genes (incomplete) :: 99 of 125\nPseudo Genes (internal stop) :: 10 of 125\nPseudo Genes (multiple problems) :: 27 of 125\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 17785
topology: circular
so has quality: SO_0000988
location: 1..17785
location: region:1-17785:1
RO_0002162: 215221

NZ_CP050140
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN13895132
type: BioSample
SIO_000068: biosample

1
title: Isolation of cellulose-producing strains, genome characterization and application of the synthesized cellulose films as an economical and sustainable material for piezoelectric sensor construction
author: Mangayil, R.K.
journal: Unpublished

2
title: Direct Submission
author: Mangayil, R.K.
journal: Submitted (16-MAR-2020) Faculty of Engineering and Natural Sciences, Tampere University, Korkeakoulunkatu 6, Tampere 33720, Finland

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17785:1
position: 17785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-17785:1:source
so part of: sequence
organism: Komagataeibacter rhaeticus
mol type: genomic DNA
strain: ENS 9a1a
isolation source: SCOBY from Kombucha tea
plasmid: pENS1
country: India: Kodaikanal
lat lon: 11.3530 N 76.7959 E
collection date: 2019-08

215221
type: Taxonomy
SIO_000068: taxonomy

GWK63_RS16735
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16735
old locus tag: GWK63_16735
pseudo: true
so part of: sequence
location: <166..442
location: region:166-442:1
so has part: feature:166-442:1:exon
subclass of: SO_0000010

position:166:1
position: 166
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:442:1
position: 442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166-442:1:exon

GWK63_RS16735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16735
old locus tag: GWK63_16735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007396651.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MucR family transcriptional regulator
SIO_010081: GWK63_RS16735
subclass of: SO_0000673
so part of: GWK63_RS16735
location: <166..442
location: region:166-442:1
so has part: feature:166-442:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:166-442:1:exon

GWK63_RS16740
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16740
old locus tag: GWK63_16740
so part of: sequence
location: complement(477..1082)
location: region:477-1082:-1
so has part: feature:477-1082:-1:exon
subclass of: SO_0000010

position:477:-1
position: 477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082:-1
position: 1082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477-1082:-1:exon

GWK63_RS16740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16740
old locus tag: GWK63_16740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007396654.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTALHTSFVLGYHGCSEEVGRKLINGESAPTPSETDYDWLGPGFYVWESDPLRAQEWAYQKQRRDSGFKPFVIGLVVDLGNCLDLTTREDLEMLKTAYEGLRETLSTDDIPMPVNRDSRHDVNSDKLFRNLDCAVIRYLHDSIEAPESHLAPYDTVRGLFQEGGELYPGSAFREKTHTQIAIRNLDCIKGIFRLPDSSVGI
SIO_010081: GWK63_RS16740
subclass of: SO_0000673
so part of: GWK63_RS16740
location: complement(477..1082)
location: region:477-1082:-1
so has part: feature:477-1082:-1:exon

WP_081749555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477-1082:-1:exon

GWK63_RS16750
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16750
old locus tag: GWK63_16750
so part of: sequence
location: complement(1310..2614)
location: region:1310-2614:-1
so has part: feature:1310-2614:-1:exon
subclass of: SO_0000010

position:1310:-1
position: 1310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2614:-1
position: 2614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310-2614:-1:exon

GWK63_RS16750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16750
old locus tag: GWK63_16750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007396656.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1173 family protein
translation: MTGTIIILPGGERFQLEWRRTDPERWGRRLKAKYDESWSAERSDKARCLCQHRGASLPLQIRYRADSHSYHLAVWPNEGPLHEKTCPFYKPDPEKSGRASYVNSVIREGEDGDVAVTLSIGLRRKGPPRPVDDTPLPASDRPGQARQRRMTPLGLLHLLWERAGLTEWRPQFARHRTPTAALGRIASAGTRIRAQGRLISDLLCPVAPGHEKFGRRFHAIVRTEGKENHLFLIGFVEALEPDPRGNFTMTLSGQRNGYRCFLTVPAAERNRLARSHQLAAATLALPEAARQAHVVALLYVTARNIGTHNSRWRGWIQAEVRTGALMTVSRSMLPFESSHELAVADALVAAGRAFEKPLRFDAERDLVFPDFILQDTARSDGYPMEVFGRTDEAYTTRRAEKENYYDATFGAGGWWSWDATTGSRMPPFPSGRLR
SIO_010081: GWK63_RS16750
subclass of: SO_0000673
so part of: GWK63_RS16750
location: complement(1310..2614)
location: region:1310-2614:-1
so has part: feature:1310-2614:-1:exon

