Perognathus longimembris pacificus isolate PPM17 chromosome 27, ASM2315922v1, whole genome shotgun sequence.
type: Entry
definition: Perognathus longimembris pacificus isolate PPM17 chromosome 27, ASM2315922v1, whole genome shotgun sequence.
sequence version: NC_063187.1
sequence date: 2022-05-19
sequence: sequence
division: CON
label: NC_063187.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA837248
dblink: SAMN26876106
keyword: WGS
keyword: RefSeq
source: Perognathus longimembris pacificus (Pacific pocket mouse)
organism: Perognathus longimembris pacificus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Perognathinae; Perognathus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM041290.1.\nAssembly name: ASM2315922v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the San Diego Zoo Wildlife\nAlliance on 2022/04/27. The original whole-genome shotgun project\nhas the accession JALGBO000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: San Diego Zoo Wildlife Alliance\nAssembly Date :: 2021\nAssembly Method :: Peregrine v. JUNE-2020; HiRise v.\n JULY-2020; Juicer v. DECEMBER-2020;\n Juicebox Assembly Tools v. DECEMBER-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 23.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Perognathus longimembris pacificus\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 8832447
topology: linear
so has quality: SO_0000987
location: 1..8832447
location: region:1-8832447:1
RO_0002162: 214514

NC_063187
type: RefSeq
SIO_000068: refseq

PRJNA837248
type: BioProject
SIO_000068: bioproject

SAMN26876106
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8832447:1
position: 8832447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-8832447:1:source
so part of: sequence
organism: Perognathus longimembris pacificus
mol type: genomic DNA
isolate: PPM17
sub species: pacificus
chromosome: 27
sex: male
cell line: 21356
cell type: fibroblast
tissue type: trachea
dev stage: adult
country: USA: Santa Margarita
collection date: 2019
collected by: SDZWA

214514
type: Taxonomy
SIO_000068: taxonomy

LOC125342852
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(40409..41815)
location: region:40409-41815:-1
so has part: feature:40409-41815:-1:exon

125342852
type: Gene
SIO_000068: ncbigene

position:40409:-1
position: 40409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41815:-1
position: 41815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40409-41815:-1:exon

LOC125342852
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342852
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC125342852
subclass of: SO_0000673
so part of: LOC125342852
location: complement(40409..40758)
location: region:40409-40758:-1
so has part: feature:40409-40758:-1:exon

position:40758:-1
position: 40758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40409-40758:-1:exon

LOC125342852
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342852
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC125342852
subclass of: SO_0000673
so part of: LOC125342852
location: complement(40995..41815)
location: region:40995-41815:-1
so has part: feature:40995-41815:-1:exon

position:40995:-1
position: 40995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40995-41815:-1:exon

LOC125342723
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342723
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(285870..287570)
location: region:285870-287570:-1
so has part: feature:285870-287570:-1:exon
subclass of: SO_0000010

125342723
type: Gene
SIO_000068: ncbigene

position:285870:-1
position: 285870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287570:-1
position: 287570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285870-287570:-1:exon

LOC125342723
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342723
product: sperm motility kinase Z-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_048335039.1
SIO_010081: LOC125342723
subclass of: SO_0000673
so part of: LOC125342723
location: complement(285870..287570)
location: region:285870-287570:-1
so has part: feature:285870-287570:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285870-287570:-1:exon

LOC125342723
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342723
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm motility kinase Z-like
translation: MEPVPFEYMSYSVLLEKSFSDQYETYEIIRGGSYGVVVKAYHRLLERVVAVKMLEKEGNLSLVENEVDIVKNIHHPHVIRMYQVIQGERYVHLVLELATNGDLLSWLTELRRCLYEDEARRFLKQIASAIVYLHQNRIAHRDLKPDNILLDEKGNAKVGDLGLSVRIAPGQLLTEKCGAFIFRAPELYLQEEYDGFKVDLWGLGTILFFMVTGKFPFKMTTYQQLSAQIINGLYEIPFYLTSKGLSILLKLLTVDPKQRPDIQQIMTHPWFDRVEEGSLYPHEPLPDDLDPTITTVMCIMGYPEPQIRHSVLQRAFDEVMAIYCMIKDGLKGETVSPVKIQPVPLYPTHTNLCAFPPQRRASLPTQLHSLLLPSERTPTCMEPQLERGKSSSLPPLALLPSTSSGTTSTPFQPDLVGAADCCSCLPTREGLEQQTPKETPELQPQADPQVENRAPRGVKSESQGCKGPGIEPRRYAWYGSEELSEEAIHLARRHHHVVFQASSPKIPGCCCFRRQGKKSQVTGQPQDDHRDSRSRRELGRTGVFGRIVAALCRLCCCLRCQGQSRD
SIO_010081: LOC125342723
subclass of: SO_0000673
so part of: LOC125342723
location: complement(285870..287570)
location: region:285870-287570:-1
so has part: feature:285870-287570:-1:exon

XP_048190996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285870-287570:-1:exon

LOC125342862
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342862
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(441368..441978)
location: region:441368-441978:-1
so has part: feature:441368-441978:-1:exon
subclass of: SO_0000010

125342862
type: Gene
SIO_000068: ncbigene

position:441368:-1
position: 441368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441978:-1
position: 441978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441368-441978:-1:exon

LOC125342862
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342862
product: high mobility group protein B2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335177.1
SIO_010081: LOC125342862
subclass of: SO_0000673
so part of: LOC125342862
location: complement(441368..441978)
location: region:441368-441978:-1
so has part: feature:441368-441978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441368-441978:-1:exon

LOC125342862
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342862
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group protein B2-like
translation: MGKGNLSKPRVKMSSYAFFVQTCWEKHKKKHPNSLVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSGKARYDREMKNYVPPKGGKGKKKDPNAPKRPPSSFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQTAAKLEEKYEKDIAAYRAKDKSEAGK
SIO_010081: LOC125342862
subclass of: SO_0000673
so part of: LOC125342862
location: complement(441463..441978)
location: region:441463-441978:-1
so has part: feature:441463-441978:-1:exon

XP_048191134.1
type: Protein
SIO_000068: ncbiprotein

position:441463:-1
position: 441463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441463-441978:-1:exon

LOC125342725
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 489514..490450
location: region:489514-490450:1
so has part: feature:489514-490450:1:exon

125342725
type: Gene
SIO_000068: ncbigene

position:489514:1
position: 489514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490450:1
position: 490450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489514-490450:1:exon

LOC125342725
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342725
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342725
subclass of: SO_0000673
so part of: LOC125342725
location: 489514..490450
location: region:489514-490450:1
so has part: feature:489514-490450:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489514-490450:1:exon

LOC125342726
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342726
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 580726..647806
location: region:580726-647806:1
so has part: feature:580726-647806:1:exon

125342726
type: Gene
SIO_000068: ncbigene

position:580726:1
position: 580726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647806:1
position: 647806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580726-647806:1:exon

LOC125342726
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342726
subclass of: SO_0000673
so part of: LOC125342726
location: 580726..580869
location: region:580726-580869:1
so has part: feature:580726-580869:1:exon

position:580869:1
position: 580869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580726-580869:1:exon

LOC125342726
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342726
subclass of: SO_0000673
so part of: LOC125342726
location: 632005..632168
location: region:632005-632168:1
so has part: feature:632005-632168:1:exon

position:632005:1
position: 632005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632168:1
position: 632168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632005-632168:1:exon

LOC125342726
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342726
subclass of: SO_0000673
so part of: LOC125342726
location: 632569..632647
location: region:632569-632647:1
so has part: feature:632569-632647:1:exon

position:632569:1
position: 632569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632647:1
position: 632647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632569-632647:1:exon

LOC125342726
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342726
subclass of: SO_0000673
so part of: LOC125342726
location: 634307..634358
location: region:634307-634358:1
so has part: feature:634307-634358:1:exon

position:634307:1
position: 634307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634358:1
position: 634358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634307-634358:1:exon

LOC125342726
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342726
subclass of: SO_0000673
so part of: LOC125342726
location: 637743..637773
location: region:637743-637773:1
so has part: feature:637743-637773:1:exon

position:637743:1
position: 637743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637773:1
position: 637773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637743-637773:1:exon

LOC125342726
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342726
subclass of: SO_0000673
so part of: LOC125342726
location: 639831..640116
location: region:639831-640116:1
so has part: feature:639831-640116:1:exon

position:639831:1
position: 639831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640116:1
position: 640116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639831-640116:1:exon

LOC125342726
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342726
subclass of: SO_0000673
so part of: LOC125342726
location: 641262..641446
location: region:641262-641446:1
so has part: feature:641262-641446:1:exon

position:641262:1
position: 641262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641446:1
position: 641446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641262-641446:1:exon

LOC125342726
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342726
subclass of: SO_0000673
so part of: LOC125342726
location: 641540..642056
location: region:641540-642056:1
so has part: feature:641540-642056:1:exon

position:641540:1
position: 641540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642056:1
position: 642056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641540-642056:1:exon

LOC125342726
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342726
subclass of: SO_0000673
so part of: LOC125342726
location: 642986..643213
location: region:642986-643213:1
so has part: feature:642986-643213:1:exon

position:642986:1
position: 642986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643213:1
position: 643213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642986-643213:1:exon

LOC125342726
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342726
subclass of: SO_0000673
so part of: LOC125342726
location: 645919..646042
location: region:645919-646042:1
so has part: feature:645919-646042:1:exon

position:645919:1
position: 645919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646042:1
position: 646042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645919-646042:1:exon

LOC125342726
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342726
subclass of: SO_0000673
so part of: LOC125342726
location: 646884..647806
location: region:646884-647806:1
so has part: feature:646884-647806:1:exon

position:646884:1
position: 646884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646884-647806:1:exon

Kras
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Kras
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 740520..781380
location: region:740520-781380:1
so has part: feature:740520-781380:1:exon
subclass of: SO_0000010

125342925
type: Gene
SIO_000068: ncbigene

position:740520:1
position: 740520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781380:1
position: 781380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740520-781380:1:exon

Kras
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Kras
product: KRAS proto-oncogene, GTPase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048335268.1
SIO_010081: Kras
subclass of: SO_0000673
so part of: Kras
location: join(740520..740672,745009..745130,766481..766659,768252..768411,775942..776065,780893..781017)
location: region:740520-781017:1
so has part: feature:740520-740672:1:exon
so has part: feature:745009-745130:1:exon
so has part: feature:766481-766659:1:exon
so has part: feature:768252-768411:1:exon
so has part: feature:775942-776065:1:exon
so has part: feature:780893-781017:1:exon

position:781017:1
position: 781017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740520-740672:1:exon

position:740672:1
position: 740672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:745009-745130:1:exon

position:745009:1
position: 745009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745130:1
position: 745130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:766481-766659:1:exon

position:766481:1
position: 766481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766659:1
position: 766659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:768252-768411:1:exon

position:768252:1
position: 768252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768411:1
position: 768411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:775942-776065:1:exon

position:775942:1
position: 775942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776065:1
position: 776065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:780893-781017:1:exon

position:780893:1
position: 780893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Kras
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Kras
product: KRAS proto-oncogene, GTPase, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048335269.1
SIO_010081: Kras
subclass of: SO_0000673
so part of: Kras
location: join(740545..740672,745009..745130,766481..766659,768252..768411,775942..776057,776722,780893..781380)
location: region:740545-781380:1
so has part: feature:740545-740672:1:exon
so has part: feature:745009-745130:1:exon
so has part: feature:766481-766659:1:exon
so has part: feature:768252-768411:1:exon
so has part: feature:775942-776057:1:exon
so has part: feature:776722-776722:1:exon
so has part: feature:780893-781380:1:exon

position:740545:1
position: 740545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740545-740672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745009-745130:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:766481-766659:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:768252-768411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:775942-776057:1:exon

position:776057:1
position: 776057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:776722-776722:1:exon

position:776722:1
position: 776722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:780893-781380:1:exon

Kras
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Kras
product: KRAS proto-oncogene, GTPase, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048335267.1
SIO_010081: Kras
subclass of: SO_0000673
so part of: Kras
location: join(740545..740672,745009..745130,766481..766659,768252..768411,780893..781380)
location: region:740545-781380:1
so has part: feature:740545-740672:1:exon
so has part: feature:745009-745130:1:exon
so has part: feature:766481-766659:1:exon
so has part: feature:768252-768411:1:exon
so has part: feature:780893-781380:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:740545-740672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745009-745130:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:766481-766659:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:768252-768411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780893-781380:1:exon

Kras
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Kras
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase KRas isoform X3
translation: MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKLSKEEETPGCVKIKKCVIMGVDDAFYTLVREIRKHKEKMSKDGKKKKKKSKTKCIIM
SIO_010081: Kras
subclass of: SO_0000673
so part of: Kras
location: join(745020..745130,766481..766659,768252..768411,775942..776057,776722,780893..781009)
location: region:745020-781009:1
so has part: feature:745020-745130:1:exon
so has part: feature:766481-766659:1:exon
so has part: feature:768252-768411:1:exon
so has part: feature:775942-776057:1:exon
so has part: feature:776722-776722:1:exon
so has part: feature:780893-781009:1:exon

XP_048191226.1
type: Protein
SIO_000068: ncbiprotein

position:745020:1
position: 745020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781009:1
position: 781009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745020-745130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:766481-766659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:768252-768411:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775942-776057:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776722-776722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:780893-781009:1:exon

Kras
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Kras
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase KRas isoform X1
translation: MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHKEKMSKDGKKKKKKSKTKCIIM
SIO_010081: Kras
subclass of: SO_0000673
so part of: Kras
location: join(745020..745130,766481..766659,768252..768411,780893..781009)
location: region:745020-781009:1
so has part: feature:745020-745130:1:exon
so has part: feature:766481-766659:1:exon
so has part: feature:768252-768411:1:exon
so has part: feature:780893-781009:1:exon

XP_048191224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:745020-745130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:766481-766659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:768252-768411:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:780893-781009:1:exon

Kras
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Kras
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase KRas isoform X2
translation: MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKLSKEEETPGCVKIKKCVIM
SIO_010081: Kras
subclass of: SO_0000673
so part of: Kras
location: join(745020..745130,766481..766659,768252..768411,775942..776061)
location: region:745020-776061:1
so has part: feature:745020-745130:1:exon
so has part: feature:766481-766659:1:exon
so has part: feature:768252-768411:1:exon
so has part: feature:775942-776061:1:exon

XP_048191225.1
type: Protein
SIO_000068: ncbiprotein

position:776061:1
position: 776061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745020-745130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:766481-766659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:768252-768411:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775942-776061:1:exon

Etfrf1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Etfrf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(785126..792767)
location: region:785126-792767:-1
so has part: feature:785126-792767:-1:exon
subclass of: SO_0000010

125342927
type: Gene
SIO_000068: ncbigene

position:785126:-1
position: 785126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792767:-1
position: 792767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785126-792767:-1:exon

Etfrf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Etfrf1
product: electron transfer flavoprotein regulatory factor 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048335270.1
SIO_010081: Etfrf1
subclass of: SO_0000673
so part of: Etfrf1
location: complement(join(785126..786114,786203..786291,792625..792767))
location: region:785126-792767:-1
so has part: feature:792625-792767:-1:exon
so has part: feature:786203-786291:-1:exon
so has part: feature:785126-786114:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:792625-792767:-1:exon

position:792625:-1
position: 792625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:786203-786291:-1:exon

position:786203:-1
position: 786203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786291:-1
position: 786291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:785126-786114:-1:exon

position:786114:-1
position: 786114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Etfrf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Etfrf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein regulatory factor 1
translation: MKMANSLRGEVLNLYKNLLFLGRDYPKGADYFRRRLKNVFLKNKDVKDPEKIKELIKRGEFVMKELEALYFLRKYRAMKQRYYSDTRVN
SIO_010081: Etfrf1
subclass of: SO_0000673
so part of: Etfrf1
location: complement(join(785896..786114,786203..786253))
location: region:785896-786253:-1
so has part: feature:786203-786253:-1:exon
so has part: feature:785896-786114:-1:exon

XP_048191227.1
type: Protein
SIO_000068: ncbiprotein

position:785896:-1
position: 785896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786253:-1
position: 786253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786203-786253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:785896-786114:-1:exon

Dnai7
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Dnai7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 796176..821935
location: region:796176-821935:1
so has part: feature:796176-821935:1:exon
subclass of: SO_0000010

125342928
type: Gene
SIO_000068: ncbigene

position:796176:1
position: 796176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821935:1
position: 821935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:796176-821935:1:exon

Dnai7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Dnai7
product: dynein axonemal intermediate chain 7
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335271.1
SIO_010081: Dnai7
subclass of: SO_0000673
so part of: Dnai7
location: join(796176..796263,796613..796704,799816..799917,800899..801037,802338..802484,804483..804586,805723..806022,809951..810026,811523..811683,814556..814712,816824..817038,818042..818209,819953..820066,821663..821935)
location: region:796176-821935:1
so has part: feature:796176-796263:1:exon
so has part: feature:796613-796704:1:exon
so has part: feature:799816-799917:1:exon
so has part: feature:800899-801037:1:exon
so has part: feature:802338-802484:1:exon
so has part: feature:804483-804586:1:exon
so has part: feature:805723-806022:1:exon
so has part: feature:809951-810026:1:exon
so has part: feature:811523-811683:1:exon
so has part: feature:814556-814712:1:exon
so has part: feature:816824-817038:1:exon
so has part: feature:818042-818209:1:exon
so has part: feature:819953-820066:1:exon
so has part: feature:821663-821935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:796176-796263:1:exon

position:796263:1
position: 796263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:796613-796704:1:exon

position:796613:1
position: 796613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796704:1
position: 796704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:799816-799917:1:exon

position:799816:1
position: 799816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799917:1
position: 799917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:800899-801037:1:exon

position:800899:1
position: 800899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801037:1
position: 801037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:802338-802484:1:exon

position:802338:1
position: 802338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802484:1
position: 802484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:804483-804586:1:exon

position:804483:1
position: 804483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804586:1
position: 804586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:805723-806022:1:exon

position:805723:1
position: 805723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806022:1
position: 806022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:809951-810026:1:exon

position:809951:1
position: 809951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810026:1
position: 810026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:811523-811683:1:exon

position:811523:1
position: 811523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811683:1
position: 811683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:814556-814712:1:exon

position:814556:1
position: 814556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814712:1
position: 814712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:816824-817038:1:exon

position:816824:1
position: 816824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817038:1
position: 817038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:818042-818209:1:exon

position:818042:1
position: 818042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818209:1
position: 818209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:819953-820066:1:exon

position:819953:1
position: 819953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820066:1
position: 820066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:821663-821935:1:exon

position:821663:1
position: 821663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Dnai7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Dnai7
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: dynein axonemal intermediate chain 7
translation: MGQEKKKKLTRAERLRLQQEEEERRLKEEEEARLKLEKEEQERLERQRIAEEKWHQLEEKDLERRNQELGELYLLELCFPEAEKLKQEIRSLSRWKHYIACDGNPDPSESQEMNTFISLWREELNETFETVIEKSKLVLYLIEKMKLILLETPRCDLGSKATMHYKGSIHELQEVLHLKFNIATELLLRQASNLADLDSGNMEKVIKDENINLYLWANLKKNPRHRSVRFSQTRMGFEIPRILATSDIALRLLHTRYDHITPVLPVLSPQERNXTVPKPGKGEPTAPETDEQENRDGENQESEFMLTQDEEQENKDQVKVEVQMIPVNEDSEVPQYELEMQLLSDKVLEAQKFLVEDAPEKPEVSDMYDLDLCQFMMVGGVFHLDILQLPPLCKPAKGWMMVEILKGGLQNFTYPPENMEELDPENTFPPIEVILEIPENVVFFEDPMVVRWDLEGQRWKTDGISNVSYMEEDKLLLFSLETPGPFALVQDAHANMPYLSWELTPLNLNQVLLTVTTLFTEFQIQVKENVCMLSSIKLKDPRPVSSLEGKWMAPIPFITALKKAGLNIFPTQYSRFYVTGNKKLSLVEIRAYRQMALLSSAFAFSWSKWNSVCNYKKVIFKVREQLTVEPARPPWDLLMFSGDRAQKLKLTEESDVFSETVEEGTEFHSSLYHMVQDFASPEAMERIRKSTSQYVDSVCHLLLSTRIISFS
SIO_010081: Dnai7
subclass of: SO_0000673
so part of: Dnai7
location: join(796176..796263,796613..796704,799816..799917,800899..801037,802338..802484,804483..804586,805723..806022,809951..810026,811523..811683,814556..814712,816824..817038,818042..818209,819953..820066,821663..821935)
location: region:796176-821935:1
so has part: feature:796176-796263:1:exon
so has part: feature:796613-796704:1:exon
so has part: feature:799816-799917:1:exon
so has part: feature:800899-801037:1:exon
so has part: feature:802338-802484:1:exon
so has part: feature:804483-804586:1:exon
so has part: feature:805723-806022:1:exon
so has part: feature:809951-810026:1:exon
so has part: feature:811523-811683:1:exon
so has part: feature:814556-814712:1:exon
so has part: feature:816824-817038:1:exon
so has part: feature:818042-818209:1:exon
so has part: feature:819953-820066:1:exon
so has part: feature:821663-821935:1:exon

XP_048191228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:796176-796263:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:796613-796704:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:799816-799917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:800899-801037:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:802338-802484:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:804483-804586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805723-806022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:809951-810026:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:811523-811683:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:814556-814712:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:816824-817038:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:818042-818209:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:819953-820066:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:821663-821935:1:exon

Irag2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Irag2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(822328..867261)
location: region:822328-867261:-1
so has part: feature:822328-867261:-1:exon
subclass of: SO_0000010

125342727
type: Gene
SIO_000068: ncbigene

position:822328:-1
position: 822328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867261:-1
position: 867261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822328-867261:-1:exon

Irag2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Irag2
product: inositol 1,4,5-triphosphate receptor associated 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335040.1
SIO_010081: Irag2
subclass of: SO_0000673
so part of: Irag2
location: complement(join(822328..822574,824328..824435,826602..826703,826976..827025,827134..827196,829121..829164,830297..830444,835577..835711,838918..839058,839846..839873,839960..840023,840953..841010,841904..842062,843504..843649,843789..843853,843962..844008,857960..858064,860525..860607,867009..867261))
location: region:822328-867261:-1
so has part: feature:867009-867261:-1:exon
so has part: feature:860525-860607:-1:exon
so has part: feature:857960-858064:-1:exon
so has part: feature:843962-844008:-1:exon
so has part: feature:843789-843853:-1:exon
so has part: feature:843504-843649:-1:exon
so has part: feature:841904-842062:-1:exon
so has part: feature:840953-841010:-1:exon
so has part: feature:839960-840023:-1:exon
so has part: feature:839846-839873:-1:exon
so has part: feature:838918-839058:-1:exon
so has part: feature:835577-835711:-1:exon
so has part: feature:830297-830444:-1:exon
so has part: feature:829121-829164:-1:exon
so has part: feature:827134-827196:-1:exon
so has part: feature:826976-827025:-1:exon
so has part: feature:826602-826703:-1:exon
so has part: feature:824328-824435:-1:exon
so has part: feature:822328-822574:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867009-867261:-1:exon

position:867009:-1
position: 867009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:860525-860607:-1:exon

position:860525:-1
position: 860525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860607:-1
position: 860607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:857960-858064:-1:exon

position:857960:-1
position: 857960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858064:-1
position: 858064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:843962-844008:-1:exon

position:843962:-1
position: 843962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844008:-1
position: 844008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:843789-843853:-1:exon

position:843789:-1
position: 843789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843853:-1
position: 843853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:843504-843649:-1:exon

position:843504:-1
position: 843504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843649:-1
position: 843649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:841904-842062:-1:exon

position:841904:-1
position: 841904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842062:-1
position: 842062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:840953-841010:-1:exon

position:840953:-1
position: 840953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841010:-1
position: 841010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:839960-840023:-1:exon

position:839960:-1
position: 839960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840023:-1
position: 840023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:839846-839873:-1:exon

position:839846:-1
position: 839846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839873:-1
position: 839873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:838918-839058:-1:exon

position:838918:-1
position: 838918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839058:-1
position: 839058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:835577-835711:-1:exon

position:835577:-1
position: 835577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835711:-1
position: 835711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:830297-830444:-1:exon

position:830297:-1
position: 830297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830444:-1
position: 830444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:829121-829164:-1:exon

position:829121:-1
position: 829121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829164:-1
position: 829164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:827134-827196:-1:exon

position:827134:-1
position: 827134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827196:-1
position: 827196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:826976-827025:-1:exon

position:826976:-1
position: 826976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827025:-1
position: 827025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:826602-826703:-1:exon

position:826602:-1
position: 826602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826703:-1
position: 826703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:824328-824435:-1:exon

position:824328:-1
position: 824328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824435:-1
position: 824435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:822328-822574:-1:exon

position:822574:-1
position: 822574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Irag2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Irag2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol 1,4,5-triphosphate receptor associated 2
translation: MNGDRRMDENGIEPSGADSSPAIRDNLSLADPGNTEPTENTVISTDSRQDILHMASSDLDCKSVCEEEEGGKSMPTMASEYCRGRVQSFPDTRPADPLSLGHGLHCCPLFPVLSPLVILFPLMAGPNPAEKPAGQETETKTEAVPPLDTQEEPPTVEEHGKEGATGDTKVSSAPVTTVKSVNFRQSDNPSANEKEVEAEFLRLSLGFKCDWFTLEKRMKLEERSRDLAEENLKKEILHCLKLIESLIPLCEEDNQAQEIIKKLEKSIAFLSQCATRAAGRAEMLGAINQESRVSKAVEVMIQHVENLKRMYAKEHAELEELKLVLTQNERPLNSLEDDDDCQIKKRSASLNSKPSSLRRGTIASLPRNLGSAGMVAGLDSYDRFSRRASSWRVLGSKQSEHRPSLHRFISTYSWADAEEERHELKTQDDSEPPGEETVERTRKPSLSEKKNTPSKWDMSSFSAPVASWAAHIRTAVGKGNKALWLSGTFLVLSAALMSFLAGWFLQGPVEAAPTQGGDPWGSLEHILWPLARLQPRGPPPV
SIO_010081: Irag2
subclass of: SO_0000673
so part of: Irag2
location: complement(join(822331..822574,824328..824435,826602..826703,826976..827025,827134..827196,829121..829164,830297..830444,835577..835711,838918..839058,839846..839873,839960..840023,840953..841010,841904..842062,843504..843649,843789..843853,843962..844008,857960..857983))
location: region:822331-857983:-1
so has part: feature:857960-857983:-1:exon
so has part: feature:843962-844008:-1:exon
so has part: feature:843789-843853:-1:exon
so has part: feature:843504-843649:-1:exon
so has part: feature:841904-842062:-1:exon
so has part: feature:840953-841010:-1:exon
so has part: feature:839960-840023:-1:exon
so has part: feature:839846-839873:-1:exon
so has part: feature:838918-839058:-1:exon
so has part: feature:835577-835711:-1:exon
so has part: feature:830297-830444:-1:exon
so has part: feature:829121-829164:-1:exon
so has part: feature:827134-827196:-1:exon
so has part: feature:826976-827025:-1:exon
so has part: feature:826602-826703:-1:exon
so has part: feature:824328-824435:-1:exon
so has part: feature:822331-822574:-1:exon

XP_048190997.1
type: Protein
SIO_000068: ncbiprotein

position:822331:-1
position: 822331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857983:-1
position: 857983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857960-857983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843962-844008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:843789-843853:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:843504-843649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:841904-842062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:840953-841010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:839960-840023:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:839846-839873:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:838918-839058:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:835577-835711:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:830297-830444:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829121-829164:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:827134-827196:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:826976-827025:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:826602-826703:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:824328-824435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:822331-822574:-1:exon

St8sia1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: St8sia1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(892536..934537)
location: region:892536-934537:-1
so has part: feature:892536-934537:-1:exon
subclass of: SO_0000010

125342728
type: Gene
SIO_000068: ncbigene

position:892536:-1
position: 892536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934537:-1
position: 934537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892536-934537:-1:exon

St8sia1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: St8sia1
product: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048335042.1
SIO_010081: St8sia1
subclass of: SO_0000673
so part of: St8sia1
location: complement(join(892536..893022,900107..900199,902128..902237,915585..915728,934347..934537))
location: region:892536-934537:-1
so has part: feature:934347-934537:-1:exon
so has part: feature:915585-915728:-1:exon
so has part: feature:902128-902237:-1:exon
so has part: feature:900107-900199:-1:exon
so has part: feature:892536-893022:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934347-934537:-1:exon

position:934347:-1
position: 934347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:915585-915728:-1:exon

position:915585:-1
position: 915585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915728:-1
position: 915728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:902128-902237:-1:exon

position:902128:-1
position: 902128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902237:-1
position: 902237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:900107-900199:-1:exon

position:900107:-1
position: 900107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900199:-1
position: 900199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:892536-893022:-1:exon

position:893022:-1
position: 893022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

St8sia1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: St8sia1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: alpha-N-acetylneuraminide alpha-2,8-sialyltransferase
translation: MAARGWRLARTRLPVGASALCALLLCGLYVLPAGRPPRDQDIIRAVLRRGAAWARNRTAARLFRKQMEDCCDPAHXFAMTKLNSPMGKSMWYDGEFLYSFTIDNSTYSLFPQATPFQLPLKKCAVVGNGGILKKSSCGRQIDEANFIMRCNLPPLSSEYTKDVGSKTHLVTANPSIIRQRFENLLWSRKSFVESMKIYKHSYIYMPAFSMKTGTEPSLRVYYTLTDVGANQTVLFANPNFLRSIGKFWKNRGIHAKRLSTGLFLVSAALGLCEEVAIYGFWPFSVDTHEQSISHHYYDNVLPFSGFHAMPEEFLQLWFLHKIGALKMQLDPCEMPSLQPSP
SIO_010081: St8sia1
subclass of: SO_0000673
so part of: St8sia1
location: complement(join(892536..893022,900107..900199,902128..902237,915585..915728,934347..934537))
location: region:892536-934537:-1
so has part: feature:934347-934537:-1:exon
so has part: feature:915585-915728:-1:exon
so has part: feature:902128-902237:-1:exon
so has part: feature:900107-900199:-1:exon
so has part: feature:892536-893022:-1:exon

XP_048190999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:934347-934537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:915585-915728:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:902128-902237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:900107-900199:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:892536-893022:-1:exon

C2cd5
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: C2cd5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(947316..1021721)
location: region:947316-1021721:-1
so has part: feature:947316-1021721:-1:exon
subclass of: SO_0000010

125342840
type: Gene
SIO_000068: ncbigene

position:947316:-1
position: 947316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021721:-1
position: 1021721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947316-1021721:-1:exon

C2cd5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: C2cd5
product: C2 calcium dependent domain containing 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048335149.1
SIO_010081: C2cd5
subclass of: SO_0000673
so part of: C2cd5
location: complement(join(947316..947838,949136..949282,950146..950348,960801..960887,963830..963917,965674..965763,966584..966682,966944..967005,967427..967490,970173..970313,971288..971452,973817..974003,974687..974878,976817..976912,977876..977990,990460..990568,997280..997356,1005414..1005562,1011231..1011429,1012723..1012878,1013869..1013964,1016637..1016808,1017433..1017519,1021551..1021721))
location: region:947316-1021721:-1
so has part: feature:1021551-1021721:-1:exon
so has part: feature:1017433-1017519:-1:exon
so has part: feature:1016637-1016808:-1:exon
so has part: feature:1013869-1013964:-1:exon
so has part: feature:1012723-1012878:-1:exon
so has part: feature:1011231-1011429:-1:exon
so has part: feature:1005414-1005562:-1:exon
so has part: feature:997280-997356:-1:exon
so has part: feature:990460-990568:-1:exon
so has part: feature:977876-977990:-1:exon
so has part: feature:976817-976912:-1:exon
so has part: feature:974687-974878:-1:exon
so has part: feature:973817-974003:-1:exon
so has part: feature:971288-971452:-1:exon
so has part: feature:970173-970313:-1:exon
so has part: feature:967427-967490:-1:exon
so has part: feature:966944-967005:-1:exon
so has part: feature:966584-966682:-1:exon
so has part: feature:965674-965763:-1:exon
so has part: feature:963830-963917:-1:exon
so has part: feature:960801-960887:-1:exon
so has part: feature:950146-950348:-1:exon
so has part: feature:949136-949282:-1:exon
so has part: feature:947316-947838:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1021551-1021721:-1:exon

position:1021551:-1
position: 1021551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1017433-1017519:-1:exon

position:1017433:-1
position: 1017433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017519:-1
position: 1017519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1016637-1016808:-1:exon

position:1016637:-1
position: 1016637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016808:-1
position: 1016808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1013869-1013964:-1:exon

position:1013869:-1
position: 1013869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013964:-1
position: 1013964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1012723-1012878:-1:exon

position:1012723:-1
position: 1012723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012878:-1
position: 1012878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1011231-1011429:-1:exon

position:1011231:-1
position: 1011231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011429:-1
position: 1011429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1005414-1005562:-1:exon

position:1005414:-1
position: 1005414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005562:-1
position: 1005562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:997280-997356:-1:exon

position:997280:-1
position: 997280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997356:-1
position: 997356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:990460-990568:-1:exon

position:990460:-1
position: 990460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990568:-1
position: 990568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:977876-977990:-1:exon

position:977876:-1
position: 977876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977990:-1
position: 977990
reference: sequence
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C2cd5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: C2cd5
product: C2 calcium dependent domain containing 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048335148.1
SIO_010081: C2cd5
subclass of: SO_0000673
so part of: C2cd5
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C2cd5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: C2cd5
product: C2 calcium dependent domain containing 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335150.1
SIO_010081: C2cd5
subclass of: SO_0000673
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C2cd5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: C2cd5
product: C2 calcium dependent domain containing 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335152.1
SIO_010081: C2cd5
subclass of: SO_0000673
so part of: C2cd5
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location: region:947316-1021721:-1
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C2cd5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: C2cd5
product: C2 calcium dependent domain containing 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335151.1
SIO_010081: C2cd5
subclass of: SO_0000673
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SIO_000300: 11
SIO_000628: feature:976817-976912:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:974687-974878:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:973817-974003:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:971288-971452:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:970173-970313:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:967427-967490:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:966944-967005:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:966584-966682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:965674-965763:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:963830-963917:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:960801-960887:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:951752-951853:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:950146-950348:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:949136-949282:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:947316-947838:-1:exon

C2cd5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: C2cd5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C2 domain-containing protein 5 isoform X2
translation: MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPHWNSEWFKFEVDDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRGEINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVVIHGFVEELVVNEDPEYQWIDRIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIGTACTLDKLTNPATFLPACHSPSKEMKEIPFSEDPKPNAHSSGPSTPLRNHTYSFSPSKSYSRQSSSDTDLSLTPKTGMGSAGKEGPFKALLRQQTQSALEQREFPFFTLTAFPPGFLLHVGGVVSARSVKLLDRIHNPDEPETRDAWWAEIRQEIKSHAKALGCHAVVGYSESTSICEEVCILSASGTAAMLNPRFLQDGIVEGCLEQRLGESQPPGCGFCHTPYDEVNTPFPAHLALCCCCRRQKVPDVLLTTIDLPAQATVVGKGCLIQARLCRLKKKAQAETNATAISNLLPFMEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMVMGLASATGVYLAALPMPGGIQIAGKTPSDGSYEQHVSHMQKKINDTIAKNKELYEISPPEVVEEIIGSPIPEPRQRSRLLRSQSESSDEATELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDVPPPAGFYSCNTEIMPGINNWTSEIQMFTSVRVIRLSSLNLTNQVLNKNFNDLCENLLKSLYFKLRSMIPCCLCHVNFTVSLPEDELIQVTVTAVAITFDKNQALQTTNTQAEKSLQRASSDNEELLQFPLELCSDSLPSHSFPTVKAAAVDKASAGGEGAARARAPPPCPGSSAGSSVSVVRMTPLSFIPGARITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQAQCLINVSGDAVVFVRESDVEAMSAQQPLALYQPLGSGPEVPT
SIO_010081: C2cd5
subclass of: SO_0000673
so part of: C2cd5
location: complement(join(947707..947838,949136..949282,950146..950348,960801..960887,963830..963917,965674..965763,966584..966682,966944..967005,967427..967490,970173..970313,971288..971452,973817..974003,974687..974878,976817..976912,977876..977990,990460..990568,997280..997356,1005414..1005562,1011231..1011429,1012723..1012878,1013869..1013964,1016637..1016808,1017433..1017519,1021551..1021640))
location: region:947707-1021640:-1
so has part: feature:1021551-1021640:-1:exon
so has part: feature:1017433-1017519:-1:exon
so has part: feature:1016637-1016808:-1:exon
so has part: feature:1013869-1013964:-1:exon
so has part: feature:1012723-1012878:-1:exon
so has part: feature:1011231-1011429:-1:exon
so has part: feature:1005414-1005562:-1:exon
so has part: feature:997280-997356:-1:exon
so has part: feature:990460-990568:-1:exon
so has part: feature:977876-977990:-1:exon
so has part: feature:976817-976912:-1:exon
so has part: feature:974687-974878:-1:exon
so has part: feature:973817-974003:-1:exon
so has part: feature:971288-971452:-1:exon
so has part: feature:970173-970313:-1:exon
so has part: feature:967427-967490:-1:exon
so has part: feature:966944-967005:-1:exon
so has part: feature:966584-966682:-1:exon
so has part: feature:965674-965763:-1:exon
so has part: feature:963830-963917:-1:exon
so has part: feature:960801-960887:-1:exon
so has part: feature:950146-950348:-1:exon
so has part: feature:949136-949282:-1:exon
so has part: feature:947707-947838:-1:exon

XP_048191106.1
type: Protein
SIO_000068: ncbiprotein

position:947707:-1
position: 947707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021640:-1
position: 1021640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021551-1021640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1017433-1017519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1016637-1016808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013869-1013964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1012723-1012878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1011231-1011429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1005414-1005562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:997280-997356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:990460-990568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:977876-977990:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:976817-976912:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:974687-974878:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:973817-974003:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:971288-971452:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:970173-970313:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:967427-967490:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:966944-967005:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:966584-966682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:965674-965763:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:963830-963917:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:960801-960887:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:950146-950348:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:949136-949282:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:947707-947838:-1:exon

C2cd5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: C2cd5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C2 domain-containing protein 5 isoform X1
translation: MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPHWNSEWFKFEVDDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRGEINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVVIHGFVEELVVNEDPEYQWIDRIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIGTACTLDKLTNPATFLPACHSPSKEMKEIPFSEDPKPNAHSSGPSTPLRNHTYSFSPSKSYSRQSSSDTDLSLTPKTGMGSAGKEGPFKALLRQQTQSALEQREFPFFTLTAFPPGFLLHVGGVVSARSVKLLDRIHNPDEPETRDAWWAEIRQEIKSHAKALGCHAVVGYSESTSICEEVCILSASGTAAMLNPRFLQDGIVEGCLEQRLGESQPPGCGFCHTPYDEVNTPFPAHLALCCCCRRQKVPDVLLTTIDLPAQATVVGKGCLIQARLCRLKKKAQAETNATAISNLLPFMEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMVMGLASATGVYLAALPMPGGIQIAGKTPSDGSYEQHVSHMQKKINDTIAKNKELYEISPPEVVEEIIGSPIPEPRQRSRLLRSQSESSDEATELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDVPPPAGFYSCNTEIMPGINNWTSEIQMFTSVRVIRLSSLNLTNQVLNKNFNDLCENLLKSLYFKLRSMIPCCLCHVNFTVSLPEDELIQVTVTAVAITFDKNQALQTTNTQAEKSLQRASSDNEELLQFPLELCSDSLPSHSFPTVKATSVDYSSFADRCGSWIELIKLKAQSIRRGSMKTTAAVDKASAGGEGAARARAPPPCPGSSAGSSVSVVRMTPLSFIPGARITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQAQCLINVSGDAVVFVRESDVEAMSAQQPLALYQPLGSGPEVPT
SIO_010081: C2cd5
subclass of: SO_0000673
so part of: C2cd5
location: complement(join(947707..947838,949136..949282,950146..950348,951752..951853,960801..960887,963830..963917,965674..965763,966584..966682,966944..967005,967427..967490,970173..970313,971288..971452,973817..974003,974687..974878,976817..976912,977876..977990,990460..990568,997280..997356,1005414..1005562,1011231..1011429,1012723..1012878,1013869..1013964,1016637..1016808,1017433..1017519,1021551..1021640))
location: region:947707-1021640:-1
so has part: feature:1021551-1021640:-1:exon
so has part: feature:1017433-1017519:-1:exon
so has part: feature:1016637-1016808:-1:exon
so has part: feature:1013869-1013964:-1:exon
so has part: feature:1012723-1012878:-1:exon
so has part: feature:1011231-1011429:-1:exon
so has part: feature:1005414-1005562:-1:exon
so has part: feature:997280-997356:-1:exon
so has part: feature:990460-990568:-1:exon
so has part: feature:977876-977990:-1:exon
so has part: feature:976817-976912:-1:exon
so has part: feature:974687-974878:-1:exon
so has part: feature:973817-974003:-1:exon
so has part: feature:971288-971452:-1:exon
so has part: feature:970173-970313:-1:exon
so has part: feature:967427-967490:-1:exon
so has part: feature:966944-967005:-1:exon
so has part: feature:966584-966682:-1:exon
so has part: feature:965674-965763:-1:exon
so has part: feature:963830-963917:-1:exon
so has part: feature:960801-960887:-1:exon
so has part: feature:951752-951853:-1:exon
so has part: feature:950146-950348:-1:exon
so has part: feature:949136-949282:-1:exon
so has part: feature:947707-947838:-1:exon

XP_048191105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1021551-1021640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1017433-1017519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1016637-1016808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013869-1013964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1012723-1012878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1011231-1011429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1005414-1005562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:997280-997356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:990460-990568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:977876-977990:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:976817-976912:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:974687-974878:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:973817-974003:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:971288-971452:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:970173-970313:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:967427-967490:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:966944-967005:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:966584-966682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:965674-965763:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:963830-963917:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:960801-960887:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:951752-951853:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:950146-950348:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:949136-949282:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:947707-947838:-1:exon

C2cd5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: C2cd5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C2 domain-containing protein 5 isoform X3
translation: MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPHWNSEWFKFEVDDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRGEINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVVIHGFVEELVVNEDPEYQWIDRIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIGTACTLDKLTNPATFLPACHSPSKEMKEIPFSEDPKPNAHSSGPSTPLRNHTYSFSPSKSYSRQSSSDTDLSLTPKTAPNPQGPGICLSPSSPLLSCESFHLRQPCLLSGPSLRPHPPPVCPILRKSVSFSDELFLSASGMGSAGKEGPFKALLRQQTQSALEQREFPFFTLTAFPPGFLLHVGGVVSARSVKLLDRIHNPDEPETRDAWWAEIRQEIKSHAKALGCHAVVGYSESTSICEEVCILSASGTAAMLNPRFLQDGIVEGCLEQRLGESQPPGCGFCHTPYDEVNTPFPAHLALCCCCRRQKVPDVLLTTIDLPAQATVVGKGCLIQARLCRLKKKAQAETNATAISNLLPFMEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMVMGLASATGVYLAALPMPGGIQIAGKTPSDGSYEQHVSHMQKKINDTIAKNKELYEISPPEVVEEIIGSPIPEPRQRSRLLRSQSESSDEATELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDVPPPAGFYSCNTEIMPGINNWTSEIQMFTSVRVIRLSSLNLTNQVLNKNFNDLCENLLKSLYFKLRSMIPCCLCHVNFTVSLPEDELIQVTVTAVAITFDKNQALQTTNTQAEKSLQRASSDNEELLQFPLELCSDSLPSHSFPTVKATSVDYSSFADRCGSWIELIKLKAQSIRRGSMKTTAAVDKASAGGEGAARARAPPPCPGSSAGSSVSVVRMTPLSFIPGARITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQAQCLINVSGDAVVFVRESDVEAMSAQQPLALYQPLGSGPEVPT
SIO_010081: C2cd5
subclass of: SO_0000673
so part of: C2cd5
location: complement(join(947707..947838,949136..949282,950146..950348,951752..951853,960801..960887,963830..963917,965674..965763,966584..966682,966944..967005,967427..967490,970173..970313,971288..971452,973817..974003,974687..974878,976817..976912,977876..977990,990460..990568,997280..997356,998948..999133,1005414..1005562,1011231..1011429,1012723..1012878,1013869..1013964,1016637..1016808,1017433..1017519,1021551..1021640))
location: region:947707-1021640:-1
so has part: feature:1021551-1021640:-1:exon
so has part: feature:1017433-1017519:-1:exon
so has part: feature:1016637-1016808:-1:exon
so has part: feature:1013869-1013964:-1:exon
so has part: feature:1012723-1012878:-1:exon
so has part: feature:1011231-1011429:-1:exon
so has part: feature:1005414-1005562:-1:exon
so has part: feature:998948-999133:-1:exon
so has part: feature:997280-997356:-1:exon
so has part: feature:990460-990568:-1:exon
so has part: feature:977876-977990:-1:exon
so has part: feature:976817-976912:-1:exon
so has part: feature:974687-974878:-1:exon
so has part: feature:973817-974003:-1:exon
so has part: feature:971288-971452:-1:exon
so has part: feature:970173-970313:-1:exon
so has part: feature:967427-967490:-1:exon
so has part: feature:966944-967005:-1:exon
so has part: feature:966584-966682:-1:exon
so has part: feature:965674-965763:-1:exon
so has part: feature:963830-963917:-1:exon
so has part: feature:960801-960887:-1:exon
so has part: feature:951752-951853:-1:exon
so has part: feature:950146-950348:-1:exon
so has part: feature:949136-949282:-1:exon
so has part: feature:947707-947838:-1:exon

XP_048191107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1021551-1021640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1017433-1017519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1016637-1016808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013869-1013964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1012723-1012878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1011231-1011429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1005414-1005562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:998948-999133:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:997280-997356:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:990460-990568:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:977876-977990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:976817-976912:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:974687-974878:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:973817-974003:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:971288-971452:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:970173-970313:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:967427-967490:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:966944-967005:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:966584-966682:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:965674-965763:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:963830-963917:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:960801-960887:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:951752-951853:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:950146-950348:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:949136-949282:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:947707-947838:-1:exon

C2cd5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: C2cd5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C2 domain-containing protein 5 isoform X5
translation: MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPHWNSEWFKFEVDDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRGEINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVVIHGFVEELVVNEDPEYQWIDRIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIGTACTLDKLTNPATFLPACHSPSKEMKESPLAHPANNHGCRSTHNSPIHTTTGSRLTQNLSVSVPTLIYTGMGSAGKEGPFKALLRQQTQSALEQREFPFFTLTAFPPGFLLHVGGVVSARSVKLLDRIHNPDEPETRDAWWAEIRQEIKSHAKALGCHAVVGYSESTSICEEVCILSASGTAAMLNPRFLQDGIVEGCLEQRLGESQPPGCGFCHTPYDEVNTPFPAHLALCCCCRRQKVPDVLLTTIDLPAQATVVGKGCLIQARLCRLKKKAQAETNATAISNLLPFMEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMVMGLASATGVYLAALPMPGGIQIAGKTPSDGSYEQHVSHMQKKINDTIAKNKELYEISPPEVVEEIIGSPIPEPRQRSRLLRSQSESSDEATELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDVPPPAGFYSCNTEIMPGINNWTSEIQMFTSVRVIRLSSLNLTNQVLNKNFNDLCENLLKSLYFKLRSMIPCCLCHVNFTVSLPEDELIQVTVTAVAITFDKNQALQTTNTQAEKSLQRASSDNEELLQFPLELCSDSLPSHSFPTVKAAAVDKASAGGEGAARARAPPPCPGSSAGSSVSVVRMTPLSFIPGARITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQAQCLINVSGDAVVFVRESDVEAMSAQQPLALYQPLGSGPEVPT
SIO_010081: C2cd5
subclass of: SO_0000673
so part of: C2cd5
location: complement(join(947707..947838,949136..949282,950146..950348,960801..960887,963830..963917,965674..965763,966584..966682,966944..967005,967427..967490,970173..970313,971288..971452,973817..974003,974687..974878,976817..976912,977876..977990,990460..990568,997280..997356,1006629..1006756,1011231..1011429,1012723..1012878,1013869..1013964,1016637..1016808,1017433..1017519,1021551..1021640))
location: region:947707-1021640:-1
so has part: feature:1021551-1021640:-1:exon
so has part: feature:1017433-1017519:-1:exon
so has part: feature:1016637-1016808:-1:exon
so has part: feature:1013869-1013964:-1:exon
so has part: feature:1012723-1012878:-1:exon
so has part: feature:1011231-1011429:-1:exon
so has part: feature:1006629-1006756:-1:exon
so has part: feature:997280-997356:-1:exon
so has part: feature:990460-990568:-1:exon
so has part: feature:977876-977990:-1:exon
so has part: feature:976817-976912:-1:exon
so has part: feature:974687-974878:-1:exon
so has part: feature:973817-974003:-1:exon
so has part: feature:971288-971452:-1:exon
so has part: feature:970173-970313:-1:exon
so has part: feature:967427-967490:-1:exon
so has part: feature:966944-967005:-1:exon
so has part: feature:966584-966682:-1:exon
so has part: feature:965674-965763:-1:exon
so has part: feature:963830-963917:-1:exon
so has part: feature:960801-960887:-1:exon
so has part: feature:950146-950348:-1:exon
so has part: feature:949136-949282:-1:exon
so has part: feature:947707-947838:-1:exon

XP_048191109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1021551-1021640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1017433-1017519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1016637-1016808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013869-1013964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1012723-1012878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1011231-1011429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1006629-1006756:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:997280-997356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:990460-990568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:977876-977990:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:976817-976912:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:974687-974878:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:973817-974003:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:971288-971452:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:970173-970313:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:967427-967490:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:966944-967005:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:966584-966682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:965674-965763:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:963830-963917:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:960801-960887:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:950146-950348:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:949136-949282:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:947707-947838:-1:exon

C2cd5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: C2cd5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C2 domain-containing protein 5 isoform X4
translation: MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPHWNSEWFKFEVDDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRGEINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVVIHGFVEELVVNEDPEYQWIDRIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIGTACTLDKLTNPATFLPACHSPSKEMKESPLAHPANNHGCRSTHNSPIHTTTGSRLTQNLSVSVPTLIYTGMGSAGKEGPFKALLRQQTQSALEQREFPFFTLTAFPPGFLLHVGGVVSARSVKLLDRIHNPDEPETRDAWWAEIRQEIKSHAKALGCHAVVGYSESTSICEEVCILSASGTAAMLNPRFLQDGIVEGCLEQRLGESQPPGCGFCHTPYDEVNTPFPAHLALCCCCRRQKVPDVLLTTIDLPAQATVVGKGCLIQARLCRLKKKAQAETNATAISNLLPFMEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMVMGLASATGVYLAALPMPGGIQIAGKTPSDGSYEQHVSHMQKKINDTIAKNKELYEISPPEVVEEIIGSPIPEPRQRSRLLRSQSESSDEATELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDVPPPAGFYSCNTEIMPGINNWTSEIQMFTSVRVIRLSSLNLTNQVLNKNFNDLCENLLKSLYFKLRSMIPCCLCHVNFTVSLPEDELIQVTVTAVAITFDKNQALQTTNTQAEKSLQRASSDNEELLQFPLELCSDSLPSHSFPTVKATSVDYSSFADRCGSWIELIKLKAQSIRRGSMKTTAAVDKASAGGEGAARARAPPPCPGSSAGSSVSVVRMTPLSFIPGARITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQAQCLINVSGDAVVFVRESDVEAMSAQQPLALYQPLGSGPEVPT
SIO_010081: C2cd5
subclass of: SO_0000673
so part of: C2cd5
location: complement(join(947707..947838,949136..949282,950146..950348,951752..951853,960801..960887,963830..963917,965674..965763,966584..966682,966944..967005,967427..967490,970173..970313,971288..971452,973817..974003,974687..974878,976817..976912,977876..977990,990460..990568,997280..997356,1006629..1006756,1011231..1011429,1012723..1012878,1013869..1013964,1016637..1016808,1017433..1017519,1021551..1021640))
location: region:947707-1021640:-1
so has part: feature:1021551-1021640:-1:exon
so has part: feature:1017433-1017519:-1:exon
so has part: feature:1016637-1016808:-1:exon
so has part: feature:1013869-1013964:-1:exon
so has part: feature:1012723-1012878:-1:exon
so has part: feature:1011231-1011429:-1:exon
so has part: feature:1006629-1006756:-1:exon
so has part: feature:997280-997356:-1:exon
so has part: feature:990460-990568:-1:exon
so has part: feature:977876-977990:-1:exon
so has part: feature:976817-976912:-1:exon
so has part: feature:974687-974878:-1:exon
so has part: feature:973817-974003:-1:exon
so has part: feature:971288-971452:-1:exon
so has part: feature:970173-970313:-1:exon
so has part: feature:967427-967490:-1:exon
so has part: feature:966944-967005:-1:exon
so has part: feature:966584-966682:-1:exon
so has part: feature:965674-965763:-1:exon
so has part: feature:963830-963917:-1:exon
so has part: feature:960801-960887:-1:exon
so has part: feature:951752-951853:-1:exon
so has part: feature:950146-950348:-1:exon
so has part: feature:949136-949282:-1:exon
so has part: feature:947707-947838:-1:exon

XP_048191108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1021551-1021640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1017433-1017519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1016637-1016808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013869-1013964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1012723-1012878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1011231-1011429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1006629-1006756:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:997280-997356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:990460-990568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:977876-977990:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:976817-976912:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:974687-974878:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:973817-974003:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:971288-971452:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:970173-970313:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:967427-967490:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:966944-967005:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:966584-966682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:965674-965763:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:963830-963917:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:960801-960887:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:951752-951853:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:950146-950348:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:949136-949282:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:947707-947838:-1:exon

Etnk1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Etnk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1061130..1104710
location: region:1061130-1104710:1
so has part: feature:1061130-1104710:1:exon
subclass of: SO_0000010

125342929
type: Gene
SIO_000068: ncbigene

position:1061130:1
position: 1061130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104710:1
position: 1104710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061130-1104710:1:exon

Etnk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Etnk1
product: ethanolamine kinase 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048335272.1
SIO_010081: Etnk1
subclass of: SO_0000673
so part of: Etnk1
location: join(1061130..1061580,1073153..1073412,1081974..1082114,1084643..1084785,1092937..1093020,1094380..1094540,1099254..1099327,1099598..1104710)
location: region:1061130-1104710:1
so has part: feature:1061130-1061580:1:exon
so has part: feature:1073153-1073412:1:exon
so has part: feature:1081974-1082114:1:exon
so has part: feature:1084643-1084785:1:exon
so has part: feature:1092937-1093020:1:exon
so has part: feature:1094380-1094540:1:exon
so has part: feature:1099254-1099327:1:exon
so has part: feature:1099598-1104710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1061130-1061580:1:exon

position:1061580:1
position: 1061580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1073153-1073412:1:exon

position:1073153:1
position: 1073153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073412:1
position: 1073412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1081974-1082114:1:exon

position:1081974:1
position: 1081974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082114:1
position: 1082114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1084643-1084785:1:exon

position:1084643:1
position: 1084643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084785:1
position: 1084785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1092937-1093020:1:exon

position:1092937:1
position: 1092937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093020:1
position: 1093020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1094380-1094540:1:exon

position:1094380:1
position: 1094380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094540:1
position: 1094540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1099254-1099327:1:exon

position:1099254:1
position: 1099254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099327:1
position: 1099327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1099598-1104710:1:exon

position:1099598:1
position: 1099598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Etnk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Etnk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ethanolamine kinase 1 isoform X1
translation: MANYIHVPPGSPDVPRLDVTVQDQEERRCREGALRLLQHLRPHWDPREVTLQLFTDGITNKLIACYVGDTMDDVVLVRIYGNKTELLVDRDEEVKSFRVLQAHGCAPQLYCTFNNGLCYEFIQGEALDPQHVCNPAIFRLIARQLAKIHAIHAHNGWIPKSNLWLKMGKYFSLIPTGFADEELNKRFLSDIPSSQLLQEEMAWLKDILSNLGSPVVLCHNDLLCKNIIYNEKEGDVQFIDYEYSGYNYLAYDIGNHFNEFAGVSDVDYSLYPDRELQGQWLRAYLEAYKEYKGFGTEVTDSDVETLFIHVNQFALASHFFWGLWALIQAKYSTIEFDFLGYAIVRFKQYFKMKPQVMALKVPEERGDPTVLK
SIO_010081: Etnk1
subclass of: SO_0000673
so part of: Etnk1
location: join(1061425..1061580,1073153..1073412,1081974..1082114,1084643..1084785,1092937..1093020,1094380..1094540,1099254..1099327,1099598..1099697)
location: region:1061425-1099697:1
so has part: feature:1061425-1061580:1:exon
so has part: feature:1073153-1073412:1:exon
so has part: feature:1081974-1082114:1:exon
so has part: feature:1084643-1084785:1:exon
so has part: feature:1092937-1093020:1:exon
so has part: feature:1094380-1094540:1:exon
so has part: feature:1099254-1099327:1:exon
so has part: feature:1099598-1099697:1:exon

XP_048191229.1
type: Protein
SIO_000068: ncbiprotein

position:1061425:1
position: 1061425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099697:1
position: 1099697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061425-1061580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1073153-1073412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1081974-1082114:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084643-1084785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1092937-1093020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1094380-1094540:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1099254-1099327:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1099598-1099697:1:exon

Etnk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Etnk1
product: ethanolamine kinase 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048335273.1
SIO_010081: Etnk1
subclass of: SO_0000673
so part of: Etnk1
location: join(1062115..1062211,1073153..1073412,1081974..1082114,1084643..1084785,1092937..1093020,1094380..1094540,1099254..1099327,1099598..1104710)
location: region:1062115-1104710:1
so has part: feature:1062115-1062211:1:exon
so has part: feature:1073153-1073412:1:exon
so has part: feature:1081974-1082114:1:exon
so has part: feature:1084643-1084785:1:exon
so has part: feature:1092937-1093020:1:exon
so has part: feature:1094380-1094540:1:exon
so has part: feature:1099254-1099327:1:exon
so has part: feature:1099598-1104710:1:exon

position:1062115:1
position: 1062115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062115-1062211:1:exon

position:1062211:1
position: 1062211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1073153-1073412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1081974-1082114:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084643-1084785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1092937-1093020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1094380-1094540:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1099254-1099327:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1099598-1104710:1:exon

Etnk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Etnk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ethanolamine kinase 1 isoform X2
translation: MDDVVLVRIYGNKTELLVDRDEEVKSFRVLQAHGCAPQLYCTFNNGLCYEFIQGEALDPQHVCNPAIFRLIARQLAKIHAIHAHNGWIPKSNLWLKMGKYFSLIPTGFADEELNKRFLSDIPSSQLLQEEMAWLKDILSNLGSPVVLCHNDLLCKNIIYNEKEGDVQFIDYEYSGYNYLAYDIGNHFNEFAGVSDVDYSLYPDRELQGQWLRAYLEAYKEYKGFGTEVTDSDVETLFIHVNQFALASHFFWGLWALIQAKYSTIEFDFLGYAIVRFKQYFKMKPQVMALKVPEERGDPTVLK
SIO_010081: Etnk1
subclass of: SO_0000673
so part of: Etnk1
location: join(1073207..1073412,1081974..1082114,1084643..1084785,1092937..1093020,1094380..1094540,1099254..1099327,1099598..1099697)
location: region:1073207-1099697:1
so has part: feature:1073207-1073412:1:exon
so has part: feature:1081974-1082114:1:exon
so has part: feature:1084643-1084785:1:exon
so has part: feature:1092937-1093020:1:exon
so has part: feature:1094380-1094540:1:exon
so has part: feature:1099254-1099327:1:exon
so has part: feature:1099598-1099697:1:exon

XP_048191230.1
type: Protein
SIO_000068: ncbiprotein

position:1073207:1
position: 1073207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073207-1073412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1081974-1082114:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084643-1084785:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1092937-1093020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1094380-1094540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1099254-1099327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1099598-1099697:1:exon

LOC125342884
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1431028..1432162)
location: region:1431028-1432162:-1
so has part: feature:1431028-1432162:-1:exon

125342884
type: Gene
SIO_000068: ncbigene

position:1431028:-1
position: 1431028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1432162:-1
position: 1432162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1431028-1432162:-1:exon

LOC125342884
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342884
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342884
subclass of: SO_0000673
so part of: LOC125342884
location: complement(1431028..1431835)
location: region:1431028-1431835:-1
so has part: feature:1431028-1431835:-1:exon

position:1431835:-1
position: 1431835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1431028-1431835:-1:exon

LOC125342884
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342884
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342884
subclass of: SO_0000673
so part of: LOC125342884
location: complement(1432036..1432162)
location: region:1432036-1432162:-1
so has part: feature:1432036-1432162:-1:exon

position:1432036:-1
position: 1432036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1432036-1432162:-1:exon

Sox5
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Sox5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1609233..2494156)
location: region:1609233-2494156:-1
so has part: feature:1609233-2494156:-1:exon
subclass of: SO_0000010

125342902
type: Gene
SIO_000068: ncbigene

position:1609233:-1
position: 1609233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2494156:-1
position: 2494156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1609233-2494156:-1:exon

Sox5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sox5
product: SRY-box transcription factor 5, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048335235.1
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732245,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934411,2068261..2068334,2344210..2344286,2396846..2396888,2494127..2494156))
location: region:1609233-2494156:-1
so has part: feature:2494127-2494156:-1:exon
so has part: feature:2396846-2396888:-1:exon
so has part: feature:2344210-2344286:-1:exon
so has part: feature:2068261-2068334:-1:exon
so has part: feature:1934180-1934411:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732245:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2494127-2494156:-1:exon

position:2494127:-1
position: 2494127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2396846-2396888:-1:exon

position:2396846:-1
position: 2396846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2396888:-1
position: 2396888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2344210-2344286:-1:exon

position:2344210:-1
position: 2344210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2344286:-1
position: 2344286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2068261-2068334:-1:exon

position:2068261:-1
position: 2068261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2068334:-1
position: 2068334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1934180-1934411:-1:exon

position:1934180:-1
position: 1934180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1934411:-1
position: 1934411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1891414-1891624:-1:exon

position:1891414:-1
position: 1891414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1891624:-1
position: 1891624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1809323-1809409:-1:exon

position:1809323:-1
position: 1809323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1809409:-1
position: 1809409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1802830-1803002:-1:exon

position:1802830:-1
position: 1802830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1803002:-1
position: 1803002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1798325-1798393:-1:exon

position:1798325:-1
position: 1798325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1798393:-1
position: 1798393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1732122-1732245:-1:exon

position:1732122:-1
position: 1732122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1732245:-1
position: 1732245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1710504-1710589:-1:exon

position:1710504:-1
position: 1710504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1710589:-1
position: 1710589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1677797-1677943:-1:exon

position:1677797:-1
position: 1677797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1677943:-1
position: 1677943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1653899-1654076:-1:exon

position:1653899:-1
position: 1653899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1654076:-1
position: 1654076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1640922-1641067:-1:exon

position:1640922:-1
position: 1640922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1641067:-1
position: 1641067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1622892-1623000:-1:exon

position:1622892:-1
position: 1622892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1623000:-1
position: 1623000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1620010-1620183:-1:exon

position:1620010:-1
position: 1620010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1620183:-1
position: 1620183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1611927-1612143:-1:exon

position:1611927:-1
position: 1611927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1612143:-1
position: 1612143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1609233-1609527:-1:exon

position:1609527:-1
position: 1609527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sox5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sox5
product: SRY-box transcription factor 5, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048335237.1
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732245,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934411,2212223..2212289,2344210..2344286,2396846..2396888,2494127..2494156))
location: region:1609233-2494156:-1
so has part: feature:2494127-2494156:-1:exon
so has part: feature:2396846-2396888:-1:exon
so has part: feature:2344210-2344286:-1:exon
so has part: feature:2212223-2212289:-1:exon
so has part: feature:1934180-1934411:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732245:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2494127-2494156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2396846-2396888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2344210-2344286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2212223-2212289:-1:exon

position:2212223:-1
position: 2212223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2212289:-1
position: 2212289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1934180-1934411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1732122-1732245:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sox5
product: SRY-box transcription factor 5, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048335233.1
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732245,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934411,2068261..2068334,2212223..2212289,2344210..2344286,2396846..2396888,2494127..2494156))
location: region:1609233-2494156:-1
so has part: feature:2494127-2494156:-1:exon
so has part: feature:2396846-2396888:-1:exon
so has part: feature:2344210-2344286:-1:exon
so has part: feature:2212223-2212289:-1:exon
so has part: feature:2068261-2068334:-1:exon
so has part: feature:1934180-1934411:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732245:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2494127-2494156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2396846-2396888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2344210-2344286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2212223-2212289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2068261-2068334:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1934180-1934411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1732122-1732245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sox5
product: SRY-box transcription factor 5, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048335234.1
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732245,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934411,2068261..2068334,2269141..2269227,2344210..2344286,2396846..2396888,2494127..2494156))
location: region:1609233-2494156:-1
so has part: feature:2494127-2494156:-1:exon
so has part: feature:2396846-2396888:-1:exon
so has part: feature:2344210-2344286:-1:exon
so has part: feature:2269141-2269227:-1:exon
so has part: feature:2068261-2068334:-1:exon
so has part: feature:1934180-1934411:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732245:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2494127-2494156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2396846-2396888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2344210-2344286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2269141-2269227:-1:exon

position:2269141:-1
position: 2269141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2269227:-1
position: 2269227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2068261-2068334:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1934180-1934411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1732122-1732245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sox5
product: SRY-box transcription factor 5, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048335236.1
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
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Sox5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sox5
product: SRY-box transcription factor 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048335230.1
SIO_010081: Sox5
subclass of: SO_0000673
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Sox5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sox5
product: SRY-box transcription factor 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048335232.1
SIO_010081: Sox5
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Sox5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sox5
product: SRY-box transcription factor 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048335231.1
SIO_010081: Sox5
subclass of: SO_0000673
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Sox5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sox5
product: SRY-box transcription factor 5, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048335240.1
SIO_010081: Sox5
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Sox5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sox5
product: SRY-box transcription factor 5, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048335238.1
SIO_010081: Sox5
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urn:…
SIO_000300: 11
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sox5
product: SRY-box transcription factor 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048335229.1
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732242,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934411,1993577..1993713,1993783..1994123))
location: region:1609233-1994123:-1
so has part: feature:1993783-1994123:-1:exon
so has part: feature:1993577-1993713:-1:exon
so has part: feature:1934180-1934411:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732242:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1993783-1994123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993577-1993713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1934180-1934411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1732122-1732242:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sox5
product: SRY-box transcription factor 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048335228.1
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732245,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934411,1993577..1993713,1993783..1994123))
location: region:1609233-1994123:-1
so has part: feature:1993783-1994123:-1:exon
so has part: feature:1993577-1993713:-1:exon
so has part: feature:1934180-1934411:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732245:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1993783-1994123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993577-1993713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1934180-1934411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1732122-1732245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sox5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-5 isoform X5
translation: MLTDPDLPQEFERMSSRRPASPYGEADGEVAMVTSRQKVEEEESDGPPAFHLPLHEVDGNKVMSSFTTHNSSTSPQKAEEGGRQSGESLSSASLGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPAGKLPGLPQANLGASVSPTSIHTDKSTSSPPPKSKDEVAQPLNLSSKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAPLASPSARVSTIGYLNDHDVVTKAIQEARQMKEQLRREQQVLDGKVAVVNNLGLNNCRTEKEKTTLESLTQQLAAKQNEEGKFSHTIMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQPPLPLAPAGVVYPGALAVAGMPSPRLPSEHSSVSSSPEPGLPGLQGAFGGGAKGPEPLVKEENGDAYEDYEEEEDEDPEVDFGSDSENHLVGQAN
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732242,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934285..1934411,1993577..1993614))
location: region:1609233-1993614:-1
so has part: feature:1993577-1993614:-1:exon
so has part: feature:1934285-1934411:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732242:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

XP_048191197.1
type: Protein
SIO_000068: ncbiprotein

position:1993614:-1
position: 1993614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1993577-1993614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1934285-1934411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1732122-1732242:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sox5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-5 isoform X4
translation: MLTDPDLPQEFERMSSRRPASPYGEADGEVAMVTSRQKVEEEESDGPPAFHLPLHEVDGNKVMSSFTTHNSSTSPQKAEEGGRQSGESLSSASLGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPAGKLPGLPQANLGASVSPTSIHTDKSTSSPPPKSKDEVAQPLNLSSKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAPLASPSARVSTIGYLNDHDVVTKAIQEARQMKEQLRREQQVLDGKVAVVNNLGLNNCRTEKEKTTLESLTQQLAAKQNEEGKFSHTIMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQPPLPLAPAGVVYPGALAVAGMPSPRLPSEHSSVSSSPEPGLPGLQGAFGGGAKGPEPLVKEENGDAYEDYEEEEDEDPEVDFGSDSENHLVGQAN
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732245,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934285..1934411,1993577..1993614))
location: region:1609233-1993614:-1
so has part: feature:1993577-1993614:-1:exon
so has part: feature:1934285-1934411:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732245:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

XP_048191195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1993577-1993614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1934285-1934411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1732122-1732245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sox5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-5 isoform X2
translation: MLTDPDLPQEFERMSSRRPASPYGEADGEVAMVTSRQKVEEEESDGPPAFHLPLHVSFPNQPHEEEFQPVSLLTQETCGPRTPTSQHSTMEVDGNKVMSSFTTHNSSTSPQKAEEGGRQSGESLSSASLGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPAGKLPGLPQANLGASVSPTSIHTDKSTSSPPPKSKDEVAQPLNLSSKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAPLASPSARVSTIGYLNDHDVVTKAIQEARQMKEQLRREQQVLDGKVAVVNNLGLNNCRTEKEKTTLESLTQQLAAKQNEEGKFSHTIMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQPPLPLAPAGVVYPGALAVAGMPSPRLPSEHSSVSSSPEPGLPGLQGAFGGGAKGPEPLVKEENGDAYEDYEEEEDEDPEVDFGSDSENHLVGQAN
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732242,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934411,1993577..1993614))
location: region:1609233-1993614:-1
so has part: feature:1993577-1993614:-1:exon
so has part: feature:1934180-1934411:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732242:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

XP_048191186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1993577-1993614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1934180-1934411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1732122-1732242:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sox5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-5 isoform X1
translation: MLTDPDLPQEFERMSSRRPASPYGEADGEVAMVTSRQKVEEEESDGPPAFHLPLHVSFPNQPHEEEFQPVSLLTQETCGPRTPTSQHSTMEVDGNKVMSSFTTHNSSTSPQKAEEGGRQSGESLSSASLGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPAGKLPGLPQANLGASVSPTSIHTDKSTSSPPPKSKDEVAQPLNLSSKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAPLASPSARVSTIGYLNDHDVVTKAIQEARQMKEQLRREQQVLDGKVAVVNNLGLNNCRTEKEKTTLESLTQQLAAKQNEEGKFSHTIMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQPPLPLAPAGVVYPGALAVAGMPSPRLPSEHSSVSSSPEPGLPGLQGAFGGGAKGPEPLVKEENGDAYEDYEEEEDEDPEVDFGSDSENHLVGQAN
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732245,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934411,1993577..1993614))
location: region:1609233-1993614:-1
so has part: feature:1993577-1993614:-1:exon
so has part: feature:1934180-1934411:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732245:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

XP_048191185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1993577-1993614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1934180-1934411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1732122-1732245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sox5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-5 isoform X3
translation: MSSRRPASPYGEADGEVAMVTSRQKVEEEESDGPPAFHLPLHVSFPNQPHEEEFQPVSLLTQETCGPRTPTSQHSTMEVDGNKVMSSFTTHNSSTSPQKAEEGGRQSGESLSSASLGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPAGKLPGLPQANLGASVSPTSIHTDKSTSSPPPKSKDEVAQPLNLSSKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAPLASPSARVSTIGYLNDHDVVTKAIQEARQMKEQLRREQQVLDGKVAVVNNLGLNNCRTEKEKTTLESLTQQLAAKQNEEGKFSHTIMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQPPLPLAPAGVVYPGALAVAGMPSPRLPSEHSSVSSSPEPGLPGLQGAFGGGAKGPEPLVKEENGDAYEDYEEEEDEDPEVDFGSDSENHLVGQAN
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732245,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934410))
location: region:1609233-1934410:-1
so has part: feature:1934180-1934410:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732245:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

XP_048191187.1
type: Protein
SIO_000068: ncbiprotein

position:1934410:-1
position: 1934410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1934180-1934410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1732122-1732245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sox5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-5 isoform X3
translation: MSSRRPASPYGEADGEVAMVTSRQKVEEEESDGPPAFHLPLHVSFPNQPHEEEFQPVSLLTQETCGPRTPTSQHSTMEVDGNKVMSSFTTHNSSTSPQKAEEGGRQSGESLSSASLGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPAGKLPGLPQANLGASVSPTSIHTDKSTSSPPPKSKDEVAQPLNLSSKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAPLASPSARVSTIGYLNDHDVVTKAIQEARQMKEQLRREQQVLDGKVAVVNNLGLNNCRTEKEKTTLESLTQQLAAKQNEEGKFSHTIMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQPPLPLAPAGVVYPGALAVAGMPSPRLPSEHSSVSSSPEPGLPGLQGAFGGGAKGPEPLVKEENGDAYEDYEEEEDEDPEVDFGSDSENHLVGQAN
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732245,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934410))
location: region:1609233-1934410:-1
so has part: feature:1934180-1934410:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732245:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

XP_048191188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1934180-1934410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1732122-1732245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sox5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-5 isoform X3
translation: MSSRRPASPYGEADGEVAMVTSRQKVEEEESDGPPAFHLPLHVSFPNQPHEEEFQPVSLLTQETCGPRTPTSQHSTMEVDGNKVMSSFTTHNSSTSPQKAEEGGRQSGESLSSASLGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPAGKLPGLPQANLGASVSPTSIHTDKSTSSPPPKSKDEVAQPLNLSSKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAPLASPSARVSTIGYLNDHDVVTKAIQEARQMKEQLRREQQVLDGKVAVVNNLGLNNCRTEKEKTTLESLTQQLAAKQNEEGKFSHTIMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQPPLPLAPAGVVYPGALAVAGMPSPRLPSEHSSVSSSPEPGLPGLQGAFGGGAKGPEPLVKEENGDAYEDYEEEEDEDPEVDFGSDSENHLVGQAN
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732245,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934410))
location: region:1609233-1934410:-1
so has part: feature:1934180-1934410:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732245:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