WP_112210239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1310-2614:-1:exon

GWK63_RS16755
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16755
old locus tag: GWK63_16755
so part of: sequence
location: complement(2611..4953)
location: region:2611-4953:-1
so has part: feature:2611-4953:-1:exon
subclass of: SO_0000010

position:2611:-1
position: 2611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4953:-1
position: 4953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2611-4953:-1:exon

GWK63_RS16755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16755
old locus tag: GWK63_16755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010511860.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraM recognition domain-containing protein
translation: MVKREIGGPQVHQQLKHGSTYRDTRPFTVRIAEELQSSSSGFALMILAGLSVLAPAIVGIIFPLALCLTLWVMTRQPVLPFHLPRYSGLKDKHDLDPKTRRPRAAAGIIYLGTDGLTGQQLWLSSDAGRQHAAVPGTTGAGKTTSAISLLANPLAHGSGFILIDGKGDNTVHGDVLALARRFGLDDQVLNLNFLTASGIRQSNTFNPFATGNADAIREMLVSQLGEPSSNDANGVFRDRAVGLAGTIAPVLTWMRDTHGVPINIETMRYAMELRWIGTLARHRVFLIRNPGSDHPIEISVPEIPDDILYPAQAYLGELPGYDSSLAWNEQKENKPSEQHGYAKMYFTRVFTQLGVSLGHIFRAQIPDIDMRDVVLNRRILVVTLPALENSSDTLAGLGKIVVAAGRGVMAQLLGARLDGPAEQVFKLKAGSGDAPFHFFYDELSAYVTDGMDRQLAMGRGLNCMFWLGFQDLPGLTTRIGDKAFTLLGNANLTHAMRLQDAMRTREWIEKQSDRIEVSQATHFEGNSAGSYREGRGAEVREVARIPWADLQSLIEGEAITMYAGRIVHSKTFFAAVNGRSGAIRMAQPVMLAAPLDLNRVPPDQQLLALLATIEGGLFQSELTTVHDEPDVRALEEAVDRLGSGSQDILRNFAQIGAAVAAAPRRVATANDDEENEHAAGTDMLTPFSYMLRDAASIPKPGFRTPPRTIPPIDGHLLGRLEAIERRVDRQPGVARRQALLLLGVRDAMTKGAPKEGAASTGMTEKEILAQIRILREKTSA
SIO_010081: GWK63_RS16755
subclass of: SO_0000673
so part of: GWK63_RS16755
location: complement(2611..4953)
location: region:2611-4953:-1
so has part: feature:2611-4953:-1:exon

WP_112210241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2611-4953:-1:exon

GWK63_RS16760
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16760
old locus tag: GWK63_16760
so part of: sequence
location: complement(4957..5562)
location: region:4957-5562:-1
so has part: feature:4957-5562:-1:exon
subclass of: SO_0000010

position:4957:-1
position: 4957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5562:-1
position: 5562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4957-5562:-1:exon

GWK63_RS16760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16760
old locus tag: GWK63_16760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019091461.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRIILHADGRAPITIELDGTGLQPLHFHLGSDFGHTETNDAAATLPEAAAARRWRLKKALPALIAGGLAAILIIGTRQAMVSDRAVPDTGPTGMLRPPAILPPLSGAPMTDEGAPGVRSTYVPGARMPVDGNVVGNPDGHPASAEIDAARRIMAQRPVITYPQPPGSAQTAPTAPVSPTAPTAPVAPTIDTGKSPFGLED
SIO_010081: GWK63_RS16760
subclass of: SO_0000673
so part of: GWK63_RS16760
location: complement(4957..5562)
location: region:4957-5562:-1
so has part: feature:4957-5562:-1:exon

WP_112210243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4957-5562:-1:exon

GWK63_RS16765
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16765
old locus tag: GWK63_16765
so part of: sequence
location: complement(5573..6718)
location: region:5573-6718:-1
so has part: feature:5573-6718:-1:exon
subclass of: SO_0000010

position:5573:-1
position: 5573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6718:-1
position: 6718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5573-6718:-1:exon