XP_048191189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1934180-1934410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1732122-1732245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sox5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-5 isoform X3
translation: MSSRRPASPYGEADGEVAMVTSRQKVEEEESDGPPAFHLPLHVSFPNQPHEEEFQPVSLLTQETCGPRTPTSQHSTMEVDGNKVMSSFTTHNSSTSPQKAEEGGRQSGESLSSASLGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPAGKLPGLPQANLGASVSPTSIHTDKSTSSPPPKSKDEVAQPLNLSSKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAPLASPSARVSTIGYLNDHDVVTKAIQEARQMKEQLRREQQVLDGKVAVVNNLGLNNCRTEKEKTTLESLTQQLAAKQNEEGKFSHTIMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQPPLPLAPAGVVYPGALAVAGMPSPRLPSEHSSVSSSPEPGLPGLQGAFGGGAKGPEPLVKEENGDAYEDYEEEEDEDPEVDFGSDSENHLVGQAN
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732245,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934410))
location: region:1609233-1934410:-1
so has part: feature:1934180-1934410:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732245:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

XP_048191190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1934180-1934410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1732122-1732245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sox5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-5 isoform X3
translation: MSSRRPASPYGEADGEVAMVTSRQKVEEEESDGPPAFHLPLHVSFPNQPHEEEFQPVSLLTQETCGPRTPTSQHSTMEVDGNKVMSSFTTHNSSTSPQKAEEGGRQSGESLSSASLGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPAGKLPGLPQANLGASVSPTSIHTDKSTSSPPPKSKDEVAQPLNLSSKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAPLASPSARVSTIGYLNDHDVVTKAIQEARQMKEQLRREQQVLDGKVAVVNNLGLNNCRTEKEKTTLESLTQQLAAKQNEEGKFSHTIMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQPPLPLAPAGVVYPGALAVAGMPSPRLPSEHSSVSSSPEPGLPGLQGAFGGGAKGPEPLVKEENGDAYEDYEEEEDEDPEVDFGSDSENHLVGQAN
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732245,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934410))
location: region:1609233-1934410:-1
so has part: feature:1934180-1934410:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732245:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

XP_048191191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1934180-1934410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1732122-1732245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sox5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-5 isoform X3
translation: MSSRRPASPYGEADGEVAMVTSRQKVEEEESDGPPAFHLPLHVSFPNQPHEEEFQPVSLLTQETCGPRTPTSQHSTMEVDGNKVMSSFTTHNSSTSPQKAEEGGRQSGESLSSASLGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPAGKLPGLPQANLGASVSPTSIHTDKSTSSPPPKSKDEVAQPLNLSSKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAPLASPSARVSTIGYLNDHDVVTKAIQEARQMKEQLRREQQVLDGKVAVVNNLGLNNCRTEKEKTTLESLTQQLAAKQNEEGKFSHTIMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQPPLPLAPAGVVYPGALAVAGMPSPRLPSEHSSVSSSPEPGLPGLQGAFGGGAKGPEPLVKEENGDAYEDYEEEEDEDPEVDFGSDSENHLVGQAN
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732245,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934410))
location: region:1609233-1934410:-1
so has part: feature:1934180-1934410:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732245:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

XP_048191192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1934180-1934410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1732122-1732245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sox5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-5 isoform X3
translation: MSSRRPASPYGEADGEVAMVTSRQKVEEEESDGPPAFHLPLHVSFPNQPHEEEFQPVSLLTQETCGPRTPTSQHSTMEVDGNKVMSSFTTHNSSTSPQKAEEGGRQSGESLSSASLGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPAGKLPGLPQANLGASVSPTSIHTDKSTSSPPPKSKDEVAQPLNLSSKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAPLASPSARVSTIGYLNDHDVVTKAIQEARQMKEQLRREQQVLDGKVAVVNNLGLNNCRTEKEKTTLESLTQQLAAKQNEEGKFSHTIMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQPPLPLAPAGVVYPGALAVAGMPSPRLPSEHSSVSSSPEPGLPGLQGAFGGGAKGPEPLVKEENGDAYEDYEEEEDEDPEVDFGSDSENHLVGQAN
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732245,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934410))
location: region:1609233-1934410:-1
so has part: feature:1934180-1934410:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732245:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

XP_048191193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1934180-1934410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1732122-1732245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1609233-1609527:-1:exon

Sox5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sox5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-5 isoform X3
translation: MSSRRPASPYGEADGEVAMVTSRQKVEEEESDGPPAFHLPLHVSFPNQPHEEEFQPVSLLTQETCGPRTPTSQHSTMEVDGNKVMSSFTTHNSSTSPQKAEEGGRQSGESLSSASLGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPAGKLPGLPQANLGASVSPTSIHTDKSTSSPPPKSKDEVAQPLNLSSKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAPLASPSARVSTIGYLNDHDVVTKAIQEARQMKEQLRREQQVLDGKVAVVNNLGLNNCRTEKEKTTLESLTQQLAAKQNEEGKFSHTIMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQPPLPLAPAGVVYPGALAVAGMPSPRLPSEHSSVSSSPEPGLPGLQGAFGGGAKGPEPLVKEENGDAYEDYEEEEDEDPEVDFGSDSENHLVGQAN
SIO_010081: Sox5
subclass of: SO_0000673
so part of: Sox5
location: complement(join(1609233..1609527,1611927..1612143,1620010..1620183,1622892..1623000,1640922..1641067,1653899..1654076,1677797..1677943,1710504..1710589,1732122..1732245,1798325..1798393,1802830..1803002,1809323..1809409,1891414..1891624,1934180..1934410))
location: region:1609233-1934410:-1
so has part: feature:1934180-1934410:-1:exon
so has part: feature:1891414-1891624:-1:exon
so has part: feature:1809323-1809409:-1:exon
so has part: feature:1802830-1803002:-1:exon
so has part: feature:1798325-1798393:-1:exon
so has part: feature:1732122-1732245:-1:exon
so has part: feature:1710504-1710589:-1:exon
so has part: feature:1677797-1677943:-1:exon
so has part: feature:1653899-1654076:-1:exon
so has part: feature:1640922-1641067:-1:exon
so has part: feature:1622892-1623000:-1:exon
so has part: feature:1620010-1620183:-1:exon
so has part: feature:1611927-1612143:-1:exon
so has part: feature:1609233-1609527:-1:exon

XP_048191194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1934180-1934410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1891414-1891624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1809323-1809409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1802830-1803002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798325-1798393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1732122-1732245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1710504-1710589:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1677797-1677943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1653899-1654076:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1640922-1641067:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1622892-1623000:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1620010-1620183:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1611927-1612143:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1609233-1609527:-1:exon

LOC125342905
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1675433..1675711
location: region:1675433-1675711:1
so has part: feature:1675433-1675711:1:exon
subclass of: SO_0000011

125342905
type: Gene
SIO_000068: ncbigene

position:1675433:1
position: 1675433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1675711:1
position: 1675711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675433-1675711:1:exon

LOC125342905
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342905
product: uncharacterized LOC125342905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007209273.1
SIO_010081: LOC125342905
subclass of: SO_0000673
so part of: LOC125342905
location: join(1675433..1675536,1675625..1675635,1675668..1675711)
location: region:1675433-1675711:1
so has part: feature:1675433-1675536:1:exon
so has part: feature:1675625-1675635:1:exon
so has part: feature:1675668-1675711:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1675433-1675536:1:exon

position:1675536:1
position: 1675536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1675625-1675635:1:exon

position:1675625:1
position: 1675625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1675635:1
position: 1675635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1675668-1675711:1:exon

position:1675668:1
position: 1675668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342904
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1882933..1883788)
location: region:1882933-1883788:-1
so has part: feature:1882933-1883788:-1:exon

125342904
type: Gene
SIO_000068: ncbigene

position:1882933:-1
position: 1882933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1883788:-1
position: 1883788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1882933-1883788:-1:exon

LOC125342904
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342904
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342904
subclass of: SO_0000673
so part of: LOC125342904
location: complement(1882933..1883788)
location: region:1882933-1883788:-1
so has part: feature:1882933-1883788:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1882933-1883788:-1:exon

LOC125342906
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342906
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2176884..2203607
location: region:2176884-2203607:1
so has part: feature:2176884-2203607:1:exon
subclass of: SO_0000011

125342906
type: Gene
SIO_000068: ncbigene

position:2176884:1
position: 2176884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2203607:1
position: 2203607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2176884-2203607:1:exon

LOC125342906
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342906
product: uncharacterized LOC125342906
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007209274.1
SIO_010081: LOC125342906
subclass of: SO_0000673
so part of: LOC125342906
location: join(2176884..2176930,2178745..2178748,2203489..2203607)
location: region:2176884-2203607:1
so has part: feature:2176884-2176930:1:exon
so has part: feature:2178745-2178748:1:exon
so has part: feature:2203489-2203607:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2176884-2176930:1:exon

position:2176930:1
position: 2176930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2178745-2178748:1:exon

position:2178745:1
position: 2178745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2178748:1
position: 2178748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2203489-2203607:1:exon

position:2203489:1
position: 2203489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Trnag-gcc
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Trnag-gcc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2411572..2411644
location: region:2411572-2411644:1
so has part: feature:2411572-2411644:1:exon
subclass of: SO_0000663

125342933
type: Gene
SIO_000068: ncbigene

position:2411572:1
position: 2411572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2411644:1
position: 2411644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2411572-2411644:1:exon

Trnag-gcc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 214514
gene: Trnag-gcc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2411604..2411606,aa:Gly,seq:gcc)
SIO_010081: Trnag-gcc
subclass of: SO_0000673
so part of: Trnag-gcc
location: 2411572..2411644
location: region:2411572-2411644:1
so has part: feature:2411572-2411644:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2411572-2411644:1:exon

Bcat1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Bcat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2611521..2633957)
location: region:2611521-2633957:-1
so has part: feature:2611521-2633957:-1:exon
subclass of: SO_0000010

125342853
type: Gene
SIO_000068: ncbigene

position:2611521:-1
position: 2611521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2633957:-1
position: 2633957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2611521-2633957:-1:exon

Bcat1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Bcat1
product: branched chain amino acid transaminase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048335168.1
SIO_010081: Bcat1
subclass of: SO_0000673
so part of: Bcat1
location: complement(join(2611521..2612398,2614303..2614377,2616953..2617093,2619031..2619116,2621479..2621621,2623632..2623795,2627205..2627324,2627885..2627995,2630326..2630526,2633905..2633957))
location: region:2611521-2633957:-1
so has part: feature:2633905-2633957:-1:exon
so has part: feature:2630326-2630526:-1:exon
so has part: feature:2627885-2627995:-1:exon
so has part: feature:2627205-2627324:-1:exon
so has part: feature:2623632-2623795:-1:exon
so has part: feature:2621479-2621621:-1:exon
so has part: feature:2619031-2619116:-1:exon
so has part: feature:2616953-2617093:-1:exon
so has part: feature:2614303-2614377:-1:exon
so has part: feature:2611521-2612398:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2633905-2633957:-1:exon

position:2633905:-1
position: 2633905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2630326-2630526:-1:exon

position:2630326:-1
position: 2630326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2630526:-1
position: 2630526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2627885-2627995:-1:exon

position:2627885:-1
position: 2627885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2627995:-1
position: 2627995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2627205-2627324:-1:exon

position:2627205:-1
position: 2627205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2627324:-1
position: 2627324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2623632-2623795:-1:exon

position:2623632:-1
position: 2623632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2623795:-1
position: 2623795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2621479-2621621:-1:exon

position:2621479:-1
position: 2621479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2621621:-1
position: 2621621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2619031-2619116:-1:exon

position:2619031:-1
position: 2619031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2619116:-1
position: 2619116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2616953-2617093:-1:exon

position:2616953:-1
position: 2616953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2617093:-1
position: 2617093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2614303-2614377:-1:exon

position:2614303:-1
position: 2614303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2614377:-1
position: 2614377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2611521-2612398:-1:exon

position:2612398:-1
position: 2612398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Bcat1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Bcat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: branched-chain-amino-acid aminotransferase, cytosolic
translation: MLTVEWCADSGWGKPHIRPFQNLSLHPASSALHYAIQLFEGLKAFRGVDNKIRLFRPHLNMDRMLRSAVRSTLPVFDQQELLECIQQLVKLDQEWVPYSTAASLYIRPTMIGTEPSLGVKKPRKALLFVILSPVGPYFSSGTFNPVSLWANPKYVRAWEGGTGDYKIGGNYGSSLWAQCEAADHGCQQVLWLYGKDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRQSILELTRDWGEFKVSERYLTMGELAGALEEKRVKEMFGSGTACVVCPVSNILYQGQTLHIPTMENGPKITSRIFTKLNDIQYGREESDWTVELP
SIO_010081: Bcat1
subclass of: SO_0000673
so part of: Bcat1
location: complement(join(2612357..2612398,2614303..2614377,2616953..2617093,2619031..2619116,2621479..2621621,2623632..2623795,2627205..2627324,2627885..2627995,2630326..2630436))
location: region:2612357-2630436:-1
so has part: feature:2630326-2630436:-1:exon
so has part: feature:2627885-2627995:-1:exon
so has part: feature:2627205-2627324:-1:exon
so has part: feature:2623632-2623795:-1:exon
so has part: feature:2621479-2621621:-1:exon
so has part: feature:2619031-2619116:-1:exon
so has part: feature:2616953-2617093:-1:exon
so has part: feature:2614303-2614377:-1:exon
so has part: feature:2612357-2612398:-1:exon

XP_048191125.1
type: Protein
SIO_000068: ncbiprotein

position:2612357:-1
position: 2612357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2630436:-1
position: 2630436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2630326-2630436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2627885-2627995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2627205-2627324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2623632-2623795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2621479-2621621:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2619031-2619116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2616953-2617093:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2614303-2614377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2612357-2612398:-1:exon

LOC125342878
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2656128..2667523
location: region:2656128-2667523:1
so has part: feature:2656128-2667523:1:exon
subclass of: SO_0000010

125342878
type: Gene
SIO_000068: ncbigene

position:2656128:1
position: 2656128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2667523:1
position: 2667523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2656128-2667523:1:exon

LOC125342878
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342878
product: sulfotransferase 6B1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048335201.1
SIO_010081: LOC125342878
subclass of: SO_0000673
so part of: LOC125342878
location: join(2656128..2656272,2657897..2658081,2661573..2661699,2665943..2666037,2666193..2666379,2667370..2667523)
location: region:2656128-2667523:1
so has part: feature:2656128-2656272:1:exon
so has part: feature:2657897-2658081:1:exon
so has part: feature:2661573-2661699:1:exon
so has part: feature:2665943-2666037:1:exon
so has part: feature:2666193-2666379:1:exon
so has part: feature:2667370-2667523:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2656128-2656272:1:exon

position:2656272:1
position: 2656272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2657897-2658081:1:exon

position:2657897:1
position: 2657897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2658081:1
position: 2658081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2661573-2661699:1:exon

position:2661573:1
position: 2661573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2661699:1
position: 2661699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2665943-2666037:1:exon

position:2665943:1
position: 2665943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2666037:1
position: 2666037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2666193-2666379:1:exon

position:2666193:1
position: 2666193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2666379:1
position: 2666379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2667370-2667523:1:exon

position:2667370:1
position: 2667370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342878
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfotransferase 6B1-like
translation: MSSENQSSDLHKFKGILYPSLTSEELLNSLDSFEAREDDVYLVSYPKSGTHWVAEVIENIASTRLMLTPPLELGDIAMFEELKLYSKRRMIPTHLSYEMLPGTIKQKQCKIIYIVRNPKDTAVSLFHYYRNNPNLPDVDSWAGFFELFLRGDVVYGSWFDHVLGWEDHRHEKNILILYYEDMKKDFSKSLKKITTFLGMGMNDSEIHKIAWKTSFSEMKNNASKENSDSNHTICALTSDRKLVFRKGVVGDWINYFTPKQKKVFDELFVERMKQSEVARHLKEYS
SIO_010081: LOC125342878
subclass of: SO_0000673
so part of: LOC125342878
location: join(2656128..2656272,2657897..2658081,2661573..2661699,2665943..2666037,2666193..2666379,2667370..2667488)
location: region:2656128-2667488:1
so has part: feature:2656128-2656272:1:exon
so has part: feature:2657897-2658081:1:exon
so has part: feature:2661573-2661699:1:exon
so has part: feature:2665943-2666037:1:exon
so has part: feature:2666193-2666379:1:exon
so has part: feature:2667370-2667488:1:exon

XP_048191158.1
type: Protein
SIO_000068: ncbiprotein

position:2667488:1
position: 2667488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2656128-2656272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2657897-2658081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2661573-2661699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2665943-2666037:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2666193-2666379:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2667370-2667488:1:exon

Cmas
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Cmas
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2669795..2681082)
location: region:2669795-2681082:-1
so has part: feature:2669795-2681082:-1:exon
subclass of: SO_0000010

125342877
type: Gene
SIO_000068: ncbigene

position:2669795:-1
position: 2669795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2681082:-1
position: 2681082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2669795-2681082:-1:exon

Cmas
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cmas
product: cytidine monophosphate N-acetylneuraminic acid synthetase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048335200.1
SIO_010081: Cmas
subclass of: SO_0000673
so part of: Cmas
location: complement(join(2669795..2670383,2671110..2671263,2672465..2672636,2673199..2673293,2674355..2674488,2675897..2676052,2677033..2677175,2680784..2681082))
location: region:2669795-2681082:-1
so has part: feature:2680784-2681082:-1:exon
so has part: feature:2677033-2677175:-1:exon
so has part: feature:2675897-2676052:-1:exon
so has part: feature:2674355-2674488:-1:exon
so has part: feature:2673199-2673293:-1:exon
so has part: feature:2672465-2672636:-1:exon
so has part: feature:2671110-2671263:-1:exon
so has part: feature:2669795-2670383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2680784-2681082:-1:exon

position:2680784:-1
position: 2680784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2677033-2677175:-1:exon

position:2677033:-1
position: 2677033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2677175:-1
position: 2677175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2675897-2676052:-1:exon

position:2675897:-1
position: 2675897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2676052:-1
position: 2676052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2674355-2674488:-1:exon

position:2674355:-1
position: 2674355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2674488:-1
position: 2674488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2673199-2673293:-1:exon

position:2673199:-1
position: 2673199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2673293:-1
position: 2673293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2672465-2672636:-1:exon

position:2672465:-1
position: 2672465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2672636:-1
position: 2672636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2671110-2671263:-1:exon

position:2671110:-1
position: 2671110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2671263:-1
position: 2671263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2669795-2670383:-1:exon

position:2670383:-1
position: 2670383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cmas
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cmas
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acylneuraminate cytidylyltransferase
translation: MDAVERAPAASASSPRGRPARGRPPKLQRSARGGAARGAEKPPHLAALVLARGGSKGIPLKNIRRLAGVPLIGWVLRAALDSGVFQSVWVSTDHDEIENIAKQFGAQVHRRSSETSKDSSTSLDAIVEFLKYHNEVDIVGNIQATSPCLHPTDLQKVADMIREEGYDSVFSVVRRHQFRWSEIQKGVCEVTEPLNLNPAKRPRRQDWSGELYENGSFYFAKRHLIEMGYLQGGKMAYYEMRAEHSVDIDVDIDWPIAEQRVLRYGYFGKEKLKEIKLLVCNIDGCLTNGHVYVSGDQKEIISYDVKDAIGISLLKKSGIEVRFISERSCSKQTLASLKLDCKMEISIADKLAVVDEWRKEMGLCWKQVAYLGNEVSDEECLKRVGLSGVPADACSSAQKAGGYICRCNGGRGAIREFAEHIFLLMEKVTNSCQK
SIO_010081: Cmas
subclass of: SO_0000673
so part of: Cmas
location: complement(join(2670193..2670383,2671110..2671263,2672465..2672636,2673199..2673293,2674355..2674488,2675897..2676052,2677033..2677175,2680784..2681043))
location: region:2670193-2681043:-1
so has part: feature:2680784-2681043:-1:exon
so has part: feature:2677033-2677175:-1:exon
so has part: feature:2675897-2676052:-1:exon
so has part: feature:2674355-2674488:-1:exon
so has part: feature:2673199-2673293:-1:exon
so has part: feature:2672465-2672636:-1:exon
so has part: feature:2671110-2671263:-1:exon
so has part: feature:2670193-2670383:-1:exon

XP_048191157.1
type: Protein
SIO_000068: ncbiprotein

position:2670193:-1
position: 2670193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2681043:-1
position: 2681043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2680784-2681043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2677033-2677175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2675897-2676052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2674355-2674488:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2673199-2673293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2672465-2672636:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2671110-2671263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2670193-2670383:-1:exon

Abcc9
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Abcc9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2695571..2777757
location: region:2695571-2777757:1
so has part: feature:2695571-2777757:1:exon
subclass of: SO_0000010

125342844
type: Gene
SIO_000068: ncbigene

position:2695571:1
position: 2695571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2777757:1
position: 2777757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2695571-2777757:1:exon

Abcc9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Abcc9
product: ATP binding cassette subfamily C member 9
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048335157.1
SIO_010081: Abcc9
subclass of: SO_0000673
so part of: Abcc9
location: join(2695571..2695638,2700715..2700876,2704966..2705107,2707760..2707881,2709695..2709861,2711710..2711952,2713880..2714074,2716147..2716299,2717740..2717895,2718928..2719062,2720859..2721021,2723629..2723669,2724508..2724650,2730910..2731018,2735803..2735907,2739626..2739698,2741368..2741473,2747562..2747663,2748769..2748853,2749617..2749697,2750528..2750665,2750764..2750889,2752810..2752906,2753313..2753542,2754402..2754550,2755299..2755368,2756067..2756224,2757449..2757541,2761307..2761409,2766824..2766925,2768526..2768646,2769274..2769405,2770394..2770472,2771756..2771864,2773416..2773519,2774212..2774346,2774724..2774786,2776467..2776637,2777441..2777757)
location: region:2695571-2777757:1
so has part: feature:2695571-2695638:1:exon
so has part: feature:2700715-2700876:1:exon
so has part: feature:2704966-2705107:1:exon
so has part: feature:2707760-2707881:1:exon
so has part: feature:2709695-2709861:1:exon
so has part: feature:2711710-2711952:1:exon
so has part: feature:2713880-2714074:1:exon
so has part: feature:2716147-2716299:1:exon
so has part: feature:2717740-2717895:1:exon
so has part: feature:2718928-2719062:1:exon
so has part: feature:2720859-2721021:1:exon
so has part: feature:2723629-2723669:1:exon
so has part: feature:2724508-2724650:1:exon
so has part: feature:2730910-2731018:1:exon
so has part: feature:2735803-2735907:1:exon
so has part: feature:2739626-2739698:1:exon
so has part: feature:2741368-2741473:1:exon
so has part: feature:2747562-2747663:1:exon
so has part: feature:2748769-2748853:1:exon
so has part: feature:2749617-2749697:1:exon
so has part: feature:2750528-2750665:1:exon
so has part: feature:2750764-2750889:1:exon
so has part: feature:2752810-2752906:1:exon
so has part: feature:2753313-2753542:1:exon
so has part: feature:2754402-2754550:1:exon
so has part: feature:2755299-2755368:1:exon
so has part: feature:2756067-2756224:1:exon
so has part: feature:2757449-2757541:1:exon
so has part: feature:2761307-2761409:1:exon
so has part: feature:2766824-2766925:1:exon
so has part: feature:2768526-2768646:1:exon
so has part: feature:2769274-2769405:1:exon
so has part: feature:2770394-2770472:1:exon
so has part: feature:2771756-2771864:1:exon
so has part: feature:2773416-2773519:1:exon
so has part: feature:2774212-2774346:1:exon
so has part: feature:2774724-2774786:1:exon
so has part: feature:2776467-2776637:1:exon
so has part: feature:2777441-2777757:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2695571-2695638:1:exon

position:2695638:1
position: 2695638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2700715-2700876:1:exon

position:2700715:1
position: 2700715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2700876:1
position: 2700876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2704966-2705107:1:exon

position:2704966:1
position: 2704966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2705107:1
position: 2705107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2707760-2707881:1:exon

position:2707760:1
position: 2707760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2707881:1
position: 2707881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2709695-2709861:1:exon

position:2709695:1
position: 2709695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2709861:1
position: 2709861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2711710-2711952:1:exon

position:2711710:1
position: 2711710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2711952:1
position: 2711952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2713880-2714074:1:exon

position:2713880:1
position: 2713880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2714074:1
position: 2714074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2716147-2716299:1:exon

position:2716147:1
position: 2716147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2716299:1
position: 2716299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2717740-2717895:1:exon

position:2717740:1
position: 2717740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2717895:1
position: 2717895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2718928-2719062:1:exon

position:2718928:1
position: 2718928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2719062:1
position: 2719062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2720859-2721021:1:exon

position:2720859:1
position: 2720859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2721021:1
position: 2721021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2723629-2723669:1:exon

position:2723629:1
position: 2723629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2723669:1
position: 2723669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2724508-2724650:1:exon

position:2724508:1
position: 2724508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2724650:1
position: 2724650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2730910-2731018:1:exon

position:2730910:1
position: 2730910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2731018:1
position: 2731018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2735803-2735907:1:exon

position:2735803:1
position: 2735803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2735907:1
position: 2735907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2739626-2739698:1:exon

position:2739626:1
position: 2739626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2739698:1
position: 2739698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2741368-2741473:1:exon

position:2741368:1
position: 2741368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2741473:1
position: 2741473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2747562-2747663:1:exon

position:2747562:1
position: 2747562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2747663:1
position: 2747663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2748769-2748853:1:exon

position:2748769:1
position: 2748769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2748853:1
position: 2748853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2749617-2749697:1:exon

position:2749617:1
position: 2749617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2749697:1
position: 2749697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2750528-2750665:1:exon

position:2750528:1
position: 2750528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2750665:1
position: 2750665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2750764-2750889:1:exon

position:2750764:1
position: 2750764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2750889:1
position: 2750889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2752810-2752906:1:exon

position:2752810:1
position: 2752810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2752906:1
position: 2752906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2753313-2753542:1:exon

position:2753313:1
position: 2753313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2753542:1
position: 2753542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2754402-2754550:1:exon

position:2754402:1
position: 2754402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2754550:1
position: 2754550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2755299-2755368:1:exon

position:2755299:1
position: 2755299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2755368:1
position: 2755368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2756067-2756224:1:exon

position:2756067:1
position: 2756067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2756224:1
position: 2756224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2757449-2757541:1:exon

position:2757449:1
position: 2757449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2757541:1
position: 2757541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2761307-2761409:1:exon

position:2761307:1
position: 2761307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2761409:1
position: 2761409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2766824-2766925:1:exon

position:2766824:1
position: 2766824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2766925:1
position: 2766925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2768526-2768646:1:exon

position:2768526:1
position: 2768526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2768646:1
position: 2768646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2769274-2769405:1:exon

position:2769274:1
position: 2769274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2769405:1
position: 2769405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2770394-2770472:1:exon

position:2770394:1
position: 2770394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2770472:1
position: 2770472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2771756-2771864:1:exon

position:2771756:1
position: 2771756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2771864:1
position: 2771864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2773416-2773519:1:exon

position:2773416:1
position: 2773416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2773519:1
position: 2773519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2774212-2774346:1:exon

position:2774212:1
position: 2774212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2774346:1
position: 2774346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2774724-2774786:1:exon

position:2774724:1
position: 2774724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2774786:1
position: 2774786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2776467-2776637:1:exon

position:2776467:1
position: 2776467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2776637:1
position: 2776637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2777441-2777757:1:exon

position:2777441:1
position: 2777441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Abcc9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Abcc9
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ATP-binding cassette sub-family C member 9
translation: MSFAFCGNNISSYNIYDGVLQNPCFVDALNLVPHVFLLFITFPILFIGWGSQSSKVQIHHNTWLHFPGHNLRWILTFALLFVHVCEIAEGVVSDSRRESRHLHLFMPAVMGFVATTTSIVYYHNIETSNFPKLLLALFLYWVMAFITKTIKLVKYWQSGWGVSDLRFCITGIMVILNGLLMAVEINVIRVRKYVFFMNPQKVKPPEDLQDLGVRFLQPFVNLLSKATYWWMNTLIISAHKKPIDLKTIGKLPIAMRAVTNYVCLKDAYEEQKKKVADHPNRTPSIWLAMYRAFGRPILLSSTFRYLADLLGFAGPLCISGIVQRVNDTQNGTVHTGGISKTLSSKEFLENAYVLAVLLFLALILQRTFLQASYYVTIQTGINLRGALLAMIYNKILRLSTSNLSMGEMTLGQVNNLVAIETNQLMWFLFLCPNLWAMPVQIIMGVILLYNLLGSSALVGAAVIVLLAPIQYFIATKLAEAQKSTLDYSTERLKKTNEILKGIKLLKLYAWEHIFCKSVEETRMKELSSLKTFALYTSLSIFMNAAIPIAAVLATFVTHAYASGNNLKPAEAFASLSLFHILVTPLFLLSTVVRFAVKAIISVQKLNEFLLSDEISSHSWRAGEGSLPFESCKKHTGVQSKTINRKQPGRYHLDGCESTRRLRPAETEDIAIKVTNGFFSWGSSVPTLSNIDIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLDGKVQWNNRNRYSVAYAAQKPWLLNATVEENITFGSPFNRQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLTHADWIIAMKDGSVLREGTLKDIQTKDVELYEHWKTLMNRQDQELEKDMEADQTTLERKTLRRAMYSREGKAQMEDEDEEEEEEEDDDDNMSTVMRCRTKMPWKTCWWYLTSGGFFLLFLMIFSKLLKHSVIVAIDYWLATWTSTYSIASAGKADQTYYVAGFSILCGAGIVLCLVTSLTVEWMGLTAAKNLHHNLLNKIILGPIRFFDTTPLGLILNRFSADTNIIDQHIPPTLESLTRSTLLCLSAIGMISYATPVFLVALLPLGVAFYFIQKYFRVASKDLQELDDSTQLPLLCHFSETAEGLTTIRAFRHEARFKQRMLELTDTNNIAYLFLSAANRWLEVRTDYLGACIVLTASIASISRPFNSGLVGLGLLYALTITNYLNWVVRNLADLEVQMGAVKKVNSFLSMESENYEGTMDPSQVPEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSSXVDAGLVLVFSEGILVECDSGPNLLTHKNGLFSTLVMTNK
SIO_010081: Abcc9
subclass of: SO_0000673
so part of: Abcc9
location: join(2700735..2700876,2704966..2705107,2707760..2707881,2709695..2709861,2711710..2711952,2713880..2714074,2716147..2716299,2717740..2717895,2718928..2719062,2720859..2721021,2723629..2723669,2724508..2724650,2730910..2731018,2735803..2735907,2739626..2739698,2741368..2741473,2747562..2747663,2748769..2748853,2749617..2749697,2750528..2750665,2750764..2750889,2752810..2752906,2753313..2753542,2754402..2754550,2755299..2755368,2756067..2756224,2757449..2757541,2761307..2761409,2766824..2766925,2768526..2768646,2769274..2769405,2770394..2770472,2771756..2771864,2773416..2773519,2774212..2774346,2774724..2774786,2776467..2776603)
location: region:2700735-2776603:1
so has part: feature:2700735-2700876:1:exon
so has part: feature:2704966-2705107:1:exon
so has part: feature:2707760-2707881:1:exon
so has part: feature:2709695-2709861:1:exon
so has part: feature:2711710-2711952:1:exon
so has part: feature:2713880-2714074:1:exon
so has part: feature:2716147-2716299:1:exon
so has part: feature:2717740-2717895:1:exon
so has part: feature:2718928-2719062:1:exon
so has part: feature:2720859-2721021:1:exon
so has part: feature:2723629-2723669:1:exon
so has part: feature:2724508-2724650:1:exon
so has part: feature:2730910-2731018:1:exon
so has part: feature:2735803-2735907:1:exon
so has part: feature:2739626-2739698:1:exon
so has part: feature:2741368-2741473:1:exon
so has part: feature:2747562-2747663:1:exon
so has part: feature:2748769-2748853:1:exon
so has part: feature:2749617-2749697:1:exon
so has part: feature:2750528-2750665:1:exon
so has part: feature:2750764-2750889:1:exon
so has part: feature:2752810-2752906:1:exon
so has part: feature:2753313-2753542:1:exon
so has part: feature:2754402-2754550:1:exon
so has part: feature:2755299-2755368:1:exon
so has part: feature:2756067-2756224:1:exon
so has part: feature:2757449-2757541:1:exon
so has part: feature:2761307-2761409:1:exon
so has part: feature:2766824-2766925:1:exon
so has part: feature:2768526-2768646:1:exon
so has part: feature:2769274-2769405:1:exon
so has part: feature:2770394-2770472:1:exon
so has part: feature:2771756-2771864:1:exon
so has part: feature:2773416-2773519:1:exon
so has part: feature:2774212-2774346:1:exon
so has part: feature:2774724-2774786:1:exon
so has part: feature:2776467-2776603:1:exon

XP_048191114.1
type: Protein
SIO_000068: ncbiprotein

position:2700735:1
position: 2700735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2776603:1
position: 2776603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2700735-2700876:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2704966-2705107:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2707760-2707881:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2709695-2709861:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2711710-2711952:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2713880-2714074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2716147-2716299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2717740-2717895:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2718928-2719062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2720859-2721021:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2723629-2723669:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2724508-2724650:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2730910-2731018:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2735803-2735907:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2739626-2739698:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2741368-2741473:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2747562-2747663:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2748769-2748853:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2749617-2749697:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2750528-2750665:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2750764-2750889:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2752810-2752906:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2753313-2753542:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2754402-2754550:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2755299-2755368:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2756067-2756224:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2757449-2757541:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2761307-2761409:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2766824-2766925:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2768526-2768646:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2769274-2769405:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2770394-2770472:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2771756-2771864:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2773416-2773519:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2774212-2774346:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2774724-2774786:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2776467-2776603:1:exon

Kcnj8
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Kcnj8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2786585..2796507
location: region:2786585-2796507:1
so has part: feature:2786585-2796507:1:exon
subclass of: SO_0000010

125342901
type: Gene
SIO_000068: ncbigene

position:2786585:1
position: 2786585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2796507:1
position: 2796507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2786585-2796507:1:exon

Kcnj8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Kcnj8
product: potassium inwardly rectifying channel subfamily J member 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048335227.1
SIO_010081: Kcnj8
subclass of: SO_0000673
so part of: Kcnj8
location: join(2786585..2786699,2788041..2788478,2795573..2796507)
location: region:2786585-2796507:1
so has part: feature:2786585-2786699:1:exon
so has part: feature:2788041-2788478:1:exon
so has part: feature:2795573-2796507:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2786585-2786699:1:exon

position:2786699:1
position: 2786699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2788041-2788478:1:exon

position:2788041:1
position: 2788041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2788478:1
position: 2788478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2795573-2796507:1:exon

position:2795573:1
position: 2795573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Kcnj8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Kcnj8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-sensitive inward rectifier potassium channel 8
translation: MLARKSIIPEEYVLARIAAENLRRPRVRDRLARARFIAKSGACNLAHKNIREQGRFLQDIFTTLVDLKWRHTLVIFTMAFLCSWLLFAIMWWLVAFAHGDLHAYMERAAERGPEPTACVTNVRSFASAFLFSIEVQVTIGFGGRMMTEECPLAITVLILQNIVGLIINAVMLGCIFMKTAQAHRRAETLIFSRHAVIAVRNGRLCFMFRVGDLRKSMIISASVRIQVVKKTTTPEGEVVPIHQVDIPVDNPMDSNNVFLVAPLIICHVIDKRSPLYDVSANDLATQDLEVIVILEGVVETTGITTQARTSYVAEEIQWGHRFVSIVTEEEGVYSVDYSKFGNTVKVAAPRCSARELDDKPSILIQTLQKSELSHQNSLRKRNSMRRNNSMRRSNNSLRRTHAPLLVPKVQFVTPEGGQGPTES
SIO_010081: Kcnj8
subclass of: SO_0000673
so part of: Kcnj8
location: join(2788111..2788478,2795573..2796476)
location: region:2788111-2796476:1
so has part: feature:2788111-2788478:1:exon
so has part: feature:2795573-2796476:1:exon

XP_048191184.1
type: Protein
SIO_000068: ncbiprotein

position:2788111:1
position: 2788111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2796476:1
position: 2796476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2788111-2788478:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2795573-2796476:1:exon

Ldhb
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ldhb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2825042..2836764
location: region:2825042-2836764:1
so has part: feature:2825042-2836764:1:exon
subclass of: SO_0000010

125342886
type: Gene
SIO_000068: ncbigene

position:2825042:1
position: 2825042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2836764:1
position: 2836764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2825042-2836764:1:exon

Ldhb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ldhb
product: lactate dehydrogenase B
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048335207.1
SIO_010081: Ldhb
subclass of: SO_0000673
so part of: Ldhb
location: join(2825042..2825101,2828550..2828701,2831294..2831411,2831766..2831939,2833831..2834004,2834338..2834455,2835466..2835589,2836438..2836764)
location: region:2825042-2836764:1
so has part: feature:2825042-2825101:1:exon
so has part: feature:2828550-2828701:1:exon
so has part: feature:2831294-2831411:1:exon
so has part: feature:2831766-2831939:1:exon
so has part: feature:2833831-2834004:1:exon
so has part: feature:2834338-2834455:1:exon
so has part: feature:2835466-2835589:1:exon
so has part: feature:2836438-2836764:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2825042-2825101:1:exon

position:2825101:1
position: 2825101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2828550-2828701:1:exon

position:2828550:1
position: 2828550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2828701:1
position: 2828701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2831294-2831411:1:exon

position:2831294:1
position: 2831294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2831411:1
position: 2831411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2831766-2831939:1:exon

position:2831766:1
position: 2831766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2831939:1
position: 2831939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2833831-2834004:1:exon

position:2833831:1
position: 2833831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2834004:1
position: 2834004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2834338-2834455:1:exon

position:2834338:1
position: 2834338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2834455:1
position: 2834455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2835466-2835589:1:exon

position:2835466:1
position: 2835466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2835589:1
position: 2835589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2836438-2836764:1:exon

position:2836438:1
position: 2836438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ldhb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ldhb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: L-lactate dehydrogenase B chain
translation: MATLKEKLIAPVAEEEAPVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTSKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCTIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLGIHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAYEVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARGLTSVINQKLKDEEVAQLKHSADTLWAIQKDLKDL
SIO_010081: Ldhb
subclass of: SO_0000673
so part of: Ldhb
location: join(2828573..2828701,2831294..2831411,2831766..2831939,2833831..2834004,2834338..2834455,2835466..2835589,2836438..2836605)
location: region:2828573-2836605:1
so has part: feature:2828573-2828701:1:exon
so has part: feature:2831294-2831411:1:exon
so has part: feature:2831766-2831939:1:exon
so has part: feature:2833831-2834004:1:exon
so has part: feature:2834338-2834455:1:exon
so has part: feature:2835466-2835589:1:exon
so has part: feature:2836438-2836605:1:exon

XP_048191164.1
type: Protein
SIO_000068: ncbiprotein

position:2828573:1
position: 2828573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2836605:1
position: 2836605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2828573-2828701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2831294-2831411:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2831766-2831939:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2833831-2834004:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2834338-2834455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2835466-2835589:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2836438-2836605:1:exon

Gys2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Gys2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2840626..2858284
location: region:2840626-2858284:1
so has part: feature:2840626-2858284:1:exon
subclass of: SO_0000010

125342859
type: Gene
SIO_000068: ncbigene

position:2840626:1
position: 2840626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2858284:1
position: 2858284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2840626-2858284:1:exon

Gys2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Gys2
product: glycogen synthase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335174.1
SIO_010081: Gys2
subclass of: SO_0000673
so part of: Gys2
location: join(2840626..2840746,2842895..2843076,2844063..2844254,2845353..2845535,2848470..2848614,2849109..2849226,2849650..2849770,2850711..2850817,2851502..2851561,2852045..2852123,2852870..2852983,2854285..2854411,2855025..2855120,2856212..2856375,2857593..2857673,2858078..2858284)
location: region:2840626-2858284:1
so has part: feature:2840626-2840746:1:exon
so has part: feature:2842895-2843076:1:exon
so has part: feature:2844063-2844254:1:exon
so has part: feature:2845353-2845535:1:exon
so has part: feature:2848470-2848614:1:exon
so has part: feature:2849109-2849226:1:exon
so has part: feature:2849650-2849770:1:exon
so has part: feature:2850711-2850817:1:exon
so has part: feature:2851502-2851561:1:exon
so has part: feature:2852045-2852123:1:exon
so has part: feature:2852870-2852983:1:exon
so has part: feature:2854285-2854411:1:exon
so has part: feature:2855025-2855120:1:exon
so has part: feature:2856212-2856375:1:exon
so has part: feature:2857593-2857673:1:exon
so has part: feature:2858078-2858284:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2840626-2840746:1:exon

position:2840746:1
position: 2840746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2842895-2843076:1:exon

position:2842895:1
position: 2842895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2843076:1
position: 2843076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2844063-2844254:1:exon

position:2844063:1
position: 2844063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2844254:1
position: 2844254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2845353-2845535:1:exon

position:2845353:1
position: 2845353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2845535:1
position: 2845535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2848470-2848614:1:exon

position:2848470:1
position: 2848470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2848614:1
position: 2848614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2849109-2849226:1:exon

position:2849109:1
position: 2849109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2849226:1
position: 2849226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2849650-2849770:1:exon

position:2849650:1
position: 2849650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2849770:1
position: 2849770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2850711-2850817:1:exon

position:2850711:1
position: 2850711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2850817:1
position: 2850817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2851502-2851561:1:exon

position:2851502:1
position: 2851502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2851561:1
position: 2851561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2852045-2852123:1:exon

position:2852045:1
position: 2852045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2852123:1
position: 2852123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2852870-2852983:1:exon

position:2852870:1
position: 2852870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2852983:1
position: 2852983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2854285-2854411:1:exon

position:2854285:1
position: 2854285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2854411:1
position: 2854411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2855025-2855120:1:exon

position:2855025:1
position: 2855025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2855120:1
position: 2855120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2856212-2856375:1:exon

position:2856212:1
position: 2856212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2856375:1
position: 2856375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2857593-2857673:1:exon

position:2857593:1
position: 2857593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2857673:1
position: 2857673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2858078-2858284:1:exon

position:2858078:1
position: 2858078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gys2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Gys2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycogen [starch] synthase, liver
translation: MHRGRSLSVTSLGGFPQWDLARLPVEELLLFEVSWEVTNKVGGIYTVIQTKAKTTVDEWGENYFLIGPYFEHNMKTQVEPCEPLNDTVAGAMEAMNKHGCQVHFGRWLVAGSPYVVLFDLGASAGRLDGWKADFWEACGVGLPPGDREAHDALLLGSLTAWFLQEVTARAGARRVVAHFHEWQAGAGLVLSRARGLPLGSVFTTHATLLGRHLCAANADFYNRLQQFDIDKEAGERQIYHRYCMERASVHCAHVFTTVSEITATEAEHILKRKPDVVTPNGLSVKKFSALHEFQNLHVMYKARIQDFVRGHFYGHLDFDLEKTLFLFIAGRYEFSNKGADILLESLSRLNFLLRLHKSNVTVVVFFIMPAKTNNFNVETLKGQAVRKQLWDTAHAMKEKFGKKLYDALLRGEIPDMNTILDRDDVTIMKRAIFSTQRQALPPVTTHNMLDDSTDPILSTIRRIGLFNHRSDRVKVIVHPEFLSSTSPLLPMDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMQEHVADPAAYGIYIVDRRFCSPDESCNQLTQFLYGFCKQSRRQRIIQRNRTERLSDLLDWRYLGRYYQHARHLALSRAFPEQFHVEPLSPPTTEGFKFPRPSSVPPSPSVSQASSPVSSEAEDENEEERYDEEEEAERDRVNIKSPFSQGKKKLHGEYKN
SIO_010081: Gys2
subclass of: SO_0000673
so part of: Gys2
location: join(2840626..2840746,2842895..2843076,2844063..2844254,2845353..2845535,2848470..2848614,2849109..2849226,2849650..2849770,2850711..2850817,2851502..2851561,2852045..2852123,2852870..2852983,2854285..2854411,2855025..2855120,2856212..2856375,2857593..2857673,2858078..2858284)
location: region:2840626-2858284:1
so has part: feature:2840626-2840746:1:exon
so has part: feature:2842895-2843076:1:exon
so has part: feature:2844063-2844254:1:exon
so has part: feature:2845353-2845535:1:exon
so has part: feature:2848470-2848614:1:exon
so has part: feature:2849109-2849226:1:exon
so has part: feature:2849650-2849770:1:exon
so has part: feature:2850711-2850817:1:exon
so has part: feature:2851502-2851561:1:exon
so has part: feature:2852045-2852123:1:exon
so has part: feature:2852870-2852983:1:exon
so has part: feature:2854285-2854411:1:exon
so has part: feature:2855025-2855120:1:exon
so has part: feature:2856212-2856375:1:exon
so has part: feature:2857593-2857673:1:exon
so has part: feature:2858078-2858284:1:exon

XP_048191131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2840626-2840746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2842895-2843076:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2844063-2844254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2845353-2845535:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2848470-2848614:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2849109-2849226:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2849650-2849770:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2850711-2850817:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2851502-2851561:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2852045-2852123:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2852870-2852983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2854285-2854411:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2855025-2855120:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2856212-2856375:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2857593-2857673:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2858078-2858284:1:exon

Spx
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Spx
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2860341..2864443)
location: region:2860341-2864443:-1
so has part: feature:2860341-2864443:-1:exon
subclass of: SO_0000010

125342729
type: Gene
SIO_000068: ncbigene

position:2860341:-1
position: 2860341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2864443:-1
position: 2864443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2860341-2864443:-1:exon

Spx
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Spx
product: spexin hormone
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335043.1
SIO_010081: Spx
subclass of: SO_0000673
so part of: Spx
location: complement(join(2860341..2860530,2861953..2862039,2862891..2862953,2863818..2863875,2863989..2864069,2864438..2864443))
location: region:2860341-2864443:-1
so has part: feature:2864438-2864443:-1:exon
so has part: feature:2863989-2864069:-1:exon
so has part: feature:2863818-2863875:-1:exon
so has part: feature:2862891-2862953:-1:exon
so has part: feature:2861953-2862039:-1:exon
so has part: feature:2860341-2860530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2864438-2864443:-1:exon

position:2864438:-1
position: 2864438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2863989-2864069:-1:exon

position:2863989:-1
position: 2863989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2864069:-1
position: 2864069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2863818-2863875:-1:exon

position:2863818:-1
position: 2863818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2863875:-1
position: 2863875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2862891-2862953:-1:exon

position:2862891:-1
position: 2862891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2862953:-1
position: 2862953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2861953-2862039:-1:exon

position:2861953:-1
position: 2861953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2862039:-1
position: 2862039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2860341-2860530:-1:exon

position:2860530:-1
position: 2860530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Spx
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Spx
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spexin
translation: MKGPRNLRAALLALLLATSALGDIGRTPKRLAERRNWTPQAMLYLKGAQGRRFIWDHSQRKGVSEQPPPEKRSSKPQPLLPETTALLLALLKKLQDATDGEENFNQRRFLEDRLLTW
SIO_010081: Spx
subclass of: SO_0000673
so part of: Spx
location: complement(join(2860472..2860530,2861953..2862039,2862891..2862953,2863818..2863875,2863989..2864069,2864438..2864443))
location: region:2860472-2864443:-1
so has part: feature:2864438-2864443:-1:exon
so has part: feature:2863989-2864069:-1:exon
so has part: feature:2863818-2863875:-1:exon
so has part: feature:2862891-2862953:-1:exon
so has part: feature:2861953-2862039:-1:exon
so has part: feature:2860472-2860530:-1:exon

XP_048191000.1
type: Protein
SIO_000068: ncbiprotein

position:2860472:-1
position: 2860472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2864438-2864443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2863989-2864069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2863818-2863875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2862891-2862953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2861953-2862039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2860472-2860530:-1:exon

Golt1b
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Golt1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2870363..2880613)
location: region:2870363-2880613:-1
so has part: feature:2870363-2880613:-1:exon
subclass of: SO_0000010

125342893
type: Gene
SIO_000068: ncbigene

position:2870363:-1
position: 2870363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2880613:-1
position: 2880613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2870363-2880613:-1:exon

Golt1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Golt1b
product: golgi transport 1B
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048335218.1
SIO_010081: Golt1b
subclass of: SO_0000673
so part of: Golt1b
location: complement(join(2870363..2871823,2874227..2874308,2875556..2875734,2877211..2877302,2880468..2880613))
location: region:2870363-2880613:-1
so has part: feature:2880468-2880613:-1:exon
so has part: feature:2877211-2877302:-1:exon
so has part: feature:2875556-2875734:-1:exon
so has part: feature:2874227-2874308:-1:exon
so has part: feature:2870363-2871823:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2880468-2880613:-1:exon

position:2880468:-1
position: 2880468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2877211-2877302:-1:exon

position:2877211:-1
position: 2877211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2877302:-1
position: 2877302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2875556-2875734:-1:exon

position:2875556:-1
position: 2875556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2875734:-1
position: 2875734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2874227-2874308:-1:exon

position:2874227:-1
position: 2874227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2874308:-1
position: 2874308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2870363-2871823:-1:exon

position:2871823:-1
position: 2871823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Golt1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Golt1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle transport protein GOT1B
translation: MISLTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLVGWPLIGMIFEIYGFFLLFRGFFPVVIGFIRRVPVLGSLLNLPGIRSFVDKMGESNNMV
SIO_010081: Golt1b
subclass of: SO_0000673
so part of: Golt1b
location: complement(join(2871785..2871823,2874227..2874308,2875556..2875734,2877211..2877302,2880468..2880492))
location: region:2871785-2880492:-1
so has part: feature:2880468-2880492:-1:exon
so has part: feature:2877211-2877302:-1:exon
so has part: feature:2875556-2875734:-1:exon
so has part: feature:2874227-2874308:-1:exon
so has part: feature:2871785-2871823:-1:exon

XP_048191175.1
type: Protein
SIO_000068: ncbiprotein

position:2871785:-1
position: 2871785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2880492:-1
position: 2880492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2880468-2880492:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2877211-2877302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2875556-2875734:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2874227-2874308:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2871785-2871823:-1:exon

Recql
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Recql
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2882390..2895537
location: region:2882390-2895537:1
so has part: feature:2882390-2895537:1:exon
subclass of: SO_0000010

125342891
type: Gene
SIO_000068: ncbigene

position:2882390:1
position: 2882390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2895537:1
position: 2895537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2882390-2895537:1:exon

Recql
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Recql
product: RecQ like helicase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048335215.1
SIO_010081: Recql
subclass of: SO_0000673
so part of: Recql
location: join(2882390..2882435,2884115..2884161,2884668..2884865,2885307..2885486,2885801..2885907,2887865..2888063,2888915..2889081,2889390..2889471,2890537..2890685,2890765..2890882,2891339..2891477,2891800..2891891,2892412..2892631,2893810..2893936,2895213..2895537)
location: region:2882390-2895537:1
so has part: feature:2882390-2882435:1:exon
so has part: feature:2884115-2884161:1:exon
so has part: feature:2884668-2884865:1:exon
so has part: feature:2885307-2885486:1:exon
so has part: feature:2885801-2885907:1:exon
so has part: feature:2887865-2888063:1:exon
so has part: feature:2888915-2889081:1:exon
so has part: feature:2889390-2889471:1:exon
so has part: feature:2890537-2890685:1:exon
so has part: feature:2890765-2890882:1:exon
so has part: feature:2891339-2891477:1:exon
so has part: feature:2891800-2891891:1:exon
so has part: feature:2892412-2892631:1:exon
so has part: feature:2893810-2893936:1:exon
so has part: feature:2895213-2895537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2882390-2882435:1:exon

position:2882435:1
position: 2882435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2884115-2884161:1:exon

position:2884115:1
position: 2884115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2884161:1
position: 2884161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2884668-2884865:1:exon

position:2884668:1
position: 2884668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2884865:1
position: 2884865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2885307-2885486:1:exon

position:2885307:1
position: 2885307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2885486:1
position: 2885486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2885801-2885907:1:exon

position:2885801:1
position: 2885801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2885907:1
position: 2885907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2887865-2888063:1:exon

position:2887865:1
position: 2887865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2888063:1
position: 2888063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2888915-2889081:1:exon

position:2888915:1
position: 2888915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2889081:1
position: 2889081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2889390-2889471:1:exon

position:2889390:1
position: 2889390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2889471:1
position: 2889471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2890537-2890685:1:exon

position:2890537:1
position: 2890537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2890685:1
position: 2890685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2890765-2890882:1:exon

position:2890765:1
position: 2890765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2890882:1
position: 2890882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2891339-2891477:1:exon

position:2891339:1
position: 2891339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2891477:1
position: 2891477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2891800-2891891:1:exon

position:2891800:1
position: 2891800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2891891:1
position: 2891891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2892412-2892631:1:exon

position:2892412:1
position: 2892412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2892631:1
position: 2892631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2893810-2893936:1:exon

position:2893810:1
position: 2893810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2893936:1
position: 2893936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2895213-2895537:1:exon

position:2895213:1
position: 2895213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Recql
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Recql
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent DNA helicase Q1
translation: MASLSALTEELDSVTSELHAIDLQIQELTERQQELLQKKSVLTKKIKQCFQDSEARASSECESAPAEWNKEDFPWSSKVQDVLKNVFKLQKFRPLQLETINVTMAGKEIFLLMPTGGGKSLCYQLPALCSEGFTLVICPLISLMEDQLMVLKQLGVSAAMLNASSPKEHVKWVHAEMVNKNSKLKLIYVTPEKIAKSKMFMSRLEKAYEAKRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPNTSLMGLTATATQHVLKDAQKILCVQNCLTFTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIVYCFSQKDSEQLTISLHKLGIRAGTYHANMEAEEKTKVHTRWAANQLQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDRRADCILYFGFGDIFRISSMVVMENVGQQKLYEMVAYCLNISTCRRVCIAQHFDEVWNSDACDKMCDNCCKDIALEERNVAEHGRELVRILRQAEELGEKLTPLKLLDSWVGKGPAKLRVPGVVAPTLPREELEKIIAHLLLQHYLREDYSFTAYATIAYLKVGPKANLLSSKAHVIAMPVKASAGCLRAESSKTCLSERAGEMGEKTSGSFQKSPAHKLQQSASKSTGAKKRKLDDG
SIO_010081: Recql
subclass of: SO_0000673
so part of: Recql
location: join(2884146..2884161,2884668..2884865,2885307..2885486,2885801..2885907,2887865..2888063,2888915..2889081,2889390..2889471,2890537..2890685,2890765..2890882,2891339..2891477,2891800..2891891,2892412..2892631,2893810..2893936,2895213..2895362)
location: region:2884146-2895362:1
so has part: feature:2884146-2884161:1:exon
so has part: feature:2884668-2884865:1:exon
so has part: feature:2885307-2885486:1:exon
so has part: feature:2885801-2885907:1:exon
so has part: feature:2887865-2888063:1:exon
so has part: feature:2888915-2889081:1:exon
so has part: feature:2889390-2889471:1:exon
so has part: feature:2890537-2890685:1:exon
so has part: feature:2890765-2890882:1:exon
so has part: feature:2891339-2891477:1:exon
so has part: feature:2891800-2891891:1:exon
so has part: feature:2892412-2892631:1:exon
so has part: feature:2893810-2893936:1:exon
so has part: feature:2895213-2895362:1:exon

XP_048191172.1
type: Protein
SIO_000068: ncbiprotein

position:2884146:1
position: 2884146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2895362:1
position: 2895362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2884146-2884161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2884668-2884865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2885307-2885486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2885801-2885907:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2887865-2888063:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2888915-2889081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2889390-2889471:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2890537-2890685:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2890765-2890882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2891339-2891477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2891800-2891891:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2892412-2892631:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2893810-2893936:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2895213-2895362:1:exon

Pyroxd1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Pyroxd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2896131..2907331)
location: region:2896131-2907331:-1
so has part: feature:2896131-2907331:-1:exon
subclass of: SO_0000010

125342863
type: Gene
SIO_000068: ncbigene

position:2896131:-1
position: 2896131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2907331:-1
position: 2907331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2896131-2907331:-1:exon

Pyroxd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pyroxd1
product: pyridine nucleotide-disulphide oxidoreductase domain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048335178.1
SIO_010081: Pyroxd1
subclass of: SO_0000673
so part of: Pyroxd1
location: complement(join(2896131..2896943,2897542..2897679,2897982..2898104,2898589..2898701,2899491..2899611,2899833..2899933,2901166..2901326,2902121..2902194,2902782..2902910,2903155..2903274,2905256..2905336,2907175..2907331))
location: region:2896131-2907331:-1
so has part: feature:2907175-2907331:-1:exon
so has part: feature:2905256-2905336:-1:exon
so has part: feature:2903155-2903274:-1:exon
so has part: feature:2902782-2902910:-1:exon
so has part: feature:2902121-2902194:-1:exon
so has part: feature:2901166-2901326:-1:exon
so has part: feature:2899833-2899933:-1:exon
so has part: feature:2899491-2899611:-1:exon
so has part: feature:2898589-2898701:-1:exon
so has part: feature:2897982-2898104:-1:exon
so has part: feature:2897542-2897679:-1:exon
so has part: feature:2896131-2896943:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2907175-2907331:-1:exon

position:2907175:-1
position: 2907175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2905256-2905336:-1:exon

position:2905256:-1
position: 2905256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2905336:-1
position: 2905336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2903155-2903274:-1:exon

position:2903155:-1
position: 2903155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2903274:-1
position: 2903274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2902782-2902910:-1:exon

position:2902782:-1
position: 2902782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2902910:-1
position: 2902910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2902121-2902194:-1:exon

position:2902121:-1
position: 2902121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2902194:-1
position: 2902194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2901166-2901326:-1:exon

position:2901166:-1
position: 2901166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2901326:-1
position: 2901326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2899833-2899933:-1:exon

position:2899833:-1
position: 2899833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2899933:-1
position: 2899933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2899491-2899611:-1:exon

position:2899491:-1
position: 2899491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2899611:-1
position: 2899611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2898589-2898701:-1:exon

position:2898589:-1
position: 2898589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2898701:-1
position: 2898701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2897982-2898104:-1:exon

position:2897982:-1
position: 2897982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2898104:-1
position: 2898104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2897542-2897679:-1:exon

position:2897542:-1
position: 2897542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2897679:-1
position: 2897679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2896131-2896943:-1:exon

position:2896943:-1
position: 2896943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pyroxd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pyroxd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1
translation: MDATRPPAAAATTATAVAGKLVVVGGGIAGVTCAEQLAVNFPSEEILLITASPVIKAVTNFKQVSKILEEFDVEEQPSATLEKRFPNITIVESAVKELKSEERCVLTEDGGRHAYKKLCLCAGAKPKLICEGNPYVLGIRDTDSAQQFQKRLTNAKRIVVVGNGGIALELVYEVEGCEIIWVIKDKAIGNTFFDSGAAEFLTSKLRSGKPEAKLVQKRTRYTTEGTGKKAHKKAIADNTGSALGPDWHEGLALKGTREGSRDVHIETLCEVQQISLQEELRATGKKPLPFPGAKCADADAWPVYVELTNGKIYGCDFIISATGVLPNTEPFLRGNKFALGEDGGLRVDERMRTSLPDVYAAGDICTASWPPSPVWQQMRLWTQARQMGWYAAKCIAAGILGDPIDMDFSFELFAHVTKFFNYKVVLLGKYNAQGLGTDHELLLRCTQGLEYVKAVLQNGRLVGAVLIGETDLEETFENLILNQMDLSPYGEDLLDPNIDIEDYFD
SIO_010081: Pyroxd1
subclass of: SO_0000673
so part of: Pyroxd1
location: complement(join(2896695..2896943,2897542..2897679,2897982..2898104,2898589..2898701,2899491..2899611,2899833..2899933,2901166..2901326,2902121..2902194,2902782..2902910,2903155..2903274,2905256..2905336,2907175..2907282))
location: region:2896695-2907282:-1
so has part: feature:2907175-2907282:-1:exon
so has part: feature:2905256-2905336:-1:exon
so has part: feature:2903155-2903274:-1:exon
so has part: feature:2902782-2902910:-1:exon
so has part: feature:2902121-2902194:-1:exon
so has part: feature:2901166-2901326:-1:exon
so has part: feature:2899833-2899933:-1:exon
so has part: feature:2899491-2899611:-1:exon
so has part: feature:2898589-2898701:-1:exon
so has part: feature:2897982-2898104:-1:exon
so has part: feature:2897542-2897679:-1:exon
so has part: feature:2896695-2896943:-1:exon

XP_048191135.1
type: Protein
SIO_000068: ncbiprotein

position:2896695:-1
position: 2896695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2907282:-1
position: 2907282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2907175-2907282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2905256-2905336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2903155-2903274:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2902782-2902910:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2902121-2902194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2901166-2901326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2899833-2899933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2899491-2899611:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2898589-2898701:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2897982-2898104:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2897542-2897679:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2896695-2896943:-1:exon

LOC125342730
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2917907..2924580
location: region:2917907-2924580:1
so has part: feature:2917907-2924580:1:exon

125342730
type: Gene
SIO_000068: ncbigene

position:2917907:1
position: 2917907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2924580:1
position: 2924580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2917907-2924580:1:exon

LOC125342730
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342730
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342730
subclass of: SO_0000673
so part of: LOC125342730
location: 2917907..2917987
location: region:2917907-2917987:1
so has part: feature:2917907-2917987:1:exon

position:2917987:1
position: 2917987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2917907-2917987:1:exon

LOC125342730
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342730
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342730
subclass of: SO_0000673
so part of: LOC125342730
location: 2924361..2924580
location: region:2924361-2924580:1
so has part: feature:2924361-2924580:1:exon

position:2924361:1
position: 2924361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2924361-2924580:1:exon

LOC125342731
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342731
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2925320..2930947)
location: region:2925320-2930947:-1
so has part: feature:2925320-2930947:-1:exon
subclass of: SO_0000010

125342731
type: Gene
SIO_000068: ncbigene

position:2925320:-1
position: 2925320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2930947:-1
position: 2930947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2925320-2930947:-1:exon

LOC125342731
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342731
product: islet amyloid polypeptide
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335044.1
SIO_010081: LOC125342731
subclass of: SO_0000673
so part of: LOC125342731
location: complement(join(2925320..2925397,2928213..2928378,2930875..2930947))
location: region:2925320-2930947:-1
so has part: feature:2930875-2930947:-1:exon
so has part: feature:2928213-2928378:-1:exon
so has part: feature:2925320-2925397:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2930875-2930947:-1:exon

position:2930875:-1
position: 2930875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2928213-2928378:-1:exon

position:2928213:-1
position: 2928213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2928378:-1
position: 2928378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2925320-2925397:-1:exon

position:2925397:-1
position: 2925397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125342731
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342731
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: islet amyloid polypeptide
translation: MSALKLPVVLLVLSVTFNHLRATPTGQRMDKQVDKRACNTATCXTHRLANFLVRSSHNLGAVPPPTNVGSNTYGKRSGAGSICMQQAPMHTGEMKIFTNNGQANE
SIO_010081: LOC125342731
subclass of: SO_0000673
so part of: LOC125342731
location: complement(join(2925320..2925397,2928213..2928378,2930875..2930947))
location: region:2925320-2930947:-1
so has part: feature:2930875-2930947:-1:exon
so has part: feature:2928213-2928378:-1:exon
so has part: feature:2925320-2925397:-1:exon

XP_048191001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2930875-2930947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2928213-2928378:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2925320-2925397:-1:exon

Slco1a2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Slco1a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2938644..2965530
location: region:2938644-2965530:1
so has part: feature:2938644-2965530:1:exon
subclass of: SO_0000010

125342864
type: Gene
SIO_000068: ncbigene

position:2938644:1
position: 2938644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2965530:1
position: 2965530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2938644-2965530:1:exon

Slco1a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slco1a2
product: solute carrier organic anion transporter family member 1A2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335180.1
SIO_010081: Slco1a2
subclass of: SO_0000673
so part of: Slco1a2
location: join(2938644..2938923,2943907..2944028,2945667..2945808,2947146..2947278,2950714..2950820,2953680..2953826,2955222..2955320,2956199..2956417,2956972..2957136,2958530..2958725,2959454..2959619,2960128..2960300,2962637..2962701,2963821..2963938,2965282..2965530)
location: region:2938644-2965530:1
so has part: feature:2938644-2938923:1:exon
so has part: feature:2943907-2944028:1:exon
so has part: feature:2945667-2945808:1:exon
so has part: feature:2947146-2947278:1:exon
so has part: feature:2950714-2950820:1:exon
so has part: feature:2953680-2953826:1:exon
so has part: feature:2955222-2955320:1:exon
so has part: feature:2956199-2956417:1:exon
so has part: feature:2956972-2957136:1:exon
so has part: feature:2958530-2958725:1:exon
so has part: feature:2959454-2959619:1:exon
so has part: feature:2960128-2960300:1:exon
so has part: feature:2962637-2962701:1:exon
so has part: feature:2963821-2963938:1:exon
so has part: feature:2965282-2965530:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2938644-2938923:1:exon

position:2938923:1
position: 2938923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2943907-2944028:1:exon

position:2943907:1
position: 2943907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2944028:1
position: 2944028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2945667-2945808:1:exon

position:2945667:1
position: 2945667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2945808:1
position: 2945808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2947146-2947278:1:exon

position:2947146:1
position: 2947146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2947278:1
position: 2947278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2950714-2950820:1:exon

position:2950714:1
position: 2950714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2950820:1
position: 2950820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2953680-2953826:1:exon

position:2953680:1
position: 2953680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2953826:1
position: 2953826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2955222-2955320:1:exon

position:2955222:1
position: 2955222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2955320:1
position: 2955320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2956199-2956417:1:exon

position:2956199:1
position: 2956199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2956417:1
position: 2956417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2956972-2957136:1:exon

position:2956972:1
position: 2956972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2957136:1
position: 2957136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2958530-2958725:1:exon

position:2958530:1
position: 2958530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2958725:1
position: 2958725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2959454-2959619:1:exon

position:2959454:1
position: 2959454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2959619:1
position: 2959619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2960128-2960300:1:exon

position:2960128:1
position: 2960128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2960300:1
position: 2960300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2962637-2962701:1:exon

position:2962637:1
position: 2962637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2962701:1
position: 2962701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2963821-2963938:1:exon

position:2963821:1
position: 2963821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2963938:1
position: 2963938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2965282-2965530:1:exon

position:2965282:1
position: 2965282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slco1a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slco1a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier organic anion transporter family member 1A2
translation: MGETEKRREAQRMKCFSKVKMFLLALTWAYVSKTLSGSYMNSMLTQIERQFNIPTSLVGFINGSFEIGNLLLIIFVSYFGTKLHRPVMIGVGCVVMGLGCFLISLPHFLMDRYEYESTVSTSSNLSSDSFLCTENRTQPLKPTHDPTECQDEARSLQWVLVLAGNIVRGMGETPIMPLGISYVEDHARPEDSPLYIGFIETGAIIGPLIGLLLASFCANIYVDTGSVDTADLTISPTDTRWVGAWWLGFLICAVVNICTAIPFFFLPKSLPKEGLEENTEAVKNDKEKQSEVVTKDNQGITKDFLPFMKSLACNPIYMLFILISVLQFNAFVNMFSFMPKYLEQHYGKSTSDAIFLIGIYNLPPICVGYVVGGFIMKKFKITVKQAAHIACWLSILEYLLYFFTFLMTCDNSSVAGITTSYEGNPQDLDMGNEVLATCNAQCSCPTKIWDPVCGDNSRSYMSACLAGCETSVGTGVNMIFHNCTCIQPSGNASAMLGLCDKGPECSRMLQYFLIQSTLSSFIYSLAAIPGYMVLLRCIKSEEKSLGVGWHTFSMRVFAGIPAPIYFGALIDSTCLRWGSGKCAKPGACRMYDSNKFRHIYLGMPAAIRGLSFLPAFVILILLRNRKLPGETDSPIAELADLKAVEKENEGKDLHPNAKVLNDGELKTKL
SIO_010081: Slco1a2
subclass of: SO_0000673
so part of: Slco1a2
location: join(2943969..2944028,2945667..2945808,2947146..2947278,2950714..2950820,2953680..2953826,2955222..2955320,2956199..2956417,2956972..2957136,2958530..2958725,2959454..2959619,2960128..2960300,2962637..2962701,2963821..2963938,2965282..2965501)
location: region:2943969-2965501:1
so has part: feature:2943969-2944028:1:exon
so has part: feature:2945667-2945808:1:exon
so has part: feature:2947146-2947278:1:exon
so has part: feature:2950714-2950820:1:exon
so has part: feature:2953680-2953826:1:exon
so has part: feature:2955222-2955320:1:exon
so has part: feature:2956199-2956417:1:exon
so has part: feature:2956972-2957136:1:exon
so has part: feature:2958530-2958725:1:exon
so has part: feature:2959454-2959619:1:exon
so has part: feature:2960128-2960300:1:exon
so has part: feature:2962637-2962701:1:exon
so has part: feature:2963821-2963938:1:exon
so has part: feature:2965282-2965501:1:exon

XP_048191137.1
type: Protein
SIO_000068: ncbiprotein

position:2943969:1
position: 2943969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2965501:1
position: 2965501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2943969-2944028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2945667-2945808:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2947146-2947278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2950714-2950820:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2953680-2953826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955222-2955320:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2956199-2956417:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2956972-2957136:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2958530-2958725:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2959454-2959619:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2960128-2960300:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2962637-2962701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2963821-2963938:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2965282-2965501:1:exon

Slco1b3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Slco1b3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2971856..2999250)
location: region:2971856-2999250:-1
so has part: feature:2971856-2999250:-1:exon
subclass of: SO_0000010

125342875
type: Gene
SIO_000068: ncbigene

position:2971856:-1
position: 2971856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2999250:-1
position: 2999250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971856-2999250:-1:exon

Slco1b3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slco1b3
product: solute carrier organic anion transporter family member 1B3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335199.1
SIO_010081: Slco1b3
subclass of: SO_0000673
so part of: Slco1b3
location: complement(join(2971856..2972117,2974205..2974322,2975516..2975580,2978018..2978202,2979143..2979308,2980323..2980518,2982507..2982671,2985587..2985851,2986984..2987082,2987432..2987578,2988925..2989037,2990984..2991116,2993193..2993334,2999173..2999250))
location: region:2971856-2999250:-1
so has part: feature:2999173-2999250:-1:exon
so has part: feature:2993193-2993334:-1:exon
so has part: feature:2990984-2991116:-1:exon
so has part: feature:2988925-2989037:-1:exon
so has part: feature:2987432-2987578:-1:exon
so has part: feature:2986984-2987082:-1:exon
so has part: feature:2985587-2985851:-1:exon
so has part: feature:2982507-2982671:-1:exon
so has part: feature:2980323-2980518:-1:exon
so has part: feature:2979143-2979308:-1:exon
so has part: feature:2978018-2978202:-1:exon
so has part: feature:2975516-2975580:-1:exon
so has part: feature:2974205-2974322:-1:exon
so has part: feature:2971856-2972117:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2999173-2999250:-1:exon

position:2999173:-1
position: 2999173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2993193-2993334:-1:exon

position:2993193:-1
position: 2993193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2993334:-1
position: 2993334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2990984-2991116:-1:exon

position:2990984:-1
position: 2990984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2991116:-1
position: 2991116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2988925-2989037:-1:exon

position:2988925:-1
position: 2988925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2989037:-1
position: 2989037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2987432-2987578:-1:exon

position:2987432:-1
position: 2987432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2987578:-1
position: 2987578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2986984-2987082:-1:exon

position:2986984:-1
position: 2986984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2987082:-1
position: 2987082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2985587-2985851:-1:exon

position:2985587:-1
position: 2985587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2985851:-1
position: 2985851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2982507-2982671:-1:exon

position:2982507:-1
position: 2982507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2982671:-1
position: 2982671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2980323-2980518:-1:exon

position:2980323:-1
position: 2980323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2980518:-1
position: 2980518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2979143-2979308:-1:exon

position:2979143:-1
position: 2979143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2979308:-1
position: 2979308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2978018-2978202:-1:exon

position:2978018:-1
position: 2978018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2978202:-1
position: 2978202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2975516-2975580:-1:exon

position:2975516:-1
position: 2975516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2975580:-1
position: 2975580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2974205-2974322:-1:exon

position:2974205:-1
position: 2974205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2974322:-1
position: 2974322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2971856-2972117:-1:exon

position:2972117:-1
position: 2972117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slco1b3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slco1b3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: solute carrier organic anion transporter family member 1B3
translation: MDQNQNKKEETKSPEKRKTRRFDRFKIFLAAISFSFICKTFAGVLMKSSLTQIEKRFDISSSTSGFIDGGFEFGNLFVIVFVSYFGSKLHRPKLIGIGSLVMGTGCFLIALPHFLMGRYRYDTGTSSDPLKGAIPTCSINRTSSPSTTSPKILEKGCDRGSENYYWIYVLLGNMLRGVGETPIVPLGVSYIDDFSEEGNSSIYLGGLQAITMIGPILGFIMGSVFSRIYVDVGFVDLSSVRITTRDARWVGAWWLGFLVAGLLCILSAIPFFFLPKNPRELQAARKGSVSSAQGLKAGEETGPQAHPASQGPPEPSRCVVRTWGSGFLMSMRSILSNKLYILFLTMTLLHLSAFIGSFTYVFKYIEQQYGQPTSHANFLLGLITIPTMASGMLLGGYSIKKFKLTVVGIGKLSFCTALCAVFTHLIYFSLICEGRSVGGLTVAYDGNSSVQSHMNLSLSPCNVACGCEDRHWEPVCGDNGVTYLSPCLAGCSSDDASGNNTVFHNCTCVRASGSPNRNYSAHLGECPRSDACKMKFKIYIGVQVIYSFFLALGSPSYMMLLVRLVEPELKSLAMGFHSLVIRTLGGMLAPICFGTLIDMTCIKWSITPCGKKGTCRMYNSILFGAIYLGLQSCLKFVSLGFFATLIWAMKKKYEGKATKEMGNEEKATDEEKLDSVNKNGHFVSETHI
SIO_010081: Slco1b3
subclass of: SO_0000673
so part of: Slco1b3
location: complement(join(2971922..2972117,2974205..2974322,2975516..2975580,2978018..2978202,2979143..2979308,2980323..2980518,2982507..2982671,2985587..2985851,2986984..2987082,2987432..2987578,2988925..2989037,2990984..2991116,2993193..2993334,2999173..2999250))
location: region:2971922-2999250:-1
so has part: feature:2999173-2999250:-1:exon
so has part: feature:2993193-2993334:-1:exon
so has part: feature:2990984-2991116:-1:exon
so has part: feature:2988925-2989037:-1:exon
so has part: feature:2987432-2987578:-1:exon
so has part: feature:2986984-2987082:-1:exon
so has part: feature:2985587-2985851:-1:exon
so has part: feature:2982507-2982671:-1:exon
so has part: feature:2980323-2980518:-1:exon
so has part: feature:2979143-2979308:-1:exon
so has part: feature:2978018-2978202:-1:exon
so has part: feature:2975516-2975580:-1:exon
so has part: feature:2974205-2974322:-1:exon
so has part: feature:2971922-2972117:-1:exon