GWK63_RS16765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16765
old locus tag: GWK63_16765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007396659.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTNRVPWSSSDDYLLFSSIIIIVGVLLFSYMAWSLWHTQITAVYLWAMLGQINLLHTSNPDLMRLQVQLQAAQYRPDLVRAIQLYYGLAILGNALKWPVAIVIALLGGLCMWRAAPGRFAKALDLEGLIAVQAEMFPTLKGFVRRRLDRLVTPTDGIPLPADPALTRAEWGARFAVDAQGRYSETGALEAFTRQLGRHWSSINAASPVEQVLLVAFAMHYLQRRREALALLGELSAGLADAGLDGPHGPLAPLTVPESVMRSARSALQDKEITNCIDTVCERSGWSVTALMTLLHEARRQAGVLAPSSFAIVKLIDRSLWYALHSLGFPAEIPAEDLHPNPRIEAAGARAHWSEERRYQRPIYIPAVENALAILRPMPEA
SIO_010081: GWK63_RS16765
subclass of: SO_0000673
so part of: GWK63_RS16765
location: complement(5573..6718)
location: region:5573-6718:-1
so has part: feature:5573-6718:-1:exon

WP_112210244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5573-6718:-1:exon

GWK63_RS16770
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16770
old locus tag: GWK63_16770
so part of: sequence
location: complement(6715..7224)
location: region:6715-7224:-1
so has part: feature:6715-7224:-1:exon
subclass of: SO_0000010

position:6715:-1
position: 6715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7224:-1
position: 7224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6715-7224:-1:exon

GWK63_RS16770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16770
old locus tag: GWK63_16770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007396660.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MILRLALAALGAFPLFVASTTARATSIEENGRQIAACLEASAKISGVPRGVLLVLLYVEAGRPGMVSPNGNGTADLGPMQVNTTWVDRIARRWHSTPAQTYAALRDSSCANIEAGAWILGQAMHEAHGDLWQAVAFYHSHTPRHGNAYLRRFYDIALTMMARNRRDDRS
SIO_010081: GWK63_RS16770
subclass of: SO_0000673
so part of: GWK63_RS16770
location: complement(6715..7224)
location: region:6715-7224:-1
so has part: feature:6715-7224:-1:exon

WP_007396178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6715-7224:-1:exon

GWK63_RS16775
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16775
old locus tag: GWK63_16775
so part of: sequence
location: complement(7221..7643)
location: region:7221-7643:-1
so has part: feature:7221-7643:-1:exon
subclass of: SO_0000010

position:7221:-1
position: 7221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7643:-1
position: 7643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7221-7643:-1:exon

GWK63_RS16775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16775
old locus tag: GWK63_16775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010511856.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAIDLAAISAAQTRLLAEIGKPIELLDRGTGKRVVVSPADAAHPEAYLPVFLISAEALWLELTGTGFALDVSRTPDSALGYAVRKVRAGSFTVVMLCLIDVTMRLAEMDDALVLNHLIDFWGEAHGRIADVAPTLQGAT
SIO_010081: GWK63_RS16775
subclass of: SO_0000673
so part of: GWK63_RS16775
location: complement(7221..7643)
location: region:7221-7643:-1
so has part: feature:7221-7643:-1:exon

WP_039998253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7221-7643:-1:exon

GWK63_RS16780
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
gene: icmT
locus tag: GWK63_RS16780
old locus tag: GWK63_16780
so part of: sequence
location: complement(7640..7888)
location: region:7640-7888:-1
so has part: feature:7640-7888:-1:exon
subclass of: SO_0000010

position:7640:-1
position: 7640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7888:-1
position: 7888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7640-7888:-1:exon

GWK63_RS16780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
gene: icmT
locus tag: GWK63_RS16780
old locus tag: GWK63_16780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010517045.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IcmT/TraK family protein
translation: MWRATAYPVRVFILDARSCFPILISVTHWSLTTLLIGVFGVVFFGTISFFGLTLPAAIRSMRRFLIGPVRTALPTWQRRRFS
SIO_010081: GWK63_RS16780
subclass of: SO_0000673
so part of: GWK63_RS16780
location: complement(7640..7888)
location: region:7640-7888:-1
so has part: feature:7640-7888:-1:exon

WP_010511855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7640-7888:-1:exon