XP_048191156.1
type: Protein
SIO_000068: ncbiprotein

position:2971922:-1
position: 2971922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2999173-2999250:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2993193-2993334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2990984-2991116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2988925-2989037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2987432-2987578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2986984-2987082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2985587-2985851:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2982507-2982671:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2980323-2980518:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2979143-2979308:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2978018-2978202:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2975516-2975580:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2974205-2974322:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2971922-2972117:-1:exon

Slco1c1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Slco1c1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3017497..3035193)
location: region:3017497-3035193:-1
so has part: feature:3017497-3035193:-1:exon
subclass of: SO_0000010

125342887
type: Gene
SIO_000068: ncbigene

position:3017497:-1
position: 3017497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3035193:-1
position: 3035193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3017497-3035193:-1:exon

Slco1c1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slco1c1
product: solute carrier organic anion transporter family member 1C1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 44% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335211.1
SIO_010081: Slco1c1
subclass of: SO_0000673
so part of: Slco1c1
location: complement(join(3017497..3017719,3019454..3019571,3021022..3021086,3022068..3022252,3022586..3022751,3023847..3024042,3024373..3024537,3025642..3025887,3027567..3027662,3030971..3031095,3032702..3032834,3034078..3034219,3035065..3035193))
location: region:3017497-3035193:-1
so has part: feature:3035065-3035193:-1:exon
so has part: feature:3034078-3034219:-1:exon
so has part: feature:3032702-3032834:-1:exon
so has part: feature:3030971-3031095:-1:exon
so has part: feature:3027567-3027662:-1:exon
so has part: feature:3025642-3025887:-1:exon
so has part: feature:3024373-3024537:-1:exon
so has part: feature:3023847-3024042:-1:exon
so has part: feature:3022586-3022751:-1:exon
so has part: feature:3022068-3022252:-1:exon
so has part: feature:3021022-3021086:-1:exon
so has part: feature:3019454-3019571:-1:exon
so has part: feature:3017497-3017719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3035065-3035193:-1:exon

position:3035065:-1
position: 3035065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3034078-3034219:-1:exon

position:3034078:-1
position: 3034078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3034219:-1
position: 3034219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3032702-3032834:-1:exon

position:3032702:-1
position: 3032702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3032834:-1
position: 3032834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3030971-3031095:-1:exon

position:3030971:-1
position: 3030971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3031095:-1
position: 3031095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3027567-3027662:-1:exon

position:3027567:-1
position: 3027567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3027662:-1
position: 3027662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3025642-3025887:-1:exon

position:3025642:-1
position: 3025642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3025887:-1
position: 3025887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3024373-3024537:-1:exon

position:3024373:-1
position: 3024373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3024537:-1
position: 3024537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3023847-3024042:-1:exon

position:3023847:-1
position: 3023847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3024042:-1
position: 3024042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3022586-3022751:-1:exon

position:3022586:-1
position: 3022586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3022751:-1
position: 3022751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3022068-3022252:-1:exon

position:3022068:-1
position: 3022068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3022252:-1
position: 3022252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3021022-3021086:-1:exon

position:3021022:-1
position: 3021022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3021086:-1
position: 3021086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3019454-3019571:-1:exon

position:3019454:-1
position: 3019454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3019571:-1
position: 3019571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3017497-3017719:-1:exon

position:3017719:-1
position: 3017719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slco1c1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slco1c1
product: solute carrier organic anion transporter family member 1C1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335210.1
SIO_010081: Slco1c1
subclass of: SO_0000673
so part of: Slco1c1
location: complement(join(3017497..3017719,3019454..3019571,3021022..3021086,3022068..3022252,3022586..3022751,3023847..3024042,3024373..3024537,3025642..3025887,3027567..3027662,3028806..3028952,3030971..3031095,3032702..3032834,3034078..3034219,3035065..3035193))
location: region:3017497-3035193:-1
so has part: feature:3035065-3035193:-1:exon
so has part: feature:3034078-3034219:-1:exon
so has part: feature:3032702-3032834:-1:exon
so has part: feature:3030971-3031095:-1:exon
so has part: feature:3028806-3028952:-1:exon
so has part: feature:3027567-3027662:-1:exon
so has part: feature:3025642-3025887:-1:exon
so has part: feature:3024373-3024537:-1:exon
so has part: feature:3023847-3024042:-1:exon
so has part: feature:3022586-3022751:-1:exon
so has part: feature:3022068-3022252:-1:exon
so has part: feature:3021022-3021086:-1:exon
so has part: feature:3019454-3019571:-1:exon
so has part: feature:3017497-3017719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3035065-3035193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3034078-3034219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032702-3032834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3030971-3031095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3028806-3028952:-1:exon

position:3028806:-1
position: 3028806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3028952:-1
position: 3028952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3027567-3027662:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3025642-3025887:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3024373-3024537:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3023847-3024042:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3022586-3022751:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3022068-3022252:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3021022-3021086:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3019454-3019571:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3017497-3017719:-1:exon

Slco1c1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slco1c1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier organic anion transporter family member 1C1 isoform X2
translation: MDSPTKENIQLFSTNSTPPVARPAYKTEYPTPKEKQPYCGELKVFLGALSFVCFAKSLAQGYFKSTITQIEKRFDISSTLVGVIDGSFEMGNLLVVTLVSYFGAKLHRPKIIGAGCLVMAAGTFLIALPHFFMEPYKYGKFSSSYNESLSIDSCVLDSGGQEPSSALDKTETSIQDGCVQSVGIIGPMFGFLLGSLCAKLYVDVGVNSEHLAISPKDPQWVGAWWLGYLIAGTLSLLAAVPFWCLPKTLSRPPDQEDASSSPEKSKFIRDDPTNSQTPPGEKIKIMEMAKDFVPSLKILLGNPVFLLHIGACVFHFNSLFGMVTYKPKYIEQQYQQTSSQANFMIGLINIPAVALGMFSGGILVKKFKIGVYGAAKFSMATCVLGYLLLLSLLALGCENSAVAGLTVSYQGTKPIAPHEGSLLADCNSRCQCSETAWEPICGENGVTYMSACLAGCQASHGSGKNIILHNCSCVGLSIPEPGNSSGRMGRCQKDNGCPQRFYYFLVLSVLVSYILSLGGIPGYIIILRNIKPQLKSFAIGIYSLAIKLLAGIPAPVYFGVLIDRACLKWGSQKCGGRGSCRFYDSGLFRRIYLGLTIALGMGAVFLISSVFFLLKKNYISQPRNSAAKKELAVASARFRKERWAAKDDMLQAQYWPGKETQL
SIO_010081: Slco1c1
subclass of: SO_0000673
so part of: Slco1c1
location: complement(join(3017497..3017719,3019454..3019571,3021022..3021086,3022068..3022252,3022586..3022751,3023847..3024042,3024373..3024537,3025642..3025887,3027567..3027662,3030971..3031095,3032702..3032834,3034078..3034219,3035065..3035193))
location: region:3017497-3035193:-1
so has part: feature:3035065-3035193:-1:exon
so has part: feature:3034078-3034219:-1:exon
so has part: feature:3032702-3032834:-1:exon
so has part: feature:3030971-3031095:-1:exon
so has part: feature:3027567-3027662:-1:exon
so has part: feature:3025642-3025887:-1:exon
so has part: feature:3024373-3024537:-1:exon
so has part: feature:3023847-3024042:-1:exon
so has part: feature:3022586-3022751:-1:exon
so has part: feature:3022068-3022252:-1:exon
so has part: feature:3021022-3021086:-1:exon
so has part: feature:3019454-3019571:-1:exon
so has part: feature:3017497-3017719:-1:exon

XP_048191168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3035065-3035193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3034078-3034219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032702-3032834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3030971-3031095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3027567-3027662:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025642-3025887:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3024373-3024537:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3023847-3024042:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3022586-3022751:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3022068-3022252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3021022-3021086:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3019454-3019571:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3017497-3017719:-1:exon

Slco1c1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slco1c1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier organic anion transporter family member 1C1 isoform X1
translation: MDSPTKENIQLFSTNSTPPVARPAYKTEYPTPKEKQPYCGELKVFLGALSFVCFAKSLAQGYFKSTITQIEKRFDISSTLVGVIDGSFEMGNLLVVTLVSYFGAKLHRPKIIGAGCLVMAAGTFLIALPHFFMEPYKYGKFSSSYNESLSIDSCVLDSGGQEPSSALDKTETSIQDACTREGGHPTWVFVFLGNLLRGLGESPIQPLGIAYLDDFSRHDRAAFYIGCVQSVGIIGPMFGFLLGSLCAKLYVDVGVNSEHLAISPKDPQWVGAWWLGYLIAGTLSLLAAVPFWCLPKTLSRPPDQEDASSSPEKSKFIRDDPTNSQTPPGEKIKIMEMAKDFVPSLKILLGNPVFLLHIGACVFHFNSLFGMVTYKPKYIEQQYQQTSSQANFMIGLINIPAVALGMFSGGILVKKFKIGVYGAAKFSMATCVLGYLLLLSLLALGCENSAVAGLTVSYQGTKPIAPHEGSLLADCNSRCQCSETAWEPICGENGVTYMSACLAGCQASHGSGKNIILHNCSCVGLSIPEPGNSSGRMGRCQKDNGCPQRFYYFLVLSVLVSYILSLGGIPGYIIILRNIKPQLKSFAIGIYSLAIKLLAGIPAPVYFGVLIDRACLKWGSQKCGGRGSCRFYDSGLFRRIYLGLTIALGMGAVFLISSVFFLLKKNYISQPRNSAAKKELAVASARFRKERWAAKDDMLQAQYWPGKETQL
SIO_010081: Slco1c1
subclass of: SO_0000673
so part of: Slco1c1
location: complement(join(3017497..3017719,3019454..3019571,3021022..3021086,3022068..3022252,3022586..3022751,3023847..3024042,3024373..3024537,3025642..3025887,3027567..3027662,3028806..3028952,3030971..3031095,3032702..3032834,3034078..3034219,3035065..3035193))
location: region:3017497-3035193:-1
so has part: feature:3035065-3035193:-1:exon
so has part: feature:3034078-3034219:-1:exon
so has part: feature:3032702-3032834:-1:exon
so has part: feature:3030971-3031095:-1:exon
so has part: feature:3028806-3028952:-1:exon
so has part: feature:3027567-3027662:-1:exon
so has part: feature:3025642-3025887:-1:exon
so has part: feature:3024373-3024537:-1:exon
so has part: feature:3023847-3024042:-1:exon
so has part: feature:3022586-3022751:-1:exon
so has part: feature:3022068-3022252:-1:exon
so has part: feature:3021022-3021086:-1:exon
so has part: feature:3019454-3019571:-1:exon
so has part: feature:3017497-3017719:-1:exon

XP_048191167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3035065-3035193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3034078-3034219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032702-3032834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3030971-3031095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3028806-3028952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3027567-3027662:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3025642-3025887:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3024373-3024537:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3023847-3024042:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3022586-3022751:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3022068-3022252:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3021022-3021086:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3019454-3019571:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3017497-3017719:-1:exon

Pde3a
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Pde3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3045083..3173609)
location: region:3045083-3173609:-1
so has part: feature:3045083-3173609:-1:exon
subclass of: SO_0000010

125342842
type: Gene
SIO_000068: ncbigene

position:3045083:-1
position: 3045083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3173609:-1
position: 3173609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3045083-3173609:-1:exon

Pde3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pde3a
product: phosphodiesterase 3A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048335154.1
SIO_010081: Pde3a
subclass of: SO_0000673
so part of: Pde3a
location: complement(join(3045083..3047195,3050301..3050589,3052096..3052251,3053019..3053222,3056198..3056394,3056958..3057071,3060352..3060463,3060956..3061093,3063589..3063743,3064375..3064460,3066606..3066825,3070839..3070963,3074059..3074213,3074622..3074876,3107598..3107648,3173558..3173609))
location: region:3045083-3173609:-1
so has part: feature:3173558-3173609:-1:exon
so has part: feature:3107598-3107648:-1:exon
so has part: feature:3074622-3074876:-1:exon
so has part: feature:3074059-3074213:-1:exon
so has part: feature:3070839-3070963:-1:exon
so has part: feature:3066606-3066825:-1:exon
so has part: feature:3064375-3064460:-1:exon
so has part: feature:3063589-3063743:-1:exon
so has part: feature:3060956-3061093:-1:exon
so has part: feature:3060352-3060463:-1:exon
so has part: feature:3056958-3057071:-1:exon
so has part: feature:3056198-3056394:-1:exon
so has part: feature:3053019-3053222:-1:exon
so has part: feature:3052096-3052251:-1:exon
so has part: feature:3050301-3050589:-1:exon
so has part: feature:3045083-3047195:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3173558-3173609:-1:exon

position:3173558:-1
position: 3173558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3107598-3107648:-1:exon

position:3107598:-1
position: 3107598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3107648:-1
position: 3107648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3074622-3074876:-1:exon

position:3074622:-1
position: 3074622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3074876:-1
position: 3074876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3074059-3074213:-1:exon

position:3074059:-1
position: 3074059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3074213:-1
position: 3074213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3070839-3070963:-1:exon

position:3070839:-1
position: 3070839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3070963:-1
position: 3070963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3066606-3066825:-1:exon

position:3066606:-1
position: 3066606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3066825:-1
position: 3066825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3064375-3064460:-1:exon

position:3064375:-1
position: 3064375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3064460:-1
position: 3064460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3063589-3063743:-1:exon

position:3063589:-1
position: 3063589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3063743:-1
position: 3063743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3060956-3061093:-1:exon

position:3060956:-1
position: 3060956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3061093:-1
position: 3061093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3060352-3060463:-1:exon

position:3060352:-1
position: 3060352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3060463:-1
position: 3060463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3056958-3057071:-1:exon

position:3056958:-1
position: 3056958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3057071:-1
position: 3057071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3056198-3056394:-1:exon

position:3056198:-1
position: 3056198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3056394:-1
position: 3056394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3053019-3053222:-1:exon

position:3053019:-1
position: 3053019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3053222:-1
position: 3053222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3052096-3052251:-1:exon

position:3052096:-1
position: 3052096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3052251:-1
position: 3052251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3050301-3050589:-1:exon

position:3050301:-1
position: 3050301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3050589:-1
position: 3050589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3045083-3047195:-1:exon

position:3047195:-1
position: 3047195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pde3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pde3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cGMP-inhibited 3',5'-cyclic phosphodiesterase A
translation: MGPLEWDFKRGPRGSQSSGTSITVDIAVMGEAHGLITDLLADPSLPPSVCTSLRAVSNLLSTQLTFQALHKPRAGPLVAFSDHACSDSEDSADKDKLAVTKRLRRSLPPGLMRRVSSTWTTTTSATGLPTLEPAPVRRDHSATTKLQETPLPSAVNSDSWNNPVLMTLPKSRSFTSSYAVSAANHVKAKKQNRPGALANISPLTSSCPSPLQGSPVHSPVSKVSAQQFPEAADTTTKQGPGPHRPLTYTQSAPNLSPPALPPPSICSSCGRPYSQRNTAEGDLESGRGATLTPNRTDDTVQVTSDYDTNNNSDSSDIVQNEDEARCPREPPREAAAGSPFPAESMLFLDKPILAPEPLIMDNLGSIMDQLNTWNFPIFDLVENIGRKCGRILSQVSYRLFEDMGLFEAFKIPLREFMNYFHALEIGYRDIPYHNRVHATDVLHAVWYLTTQPIPGLAMVLSDHGAPGDADAEALARGRMGFVSSRMLGARDGRYGSLCGNIPALELMALYVAAAMHDYDHPGRTNAFLVATGAPQAVLYNDRSVLENHHAAAAWSLFMSRPEYNFLANLDHVEFKHFRFLVIEAILATDLKKHFDFVAKFNAKVNDDVGIDWTNENDRLLVCQMCIKLADINGPAKCKELHLQWTEGIVNEFYEQGDEEASLGLPISPFMDRSAPQLANLQESFISHIVGPLCNSYDSAGLMPGQWVEDSDTDDPEEEEEEEEEEEEDEEDEEEEGAATHEDKTCENSKPPGKRTFKTRRIHCQITQHLLQNHAMWRKVIEEEQRTAGAEKPCEAPAGQQPAADQIQAIEEEDEAKARTQETSAPRPAL
SIO_010081: Pde3a
subclass of: SO_0000673
so part of: Pde3a
location: complement(join(3046960..3047195,3050301..3050589,3052096..3052251,3053019..3053222,3056198..3056394,3056958..3057071,3060352..3060463,3060956..3061093,3063589..3063743,3064375..3064460,3066606..3066825,3070839..3070963,3074059..3074213,3074622..3074876,3107598..3107645))
location: region:3046960-3107645:-1
so has part: feature:3107598-3107645:-1:exon
so has part: feature:3074622-3074876:-1:exon
so has part: feature:3074059-3074213:-1:exon
so has part: feature:3070839-3070963:-1:exon
so has part: feature:3066606-3066825:-1:exon
so has part: feature:3064375-3064460:-1:exon
so has part: feature:3063589-3063743:-1:exon
so has part: feature:3060956-3061093:-1:exon
so has part: feature:3060352-3060463:-1:exon
so has part: feature:3056958-3057071:-1:exon
so has part: feature:3056198-3056394:-1:exon
so has part: feature:3053019-3053222:-1:exon
so has part: feature:3052096-3052251:-1:exon
so has part: feature:3050301-3050589:-1:exon
so has part: feature:3046960-3047195:-1:exon

XP_048191111.1
type: Protein
SIO_000068: ncbiprotein

position:3046960:-1
position: 3046960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3107645:-1
position: 3107645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3107598-3107645:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3074622-3074876:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3074059-3074213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3070839-3070963:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3066606-3066825:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3064375-3064460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3063589-3063743:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3060956-3061093:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3060352-3060463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3056958-3057071:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3056198-3056394:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3053019-3053222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3052096-3052251:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3050301-3050589:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3046960-3047195:-1:exon

Aebp2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Aebp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3304068..3324319)
location: region:3304068-3324319:-1
so has part: feature:3304068-3324319:-1:exon
subclass of: SO_0000010

125342931
type: Gene
SIO_000068: ncbigene

position:3304068:-1
position: 3304068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3324319:-1
position: 3324319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3304068-3324319:-1:exon

Aebp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Aebp2
product: AE binding protein 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048335275.1
SIO_010081: Aebp2
subclass of: SO_0000673
so part of: Aebp2
location: complement(join(3304068..3304132,3304587..3304613,3305725..3305838,3306424..3306491,3307276..3307400,3309507..3309693,3312230..3312337,3315225..3315432,3323516..3323678,3323781..3324319))
location: region:3304068-3324319:-1
so has part: feature:3323781-3324319:-1:exon
so has part: feature:3323516-3323678:-1:exon
so has part: feature:3315225-3315432:-1:exon
so has part: feature:3312230-3312337:-1:exon
so has part: feature:3309507-3309693:-1:exon
so has part: feature:3307276-3307400:-1:exon
so has part: feature:3306424-3306491:-1:exon
so has part: feature:3305725-3305838:-1:exon
so has part: feature:3304587-3304613:-1:exon
so has part: feature:3304068-3304132:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3323781-3324319:-1:exon

position:3323781:-1
position: 3323781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3323516-3323678:-1:exon

position:3323516:-1
position: 3323516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3323678:-1
position: 3323678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3315225-3315432:-1:exon

position:3315225:-1
position: 3315225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3315432:-1
position: 3315432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3312230-3312337:-1:exon

position:3312230:-1
position: 3312230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3312337:-1
position: 3312337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3309507-3309693:-1:exon

position:3309507:-1
position: 3309507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3309693:-1
position: 3309693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3307276-3307400:-1:exon

position:3307276:-1
position: 3307276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3307400:-1
position: 3307400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3306424-3306491:-1:exon

position:3306424:-1
position: 3306424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3306491:-1
position: 3306491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3305725-3305838:-1:exon

position:3305725:-1
position: 3305725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3305838:-1
position: 3305838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3304587-3304613:-1:exon

position:3304587:-1
position: 3304587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3304613:-1
position: 3304613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3304068-3304132:-1:exon

position:3304132:-1
position: 3304132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Aebp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Aebp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein AEBP2
translation: MAAALADMADLEELSRLSPLPPGSPGPAARGRAAPPDDDDDDEDADAAAAARAAAAALLRPGGGGGGGGSGGGGGAAGTMSEPSPGSGSRVGEDEEEDEDEEDDEEDEEEEEEDASSSSSGGGGEESSAESLEGSGGGDETRSLSPGAASSSGDGGRELGPGAAQGPGGGGGGGGGGSSSSSVVSSGGDDGYGTGGGGSSATSGGRRGSLEMSSDGEPLSRMDSEDSISSTIMDVDSTISSGRSTPAMMNGQGSATSSSKSIAYNCCWDQCQACFTSSPDLAEHIRTIHVDGQRGGVFVCLWKGCKVYNTPSTSQSWLQRHVLTHSGDRPFKCVVGGCSASFASQGGLARHVPTHFSQQNSSKVSSQPKAKEESPSKAGMNKRRKLKNKRRRSLPRPHDFFDAQTLDAIRHRAICFNLSAHIESLGKGHSVVFHSTVIAKRKEDSGKIKLLLHWMPEDILPDVWVNESERHQLKTKVVHLSKLPKDTALLLDPNIYRTMPQKRLKRALIRKVFNLYVSKP
SIO_010081: Aebp2
subclass of: SO_0000673
so part of: Aebp2
location: complement(join(3304087..3304132,3304587..3304613,3305725..3305838,3306424..3306491,3307276..3307400,3309507..3309693,3312230..3312337,3315225..3315432,3323516..3323678,3323781..3324297))
location: region:3304087-3324297:-1
so has part: feature:3323781-3324297:-1:exon
so has part: feature:3323516-3323678:-1:exon
so has part: feature:3315225-3315432:-1:exon
so has part: feature:3312230-3312337:-1:exon
so has part: feature:3309507-3309693:-1:exon
so has part: feature:3307276-3307400:-1:exon
so has part: feature:3306424-3306491:-1:exon
so has part: feature:3305725-3305838:-1:exon
so has part: feature:3304587-3304613:-1:exon
so has part: feature:3304087-3304132:-1:exon

XP_048191232.1
type: Protein
SIO_000068: ncbiprotein

position:3304087:-1
position: 3304087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3324297:-1
position: 3324297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3323781-3324297:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3323516-3323678:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3315225-3315432:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3312230-3312337:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3309507-3309693:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3307276-3307400:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3306424-3306491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3305725-3305838:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3304587-3304613:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3304087-3304132:-1:exon

Plekha5
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Plekha5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3333602..3435102)
location: region:3333602-3435102:-1
so has part: feature:3333602-3435102:-1:exon
subclass of: SO_0000010

125342930
type: Gene
SIO_000068: ncbigene

position:3333602:-1
position: 3333602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3435102:-1
position: 3435102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3333602-3435102:-1:exon

Plekha5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Plekha5
product: pleckstrin homology domain containing A5
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_048335274.1
SIO_010081: Plekha5
subclass of: SO_0000673
so part of: Plekha5
location: complement(join(3333602..3334364,3334895..3334996,3335873..3336012,3336964..3337088,3338142..3338282,3338958..3339167,3341319..3341437,3343185..3343305,3344951..3345139,3346269..3346315,3347504..3347615,3349435..3349536,3351460..3351609,3351735..3351815,3352223..3352279,3352996..3353031,3357785..3357865,3359744..3359797,3360655..3360774,3363632..3363715,3364041..3364479,3365597..3366052,3367573..3367590,3367825..3367935,3368705..3368810,3370076..3370149,3372443..3372547,3374749..3374869,3375383..3375466,3431843..3431900,3434741..3434820,3434931..3435102))
location: region:3333602-3435102:-1
so has part: feature:3434931-3435102:-1:exon
so has part: feature:3434741-3434820:-1:exon
so has part: feature:3431843-3431900:-1:exon
so has part: feature:3375383-3375466:-1:exon
so has part: feature:3374749-3374869:-1:exon
so has part: feature:3372443-3372547:-1:exon
so has part: feature:3370076-3370149:-1:exon
so has part: feature:3368705-3368810:-1:exon
so has part: feature:3367825-3367935:-1:exon
so has part: feature:3367573-3367590:-1:exon
so has part: feature:3365597-3366052:-1:exon
so has part: feature:3364041-3364479:-1:exon
so has part: feature:3363632-3363715:-1:exon
so has part: feature:3360655-3360774:-1:exon
so has part: feature:3359744-3359797:-1:exon
so has part: feature:3357785-3357865:-1:exon
so has part: feature:3352996-3353031:-1:exon
so has part: feature:3352223-3352279:-1:exon
so has part: feature:3351735-3351815:-1:exon
so has part: feature:3351460-3351609:-1:exon
so has part: feature:3349435-3349536:-1:exon
so has part: feature:3347504-3347615:-1:exon
so has part: feature:3346269-3346315:-1:exon
so has part: feature:3344951-3345139:-1:exon
so has part: feature:3343185-3343305:-1:exon
so has part: feature:3341319-3341437:-1:exon
so has part: feature:3338958-3339167:-1:exon
so has part: feature:3338142-3338282:-1:exon
so has part: feature:3336964-3337088:-1:exon
so has part: feature:3335873-3336012:-1:exon
so has part: feature:3334895-3334996:-1:exon
so has part: feature:3333602-3334364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3434931-3435102:-1:exon

position:3434931:-1
position: 3434931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3434741-3434820:-1:exon

position:3434741:-1
position: 3434741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3434820:-1
position: 3434820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3431843-3431900:-1:exon

position:3431843:-1
position: 3431843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3431900:-1
position: 3431900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3375383-3375466:-1:exon

position:3375383:-1
position: 3375383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3375466:-1
position: 3375466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3374749-3374869:-1:exon

position:3374749:-1
position: 3374749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3374869:-1
position: 3374869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3372443-3372547:-1:exon

position:3372443:-1
position: 3372443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3372547:-1
position: 3372547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3370076-3370149:-1:exon

position:3370076:-1
position: 3370076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3370149:-1
position: 3370149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3368705-3368810:-1:exon

position:3368705:-1
position: 3368705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3368810:-1
position: 3368810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3367825-3367935:-1:exon

position:3367825:-1
position: 3367825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3367935:-1
position: 3367935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3367573-3367590:-1:exon

position:3367573:-1
position: 3367573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3367590:-1
position: 3367590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3365597-3366052:-1:exon

position:3365597:-1
position: 3365597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3366052:-1
position: 3366052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3364041-3364479:-1:exon

position:3364041:-1
position: 3364041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3364479:-1
position: 3364479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3363632-3363715:-1:exon

position:3363632:-1
position: 3363632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3363715:-1
position: 3363715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3360655-3360774:-1:exon

position:3360655:-1
position: 3360655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3360774:-1
position: 3360774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3359744-3359797:-1:exon

position:3359744:-1
position: 3359744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3359797:-1
position: 3359797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3357785-3357865:-1:exon

position:3357785:-1
position: 3357785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3357865:-1
position: 3357865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3352996-3353031:-1:exon

position:3352996:-1
position: 3352996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3353031:-1
position: 3353031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3352223-3352279:-1:exon

position:3352223:-1
position: 3352223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3352279:-1
position: 3352279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3351735-3351815:-1:exon

position:3351735:-1
position: 3351735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3351815:-1
position: 3351815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3351460-3351609:-1:exon

position:3351460:-1
position: 3351460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3351609:-1
position: 3351609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3349435-3349536:-1:exon

position:3349435:-1
position: 3349435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3349536:-1
position: 3349536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3347504-3347615:-1:exon

position:3347504:-1
position: 3347504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3347615:-1
position: 3347615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3346269-3346315:-1:exon

position:3346269:-1
position: 3346269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3346315:-1
position: 3346315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3344951-3345139:-1:exon

position:3344951:-1
position: 3344951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3345139:-1
position: 3345139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3343185-3343305:-1:exon

position:3343185:-1
position: 3343185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3343305:-1
position: 3343305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3341319-3341437:-1:exon

position:3341319:-1
position: 3341319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3341437:-1
position: 3341437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3338958-3339167:-1:exon

position:3338958:-1
position: 3338958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3339167:-1
position: 3339167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3338142-3338282:-1:exon

position:3338142:-1
position: 3338142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3338282:-1
position: 3338282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3336964-3337088:-1:exon

position:3336964:-1
position: 3336964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3337088:-1
position: 3337088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3335873-3336012:-1:exon

position:3335873:-1
position: 3335873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3336012:-1
position: 3336012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3334895-3334996:-1:exon

position:3334895:-1
position: 3334895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3334996:-1
position: 3334996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3333602-3334364:-1:exon

position:3334364:-1
position: 3334364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Plekha5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Plekha5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: pleckstrin homology domain-containing family A member 5
translation: MAADLNLEWICSLPRSWTYGITRGGRVFFINEEAKSTTWLHPVTGEAVVTGHRRQSTDLPTGWEEAYTFEGARYYINHNERKVTCKHPVTGQPSQDNCIFVVNDQAVASMTSEDKKERPGSLLNEAANYSPASDYAAHPMSPAGRTSRASKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLSSEDHIHRKYAFKVSHPNMRTYYFCTDTGKEMELWMKAMLDAALVHTEPVKRITFNFRVDKMTPDSTPPKETNNIPNHRLLVKPEVQNNQRNKEAGKPDDKKALEAERYGFQKDGHERPLTKINSVKLAPGPALDYDGGGGVAYATQPAQPAHARPGNASTTDGRMANASVAGPGAPEASRVLQRTNSMLQLEQWIKIQKGRSHEEEPRGVISYQTLPRNMPSHRAPTLARYPEGYRTLPRNSKARPDSLCSTAPSCQERPEDKRRSLRGDTMWQLYEWQQRQFYSKQGTLPRPGPQALASMAEPPLPSMPASPSHGSLALYPAYSPQRAYRSELSPPSQRGDVTIDRRHRAHHPKQVYVPDRRSMPPGLTLPSVSPQSLQGKTPEELTLLLIQLRRQQAELSSVREHTLAQLMQLKLEAHSPKNEMLSHHLQRNTMYLDQQMKENEPIISMVHTMIENSALRPQLYHQFLRQKNKISLYCLSQDGGTLHRSRPEEADMDAKLSRLCEQDKVVRALEDRLRQLHKEKYTLEQALLSASQEIETNSDNPAAIQTVLLQRDDLQNGLLSTCRELSRATAELERAWREYDKLEYDVTITRKQMQEQLDRLGEVQTESAGIQRAQVQKEMWRIQDVMEGLSKHKQQRGSWEMGITGSKPFSTVKYKSEEEEVAPPRPPLPRSYDFTEHLPIAPPLSNDSSSLLCYSRGPVHLPEEKRMHQVQGQPRNGPHCGPDYRLYKSEPELTTVAEVDESNGEDKSEPVSEAEPTAVKGSHFPVGVVSPRTKSPTPESSTIASYVTLRKTKKMLDLRTERPRSAVEQLCLAESSRPRMTVEEQMERIRRHQQACLRERKKGWNVLGASDSSPVQSPSSLRENPFRVVQTRRRDEGLKEPDAVSMENDGKPKRGSPVEDIVPVGAAEPQSPDFSKESKRTEHAVYGMLFTPEPKEINSEESGDKERSEEPTPAGVTCSPGGERKITNHEALDSPEEDGSVADQIEPAASREPTPEASRESQALVVTSVSPSPEPSASPEPPLPTQLPEGSHFMCV
SIO_010081: Plekha5
subclass of: SO_0000673
so part of: Plekha5
location: complement(join(3334902..3334996,3335873..3336012,3336964..3337088,3338142..3338282,3338958..3339167,3341319..3341437,3343185..3343305,3344951..3345139,3346269..3346315,3347504..3347615,3349435..3349536,3351460..3351609,3351735..3351815,3352223..3352279,3352996..3353031,3357785..3357865,3359744..3359797,3360655..3360774,3363632..3363715,3364041..3364479,3365597..3366052,3367573..3367590,3367825..3367935,3368705..3368810,3370076..3370149,3372443..3372547,3374749..3374869,3375383..3375466,3431843..3431900,3434741..3434820,3434931..3435022))
location: region:3334902-3435022:-1
so has part: feature:3434931-3435022:-1:exon
so has part: feature:3434741-3434820:-1:exon
so has part: feature:3431843-3431900:-1:exon
so has part: feature:3375383-3375466:-1:exon
so has part: feature:3374749-3374869:-1:exon
so has part: feature:3372443-3372547:-1:exon
so has part: feature:3370076-3370149:-1:exon
so has part: feature:3368705-3368810:-1:exon
so has part: feature:3367825-3367935:-1:exon
so has part: feature:3367573-3367590:-1:exon
so has part: feature:3365597-3366052:-1:exon
so has part: feature:3364041-3364479:-1:exon
so has part: feature:3363632-3363715:-1:exon
so has part: feature:3360655-3360774:-1:exon
so has part: feature:3359744-3359797:-1:exon
so has part: feature:3357785-3357865:-1:exon
so has part: feature:3352996-3353031:-1:exon
so has part: feature:3352223-3352279:-1:exon
so has part: feature:3351735-3351815:-1:exon
so has part: feature:3351460-3351609:-1:exon
so has part: feature:3349435-3349536:-1:exon
so has part: feature:3347504-3347615:-1:exon
so has part: feature:3346269-3346315:-1:exon
so has part: feature:3344951-3345139:-1:exon
so has part: feature:3343185-3343305:-1:exon
so has part: feature:3341319-3341437:-1:exon
so has part: feature:3338958-3339167:-1:exon
so has part: feature:3338142-3338282:-1:exon
so has part: feature:3336964-3337088:-1:exon
so has part: feature:3335873-3336012:-1:exon
so has part: feature:3334902-3334996:-1:exon

XP_048191231.1
type: Protein
SIO_000068: ncbiprotein

position:3334902:-1
position: 3334902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3435022:-1
position: 3435022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3434931-3435022:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3434741-3434820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3431843-3431900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3375383-3375466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3374749-3374869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3372443-3372547:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3370076-3370149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3368705-3368810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3367825-3367935:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3367573-3367590:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3365597-3366052:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3364041-3364479:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3363632-3363715:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3360655-3360774:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3359744-3359797:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3357785-3357865:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3352996-3353031:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3352223-3352279:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3351735-3351815:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3351460-3351609:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3349435-3349536:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3347504-3347615:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3346269-3346315:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3344951-3345139:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3343185-3343305:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3341319-3341437:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3338958-3339167:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3338142-3338282:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3336964-3337088:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3335873-3336012:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3334902-3334996:-1:exon

Capza3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Capza3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3518588..3519484)
location: region:3518588-3519484:-1
so has part: feature:3518588-3519484:-1:exon
subclass of: SO_0000010

125342912
type: Gene
SIO_000068: ncbigene

position:3518588:-1
position: 3518588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3519484:-1
position: 3519484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3518588-3519484:-1:exon

Capza3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Capza3
product: capping actin protein of muscle Z-line subunit alpha 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_048335246.1
SIO_010081: Capza3
subclass of: SO_0000673
so part of: Capza3
location: complement(3518588..3519484)
location: region:3518588-3519484:-1
so has part: feature:3518588-3519484:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3518588-3519484:-1:exon

Capza3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Capza3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-actin-capping protein subunit alpha-3
translation: MALSILNRKQKEKVIHRLLIQAPPGEFVNAFDDLCLLIRDEKLMHHQGECAGHLHCQKYSVPLCIDGSPVLLSHHNVMGDRFFDYQSKLSFKYDLLQNQLRDIQSHGILRNEAEYLRNVVLCALKLYVNDHYPAGNCNVLRKTIHQKEFLIACIEDHNYNSGAFWNGLWKSKWIFQVNPFFTQITGRIFVQAHFFKSVNLHLQISKDLKESLEVVNQAQLALSFARLVEEQENLFQMAVLEELQELSSHALRGILRRDLPVTRTLIDWQRILADLNLVMYPKLGYVIYSRSVLCNWII
SIO_010081: Capza3
subclass of: SO_0000673
so part of: Capza3
location: complement(3518588..3519484)
location: region:3518588-3519484:-1
so has part: feature:3518588-3519484:-1:exon

XP_048191203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3518588-3519484:-1:exon

Plcz1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Plcz1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3525159..3545001
location: region:3525159-3545001:1
so has part: feature:3525159-3545001:1:exon
subclass of: SO_0000010

125342732
type: Gene
SIO_000068: ncbigene

position:3525159:1
position: 3525159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3545001:1
position: 3545001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3525159-3545001:1:exon

Plcz1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Plcz1
product: phospholipase C zeta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 6% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335045.1
SIO_010081: Plcz1
subclass of: SO_0000673
so part of: Plcz1
location: join(3525159..3525228,3528344..3528545,3529778..3529922,3531121..3531270,3532936..3533181,3533748..3533904,3536404..3536520,3538313..3538482,3541770..3541899,3543397..3543546,3544901..3545001)
location: region:3525159-3545001:1
so has part: feature:3525159-3525228:1:exon
so has part: feature:3528344-3528545:1:exon
so has part: feature:3529778-3529922:1:exon
so has part: feature:3531121-3531270:1:exon
so has part: feature:3532936-3533181:1:exon
so has part: feature:3533748-3533904:1:exon
so has part: feature:3536404-3536520:1:exon
so has part: feature:3538313-3538482:1:exon
so has part: feature:3541770-3541899:1:exon
so has part: feature:3543397-3543546:1:exon
so has part: feature:3544901-3545001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3525159-3525228:1:exon

position:3525228:1
position: 3525228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3528344-3528545:1:exon

position:3528344:1
position: 3528344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3528545:1
position: 3528545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3529778-3529922:1:exon

position:3529778:1
position: 3529778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3529922:1
position: 3529922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3531121-3531270:1:exon

position:3531121:1
position: 3531121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3531270:1
position: 3531270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3532936-3533181:1:exon

position:3532936:1
position: 3532936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3533181:1
position: 3533181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3533748-3533904:1:exon

position:3533748:1
position: 3533748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3533904:1
position: 3533904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3536404-3536520:1:exon

position:3536404:1
position: 3536404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3536520:1
position: 3536520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3538313-3538482:1:exon

position:3538313:1
position: 3538313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3538482:1
position: 3538482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3541770-3541899:1:exon

position:3541770:1
position: 3541770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3541899:1
position: 3541899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3543397-3543546:1:exon

position:3543397:1
position: 3543397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3543546:1
position: 3543546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3544901-3545001:1:exon

position:3544901:1
position: 3544901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Plcz1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Plcz1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1
translation: MNQTQSSQLIQRYEPIEEVKRGQQMSFEGFIRYMCSPECLLFKKECKKVYQDMTQPLNDYFISSSHNTYLISDQLVGPSDLWGYVSALVKGCRCLEIDCWDGSQNEPIVYHGYTLTSKLLFKTVIQAINKYAFVASDYPVVLSLENHCSPSQQEIMAETLQSIFGEALLSDMLDEFPDSLPSPEALKFKILIKNKRIGTLLETRERKGSDKRGKVEEYEEEVGDQEEEEEEGKQPETQDSFLSRVTQEKESEFLKVLTGNLFKKRKTRKVKIALALSDLVIYTKAERFRNFQYSRMYQQFNECNSLGESQARRLSKLKVQEFILHTKKFLTRIYPKAIRADSSNFNPQEFWNTGCQMVALNFQTPGLPMDLQNGKFLDNGGSGYVLKPLFLRDHKSHLNPMTMTDSEPVTLSIRIISGIQLPFGSSPTNRADTLVIVEVYGVPNDQIKQQTRIIRKNAFSPKWNETFTFIIQVPELALIRFVVENPGLIAGSEFLGQYTLPVLCMNKGYRRIPLFSRTGESLEPSSLFVYVWYIREEKST
SIO_010081: Plcz1
subclass of: SO_0000673
so part of: Plcz1
location: join(3525174..3525228,3528344..3528545,3529778..3529922,3531121..3531270,3532936..3533181,3533748..3533904,3536404..3536520,3538313..3538482,3541770..3541899,3543397..3543546,3544901..3545001)
location: region:3525174-3545001:1
so has part: feature:3525174-3525228:1:exon
so has part: feature:3528344-3528545:1:exon
so has part: feature:3529778-3529922:1:exon
so has part: feature:3531121-3531270:1:exon
so has part: feature:3532936-3533181:1:exon
so has part: feature:3533748-3533904:1:exon
so has part: feature:3536404-3536520:1:exon
so has part: feature:3538313-3538482:1:exon
so has part: feature:3541770-3541899:1:exon
so has part: feature:3543397-3543546:1:exon
so has part: feature:3544901-3545001:1:exon

XP_048191002.1
type: Protein
SIO_000068: ncbiprotein

position:3525174:1
position: 3525174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3525174-3525228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3528344-3528545:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3529778-3529922:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3531121-3531270:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3532936-3533181:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3533748-3533904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3536404-3536520:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3538313-3538482:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3541770-3541899:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3543397-3543546:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3544901-3545001:1:exon

Pik3c2g
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Pik3c2g
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3545880..3664584)
location: region:3545880-3664584:-1
so has part: feature:3545880-3664584:-1:exon
subclass of: SO_0000010

125342733
type: Gene
SIO_000068: ncbigene

position:3545880:-1
position: 3545880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3664584:-1
position: 3664584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3545880-3664584:-1:exon

Pik3c2g
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pik3c2g
product: phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335046.1
SIO_010081: Pik3c2g
subclass of: SO_0000673
so part of: Pik3c2g
location: complement(join(3545880..3546032,3547390..3547516,3558089..3558183,3558448..3558523,3561533..3561641,3565077..3565198,3566345..3566537,3569995..3570104,3574452..3574608,3578145..3578317,3578550..3578686,3581069..3581198,3582511..3582603,3585005..3585112,3586503..3586683,3606107..3606201,3606622..3606715,3620580..3620768,3626672..3626802,3628611..3628725,3634330..3634461,3635253..3635375,3637731..3637926,3641473..3641506,3642931..3643053,3644924..3644983,3647407..3647470,3649212..3649282,3652582..3652684,3656975..3657089,3658094..3658251,3661694..3661776,3663916..3664139,3664359..3664584))
location: region:3545880-3664584:-1
so has part: feature:3664359-3664584:-1:exon
so has part: feature:3663916-3664139:-1:exon
so has part: feature:3661694-3661776:-1:exon
so has part: feature:3658094-3658251:-1:exon
so has part: feature:3656975-3657089:-1:exon
so has part: feature:3652582-3652684:-1:exon
so has part: feature:3649212-3649282:-1:exon
so has part: feature:3647407-3647470:-1:exon
so has part: feature:3644924-3644983:-1:exon
so has part: feature:3642931-3643053:-1:exon
so has part: feature:3641473-3641506:-1:exon
so has part: feature:3637731-3637926:-1:exon
so has part: feature:3635253-3635375:-1:exon
so has part: feature:3634330-3634461:-1:exon
so has part: feature:3628611-3628725:-1:exon
so has part: feature:3626672-3626802:-1:exon
so has part: feature:3620580-3620768:-1:exon
so has part: feature:3606622-3606715:-1:exon
so has part: feature:3606107-3606201:-1:exon
so has part: feature:3586503-3586683:-1:exon
so has part: feature:3585005-3585112:-1:exon
so has part: feature:3582511-3582603:-1:exon
so has part: feature:3581069-3581198:-1:exon
so has part: feature:3578550-3578686:-1:exon
so has part: feature:3578145-3578317:-1:exon
so has part: feature:3574452-3574608:-1:exon
so has part: feature:3569995-3570104:-1:exon
so has part: feature:3566345-3566537:-1:exon
so has part: feature:3565077-3565198:-1:exon
so has part: feature:3561533-3561641:-1:exon
so has part: feature:3558448-3558523:-1:exon
so has part: feature:3558089-3558183:-1:exon
so has part: feature:3547390-3547516:-1:exon
so has part: feature:3545880-3546032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3664359-3664584:-1:exon

position:3664359:-1
position: 3664359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3663916-3664139:-1:exon

position:3663916:-1
position: 3663916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3664139:-1
position: 3664139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3661694-3661776:-1:exon

position:3661694:-1
position: 3661694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3661776:-1
position: 3661776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3658094-3658251:-1:exon

position:3658094:-1
position: 3658094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3658251:-1
position: 3658251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3656975-3657089:-1:exon

position:3656975:-1
position: 3656975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3657089:-1
position: 3657089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3652582-3652684:-1:exon

position:3652582:-1
position: 3652582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3652684:-1
position: 3652684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3649212-3649282:-1:exon

position:3649212:-1
position: 3649212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3649282:-1
position: 3649282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3647407-3647470:-1:exon

position:3647407:-1
position: 3647407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3647470:-1
position: 3647470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3644924-3644983:-1:exon

position:3644924:-1
position: 3644924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3644983:-1
position: 3644983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3642931-3643053:-1:exon

position:3642931:-1
position: 3642931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3643053:-1
position: 3643053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3641473-3641506:-1:exon

position:3641473:-1
position: 3641473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3641506:-1
position: 3641506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3637731-3637926:-1:exon

position:3637731:-1
position: 3637731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3637926:-1
position: 3637926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3635253-3635375:-1:exon

position:3635253:-1
position: 3635253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3635375:-1
position: 3635375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3634330-3634461:-1:exon

position:3634330:-1
position: 3634330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3634461:-1
position: 3634461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3628611-3628725:-1:exon

position:3628611:-1
position: 3628611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3628725:-1
position: 3628725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3626672-3626802:-1:exon

position:3626672:-1
position: 3626672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3626802:-1
position: 3626802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3620580-3620768:-1:exon

position:3620580:-1
position: 3620580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3620768:-1
position: 3620768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3606622-3606715:-1:exon

position:3606622:-1
position: 3606622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3606715:-1
position: 3606715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3606107-3606201:-1:exon

position:3606107:-1
position: 3606107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3606201:-1
position: 3606201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3586503-3586683:-1:exon

position:3586503:-1
position: 3586503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3586683:-1
position: 3586683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3585005-3585112:-1:exon

position:3585005:-1
position: 3585005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3585112:-1
position: 3585112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3582511-3582603:-1:exon

position:3582511:-1
position: 3582511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3582603:-1
position: 3582603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3581069-3581198:-1:exon

position:3581069:-1
position: 3581069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3581198:-1
position: 3581198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3578550-3578686:-1:exon

position:3578550:-1
position: 3578550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3578686:-1
position: 3578686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3578145-3578317:-1:exon

position:3578145:-1
position: 3578145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3578317:-1
position: 3578317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3574452-3574608:-1:exon

position:3574452:-1
position: 3574452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3574608:-1
position: 3574608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3569995-3570104:-1:exon

position:3569995:-1
position: 3569995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3570104:-1
position: 3570104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3566345-3566537:-1:exon

position:3566345:-1
position: 3566345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3566537:-1
position: 3566537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3565077-3565198:-1:exon

position:3565077:-1
position: 3565077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3565198:-1
position: 3565198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3561533-3561641:-1:exon

position:3561533:-1
position: 3561533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3561641:-1
position: 3561641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3558448-3558523:-1:exon

position:3558448:-1
position: 3558448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3558523:-1
position: 3558523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3558089-3558183:-1:exon

position:3558089:-1
position: 3558089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3558183:-1
position: 3558183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3547390-3547516:-1:exon

position:3547390:-1
position: 3547390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3547516:-1
position: 3547516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:3545880-3546032:-1:exon

position:3546032:-1
position: 3546032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pik3c2g
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pik3c2g
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: phosphatidylinositol 3-kinase C2 domain-containing subunit gamma
translation: MAHHWHTDGDAKGLEQSAQVYSYCPSAHTPQVPRKVSLGFDHLTAESHSTIPLSQRQSEEHPCFVPQATQGHLLHDRRNPREWEEARPGYHIGFEGSLPLEDPSFPADFLPRQEVERCGRGDMLEPWRMFSKDGSFPPKVGGNSWMEDKEPSDGAIQIVEAHGGSHGDLTSFCDHVEKIRETYQAEDIHSNSGKFWSVTTAFPSQLCANTRFSVDIYSDNMAQALHFIPSANYLVKDLIADILHLFPNDRLFPKDHLLQLCGLEEFLQSDHCLGSHKIFQKDKSVIQLHLQKNKETPGKFSRKPKDDSSRFHASQLLECAPGWKESRQGLLMALRSYGVQVEHLLQIQEEAEDKGSPAIFPSAGNPFQQCVKNVMEEVKNICSLLGCVETKQITDAVNELRLMLQRKAEDVQPNSETSGKDIIKEITMELTRAIHQLMGVYCNSFHAGFRLLHAPGSSSRIHPGLLSHLSFTVCGICNIPEPWARSYDAFSFSCWLTYAGKKLCQVQNYRTIPAKKWFFFLVNWNEMITFPLEIKSLPRESMLTVKLFGTSWEHANRHVLAWSSFPLFPEGNPMGGPRLFSMTLQKEPPIETIAPGVWDTSQPSPLTLQVDFPDGGWRYTKPDLEESSVNLEEPPQECLKHIARLSRKLSPSLLSEEKRRYLWFYRFHCSHENCSLPLVLGSAPGWDERTVTEMRVIARRWTFLHPLEALGLLTSSFPDQEIRKVAVHQLDRLPNDELQEYLPQLVQAVKFEWSLESPLVNLLLHRSLQSIQMAHQLYWLLKDALNESYFQGWYQKLLAAFQFCVGEALNNEFSKERKLVHILGDIAEKVKSASDSQRQEVLEEELGRLEEFFQDIKTCHLPVSPALCVKGIDRNACSYFTSHALPLKISVINANPMGKNTSIIFKTGDDLRQDMLVLQLVEAMDKMWLQEGLDLQMVTYRCLSTGKSQGLVQMVPQAVTLAHVHRQAGLLGPLKENSIQKWFRQHHGSGEDYEKALRNFLFSCAGWCVVTFVLGVCDRHNDNIMLTTAGHMFHIDFGKFLGHAQMFGGSKGQDRAPFIFTSEMEYFITEGGKNPQQFQDFVELCCRAYNIVRRHSRLLLNLLEMMLHAGLPELRGIQDLKYVYKNLRPQDTDLEATSHFTRKIKESVECFPVKLNNFIHILAQMAAISPTKSASHRTPQESCVSRTTRIIQRATILGFSKTHPHHLYLIQVVRADQEISLTEKSFDQLSILHGQLQKQFPSLTLPEFPHWWHLPFTSSDHKRLRDLNRYLEGVTGGPGEVANSDCVLSFFLSEPVQQKIEDSALGDLSQKPLDNSPKVQLLISHEGTKLTILVKHMKNIHLPDGSAPSAHAEFYLLPHPNNDQRRKTKSVPKCANPTYNEIVVYDGVTELEGRVLMLIVKSKTVFVGAINIYLCSVPLNEEKWYPLGNSII
SIO_010081: Pik3c2g
subclass of: SO_0000673
so part of: Pik3c2g
location: complement(join(3545880..3546032,3547390..3547516,3558089..3558183,3558448..3558523,3561533..3561641,3565077..3565198,3566345..3566537,3569995..3570104,3574452..3574608,3578145..3578317,3578550..3578686,3581069..3581198,3582511..3582603,3585005..3585112,3586503..3586683,3606107..3606201,3606622..3606715,3620580..3620768,3626672..3626802,3628611..3628725,3634330..3634461,3635253..3635375,3637731..3637926,3641473..3641506,3642931..3643053,3644924..3644983,3647407..3647470,3649212..3649282,3652582..3652684,3656975..3657089,3658094..3658251,3661694..3661776,3663916..3664139,3664359..3664584))
location: region:3545880-3664584:-1
so has part: feature:3664359-3664584:-1:exon
so has part: feature:3663916-3664139:-1:exon
so has part: feature:3661694-3661776:-1:exon
so has part: feature:3658094-3658251:-1:exon
so has part: feature:3656975-3657089:-1:exon
so has part: feature:3652582-3652684:-1:exon
so has part: feature:3649212-3649282:-1:exon
so has part: feature:3647407-3647470:-1:exon
so has part: feature:3644924-3644983:-1:exon
so has part: feature:3642931-3643053:-1:exon
so has part: feature:3641473-3641506:-1:exon
so has part: feature:3637731-3637926:-1:exon
so has part: feature:3635253-3635375:-1:exon
so has part: feature:3634330-3634461:-1:exon
so has part: feature:3628611-3628725:-1:exon
so has part: feature:3626672-3626802:-1:exon
so has part: feature:3620580-3620768:-1:exon
so has part: feature:3606622-3606715:-1:exon
so has part: feature:3606107-3606201:-1:exon
so has part: feature:3586503-3586683:-1:exon
so has part: feature:3585005-3585112:-1:exon
so has part: feature:3582511-3582603:-1:exon
so has part: feature:3581069-3581198:-1:exon
so has part: feature:3578550-3578686:-1:exon
so has part: feature:3578145-3578317:-1:exon
so has part: feature:3574452-3574608:-1:exon
so has part: feature:3569995-3570104:-1:exon
so has part: feature:3566345-3566537:-1:exon
so has part: feature:3565077-3565198:-1:exon
so has part: feature:3561533-3561641:-1:exon
so has part: feature:3558448-3558523:-1:exon
so has part: feature:3558089-3558183:-1:exon
so has part: feature:3547390-3547516:-1:exon
so has part: feature:3545880-3546032:-1:exon

XP_048191003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3664359-3664584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3663916-3664139:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3661694-3661776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3658094-3658251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3656975-3657089:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3652582-3652684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3649212-3649282:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3647407-3647470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3644924-3644983:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3642931-3643053:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3641473-3641506:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3637731-3637926:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3635253-3635375:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3634330-3634461:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3628611-3628725:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3626672-3626802:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3620580-3620768:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3606622-3606715:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3606107-3606201:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3586503-3586683:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3585005-3585112:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3582511-3582603:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3581069-3581198:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3578550-3578686:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3578145-3578317:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3574452-3574608:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3569995-3570104:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3566345-3566537:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3565077-3565198:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3561533-3561641:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3558448-3558523:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3558089-3558183:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3547390-3547516:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3545880-3546032:-1:exon

Rergl
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Rergl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3699676..3707124
location: region:3699676-3707124:1
so has part: feature:3699676-3707124:1:exon
subclass of: SO_0000010

125342907
type: Gene
SIO_000068: ncbigene

position:3699676:1
position: 3699676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3707124:1
position: 3707124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3699676-3707124:1:exon

Rergl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rergl
product: RERG like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048335241.1
SIO_010081: Rergl
subclass of: SO_0000673
so part of: Rergl
location: join(3699676..3699780,3700787..3700843,3703624..3703697,3705226..3705374,3706712..3707124)
location: region:3699676-3707124:1
so has part: feature:3699676-3699780:1:exon
so has part: feature:3700787-3700843:1:exon
so has part: feature:3703624-3703697:1:exon
so has part: feature:3705226-3705374:1:exon
so has part: feature:3706712-3707124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3699676-3699780:1:exon

position:3699780:1
position: 3699780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3700787-3700843:1:exon

position:3700787:1
position: 3700787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3700843:1
position: 3700843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3703624-3703697:1:exon

position:3703624:1
position: 3703624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3703697:1
position: 3703697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3705226-3705374:1:exon

position:3705226:1
position: 3705226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3705374:1
position: 3705374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3706712-3707124:1:exon

position:3706712:1
position: 3706712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rergl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rergl
product: RERG like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048335242.1
SIO_010081: Rergl
subclass of: SO_0000673
so part of: Rergl
location: join(3699689..3699780,3703624..3703697,3705226..3705374,3706712..3707124)
location: region:3699689-3707124:1
so has part: feature:3699689-3699780:1:exon
so has part: feature:3703624-3703697:1:exon
so has part: feature:3705226-3705374:1:exon
so has part: feature:3706712-3707124:1:exon

position:3699689:1
position: 3699689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3699689-3699780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3703624-3703697:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3705226-3705374:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3706712-3707124:1:exon

Rergl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rergl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related and estrogen-regulated growth inhibitor-like protein isoform X1
translation: MNEVKLAVLGRKGTGKSALTVRFLTKRFIGEYASNFESIYRKHLCLEGKQLNLEIYDPCSQPHKATFALTHELHWADGFVVVYDISDRSSFAFAKALVCSLREPANTHCKRAMEAVVFLVGNKQDLCHIREVGWDEGQRLACEYRCQFCELSAAEQSLEIEMVFLRAIKDILANFKLKEKRRPSGSRSMAKLIHNVFGKRRKSV
SIO_010081: Rergl
subclass of: SO_0000673
so part of: Rergl
location: join(3699729..3699780,3700787..3700843,3703624..3703697,3705226..3705374,3706712..3706994)
location: region:3699729-3706994:1
so has part: feature:3699729-3699780:1:exon
so has part: feature:3700787-3700843:1:exon
so has part: feature:3703624-3703697:1:exon
so has part: feature:3705226-3705374:1:exon
so has part: feature:3706712-3706994:1:exon

XP_048191198.1
type: Protein
SIO_000068: ncbiprotein

position:3699729:1
position: 3699729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3706994:1
position: 3706994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3699729-3699780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700787-3700843:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3703624-3703697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3705226-3705374:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3706712-3706994:1:exon

Rergl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rergl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related and estrogen-regulated growth inhibitor-like protein isoform X2
translation: MNEVKLAVLGRKGTGKSESIYRKHLCLEGKQLNLEIYDPCSQPHKATFALTHELHWADGFVVVYDISDRSSFAFAKALVCSLREPANTHCKRAMEAVVFLVGNKQDLCHIREVGWDEGQRLACEYRCQFCELSAAEQSLEIEMVFLRAIKDILANFKLKEKRRPSGSRSMAKLIHNVFGKRRKSV
SIO_010081: Rergl
subclass of: SO_0000673
so part of: Rergl
location: join(3699729..3699780,3703624..3703697,3705226..3705374,3706712..3706994)
location: region:3699729-3706994:1
so has part: feature:3699729-3699780:1:exon
so has part: feature:3703624-3703697:1:exon
so has part: feature:3705226-3705374:1:exon
so has part: feature:3706712-3706994:1:exon

XP_048191199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3699729-3699780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3703624-3703697:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3705226-3705374:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3706712-3706994:1:exon

Mgst1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Mgst1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4133951..4141098)
location: region:4133951-4141098:-1
so has part: feature:4133951-4141098:-1:exon
subclass of: SO_0000010

125342900
type: Gene
SIO_000068: ncbigene

position:4133951:-1
position: 4133951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4141098:-1
position: 4141098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4133951-4141098:-1:exon

Mgst1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Mgst1
product: microsomal glutathione S-transferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048335226.1
SIO_010081: Mgst1
subclass of: SO_0000673
so part of: Mgst1
location: complement(join(4133951..4134231,4135953..4136047,4137650..4137807,4141054..4141098))
location: region:4133951-4141098:-1
so has part: feature:4141054-4141098:-1:exon
so has part: feature:4137650-4137807:-1:exon
so has part: feature:4135953-4136047:-1:exon
so has part: feature:4133951-4134231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4141054-4141098:-1:exon

position:4141054:-1
position: 4141054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4137650-4137807:-1:exon

position:4137650:-1
position: 4137650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4137807:-1
position: 4137807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4135953-4136047:-1:exon

position:4135953:-1
position: 4135953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4136047:-1
position: 4136047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4133951-4134231:-1:exon

position:4134231:-1
position: 4134231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mgst1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Mgst1
product: microsomal glutathione S-transferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048335225.1
SIO_010081: Mgst1
subclass of: SO_0000673
so part of: Mgst1
location: complement(join(4133951..4134231,4135953..4136047,4137650..4137807,4140992..4140994,4141054..4141073))
location: region:4133951-4141073:-1
so has part: feature:4141054-4141073:-1:exon
so has part: feature:4140992-4140994:-1:exon
so has part: feature:4137650-4137807:-1:exon
so has part: feature:4135953-4136047:-1:exon
so has part: feature:4133951-4134231:-1:exon

position:4141073:-1
position: 4141073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4141054-4141073:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4140992-4140994:-1:exon

position:4140992:-1
position: 4140992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4140994:-1
position: 4140994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4137650-4137807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4135953-4136047:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4133951-4134231:-1:exon

Mgst1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Mgst1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microsomal glutathione S-transferase 1
translation: MANLDQLMDNEVFQAFASYTTIILSKMMLMSTVTAFHRLTKKVFVNPEDCASFAKGENAKKYLRTDDSVERVRRAHLNDLENLVPFVGIGLLYTLSGPDLSTALLHFRLFVGARLFHTVAYLTPLPQPSRALGFFLGYGVTFSMAYRVLRAGLRL
SIO_010081: Mgst1
subclass of: SO_0000673
so part of: Mgst1
location: complement(join(4133985..4134231,4135953..4136047,4137650..4137775))
location: region:4133985-4137775:-1
so has part: feature:4137650-4137775:-1:exon
so has part: feature:4135953-4136047:-1:exon
so has part: feature:4133985-4134231:-1:exon

XP_048191182.1
type: Protein
SIO_000068: ncbiprotein

position:4133985:-1
position: 4133985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4137775:-1
position: 4137775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4137650-4137775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4135953-4136047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4133985-4134231:-1:exon

Mgst1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Mgst1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microsomal glutathione S-transferase 1
translation: MANLDQLMDNEVFQAFASYTTIILSKMMLMSTVTAFHRLTKKVFVNPEDCASFAKGENAKKYLRTDDSVERVRRAHLNDLENLVPFVGIGLLYTLSGPDLSTALLHFRLFVGARLFHTVAYLTPLPQPSRALGFFLGYGVTFSMAYRVLRAGLRL
SIO_010081: Mgst1
subclass of: SO_0000673
so part of: Mgst1
location: complement(join(4133985..4134231,4135953..4136047,4137650..4137775))
location: region:4133985-4137775:-1
so has part: feature:4137650-4137775:-1:exon
so has part: feature:4135953-4136047:-1:exon
so has part: feature:4133985-4134231:-1:exon

XP_048191183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4137650-4137775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4135953-4136047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4133985-4134231:-1:exon

Eps8
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Eps8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4218297..4236011)
location: region:4218297-4236011:-1
so has part: feature:4218297-4236011:-1:exon
subclass of: SO_0000010

125342734
type: Gene
SIO_000068: ncbigene

position:4218297:-1
position: 4218297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4236011:-1
position: 4236011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4218297-4236011:-1:exon

Eps8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Eps8
product: epidermal growth factor receptor pathway substrate 8
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335047.1
SIO_010081: Eps8
subclass of: SO_0000673
so part of: Eps8
location: complement(join(4218297..4218335,4218882..4219013,4220002..4220112,4220564..4220630,4221243..4221378,4222450..4222624,4224614..4224762,4227303..4227377,4227980..4228068,4228625..4228751,4229990..4230060,4230664..4230800,4231100..4231182,4231535..4231684,4231811..4231972,4232496..4232563,4234149..4234199,4234755..4234831,4235930..4236011))
location: region:4218297-4236011:-1
so has part: feature:4235930-4236011:-1:exon
so has part: feature:4234755-4234831:-1:exon
so has part: feature:4234149-4234199:-1:exon
so has part: feature:4232496-4232563:-1:exon
so has part: feature:4231811-4231972:-1:exon
so has part: feature:4231535-4231684:-1:exon
so has part: feature:4231100-4231182:-1:exon
so has part: feature:4230664-4230800:-1:exon
so has part: feature:4229990-4230060:-1:exon
so has part: feature:4228625-4228751:-1:exon
so has part: feature:4227980-4228068:-1:exon
so has part: feature:4227303-4227377:-1:exon
so has part: feature:4224614-4224762:-1:exon
so has part: feature:4222450-4222624:-1:exon
so has part: feature:4221243-4221378:-1:exon
so has part: feature:4220564-4220630:-1:exon
so has part: feature:4220002-4220112:-1:exon
so has part: feature:4218882-4219013:-1:exon
so has part: feature:4218297-4218335:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4235930-4236011:-1:exon

position:4235930:-1
position: 4235930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4234755-4234831:-1:exon

position:4234755:-1
position: 4234755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4234831:-1
position: 4234831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4234149-4234199:-1:exon

position:4234149:-1
position: 4234149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4234199:-1
position: 4234199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4232496-4232563:-1:exon

position:4232496:-1
position: 4232496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4232563:-1
position: 4232563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4231811-4231972:-1:exon

position:4231811:-1
position: 4231811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4231972:-1
position: 4231972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4231535-4231684:-1:exon

position:4231535:-1
position: 4231535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4231684:-1
position: 4231684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4231100-4231182:-1:exon

position:4231100:-1
position: 4231100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4231182:-1
position: 4231182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4230664-4230800:-1:exon

position:4230664:-1
position: 4230664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4230800:-1
position: 4230800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4229990-4230060:-1:exon

position:4229990:-1
position: 4229990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4230060:-1
position: 4230060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4228625-4228751:-1:exon

position:4228625:-1
position: 4228625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4228751:-1
position: 4228751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4227980-4228068:-1:exon

position:4227980:-1
position: 4227980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4228068:-1
position: 4228068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4227303-4227377:-1:exon

position:4227303:-1
position: 4227303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4227377:-1
position: 4227377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4224614-4224762:-1:exon

position:4224614:-1
position: 4224614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4224762:-1
position: 4224762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4222450-4222624:-1:exon

position:4222450:-1
position: 4222450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4222624:-1
position: 4222624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4221243-4221378:-1:exon

position:4221243:-1
position: 4221243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4221378:-1
position: 4221378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4220564-4220630:-1:exon

position:4220564:-1
position: 4220564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4220630:-1
position: 4220630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4220002-4220112:-1:exon

position:4220002:-1
position: 4220002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4220112:-1
position: 4220112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4218882-4219013:-1:exon

position:4218882:-1
position: 4218882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4219013:-1
position: 4219013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4218297-4218335:-1:exon

position:4218335:-1
position: 4218335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Eps8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Eps8
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: epidermal growth factor receptor kinase substrate 8
translation: MNAHLPSQPGSLTMYASQMNGYRTSPAFPHMDRDHGSKSSAKALYGPDGSYFFRSSSKQKKKEQRKNYARDSASSIPDVSQYRVEHLTTFVLDRKDAMINVEDGIRKLKLLDAKGKVWTQDMILQVDDRAVSLIDLESKNELENFPFSTIHQCQAVINACSYDSILALVCKESTQNKPDLHLFQCDEVKANLVSEDIESAMSDSKGGKQKRRPEALRMISKAEPGIPPPPRAPAPVPPGTVTQVDVRSRVAAWSAWAADQGEAERRPHPEQEETPEMAAARIDRDVQILNHILDDIEFFITKLQKAAEAFSELAKRKKSKKSKRKGPGEGVLTLRAKPPPPDEFVDCFQKFKHGFNLLAKLKLHIQNPSAADLVHFLFTPLHMVVQASGGPELARSILSPLLTKETLDFLSHTVTSEERELWLSLGDTWLKARAEWPRDQFIPPLRPAFRHGWEPPVLGFPAAEQQERPPPTEGLETPRPARPPETAVLGAFQRLRVPSRPTRTPSTAACTPGGPHPDQGDTAAGFHPTPNRHAESHLPVIVVLRLLTHYGGPRKGFSKLTSRTPAQPRKYARSKFDFTARNSSELSVQRDDVLEVLDDRKQWWKVRSASGDAGFVPNNILDVMAAPAPGGPPYTHTIQLLMPKKSSSCSR
SIO_010081: Eps8
subclass of: SO_0000673
so part of: Eps8
location: complement(join(4218297..4218335,4218882..4219013,4220002..4220112,4220564..4220630,4221243..4221378,4222450..4222624,4224614..4224762,4227303..4227377,4227980..4228068,4228625..4228751,4229990..4230060,4230664..4230800,4231100..4231182,4231535..4231684,4231811..4231972,4232496..4232563,4234149..4234199,4234755..4234831,4235930..4235988))
location: region:4218297-4235988:-1
so has part: feature:4235930-4235988:-1:exon
so has part: feature:4234755-4234831:-1:exon
so has part: feature:4234149-4234199:-1:exon
so has part: feature:4232496-4232563:-1:exon
so has part: feature:4231811-4231972:-1:exon
so has part: feature:4231535-4231684:-1:exon
so has part: feature:4231100-4231182:-1:exon
so has part: feature:4230664-4230800:-1:exon
so has part: feature:4229990-4230060:-1:exon
so has part: feature:4228625-4228751:-1:exon
so has part: feature:4227980-4228068:-1:exon
so has part: feature:4227303-4227377:-1:exon
so has part: feature:4224614-4224762:-1:exon
so has part: feature:4222450-4222624:-1:exon
so has part: feature:4221243-4221378:-1:exon
so has part: feature:4220564-4220630:-1:exon
so has part: feature:4220002-4220112:-1:exon
so has part: feature:4218882-4219013:-1:exon
so has part: feature:4218297-4218335:-1:exon

XP_048191004.1
type: Protein
SIO_000068: ncbiprotein

position:4235988:-1
position: 4235988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4235930-4235988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4234755-4234831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4234149-4234199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4232496-4232563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4231811-4231972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4231535-4231684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4231100-4231182:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4230664-4230800:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4229990-4230060:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4228625-4228751:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4227980-4228068:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4227303-4227377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4224614-4224762:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4222450-4222624:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4221243-4221378:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4220564-4220630:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4220002-4220112:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4218882-4219013:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4218297-4218335:-1:exon

LOC125342858
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4264103..4275109
location: region:4264103-4275109:1
so has part: feature:4264103-4275109:1:exon
subclass of: SO_0000010

125342858
type: Gene
SIO_000068: ncbigene

position:4264103:1
position: 4264103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4275109:1
position: 4275109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4264103-4275109:1:exon

LOC125342858
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342858
product: serine/threonine kinase receptor associated protein
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons
transcript id: XM_048335173.1
SIO_010081: LOC125342858
subclass of: SO_0000673
so part of: LOC125342858
location: join(4264103..4264487,4265428..4265564,4269069..4269150,4269400..4269472,4270493..4270589,4271045..4271183,4272241..4272378,4273372..4273521,4274030..4274095,4274587..4275109)
location: region:4264103-4275109:1
so has part: feature:4264103-4264487:1:exon
so has part: feature:4265428-4265564:1:exon
so has part: feature:4269069-4269150:1:exon
so has part: feature:4269400-4269472:1:exon
so has part: feature:4270493-4270589:1:exon
so has part: feature:4271045-4271183:1:exon
so has part: feature:4272241-4272378:1:exon
so has part: feature:4273372-4273521:1:exon
so has part: feature:4274030-4274095:1:exon
so has part: feature:4274587-4275109:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4264103-4264487:1:exon

position:4264487:1
position: 4264487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4265428-4265564:1:exon

position:4265428:1
position: 4265428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4265564:1
position: 4265564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4269069-4269150:1:exon

position:4269069:1
position: 4269069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4269150:1
position: 4269150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4269400-4269472:1:exon

position:4269400:1
position: 4269400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4269472:1
position: 4269472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4270493-4270589:1:exon

position:4270493:1
position: 4270493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4270589:1
position: 4270589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4271045-4271183:1:exon

position:4271045:1
position: 4271045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4271183:1
position: 4271183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4272241-4272378:1:exon

position:4272241:1
position: 4272241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4272378:1
position: 4272378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4273372-4273521:1:exon

position:4273372:1
position: 4273372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4273521:1
position: 4273521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4274030-4274095:1:exon

position:4274030:1
position: 4274030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4274095:1
position: 4274095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4274587-4275109:1:exon

position:4274587:1
position: 4274587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342858
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342858
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: serine-threonine kinase receptor-associated protein
translation: MAMRQTPLTCSGHTRPVVDLAFSGVTPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHSSRQWDFTQDSNYLLTGGQDKLLRIYDLNKPEAEPQEISGHTSGIKKALWCSDDKQILSADDKTVRLWDYATMTEAKSLSFNMSVSGMAYIPEGEILVLTYGRTIAFHSAVSLEPIKSFEAPATINSASLHPDKEFLVAGGEDFKLYKYDYNSGEELESYKGLGRPIHCVRFSPDGELYASGSEDGHPATLADVVGKTYGLWKCVLPQEDSGELAKPKLSFPEGAEEELEEIASENSDSIYSSTPR
SIO_010081: LOC125342858
subclass of: SO_0000673
so part of: LOC125342858
location: join(4264376..4264487,4265428..4265564,4269069..4269150,4269400..4269472,4270493..4270589,4271045..4271183,4272241..4272378,4273372..4273521,4274030..4274095,4274587..4274639)
location: region:4264376-4274639:1
so has part: feature:4264376-4264487:1:exon
so has part: feature:4265428-4265564:1:exon
so has part: feature:4269069-4269150:1:exon
so has part: feature:4269400-4269472:1:exon
so has part: feature:4270493-4270589:1:exon
so has part: feature:4271045-4271183:1:exon
so has part: feature:4272241-4272378:1:exon
so has part: feature:4273372-4273521:1:exon
so has part: feature:4274030-4274095:1:exon
so has part: feature:4274587-4274639:1:exon

XP_048191130.1
type: Protein
SIO_000068: ncbiprotein

position:4264376:1
position: 4264376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4274639:1
position: 4274639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4264376-4264487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4265428-4265564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4269069-4269150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4269400-4269472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4270493-4270589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4271045-4271183:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4272241-4272378:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4273372-4273521:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4274030-4274095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4274587-4274639:1:exon

Ptpro
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ptpro
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4278483..4289952)
location: region:4278483-4289952:-1
so has part: feature:4278483-4289952:-1:exon
subclass of: SO_0000010

125342857
type: Gene
SIO_000068: ncbigene

position:4278483:-1
position: 4278483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4289952:-1
position: 4289952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4278483-4289952:-1:exon