GWK63_RS16785
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16785
old locus tag: GWK63_16785
so part of: sequence
location: complement(7888..9051)
location: region:7888-9051:-1
so has part: feature:7888-9051:-1:exon
subclass of: SO_0000010

position:9051:-1
position: 9051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7888-9051:-1:exon

GWK63_RS16785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16785
old locus tag: GWK63_16785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014106815.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase, T2SS/T4P/T4SS family
translation: MNITIPVTTDERWPDEGRKAFAWVEERRRNAPGLDSLLRWAHGLGASRIDIKTGHPVTIKVHGVIRYATCKATDSLALADIVGHVYASDGMAMLGVGHILDTAYSVALDRKVNLRFRINLSPISVKRGSGVHIVMRPIPARPASLDQQMVEQEIRDTNRLKSGMVLFGGATGSGKTTLQFGLAIEKLMDPTVYCDMATGEEPIEFLLDDLRPPSGSRISQTEIRPPTLTFPTFTRSLTRREMSDGIITECRDGETMNAAINIAMMGGILGTTLHADSVSLMIQRAIALCPPSERDNLVSALAQALRFCINQRLVPRKGGGRVAIREFLTFDRDLRRKLTRTEPTDWPDVVADAVEAQGQSFGKAIRKLLDADLITEDTALAEERRDA
SIO_010081: GWK63_RS16785
subclass of: SO_0000673
so part of: GWK63_RS16785
location: complement(7888..9051)
location: region:7888-9051:-1
so has part: feature:7888-9051:-1:exon

WP_007396180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7888-9051:-1:exon

GWK63_RS16790
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16790
old locus tag: GWK63_16790
so part of: sequence
location: complement(9048..10088)
location: region:9048-10088:-1
so has part: feature:9048-10088:-1:exon
subclass of: SO_0000010

position:9048:-1
position: 9048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10088:-1
position: 10088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9048-10088:-1:exon

GWK63_RS16790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16790
old locus tag: GWK63_16790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010515528.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MRKMALFLSSAIVVTAAGSPTHAASVSTGKVVIEEGQHVRLPTSSPSPPSARSGTLVPEPQPPQPGADQVDGADPALANPINKPVTGASTLDEVVGGEAPPSLEALENTRPNDEPGGDLKPGRSAQLREAAHIYGAQGGLAARAFAINEMLRRHEETLDATYDFRSIVLPIGSGQTLMQPPIVTEAQMAFALNDTGQVAHETECVFEITREAQLTSAPPDWRTYLVRTWGKPHHRVAAALPRTKAEVSHWNQWVAEGWADGEKQATEIFLSDLSRLQRDITGMARYRVLLNAGRVEEPRVVFEHQDAVGGGDTLHLNDRTIRIASQPGLQGHVRRGSDYGYPEHCR
SIO_010081: GWK63_RS16790
subclass of: SO_0000673
so part of: GWK63_RS16790
location: complement(9048..10088)
location: region:9048-10088:-1
so has part: feature:9048-10088:-1:exon

WP_112210245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9048-10088:-1:exon

GWK63_RS16795
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16795
old locus tag: GWK63_16795
so part of: sequence
location: complement(10081..10539)
location: region:10081-10539:-1
so has part: feature:10081-10539:-1:exon
subclass of: SO_0000010

position:10081:-1
position: 10081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10539:-1
position: 10539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10081-10539:-1:exon

GWK63_RS16795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16795
old locus tag: GWK63_16795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010515529.1
note: Members of this family include DotD of type IVB secretion systems and TraH of plasmid conjugative plasmid systems, both lipoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DotD/TraH family lipoprotein
translation: MKHSLLIFLLPMALNACAQSLSSPSPIATTGMANPELALQRSIAETTTDLRELGSIRPSPVVASANQPLLPDDLTRRIWFVWDGPLGKAVAKLGQEIGYSVTVTGHPRAMRVATNSVAAVVDILRTLGDQAGDQAMVSVDPLHHAITVAWHA
SIO_010081: GWK63_RS16795
subclass of: SO_0000673
so part of: GWK63_RS16795
location: complement(10081..10539)
location: region:10081-10539:-1
so has part: feature:10081-10539:-1:exon

WP_157998275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10081-10539:-1:exon

GWK63_RS16800
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16800
old locus tag: GWK63_16800
so part of: sequence
location: 10760..11416
location: region:10760-11416:1
so has part: feature:10760-11416:1:exon
subclass of: SO_0000010

position:10760:1
position: 10760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11416:1
position: 11416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10760-11416:1:exon

GWK63_RS16800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16800
old locus tag: GWK63_16800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010512310.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF433 domain-containing protein
translation: MIEIQPVTLREAQFLIGMSEKDINRAIDRGEVEKISEPEEDMPVHGVGKGRRRVRKIGLSELLFLALEKQMHADLTPTGRRKLYQAFKKNEAKARTVSFGPFKANITEIQRNFLSKYKKLLDAKKNILEEDGADPVIKGTGISAYRVAALAQGQTIKEIKADYPTLTEEQIESAIAYTEAYPKPGRPYPVRSFRRAAGALAEMGIFDAIETGAESAKE
SIO_010081: GWK63_RS16800
subclass of: SO_0000673
so part of: GWK63_RS16800
location: 10760..11416
location: region:10760-11416:1
so has part: feature:10760-11416:1:exon

WP_039998255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10760-11416:1:exon

GWK63_RS16805
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16805
old locus tag: GWK63_16805
so part of: sequence
location: complement(11419..12057)
location: region:11419-12057:-1
so has part: feature:11419-12057:-1:exon
subclass of: SO_0000010

position:11419:-1
position: 11419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12057:-1
position: 12057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11419-12057:-1:exon

GWK63_RS16805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16805
old locus tag: GWK63_16805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004211657.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RES family NAD+ phosphorylase
translation: MPRPPPDLNALVKKTIWSADKTIHRIHPETYGANTFNPGPRGNARFSPIIDANGISIPTIYGGTTLECAAMETVFHDVPHEPGLKTVAKRKLKNHQYSQLQSSTDLTLADLSSTALRKLGIPRVDLIETDKDIYPQTRKWAEAIHAQCPDVQGLEWVSRQDDRARAIILFGDRLPPDPLSSIAPSVDIVENEDTYAALVELAETIGVQITGK
SIO_010081: GWK63_RS16805
subclass of: SO_0000673
so part of: GWK63_RS16805
location: complement(11419..12057)
location: region:11419-12057:-1
so has part: feature:11419-12057:-1:exon

WP_223846730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11419-12057:-1:exon

GWK63_RS16810
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16810
old locus tag: GWK63_16810
so part of: sequence
location: complement(12197..12880)
location: region:12197-12880:-1
so has part: feature:12197-12880:-1:exon
subclass of: SO_0000010

position:12197:-1
position: 12197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12880:-1
position: 12880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12197-12880:-1:exon

GWK63_RS16810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16810
old locus tag: GWK63_16810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019091453.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVAVQNREITNTGIKPITGSVREIRDSLQDTDNNQFVVFQLAHANKSTASAFAEAVRLIAPLIIDRLAIHKTATLKKLVDALVPAASPPEHLITEARMNADARQTVLESAEWISAVQLSEIAGFKGQNASAQPNKWKREGKVFALRHDGNDLYPAYALDRDMQYRPIKGLVPILKVFKGKLDAWDIAIWFASANSFLGGTAPKDLLKSAPERVLAAAEDEIAGVLHG
SIO_010081: GWK63_RS16810
subclass of: SO_0000673
so part of: GWK63_RS16810
location: complement(12197..12880)
location: region:12197-12880:-1
so has part: feature:12197-12880:-1:exon

WP_007396187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12197-12880:-1:exon

GWK63_RS16815
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16815
old locus tag: GWK63_16815
so part of: sequence
location: 13312..13689
location: region:13312-13689:1
so has part: feature:13312-13689:1:exon
subclass of: SO_0000010

position:13312:1
position: 13312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13689:1
position: 13689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13312-13689:1:exon

GWK63_RS16815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16815
old locus tag: GWK63_16815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012763398.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MGSPKSRLALEQLGHDLRGARLRRGMAIADLAVRTGTSASSVARLEKGDPGVGIGTLADVLVVLGLLDRLADLIDIRKDDLGLALAAERQPRRGRTSATTLRRRQDKDKAAHGRTDVIDLDGASF
SIO_010081: GWK63_RS16815
subclass of: SO_0000673
so part of: GWK63_RS16815
location: 13312..13689
location: region:13312-13689:1
so has part: feature:13312-13689:1:exon

WP_039998257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13312-13689:1:exon

GWK63_RS16820
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16820
old locus tag: GWK63_16820
so part of: sequence
location: 13689..14912
location: region:13689-14912:1
so has part: feature:13689-14912:1:exon
subclass of: SO_0000010

position:14912:1
position: 14912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13689-14912:1:exon

GWK63_RS16820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16820
old locus tag: GWK63_16820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010515531.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HipA family toxin
translation: MPDFSAHVVLGDSLTPVGQLRFTQVGPRQFSTFTYDPAWVENSRAFAIQPTFPLGSGPFHAAGQPGNVRDALAGVFADAAPDSWGRRLLERAYGNGLSEFEYLTLSDDVCRQGALRFADDNGEIIRRGADDTIPRLVDLAAITAIARAYEQGKDVSARDMQALAGAGGARPKANVRDGDVLWLAKFTSVHDQWPIERIEVATLRLARACGIRTPEVRLELAETPFPVALIQRFDRRGPGRIPYISARTALGKTGTELGSYTEIVDFIRTYAADPQAEFRELFLRLVYTILVSNKDDHLKNHGFLYVDAGHWRLSPVFDVNPAPDRNPHLETAILEGGPHDRSIHLALEACEFFEITPAEARQMIRVTAQRISDEWRPVLREVGVSGAMARHYEAAFINDQIGIALTI
SIO_010081: GWK63_RS16820
subclass of: SO_0000673
so part of: GWK63_RS16820
location: 13689..14912
location: region:13689-14912:1
so has part: feature:13689-14912:1:exon

WP_007396190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13689-14912:1:exon

GWK63_RS16730
type: Gene
subclass of: SO_0000704
RO_0002162: 215221
locus tag: GWK63_RS16730
old locus tag: GWK63_16730
so part of: sequence
location: complement(15080..17704)
location: region:15080-17704:-1
so has part: feature:15080-17704:-1:exon
subclass of: SO_0000010

position:15080:-1
position: 15080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17704:-1
position: 17704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15080-17704:-1:exon

GWK63_RS16730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 215221
locus tag: GWK63_RS16730
old locus tag: GWK63_16730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MAEERRTLASQFSRVGNTQRFALRSDIMAARHESFISRVQAALQGFDISCEFLGPHQALQVAREATYRETAGSAWKPTLLGDRVMPRLPDDLDDPQPHPQGLLWPAIRDQIFNADAETKGGQLVTVGDYTYAPVDMTIGPEDPRPFSELSSVLGRKRLPWRSAMILEGGGRAAFGFKEAGAGFLAMFPGNSDIRRAFAALKLERQKNNHNSVRMRMTATTWAPVGAEAKLRRQASDLSQAIDAWGNSKTTRISGDPLEAAMGSVPALALGSTATSSLALVGDAFSMMPWARSASPWQRGSILFRKPDGSIWPYDPTGGGLRPSVVDIIVAPPGGGKSVLANTILLGLILSSAAISSHGTKLPYIGKLDIGPSSRGLIEMLRNALGPERQHEAVYVKMQAIPGFEVNVFDTQVGLEYPLPLERVFLQNFISLLATPLDGRPWEGMDHLVEDVIDEAYRLCTGVQGGTPKIYTPGIEPDVDAAITSLGISLPHHAGEDDPTWWRDVVDGFVNLREYRLAGFAQRHAVPVLQDLLIAARSPEIEKRYSKITLETGESLIDTFDRYIMNVIKNFPMLASPTRLDMGDARVIVLDLAEVAPSGSPAANRQTALMYMLGRHILARNFFLHPDYADDPHMPPSMRDYHLARFTEMYETTKRVDFDEWHRTEPAPQVDKQAVRDGREGRKHNVQLAFISQNHTDFSEDLYKISTARWVLKCGDQETADSLIRRFKLSDASAYVIRNALPGPGKNGAPFFVDMSAGEAKYEQLLVNVLGPIELWSFSTTPGDTALRSRLYKRIHFARALRMLATVFPSGTANSEIERRKSERMNVFGLATDEAFAGVLDELADEIVGGRGVAAGLYETLRAIDEQSELEFTTG
SIO_010081: GWK63_RS16730
subclass of: SO_0000673
so part of: GWK63_RS16730
location: complement(15080..17704)
location: region:15080-17704:-1
so has part: feature:15080-17704:-1:exon

WP_240919174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15080-17704:-1:exon