Ptpro
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ptpro
product: protein tyrosine phosphatase receptor type O
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048335171.1
SIO_010081: Ptpro
subclass of: SO_0000673
so part of: Ptpro
location: complement(join(4278483..4278587,4278886..4279021,4279708..4279861,4280581..4280703,4280850..4280985,4281496..4281572,4282643..4282733,4283693..4283774,4284645..4284680,4288269..4288337,4288784..4288904,4289826..4289952))
location: region:4278483-4289952:-1
so has part: feature:4289826-4289952:-1:exon
so has part: feature:4288784-4288904:-1:exon
so has part: feature:4288269-4288337:-1:exon
so has part: feature:4284645-4284680:-1:exon
so has part: feature:4283693-4283774:-1:exon
so has part: feature:4282643-4282733:-1:exon
so has part: feature:4281496-4281572:-1:exon
so has part: feature:4280850-4280985:-1:exon
so has part: feature:4280581-4280703:-1:exon
so has part: feature:4279708-4279861:-1:exon
so has part: feature:4278886-4279021:-1:exon
so has part: feature:4278483-4278587:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4289826-4289952:-1:exon

position:4289826:-1
position: 4289826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4288784-4288904:-1:exon

position:4288784:-1
position: 4288784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4288904:-1
position: 4288904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4288269-4288337:-1:exon

position:4288269:-1
position: 4288269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4288337:-1
position: 4288337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4284645-4284680:-1:exon

position:4284645:-1
position: 4284645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4284680:-1
position: 4284680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4283693-4283774:-1:exon

position:4283693:-1
position: 4283693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4283774:-1
position: 4283774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4282643-4282733:-1:exon

position:4282643:-1
position: 4282643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4282733:-1
position: 4282733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4281496-4281572:-1:exon

position:4281496:-1
position: 4281496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4281572:-1
position: 4281572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4280850-4280985:-1:exon

position:4280850:-1
position: 4280850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4280985:-1
position: 4280985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4280581-4280703:-1:exon

position:4280581:-1
position: 4280581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4280703:-1
position: 4280703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4279708-4279861:-1:exon

position:4279708:-1
position: 4279708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4279861:-1
position: 4279861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4278886-4279021:-1:exon

position:4278886:-1
position: 4278886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4279021:-1
position: 4279021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4278483-4278587:-1:exon

position:4278587:-1
position: 4278587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ptpro
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ptpro
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase O
translation: MNGNVVAISVLALLSTLLIALLLLTLLILRKKHLQMARECGARTFVNFASLEQDGKLPYNWSKNGLKKRKLTNPVQLDDFDSYIKDMAKDSDYKFSLQFEELKLVGLNIPHYAADLPLNHCKNRYTNILPYDFSRVKLVSVNGEEGADYINANYIPGYNSPQEYIATQGPLPETRSDFWKMVLQQKSQMIVMLTQCNEKRRVKCDHYWPFTPEPTAYGDITVEMLSEEDKEHWACRRFRVHYADETQDVTHFNYTXWPDHGVPSANAAESILQFVYLVRRHASKSKGPVVIHCSAGVGRTGTFIALDRLLQHVRDHEVRGHPGLVSEMRAHRMCMVQTEEQYIFIHQCVQLMWRKKRQQFRISDVIYENVSKS
SIO_010081: Ptpro
subclass of: SO_0000673
so part of: Ptpro
location: complement(join(4278483..4278587,4278886..4279021,4279708..4279861,4280581..4280703,4280850..4280985,4281496..4281572,4282643..4282733,4283693..4283774,4284645..4284680,4288269..4288337,4288784..4288896))
location: region:4278483-4288896:-1
so has part: feature:4288784-4288896:-1:exon
so has part: feature:4288269-4288337:-1:exon
so has part: feature:4284645-4284680:-1:exon
so has part: feature:4283693-4283774:-1:exon
so has part: feature:4282643-4282733:-1:exon
so has part: feature:4281496-4281572:-1:exon
so has part: feature:4280850-4280985:-1:exon
so has part: feature:4280581-4280703:-1:exon
so has part: feature:4279708-4279861:-1:exon
so has part: feature:4278886-4279021:-1:exon
so has part: feature:4278483-4278587:-1:exon

XP_048191128.1
type: Protein
SIO_000068: ncbiprotein

position:4288896:-1
position: 4288896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4288784-4288896:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4288269-4288337:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4284645-4284680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4283693-4283774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4282643-4282733:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4281496-4281572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4280850-4280985:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4280581-4280703:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4279708-4279861:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4278886-4279021:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4278483-4278587:-1:exon

Smco3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Smco3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4349353..4353498
location: region:4349353-4353498:1
so has part: feature:4349353-4353498:1:exon
subclass of: SO_0000010

125342873
type: Gene
SIO_000068: ncbigene

position:4349353:1
position: 4349353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4353498:1
position: 4353498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4349353-4353498:1:exon

Smco3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Smco3
product: single-pass membrane protein with coiled-coil domains 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048335197.1
SIO_010081: Smco3
subclass of: SO_0000673
so part of: Smco3
location: join(4349353..4349554,4352814..4353498)
location: region:4349353-4353498:1
so has part: feature:4349353-4349554:1:exon
so has part: feature:4352814-4353498:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4349353-4349554:1:exon

position:4349554:1
position: 4349554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4352814-4353498:1:exon

position:4352814:1
position: 4352814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Smco3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Smco3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: single-pass membrane and coiled-coil domain-containing protein 3
translation: MAHSDFLYPDNPRRRQEVNHLHQQLLGCLLDSFEATNELIGVLNTHLGCRLDSIEMRRHGTIKDNCDVLIRGVREIQRELQKVDEALRAKLEPTLYRKLXDVKEKETEKVAIVQKVISVILGEATSVASAVAVRLVGSEATTGLLHKLVAVLGHIGASLLGSVGVAVLGLGLDLLFRAILGAVEKSQLQAAIKSYEAHLVEFRSASRKYHQAILEVTDMVRRQKK
SIO_010081: Smco3
subclass of: SO_0000673
so part of: Smco3
location: 4352822..4353498
location: region:4352822-4353498:1
so has part: feature:4352822-4353498:1:exon

XP_048191154.1
type: Protein
SIO_000068: ncbiprotein

position:4352822:1
position: 4352822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4352822-4353498:1:exon

Wbp11
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Wbp11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4356770..4381584
location: region:4356770-4381584:1
so has part: feature:4356770-4381584:1:exon
subclass of: SO_0000010

125342736
type: Gene
SIO_000068: ncbigene

position:4356770:1
position: 4356770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4381584:1
position: 4381584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4356770-4381584:1:exon

Wbp11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Wbp11
product: WW domain binding protein 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335048.1
SIO_010081: Wbp11
subclass of: SO_0000673
so part of: Wbp11
location: join(4356770..4356904,4358116..4358238,4358879..4358910,4360016..4360109,4361964..4362160,4362877..4363010,4365741..4365940,4366048..4366239,4366319..4366416,4381441..4381584)
location: region:4356770-4381584:1
so has part: feature:4356770-4356904:1:exon
so has part: feature:4358116-4358238:1:exon
so has part: feature:4358879-4358910:1:exon
so has part: feature:4360016-4360109:1:exon
so has part: feature:4361964-4362160:1:exon
so has part: feature:4362877-4363010:1:exon
so has part: feature:4365741-4365940:1:exon
so has part: feature:4366048-4366239:1:exon
so has part: feature:4366319-4366416:1:exon
so has part: feature:4381441-4381584:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4356770-4356904:1:exon

position:4356904:1
position: 4356904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4358116-4358238:1:exon

position:4358116:1
position: 4358116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4358238:1
position: 4358238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4358879-4358910:1:exon

position:4358879:1
position: 4358879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4358910:1
position: 4358910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4360016-4360109:1:exon

position:4360016:1
position: 4360016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4360109:1
position: 4360109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4361964-4362160:1:exon

position:4361964:1
position: 4361964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4362160:1
position: 4362160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4362877-4363010:1:exon

position:4362877:1
position: 4362877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4363010:1
position: 4363010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4365741-4365940:1:exon

position:4365741:1
position: 4365741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4365940:1
position: 4365940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4366048-4366239:1:exon

position:4366048:1
position: 4366048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4366239:1
position: 4366239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4366319-4366416:1:exon

position:4366319:1
position: 4366319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4366416:1
position: 4366416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4381441-4381584:1:exon

position:4381441:1
position: 4381441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Wbp11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Wbp11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WW domain-binding protein 11
translation: MGRRSTSSTKSGKFMNPTDQARKEARKRELKKNKKQRMMVRAAVLKMKDPKQIIRDMEKLDEMEFNPVQQPQLNEKVLKDKRKKLRETFERILRLYEKENPDIYKELRKLEVEYEQKRAQLSQYFDAVKNAQHVEVESIPLPDMPHAPSNILIQDIPLPGAQPPSILKKTSAYGPQSRAVSILPLPGHGVPRLPPGRKPPGPPPGPPPPQVLQVYGRKVGFALDLPARRREADALYSPELAQRGHDEEASSTSEDDGYPEDMEPDKPGDSSDDSDSDRSDADSDADDFARRDDGERDHADDKKAGLSVRFADMPGKPRRKKKNMKELTPLQATMLRMGPLTESSADRKPASSSRKPRDPRPSHGVRFLPSDVRTSEIHAEPVQP
SIO_010081: Wbp11
subclass of: SO_0000673
so part of: Wbp11
location: join(4358175..4358238,4358879..4358910,4360016..4360109,4361964..4362160,4362877..4363010,4365741..4365940,4366048..4366239,4366319..4366416,4381441..4381584)
location: region:4358175-4381584:1
so has part: feature:4358175-4358238:1:exon
so has part: feature:4358879-4358910:1:exon
so has part: feature:4360016-4360109:1:exon
so has part: feature:4361964-4362160:1:exon
so has part: feature:4362877-4363010:1:exon
so has part: feature:4365741-4365940:1:exon
so has part: feature:4366048-4366239:1:exon
so has part: feature:4366319-4366416:1:exon
so has part: feature:4381441-4381584:1:exon

XP_048191005.1
type: Protein
SIO_000068: ncbiprotein

position:4358175:1
position: 4358175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4358175-4358238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4358879-4358910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4360016-4360109:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4361964-4362160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4362877-4363010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4365741-4365940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4366048-4366239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4366319-4366416:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4381441-4381584:1:exon

LOC125342915
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4408524..4461815
location: region:4408524-4461815:1
so has part: feature:4408524-4461815:1:exon
subclass of: SO_0000010

125342915
type: Gene
SIO_000068: ncbigene

position:4408524:1
position: 4408524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4461815:1
position: 4461815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4408524-4461815:1:exon

LOC125342915
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342915
product: activating transcription factor 7 interacting protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048335251.1
SIO_010081: LOC125342915
subclass of: SO_0000673
so part of: LOC125342915
location: join(4408524..4408583,4439643..4441408,4443899..4443985,4444681..4444826,4446143..4446280,4449083..4449148,4450022..4450095,4450529..4450617,4451705..4452361,4452806..4452870,4454667..4454745,4456255..4456422,4457369..4457551,4459480..4459595,4460820..4461815)
location: region:4408524-4461815:1
so has part: feature:4408524-4408583:1:exon
so has part: feature:4439643-4441408:1:exon
so has part: feature:4443899-4443985:1:exon
so has part: feature:4444681-4444826:1:exon
so has part: feature:4446143-4446280:1:exon
so has part: feature:4449083-4449148:1:exon
so has part: feature:4450022-4450095:1:exon
so has part: feature:4450529-4450617:1:exon
so has part: feature:4451705-4452361:1:exon
so has part: feature:4452806-4452870:1:exon
so has part: feature:4454667-4454745:1:exon
so has part: feature:4456255-4456422:1:exon
so has part: feature:4457369-4457551:1:exon
so has part: feature:4459480-4459595:1:exon
so has part: feature:4460820-4461815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4408524-4408583:1:exon

position:4408583:1
position: 4408583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4439643-4441408:1:exon

position:4439643:1
position: 4439643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4441408:1
position: 4441408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4443899-4443985:1:exon

position:4443899:1
position: 4443899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4443985:1
position: 4443985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4444681-4444826:1:exon

position:4444681:1
position: 4444681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4444826:1
position: 4444826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4446143-4446280:1:exon

position:4446143:1
position: 4446143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4446280:1
position: 4446280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4449083-4449148:1:exon

position:4449083:1
position: 4449083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4449148:1
position: 4449148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4450022-4450095:1:exon

position:4450022:1
position: 4450022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4450095:1
position: 4450095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4450529-4450617:1:exon

position:4450529:1
position: 4450529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4450617:1
position: 4450617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4451705-4452361:1:exon

position:4451705:1
position: 4451705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4452361:1
position: 4452361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4452806-4452870:1:exon

position:4452806:1
position: 4452806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4452870:1
position: 4452870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4454667-4454745:1:exon

position:4454667:1
position: 4454667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4454745:1
position: 4454745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4456255-4456422:1:exon

position:4456255:1
position: 4456255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4456422:1
position: 4456422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4457369-4457551:1:exon

position:4457369:1
position: 4457369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4457551:1
position: 4457551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4459480-4459595:1:exon

position:4459480:1
position: 4459480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4459595:1
position: 4459595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4460820-4461815:1:exon

position:4460820:1
position: 4460820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342915
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342915
product: activating transcription factor 7 interacting protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048335250.1
SIO_010081: LOC125342915
subclass of: SO_0000673
so part of: LOC125342915
location: join(4418355..4419425,4439643..4441408,4443899..4443985,4444681..4444826,4446143..4446280,4449083..4449148,4450022..4450095,4450529..4450617,4451705..4452361,4452806..4452870,4454667..4454745,4456255..4456422,4457369..4457551,4459480..4459595,4460820..4461815)
location: region:4418355-4461815:1
so has part: feature:4418355-4419425:1:exon
so has part: feature:4439643-4441408:1:exon
so has part: feature:4443899-4443985:1:exon
so has part: feature:4444681-4444826:1:exon
so has part: feature:4446143-4446280:1:exon
so has part: feature:4449083-4449148:1:exon
so has part: feature:4450022-4450095:1:exon
so has part: feature:4450529-4450617:1:exon
so has part: feature:4451705-4452361:1:exon
so has part: feature:4452806-4452870:1:exon
so has part: feature:4454667-4454745:1:exon
so has part: feature:4456255-4456422:1:exon
so has part: feature:4457369-4457551:1:exon
so has part: feature:4459480-4459595:1:exon
so has part: feature:4460820-4461815:1:exon

position:4418355:1
position: 4418355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4418355-4419425:1:exon

position:4419425:1
position: 4419425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4439643-4441408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4443899-4443985:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4444681-4444826:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446143-4446280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4449083-4449148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4450022-4450095:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4450529-4450617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4451705-4452361:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4452806-4452870:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4454667-4454745:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4456255-4456422:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4457369-4457551:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4459480-4459595:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4460820-4461815:1:exon

LOC125342915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activating transcription factor 7-interacting protein 1 isoform X1
translation: MHEDQRFEMDCIEEPQKKIFKARKTMRVSDRHQLEAVYKVRDELLKTDVRLLNGNHENGDVGGSLEGVDYIQEEEEEVNGIDGVCSDPEDSKAEREEAPCNLTVKVKTKQDDASNADPLSSDTLASESAPELSSEPASGEPAFGELAPGDPVSGHLAFGEPACSDRTSSEPASSERTRSELASSDRTSSELASSDQTSGELASSDRAAGAAAPGTVSDGIDSSPGDGDPSVGAPPGSPASADQAAAAHLAASCDPASEEAASGDLSSGDSIAGELASDKPVSEASAEASPGDLPAGDLSAGDLPAGDLPAADPSSVDDLPAGDAGCPGQASEGLVSSELASAEPASDEAAAGALTSESTVEPAFKPSSGSGCEPEAEMDYREQSGSKDEAFVKTHADDGKADQTPSKDSLDETDNMDMNADSPKEVLETDGTMICPDLPPEHEKKANGDAAAAGAVGDEAISSSMEVEPADKAEEDSATGLLGAARDETAAKDGSEESLEHADSMETDEIIPILEKLAPSEDELTCFSKSSLLPMEEANLDLEDKMEGSFGSPSKQESNESLPKEAFLVLSDEEDISCEKDESEELSQNAACSPAKVETNEKASKPEEEEPVVEEEEERPSEKNECSRRKRSKSEDIDNVQSKRRRYLEDEYEAELQVKITAKGDINQKLQKVVQWLLEEKLCALQCAVFDKTLAELKTRVEKIECNKRHKTVLTELQAKVARLTKRFGAAKEDLKKRQESPPNPPVSPGKPGNDINSNNNMVYRTAGTVRQMLESKRNVSENTPPSFPTPVNTVPSASLVPPAAAVVSSQPKLPAPVTSGSLTAAPLVPAPSAATVVATSQVPTGNPQPTISLQSLPVILHVPVAVPSQPQLLQSHPGTLVTNPPAGNVEFISVQSPPAVSGLTKNPVSLPPLPNPAKPGGVASVPSPSLPRNTTLAVQAVPTAHSIVQATRTSLPTVGPAGLYSPSNARGPIQMKIPISAFSTSSPAEHGGPPVPVPAPAPVPAPAPVPRPENQTNKPVDASVNKKAADSTSQSGKAPGSDSGGVIDLTMDDEENAASQDHKKLHHTPVPALASPQPLPRPLQPIQPAPPPPPLPQPAGVPTSGPSQTTIHLLPPAPTTVNVTHRPVTQVTTRLPVPRAPGNHQVVYTALPAPPAQAPLRGAAVPAPAVRQLNPPNSVTVRVPQTTTYVVNNGLTLGSAAGPQLTVHHRPPQVHTEAPRPVHPAPLPEAPQPQRLPPEAAGTALPQKPHLKLARVQSQNGIVLSWSVLEVDRACAAVDSYHLYAYHEEPSATAPSQWKKIGEVKALPLPMACTLTQFVSGSKYYFAVRAKDVFGRFGPFCDPQSTDVIASSQSS
SIO_010081: LOC125342915
subclass of: SO_0000673
so part of: LOC125342915
location: join(4419409..4419425,4439643..4441408,4443899..4443985,4444681..4444826,4446143..4446280,4449083..4449148,4450022..4450095,4450529..4450617,4451705..4452361,4452806..4452870,4454667..4454745,4456255..4456422,4457369..4457551,4459480..4459595,4460820..4461239)
location: region:4419409-4461239:1
so has part: feature:4419409-4419425:1:exon
so has part: feature:4439643-4441408:1:exon
so has part: feature:4443899-4443985:1:exon
so has part: feature:4444681-4444826:1:exon
so has part: feature:4446143-4446280:1:exon
so has part: feature:4449083-4449148:1:exon
so has part: feature:4450022-4450095:1:exon
so has part: feature:4450529-4450617:1:exon
so has part: feature:4451705-4452361:1:exon
so has part: feature:4452806-4452870:1:exon
so has part: feature:4454667-4454745:1:exon
so has part: feature:4456255-4456422:1:exon
so has part: feature:4457369-4457551:1:exon
so has part: feature:4459480-4459595:1:exon
so has part: feature:4460820-4461239:1:exon

XP_048191207.1
type: Protein
SIO_000068: ncbiprotein

position:4419409:1
position: 4419409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4461239:1
position: 4461239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4419409-4419425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4439643-4441408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4443899-4443985:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4444681-4444826:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446143-4446280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4449083-4449148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4450022-4450095:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4450529-4450617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4451705-4452361:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4452806-4452870:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4454667-4454745:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4456255-4456422:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4457369-4457551:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4459480-4459595:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4460820-4461239:1:exon

LOC125342915
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342915
product: activating transcription factor 7 interacting protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048335252.1
SIO_010081: LOC125342915
subclass of: SO_0000673
so part of: LOC125342915
location: join(4432924..4434021,4439643..4441408,4443899..4443985,4444681..4444826,4446143..4446280,4449083..4449148,4450022..4450095,4450529..4450617,4451705..4452361,4452806..4452870,4454667..4454745,4456255..4456422,4457369..4457551,4459480..4459595,4460820..4461815)
location: region:4432924-4461815:1
so has part: feature:4432924-4434021:1:exon
so has part: feature:4439643-4441408:1:exon
so has part: feature:4443899-4443985:1:exon
so has part: feature:4444681-4444826:1:exon
so has part: feature:4446143-4446280:1:exon
so has part: feature:4449083-4449148:1:exon
so has part: feature:4450022-4450095:1:exon
so has part: feature:4450529-4450617:1:exon
so has part: feature:4451705-4452361:1:exon
so has part: feature:4452806-4452870:1:exon
so has part: feature:4454667-4454745:1:exon
so has part: feature:4456255-4456422:1:exon
so has part: feature:4457369-4457551:1:exon
so has part: feature:4459480-4459595:1:exon
so has part: feature:4460820-4461815:1:exon

position:4432924:1
position: 4432924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4432924-4434021:1:exon

position:4434021:1
position: 4434021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4439643-4441408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4443899-4443985:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4444681-4444826:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446143-4446280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4449083-4449148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4450022-4450095:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4450529-4450617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4451705-4452361:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4452806-4452870:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4454667-4454745:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4456255-4456422:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4457369-4457551:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4459480-4459595:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4460820-4461815:1:exon

LOC125342915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activating transcription factor 7-interacting protein 1 isoform X2
translation: MDCIEEPQKKIFKARKTMRVSDRHQLEAVYKVRDELLKTDVRLLNGNHENGDVGGSLEGVDYIQEEEEEVNGIDGVCSDPEDSKAEREEAPCNLTVKVKTKQDDASNADPLSSDTLASESAPELSSEPASGEPAFGELAPGDPVSGHLAFGEPACSDRTSSEPASSERTRSELASSDRTSSELASSDQTSGELASSDRAAGAAAPGTVSDGIDSSPGDGDPSVGAPPGSPASADQAAAAHLAASCDPASEEAASGDLSSGDSIAGELASDKPVSEASAEASPGDLPAGDLSAGDLPAGDLPAADPSSVDDLPAGDAGCPGQASEGLVSSELASAEPASDEAAAGALTSESTVEPAFKPSSGSGCEPEAEMDYREQSGSKDEAFVKTHADDGKADQTPSKDSLDETDNMDMNADSPKEVLETDGTMICPDLPPEHEKKANGDAAAAGAVGDEAISSSMEVEPADKAEEDSATGLLGAARDETAAKDGSEESLEHADSMETDEIIPILEKLAPSEDELTCFSKSSLLPMEEANLDLEDKMEGSFGSPSKQESNESLPKEAFLVLSDEEDISCEKDESEELSQNAACSPAKVETNEKASKPEEEEPVVEEEEERPSEKNECSRRKRSKSEDIDNVQSKRRRYLEDEYEAELQVKITAKGDINQKLQKVVQWLLEEKLCALQCAVFDKTLAELKTRVEKIECNKRHKTVLTELQAKVARLTKRFGAAKEDLKKRQESPPNPPVSPGKPGNDINSNNNMVYRTAGTVRQMLESKRNVSENTPPSFPTPVNTVPSASLVPPAAAVVSSQPKLPAPVTSGSLTAAPLVPAPSAATVVATSQVPTGNPQPTISLQSLPVILHVPVAVPSQPQLLQSHPGTLVTNPPAGNVEFISVQSPPAVSGLTKNPVSLPPLPNPAKPGGVASVPSPSLPRNTTLAVQAVPTAHSIVQATRTSLPTVGPAGLYSPSNARGPIQMKIPISAFSTSSPAEHGGPPVPVPAPAPVPAPAPVPRPENQTNKPVDASVNKKAADSTSQSGKAPGSDSGGVIDLTMDDEENAASQDHKKLHHTPVPALASPQPLPRPLQPIQPAPPPPPLPQPAGVPTSGPSQTTIHLLPPAPTTVNVTHRPVTQVTTRLPVPRAPGNHQVVYTALPAPPAQAPLRGAAVPAPAVRQLNPPNSVTVRVPQTTTYVVNNGLTLGSAAGPQLTVHHRPPQVHTEAPRPVHPAPLPEAPQPQRLPPEAAGTALPQKPHLKLARVQSQNGIVLSWSVLEVDRACAAVDSYHLYAYHEEPSATAPSQWKKIGEVKALPLPMACTLTQFVSGSKYYFAVRAKDVFGRFGPFCDPQSTDVIASSQSS
SIO_010081: LOC125342915
subclass of: SO_0000673
so part of: LOC125342915
location: join(4439650..4441408,4443899..4443985,4444681..4444826,4446143..4446280,4449083..4449148,4450022..4450095,4450529..4450617,4451705..4452361,4452806..4452870,4454667..4454745,4456255..4456422,4457369..4457551,4459480..4459595,4460820..4461239)
location: region:4439650-4461239:1
so has part: feature:4439650-4441408:1:exon
so has part: feature:4443899-4443985:1:exon
so has part: feature:4444681-4444826:1:exon
so has part: feature:4446143-4446280:1:exon
so has part: feature:4449083-4449148:1:exon
so has part: feature:4450022-4450095:1:exon
so has part: feature:4450529-4450617:1:exon
so has part: feature:4451705-4452361:1:exon
so has part: feature:4452806-4452870:1:exon
so has part: feature:4454667-4454745:1:exon
so has part: feature:4456255-4456422:1:exon
so has part: feature:4457369-4457551:1:exon
so has part: feature:4459480-4459595:1:exon
so has part: feature:4460820-4461239:1:exon

XP_048191208.1
type: Protein
SIO_000068: ncbiprotein

position:4439650:1
position: 4439650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4439650-4441408:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4443899-4443985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4444681-4444826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4446143-4446280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4449083-4449148:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4450022-4450095:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4450529-4450617:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4451705-4452361:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4452806-4452870:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4454667-4454745:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4456255-4456422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4457369-4457551:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4459480-4459595:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4460820-4461239:1:exon

LOC125342915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activating transcription factor 7-interacting protein 1 isoform X2
translation: MDCIEEPQKKIFKARKTMRVSDRHQLEAVYKVRDELLKTDVRLLNGNHENGDVGGSLEGVDYIQEEEEEVNGIDGVCSDPEDSKAEREEAPCNLTVKVKTKQDDASNADPLSSDTLASESAPELSSEPASGEPAFGELAPGDPVSGHLAFGEPACSDRTSSEPASSERTRSELASSDRTSSELASSDQTSGELASSDRAAGAAAPGTVSDGIDSSPGDGDPSVGAPPGSPASADQAAAAHLAASCDPASEEAASGDLSSGDSIAGELASDKPVSEASAEASPGDLPAGDLSAGDLPAGDLPAADPSSVDDLPAGDAGCPGQASEGLVSSELASAEPASDEAAAGALTSESTVEPAFKPSSGSGCEPEAEMDYREQSGSKDEAFVKTHADDGKADQTPSKDSLDETDNMDMNADSPKEVLETDGTMICPDLPPEHEKKANGDAAAAGAVGDEAISSSMEVEPADKAEEDSATGLLGAARDETAAKDGSEESLEHADSMETDEIIPILEKLAPSEDELTCFSKSSLLPMEEANLDLEDKMEGSFGSPSKQESNESLPKEAFLVLSDEEDISCEKDESEELSQNAACSPAKVETNEKASKPEEEEPVVEEEEERPSEKNECSRRKRSKSEDIDNVQSKRRRYLEDEYEAELQVKITAKGDINQKLQKVVQWLLEEKLCALQCAVFDKTLAELKTRVEKIECNKRHKTVLTELQAKVARLTKRFGAAKEDLKKRQESPPNPPVSPGKPGNDINSNNNMVYRTAGTVRQMLESKRNVSENTPPSFPTPVNTVPSASLVPPAAAVVSSQPKLPAPVTSGSLTAAPLVPAPSAATVVATSQVPTGNPQPTISLQSLPVILHVPVAVPSQPQLLQSHPGTLVTNPPAGNVEFISVQSPPAVSGLTKNPVSLPPLPNPAKPGGVASVPSPSLPRNTTLAVQAVPTAHSIVQATRTSLPTVGPAGLYSPSNARGPIQMKIPISAFSTSSPAEHGGPPVPVPAPAPVPAPAPVPRPENQTNKPVDASVNKKAADSTSQSGKAPGSDSGGVIDLTMDDEENAASQDHKKLHHTPVPALASPQPLPRPLQPIQPAPPPPPLPQPAGVPTSGPSQTTIHLLPPAPTTVNVTHRPVTQVTTRLPVPRAPGNHQVVYTALPAPPAQAPLRGAAVPAPAVRQLNPPNSVTVRVPQTTTYVVNNGLTLGSAAGPQLTVHHRPPQVHTEAPRPVHPAPLPEAPQPQRLPPEAAGTALPQKPHLKLARVQSQNGIVLSWSVLEVDRACAAVDSYHLYAYHEEPSATAPSQWKKIGEVKALPLPMACTLTQFVSGSKYYFAVRAKDVFGRFGPFCDPQSTDVIASSQSS
SIO_010081: LOC125342915
subclass of: SO_0000673
so part of: LOC125342915
location: join(4439650..4441408,4443899..4443985,4444681..4444826,4446143..4446280,4449083..4449148,4450022..4450095,4450529..4450617,4451705..4452361,4452806..4452870,4454667..4454745,4456255..4456422,4457369..4457551,4459480..4459595,4460820..4461239)
location: region:4439650-4461239:1
so has part: feature:4439650-4441408:1:exon
so has part: feature:4443899-4443985:1:exon
so has part: feature:4444681-4444826:1:exon
so has part: feature:4446143-4446280:1:exon
so has part: feature:4449083-4449148:1:exon
so has part: feature:4450022-4450095:1:exon
so has part: feature:4450529-4450617:1:exon
so has part: feature:4451705-4452361:1:exon
so has part: feature:4452806-4452870:1:exon
so has part: feature:4454667-4454745:1:exon
so has part: feature:4456255-4456422:1:exon
so has part: feature:4457369-4457551:1:exon
so has part: feature:4459480-4459595:1:exon
so has part: feature:4460820-4461239:1:exon

XP_048191209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4439650-4441408:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4443899-4443985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4444681-4444826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4446143-4446280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4449083-4449148:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4450022-4450095:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4450529-4450617:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4451705-4452361:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4452806-4452870:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4454667-4454745:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4456255-4456422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4457369-4457551:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4459480-4459595:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4460820-4461239:1:exon

LOC125342917
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4457880..4458806)
location: region:4457880-4458806:-1
so has part: feature:4457880-4458806:-1:exon
subclass of: SO_0000011

125342917
type: Gene
SIO_000068: ncbigene

position:4457880:-1
position: 4457880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4458806:-1
position: 4458806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4457880-4458806:-1:exon

LOC125342917
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342917
product: uncharacterized LOC125342917
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007209275.1
SIO_010081: LOC125342917
subclass of: SO_0000673
so part of: LOC125342917
location: complement(join(4457880..4458358,4458576..4458806))
location: region:4457880-4458806:-1
so has part: feature:4458576-4458806:-1:exon
so has part: feature:4457880-4458358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4458576-4458806:-1:exon

position:4458576:-1
position: 4458576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4457880-4458358:-1:exon

position:4458358:-1
position: 4458358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Plbd1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Plbd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4465724..4492813)
location: region:4465724-4492813:-1
so has part: feature:4465724-4492813:-1:exon
subclass of: SO_0000010

125342916
type: Gene
SIO_000068: ncbigene

position:4465724:-1
position: 4465724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4492813:-1
position: 4492813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4465724-4492813:-1:exon

Plbd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Plbd1
product: phospholipase B domain containing 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048335253.1
SIO_010081: Plbd1
subclass of: SO_0000673
so part of: Plbd1
location: complement(join(4465724..4466050,4466929..4467035,4467604..4467789,4468232..4468372,4468467..4468667,4472549..4472693,4474456..4474593,4475377..4475515,4477504..4477587,4479008..4479227,4483392..4483547,4488444..4488446,4492809..4492813))
location: region:4465724-4492813:-1
so has part: feature:4492809-4492813:-1:exon
so has part: feature:4488444-4488446:-1:exon
so has part: feature:4483392-4483547:-1:exon
so has part: feature:4479008-4479227:-1:exon
so has part: feature:4477504-4477587:-1:exon
so has part: feature:4475377-4475515:-1:exon
so has part: feature:4474456-4474593:-1:exon
so has part: feature:4472549-4472693:-1:exon
so has part: feature:4468467-4468667:-1:exon
so has part: feature:4468232-4468372:-1:exon
so has part: feature:4467604-4467789:-1:exon
so has part: feature:4466929-4467035:-1:exon
so has part: feature:4465724-4466050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4492809-4492813:-1:exon

position:4492809:-1
position: 4492809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4488444-4488446:-1:exon

position:4488444:-1
position: 4488444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4488446:-1
position: 4488446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4483392-4483547:-1:exon

position:4483392:-1
position: 4483392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4483547:-1
position: 4483547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4479008-4479227:-1:exon

position:4479008:-1
position: 4479008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4479227:-1
position: 4479227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4477504-4477587:-1:exon

position:4477504:-1
position: 4477504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4477587:-1
position: 4477587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4475377-4475515:-1:exon

position:4475377:-1
position: 4475377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4475515:-1
position: 4475515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4474456-4474593:-1:exon

position:4474456:-1
position: 4474456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4474593:-1
position: 4474593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4472549-4472693:-1:exon

position:4472549:-1
position: 4472549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4472693:-1
position: 4472693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4468467-4468667:-1:exon

position:4468467:-1
position: 4468467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4468667:-1
position: 4468667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4468232-4468372:-1:exon

position:4468232:-1
position: 4468232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4468372:-1
position: 4468372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4467604-4467789:-1:exon

position:4467604:-1
position: 4467604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4467789:-1
position: 4467789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4466929-4467035:-1:exon

position:4466929:-1
position: 4466929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4467035:-1
position: 4467035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4465724-4466050:-1:exon

position:4466050:-1
position: 4466050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Plbd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Plbd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase B-like 1
translation: MASGGLGAPGRLPLLLPLLLLSWAAGRGAQDTPEGFYYGTAYWMPSEKTVVVRNILDKNGDAYGFYNNSMHSTGWGILEIRVGYGAQTLSNEVLMFVAGFLEGYLTAPHMNDHFTNLYPQLIKKRSLMDKVKDFLEKQDAWTRDNIKQAREDPFWRHAGYVMAQMDGLYLGALRRAMTERMKPLTMFQIQFLNAVGDLLDLIPSLSPSKFPGMNRKRWDMGHCSALIKVLPGFENIIFAHSSWYTYAAMLRIYKHWDFNLKDMDTNSNRHSFSSYPGFLESLDDFYILSSGLILLQTTNSVYNKTLLKFVVPESLLAWQRVRVANMMASSGQEWAEIFSKYNSGTYNNQYMILDTNKVRPGISLDRGTLYIVEQIPTFVEHSDQTEILRRGYWPSYNIPFHKKIYSWSGYPLLVKKLGLDYSYDLAPRAKIFRRDQGTVTNVKSMKYIMRYNNYEKEPYSKGDPCSTICCREDLSALNPSPGGCYDTKVSDIFLASKFIAYAISGPTVQDGLPVFSWRPFNRTLHQGMPERYNFDFVLMRPLLNES
SIO_010081: Plbd1
subclass of: SO_0000673
so part of: Plbd1
location: complement(join(4465874..4466050,4466929..4467035,4467604..4467789,4468232..4468372,4468467..4468667,4472549..4472693,4474456..4474593,4475377..4475515,4477504..4477587,4479008..4479227,4483392..4483494))
location: region:4465874-4483494:-1
so has part: feature:4483392-4483494:-1:exon
so has part: feature:4479008-4479227:-1:exon
so has part: feature:4477504-4477587:-1:exon
so has part: feature:4475377-4475515:-1:exon
so has part: feature:4474456-4474593:-1:exon
so has part: feature:4472549-4472693:-1:exon
so has part: feature:4468467-4468667:-1:exon
so has part: feature:4468232-4468372:-1:exon
so has part: feature:4467604-4467789:-1:exon
so has part: feature:4466929-4467035:-1:exon
so has part: feature:4465874-4466050:-1:exon

XP_048191210.1
type: Protein
SIO_000068: ncbiprotein

position:4465874:-1
position: 4465874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4483494:-1
position: 4483494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4483392-4483494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4479008-4479227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4477504-4477587:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4475377-4475515:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4474456-4474593:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4472549-4472693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4468467-4468667:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4468232-4468372:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4467604-4467789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4466929-4467035:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4465874-4466050:-1:exon

Gucy2c
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Gucy2c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4484790..4508651)
location: region:4484790-4508651:-1
so has part: feature:4484790-4508651:-1:exon
subclass of: SO_0000010

125342737
type: Gene
SIO_000068: ncbigene

position:4484790:-1
position: 4484790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4508651:-1
position: 4508651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4484790-4508651:-1:exon

Gucy2c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Gucy2c
product: guanylate cyclase 2C
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335049.1
SIO_010081: Gucy2c
subclass of: SO_0000673
so part of: Gucy2c
location: complement(join(4484790..4484939,4486079..4486155,4487356..4487450,4487560..4487659,4488665..4488840,4490248..4490440,4491227..4491384,4491973..4492063,4492775..4492872,4493313..4493443,4494131..4494263,4494741..4494827,4495753..4495857,4496170..4496241,4496570..4496632,4498835..4498940,4499078..4499159,4499974..4500085,4500594..4500679,4501015..4501150,4502653..4502773,4503358..4503454,4503873..4503994,4505373..4505591,4506282..4506346,4507424..4507536,4508417..4508651))
location: region:4484790-4508651:-1
so has part: feature:4508417-4508651:-1:exon
so has part: feature:4507424-4507536:-1:exon
so has part: feature:4506282-4506346:-1:exon
so has part: feature:4505373-4505591:-1:exon
so has part: feature:4503873-4503994:-1:exon
so has part: feature:4503358-4503454:-1:exon
so has part: feature:4502653-4502773:-1:exon
so has part: feature:4501015-4501150:-1:exon
so has part: feature:4500594-4500679:-1:exon
so has part: feature:4499974-4500085:-1:exon
so has part: feature:4499078-4499159:-1:exon
so has part: feature:4498835-4498940:-1:exon
so has part: feature:4496570-4496632:-1:exon
so has part: feature:4496170-4496241:-1:exon
so has part: feature:4495753-4495857:-1:exon
so has part: feature:4494741-4494827:-1:exon
so has part: feature:4494131-4494263:-1:exon
so has part: feature:4493313-4493443:-1:exon
so has part: feature:4492775-4492872:-1:exon
so has part: feature:4491973-4492063:-1:exon
so has part: feature:4491227-4491384:-1:exon
so has part: feature:4490248-4490440:-1:exon
so has part: feature:4488665-4488840:-1:exon
so has part: feature:4487560-4487659:-1:exon
so has part: feature:4487356-4487450:-1:exon
so has part: feature:4486079-4486155:-1:exon
so has part: feature:4484790-4484939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4508417-4508651:-1:exon

position:4508417:-1
position: 4508417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4507424-4507536:-1:exon

position:4507424:-1
position: 4507424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4507536:-1
position: 4507536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4506282-4506346:-1:exon

position:4506282:-1
position: 4506282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4506346:-1
position: 4506346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4505373-4505591:-1:exon

position:4505373:-1
position: 4505373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4505591:-1
position: 4505591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4503873-4503994:-1:exon

position:4503873:-1
position: 4503873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4503994:-1
position: 4503994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4503358-4503454:-1:exon

position:4503358:-1
position: 4503358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4503454:-1
position: 4503454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4502653-4502773:-1:exon

position:4502653:-1
position: 4502653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4502773:-1
position: 4502773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4501015-4501150:-1:exon

position:4501015:-1
position: 4501015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4501150:-1
position: 4501150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4500594-4500679:-1:exon

position:4500594:-1
position: 4500594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4500679:-1
position: 4500679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4499974-4500085:-1:exon

position:4499974:-1
position: 4499974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4500085:-1
position: 4500085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4499078-4499159:-1:exon

position:4499078:-1
position: 4499078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4499159:-1
position: 4499159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4498835-4498940:-1:exon

position:4498835:-1
position: 4498835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4498940:-1
position: 4498940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4496570-4496632:-1:exon

position:4496570:-1
position: 4496570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4496632:-1
position: 4496632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4496170-4496241:-1:exon

position:4496170:-1
position: 4496170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4496241:-1
position: 4496241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4495753-4495857:-1:exon

position:4495753:-1
position: 4495753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4495857:-1
position: 4495857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4494741-4494827:-1:exon

position:4494741:-1
position: 4494741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4494827:-1
position: 4494827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4494131-4494263:-1:exon

position:4494131:-1
position: 4494131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4494263:-1
position: 4494263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4493313-4493443:-1:exon

position:4493313:-1
position: 4493313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4493443:-1
position: 4493443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4492775-4492872:-1:exon

position:4492775:-1
position: 4492775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4492872:-1
position: 4492872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4491973-4492063:-1:exon

position:4491973:-1
position: 4491973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4492063:-1
position: 4492063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4491227-4491384:-1:exon

position:4491227:-1
position: 4491227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4491384:-1
position: 4491384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4490248-4490440:-1:exon

position:4490248:-1
position: 4490248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4490440:-1
position: 4490440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4488665-4488840:-1:exon

position:4488665:-1
position: 4488665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4488840:-1
position: 4488840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4487560-4487659:-1:exon

position:4487560:-1
position: 4487560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4487659:-1
position: 4487659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4487356-4487450:-1:exon

position:4487356:-1
position: 4487356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4487450:-1
position: 4487450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4486079-4486155:-1:exon

position:4486079:-1
position: 4486079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4486155:-1
position: 4486155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4484790-4484939:-1:exon

position:4484939:-1
position: 4484939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gucy2c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Gucy2c
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: guanylyl cyclase C
translation: MAPAGSIPALLCCCCCCWLFPQPGLAFWASQVSRNCDNGSYQLSVLMMNNSAFPESHGNLEAAVNLGLDIVRTRLQQAGIRVVVNASFIYSDGLIQNSGDCRSSTCEGLDLLRTITRKNNMGCVLMGPSCTYATYQMYLDTQLSYPMLSAGSFGLSCDYKETLTRLMAPARKLLYFLVDFWKASDLPFKPFSWNSSYVYKDGAEPSEDCFWYLNALEAGVSYFSQVLNFKETLRRQDQFQEFLANQHRKSNVIVTCGSPENISTLIGNQAVDGNTVIILVDLFNDHYFDDAATAPDYMNNVLVLTLAPGESIVNSSAFSRGLLPGKQDFAFAYLDGTLLFGHMLQIFLESGEAITTSGFSHAFRNLTFQGHAGPVTLDDWGDIDNTMALLYTSVDTRKYKLLLTYDTHLNRTQAKDTSPSFIWKNHRLPNDVPGLGPQVLLIAVFTLTGTVVLLLLIALLVLRKYQRDNELRQKKWSHIPSDCILPLETNEAGPVSLKIDEDKRRDAMQRLPQWKYDKKRVILKDLKHSDGDFTEKQKIELNKLLQSDYYNLTKFYGTTRLDARVFAVIECCERGSLREVLNDTISYPDGTFMDWEFKISVLYDIAKGMSYLHASKIEVHGRLKSTNCVVDSRMVVKITDFGCNSILPPRKDLWTAPEHLRGGALSQKGDAYSFGVVGQEIVLRKETFHTLSCRSQSEKIFRVENYDGVRPFRPDLFLETAEENELEVYLLIKSCWEEXPERRPDFKKIESTLAKIFGLFHDQKNESYMDTLIRRLQLYSRXLEHLVEERTQLYKAERDRADQLNFMLLPRLVVQSLKEKGVVEPELYEEVTVYFSDIVGFTTICKYSTPMEVVDMLNHMYRSFDHIVDRHDVYKVETIGDAYVVASGLPQRNGNRHAVDIAKMALDILSFMGTFELEHLPGLPVWIRIGVHSGPCAAGVVGIKMPRYCLFGDTVNTASRMESTGLPLRIHMSSSTVAILRRTQFQFLYEERGETYLKGRGTETTYWLTGMKDQDYHLPPPPTVENQQRLQAEFSNMIVSALQRRXPRPAASYQTGSLEYLHLNTPDPDDTYF
SIO_010081: Gucy2c
subclass of: SO_0000673
so part of: Gucy2c
location: complement(join(4484790..4484939,4486079..4486155,4487356..4487450,4487560..4487659,4488665..4488840,4490248..4490440,4491227..4491384,4491973..4492063,4492775..4492872,4493313..4493443,4494131..4494263,4494741..4494827,4495753..4495857,4496170..4496241,4496570..4496632,4498835..4498940,4499078..4499159,4499974..4500085,4500594..4500679,4501015..4501150,4502653..4502773,4503358..4503454,4503873..4503994,4505373..4505591,4506282..4506346,4507424..4507536,4508417..4508651))
location: region:4484790-4508651:-1
so has part: feature:4508417-4508651:-1:exon
so has part: feature:4507424-4507536:-1:exon
so has part: feature:4506282-4506346:-1:exon
so has part: feature:4505373-4505591:-1:exon
so has part: feature:4503873-4503994:-1:exon
so has part: feature:4503358-4503454:-1:exon
so has part: feature:4502653-4502773:-1:exon
so has part: feature:4501015-4501150:-1:exon
so has part: feature:4500594-4500679:-1:exon
so has part: feature:4499974-4500085:-1:exon
so has part: feature:4499078-4499159:-1:exon
so has part: feature:4498835-4498940:-1:exon
so has part: feature:4496570-4496632:-1:exon
so has part: feature:4496170-4496241:-1:exon
so has part: feature:4495753-4495857:-1:exon
so has part: feature:4494741-4494827:-1:exon
so has part: feature:4494131-4494263:-1:exon
so has part: feature:4493313-4493443:-1:exon
so has part: feature:4492775-4492872:-1:exon
so has part: feature:4491973-4492063:-1:exon
so has part: feature:4491227-4491384:-1:exon
so has part: feature:4490248-4490440:-1:exon
so has part: feature:4488665-4488840:-1:exon
so has part: feature:4487560-4487659:-1:exon
so has part: feature:4487356-4487450:-1:exon
so has part: feature:4486079-4486155:-1:exon
so has part: feature:4484790-4484939:-1:exon

XP_048191006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4508417-4508651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4507424-4507536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4506282-4506346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4505373-4505591:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4503873-4503994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4503358-4503454:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4502653-4502773:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4501015-4501150:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4500594-4500679:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4499974-4500085:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4499078-4499159:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4498835-4498940:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4496570-4496632:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4496170-4496241:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4495753-4495857:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4494741-4494827:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4494131-4494263:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4493313-4493443:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4492775-4492872:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4491973-4492063:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4491227-4491384:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4490248-4490440:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4488665-4488840:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4487560-4487659:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4487356-4487450:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4486079-4486155:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4484790-4484939:-1:exon

Grin2b
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Grin2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4563745..4590289
location: region:4563745-4590289:1
so has part: feature:4563745-4590289:1:exon
subclass of: SO_0000010

125342738
type: Gene
SIO_000068: ncbigene

position:4563745:1
position: 4563745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4590289:1
position: 4590289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4563745-4590289:1:exon

Grin2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Grin2b
product: glutamate ionotropic receptor NMDA type subunit 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335050.1
SIO_010081: Grin2b
subclass of: SO_0000673
so part of: Grin2b
location: join(4563745..4563807,4564207..4564320,4572360..4572533,4574971..4575173,4575541..4575712,4576235..4576388,4578650..4578775,4580075..4580304,4584002..4584162,4585082..4585269,4586873..4587111,4588370..4589308,4589354..4590289)
location: region:4563745-4590289:1
so has part: feature:4563745-4563807:1:exon
so has part: feature:4564207-4564320:1:exon
so has part: feature:4572360-4572533:1:exon
so has part: feature:4574971-4575173:1:exon
so has part: feature:4575541-4575712:1:exon
so has part: feature:4576235-4576388:1:exon
so has part: feature:4578650-4578775:1:exon
so has part: feature:4580075-4580304:1:exon
so has part: feature:4584002-4584162:1:exon
so has part: feature:4585082-4585269:1:exon
so has part: feature:4586873-4587111:1:exon
so has part: feature:4588370-4589308:1:exon
so has part: feature:4589354-4590289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4563745-4563807:1:exon

position:4563807:1
position: 4563807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4564207-4564320:1:exon

position:4564207:1
position: 4564207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4564320:1
position: 4564320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4572360-4572533:1:exon

position:4572360:1
position: 4572360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4572533:1
position: 4572533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4574971-4575173:1:exon

position:4574971:1
position: 4574971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4575173:1
position: 4575173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4575541-4575712:1:exon

position:4575541:1
position: 4575541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4575712:1
position: 4575712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4576235-4576388:1:exon

position:4576235:1
position: 4576235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4576388:1
position: 4576388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4578650-4578775:1:exon

position:4578650:1
position: 4578650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4578775:1
position: 4578775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4580075-4580304:1:exon

position:4580075:1
position: 4580075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4580304:1
position: 4580304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4584002-4584162:1:exon

position:4584002:1
position: 4584002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4584162:1
position: 4584162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4585082-4585269:1:exon

position:4585082:1
position: 4585082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4585269:1
position: 4585269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4586873-4587111:1:exon

position:4586873:1
position: 4586873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4587111:1
position: 4587111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4588370-4589308:1:exon

position:4588370:1
position: 4588370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4589308:1
position: 4589308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4589354-4590289:1:exon

position:4589354:1
position: 4589354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Grin2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Grin2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 2B
translation: MDVFKTKGEDPLPWDSSGDSRVPDQCHLRGRNLSFSEDGYQMHPKLVIILHQQGEEVGAAHEGRESENPLPQPPNTPRLKLPVIPTTAWKAEIYGDRGRPCRQINQQGYGGYAGRREVGKWKDKSLQMKYYVWPRMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTCMRNTVPCQKRIISENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEMHAYMGKFNQRGVDDALLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQIDLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFICEHLFYWQFRHCFMGVCSGKPGMVFSISRGIYSCIHGVAIEERQSVMNSPTATMNNTHSNILRLLRTAKNMANLSGVNGSPQSALDFIRRESSVYDISEHRRSFTHSDCKSYNPPCEENLFSDYISEVERTFGNLQLKESNVYQDHYHHHHHRPHSIGSTSSIDGLYDCDNPPFTTQPRPLGKKPLDLGPPPAKHGQLGDLYGKFSFKSDRYGHDDLIRSDASDISTHTVTYGNIEGNAAKRRKQQYKDSLKKRPASAKSRREFDEIELAYRRRPARSPDHKRYFRDKEGLRDFYLDQFRPKENSPHWEHVDLTDIYKERGSDGFKRDSVSAGGPACANRPHLGGGGVVGGVPAPWEKSLGAVDWDDRAAGNFCRSCPSKLHNYTAAAVPGQNSGRQACIRCEACKKAGNLYDISEDNSLQDLEPPSGPVALPPGAAPSSTKYPQSPTNSKAQKKSRNRLRRQHSYDTFVDLQKEEAALAPRSVSLKDKSRFLDGSPYAHMFDMAAGEGSFANSKSSVPTAGHHHHNNPGGGGGYMLSKSLYPDRVTQNPFIPTFGDDQCLLHGSKSHFFRQPTVAGAAAAAAAKARPDFRGLVANKPAVSALHGAAPGHFQKDLCIGNQSNPCVPKNKNPRAFNGSSNGHVYEKLSSIESDV
SIO_010081: Grin2b
subclass of: SO_0000673
so part of: Grin2b
location: join(4563745..4563807,4564207..4564320,4572360..4572533,4574971..4575173,4575541..4575712,4576235..4576388,4578650..4578775,4580075..4580304,4584002..4584162,4585082..4585269,4586873..4587111,4588370..4589308,4589354..4590289)
location: region:4563745-4590289:1
so has part: feature:4563745-4563807:1:exon
so has part: feature:4564207-4564320:1:exon
so has part: feature:4572360-4572533:1:exon
so has part: feature:4574971-4575173:1:exon
so has part: feature:4575541-4575712:1:exon
so has part: feature:4576235-4576388:1:exon
so has part: feature:4578650-4578775:1:exon
so has part: feature:4580075-4580304:1:exon
so has part: feature:4584002-4584162:1:exon
so has part: feature:4585082-4585269:1:exon
so has part: feature:4586873-4587111:1:exon
so has part: feature:4588370-4589308:1:exon
so has part: feature:4589354-4590289:1:exon

XP_048191007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4563745-4563807:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4564207-4564320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4572360-4572533:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4574971-4575173:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4575541-4575712:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4576235-4576388:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4578650-4578775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4580075-4580304:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4584002-4584162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4585082-4585269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4586873-4587111:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4588370-4589308:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4589354-4590289:1:exon

Gsg1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Gsg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4644218..4649352
location: region:4644218-4649352:1
so has part: feature:4644218-4649352:1:exon
subclass of: SO_0000010

125342739
type: Gene
SIO_000068: ncbigene

position:4644218:1
position: 4644218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4649352:1
position: 4649352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4644218-4649352:1:exon

Gsg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Gsg1
product: germ cell associated 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335051.1
SIO_010081: Gsg1
subclass of: SO_0000673
so part of: Gsg1
location: join(4644218..4644224,4646463..4646784,4647033..4647080,4647902..4648054,4648640..4648751,4649031..4649352)
location: region:4644218-4649352:1
so has part: feature:4644218-4644224:1:exon
so has part: feature:4646463-4646784:1:exon
so has part: feature:4647033-4647080:1:exon
so has part: feature:4647902-4648054:1:exon
so has part: feature:4648640-4648751:1:exon
so has part: feature:4649031-4649352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4644218-4644224:1:exon

position:4644224:1
position: 4644224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4646463-4646784:1:exon

position:4646463:1
position: 4646463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4646784:1
position: 4646784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4647033-4647080:1:exon

position:4647033:1
position: 4647033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4647080:1
position: 4647080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4647902-4648054:1:exon

position:4647902:1
position: 4647902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4648054:1
position: 4648054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4648640-4648751:1:exon

position:4648640:1
position: 4648640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4648751:1
position: 4648751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4649031-4649352:1:exon

position:4649031:1
position: 4649031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gsg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Gsg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: germ cell-specific gene 1 protein
translation: MELPPGLPGQRALLPAGLGLLSLGLSATSLLSDRWFVGTQKVPKPVCGKSVAAECHELPVPLDGGGVPNASAAAVVQYSWAAGDDGFAFLTFHSGVWLSCAEIMEEPGEKCRSSIELTPPAQRAILWLSLGSQTAHLGLELISVLLLLIHLLLTRRPACGLKLSAFAAVFSVLSGLLGMVAHMMYSQVFQATANLGPEDWRPHAWTYGWAFYTAWVSFTCCMASAVTTFNIYTKMALEFQSRRDRGFQVGAGCPVPLLQQPPCAPLPEGPPTSCCHGYHHPPLRSVSESVDFFSALRDKTARGGPGEAPGVSVEEEQC
SIO_010081: Gsg1
subclass of: SO_0000673
so part of: Gsg1
location: join(4646463..4646784,4647033..4647080,4647902..4648054,4648640..4648751,4649031..4649352)
location: region:4646463-4649352:1
so has part: feature:4646463-4646784:1:exon
so has part: feature:4647033-4647080:1:exon
so has part: feature:4647902-4648054:1:exon
so has part: feature:4648640-4648751:1:exon
so has part: feature:4649031-4649352:1:exon

XP_048191008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4646463-4646784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4647033-4647080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4647902-4648054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4648640-4648751:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4649031-4649352:1:exon

Fam234b
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Fam234b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4651871..4662656)
location: region:4651871-4662656:-1
so has part: feature:4651871-4662656:-1:exon
subclass of: SO_0000010

125342871
type: Gene
SIO_000068: ncbigene

position:4651871:-1
position: 4651871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4662656:-1
position: 4662656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4651871-4662656:-1:exon

Fam234b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Fam234b
product: family with sequence similarity 234 member B
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048335195.1
SIO_010081: Fam234b
subclass of: SO_0000673
so part of: Fam234b
location: complement(join(4651871..4652104,4652804..4653024,4654002..4654119,4654694..4654849,4655452..4655533,4655969..4656112,4656598..4656739,4656929..4657076,4657348..4657478,4657576..4657773,4658619..4658720,4659436..4659828,4662584..4662656))
location: region:4651871-4662656:-1
so has part: feature:4662584-4662656:-1:exon
so has part: feature:4659436-4659828:-1:exon
so has part: feature:4658619-4658720:-1:exon
so has part: feature:4657576-4657773:-1:exon
so has part: feature:4657348-4657478:-1:exon
so has part: feature:4656929-4657076:-1:exon
so has part: feature:4656598-4656739:-1:exon
so has part: feature:4655969-4656112:-1:exon
so has part: feature:4655452-4655533:-1:exon
so has part: feature:4654694-4654849:-1:exon
so has part: feature:4654002-4654119:-1:exon
so has part: feature:4652804-4653024:-1:exon
so has part: feature:4651871-4652104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4662584-4662656:-1:exon

position:4662584:-1
position: 4662584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4659436-4659828:-1:exon

position:4659436:-1
position: 4659436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4659828:-1
position: 4659828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4658619-4658720:-1:exon

position:4658619:-1
position: 4658619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4658720:-1
position: 4658720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4657576-4657773:-1:exon

position:4657576:-1
position: 4657576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4657773:-1
position: 4657773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4657348-4657478:-1:exon

position:4657348:-1
position: 4657348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4657478:-1
position: 4657478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4656929-4657076:-1:exon

position:4656929:-1
position: 4656929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4657076:-1
position: 4657076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4656598-4656739:-1:exon

position:4656598:-1
position: 4656598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4656739:-1
position: 4656739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4655969-4656112:-1:exon

position:4655969:-1
position: 4655969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4656112:-1
position: 4656112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4655452-4655533:-1:exon

position:4655452:-1
position: 4655452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4655533:-1
position: 4655533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4654694-4654849:-1:exon

position:4654694:-1
position: 4654694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4654849:-1
position: 4654849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4654002-4654119:-1:exon

position:4654002:-1
position: 4654002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4654119:-1
position: 4654119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4652804-4653024:-1:exon

position:4652804:-1
position: 4652804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4653024:-1
position: 4653024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4651871-4652104:-1:exon

position:4652104:-1
position: 4652104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Fam234b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Fam234b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM234B
translation: MATVLSRALKLPGKKSPDLGEYDPLTQADSDESEDDLVLAAPQKNGGVKNGQGPRGEAPDSDAEGPGPAPPRVPEAGVQGFPAEPPGGLEPKAAGSLASLVRTAVFLLTLLVSMVLVLLCAFLIPCPPRDLHSAWSRRLASGAGGDLAPLDLADVNGDGLRDVLLAVVRPGNGSGGGGVPGSDPSAHLLCLSGMNGSTLWSTPLPEEAQHVACVDLQPGLDGAEALCLVTGTRRALGAYSASSGEAVWTLCPKHLANGTVAAPAVLLPDLDGDGARDLLLLAVGDAQPDLCFLLVSGRTGTPLGRAVKFNGVGVGNLIGPQVYTTASGAVYVLFGFGNIQAVALRDLFVQAQSPGPLPTSLQTGEPAWERRRASNASELIPVYSDGVEQLQVVKALDANGSDLLLTTRQGLVLLGGQSLTPRWTLHLQGLHSQPTPGYFTDDQTLDFLLQISDGMGTRQMMVVDGGSGSISWNHSAPCRMKESPTSSAVTSELKSVFLFWAEALAVPSPDSGVSPGAEAPGLHHLYLLHPAFPSILLDLANTTGIVTASAVGINDVWKDAFYVTRTAEPGPEGRPRPVVVSKLSLRWALMEGRVVPLHEAAAGVGRGELRRFLSRIKFVDSAPQV
SIO_010081: Fam234b
subclass of: SO_0000673
so part of: Fam234b
location: complement(join(4652099..4652104,4652804..4653024,4654002..4654119,4654694..4654849,4655452..4655533,4655969..4656112,4656598..4656739,4656929..4657076,4657348..4657478,4657576..4657773,4658619..4658720,4659436..4659828,4662584..4662620))
location: region:4652099-4662620:-1
so has part: feature:4662584-4662620:-1:exon
so has part: feature:4659436-4659828:-1:exon
so has part: feature:4658619-4658720:-1:exon
so has part: feature:4657576-4657773:-1:exon
so has part: feature:4657348-4657478:-1:exon
so has part: feature:4656929-4657076:-1:exon
so has part: feature:4656598-4656739:-1:exon
so has part: feature:4655969-4656112:-1:exon
so has part: feature:4655452-4655533:-1:exon
so has part: feature:4654694-4654849:-1:exon
so has part: feature:4654002-4654119:-1:exon
so has part: feature:4652804-4653024:-1:exon
so has part: feature:4652099-4652104:-1:exon

XP_048191152.1
type: Protein
SIO_000068: ncbiprotein

position:4652099:-1
position: 4652099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4662620:-1
position: 4662620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4662584-4662620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4659436-4659828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4658619-4658720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4657576-4657773:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4657348-4657478:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4656929-4657076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4656598-4656739:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4655969-4656112:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4655452-4655533:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4654694-4654849:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4654002-4654119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4652804-4653024:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4652099-4652104:-1:exon

Hebp1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Hebp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4664627..4668006
location: region:4664627-4668006:1
so has part: feature:4664627-4668006:1:exon
subclass of: SO_0000010

125342872
type: Gene
SIO_000068: ncbigene

position:4664627:1
position: 4664627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4668006:1
position: 4668006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4664627-4668006:1:exon

Hebp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hebp1
product: heme binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048335196.1
SIO_010081: Hebp1
subclass of: SO_0000673
so part of: Hebp1
location: join(4664627..4664767,4665880..4666018,4667207..4667387,4667809..4668006)
location: region:4664627-4668006:1
so has part: feature:4664627-4664767:1:exon
so has part: feature:4665880-4666018:1:exon
so has part: feature:4667207-4667387:1:exon
so has part: feature:4667809-4668006:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4664627-4664767:1:exon

position:4664767:1
position: 4664767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4665880-4666018:1:exon

position:4665880:1
position: 4665880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4666018:1
position: 4666018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4667207-4667387:1:exon

position:4667207:1
position: 4667207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4667387:1
position: 4667387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4667809-4668006:1:exon

position:4667809:1
position: 4667809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Hebp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hebp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heme-binding protein 1
translation: MLGLIRNSLFGSVETWPWQVLSTGSKEELSYEERACEGGKFATVEVTEKPLDEALKEAMPKVMKYAGGSNDRGIGMGMTVPISFAVFPNDDGSLQKRVKVWFRIPNQFQSDPPAPSDESVRIEERGGITVYSTQFGGYAKEVDYVAHAGQLRAALEGQAPCQGDLYFCAGYDPPMKPYGRRNEVWLLKT
SIO_010081: Hebp1
subclass of: SO_0000673
so part of: Hebp1
location: join(4664690..4664767,4665880..4666018,4667207..4667387,4667809..4667980)
location: region:4664690-4667980:1
so has part: feature:4664690-4664767:1:exon
so has part: feature:4665880-4666018:1:exon
so has part: feature:4667207-4667387:1:exon
so has part: feature:4667809-4667980:1:exon

XP_048191153.1
type: Protein
SIO_000068: ncbiprotein

position:4664690:1
position: 4664690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4667980:1
position: 4667980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4664690-4664767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4665880-4666018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4667207-4667387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4667809-4667980:1:exon

Gprc5d
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Gprc5d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4673506..4679444
location: region:4673506-4679444:1
so has part: feature:4673506-4679444:1:exon
subclass of: SO_0000010

125342740
type: Gene
SIO_000068: ncbigene

position:4673506:1
position: 4673506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4679444:1
position: 4679444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4673506-4679444:1:exon

Gprc5d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Gprc5d
product: G protein-coupled receptor class C group 5 member D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_048335052.1
SIO_010081: Gprc5d
subclass of: SO_0000673
so part of: Gprc5d
location: join(4673506..4674400,4677798..4677866,4679437..4679444)
location: region:4673506-4679444:1
so has part: feature:4673506-4674400:1:exon
so has part: feature:4677798-4677866:1:exon
so has part: feature:4679437-4679444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4673506-4674400:1:exon

position:4674400:1
position: 4674400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4677798-4677866:1:exon

position:4677798:1
position: 4677798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4677866:1
position: 4677866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4679437-4679444:1:exon

position:4679437:1
position: 4679437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gprc5d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Gprc5d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor family C group 5 member D
translation: MFEDCVKSAEDQYVFCEDEGPWAVVLESLAALGITATLLLLLAALFLLRRVRDCAHWNALPTLLLFLLGVLGLFGLAFAFVLPLSHGTAPARFFLFGVLFALCFSCLLAHASHLTRLARGCGPLSWPTVLGLAAGLSLPQAVLAAEYVTLVMTRGPTFARLTPHQLNVDFVALTIYVMALLALTLVVSKAAAHGPCARWRRPGWLVFAAALASAVLWAAWIGMLTCGNPRLQRQPQWDDAVICIGLVANAWAFLLIYVLPQLCLLYRAYRQDCPAPGHACPAPVYQRGLRMDNQELSRARDSEGAEEDVDLTPHGVPPSAADC
SIO_010081: Gprc5d
subclass of: SO_0000673
so part of: Gprc5d
location: join(4673506..4674400,4677798..4677866,4679437..4679444)
location: region:4673506-4679444:1
so has part: feature:4673506-4674400:1:exon
so has part: feature:4677798-4677866:1:exon
so has part: feature:4679437-4679444:1:exon

XP_048191009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4673506-4674400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4677798-4677866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4679437-4679444:1:exon

Gprc5a
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Gprc5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4681195..4685819)
location: region:4681195-4685819:-1
so has part: feature:4681195-4685819:-1:exon
subclass of: SO_0000010

125342892
type: Gene
SIO_000068: ncbigene

position:4681195:-1
position: 4681195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4685819:-1
position: 4685819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4681195-4685819:-1:exon

Gprc5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Gprc5a
product: G protein-coupled receptor class C group 5 member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048335216.1
SIO_010081: Gprc5a
subclass of: SO_0000673
so part of: Gprc5a
location: complement(join(4681195..4681332,4681443..4681501,4682069..4682998,4685784..4685819))
location: region:4681195-4685819:-1
so has part: feature:4685784-4685819:-1:exon
so has part: feature:4682069-4682998:-1:exon
so has part: feature:4681443-4681501:-1:exon
so has part: feature:4681195-4681332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4685784-4685819:-1:exon

position:4685784:-1
position: 4685784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4682069-4682998:-1:exon

position:4682069:-1
position: 4682069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4682998:-1
position: 4682998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4681443-4681501:-1:exon

position:4681443:-1
position: 4681443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4681501:-1
position: 4681501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4681195-4681332:-1:exon

position:4681332:-1
position: 4681332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gprc5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Gprc5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoic acid-induced protein 3
translation: MSAPRGCRSDLDPRYHRLCDVAGAWGVALEALAALGAAAAAGAALWLAGAAGRVQDPSRRRALPTLLLLLGAVLGVFALTFAFLVRLDGATGPARFVLFGALLGAAFACLLALAVQAARLARGRAPWPGWGLLGLALGLSLVQDALAVEYVVLAANGTRGDAIAGLPAPRRNRDFVLLLVFVMALMAAALGASLLALRGPFAGWRRHGAHAGLTALLSMALWAAWIALLLLPQPGPDWDDAVLSAALVANGWLFLAAFVLPEFRQLTKQRDPADYPGEDAPCKPQLLKPRLGLDNRAYAPDEAPPPGLDEPGPMLHAPYSTHFQLQDRGPAGDFSIPRAQAWASPYNDYQGRKEGR
SIO_010081: Gprc5a
subclass of: SO_0000673
so part of: Gprc5a
location: complement(join(4681240..4681332,4681443..4681501,4682069..4682987))
location: region:4681240-4682987:-1
so has part: feature:4682069-4682987:-1:exon
so has part: feature:4681443-4681501:-1:exon
so has part: feature:4681240-4681332:-1:exon

XP_048191173.1
type: Protein
SIO_000068: ncbiprotein

position:4681240:-1
position: 4681240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4682987:-1
position: 4682987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4682069-4682987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4681443-4681501:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4681240-4681332:-1:exon

Ddx47
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ddx47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4692375..4698710)
location: region:4692375-4698710:-1
so has part: feature:4692375-4698710:-1:exon
subclass of: SO_0000010

125342896
type: Gene
SIO_000068: ncbigene

position:4692375:-1
position: 4692375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4698710:-1
position: 4698710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4692375-4698710:-1:exon

Ddx47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ddx47
product: DEAD-box helicase 47
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048335222.1
SIO_010081: Ddx47
subclass of: SO_0000673
so part of: Ddx47
location: complement(join(4692375..4692806,4693694..4693823,4694034..4694104,4695014..4695151,4695492..4695638,4695865..4695981,4696087..4696158,4696371..4696489,4696654..4696725,4696855..4697043,4698144..4698237,4698621..4698710))
location: region:4692375-4698710:-1
so has part: feature:4698621-4698710:-1:exon
so has part: feature:4698144-4698237:-1:exon
so has part: feature:4696855-4697043:-1:exon
so has part: feature:4696654-4696725:-1:exon
so has part: feature:4696371-4696489:-1:exon
so has part: feature:4696087-4696158:-1:exon
so has part: feature:4695865-4695981:-1:exon
so has part: feature:4695492-4695638:-1:exon
so has part: feature:4695014-4695151:-1:exon
so has part: feature:4694034-4694104:-1:exon
so has part: feature:4693694-4693823:-1:exon
so has part: feature:4692375-4692806:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4698621-4698710:-1:exon

position:4698621:-1
position: 4698621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4698144-4698237:-1:exon

position:4698144:-1
position: 4698144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4698237:-1
position: 4698237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4696855-4697043:-1:exon

position:4696855:-1
position: 4696855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4697043:-1
position: 4697043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4696654-4696725:-1:exon

position:4696654:-1
position: 4696654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4696725:-1
position: 4696725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4696371-4696489:-1:exon

position:4696371:-1
position: 4696371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4696489:-1
position: 4696489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4696087-4696158:-1:exon

position:4696087:-1
position: 4696087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4696158:-1
position: 4696158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4695865-4695981:-1:exon

position:4695865:-1
position: 4695865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4695981:-1
position: 4695981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4695492-4695638:-1:exon

position:4695492:-1
position: 4695492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4695638:-1
position: 4695638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4695014-4695151:-1:exon

position:4695014:-1
position: 4695014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4695151:-1
position: 4695151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4694034-4694104:-1:exon

position:4694034:-1
position: 4694034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4694104:-1
position: 4694104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4693694-4693823:-1:exon

position:4693694:-1
position: 4693694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4693823:-1
position: 4693823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4692375-4692806:-1:exon

position:4692806:-1
position: 4692806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ddx47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ddx47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX47
translation: MAASVEHDSPAEAAGPAVEEEEGTQTFKDLGVTDVLCEACDQLGWTKPTKIQVEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPRRLFALVLTPTRELAFQIAEQFEALGSSIGVQCAVIVGGIDSMAQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRRTFLFSATMTKKVQKLQRAALKNPVRCAVSSKYHTVEKLQQFYLFIPSKFKDTYLVYVLNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQTKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPAFPTQDEEVMVLAERVTEAQRFARMELREHGEKKKRAREEAGDNDDTEAAMGVRNKVAGGKMKKRKGR
SIO_010081: Ddx47
subclass of: SO_0000673
so part of: Ddx47
location: complement(join(4692675..4692806,4693694..4693823,4694034..4694104,4695014..4695151,4695492..4695638,4695865..4695981,4696087..4696158,4696371..4696489,4696654..4696725,4696855..4697043,4698144..4698237,4698621..4698710))
location: region:4692675-4698710:-1
so has part: feature:4698621-4698710:-1:exon
so has part: feature:4698144-4698237:-1:exon
so has part: feature:4696855-4697043:-1:exon
so has part: feature:4696654-4696725:-1:exon
so has part: feature:4696371-4696489:-1:exon
so has part: feature:4696087-4696158:-1:exon
so has part: feature:4695865-4695981:-1:exon
so has part: feature:4695492-4695638:-1:exon
so has part: feature:4695014-4695151:-1:exon
so has part: feature:4694034-4694104:-1:exon
so has part: feature:4693694-4693823:-1:exon
so has part: feature:4692675-4692806:-1:exon

XP_048191179.1
type: Protein
SIO_000068: ncbiprotein

position:4692675:-1
position: 4692675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4698621-4698710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4698144-4698237:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4696855-4697043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4696654-4696725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4696371-4696489:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4696087-4696158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4695865-4695981:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4695492-4695638:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4695014-4695151:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4694034-4694104:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4693694-4693823:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4692675-4692806:-1:exon

Cdkn1b
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Cdkn1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4706815..4710909)
location: region:4706815-4710909:-1
so has part: feature:4706815-4710909:-1:exon
subclass of: SO_0000010

125342836
type: Gene
SIO_000068: ncbigene

position:4706815:-1
position: 4706815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4710909:-1
position: 4710909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4706815-4710909:-1:exon

Cdkn1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cdkn1b
product: cyclin dependent kinase inhibitor 1B
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048335143.1
SIO_010081: Cdkn1b
subclass of: SO_0000673
so part of: Cdkn1b
location: complement(join(4706815..4708086,4710025..4710152,4710477..4710909))
location: region:4706815-4710909:-1
so has part: feature:4710477-4710909:-1:exon
so has part: feature:4710025-4710152:-1:exon
so has part: feature:4706815-4708086:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4710477-4710909:-1:exon

position:4710477:-1
position: 4710477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4710025-4710152:-1:exon

position:4710025:-1
position: 4710025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4710152:-1
position: 4710152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4706815-4708086:-1:exon

position:4708086:-1
position: 4708086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cdkn1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cdkn1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase inhibitor 1B
translation: MSDVRVSGGGSPLLERADARTPGAPKPSACRNLFGPVDHEELRRDLERHRRELEEAGRRRWNFDFQNHRPLDGRFEWQAVERGGLPEFYHRPPRAPRAPRPAPAGPDDAGDPAGPDPPEPGAAARKRPAGEGSSAQNKRVNRAEENGAGGAPDAGPVEQTPRKPRLRGQQT
SIO_010081: Cdkn1b
subclass of: SO_0000673
so part of: Cdkn1b
location: complement(join(4710031..4710152,4710477..4710870))
location: region:4710031-4710870:-1
so has part: feature:4710477-4710870:-1:exon
so has part: feature:4710031-4710152:-1:exon

XP_048191100.1
type: Protein
SIO_000068: ncbiprotein

position:4710031:-1
position: 4710031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4710870:-1
position: 4710870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4710477-4710870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4710031-4710152:-1:exon

Gpr19
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Gpr19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4720206..4727621
location: region:4720206-4727621:1
so has part: feature:4720206-4727621:1:exon
subclass of: SO_0000010

125342835
type: Gene
SIO_000068: ncbigene

position:4720206:1
position: 4720206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4727621:1
position: 4727621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4720206-4727621:1:exon

Gpr19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Gpr19
product: G protein-coupled receptor 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048335141.1
SIO_010081: Gpr19
subclass of: SO_0000673
so part of: Gpr19
location: join(4720206..4720340,4726305..4727621)
location: region:4720206-4727621:1
so has part: feature:4720206-4720340:1:exon
so has part: feature:4726305-4727621:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4720206-4720340:1:exon

position:4720340:1
position: 4720340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4726305-4727621:1:exon

position:4726305:1
position: 4726305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gpr19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Gpr19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 19 isoform X1
translation: MRPPQVFRGALQTPMQAPRLTSKTPGESESRWRTDEKAASMAALTMDRSRPPLLFPTLLVPVHNHSDSEPAMPPPSPGPLGLNEDPGWPGNRTTGPRYARTPGEVAAASVFFGTLWLSSVIGNSLVCLVIHRSRRAQSTTNYFVVSLACADLLASVAGAPFVLLQFALGRWALGGAACRLVRFAQYLTPGVQSSVLLCISIDRFYTVVYPLSFKVSREKAKRMIAASWLLDAALASPVLFLFGPAGDGQCPHFPPASWQGTAFAALQVLAGFAVPSSLLVLVYRRVVRHIWRLGGDGRAVRRTMNVVPRTKVRTVQVFLLLSLLFLLSWLPFHVAQLWHPGERDARQSALVFTAVACVAFSSSASKPALYAISNANFRRGVKETFCMSATKCYRSNAYTITTSSRMAKRNYVGISEIPPLAKAGTKDSIYDAFDREAKGKKLAWPINSNPPNTFV
SIO_010081: Gpr19
subclass of: SO_0000673
so part of: Gpr19
location: join(4720243..4720340,4726305..4727574)
location: region:4720243-4727574:1
so has part: feature:4720243-4720340:1:exon
so has part: feature:4726305-4727574:1:exon

XP_048191098.1
type: Protein
SIO_000068: ncbiprotein

position:4720243:1
position: 4720243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition