Perognathus longimembris pacificus isolate PPM17 chromosome 26, ASM2315922v1, whole genome shotgun sequence.
type: Entry
definition: Perognathus longimembris pacificus isolate PPM17 chromosome 26, ASM2315922v1, whole genome shotgun sequence.
sequence version: NC_063186.1
sequence date: 2022-05-19
sequence: sequence
division: CON
label: NC_063186.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA837248
dblink: SAMN26876106
keyword: WGS
keyword: RefSeq
source: Perognathus longimembris pacificus (Pacific pocket mouse)
organism: Perognathus longimembris pacificus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Perognathinae; Perognathus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM041289.1.\nAssembly name: ASM2315922v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the San Diego Zoo Wildlife\nAlliance on 2022/04/27. The original whole-genome shotgun project\nhas the accession JALGBO000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: San Diego Zoo Wildlife Alliance\nAssembly Date :: 2021\nAssembly Method :: Peregrine v. JUNE-2020; HiRise v.\n JULY-2020; Juicer v. DECEMBER-2020;\n Juicebox Assembly Tools v. DECEMBER-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 23.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Perognathus longimembris pacificus\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 13372902
topology: linear
so has quality: SO_0000987
location: 1..13372902
location: region:1-13372902:1
RO_0002162: 214514

NC_063186
type: RefSeq
SIO_000068: refseq

PRJNA837248
type: BioProject
SIO_000068: bioproject

SAMN26876106
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13372902:1
position: 13372902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-13372902:1:source
so part of: sequence
organism: Perognathus longimembris pacificus
mol type: genomic DNA
isolate: PPM17
sub species: pacificus
chromosome: 26
sex: male
cell line: 21356
cell type: fibroblast
tissue type: trachea
dev stage: adult
country: USA: Santa Margarita
collection date: 2019
collected by: SDZWA

214514
type: Taxonomy
SIO_000068: taxonomy

LOC125342451
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342451
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6526..36416
location: region:6526-36416:1
so has part: feature:6526-36416:1:exon
subclass of: SO_0000011

125342451
type: Gene
SIO_000068: ncbigene

position:6526:1
position: 6526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36416:1
position: 36416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6526-36416:1:exon

LOC125342451
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342451
product: uncharacterized LOC125342451
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_007209225.1
SIO_010081: LOC125342451
subclass of: SO_0000673
so part of: LOC125342451
location: join(6526..6537,19095..19097,19476..19555,23037..23040,36407..36416)
location: region:6526-36416:1
so has part: feature:6526-6537:1:exon
so has part: feature:19095-19097:1:exon
so has part: feature:19476-19555:1:exon
so has part: feature:23037-23040:1:exon
so has part: feature:36407-36416:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6526-6537:1:exon

position:6537:1
position: 6537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19095-19097:1:exon

position:19095:1
position: 19095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19097:1
position: 19097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19476-19555:1:exon

position:19476:1
position: 19476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19555:1
position: 19555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:23037-23040:1:exon

position:23037:1
position: 23037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23040:1
position: 23040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:36407-36416:1:exon

position:36407:1
position: 36407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342452
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(22478..34552)
location: region:22478-34552:-1
so has part: feature:22478-34552:-1:exon
subclass of: SO_0000011

125342452
type: Gene
SIO_000068: ncbigene

position:22478:-1
position: 22478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34552:-1
position: 34552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22478-34552:-1:exon

LOC125342452
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342452
product: uncharacterized LOC125342452
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007209226.1
SIO_010081: LOC125342452
subclass of: SO_0000673
so part of: LOC125342452
location: complement(join(22478..22595,29928..29931,34543..34552))
location: region:22478-34552:-1
so has part: feature:34543-34552:-1:exon
so has part: feature:29928-29931:-1:exon
so has part: feature:22478-22595:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34543-34552:-1:exon

position:34543:-1
position: 34543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29928-29931:-1:exon

position:29928:-1
position: 29928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29931:-1
position: 29931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22478-22595:-1:exon

position:22595:-1
position: 22595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Med12l
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Med12l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(65241..265132)
location: region:65241-265132:-1
so has part: feature:65241-265132:-1:exon
subclass of: SO_0000010

125342548
type: Gene
SIO_000068: ncbigene

position:65241:-1
position: 65241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265132:-1
position: 265132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65241-265132:-1:exon

Med12l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Med12l
product: mediator complex subunit 12L, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334781.1
SIO_010081: Med12l
subclass of: SO_0000673
so part of: Med12l
location: complement(join(65241..67854,70327..70408,73337..73432,74174..74330,75702..75913,85909..86129,87641..87797,89844..90206,91919..92080,92940..93075,93238..93347,94817..94906,97770..97881,100903..101064,101792..101982,102099..102173,102700..102888,106244..106443,109700..109813,110474..110575,110886..111006,113193..113334,114188..114412,118237..118368,120959..121122,122563..122706,123253..123371,128741..128888,202354..202530,203372..203476,204641..204846,206856..206982,209699..209830,216053..216189,216479..216578,217864..218013,227624..227893,228940..229050,232154..232323,239928..240087,242332..242523,245145..245249,264802..265132))
location: region:65241-265132:-1
so has part: feature:264802-265132:-1:exon
so has part: feature:245145-245249:-1:exon
so has part: feature:242332-242523:-1:exon
so has part: feature:239928-240087:-1:exon
so has part: feature:232154-232323:-1:exon
so has part: feature:228940-229050:-1:exon
so has part: feature:227624-227893:-1:exon
so has part: feature:217864-218013:-1:exon
so has part: feature:216479-216578:-1:exon
so has part: feature:216053-216189:-1:exon
so has part: feature:209699-209830:-1:exon
so has part: feature:206856-206982:-1:exon
so has part: feature:204641-204846:-1:exon
so has part: feature:203372-203476:-1:exon
so has part: feature:202354-202530:-1:exon
so has part: feature:128741-128888:-1:exon
so has part: feature:123253-123371:-1:exon
so has part: feature:122563-122706:-1:exon
so has part: feature:120959-121122:-1:exon
so has part: feature:118237-118368:-1:exon
so has part: feature:114188-114412:-1:exon
so has part: feature:113193-113334:-1:exon
so has part: feature:110886-111006:-1:exon
so has part: feature:110474-110575:-1:exon
so has part: feature:109700-109813:-1:exon
so has part: feature:106244-106443:-1:exon
so has part: feature:102700-102888:-1:exon
so has part: feature:102099-102173:-1:exon
so has part: feature:101792-101982:-1:exon
so has part: feature:100903-101064:-1:exon
so has part: feature:97770-97881:-1:exon
so has part: feature:94817-94906:-1:exon
so has part: feature:93238-93347:-1:exon
so has part: feature:92940-93075:-1:exon
so has part: feature:91919-92080:-1:exon
so has part: feature:89844-90206:-1:exon
so has part: feature:87641-87797:-1:exon
so has part: feature:85909-86129:-1:exon
so has part: feature:75702-75913:-1:exon
so has part: feature:74174-74330:-1:exon
so has part: feature:73337-73432:-1:exon
so has part: feature:70327-70408:-1:exon
so has part: feature:65241-67854:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264802-265132:-1:exon

position:264802:-1
position: 264802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245145-245249:-1:exon

position:245145:-1
position: 245145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245249:-1
position: 245249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:242332-242523:-1:exon

position:242332:-1
position: 242332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242523:-1
position: 242523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:239928-240087:-1:exon

position:239928:-1
position: 239928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240087:-1
position: 240087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:232154-232323:-1:exon

position:232154:-1
position: 232154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232323:-1
position: 232323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:228940-229050:-1:exon

position:228940:-1
position: 228940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229050:-1
position: 229050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:227624-227893:-1:exon

position:227624:-1
position: 227624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227893:-1
position: 227893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:217864-218013:-1:exon

position:217864:-1
position: 217864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218013:-1
position: 218013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:216479-216578:-1:exon

position:216479:-1
position: 216479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216578:-1
position: 216578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:216053-216189:-1:exon

position:216053:-1
position: 216053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216189:-1
position: 216189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:209699-209830:-1:exon

position:209699:-1
position: 209699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209830:-1
position: 209830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:206856-206982:-1:exon

position:206856:-1
position: 206856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206982:-1
position: 206982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:204641-204846:-1:exon

position:204641:-1
position: 204641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204846:-1
position: 204846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:203372-203476:-1:exon

position:203372:-1
position: 203372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203476:-1
position: 203476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:202354-202530:-1:exon

position:202354:-1
position: 202354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202530:-1
position: 202530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:128741-128888:-1:exon

position:128741:-1
position: 128741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128888:-1
position: 128888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:123253-123371:-1:exon

position:123253:-1
position: 123253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123371:-1
position: 123371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:122563-122706:-1:exon

position:122563:-1
position: 122563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122706:-1
position: 122706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:120959-121122:-1:exon

position:120959:-1
position: 120959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121122:-1
position: 121122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:118237-118368:-1:exon

position:118237:-1
position: 118237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118368:-1
position: 118368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:114188-114412:-1:exon

position:114188:-1
position: 114188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114412:-1
position: 114412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:113193-113334:-1:exon

position:113193:-1
position: 113193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113334:-1
position: 113334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:110886-111006:-1:exon

position:110886:-1
position: 110886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111006:-1
position: 111006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:110474-110575:-1:exon

position:110474:-1
position: 110474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110575:-1
position: 110575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:109700-109813:-1:exon

position:109700:-1
position: 109700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109813:-1
position: 109813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:106244-106443:-1:exon

position:106244:-1
position: 106244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106443:-1
position: 106443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:102700-102888:-1:exon

position:102700:-1
position: 102700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102888:-1
position: 102888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:102099-102173:-1:exon

position:102099:-1
position: 102099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102173:-1
position: 102173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:101792-101982:-1:exon

position:101792:-1
position: 101792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101982:-1
position: 101982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:100903-101064:-1:exon

position:100903:-1
position: 100903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101064:-1
position: 101064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:97770-97881:-1:exon

position:97770:-1
position: 97770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97881:-1
position: 97881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:94817-94906:-1:exon

position:94817:-1
position: 94817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94906:-1
position: 94906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:93238-93347:-1:exon

position:93238:-1
position: 93238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93347:-1
position: 93347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:92940-93075:-1:exon

position:92940:-1
position: 92940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93075:-1
position: 93075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:91919-92080:-1:exon

position:91919:-1
position: 91919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92080:-1
position: 92080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:89844-90206:-1:exon

position:89844:-1
position: 89844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90206:-1
position: 90206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:87641-87797:-1:exon

position:87641:-1
position: 87641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87797:-1
position: 87797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:85909-86129:-1:exon

position:85909:-1
position: 85909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86129:-1
position: 86129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:75702-75913:-1:exon

position:75702:-1
position: 75702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75913:-1
position: 75913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:74174-74330:-1:exon

position:74174:-1
position: 74174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74330:-1
position: 74330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:73337-73432:-1:exon

position:73337:-1
position: 73337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73432:-1
position: 73432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:70327-70408:-1:exon

position:70327:-1
position: 70327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70408:-1
position: 70408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:65241-67854:-1:exon

position:67854:-1
position: 67854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Med12l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Med12l
product: mediator complex subunit 12L, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334782.1
SIO_010081: Med12l
subclass of: SO_0000673
so part of: Med12l
location: complement(join(65241..67854,70327..70408,73337..73432,74174..74330,75702..75913,85909..86129,87641..87797,89844..90206,91919..92080,92940..93075,93238..93347,94817..94906,97770..97881,100903..101064,101792..101982,102099..102173,102700..102888,106244..106443,109700..109813,110474..110575,110886..111006,113193..113334,114188..114415,118237..118368,120959..121122,122563..122706,123253..123371,128741..128888,202354..202530,204641..204846,206856..206982,209699..209830,216053..216189,216479..216578,217864..218013,227624..227893,228940..229050,232154..232323,239928..240087,242332..242523,245145..245249,264802..265131))
location: region:65241-265131:-1
so has part: feature:264802-265131:-1:exon
so has part: feature:245145-245249:-1:exon
so has part: feature:242332-242523:-1:exon
so has part: feature:239928-240087:-1:exon
so has part: feature:232154-232323:-1:exon
so has part: feature:228940-229050:-1:exon
so has part: feature:227624-227893:-1:exon
so has part: feature:217864-218013:-1:exon
so has part: feature:216479-216578:-1:exon
so has part: feature:216053-216189:-1:exon
so has part: feature:209699-209830:-1:exon
so has part: feature:206856-206982:-1:exon
so has part: feature:204641-204846:-1:exon
so has part: feature:202354-202530:-1:exon
so has part: feature:128741-128888:-1:exon
so has part: feature:123253-123371:-1:exon
so has part: feature:122563-122706:-1:exon
so has part: feature:120959-121122:-1:exon
so has part: feature:118237-118368:-1:exon
so has part: feature:114188-114415:-1:exon
so has part: feature:113193-113334:-1:exon
so has part: feature:110886-111006:-1:exon
so has part: feature:110474-110575:-1:exon
so has part: feature:109700-109813:-1:exon
so has part: feature:106244-106443:-1:exon
so has part: feature:102700-102888:-1:exon
so has part: feature:102099-102173:-1:exon
so has part: feature:101792-101982:-1:exon
so has part: feature:100903-101064:-1:exon
so has part: feature:97770-97881:-1:exon
so has part: feature:94817-94906:-1:exon
so has part: feature:93238-93347:-1:exon
so has part: feature:92940-93075:-1:exon
so has part: feature:91919-92080:-1:exon
so has part: feature:89844-90206:-1:exon
so has part: feature:87641-87797:-1:exon
so has part: feature:85909-86129:-1:exon
so has part: feature:75702-75913:-1:exon
so has part: feature:74174-74330:-1:exon
so has part: feature:73337-73432:-1:exon
so has part: feature:70327-70408:-1:exon
so has part: feature:65241-67854:-1:exon

position:265131:-1
position: 265131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264802-265131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245145-245249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242332-242523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239928-240087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232154-232323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228940-229050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227624-227893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217864-218013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216479-216578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216053-216189:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209699-209830:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206856-206982:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204641-204846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:202354-202530:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:128741-128888:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:123253-123371:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:122563-122706:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:120959-121122:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:118237-118368:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:114188-114415:-1:exon

position:114415:-1
position: 114415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:113193-113334:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:110886-111006:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:110474-110575:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:109700-109813:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:106244-106443:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:102700-102888:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:102099-102173:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:101792-101982:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:100903-101064:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:97770-97881:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:94817-94906:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:93238-93347:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:92940-93075:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:91919-92080:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:89844-90206:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:87641-87797:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:85909-86129:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:75702-75913:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:74174-74330:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:73337-73432:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:70327-70408:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:65241-67854:-1:exon

Med12l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Med12l
product: mediator complex subunit 12L, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334783.1
SIO_010081: Med12l
subclass of: SO_0000673
so part of: Med12l
location: complement(join(65241..67854,70327..70408,75702..75913,85909..86129,87641..87797,89844..90206,91919..92080,92940..93075,93238..93347,94817..94906,97770..97881,100903..101064,101792..101982,102099..102173,102700..102888,106244..106443,109700..109813,110474..110575,110886..111006,113193..113334,114188..114415,118237..118368,120959..121122,122563..122706,123253..123371,128741..128888,202354..202530,203372..203476,204641..204846,206856..206982,209699..209830,216053..216189,216479..216578,217864..218013,227624..227893,228940..229050,232154..232323,239928..240087,242332..242523,245145..245249,264802..265131))
location: region:65241-265131:-1
so has part: feature:264802-265131:-1:exon
so has part: feature:245145-245249:-1:exon
so has part: feature:242332-242523:-1:exon
so has part: feature:239928-240087:-1:exon
so has part: feature:232154-232323:-1:exon
so has part: feature:228940-229050:-1:exon
so has part: feature:227624-227893:-1:exon
so has part: feature:217864-218013:-1:exon
so has part: feature:216479-216578:-1:exon
so has part: feature:216053-216189:-1:exon
so has part: feature:209699-209830:-1:exon
so has part: feature:206856-206982:-1:exon
so has part: feature:204641-204846:-1:exon
so has part: feature:203372-203476:-1:exon
so has part: feature:202354-202530:-1:exon
so has part: feature:128741-128888:-1:exon
so has part: feature:123253-123371:-1:exon
so has part: feature:122563-122706:-1:exon
so has part: feature:120959-121122:-1:exon
so has part: feature:118237-118368:-1:exon
so has part: feature:114188-114415:-1:exon
so has part: feature:113193-113334:-1:exon
so has part: feature:110886-111006:-1:exon
so has part: feature:110474-110575:-1:exon
so has part: feature:109700-109813:-1:exon
so has part: feature:106244-106443:-1:exon
so has part: feature:102700-102888:-1:exon
so has part: feature:102099-102173:-1:exon
so has part: feature:101792-101982:-1:exon
so has part: feature:100903-101064:-1:exon
so has part: feature:97770-97881:-1:exon
so has part: feature:94817-94906:-1:exon
so has part: feature:93238-93347:-1:exon
so has part: feature:92940-93075:-1:exon
so has part: feature:91919-92080:-1:exon
so has part: feature:89844-90206:-1:exon
so has part: feature:87641-87797:-1:exon
so has part: feature:85909-86129:-1:exon
so has part: feature:75702-75913:-1:exon
so has part: feature:70327-70408:-1:exon
so has part: feature:65241-67854:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264802-265131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245145-245249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242332-242523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239928-240087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232154-232323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228940-229050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227624-227893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217864-218013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216479-216578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216053-216189:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209699-209830:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206856-206982:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204641-204846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:203372-203476:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:202354-202530:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:128741-128888:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:123253-123371:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:122563-122706:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:120959-121122:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:118237-118368:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:114188-114415:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:113193-113334:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:110886-111006:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:110474-110575:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:109700-109813:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:106244-106443:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:102700-102888:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:102099-102173:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:101792-101982:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:100903-101064:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:97770-97881:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:94817-94906:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:93238-93347:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:92940-93075:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:91919-92080:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:89844-90206:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:87641-87797:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:85909-86129:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:75702-75913:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:70327-70408:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:65241-67854:-1:exon

Med12l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Med12l
product: mediator complex subunit 12L, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334780.1
SIO_010081: Med12l
subclass of: SO_0000673
so part of: Med12l
location: complement(join(65241..67854,70327..70408,73337..73432,74174..74330,75702..75913,85909..86129,87641..87797,89844..90206,91919..92080,92940..93075,93238..93347,94817..94906,97770..97881,100903..101064,101792..101982,102099..102173,102700..102888,106244..106443,109700..109813,110474..110575,110886..111006,113193..113334,114188..114415,118237..118368,120959..121122,122563..122706,123253..123371,128741..128888,202354..202530,203372..203476,204641..204846,206856..206982,209699..209830,216053..216189,216479..216578,217864..218013,227624..227893,228940..229050,232154..232323,239928..240087,242332..242523,245145..245249,264802..265131))
location: region:65241-265131:-1
so has part: feature:264802-265131:-1:exon
so has part: feature:245145-245249:-1:exon
so has part: feature:242332-242523:-1:exon
so has part: feature:239928-240087:-1:exon
so has part: feature:232154-232323:-1:exon
so has part: feature:228940-229050:-1:exon
so has part: feature:227624-227893:-1:exon
so has part: feature:217864-218013:-1:exon
so has part: feature:216479-216578:-1:exon
so has part: feature:216053-216189:-1:exon
so has part: feature:209699-209830:-1:exon
so has part: feature:206856-206982:-1:exon
so has part: feature:204641-204846:-1:exon
so has part: feature:203372-203476:-1:exon
so has part: feature:202354-202530:-1:exon
so has part: feature:128741-128888:-1:exon
so has part: feature:123253-123371:-1:exon
so has part: feature:122563-122706:-1:exon
so has part: feature:120959-121122:-1:exon
so has part: feature:118237-118368:-1:exon
so has part: feature:114188-114415:-1:exon
so has part: feature:113193-113334:-1:exon
so has part: feature:110886-111006:-1:exon
so has part: feature:110474-110575:-1:exon
so has part: feature:109700-109813:-1:exon
so has part: feature:106244-106443:-1:exon
so has part: feature:102700-102888:-1:exon
so has part: feature:102099-102173:-1:exon
so has part: feature:101792-101982:-1:exon
so has part: feature:100903-101064:-1:exon
so has part: feature:97770-97881:-1:exon
so has part: feature:94817-94906:-1:exon
so has part: feature:93238-93347:-1:exon
so has part: feature:92940-93075:-1:exon
so has part: feature:91919-92080:-1:exon
so has part: feature:89844-90206:-1:exon
so has part: feature:87641-87797:-1:exon
so has part: feature:85909-86129:-1:exon
so has part: feature:75702-75913:-1:exon
so has part: feature:74174-74330:-1:exon
so has part: feature:73337-73432:-1:exon
so has part: feature:70327-70408:-1:exon
so has part: feature:65241-67854:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264802-265131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245145-245249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242332-242523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239928-240087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232154-232323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228940-229050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227624-227893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217864-218013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216479-216578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216053-216189:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209699-209830:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206856-206982:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204641-204846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:203372-203476:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:202354-202530:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:128741-128888:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:123253-123371:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:122563-122706:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:120959-121122:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:118237-118368:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:114188-114415:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:113193-113334:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:110886-111006:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:110474-110575:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:109700-109813:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:106244-106443:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:102700-102888:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:102099-102173:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:101792-101982:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:100903-101064:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:97770-97881:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:94817-94906:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:93238-93347:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:92940-93075:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:91919-92080:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:89844-90206:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:87641-87797:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:85909-86129:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:75702-75913:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:74174-74330:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:73337-73432:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:70327-70408:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:65241-67854:-1:exon

Med12l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Med12l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 12-like protein isoform X3
translation: MAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGSARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQTAIHSWFSDLAGNKPLAILAKKVPILSKKEDVFAYLAKYSVPMVRAMWLIKMTCAYYSAISEAKIKKRQLPDPNLEWTQISTRYLREQLVKISDFYHMVSSTSDGPVPVPPEVEQAMKQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPMDDDLLKLLLPLMLQYSDEFVQSAYLSRRLAYFCARRLSLLLSDSPSLLSAHSPHMMIGPNPASIGTPSPGPPGPGMIPVQLAFSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSSNENKSTNPGSPLDLLQVAPSSLPMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLDRHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMAVAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPSLSDPNSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTGPRSPAGDNMDEHYLKDHDGKMEIFSPMPGESCESANPSLGRRMSVNGEKLVKREKSRDLIFPSNYDLLRHLQYATHFPIPLDESSSHECNQRTILLYGVGKEREEARHQLKKITKDILKILNKKSTTEMSVGDEGQKARKNKQEAFPTLETVFTKLQLLSYFDQHQVTSQISNNVLEQITSFASGASFHLPLAHHVQLIFDLMEPALNINGLIDFAIQLLNELSVVEAELLLKSSSLAGNYTTGLCVCIVAVLRRYHSCLILNPDQTAQVFEGLCGVVKHVVNPSECSSPERCILAYLYDLYVSCSHLRSKFGDLFSSACSKVKQTIYNNVMPANSNLRWDPDFMLDFIENPSARSINYSVLGKILNDNAANRYSFVCNTLMNVCMGHQDPCRINDIANFSSELTACCTVLSSEWLGVLKALCCSSNHVWGFNDVLCTVDVSDLSFHDSLATFIAILIARQCFSLEDVVQHVALPSLLAAACGDADAEPGARMTCRLLLHLFRAPQACFLPQATGKPFPGIRSSCDRHLLAAAHNSIEVGAVFAVLKAIMMLGDAKIGSNNVSSLKNDEFTVRGLRRDGNAEDIWTASQNSKSCGKGISIETANLREYARYVLRTICQQEWVGEHCLKEPERLCTDKELILDPVLSNVQAQKLLQLICYPHGIKECAEGDNLQRQHIKRILQNLEQWTLRQSWLELQLMIKQCLKDPGSGSVAEMNNLLDNIAKATIEVFQQSADLNSNSSNSGMSLFHPHGIGNTDASSTRQNGIKTFLSSSERRGVWLVAPLIARLPTSVQGRVLKAAGEELEKGQHLGSSSKKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLQNQVNQILSNWREERYQDDIKARQMMHEALQLRLNLVGGMFDTVQRSAQWTTDWALLLLQIITSGTVDMHTNNELFTTVLDMLGVLINGTLASDLSNTSPGGAEENKRAYMNLVKKLKKELGDKRSESIDKVQQLLPLPKQTCDVITCEPMGSLIDTKGNKIAGFDSIDKKQGLQVSTKQKVSPWDLFEGQKNPAPLSWAWFGTVRVDRRVIRYEEQHHLLLYHTHPMPKPRSYYLEPLPLPPEEEEEEPTSPISQEPERKSAELSDQGKNAADEEKKTKGRKRKTKSSSRVDEYPQNNMYRVPPNYSPISSQVMHHAQSTVWGYNLVGQPPQPGFFLQNQSLTPGGSRLDPAGSFVPASTKQALSHMLQRRSGASTQPPTLHTLTSQQQFIQMKLLQQQQQQQQHRLLRQAQTRPFQQTMPQGYTMYGTQMPLQQPAGGAVLSPGYSSRAYPAAHASPVLADRLRQAQPSGYVQQQAPQYLQTVTGAQRLNHQALQQSPLVVGGMDAVLTSA…
SIO_010081: Med12l
subclass of: SO_0000673
so part of: Med12l
location: complement(join(67802..67854,70327..70408,73337..73432,74174..74330,75702..75913,85909..86129,87641..87797,89844..90206,91919..92080,92940..93075,93238..93347,94817..94906,97770..97881,100903..101064,101792..101982,102099..102173,102700..102888,106244..106443,109700..109813,110474..110575,110886..111006,113193..113334,114188..114415,118237..118368,120959..121122,122563..122706,123253..123371,128741..128888,202354..202530,204641..204846,206856..206982,209699..209830,216053..216189,216479..216578,217864..218013,227624..227893,228940..229050,232154..232323,239928..240087,242332..242523,245145..245249,264802..264900))
location: region:67802-264900:-1
so has part: feature:264802-264900:-1:exon
so has part: feature:245145-245249:-1:exon
so has part: feature:242332-242523:-1:exon
so has part: feature:239928-240087:-1:exon
so has part: feature:232154-232323:-1:exon
so has part: feature:228940-229050:-1:exon
so has part: feature:227624-227893:-1:exon
so has part: feature:217864-218013:-1:exon
so has part: feature:216479-216578:-1:exon
so has part: feature:216053-216189:-1:exon
so has part: feature:209699-209830:-1:exon
so has part: feature:206856-206982:-1:exon
so has part: feature:204641-204846:-1:exon
so has part: feature:202354-202530:-1:exon
so has part: feature:128741-128888:-1:exon
so has part: feature:123253-123371:-1:exon
so has part: feature:122563-122706:-1:exon
so has part: feature:120959-121122:-1:exon
so has part: feature:118237-118368:-1:exon
so has part: feature:114188-114415:-1:exon
so has part: feature:113193-113334:-1:exon
so has part: feature:110886-111006:-1:exon
so has part: feature:110474-110575:-1:exon
so has part: feature:109700-109813:-1:exon
so has part: feature:106244-106443:-1:exon
so has part: feature:102700-102888:-1:exon
so has part: feature:102099-102173:-1:exon
so has part: feature:101792-101982:-1:exon
so has part: feature:100903-101064:-1:exon
so has part: feature:97770-97881:-1:exon
so has part: feature:94817-94906:-1:exon
so has part: feature:93238-93347:-1:exon
so has part: feature:92940-93075:-1:exon
so has part: feature:91919-92080:-1:exon
so has part: feature:89844-90206:-1:exon
so has part: feature:87641-87797:-1:exon
so has part: feature:85909-86129:-1:exon
so has part: feature:75702-75913:-1:exon
so has part: feature:74174-74330:-1:exon
so has part: feature:73337-73432:-1:exon
so has part: feature:70327-70408:-1:exon
so has part: feature:67802-67854:-1:exon

XP_048190739.1
type: Protein
SIO_000068: ncbiprotein

position:67802:-1
position: 67802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264900:-1
position: 264900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264802-264900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245145-245249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242332-242523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239928-240087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232154-232323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228940-229050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227624-227893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217864-218013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216479-216578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216053-216189:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209699-209830:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206856-206982:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204641-204846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:202354-202530:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:128741-128888:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:123253-123371:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:122563-122706:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:120959-121122:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:118237-118368:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:114188-114415:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:113193-113334:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:110886-111006:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:110474-110575:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:109700-109813:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:106244-106443:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:102700-102888:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:102099-102173:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:101792-101982:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:100903-101064:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:97770-97881:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:94817-94906:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:93238-93347:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:92940-93075:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:91919-92080:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:89844-90206:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:87641-87797:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:85909-86129:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:75702-75913:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:74174-74330:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:73337-73432:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:70327-70408:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:67802-67854:-1:exon

Med12l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Med12l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 12-like protein isoform X2
translation: MAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGSARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQTAIHSWFSDLAGNKPLAILAKKVPILSKKEDVFAYLAKYSVPMVRAMWLIKMTCAYYSAISEAKIKKRQLPDPNLEWTQISTRYLREQLVKISDFYHMVSSTSDGPVPVPPEVEQAMKQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPMDDDLLKLLLPLMLQYSDEFVQSAYLSRRLAYFCARRLSLLLSDSPSLLSAHSPHMMIGPNPASIGTPSPGPPGPGMIPVQLAFSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSSNENKSTNPGSPLDLLQVAPSSLPMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLDRHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMAVAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPSLSDPNSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTGPRSPAGDNMDEHYLKDHDGKMEEQSIMAHMGLDSGTTNIFDEVDKSDFKTDFGSEFPIFSPMPGESCESANPSLGRRMSVNGEKLVKREKSRDLIFPSNYDLLRHLQYATHFPIPLDESSSHECNQRTILLYGVGKEREEARHQLKKITKDILKILNKKSTTEMSVGDEGQKARKNKQEAFPTLETVFTKLQLLSYFDQHQVTSQISNNVLEQITSFASGASFHLPLAHHVQLIFDLMEPALNINGLIDFAIQLLNELSVVEAELLLKSSSLAGNYTTGLCVCIVAVLRRYHSCLILNPDQTAQVFEGLCGVVKHVVNPSECSSPERCILAYLYDLYVSCSHLRSKFGDLFSACSKVKQTIYNNVMPANSNLRWDPDFMLDFIENPSARSINYSVLGKILNDNAANRYSFVCNTLMNVCMGHQDPCRINDIANFSSELTACCTVLSSEWLGVLKALCCSSNHVWGFNDVLCTVDVSDLSFHDSLATFIAILIARQCFSLEDVVQHVALPSLLAAACGDADAEPGARMTCRLLLHLFRAPQACFLPQATGKPFPGIRSSCDRHLLAAAHNSIEVGAVFAVLKAIMMLGDAKIGSNNVSSLKNDEFTVRGLRRDGNAEDIWTASQNSKSCGKGISIETANLREYARYVLRTICQQEWVGEHCLKEPERLCTDKELILDPVLSNVQAQKLLQLICYPHGIKECAEGDNLQRQHIKRILQNLEQWTLRQSWLELQLMIKQCLKDPGSGSVAEMNNLLDNIAKATIEVFQQSADLNSNSSNSGMSLFHPHGIGNTDASSTRQNGIKTFLSSSERRGVWLVAPLIARLPTSVQGRVLKAAGEELEKGQHLGSSSKKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLQNQVNQILSNWREERYQDDIKARQMMHEALQLRLNLVGGMFDTVQRSAQWTTDWALLLLQIITSGTVDMHTNNELFTTVLDMLGVLINGTLASDLSNTSPGGAEENKRAYMNLVKKLKKELGDKRSESIDKVQQLLPLPKQTCDVITCEPMGSLIDTKGNKIAGFDSIDKKQGLQVSTKQKVSPWDLFEGQKNPAPLSWAWFGTVRVDRRVIRYEEQHHLLLYHTHPMPKPRSYYLEPLPLPPEEEEEEPTSPISQEPERKSAELSDQGKNAADEEKKTKGRKRKTKSSSRVDEYPQNNMYRVPPNYSPISSQVMHHAQSTVWGYNLVGQPPQPGFFLQNQSLTPGGSRLDPAGSFVPASTKQALSHMLQRRSGASTQPPTLHTLTSQQQFIQMKLLQQQQQQQQHRLLRQAQTRPFQQTMPQGYTMYGTQMPLQQPAGGAVLSPGYSSRAYPAAHASPVLADRLRQAQPSGYVQQQAP…
SIO_010081: Med12l
subclass of: SO_0000673
so part of: Med12l
location: complement(join(67802..67854,70327..70408,73337..73432,74174..74330,75702..75913,85909..86129,87641..87797,89844..90206,91919..92080,92940..93075,93238..93347,94817..94906,97770..97881,100903..101064,101792..101982,102099..102173,102700..102888,106244..106443,109700..109813,110474..110575,110886..111006,113193..113334,114188..114412,118237..118368,120959..121122,122563..122706,123253..123371,128741..128888,202354..202530,203372..203476,204641..204846,206856..206982,209699..209830,216053..216189,216479..216578,217864..218013,227624..227893,228940..229050,232154..232323,239928..240087,242332..242523,245145..245249,264802..264900))
location: region:67802-264900:-1
so has part: feature:264802-264900:-1:exon
so has part: feature:245145-245249:-1:exon
so has part: feature:242332-242523:-1:exon
so has part: feature:239928-240087:-1:exon
so has part: feature:232154-232323:-1:exon
so has part: feature:228940-229050:-1:exon
so has part: feature:227624-227893:-1:exon
so has part: feature:217864-218013:-1:exon
so has part: feature:216479-216578:-1:exon
so has part: feature:216053-216189:-1:exon
so has part: feature:209699-209830:-1:exon
so has part: feature:206856-206982:-1:exon
so has part: feature:204641-204846:-1:exon
so has part: feature:203372-203476:-1:exon
so has part: feature:202354-202530:-1:exon
so has part: feature:128741-128888:-1:exon
so has part: feature:123253-123371:-1:exon
so has part: feature:122563-122706:-1:exon
so has part: feature:120959-121122:-1:exon
so has part: feature:118237-118368:-1:exon
so has part: feature:114188-114412:-1:exon
so has part: feature:113193-113334:-1:exon
so has part: feature:110886-111006:-1:exon
so has part: feature:110474-110575:-1:exon
so has part: feature:109700-109813:-1:exon
so has part: feature:106244-106443:-1:exon
so has part: feature:102700-102888:-1:exon
so has part: feature:102099-102173:-1:exon
so has part: feature:101792-101982:-1:exon
so has part: feature:100903-101064:-1:exon
so has part: feature:97770-97881:-1:exon
so has part: feature:94817-94906:-1:exon
so has part: feature:93238-93347:-1:exon
so has part: feature:92940-93075:-1:exon
so has part: feature:91919-92080:-1:exon
so has part: feature:89844-90206:-1:exon
so has part: feature:87641-87797:-1:exon
so has part: feature:85909-86129:-1:exon
so has part: feature:75702-75913:-1:exon
so has part: feature:74174-74330:-1:exon
so has part: feature:73337-73432:-1:exon
so has part: feature:70327-70408:-1:exon
so has part: feature:67802-67854:-1:exon

XP_048190738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264802-264900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245145-245249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242332-242523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239928-240087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232154-232323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228940-229050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227624-227893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217864-218013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216479-216578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216053-216189:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209699-209830:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206856-206982:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204641-204846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:203372-203476:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:202354-202530:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:128741-128888:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:123253-123371:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:122563-122706:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:120959-121122:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:118237-118368:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:114188-114412:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:113193-113334:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:110886-111006:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:110474-110575:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:109700-109813:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:106244-106443:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:102700-102888:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:102099-102173:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:101792-101982:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:100903-101064:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:97770-97881:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:94817-94906:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:93238-93347:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:92940-93075:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:91919-92080:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:89844-90206:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:87641-87797:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:85909-86129:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:75702-75913:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:74174-74330:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:73337-73432:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:70327-70408:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:67802-67854:-1:exon

Med12l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Med12l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 12-like protein isoform X1
translation: MAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGSARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQTAIHSWFSDLAGNKPLAILAKKVPILSKKEDVFAYLAKYSVPMVRAMWLIKMTCAYYSAISEAKIKKRQLPDPNLEWTQISTRYLREQLVKISDFYHMVSSTSDGPVPVPPEVEQAMKQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPMDDDLLKLLLPLMLQYSDEFVQSAYLSRRLAYFCARRLSLLLSDSPSLLSAHSPHMMIGPNPASIGTPSPGPPGPGMIPVQLAFSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSSNENKSTNPGSPLDLLQVAPSSLPMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLDRHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMAVAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPSLSDPNSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTGPRSPAGDNMDEHYLKDHDGKMEEQSIMAHMGLDSGTTNIFDEVDKSDFKTDFGSEFPIFSPMPGESCESANPSLGRRMSVNGEKLVKREKSRDLIFPSNYDLLRHLQYATHFPIPLDESSSHECNQRTILLYGVGKEREEARHQLKKITKDILKILNKKSTTEMSVGDEGQKARKNKQEAFPTLETVFTKLQLLSYFDQHQVTSQISNNVLEQITSFASGASFHLPLAHHVQLIFDLMEPALNINGLIDFAIQLLNELSVVEAELLLKSSSLAGNYTTGLCVCIVAVLRRYHSCLILNPDQTAQVFEGLCGVVKHVVNPSECSSPERCILAYLYDLYVSCSHLRSKFGDLFSSACSKVKQTIYNNVMPANSNLRWDPDFMLDFIENPSARSINYSVLGKILNDNAANRYSFVCNTLMNVCMGHQDPCRINDIANFSSELTACCTVLSSEWLGVLKALCCSSNHVWGFNDVLCTVDVSDLSFHDSLATFIAILIARQCFSLEDVVQHVALPSLLAAACGDADAEPGARMTCRLLLHLFRAPQACFLPQATGKPFPGIRSSCDRHLLAAAHNSIEVGAVFAVLKAIMMLGDAKIGSNNVSSLKNDEFTVRGLRRDGNAEDIWTASQNSKSCGKGISIETANLREYARYVLRTICQQEWVGEHCLKEPERLCTDKELILDPVLSNVQAQKLLQLICYPHGIKECAEGDNLQRQHIKRILQNLEQWTLRQSWLELQLMIKQCLKDPGSGSVAEMNNLLDNIAKATIEVFQQSADLNSNSSNSGMSLFHPHGIGNTDASSTRQNGIKTFLSSSERRGVWLVAPLIARLPTSVQGRVLKAAGEELEKGQHLGSSSKKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLQNQVNQILSNWREERYQDDIKARQMMHEALQLRLNLVGGMFDTVQRSAQWTTDWALLLLQIITSGTVDMHTNNELFTTVLDMLGVLINGTLASDLSNTSPGGAEENKRAYMNLVKKLKKELGDKRSESIDKVQQLLPLPKQTCDVITCEPMGSLIDTKGNKIAGFDSIDKKQGLQVSTKQKVSPWDLFEGQKNPAPLSWAWFGTVRVDRRVIRYEEQHHLLLYHTHPMPKPRSYYLEPLPLPPEEEEEEPTSPISQEPERKSAELSDQGKNAADEEKKTKGRKRKTKSSSRVDEYPQNNMYRVPPNYSPISSQVMHHAQSTVWGYNLVGQPPQPGFFLQNQSLTPGGSRLDPAGSFVPASTKQALSHMLQRRSGASTQPPTLHTLTSQQQFIQMKLLQQQQQQQQHRLLRQAQTRPFQQTMPQGYTMYGTQMPLQQPAGGAVLSPGYSSRAYPAAHASPVLADRLRQAQPSGYVQQQA…
SIO_010081: Med12l
subclass of: SO_0000673
so part of: Med12l
location: complement(join(67802..67854,70327..70408,73337..73432,74174..74330,75702..75913,85909..86129,87641..87797,89844..90206,91919..92080,92940..93075,93238..93347,94817..94906,97770..97881,100903..101064,101792..101982,102099..102173,102700..102888,106244..106443,109700..109813,110474..110575,110886..111006,113193..113334,114188..114415,118237..118368,120959..121122,122563..122706,123253..123371,128741..128888,202354..202530,203372..203476,204641..204846,206856..206982,209699..209830,216053..216189,216479..216578,217864..218013,227624..227893,228940..229050,232154..232323,239928..240087,242332..242523,245145..245249,264802..264900))
location: region:67802-264900:-1
so has part: feature:264802-264900:-1:exon
so has part: feature:245145-245249:-1:exon
so has part: feature:242332-242523:-1:exon
so has part: feature:239928-240087:-1:exon
so has part: feature:232154-232323:-1:exon
so has part: feature:228940-229050:-1:exon
so has part: feature:227624-227893:-1:exon
so has part: feature:217864-218013:-1:exon
so has part: feature:216479-216578:-1:exon
so has part: feature:216053-216189:-1:exon
so has part: feature:209699-209830:-1:exon
so has part: feature:206856-206982:-1:exon
so has part: feature:204641-204846:-1:exon
so has part: feature:203372-203476:-1:exon
so has part: feature:202354-202530:-1:exon
so has part: feature:128741-128888:-1:exon
so has part: feature:123253-123371:-1:exon
so has part: feature:122563-122706:-1:exon
so has part: feature:120959-121122:-1:exon
so has part: feature:118237-118368:-1:exon
so has part: feature:114188-114415:-1:exon
so has part: feature:113193-113334:-1:exon
so has part: feature:110886-111006:-1:exon
so has part: feature:110474-110575:-1:exon
so has part: feature:109700-109813:-1:exon
so has part: feature:106244-106443:-1:exon
so has part: feature:102700-102888:-1:exon
so has part: feature:102099-102173:-1:exon
so has part: feature:101792-101982:-1:exon
so has part: feature:100903-101064:-1:exon
so has part: feature:97770-97881:-1:exon
so has part: feature:94817-94906:-1:exon
so has part: feature:93238-93347:-1:exon
so has part: feature:92940-93075:-1:exon
so has part: feature:91919-92080:-1:exon
so has part: feature:89844-90206:-1:exon
so has part: feature:87641-87797:-1:exon
so has part: feature:85909-86129:-1:exon
so has part: feature:75702-75913:-1:exon
so has part: feature:74174-74330:-1:exon
so has part: feature:73337-73432:-1:exon
so has part: feature:70327-70408:-1:exon
so has part: feature:67802-67854:-1:exon

XP_048190737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264802-264900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245145-245249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242332-242523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239928-240087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232154-232323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228940-229050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227624-227893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217864-218013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216479-216578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216053-216189:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209699-209830:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206856-206982:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204641-204846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:203372-203476:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:202354-202530:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:128741-128888:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:123253-123371:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:122563-122706:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:120959-121122:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:118237-118368:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:114188-114415:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:113193-113334:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:110886-111006:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:110474-110575:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:109700-109813:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:106244-106443:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:102700-102888:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:102099-102173:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:101792-101982:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:100903-101064:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:97770-97881:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:94817-94906:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:93238-93347:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:92940-93075:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:91919-92080:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:89844-90206:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:87641-87797:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:85909-86129:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:75702-75913:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:74174-74330:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:73337-73432:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:70327-70408:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:67802-67854:-1:exon

Med12l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Med12l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 12-like protein isoform X4
translation: MAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGSARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQTAIHSWFSDLAGNKPLAILAKKVPILSKKEDVFAYLAKYSVPMVRAMWLIKMTCAYYSAISEAKIKKRQLPDPNLEWTQISTRYLREQLVKISDFYHMVSSTSDGPVPVPPEVEQAMKQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPMDDDLLKLLLPLMLQYSDEFVQSAYLSRRLAYFCARRLSLLLSDSPSLLSAHSPHMMIGPNPASIGTPSPGPPGPGMIPVQLAFSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSSNENKSTNPGSPLDLLQVAPSSLPMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLDRHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMAVAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPSLSDPNSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTGPRSPAGDNMDEHYLKDHDGKMEEQSIMAHMGLDSGTTNIFDEVDKSDFKTDFGSEFPIFSPMPGESCESANPSLGRRMSVNGEKLVKREKSRDLIFPSNYDLLRHLQYATHFPIPLDESSSHECNQRTILLYGVGKEREEARHQLKKITKDILKILNKKSTTEMSVGDEGQKARKNKQEAFPTLETVFTKLQLLSYFDQHQVTSQISNNVLEQITSFASGASFHLPLAHHVQLIFDLMEPALNINGLIDFAIQLLNELSVVEAELLLKSSSLAGNYTTGLCVCIVAVLRRYHSCLILNPDQTAQVFEGLCGVVKHVVNPSECSSPERCILAYLYDLYVSCSHLRSKFGDLFSSACSKVKQTIYNNVMPANSNLRWDPDFMLDFIENPSARSINYSVLGKILNDNAANRYSFVCNTLMNVCMGHQDPCRINDIANFSSELTACCTVLSSEWLGVLKALCCSSNHVWGFNDVLCTVDVSDLSFHDSLATFIAILIARQCFSLEDVVQHVALPSLLAAACGDADAEPGARMTCRLLLHLFRAPQACFLPQATGKPFPGIRSSCDRHLLAAAHNSIEVGAVFAVLKAIMMLGDAKIGSNNVSSLKNDEFTVRGLRRDGNAEDIWTASQNSKSCGKGISIETANLREYARYVLRTICQQEWVGEHCLKEPERLCTDKELILDPVLSNVQAQKLLQLICYPHGIKECAEGDNLQRQHIKRILQNLEQWTLRQSWLELQLMIKQCLKDPGSGSVAEMNNLLDNIAKATIEVFQQSADLNSNSSNSGMSLFHPHGIGNTDASSTRQNGIKTFLSSSERRGVWLVAPLIARLPTSVQGRVLKAAGEELEKGQHLGSSSKKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLQNQVNQILSNWREERYQDDIKARQMMHEALQLRLNLVGGMFDTVQRSAQWTTDWALLLLQIITSGTVDMHTNNELFTTVLDMLGVLINGTLASDLSNTSPGGAEENKRAYMNLVKKLKKELGDKRSESIDKVQQLLPLPKQTCDVITCEPMGSLIDTKGNKIAGFDSIDKKQGLQVSTKQKVSPWDLFEGQKNPAPLSWAWFGTVRVDRRVIRYEEQHHLLLYHTHPMPKPRSYYLEPLPLPPEEEEEEPTSPISQEPERKSAELSDQGKNAADEEKKTKGRKRKTKSSSRVDEYPQNNMYRVPPNYSPISSQVMHHAQSTVWGYNLVGQPPQPGFFLQNQSLTPGGSRLDPAGSFVPASTKQALSHMLQRRSGASTQPPTLHTLTSQQQFIQMKLLQQQQQQQQHRLLRQAQTRPFQQTMPQGYTMYGTQMPLQQPAGGAVLSPGYSSRAYPAAHASPVLADRLRQAQPSGYVQQQA…
SIO_010081: Med12l
subclass of: SO_0000673
so part of: Med12l
location: complement(join(67831..67854,70327..70408,75702..75913,85909..86129,87641..87797,89844..90206,91919..92080,92940..93075,93238..93347,94817..94906,97770..97881,100903..101064,101792..101982,102099..102173,102700..102888,106244..106443,109700..109813,110474..110575,110886..111006,113193..113334,114188..114415,118237..118368,120959..121122,122563..122706,123253..123371,128741..128888,202354..202530,203372..203476,204641..204846,206856..206982,209699..209830,216053..216189,216479..216578,217864..218013,227624..227893,228940..229050,232154..232323,239928..240087,242332..242523,245145..245249,264802..264900))
location: region:67831-264900:-1
so has part: feature:264802-264900:-1:exon
so has part: feature:245145-245249:-1:exon
so has part: feature:242332-242523:-1:exon
so has part: feature:239928-240087:-1:exon
so has part: feature:232154-232323:-1:exon
so has part: feature:228940-229050:-1:exon
so has part: feature:227624-227893:-1:exon
so has part: feature:217864-218013:-1:exon
so has part: feature:216479-216578:-1:exon
so has part: feature:216053-216189:-1:exon
so has part: feature:209699-209830:-1:exon
so has part: feature:206856-206982:-1:exon
so has part: feature:204641-204846:-1:exon
so has part: feature:203372-203476:-1:exon
so has part: feature:202354-202530:-1:exon
so has part: feature:128741-128888:-1:exon
so has part: feature:123253-123371:-1:exon
so has part: feature:122563-122706:-1:exon
so has part: feature:120959-121122:-1:exon
so has part: feature:118237-118368:-1:exon
so has part: feature:114188-114415:-1:exon
so has part: feature:113193-113334:-1:exon
so has part: feature:110886-111006:-1:exon
so has part: feature:110474-110575:-1:exon
so has part: feature:109700-109813:-1:exon
so has part: feature:106244-106443:-1:exon
so has part: feature:102700-102888:-1:exon
so has part: feature:102099-102173:-1:exon
so has part: feature:101792-101982:-1:exon
so has part: feature:100903-101064:-1:exon
so has part: feature:97770-97881:-1:exon
so has part: feature:94817-94906:-1:exon
so has part: feature:93238-93347:-1:exon
so has part: feature:92940-93075:-1:exon
so has part: feature:91919-92080:-1:exon
so has part: feature:89844-90206:-1:exon
so has part: feature:87641-87797:-1:exon
so has part: feature:85909-86129:-1:exon
so has part: feature:75702-75913:-1:exon
so has part: feature:70327-70408:-1:exon
so has part: feature:67831-67854:-1:exon

XP_048190740.1
type: Protein
SIO_000068: ncbiprotein

position:67831:-1
position: 67831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264802-264900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245145-245249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242332-242523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239928-240087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232154-232323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228940-229050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227624-227893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217864-218013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216479-216578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216053-216189:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209699-209830:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206856-206982:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204641-204846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:203372-203476:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:202354-202530:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:128741-128888:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:123253-123371:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:122563-122706:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:120959-121122:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:118237-118368:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:114188-114415:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:113193-113334:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:110886-111006:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:110474-110575:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:109700-109813:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:106244-106443:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:102700-102888:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:102099-102173:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:101792-101982:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:100903-101064:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:97770-97881:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:94817-94906:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:93238-93347:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:92940-93075:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:91919-92080:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:89844-90206:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:87641-87797:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:85909-86129:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:75702-75913:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:70327-70408:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:67831-67854:-1:exon

LOC125342549
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 92410..136906
location: region:92410-136906:1
so has part: feature:92410-136906:1:exon
subclass of: SO_0000010

125342549
type: Gene
SIO_000068: ncbigene

position:92410:1
position: 92410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136906:1
position: 136906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92410-136906:1:exon

LOC125342549
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342549
product: P2Y purinoceptor 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048334785.1
SIO_010081: LOC125342549
subclass of: SO_0000673
so part of: LOC125342549
location: join(92410..92481,124406..124408,133324..133475,135186..136906)
location: region:92410-136906:1
so has part: feature:92410-92481:1:exon
so has part: feature:124406-124408:1:exon
so has part: feature:133324-133475:1:exon
so has part: feature:135186-136906:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92410-92481:1:exon

position:92481:1
position: 92481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124406-124408:1:exon

position:124406:1
position: 124406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124408:1
position: 124408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:133324-133475:1:exon

position:133324:1
position: 133324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133475:1
position: 133475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:135186-136906:1:exon

position:135186:1
position: 135186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342549
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342549
product: P2Y purinoceptor 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334784.1
SIO_010081: LOC125342549
subclass of: SO_0000673
so part of: LOC125342549
location: 134898..136906
location: region:134898-136906:1
so has part: feature:134898-136906:1:exon

position:134898:1
position: 134898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134898-136906:1:exon

LOC125342549
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 12 isoform X1
translation: MTSIFTEDCGDTSKGHDYKQLPCFPPLGCKEKMQATANITTASVAPAAGNSSQCNRDYKITEVLFPLLYTVLFFVGLITNSLAMRIFFQINSKSNFIIFLKNTVISDLLMILTFPFKILSDTKLGPRPLRTFVCQVTSVVFYFTMYISISFLGLITIDRYQKTTRPFNTSSPSNLLGAKILSVVIWAFMFLLSLPNMILTNRRPQDINVKKCSFFKSEFGLVWHEIVNYICQVIFWINFLIVIVCYTLITKELYRSYVRTRGTGKVPRKRVNVKVFIIIAVFFICFVPFHFARIPYTLSQTRDVFDCASENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLTGMLKCPKSKTSLSRKNRKKEQGSGDPEETPM
SIO_010081: LOC125342549
subclass of: SO_0000673
so part of: LOC125342549
location: 135104..136240
location: region:135104-136240:1
so has part: feature:135104-136240:1:exon

XP_048190741.1
type: Protein
SIO_000068: ncbiprotein

position:135104:1
position: 135104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136240:1
position: 136240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135104-136240:1:exon

LOC125342549
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 12 isoform X2
translation: MQATANITTASVAPAAGNSSQCNRDYKITEVLFPLLYTVLFFVGLITNSLAMRIFFQINSKSNFIIFLKNTVISDLLMILTFPFKILSDTKLGPRPLRTFVCQVTSVVFYFTMYISISFLGLITIDRYQKTTRPFNTSSPSNLLGAKILSVVIWAFMFLLSLPNMILTNRRPQDINVKKCSFFKSEFGLVWHEIVNYICQVIFWINFLIVIVCYTLITKELYRSYVRTRGTGKVPRKRVNVKVFIIIAVFFICFVPFHFARIPYTLSQTRDVFDCASENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLTGMLKCPKSKTSLSRKNRKKEQGSGDPEETPM
SIO_010081: LOC125342549
subclass of: SO_0000673
so part of: LOC125342549
location: 135200..136240
location: region:135200-136240:1
so has part: feature:135200-136240:1:exon

XP_048190742.1
type: Protein
SIO_000068: ncbiprotein

position:135200:1
position: 135200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135200-136240:1:exon

LOC125342553
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342553
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 140942..143888
location: region:140942-143888:1
so has part: feature:140942-143888:1:exon
subclass of: SO_0000010

125342553
type: Gene
SIO_000068: ncbigene

position:140942:1
position: 140942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143888:1
position: 143888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140942-143888:1:exon

LOC125342553
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342553
product: P2Y purinoceptor 13-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048334790.1
SIO_010081: LOC125342553
subclass of: SO_0000673
so part of: LOC125342553
location: join(140942..141274,141817..143888)
location: region:140942-143888:1
so has part: feature:140942-141274:1:exon
so has part: feature:141817-143888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140942-141274:1:exon

position:141274:1
position: 141274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141817-143888:1:exon

position:141817:1
position: 141817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342553
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342553
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 13-like
translation: MMQSFNGSGSERCPRDTRVTRLIFPALYTVVFLTSIMLNTLALWVFLHIPSKSTFIVYLKNTMVVDLIMTIMLPFKILSDSYLGPWQLRAFVCRFSSVIFYETMYVGIILLGLIAFDRFLKIIKPFGKYFVKKPIFAKMTSVLIWFILFLISLPNMILNNREATPSSVQKCVALKGPLGLKWHRVVNYICQFIFWTVFVLMFLFYAVIAKKVYDSYKKFKSKDNKSSKKLEGKVFVVVAVFFVCFAPFHFTRVPYTHSQTHNKTDCRLENQLFIAKETTLFLAATNVCMDPLIYIFLCKKFTKRLLPYVRGRRETASSQEHHSSQTNNITMG
SIO_010081: LOC125342553
subclass of: SO_0000673
so part of: LOC125342553
location: 141839..142837
location: region:141839-142837:1
so has part: feature:141839-142837:1:exon

XP_048190747.1
type: Protein
SIO_000068: ncbiprotein

position:141839:1
position: 141839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142837:1
position: 142837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141839-142837:1:exon

Gpr87
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Gpr87
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 150915..169480
location: region:150915-169480:1
so has part: feature:150915-169480:1:exon
subclass of: SO_0000010

125342552
type: Gene
SIO_000068: ncbigene

position:150915:1
position: 150915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169480:1
position: 169480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150915-169480:1:exon

Gpr87
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Gpr87
product: G protein-coupled receptor 87
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048334788.1
SIO_010081: Gpr87
subclass of: SO_0000673
so part of: Gpr87
location: join(150915..151711,161872..161990,166929..169480)
location: region:150915-169480:1
so has part: feature:150915-151711:1:exon
so has part: feature:161872-161990:1:exon
so has part: feature:166929-169480:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150915-151711:1:exon

position:151711:1
position: 151711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161872-161990:1:exon

position:161872:1
position: 161872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161990:1
position: 161990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:166929-169480:1:exon

position:166929:1
position: 166929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gpr87
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Gpr87
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 87
translation: MGLNLTLTKLPNTELLGPRGHTLSNISDGLQRNATLHNKFDTIVLPVFYLIIFVASILLNGLAVWIFFHIRNKTSFIFYLKNIVVADLIMTLTFPFRIVHGAGFGPWYFKFILCRYTSVLFYANMYTSIVFLGLISIDRYLKVVKPFGDSRMYSITFTKVLSVCVWVIMAVLSLPNIILTNGQPTTDNIHECMELKSPLGVKWHKAVIYVNNCLFVAVLIILIGCYIAISRYIHKSSKQFISQSSRKRKHNQSIRVVVAVFFTCFLPYHLCRIPFTFSHLDRLLDESTHKILYYCKEMTLFLSACNVCLDPIIYFFMCRSFSKRLFKKSNIRTRSESIRSLQSVRRSEVRIYYDYTDV
SIO_010081: Gpr87
subclass of: SO_0000673
so part of: Gpr87
location: join(161957..161990,166929..167971)
location: region:161957-167971:1
so has part: feature:161957-161990:1:exon
so has part: feature:166929-167971:1:exon

XP_048190745.1
type: Protein
SIO_000068: ncbiprotein

position:161957:1
position: 161957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167971:1
position: 167971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161957-161990:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166929-167971:1:exon

LOC125342551
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 182009..194275
location: region:182009-194275:1
so has part: feature:182009-194275:1:exon
subclass of: SO_0000010

125342551
type: Gene
SIO_000068: ncbigene

position:182009:1
position: 182009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194275:1
position: 194275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182009-194275:1:exon

LOC125342551
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342551
product: P2Y purinoceptor 14-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048334787.1
SIO_010081: LOC125342551
subclass of: SO_0000673
so part of: LOC125342551
location: join(182009..182604,193118..194275)
location: region:182009-194275:1
so has part: feature:182009-182604:1:exon
so has part: feature:193118-194275:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182009-182604:1:exon

position:182604:1
position: 182604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:193118-194275:1:exon

position:193118:1
position: 193118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342551
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 14-like isoform X2
translation: MTFASTSYKMTNSTTTQPPEQPCPRNTLITQQIVPVLYCMIFVAGIILNGVSGWIFFYVPSSKSFIVYLKNIVVADFLMALTFPFKILRDSGLGPWQLNMFVCRVSAVLFYVNMYVSIMFFGLISFDRYYKIVKPILTSLIQSVNSSKLLSVVVWVLMLFLAVPNSILTNQSVSNVTEIQCMQLKNELGRKWHKASNYICLGIFWTVFLLLIIFYTAITRKIFKSHLKSTRNSTSVKRKSSRNIFSIVLVFFVCFVPYHIARIPYTQSQTEAHYSCQSKEILHHVKEFTLLLSAANICLDPIIYFFLCQPFREILHKKLHISLKAQNDQDTSKSKRGTTTHESIDTL
SIO_010081: LOC125342551
subclass of: SO_0000673
so part of: LOC125342551
location: join(182602..182604,193118..194158)
location: region:182602-194158:1
so has part: feature:182602-182604:1:exon
so has part: feature:193118-194158:1:exon

XP_048190744.1
type: Protein
SIO_000068: ncbiprotein

position:182602:1
position: 182602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194158:1
position: 194158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182602-182604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193118-194158:1:exon

LOC125342551
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342551
product: P2Y purinoceptor 14-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048334786.1
SIO_010081: LOC125342551
subclass of: SO_0000673
so part of: LOC125342551
location: join(182994..183164,193118..194275)
location: region:182994-194275:1
so has part: feature:182994-183164:1:exon
so has part: feature:193118-194275:1:exon

position:182994:1
position: 182994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182994-183164:1:exon

position:183164:1
position: 183164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:193118-194275:1:exon

LOC125342551
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 14-like isoform X1
translation: MQNTPDVFSETRNAWAAGVDLMTFASTSYKMTNSTTTQPPEQPCPRNTLITQQIVPVLYCMIFVAGIILNGVSGWIFFYVPSSKSFIVYLKNIVVADFLMALTFPFKILRDSGLGPWQLNMFVCRVSAVLFYVNMYVSIMFFGLISFDRYYKIVKPILTSLIQSVNSSKLLSVVVWVLMLFLAVPNSILTNQSVSNVTEIQCMQLKNELGRKWHKASNYICLGIFWTVFLLLIIFYTAITRKIFKSHLKSTRNSTSVKRKSSRNIFSIVLVFFVCFVPYHIARIPYTQSQTEAHYSCQSKEILHHVKEFTLLLSAANICLDPIIYFFLCQPFREILHKKLHISLKAQNDQDTSKSKRGTTTHESIDTL
SIO_010081: LOC125342551
subclass of: SO_0000673
so part of: LOC125342551
location: join(183099..183164,193118..194158)
location: region:183099-194158:1
so has part: feature:183099-183164:1:exon
so has part: feature:193118-194158:1:exon

XP_048190743.1
type: Protein
SIO_000068: ncbiprotein

position:183099:1
position: 183099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183099-183164:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193118-194158:1:exon

Clrn1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Clrn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 321440..353778
location: region:321440-353778:1
so has part: feature:321440-353778:1:exon
subclass of: SO_0000010

125342601
type: Gene
SIO_000068: ncbigene

position:321440:1
position: 321440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353778:1
position: 353778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321440-353778:1:exon

Clrn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Clrn1
product: clarin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334884.1
SIO_010081: Clrn1
subclass of: SO_0000673
so part of: Clrn1
location: join(321440..321692,343574..343753,353513..353778)
location: region:321440-353778:1
so has part: feature:321440-321692:1:exon
so has part: feature:343574-343753:1:exon
so has part: feature:353513-353778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:321440-321692:1:exon

position:321692:1
position: 321692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:343574-343753:1:exon

position:343574:1
position: 343574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343753:1
position: 343753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:353513-353778:1:exon

position:353513:1
position: 353513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Clrn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Clrn1
product: clarin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_048334885.1
SIO_010081: Clrn1
subclass of: SO_0000673
so part of: Clrn1
location: join(321440..321692,353513..353778)
location: region:321440-353778:1
so has part: feature:321440-321692:1:exon
so has part: feature:353513-353778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:321440-321692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353513-353778:1:exon

Clrn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Clrn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clarin-1 isoform X1
translation: MPSQQKKILFCMAGVLSFLCALGVVSALGTPLWIKATFLCKTGALLVNASGQELDKFMGEIRYGLFHGEGVRQCGLGARPFRFSFFPDLLQAVPVSIHINVLLFSSMLVVLTMVAAAFFMYNAFGKPFEALHGPLGLYLLSFISGSCGCLVMILFASEVKIHHLSEKIANFKEGTYAYKTQSEKYTTSFWVIFICFFVHFLNGLLIRLAGFQFPFAKSKDAETTNVAIDLMY
SIO_010081: Clrn1
subclass of: SO_0000673
so part of: Clrn1
location: join(321440..321692,343574..343753,353513..353778)
location: region:321440-353778:1
so has part: feature:321440-321692:1:exon
so has part: feature:343574-343753:1:exon
so has part: feature:353513-353778:1:exon

XP_048190841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321440-321692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343574-343753:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353513-353778:1:exon

Clrn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Clrn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clarin-1 isoform X2
translation: MPSQQKKILFCMAGVLSFLCALGVVSALGTPLWIKATFLCKTGALLVNASGQELDKFMGEIRYGLFHGEGVRQCGLGARPFRFSWSCGCLVMILFASEVKIHHLSEKIANFKEGTYAYKTQSEKYTTSFWVIFICFFVHFLNGLLIRLAGFQFPFAKSKDAETTNVAIDLMY
SIO_010081: Clrn1
subclass of: SO_0000673
so part of: Clrn1
location: join(321440..321692,353513..353778)
location: region:321440-353778:1
so has part: feature:321440-321692:1:exon
so has part: feature:353513-353778:1:exon

XP_048190842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321440-321692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353513-353778:1:exon

Mindy4b
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Mindy4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 358982..371177
location: region:358982-371177:1
so has part: feature:358982-371177:1:exon
subclass of: SO_0000010

125342310
type: Gene
SIO_000068: ncbigene

position:358982:1
position: 358982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371177:1
position: 371177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358982-371177:1:exon

Mindy4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Mindy4b
product: MINDY family member 4B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048334437.1
SIO_010081: Mindy4b
subclass of: SO_0000673
so part of: Mindy4b
location: join(358982..359073,359306..359333,361096..361215,362088..362179,363104..363257,363937..364002,365592..365662,366682..366754,367808..367969,370154..370334,371041..371177)
location: region:358982-371177:1
so has part: feature:358982-359073:1:exon
so has part: feature:359306-359333:1:exon
so has part: feature:361096-361215:1:exon
so has part: feature:362088-362179:1:exon
so has part: feature:363104-363257:1:exon
so has part: feature:363937-364002:1:exon
so has part: feature:365592-365662:1:exon
so has part: feature:366682-366754:1:exon
so has part: feature:367808-367969:1:exon
so has part: feature:370154-370334:1:exon
so has part: feature:371041-371177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358982-359073:1:exon

position:359073:1
position: 359073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:359306-359333:1:exon

position:359306:1
position: 359306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359333:1
position: 359333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:361096-361215:1:exon

position:361096:1
position: 361096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361215:1
position: 361215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:362088-362179:1:exon

position:362088:1
position: 362088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362179:1
position: 362179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:363104-363257:1:exon

position:363104:1
position: 363104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363257:1
position: 363257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:363937-364002:1:exon

position:363937:1
position: 363937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364002:1
position: 364002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:365592-365662:1:exon

position:365592:1
position: 365592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365662:1
position: 365662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:366682-366754:1:exon

position:366682:1
position: 366682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366754:1
position: 366754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:367808-367969:1:exon

position:367808:1
position: 367808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367969:1
position: 367969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:370154-370334:1:exon

position:370154:1
position: 370154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370334:1
position: 370334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:371041-371177:1:exon

position:371041:1
position: 371041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mindy4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Mindy4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B
translation: MDVEASQPGSEETTKKLLFLDKWREIFAYPRLGTNSTILQKLRQSLFGNMAQAFSCDWKKARFTFHRPSSDLAFTLEVTRGGAGSIQMAVQGSILKYLLFIRSRADSSVHRLHMLSRQEQEQALAMALADILWAAGEAGKATVSLAPEDMCTASSGDDFMERLHLFEFPEKEAMEKFIYDHIQCFKGEGSHGVILFLCSLVFSRTFERLQSDLDATTTHLLEPSTRGFLCRQAAVNLILTGRASPQVIDGYAEGGSQEVPHGVLTRSDIGYLQWSKDTSEGHSLPLVGSRLKTPRFPLWLCNINGRHSVLYCTDRQLLSDWKAERIFDLHFYSGHPSQKQPVRLTIDTHAHHWEQEHGADGSGRRCCPVEMVIRTKWREATVDWNGALPLF
SIO_010081: Mindy4b
subclass of: SO_0000673
so part of: Mindy4b
location: join(358982..359073,359306..359333,361096..361215,362088..362179,363104..363257,363937..364002,365592..365662,366682..366754,367808..367969,370154..370334,371041..371177)
location: region:358982-371177:1
so has part: feature:358982-359073:1:exon
so has part: feature:359306-359333:1:exon
so has part: feature:361096-361215:1:exon
so has part: feature:362088-362179:1:exon
so has part: feature:363104-363257:1:exon
so has part: feature:363937-364002:1:exon
so has part: feature:365592-365662:1:exon
so has part: feature:366682-366754:1:exon
so has part: feature:367808-367969:1:exon
so has part: feature:370154-370334:1:exon
so has part: feature:371041-371177:1:exon

XP_048190394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358982-359073:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359306-359333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361096-361215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362088-362179:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363104-363257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:363937-364002:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:365592-365662:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:366682-366754:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:367808-367969:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:370154-370334:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:371041-371177:1:exon

Siah2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Siah2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 395378..404367
location: region:395378-404367:1
so has part: feature:395378-404367:1:exon
subclass of: SO_0000010

125342533
type: Gene
SIO_000068: ncbigene

position:395378:1
position: 395378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404367:1
position: 404367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395378-404367:1:exon

Siah2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Siah2
product: siah E3 ubiquitin protein ligase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_048334758.1
SIO_010081: Siah2
subclass of: SO_0000673
so part of: Siah2
location: join(395378..396144,403278..404367)
location: region:395378-404367:1
so has part: feature:395378-396144:1:exon
so has part: feature:403278-404367:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:395378-396144:1:exon

position:396144:1
position: 396144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:403278-404367:1:exon

position:403278:1
position: 403278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Siah2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Siah2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SIAH2
translation: MSRPSSAGPSASKPGPKPPPPPLAPAPASAAPPAAATISAAGPGPAALPAAAAVIAGPGGGGPASPQHHELTSLFECPVCFDYVLPPILQCQAGHLVCNPCRQKLSCCPTCRGALTPSIRNLAMEKVASAVRFPCKYATTGCSLTLHHTEKPEHEDVCEHRPYACPCPGASCKWQGALESVMSHLMLAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAVVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAILNSDCLVFDTAIAHLFADNGNLGINVTISTCCP
SIO_010081: Siah2
subclass of: SO_0000673
so part of: Siah2
location: join(395737..396144,403278..403835)
location: region:395737-403835:1
so has part: feature:395737-396144:1:exon
so has part: feature:403278-403835:1:exon

XP_048190715.1
type: Protein
SIO_000068: ncbiprotein

position:395737:1
position: 395737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403835:1
position: 403835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395737-396144:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403278-403835:1:exon

Erich6
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Erich6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 410354..422310
location: region:410354-422310:1
so has part: feature:410354-422310:1:exon
subclass of: SO_0000010

125342311
type: Gene
SIO_000068: ncbigene

position:410354:1
position: 410354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422310:1
position: 422310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410354-422310:1:exon

Erich6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Erich6
product: glutamate rich 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334438.1
SIO_010081: Erich6
subclass of: SO_0000673
so part of: Erich6
location: join(410354..410795,412647..412738,413664..413679,414279..414444,414535..414651,415445..415546,417056..417213,417855..417925,418946..419091,419471..419556,419954..420109,420896..421124,422038..422310)
location: region:410354-422310:1
so has part: feature:410354-410795:1:exon
so has part: feature:412647-412738:1:exon
so has part: feature:413664-413679:1:exon
so has part: feature:414279-414444:1:exon
so has part: feature:414535-414651:1:exon
so has part: feature:415445-415546:1:exon
so has part: feature:417056-417213:1:exon
so has part: feature:417855-417925:1:exon
so has part: feature:418946-419091:1:exon
so has part: feature:419471-419556:1:exon
so has part: feature:419954-420109:1:exon
so has part: feature:420896-421124:1:exon
so has part: feature:422038-422310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:410354-410795:1:exon

position:410795:1
position: 410795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:412647-412738:1:exon

position:412647:1
position: 412647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412738:1
position: 412738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:413664-413679:1:exon

position:413664:1
position: 413664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413679:1
position: 413679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:414279-414444:1:exon

position:414279:1
position: 414279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414444:1
position: 414444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:414535-414651:1:exon

position:414535:1
position: 414535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414651:1
position: 414651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:415445-415546:1:exon

position:415445:1
position: 415445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415546:1
position: 415546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:417056-417213:1:exon

position:417056:1
position: 417056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417213:1
position: 417213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:417855-417925:1:exon

position:417855:1
position: 417855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417925:1
position: 417925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:418946-419091:1:exon

position:418946:1
position: 418946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419091:1
position: 419091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:419471-419556:1:exon

position:419471:1
position: 419471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419556:1
position: 419556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:419954-420109:1:exon

position:419954:1
position: 419954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420109:1
position: 420109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:420896-421124:1:exon

position:420896:1
position: 420896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421124:1
position: 421124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:422038-422310:1:exon

position:422038:1
position: 422038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Erich6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Erich6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate-rich protein 6
translation: MLHSTGFPKIFQTFRKDMSEVDLDRNIYQSLCPCISMSTQTEESWLQEIYGKLFAKEEEEDVKDKEDWVGRNLQTRTTRTLGMNFKPPFPPPPRPPSGRWVVNPEELRLSILCELEFKEDFITLFESPLRTLPSIGLPPVLSYKHEKATLDINYQDEEEEEHSLKCEFCGADLQAFFSYADLCSKPTGHSFCCHRFQNLINYIYEESQKMKGPAFELISIQPHAAHGSELDRIKAKEKALRRKQERQLARHFAMITSEPSNFSEEVDSKHLKTISYQLSMDVQEKKPTEDMYDFYIRNTKMSIICCDSRKACGKVVRNELLEKYYKQGNKFLTSFPDGTTQIFYPSGNLALIRVPNKTSGFTSIVQEDALVAPAVLAVLDSSGRASCYHPNGNVWVYINILGGQCSDQAGNRIRAWNWSRSTVSSSFVSFKPVFLALNNYVGIRILGQDKISITFLAMGQQARISVGTKVKLLQPWPLDIPTRLYLGEDDLMLLATLIKIRRLLHRLEGFTSFPSSQVREKLKQPSYLSSLCLKLIALCRSFGMPEDKMATIADIINEKL
SIO_010081: Erich6
subclass of: SO_0000673
so part of: Erich6
location: join(410722..410795,412647..412738,413664..413679,414279..414444,414535..414651,415445..415546,417056..417213,417855..417925,418946..419091,419471..419556,419954..420109,420896..421124,422038..422307)
location: region:410722-422307:1
so has part: feature:410722-410795:1:exon
so has part: feature:412647-412738:1:exon
so has part: feature:413664-413679:1:exon
so has part: feature:414279-414444:1:exon
so has part: feature:414535-414651:1:exon
so has part: feature:415445-415546:1:exon
so has part: feature:417056-417213:1:exon
so has part: feature:417855-417925:1:exon
so has part: feature:418946-419091:1:exon
so has part: feature:419471-419556:1:exon
so has part: feature:419954-420109:1:exon
so has part: feature:420896-421124:1:exon
so has part: feature:422038-422307:1:exon

XP_048190395.1
type: Protein
SIO_000068: ncbiprotein

position:410722:1
position: 410722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422307:1
position: 422307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410722-410795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412647-412738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413664-413679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414279-414444:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:414535-414651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415445-415546:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:417056-417213:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417855-417925:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:418946-419091:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:419471-419556:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:419954-420109:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:420896-421124:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:422038-422307:1:exon

Selenot
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Selenot
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(430330..444021)
location: region:430330-444021:-1
so has part: feature:430330-444021:-1:exon
subclass of: SO_0000010

125342605
type: Gene
SIO_000068: ncbigene

position:430330:-1
position: 430330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444021:-1
position: 444021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430330-444021:-1:exon

Selenot
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Selenot
product: selenoprotein T
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334892.1
SIO_010081: Selenot
subclass of: SO_0000673
so part of: Selenot
location: complement(join(430330..430991,431338..431491,433532..433619,436276..436402,436978..437088,443834..444021))
location: region:430330-444021:-1
so has part: feature:443834-444021:-1:exon
so has part: feature:436978-437088:-1:exon
so has part: feature:436276-436402:-1:exon
so has part: feature:433532-433619:-1:exon
so has part: feature:431338-431491:-1:exon
so has part: feature:430330-430991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443834-444021:-1:exon

position:443834:-1
position: 443834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:436978-437088:-1:exon

position:436978:-1
position: 436978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437088:-1
position: 437088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:436276-436402:-1:exon

position:436276:-1
position: 436276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436402:-1
position: 436402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:433532-433619:-1:exon

position:433532:-1
position: 433532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433619:-1
position: 433619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:431338-431491:-1:exon

position:431338:-1
position: 431338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431491:-1
position: 431491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:430330-430991:-1:exon

position:430991:-1
position: 430991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Selenot
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Selenot
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(437079..437081),aa:Sec)
product: thioredoxin reductase-like selenoprotein T
translation: MRFLLLLLVAASAVARSEASANLGGAPSKRLKMPYATGPLLKFQICVSUGYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYRHIASFLSIFKLVLIGLIIVGKDPFAFFGMQAPSIWQWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMKLNVHMDSIPHHRS
SIO_010081: Selenot
subclass of: SO_0000673
so part of: Selenot
location: complement(join(431367..431491,433532..433619,436276..436402,436978..437088,443834..443970))
location: region:431367-443970:-1
so has part: feature:443834-443970:-1:exon
so has part: feature:436978-437088:-1:exon
so has part: feature:436276-436402:-1:exon
so has part: feature:433532-433619:-1:exon
so has part: feature:431367-431491:-1:exon

XP_048190849.1
type: Protein
SIO_000068: ncbiprotein

position:431367:-1
position: 431367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443970:-1
position: 443970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443834-443970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436978-437088:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436276-436402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433532-433619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431367-431491:-1:exon

Eif2a
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Eif2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(446756..468561)
location: region:446756-468561:-1
so has part: feature:446756-468561:-1:exon
subclass of: SO_0000010

125342602
type: Gene
SIO_000068: ncbigene

position:446756:-1
position: 446756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468561:-1
position: 468561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446756-468561:-1:exon

Eif2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Eif2a
product: eukaryotic translation initiation factor 2A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048334887.1
SIO_010081: Eif2a
subclass of: SO_0000673
so part of: Eif2a
location: complement(join(446756..447092,448278..448343,448779..448907,449852..449965,451107..451678,453579..453695,456199..456281,456505..456604,459036..459154,462713..462787,463978..464047,468431..468507))
location: region:446756-468507:-1
so has part: feature:468431-468507:-1:exon
so has part: feature:463978-464047:-1:exon
so has part: feature:462713-462787:-1:exon
so has part: feature:459036-459154:-1:exon
so has part: feature:456505-456604:-1:exon
so has part: feature:456199-456281:-1:exon
so has part: feature:453579-453695:-1:exon
so has part: feature:451107-451678:-1:exon
so has part: feature:449852-449965:-1:exon
so has part: feature:448779-448907:-1:exon
so has part: feature:448278-448343:-1:exon
so has part: feature:446756-447092:-1:exon

position:468507:-1
position: 468507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468431-468507:-1:exon

position:468431:-1
position: 468431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:463978-464047:-1:exon

position:463978:-1
position: 463978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464047:-1
position: 464047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:462713-462787:-1:exon

position:462713:-1
position: 462713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462787:-1
position: 462787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:459036-459154:-1:exon

position:459036:-1
position: 459036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459154:-1
position: 459154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:456505-456604:-1:exon

position:456505:-1
position: 456505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456604:-1
position: 456604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:456199-456281:-1:exon

position:456199:-1
position: 456199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456281:-1
position: 456281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:453579-453695:-1:exon

position:453579:-1
position: 453579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453695:-1
position: 453695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:451107-451678:-1:exon

position:451107:-1
position: 451107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451678:-1
position: 451678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:449852-449965:-1:exon

position:449852:-1
position: 449852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449965:-1
position: 449965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:448779-448907:-1:exon

position:448779:-1
position: 448779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448907:-1
position: 448907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:448278-448343:-1:exon

position:448278:-1
position: 448278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448343:-1
position: 448343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:446756-447092:-1:exon

position:447092:-1
position: 447092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Eif2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Eif2a
product: eukaryotic translation initiation factor 2A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048334886.1
SIO_010081: Eif2a
subclass of: SO_0000673
so part of: Eif2a
location: complement(join(446757..447092,448278..448343,448779..448907,449852..449965,451107..451678,453579..453695,454332..454476,454558..454631,456199..456281,456505..456604,459036..459154,462713..462787,463978..464047,468431..468561))
location: region:446757-468561:-1
so has part: feature:468431-468561:-1:exon
so has part: feature:463978-464047:-1:exon
so has part: feature:462713-462787:-1:exon
so has part: feature:459036-459154:-1:exon
so has part: feature:456505-456604:-1:exon
so has part: feature:456199-456281:-1:exon
so has part: feature:454558-454631:-1:exon
so has part: feature:454332-454476:-1:exon
so has part: feature:453579-453695:-1:exon
so has part: feature:451107-451678:-1:exon
so has part: feature:449852-449965:-1:exon
so has part: feature:448779-448907:-1:exon
so has part: feature:448278-448343:-1:exon
so has part: feature:446757-447092:-1:exon

position:446757:-1
position: 446757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468431-468561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463978-464047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:462713-462787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459036-459154:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456505-456604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456199-456281:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:454558-454631:-1:exon

position:454558:-1
position: 454558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454631:-1
position: 454631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:454332-454476:-1:exon

position:454332:-1
position: 454332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454476:-1
position: 454476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:453579-453695:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451107-451678:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449852-449965:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448779-448907:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:448278-448343:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:446757-447092:-1:exon

Eif2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Eif2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 2A isoform X2
translation: MGFFFRNDMAPSAPLLTVRGSEGLYMVNGPPHFTESTVFPREPGKNCKVYTFSKDGTLFAWGNGEKVNIINVTNNGLLHSFDLPKVVCLEFSPKSTVLATWQPYTTSKDGTAGIPNLQLYDVKTGACLKSFIQKKMQNWCPSWSDDEIICARNVNNEVHFFENNNFTTAVLVIASTEVDKTGASYYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKATVFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLIAKPVASDSTYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSVLYKHDVPSNGELWQVSWQPFLDGVFPAKAITYQAVPSEVPSEEPKVATAYRPPALRNKPATNSKLHEEEPPQNMKPHPGGDKPLSKTALKNQRKHEAKKAAKQEARHDKSPDLAPASAPQSTPRNTISQSASGDPEIDRKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLELGV
SIO_010081: Eif2a
subclass of: SO_0000673
so part of: Eif2a
location: complement(join(447027..447092,448278..448343,448779..448907,449852..449965,451107..451678,453579..453695,456199..456281,456505..456604,459036..459154,462713..462787,463978..464047,468431..468482))
location: region:447027-468482:-1
so has part: feature:468431-468482:-1:exon
so has part: feature:463978-464047:-1:exon
so has part: feature:462713-462787:-1:exon
so has part: feature:459036-459154:-1:exon
so has part: feature:456505-456604:-1:exon
so has part: feature:456199-456281:-1:exon
so has part: feature:453579-453695:-1:exon
so has part: feature:451107-451678:-1:exon
so has part: feature:449852-449965:-1:exon
so has part: feature:448779-448907:-1:exon
so has part: feature:448278-448343:-1:exon
so has part: feature:447027-447092:-1:exon

XP_048190844.1
type: Protein
SIO_000068: ncbiprotein

position:447027:-1
position: 447027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468482:-1
position: 468482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468431-468482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463978-464047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:462713-462787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459036-459154:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456505-456604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456199-456281:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:453579-453695:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:451107-451678:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:449852-449965:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:448779-448907:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:448278-448343:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:447027-447092:-1:exon

Eif2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Eif2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 2A isoform X1
translation: MGFFFRNDMAPSAPLLTVRGSEGLYMVNGPPHFTESTVFPREPGKNCKVYTFSKDGTLFAWGNGEKVNIINVTNNGLLHSFDLPKVVCLEFSPKSTVLATWQPYTTSKDGTAGIPNLQLYDVKTGACLKSFIQKKMQNWCPSWSDDEIICARNVNNEVHFFENNNFNTIVNKLHLQKVNDFVLSPGPQPYKVAVCVPGSKGAPSFVRLYQYPNFTGPHAALANKSFFKADKVTMLWNKKATAVLVIASTEVDKTGASYYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKATVFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLIAKPVASDSTYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSVLYKHDVPSNGELWQVSWQPFLDGVFPAKAITYQAVPSEVPSEEPKVATAYRPPALRNKPATNSKLHEEEPPQNMKPHPGGDKPLSKTALKNQRKHEAKKAAKQEARHDKSPDLAPASAPQSTPRNTISQSASGDPEIDRKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLELGV
SIO_010081: Eif2a
subclass of: SO_0000673
so part of: Eif2a
location: complement(join(447027..447092,448278..448343,448779..448907,449852..449965,451107..451678,453579..453695,454332..454476,454558..454631,456199..456281,456505..456604,459036..459154,462713..462787,463978..464047,468431..468482))
location: region:447027-468482:-1
so has part: feature:468431-468482:-1:exon
so has part: feature:463978-464047:-1:exon
so has part: feature:462713-462787:-1:exon
so has part: feature:459036-459154:-1:exon
so has part: feature:456505-456604:-1:exon
so has part: feature:456199-456281:-1:exon
so has part: feature:454558-454631:-1:exon
so has part: feature:454332-454476:-1:exon
so has part: feature:453579-453695:-1:exon
so has part: feature:451107-451678:-1:exon
so has part: feature:449852-449965:-1:exon
so has part: feature:448779-448907:-1:exon
so has part: feature:448278-448343:-1:exon
so has part: feature:447027-447092:-1:exon

XP_048190843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468431-468482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463978-464047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:462713-462787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459036-459154:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456505-456604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456199-456281:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:454558-454631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:454332-454476:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:453579-453695:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451107-451678:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449852-449965:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448779-448907:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:448278-448343:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:447027-447092:-1:exon

Serp1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Serp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 468693..472408
location: region:468693-472408:1
so has part: feature:468693-472408:1:exon
subclass of: SO_0000010

125342606
type: Gene
SIO_000068: ncbigene

position:468693:1
position: 468693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472408:1
position: 472408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468693-472408:1:exon

Serp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Serp1
product: stress associated endoplasmic reticulum protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334893.1
SIO_010081: Serp1
subclass of: SO_0000673
so part of: Serp1
location: join(468693..469017,469352..469427,470536..472408)
location: region:468693-472408:1
so has part: feature:468693-469017:1:exon
so has part: feature:469352-469427:1:exon
so has part: feature:470536-472408:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:468693-469017:1:exon

position:469017:1
position: 469017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:469352-469427:1:exon

position:469352:1
position: 469352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469427:1
position: 469427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:470536-472408:1:exon

position:470536:1
position: 470536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Serp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Serp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stress-associated endoplasmic reticulum protein 1
translation: MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMGM
SIO_010081: Serp1
subclass of: SO_0000673
so part of: Serp1
location: join(468934..469017,469352..469427,470536..470576)
location: region:468934-470576:1
so has part: feature:468934-469017:1:exon
so has part: feature:469352-469427:1:exon
so has part: feature:470536-470576:1:exon

XP_048190850.1
type: Protein
SIO_000068: ncbiprotein

position:468934:1
position: 468934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470576:1
position: 470576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468934-469017:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:469352-469427:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:470536-470576:1:exon

Tsc22d2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tsc22d2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(481468..512566)
location: region:481468-512566:-1
so has part: feature:481468-512566:-1:exon
subclass of: SO_0000010

125342603
type: Gene
SIO_000068: ncbigene

position:481468:-1
position: 481468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512566:-1
position: 512566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481468-512566:-1:exon

Tsc22d2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tsc22d2
product: TSC22 domain family member 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334888.1
SIO_010081: Tsc22d2
subclass of: SO_0000673
so part of: Tsc22d2
location: complement(join(481468..483998,484478..484529,502758..502829,511055..512463))
location: region:481468-512463:-1
so has part: feature:511055-512463:-1:exon
so has part: feature:502758-502829:-1:exon
so has part: feature:484478-484529:-1:exon
so has part: feature:481468-483998:-1:exon

position:512463:-1
position: 512463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511055-512463:-1:exon

position:511055:-1
position: 511055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:502758-502829:-1:exon

position:502758:-1
position: 502758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502829:-1
position: 502829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:484478-484529:-1:exon

position:484478:-1
position: 484478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484529:-1
position: 484529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:481468-483998:-1:exon

position:483998:-1
position: 483998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tsc22d2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tsc22d2
product: TSC22 domain family member 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334889.1
SIO_010081: Tsc22d2
subclass of: SO_0000673
so part of: Tsc22d2
location: complement(join(481468..483998,484478..484529,511055..512452))
location: region:481468-512452:-1
so has part: feature:511055-512452:-1:exon
so has part: feature:484478-484529:-1:exon
so has part: feature:481468-483998:-1:exon

position:512452:-1
position: 512452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511055-512452:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484478-484529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481468-483998:-1:exon

Tsc22d2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tsc22d2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TSC22 domain family protein 2 isoform X2
translation: MSKMPAKKKSCFQITSVTTAQAASSLAEDTESLDDPDESRTEDVSSEIFDVSRATDFGPEEACERSSSEETLNNVGEAETPGAVSPNLPPDGPAGRGAAPAPAPAPAAAPPPPAAAAAACSSRFRVIKLDHGSGEPYRRGRWTCVEYYERDADGSVLARSADCIRHAGAIEPAAERDSGLGATGGSVVVVLAAGPGARGPDSGADVAPLESAGAAPAPGSLPLPPAAYPPAAPPSSGPSDYRPPPQHVAGRPSPGPAPPAAAAASSLPGEAGAAGGGGFLPSGGLPAAAPGLPSTVPAAGPAPSVPGVPTASVTMPNAPAPPGRPSQPGGLAPAGRGASLAQAPGTHSAPTSLPQADLSQFQTQPLAGPADDARRKSEPLPQPPLSLLAENAPAADSPAQTMQLTPVNSLAGSVFGIAIPVDGDEDSASGGGVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSNNDQLSQLPAQQANPGSTSQQPAVTAQPPQPAQPPQQPNVSSA
SIO_010081: Tsc22d2
subclass of: SO_0000673
so part of: Tsc22d2
location: complement(join(483738..483998,484478..484529,511055..512334))
location: region:483738-512334:-1
so has part: feature:511055-512334:-1:exon
so has part: feature:484478-484529:-1:exon
so has part: feature:483738-483998:-1:exon

XP_048190846.1
type: Protein
SIO_000068: ncbiprotein

position:483738:-1
position: 483738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512334:-1
position: 512334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511055-512334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484478-484529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483738-483998:-1:exon

Tsc22d2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tsc22d2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TSC22 domain family protein 2 isoform X1
translation: MSKMPAKKKSCFQITSVTTAQAASSLAEDTESLDDPDESRTEDVSSEIFDVSRATDFGPEEACERSSSEETLNNVGEAETPGAVSPNLPPDGPAGRGAAPAPAPAPAAAPPPPAAAAAACSSRFRVIKLDHGSGEPYRRGRWTCVEYYERDADGSVLARSADCIRHAGAIEPAAERDSGLGATGGSVVVVLAAGPGARGPDSGADVAPLESAGAAPAPGSLPLPPAAYPPAAPPSSGPSDYRPPPQHVAGRPSPGPAPPAAAAASSLPGEAGAAGGGGFLPSGGLPAAAPGLPSTVPAAGPAPSVPGVPTASVTMPNAPAPPGRPSQPGGLAPAGRGASLAQAPGTHSAPTSLPQADLSQFQTQPLAGPADDARRKSEPLPQPPLSLLAENAPAADSPAQTMQLTPVNSLAGSVFGIAIPVDGDEDRNPSTAFYQAFHLNTFQESKSLWDSASGGGVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSNNDQLSQLPAQQANPGSTSQQPAVTAQPPQPAQPPQQPNVSSA
SIO_010081: Tsc22d2
subclass of: SO_0000673
so part of: Tsc22d2
location: complement(join(483738..483998,484478..484529,502758..502829,511055..512334))
location: region:483738-512334:-1
so has part: feature:511055-512334:-1:exon
so has part: feature:502758-502829:-1:exon
so has part: feature:484478-484529:-1:exon
so has part: feature:483738-483998:-1:exon

XP_048190845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511055-512334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502758-502829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:484478-484529:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:483738-483998:-1:exon

Tsc22d2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 214514
gene: Tsc22d2
product: TSC22 domain family member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007209245.1
SIO_010081: Tsc22d2
so part of: Tsc22d2
location: complement(join(484481..484529,496090..496248,502758..502829,511055..512566))
location: region:484481-512566:-1
so has part: feature:511055-512566:-1:exon
so has part: feature:502758-502829:-1:exon
so has part: feature:496090-496248:-1:exon
so has part: feature:484481-484529:-1:exon

position:484481:-1
position: 484481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511055-512566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502758-502829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496090-496248:-1:exon

position:496090:-1
position: 496090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496248:-1
position: 496248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:484481-484529:-1:exon

Tsc22d2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tsc22d2
product: TSC22 domain family member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048334891.1
SIO_010081: Tsc22d2
subclass of: SO_0000673
so part of: Tsc22d2
location: complement(join(495671..496248,502758..502829,511055..512566))
location: region:495671-512566:-1
so has part: feature:511055-512566:-1:exon
so has part: feature:502758-502829:-1:exon
so has part: feature:495671-496248:-1:exon

position:495671:-1
position: 495671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511055-512566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502758-502829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495671-496248:-1:exon

Tsc22d2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tsc22d2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TSC22 domain family protein 2 isoform X3
translation: MSKMPAKKKSCFQITSVTTAQAASSLAEDTESLDDPDESRTEDVSSEIFDVSRATDFGPEEACERSSSEETLNNVGEAETPGAVSPNLPPDGPAGRGAAPAPAPAPAAAPPPPAAAAAACSSRFRVIKLDHGSGEPYRRGRWTCVEYYERDADGSVLARSADCIRHAGAIEPAAERDSGLGATGGSVVVVLAAGPGARGPDSGADVAPLESAGAAPAPGSLPLPPAAYPPAAPPSSGPSDYRPPPQHVAGRPSPGPAPPAAAAASSLPGEAGAAGGGGFLPSGGLPAAAPGLPSTVPAAGPAPSVPGVPTASVTMPNAPAPPGRPSQPGGLAPAGRGASLAQAPGTHSAPTSLPQADLSQFQTQPLAGPADDARRKSEPLPQPPLSLLAENAPAADSPAQTMQLTPVNSLAGSVFGIAIPVDGDEDRNPSTAFYQAFHLNTFQESKSLWDRIFFRIQHRRRNVT
SIO_010081: Tsc22d2
subclass of: SO_0000673
so part of: Tsc22d2
location: complement(join(496206..496248,502758..502829,511055..512334))
location: region:496206-512334:-1
so has part: feature:511055-512334:-1:exon
so has part: feature:502758-502829:-1:exon
so has part: feature:496206-496248:-1:exon

XP_048190848.1
type: Protein
SIO_000068: ncbiprotein

position:496206:-1
position: 496206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511055-512334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502758-502829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496206-496248:-1:exon

LOC125342537
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(532278..550779)
location: region:532278-550779:-1
so has part: feature:532278-550779:-1:exon
subclass of: SO_0000011

125342537
type: Gene
SIO_000068: ncbigene

position:532278:-1
position: 532278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550779:-1
position: 550779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532278-550779:-1:exon

LOC125342537
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342537
product: uncharacterized LOC125342537
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007209241.1
SIO_010081: LOC125342537
subclass of: SO_0000673
so part of: LOC125342537
location: complement(join(532278..532478,550318..550507,550717..550779))
location: region:532278-550779:-1
so has part: feature:550717-550779:-1:exon
so has part: feature:550318-550507:-1:exon
so has part: feature:532278-532478:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550717-550779:-1:exon

position:550717:-1
position: 550717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550318-550507:-1:exon

position:550318:-1
position: 550318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550507:-1
position: 550507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:532278-532478:-1:exon

position:532478:-1
position: 532478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pfn2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Pfn2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 613283..632570
location: region:613283-632570:1
so has part: feature:613283-632570:1:exon
subclass of: SO_0000010

125342639
type: Gene
SIO_000068: ncbigene

position:613283:1
position: 613283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632570:1
position: 632570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613283-632570:1:exon

Pfn2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pfn2
product: profilin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048334932.1
SIO_010081: Pfn2
subclass of: SO_0000673
so part of: Pfn2
location: join(613283..613477,615262..615454,631863..632570)
location: region:613283-632570:1
so has part: feature:613283-613477:1:exon
so has part: feature:615262-615454:1:exon
so has part: feature:631863-632570:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:613283-613477:1:exon

position:613477:1
position: 613477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615262-615454:1:exon

position:615262:1
position: 615262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615454:1
position: 615454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:631863-632570:1:exon

position:631863:1
position: 631863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pfn2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pfn2
product: profilin 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334933.1
SIO_010081: Pfn2
subclass of: SO_0000673
so part of: Pfn2
location: join(613289..613477,615262..615454,617069..618761)
location: region:613289-618761:1
so has part: feature:613289-613477:1:exon
so has part: feature:615262-615454:1:exon
so has part: feature:617069-618761:1:exon

position:613289:1
position: 613289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618761:1
position: 618761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613289-613477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615262-615454:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617069-618761:1:exon

position:617069:1
position: 617069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pfn2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pfn2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: profilin-2 isoform X1
translation: MAGWQSYVDNLMCDGCCQEAAIVGYCDAKYVWAATAGGVFQSITPLEIDMIVGKDREGFFTNGLTLGAKKCSVIRDSLYVDGDCTMDIRTKSQGGEPTYNVAVGRAGRGFPLSTSHLELDFRGLVPSWQALLIDEGSGNERLL
SIO_010081: Pfn2
subclass of: SO_0000673
so part of: Pfn2
location: join(613346..613477,615262..615454,631863..631969)
location: region:613346-631969:1
so has part: feature:613346-613477:1:exon
so has part: feature:615262-615454:1:exon
so has part: feature:631863-631969:1:exon

XP_048190889.1
type: Protein
SIO_000068: ncbiprotein

position:613346:1
position: 613346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631969:1
position: 631969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613346-613477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615262-615454:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:631863-631969:1:exon

Pfn2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pfn2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: profilin-2 isoform X2
translation: MAGWQSYVDNLMCDGCCQEAAIVGYCDAKYVWAATAGGVFQSITPLEIDMIVGKDREGFFTNGLTLGAKKCSVIRDSLYVDGDCTMDIRTKSQGGEPTYNVAVGRAGRVLVFVMGKEGVHGGGLNKKAYSMAKYLRDSGF
SIO_010081: Pfn2
subclass of: SO_0000673
so part of: Pfn2
location: join(613346..613477,615262..615454,617069..617166)
location: region:613346-617166:1
so has part: feature:613346-613477:1:exon
so has part: feature:615262-615454:1:exon
so has part: feature:617069-617166:1:exon

XP_048190890.1
type: Protein
SIO_000068: ncbiprotein

position:617166:1
position: 617166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613346-613477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615262-615454:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617069-617166:1:exon

Rnf13
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Rnf13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(621432..662191)
location: region:621432-662191:-1
so has part: feature:621432-662191:-1:exon
subclass of: SO_0000010

125342637
type: Gene
SIO_000068: ncbigene

position:621432:-1
position: 621432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662191:-1
position: 662191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621432-662191:-1:exon

Rnf13
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 214514
gene: Rnf13
product: ring finger protein 13, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007209254.1
SIO_010081: Rnf13
so part of: Rnf13
location: complement(join(621432..622659,622758..623194,623442..623522,625189..625282,628128..628233,633061..633151,636065..636152,649395..649520,650720..650800,653046..653172,662065..662191))
location: region:621432-662191:-1
so has part: feature:662065-662191:-1:exon
so has part: feature:653046-653172:-1:exon
so has part: feature:650720-650800:-1:exon
so has part: feature:649395-649520:-1:exon
so has part: feature:636065-636152:-1:exon
so has part: feature:633061-633151:-1:exon
so has part: feature:628128-628233:-1:exon
so has part: feature:625189-625282:-1:exon
so has part: feature:623442-623522:-1:exon
so has part: feature:622758-623194:-1:exon
so has part: feature:621432-622659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662065-662191:-1:exon

position:662065:-1
position: 662065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:653046-653172:-1:exon

position:653046:-1
position: 653046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653172:-1
position: 653172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:650720-650800:-1:exon

position:650720:-1
position: 650720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650800:-1
position: 650800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:649395-649520:-1:exon

position:649395:-1
position: 649395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649520:-1
position: 649520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:636065-636152:-1:exon

position:636065:-1
position: 636065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636152:-1
position: 636152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:633061-633151:-1:exon

position:633061:-1
position: 633061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633151:-1
position: 633151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:628128-628233:-1:exon

position:628128:-1
position: 628128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628233:-1
position: 628233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:625189-625282:-1:exon

position:625189:-1
position: 625189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625282:-1
position: 625282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:623442-623522:-1:exon

position:623442:-1
position: 623442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623522:-1
position: 623522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:622758-623194:-1:exon

position:622758:-1
position: 622758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623194:-1
position: 623194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:621432-622659:-1:exon

position:622659:-1
position: 622659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rnf13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rnf13
product: ring finger protein 13, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048334930.1
SIO_010081: Rnf13
subclass of: SO_0000673
so part of: Rnf13
location: complement(join(621432..623194,623442..623522,625189..625282,628128..628233,633061..633151,636065..636152,649395..649520,650720..650800,662065..662135))
location: region:621432-662135:-1
so has part: feature:662065-662135:-1:exon
so has part: feature:650720-650800:-1:exon
so has part: feature:649395-649520:-1:exon
so has part: feature:636065-636152:-1:exon
so has part: feature:633061-633151:-1:exon
so has part: feature:628128-628233:-1:exon
so has part: feature:625189-625282:-1:exon
so has part: feature:623442-623522:-1:exon
so has part: feature:621432-623194:-1:exon

position:662135:-1
position: 662135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662065-662135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:650720-650800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649395-649520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636065-636152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633061-633151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628128-628233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625189-625282:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:623442-623522:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:621432-623194:-1:exon

Rnf13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rnf13
product: ring finger protein 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048334928.1
SIO_010081: Rnf13
subclass of: SO_0000673
so part of: Rnf13
location: complement(join(621432..623194,623442..623522,625189..625282,628128..628233,633061..633151,636065..636152,649395..649520,650720..650800,653046..653178))
location: region:621432-653178:-1
so has part: feature:653046-653178:-1:exon
so has part: feature:650720-650800:-1:exon
so has part: feature:649395-649520:-1:exon
so has part: feature:636065-636152:-1:exon
so has part: feature:633061-633151:-1:exon
so has part: feature:628128-628233:-1:exon
so has part: feature:625189-625282:-1:exon
so has part: feature:623442-623522:-1:exon
so has part: feature:621432-623194:-1:exon

position:653178:-1
position: 653178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653046-653178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:650720-650800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649395-649520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636065-636152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633061-633151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628128-628233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625189-625282:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:623442-623522:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:621432-623194:-1:exon

Rnf13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rnf13
product: ring finger protein 13, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048334929.1
SIO_010081: Rnf13
subclass of: SO_0000673
so part of: Rnf13
location: complement(join(621432..623194,623442..623522,625189..625282,628128..628233,633061..633151,636055..636152,649395..649520))
location: region:621432-649520:-1
so has part: feature:649395-649520:-1:exon
so has part: feature:636055-636152:-1:exon
so has part: feature:633061-633151:-1:exon
so has part: feature:628128-628233:-1:exon
so has part: feature:625189-625282:-1:exon
so has part: feature:623442-623522:-1:exon
so has part: feature:621432-623194:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:649395-649520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:636055-636152:-1:exon

position:636055:-1
position: 636055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:633061-633151:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:628128-628233:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:625189-625282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:623442-623522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:621432-623194:-1:exon

Rnf13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rnf13
product: ring finger protein 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048334927.1
SIO_010081: Rnf13
subclass of: SO_0000673
so part of: Rnf13
location: complement(join(621433..623194,623442..623522,625189..625282,628128..628233,633061..633151,636065..636152,649395..649520,650720..650800,653046..653172,662065..662191))
location: region:621433-662191:-1
so has part: feature:662065-662191:-1:exon
so has part: feature:653046-653172:-1:exon
so has part: feature:650720-650800:-1:exon
so has part: feature:649395-649520:-1:exon
so has part: feature:636065-636152:-1:exon
so has part: feature:633061-633151:-1:exon
so has part: feature:628128-628233:-1:exon
so has part: feature:625189-625282:-1:exon
so has part: feature:623442-623522:-1:exon
so has part: feature:621433-623194:-1:exon

position:621433:-1
position: 621433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662065-662191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653046-653172:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:650720-650800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:649395-649520:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:636065-636152:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:633061-633151:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628128-628233:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625189-625282:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:623442-623522:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:621433-623194:-1:exon

Rnf13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rnf13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF13 isoform X1
translation: MLLSIGMLMLSATQIYTILTVQLFASLNLLPVEANILAYNFENASQTFEDLPARFGYRLPTEGLKGFLINSKPENACEPIAPPPLKDNSSNTFVVLIRRLDCNFDVKVLNAQRAGYKAAIVHNVESEDLISMGSNDIDVLKKIDIPSVFIGESSANSLKDEFTYEKGGHIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSREENEVSEHTPLLRPFASVSTQSFGALSEAHSQQNVTESSDYEEDDNEDTDSSDAENEGSDHSVVVQLQPGEHGYNIANTV
SIO_010081: Rnf13
subclass of: SO_0000673
so part of: Rnf13
location: complement(join(622833..623194,623442..623522,625189..625282,628128..628233,633061..633151,636065..636152,649395..649520,650720..650800,653046..653159))
location: region:622833-653159:-1
so has part: feature:653046-653159:-1:exon
so has part: feature:650720-650800:-1:exon
so has part: feature:649395-649520:-1:exon
so has part: feature:636065-636152:-1:exon
so has part: feature:633061-633151:-1:exon
so has part: feature:628128-628233:-1:exon
so has part: feature:625189-625282:-1:exon
so has part: feature:623442-623522:-1:exon
so has part: feature:622833-623194:-1:exon

XP_048190884.1
type: Protein
SIO_000068: ncbiprotein

position:622833:-1
position: 622833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653159:-1
position: 653159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653046-653159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:650720-650800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649395-649520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636065-636152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633061-633151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628128-628233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625189-625282:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:623442-623522:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:622833-623194:-1:exon

Rnf13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rnf13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF13 isoform X1
translation: MLLSIGMLMLSATQIYTILTVQLFASLNLLPVEANILAYNFENASQTFEDLPARFGYRLPTEGLKGFLINSKPENACEPIAPPPLKDNSSNTFVVLIRRLDCNFDVKVLNAQRAGYKAAIVHNVESEDLISMGSNDIDVLKKIDIPSVFIGESSANSLKDEFTYEKGGHIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSREENEVSEHTPLLRPFASVSTQSFGALSEAHSQQNVTESSDYEEDDNEDTDSSDAENEGSDHSVVVQLQPGEHGYNIANTV
SIO_010081: Rnf13
subclass of: SO_0000673
so part of: Rnf13
location: complement(join(622833..623194,623442..623522,625189..625282,628128..628233,633061..633151,636065..636152,649395..649520,650720..650800,653046..653159))
location: region:622833-653159:-1
so has part: feature:653046-653159:-1:exon
so has part: feature:650720-650800:-1:exon
so has part: feature:649395-649520:-1:exon
so has part: feature:636065-636152:-1:exon
so has part: feature:633061-633151:-1:exon
so has part: feature:628128-628233:-1:exon
so has part: feature:625189-625282:-1:exon
so has part: feature:623442-623522:-1:exon
so has part: feature:622833-623194:-1:exon

XP_048190885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:653046-653159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:650720-650800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649395-649520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636065-636152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633061-633151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628128-628233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625189-625282:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:623442-623522:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:622833-623194:-1:exon

Rnf13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rnf13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF13 isoform X2
translation: MLSLRTSLAWDPTTVSTVDVLKKIDIPSVFIGESSANSLKDEFTYEKGGHIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSREENEVSEHTPLLRPFASVSTQSFGALSEAHSQQNVTESSDYEEDDNEDTDSSDAENEGSDHSVVVQLQPGEHGYNIANTV
SIO_010081: Rnf13
subclass of: SO_0000673
so part of: Rnf13
location: complement(join(622833..623194,623442..623522,625189..625282,628128..628233,633061..633151,636055..636106))
location: region:622833-636106:-1
so has part: feature:636055-636106:-1:exon
so has part: feature:633061-633151:-1:exon
so has part: feature:628128-628233:-1:exon
so has part: feature:625189-625282:-1:exon
so has part: feature:623442-623522:-1:exon
so has part: feature:622833-623194:-1:exon

XP_048190886.1
type: Protein
SIO_000068: ncbiprotein

position:636106:-1
position: 636106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636055-636106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633061-633151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:628128-628233:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625189-625282:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:623442-623522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:622833-623194:-1:exon

Rnf13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rnf13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF13 isoform X3
translation: MGSNDIDVLKKIDIPSVFIGESSANSLKDEFTYEKGGHIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSREENEVSEHTPLLRPFASVSTQSFGALSEAHSQQNVTESSDYEEDDNEDTDSSDAENEGSDHSVVVQLQPGEHGYNIANTV
SIO_010081: Rnf13
subclass of: SO_0000673
so part of: Rnf13
location: complement(join(622833..623194,623442..623522,625189..625282,628128..628233,633061..633151,636065..636080))
location: region:622833-636080:-1
so has part: feature:636065-636080:-1:exon
so has part: feature:633061-633151:-1:exon
so has part: feature:628128-628233:-1:exon
so has part: feature:625189-625282:-1:exon
so has part: feature:623442-623522:-1:exon
so has part: feature:622833-623194:-1:exon

XP_048190887.1
type: Protein
SIO_000068: ncbiprotein

position:636080:-1
position: 636080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636065-636080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633061-633151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:628128-628233:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625189-625282:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:623442-623522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:622833-623194:-1:exon

LOC125342641
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(646033..649382)
location: region:646033-649382:-1
so has part: feature:646033-649382:-1:exon
subclass of: SO_0000011

125342641
type: Gene
SIO_000068: ncbigene

position:646033:-1
position: 646033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649382:-1
position: 649382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646033-649382:-1:exon

LOC125342641
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342641
product: uncharacterized LOC125342641
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007209255.1
SIO_010081: LOC125342641
subclass of: SO_0000673
so part of: LOC125342641
location: complement(join(646033..647450,647686..649382))
location: region:646033-649382:-1
so has part: feature:647686-649382:-1:exon
so has part: feature:646033-647450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:647686-649382:-1:exon

position:647686:-1
position: 647686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:646033-647450:-1:exon

position:647450:-1
position: 647450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ankub1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ankub1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 664148..681324
location: region:664148-681324:1
so has part: feature:664148-681324:1:exon
subclass of: SO_0000010

125342636
type: Gene
SIO_000068: ncbigene

position:664148:1
position: 664148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681324:1
position: 681324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664148-681324:1:exon

Ankub1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ankub1
product: ankyrin repeat and ubiquitin domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048334925.1
SIO_010081: Ankub1
subclass of: SO_0000673
so part of: Ankub1
location: join(664148..665271,665749..665892,670646..670862,675671..675785,677705..678640,681089..681324)
location: region:664148-681324:1
so has part: feature:664148-665271:1:exon
so has part: feature:665749-665892:1:exon
so has part: feature:670646-670862:1:exon
so has part: feature:675671-675785:1:exon
so has part: feature:677705-678640:1:exon
so has part: feature:681089-681324:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:664148-665271:1:exon

position:665271:1
position: 665271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:665749-665892:1:exon

position:665749:1
position: 665749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665892:1
position: 665892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:670646-670862:1:exon

position:670646:1
position: 670646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670862:1
position: 670862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:675671-675785:1:exon

position:675671:1
position: 675671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675785:1
position: 675785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:677705-678640:1:exon

position:677705:1
position: 677705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678640:1
position: 678640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:681089-681324:1:exon

position:681089:1
position: 681089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ankub1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ankub1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ANKUB1 isoform X1
translation: MRIFIAFEGSFEPFDVSADETVETVKLMIKDYFHIPLSEDKQGRRYLELVYAGAALRNSWSLADVGISSCSTLKCFVKEEDKPILYVFNAVTQETMPVLEDISLLGKKVSDLRTLVTQRCGLPVSVYCLRTPQGLEMYDCNTLEDYQMDLGTTLRLDVWDGWKEFLMGCLLGQKLKVQRYLSKEGPVLKYQRRVALYMAAFHGYTDLSEWALKQGAKPHEAVGAHPYRAWCYEALHADVSRCPVHAAAETGRLLILKAFVNCSVLCLVCKDAAGQTPLTIAARHGHEDCVLYLLNKMWSTVSFLKIAVPMMIYIKIKQWILRAQNHSLHKSQLSRARGSGAKVGDTVMVDGFTTPRMTSKSWQKAGNRDSQSTLSKLPPLKEQTSRKAGSSLVVSQRCSRDQTLTLPPQVDANMFSDLQRHQQENWKRTTAPNGKQEMHIKNTYLPQVPLPPFSRVGYSHPSFYYAMPHAEGLLRSSFASFSQYSGRTPRENAVYCLAVASAFKEKRWLQQLGIARVLAKKSISTLTTQEGLAMCENHPEITL
SIO_010081: Ankub1
subclass of: SO_0000673
so part of: Ankub1
location: join(665182..665271,665749..665892,670646..670862,675671..675785,677705..678640,681089..681218)
location: region:665182-681218:1
so has part: feature:665182-665271:1:exon
so has part: feature:665749-665892:1:exon
so has part: feature:670646-670862:1:exon
so has part: feature:675671-675785:1:exon
so has part: feature:677705-678640:1:exon
so has part: feature:681089-681218:1:exon

XP_048190882.1
type: Protein
SIO_000068: ncbiprotein

position:665182:1
position: 665182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681218:1
position: 681218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665182-665271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:665749-665892:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:670646-670862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675671-675785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:677705-678640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681089-681218:1:exon

Ankub1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ankub1
product: ankyrin repeat and ubiquitin domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048334926.1
SIO_010081: Ankub1
subclass of: SO_0000673
so part of: Ankub1
location: join(665489..665892,670646..670780,675671..675785,677705..678640,681089..681324)
location: region:665489-681324:1
so has part: feature:665489-665892:1:exon
so has part: feature:670646-670780:1:exon
so has part: feature:675671-675785:1:exon
so has part: feature:677705-678640:1:exon
so has part: feature:681089-681324:1:exon

position:665489:1
position: 665489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665489-665892:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670646-670780:1:exon

position:670780:1
position: 670780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:675671-675785:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:677705-678640:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:681089-681324:1:exon

Ankub1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ankub1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ANKUB1 isoform X2
translation: MWPPRTTLRLDVWDGWKEFLMGCLLGQKLKVQRYLSKEGPVLKYQRRVALYMAAFHGYTDLSEWALKQGAKPHEAVGAHPYRAWCYEALHADVSRCPVHAAAETGRLLILKAFVNCSVLCLVCKDAAGQTPLTIAARHGHEDCVLYLLNKMWSTVSFLKIAVPMMIYIKIKQWILRAQNHSLHKSQLSRARGSGAKVGDTVMVDGFTTPRMTSKSWQKAGNRDSQSTLSKLPPLKEQTSRKAGSSLVVSQRCSRDQTLTLPPQVDANMFSDLQRHQQENWKRTTAPNGKQEMHIKNTYLPQVPLPPFSRVGYSHPSFYYAMPHAEGLLRSSFASFSQYSGRTPRENAVYCLAVASAFKEKRWLQQLGIARVLAKKSISTLTTQEGLAMCENHPEITL
SIO_010081: Ankub1
subclass of: SO_0000673
so part of: Ankub1
location: join(670768..670780,675671..675785,677705..678640,681089..681218)
location: region:670768-681218:1
so has part: feature:670768-670780:1:exon
so has part: feature:675671-675785:1:exon
so has part: feature:677705-678640:1:exon
so has part: feature:681089-681218:1:exon

XP_048190883.1
type: Protein
SIO_000068: ncbiprotein

position:670768:1
position: 670768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670768-670780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675671-675785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677705-678640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:681089-681218:1:exon

Commd2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Commd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 683255..687756
location: region:683255-687756:1
so has part: feature:683255-687756:1:exon
subclass of: SO_0000010

125342638
type: Gene
SIO_000068: ncbigene

position:683255:1
position: 683255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687756:1
position: 687756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683255-687756:1:exon

Commd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Commd2
product: COMM domain containing 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334931.1
SIO_010081: Commd2
subclass of: SO_0000673
so part of: Commd2
location: join(683255..683372,683464..683541,684432..684514,685042..685215,687303..687756)
location: region:683255-687756:1
so has part: feature:683255-683372:1:exon
so has part: feature:683464-683541:1:exon
so has part: feature:684432-684514:1:exon
so has part: feature:685042-685215:1:exon
so has part: feature:687303-687756:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683255-683372:1:exon

position:683372:1
position: 683372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:683464-683541:1:exon

position:683464:1
position: 683464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683541:1
position: 683541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:684432-684514:1:exon

position:684432:1
position: 684432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684514:1
position: 684514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:685042-685215:1:exon

position:685042:1
position: 685042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685215:1
position: 685215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:687303-687756:1:exon

position:687303:1
position: 687303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Commd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Commd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COMM domain-containing protein 2
translation: MLLDLSAEHREHLAFLPQVDRAVVAEFGRIAVEFLRRGSNPKVYDGAARKLNVSSDTIQHGVEGLTYLLTESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRSILSELSPALPSYHSLEWRLDVQLASRSLRQQIKPSVTLKLHLDQNGGHSTRVVQTDPATLLHLVQQLEQALAEMKTSHCRRVIRNIK
SIO_010081: Commd2
subclass of: SO_0000673
so part of: Commd2
location: join(683306..683372,683464..683541,684432..684514,685042..685215,687303..687500)
location: region:683306-687500:1
so has part: feature:683306-683372:1:exon
so has part: feature:683464-683541:1:exon
so has part: feature:684432-684514:1:exon
so has part: feature:685042-685215:1:exon
so has part: feature:687303-687500:1:exon

XP_048190888.1
type: Protein
SIO_000068: ncbiprotein

position:683306:1
position: 683306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687500:1
position: 687500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683306-683372:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:683464-683541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684432-684514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:685042-685215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:687303-687500:1:exon

Wwtr1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Wwtr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 706879..759145
location: region:706879-759145:1
so has part: feature:706879-759145:1:exon
subclass of: SO_0000010

125342427
type: Gene
SIO_000068: ncbigene

position:706879:1
position: 706879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759145:1
position: 759145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706879-759145:1:exon

Wwtr1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Wwtr1
product: WW domain containing transcription regulator 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048334580.1
SIO_010081: Wwtr1
subclass of: SO_0000673
so part of: Wwtr1
location: join(706879..707072,708074..708548,743164..743303,751865..752052,756278..756408,757636..757748,758374..759145)
location: region:706879-759145:1
so has part: feature:706879-707072:1:exon
so has part: feature:708074-708548:1:exon
so has part: feature:743164-743303:1:exon
so has part: feature:751865-752052:1:exon
so has part: feature:756278-756408:1:exon
so has part: feature:757636-757748:1:exon
so has part: feature:758374-759145:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:706879-707072:1:exon

position:707072:1
position: 707072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:708074-708548:1:exon

position:708074:1
position: 708074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708548:1
position: 708548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:743164-743303:1:exon

position:743164:1
position: 743164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743303:1
position: 743303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:751865-752052:1:exon

position:751865:1
position: 751865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752052:1
position: 752052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:756278-756408:1:exon

position:756278:1
position: 756278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756408:1
position: 756408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:757636-757748:1:exon

position:757636:1
position: 757636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757748:1
position: 757748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:758374-759145:1:exon

position:758374:1
position: 758374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Wwtr1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Wwtr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WW domain-containing transcription regulator protein 1
translation: MNPSSAPPPGQQVIHVTQDLDTDLEALFNAVMNPRPSSWRKKILPESFFREPDSGAHSRQSSTDSSGGAPHAAPHAAPHAVLPGLPGPRPGGAQHVRSHSSPASLQPGAVAGPGAGGPGAQHAHLRQRSYDVTDLPEEPLPPGWEMTFTAAGQRYFLNHIEKITTWQDPRKTMTHHLNHASIHAAPATSTPVPQRAMATSQPNLVMAPQHQPPMVPGALGQQSPSAGLVAVPPALTTQQQQQQKLRLQRIQLERERIRMRQEELMRQEAALCRQLPVDAESLVAVPAVNAPAMNTDLRPITSSNSDPFLNGGPYHSREQSTDSGLGLGCYSLPTTPEDFLSHVDEMDTGETAGPAAMSAAPPQSRFPDFLDCLPGTNVDLGTLESEDLLPLFTDVESALSKSEPFLTWL
SIO_010081: Wwtr1
subclass of: SO_0000673
so part of: Wwtr1
location: join(708076..708548,743164..743303,751865..752052,756278..756408,757636..757748,758374..758558)
location: region:708076-758558:1
so has part: feature:708076-708548:1:exon
so has part: feature:743164-743303:1:exon
so has part: feature:751865-752052:1:exon
so has part: feature:756278-756408:1:exon
so has part: feature:757636-757748:1:exon
so has part: feature:758374-758558:1:exon

XP_048190537.1
type: Protein
SIO_000068: ncbiprotein

position:708076:1
position: 708076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758558:1
position: 758558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708076-708548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743164-743303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751865-752052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756278-756408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:757636-757748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758374-758558:1:exon

LOC125342428
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(756839..757707)
location: region:756839-757707:-1
so has part: feature:756839-757707:-1:exon
subclass of: SO_0000011

125342428
type: Gene
SIO_000068: ncbigene

position:756839:-1
position: 756839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757707:-1
position: 757707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:756839-757707:-1:exon

LOC125342428
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342428
product: uncharacterized LOC125342428
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007209222.1
SIO_010081: LOC125342428
subclass of: SO_0000673
so part of: LOC125342428
location: complement(join(756839..756977,757024..757078,757612..757707))
location: region:756839-757707:-1
so has part: feature:757612-757707:-1:exon
so has part: feature:757024-757078:-1:exon
so has part: feature:756839-756977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:757612-757707:-1:exon

position:757612:-1
position: 757612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:757024-757078:-1:exon

position:757024:-1
position: 757024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757078:-1
position: 757078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:756839-756977:-1:exon

position:756977:-1
position: 756977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tm4sf4
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tm4sf4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(762837..767849)
location: region:762837-767849:-1
so has part: feature:762837-767849:-1:exon
subclass of: SO_0000010

125342441
type: Gene
SIO_000068: ncbigene

position:762837:-1
position: 762837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767849:-1
position: 767849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762837-767849:-1:exon

Tm4sf4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tm4sf4
product: transmembrane 4 L six family member 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334596.1
SIO_010081: Tm4sf4
subclass of: SO_0000673
so part of: Tm4sf4
location: complement(join(762837..762877,762993..763173,765311..765447,766238..766347,767680..767849))
location: region:762837-767849:-1
so has part: feature:767680-767849:-1:exon
so has part: feature:766238-766347:-1:exon
so has part: feature:765311-765447:-1:exon
so has part: feature:762993-763173:-1:exon
so has part: feature:762837-762877:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:767680-767849:-1:exon

position:767680:-1
position: 767680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:766238-766347:-1:exon

position:766238:-1
position: 766238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766347:-1
position: 766347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:765311-765447:-1:exon

position:765311:-1
position: 765311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765447:-1
position: 765447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:762993-763173:-1:exon

position:762993:-1
position: 762993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763173:-1
position: 763173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:762837-762877:-1:exon

position:762877:-1
position: 762877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tm4sf4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tm4sf4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transmembrane 4 L6 family member 4
translation: MCTGSCARCLGIALVPLAVLGFLANVLLFFPGGKVMADNSNLSQEVWYFGGILGSGDDLPTPQMIFPALVFLGLKNNDCCGCCGNESCGKRFAMFTSIIFAVIGLVGAGYSFIISAVSINKGPKCLMDTKTWGYPFHDGDYLGDQALWKRCLEPPNVVPWNLTLFSILLVIGGVQIVLCAIQVINGLLGTLCGDCQCCGGEGAV
SIO_010081: Tm4sf4
subclass of: SO_0000673
so part of: Tm4sf4
location: complement(join(762860..762877,762993..763173,765311..765447,766238..766347,767680..767849))
location: region:762860-767849:-1
so has part: feature:767680-767849:-1:exon
so has part: feature:766238-766347:-1:exon
so has part: feature:765311-765447:-1:exon
so has part: feature:762993-763173:-1:exon
so has part: feature:762860-762877:-1:exon

XP_048190553.1
type: Protein
SIO_000068: ncbiprotein

position:762860:-1
position: 762860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:767680-767849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:766238-766347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:765311-765447:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:762993-763173:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:762860-762877:-1:exon

Tm4sf1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tm4sf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 791660..799556
location: region:791660-799556:1
so has part: feature:791660-799556:1:exon
subclass of: SO_0000010

125342492
type: Gene
SIO_000068: ncbigene

position:791660:1
position: 791660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799556:1
position: 799556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791660-799556:1:exon

Tm4sf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tm4sf1
product: transmembrane 4 L six family member 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334691.1
SIO_010081: Tm4sf1
subclass of: SO_0000673
so part of: Tm4sf1
location: join(791660..791934,793305..793385,793467..793612,796546..796726,798902..799556)
location: region:791660-799556:1
so has part: feature:791660-791934:1:exon
so has part: feature:793305-793385:1:exon
so has part: feature:793467-793612:1:exon
so has part: feature:796546-796726:1:exon
so has part: feature:798902-799556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:791660-791934:1:exon

position:791934:1
position: 791934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:793305-793385:1:exon

position:793305:1
position: 793305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793385:1
position: 793385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:793467-793612:1:exon

position:793467:1
position: 793467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793612:1
position: 793612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:796546-796726:1:exon

position:796546:1
position: 796546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796726:1
position: 796726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:798902-799556:1:exon

position:798902:1
position: 798902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tm4sf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tm4sf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 4 L6 family member 1
translation: MGRELPGFSPLPPALRPGASLGWRRRGEAVTMSDGRCARCVGHSLVWLATLCIVANILLYFPNGETKYASEHHLSRFVWFFSGLAGGGLLMLLPACVFIGLEDGDGCGCDDCGKGCATLSSVLAALIGIAGSGYCVIVAALGLAEGPLCADASGQWNYTFADTEGGYLMDSSTWSRCQEPEHVVEWNVTLFSLLLALGGIEFILCLIQVINGVFGGLCGYCCSRQQRYDC
SIO_010081: Tm4sf1
subclass of: SO_0000673
so part of: Tm4sf1
location: join(791665..791934,793305..793385,793467..793612,796546..796726,798902..798916)
location: region:791665-798916:1
so has part: feature:791665-791934:1:exon
so has part: feature:793305-793385:1:exon
so has part: feature:793467-793612:1:exon
so has part: feature:796546-796726:1:exon
so has part: feature:798902-798916:1:exon

XP_048190648.1
type: Protein
SIO_000068: ncbiprotein

position:791665:1
position: 791665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798916:1
position: 798916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791665-791934:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793305-793385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793467-793612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796546-796726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:798902-798916:1:exon

Tm4sf18
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tm4sf18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 795747..809652
location: region:795747-809652:1
so has part: feature:795747-809652:1:exon
subclass of: SO_0000010

125342493
type: Gene
SIO_000068: ncbigene

position:795747:1
position: 795747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809652:1
position: 809652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795747-809652:1:exon

Tm4sf18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tm4sf18
product: transmembrane 4 L six family member 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048334693.1
SIO_010081: Tm4sf18
subclass of: SO_0000673
so part of: Tm4sf18
location: join(795747..795751,804170..804366,806044..806133,807421..807563,808579..808759,809437..809652)
location: region:795747-809652:1
so has part: feature:795747-795751:1:exon
so has part: feature:804170-804366:1:exon
so has part: feature:806044-806133:1:exon
so has part: feature:807421-807563:1:exon
so has part: feature:808579-808759:1:exon
so has part: feature:809437-809652:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:795747-795751:1:exon

position:795751:1
position: 795751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:804170-804366:1:exon

position:804170:1
position: 804170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804366:1
position: 804366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:806044-806133:1:exon

position:806044:1
position: 806044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806133:1
position: 806133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:807421-807563:1:exon

position:807421:1
position: 807421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807563:1
position: 807563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:808579-808759:1:exon

position:808579:1
position: 808579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808759:1
position: 808759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:809437-809652:1:exon

position:809437:1
position: 809437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tm4sf18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tm4sf18
product: transmembrane 4 L six family member 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048334692.1
SIO_010081: Tm4sf18
subclass of: SO_0000673
so part of: Tm4sf18
location: join(803987..804033,804170..804366,806044..806133,807421..807563,808579..808759,809437..809652)
location: region:803987-809652:1
so has part: feature:803987-804033:1:exon
so has part: feature:804170-804366:1:exon
so has part: feature:806044-806133:1:exon
so has part: feature:807421-807563:1:exon
so has part: feature:808579-808759:1:exon
so has part: feature:809437-809652:1:exon

position:803987:1
position: 803987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803987-804033:1:exon

position:804033:1
position: 804033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:804170-804366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:806044-806133:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:807421-807563:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:808579-808759:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:809437-809652:1:exon

Tm4sf18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tm4sf18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 4 L6 family member 18
translation: MGSRRCQGCLSALLVPLALWSVIVNVLLYFPNGQAAYAAAAGAPGNHVWYFEGICFSGVLMLIVAAVLLVLDHDYNYRCCPSENCSEGYTTVLSVLFAALGVASAGYCLAISAAGLVQGPYCRTHGGWGYALEDTAGRFLTDSSVWSRCLEPAHVVEWNIVLFCSLITLSGLQVVVCLLRVAVQLSKVLCGAYTVVVQPGII
SIO_010081: Tm4sf18
subclass of: SO_0000673
so part of: Tm4sf18
location: join(804187..804366,806044..806133,807421..807563,808579..808759,809437..809451)
location: region:804187-809451:1
so has part: feature:804187-804366:1:exon
so has part: feature:806044-806133:1:exon
so has part: feature:807421-807563:1:exon
so has part: feature:808579-808759:1:exon
so has part: feature:809437-809451:1:exon

XP_048190649.1
type: Protein
SIO_000068: ncbiprotein

position:804187:1
position: 804187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809451:1
position: 809451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804187-804366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806044-806133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807421-807563:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:808579-808759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:809437-809451:1:exon

Tm4sf18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tm4sf18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 4 L6 family member 18
translation: MGSRRCQGCLSALLVPLALWSVIVNVLLYFPNGQAAYAAAAGAPGNHVWYFEGICFSGVLMLIVAAVLLVLDHDYNYRCCPSENCSEGYTTVLSVLFAALGVASAGYCLAISAAGLVQGPYCRTHGGWGYALEDTAGRFLTDSSVWSRCLEPAHVVEWNIVLFCSLITLSGLQVVVCLLRVAVQLSKVLCGAYTVVVQPGII
SIO_010081: Tm4sf18
subclass of: SO_0000673
so part of: Tm4sf18
location: join(804187..804366,806044..806133,807421..807563,808579..808759,809437..809451)
location: region:804187-809451:1
so has part: feature:804187-804366:1:exon
so has part: feature:806044-806133:1:exon
so has part: feature:807421-807563:1:exon
so has part: feature:808579-808759:1:exon
so has part: feature:809437-809451:1:exon

XP_048190650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:804187-804366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806044-806133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807421-807563:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:808579-808759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:809437-809451:1:exon

LOC125342486
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 811850..842348
location: region:811850-842348:1
so has part: feature:811850-842348:1:exon
subclass of: SO_0000010

125342486
type: Gene
SIO_000068: ncbigene

position:811850:1
position: 811850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842348:1
position: 842348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811850-842348:1:exon

LOC125342486
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342486
product: ceruloplasmin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048334676.1
SIO_010081: LOC125342486
subclass of: SO_0000673
so part of: LOC125342486
location: join(811850..812123,815329..815576,816372..816584,817354..817527,818158..818412,819568..819736,821132..821271,822764..822916,824239..824453,825383..825533,826852..827064,827352..827559,829007..829146,830272..830400,830980..831086,832504..832720,833103..833242,834162..834324,841866..842348)
location: region:811850-842348:1
so has part: feature:811850-812123:1:exon
so has part: feature:815329-815576:1:exon
so has part: feature:816372-816584:1:exon
so has part: feature:817354-817527:1:exon
so has part: feature:818158-818412:1:exon
so has part: feature:819568-819736:1:exon
so has part: feature:821132-821271:1:exon
so has part: feature:822764-822916:1:exon
so has part: feature:824239-824453:1:exon
so has part: feature:825383-825533:1:exon
so has part: feature:826852-827064:1:exon
so has part: feature:827352-827559:1:exon
so has part: feature:829007-829146:1:exon
so has part: feature:830272-830400:1:exon
so has part: feature:830980-831086:1:exon
so has part: feature:832504-832720:1:exon
so has part: feature:833103-833242:1:exon
so has part: feature:834162-834324:1:exon
so has part: feature:841866-842348:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:811850-812123:1:exon

position:812123:1
position: 812123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:815329-815576:1:exon

position:815329:1
position: 815329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815576:1
position: 815576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:816372-816584:1:exon

position:816372:1
position: 816372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816584:1
position: 816584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:817354-817527:1:exon

position:817354:1
position: 817354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817527:1
position: 817527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:818158-818412:1:exon

position:818158:1
position: 818158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818412:1
position: 818412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:819568-819736:1:exon

position:819568:1
position: 819568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819736:1
position: 819736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:821132-821271:1:exon

position:821132:1
position: 821132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821271:1
position: 821271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:822764-822916:1:exon

position:822764:1
position: 822764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822916:1
position: 822916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:824239-824453:1:exon

position:824239:1
position: 824239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824453:1
position: 824453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:825383-825533:1:exon

position:825383:1
position: 825383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825533:1
position: 825533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:826852-827064:1:exon

position:826852:1
position: 826852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827064:1
position: 827064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:827352-827559:1:exon

position:827352:1
position: 827352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827559:1
position: 827559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:829007-829146:1:exon

position:829007:1
position: 829007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829146:1
position: 829146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:830272-830400:1:exon

position:830272:1
position: 830272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830400:1
position: 830400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:830980-831086:1:exon

position:830980:1
position: 830980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831086:1
position: 831086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:832504-832720:1:exon

position:832504:1
position: 832504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832720:1
position: 832720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:833103-833242:1:exon

position:833103:1
position: 833103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833242:1
position: 833242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:834162-834324:1:exon

position:834162:1
position: 834162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834324:1
position: 834324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:841866-842348:1:exon

position:841866:1
position: 841866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342486
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342486
product: ceruloplasmin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048334679.1
SIO_010081: LOC125342486
subclass of: SO_0000673
so part of: LOC125342486
location: join(811850..812123,815329..815576,816372..816584,817354..817527,818158..818412,819568..819736,821132..821271,822764..822916,824239..824453,825383..825533,826852..827064,827352..827559,829007..829146,830272..830400,830980..831086,832504..832720,833103..833242,834162..834324,839662..840071)
location: region:811850-840071:1
so has part: feature:811850-812123:1:exon
so has part: feature:815329-815576:1:exon
so has part: feature:816372-816584:1:exon
so has part: feature:817354-817527:1:exon
so has part: feature:818158-818412:1:exon
so has part: feature:819568-819736:1:exon
so has part: feature:821132-821271:1:exon
so has part: feature:822764-822916:1:exon
so has part: feature:824239-824453:1:exon
so has part: feature:825383-825533:1:exon
so has part: feature:826852-827064:1:exon
so has part: feature:827352-827559:1:exon
so has part: feature:829007-829146:1:exon
so has part: feature:830272-830400:1:exon
so has part: feature:830980-831086:1:exon
so has part: feature:832504-832720:1:exon
so has part: feature:833103-833242:1:exon
so has part: feature:834162-834324:1:exon
so has part: feature:839662-840071:1:exon

position:840071:1
position: 840071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811850-812123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815329-815576:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:816372-816584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:817354-817527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818158-818412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:819568-819736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821132-821271:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:822764-822916:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824239-824453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825383-825533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:826852-827064:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:827352-827559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829007-829146:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:830272-830400:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:830980-831086:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:832504-832720:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:833103-833242:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:834162-834324:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:839662-840071:1:exon

position:839662:1
position: 839662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342486
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342486
product: ceruloplasmin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048334678.1
SIO_010081: LOC125342486
subclass of: SO_0000673
so part of: LOC125342486
location: join(811850..812123,815329..815576,816372..816584,817354..817527,818158..818412,819568..819736,821132..821271,822764..822916,824239..824453,825383..825533,826852..827064,827352..827559,829007..829146,830272..830400,830980..831086,832504..832720,833103..833242,834162..834324,836156..836775)
location: region:811850-836775:1
so has part: feature:811850-812123:1:exon
so has part: feature:815329-815576:1:exon
so has part: feature:816372-816584:1:exon
so has part: feature:817354-817527:1:exon
so has part: feature:818158-818412:1:exon
so has part: feature:819568-819736:1:exon
so has part: feature:821132-821271:1:exon
so has part: feature:822764-822916:1:exon
so has part: feature:824239-824453:1:exon
so has part: feature:825383-825533:1:exon
so has part: feature:826852-827064:1:exon
so has part: feature:827352-827559:1:exon
so has part: feature:829007-829146:1:exon
so has part: feature:830272-830400:1:exon
so has part: feature:830980-831086:1:exon
so has part: feature:832504-832720:1:exon
so has part: feature:833103-833242:1:exon
so has part: feature:834162-834324:1:exon
so has part: feature:836156-836775:1:exon

position:836775:1
position: 836775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811850-812123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815329-815576:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:816372-816584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:817354-817527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818158-818412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:819568-819736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821132-821271:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:822764-822916:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824239-824453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825383-825533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:826852-827064:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:827352-827559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829007-829146:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:830272-830400:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:830980-831086:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:832504-832720:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:833103-833242:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:834162-834324:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:836156-836775:1:exon

position:836156:1
position: 836156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342486
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342486
product: ceruloplasmin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048334677.1
SIO_010081: LOC125342486
subclass of: SO_0000673
so part of: LOC125342486
location: join(811850..812123,815329..815576,816372..816584,817354..817527,818158..818412,819568..819736,821132..821271,822764..822916,824239..824453,825383..825533,826852..827064,827352..827559,829007..829146,830272..830400,830980..831086,832504..832720,833103..833242,834162..834324,835030..835531)
location: region:811850-835531:1
so has part: feature:811850-812123:1:exon
so has part: feature:815329-815576:1:exon
so has part: feature:816372-816584:1:exon
so has part: feature:817354-817527:1:exon
so has part: feature:818158-818412:1:exon
so has part: feature:819568-819736:1:exon
so has part: feature:821132-821271:1:exon
so has part: feature:822764-822916:1:exon
so has part: feature:824239-824453:1:exon
so has part: feature:825383-825533:1:exon
so has part: feature:826852-827064:1:exon
so has part: feature:827352-827559:1:exon
so has part: feature:829007-829146:1:exon
so has part: feature:830272-830400:1:exon
so has part: feature:830980-831086:1:exon
so has part: feature:832504-832720:1:exon
so has part: feature:833103-833242:1:exon
so has part: feature:834162-834324:1:exon
so has part: feature:835030-835531:1:exon

position:835531:1
position: 835531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811850-812123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815329-815576:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:816372-816584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:817354-817527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818158-818412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:819568-819736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821132-821271:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:822764-822916:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824239-824453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825383-825533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:826852-827064:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:827352-827559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829007-829146:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:830272-830400:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:830980-831086:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:832504-832720:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:833103-833242:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:834162-834324:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:835030-835531:1:exon

position:835030:1
position: 835030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342486
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceruloplasmin isoform X1
translation: MKLWMLGVFLFLSNSTAWTKDKHYYIGIVETTWNYASDNREKTLISVNKEQSDVYLRSGPDRIGSTYKKALYIQYTDGHFRTTVDKPSWLGFLGPIIKVEVGDTVYVHLKNFASRPYTFHSHGVTYYKEHEGAIYPDNTTGTLKADDKVLPGEQYTYVLHANKEQSPGEGDANCVTRIYHSHIDAPKDIASGLIGPLILCKTGSLNQEKEKNIDQEFVVMFSVVDENLSWYLKDNIKTYCSEPEKVDTDSKDFQESNRMYSVNGHAFGSLPGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQVLTHKNYRTDTINLFPATLFEAFMVAQNPGTWMLSCQNLNHLKAGLQAFFQVQDCHKPSTEGKVQGKVRHYYIAAEEIIWSYAPSGVDAFTKENLTDPESDAGVFFEQGPTRIGGSYKKLVYREYTDASFLTRKVRGPDEEHLGVLGPLIWSEVGDVIKVTFSNKSPHPLSIEPTGVRFTKDNEGTYYAPRGTPLRGGAPPHPASHVAPQETFTYTWTVSEEVGPTYADPVCLAKMYYSAVDPTRDIFTGLIGPMKICKKGSLHENGRQKDVDKEFYLFPTVFDENESLLLDDNIKIFTATPDQVNKEDEDFQESNKMHSVNGFMYGNQPGLSMCQGDSVVWYLFSAGNEADIHGIYFSGNTFLSKGERRDAANLFPHASLTLLMQPDTPGTFDVLCLTTDHYTGGMKQKYTVSQCKQPSEGSPVYLGKQTYHVAAVEVEWDYSPHREWEKELHNLQGQSASNVFLDKEEFYIGSKYKKVVYRQYTDSSFKVPVERKAEEEHLGILGPLLHANIGDTVTIVFKNMATRPYSIHAHGVKTQSPTVVPTQPGEVHTYVWEIPERSGGGAEDAACIPWPYYSTVDRVKDLYSGLIGPLIVCRKHATAVFDPMRKLEFSLLFLVFDENESWYLDDNIQTYSNHPEKVKKDDDEFIESNKMHAINGRMFGNLQGLTMHVGDAVSWYLMGLGNEVDLHTVHFHGHSFRYKHRGIYSSDVFDVFPGTYQTLEMVPQTPGIWLLHCHVTDHIHAGMETTYTVLRSEASSQTYSRTRNINYSLLASMIILFQISTKEWLGK
SIO_010081: LOC125342486
subclass of: SO_0000673
so part of: LOC125342486
location: join(811978..812123,815329..815576,816372..816584,817354..817527,818158..818412,819568..819736,821132..821271,822764..822916,824239..824453,825383..825533,826852..827064,827352..827559,829007..829146,830272..830400,830980..831086,832504..832720,833103..833242,834162..834324,841866..841969)
location: region:811978-841969:1
so has part: feature:811978-812123:1:exon
so has part: feature:815329-815576:1:exon
so has part: feature:816372-816584:1:exon
so has part: feature:817354-817527:1:exon
so has part: feature:818158-818412:1:exon
so has part: feature:819568-819736:1:exon
so has part: feature:821132-821271:1:exon
so has part: feature:822764-822916:1:exon
so has part: feature:824239-824453:1:exon
so has part: feature:825383-825533:1:exon
so has part: feature:826852-827064:1:exon
so has part: feature:827352-827559:1:exon
so has part: feature:829007-829146:1:exon
so has part: feature:830272-830400:1:exon
so has part: feature:830980-831086:1:exon
so has part: feature:832504-832720:1:exon
so has part: feature:833103-833242:1:exon
so has part: feature:834162-834324:1:exon
so has part: feature:841866-841969:1:exon

XP_048190633.1
type: Protein
SIO_000068: ncbiprotein

position:811978:1
position: 811978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841969:1
position: 841969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811978-812123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815329-815576:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:816372-816584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:817354-817527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818158-818412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:819568-819736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821132-821271:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:822764-822916:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824239-824453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825383-825533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:826852-827064:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:827352-827559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829007-829146:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:830272-830400:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:830980-831086:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:832504-832720:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:833103-833242:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:834162-834324:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:841866-841969:1:exon

LOC125342486
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceruloplasmin isoform X4
translation: MKLWMLGVFLFLSNSTAWTKDKHYYIGIVETTWNYASDNREKTLISVNKEQSDVYLRSGPDRIGSTYKKALYIQYTDGHFRTTVDKPSWLGFLGPIIKVEVGDTVYVHLKNFASRPYTFHSHGVTYYKEHEGAIYPDNTTGTLKADDKVLPGEQYTYVLHANKEQSPGEGDANCVTRIYHSHIDAPKDIASGLIGPLILCKTGSLNQEKEKNIDQEFVVMFSVVDENLSWYLKDNIKTYCSEPEKVDTDSKDFQESNRMYSVNGHAFGSLPGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQVLTHKNYRTDTINLFPATLFEAFMVAQNPGTWMLSCQNLNHLKAGLQAFFQVQDCHKPSTEGKVQGKVRHYYIAAEEIIWSYAPSGVDAFTKENLTDPESDAGVFFEQGPTRIGGSYKKLVYREYTDASFLTRKVRGPDEEHLGVLGPLIWSEVGDVIKVTFSNKSPHPLSIEPTGVRFTKDNEGTYYAPRGTPLRGGAPPHPASHVAPQETFTYTWTVSEEVGPTYADPVCLAKMYYSAVDPTRDIFTGLIGPMKICKKGSLHENGRQKDVDKEFYLFPTVFDENESLLLDDNIKIFTATPDQVNKEDEDFQESNKMHSVNGFMYGNQPGLSMCQGDSVVWYLFSAGNEADIHGIYFSGNTFLSKGERRDAANLFPHASLTLLMQPDTPGTFDVLCLTTDHYTGGMKQKYTVSQCKQPSEGSPVYLGKQTYHVAAVEVEWDYSPHREWEKELHNLQGQSASNVFLDKEEFYIGSKYKKVVYRQYTDSSFKVPVERKAEEEHLGILGPLLHANIGDTVTIVFKNMATRPYSIHAHGVKTQSPTVVPTQPGEVHTYVWEIPERSGGGAEDAACIPWPYYSTVDRVKDLYSGLIGPLIVCRKHATAVFDPMRKLEFSLLFLVFDENESWYLDDNIQTYSNHPEKVKKDDDEFIESNKMHAINGRMFGNLQGLTMHVGDAVSWYLMGLGNEVDLHTVHFHGHSFRYKHRGIYSSDVFDVFPGTYQTLEMVPQTPGIWLLHCHVTDHIHAGMETTYTVLRSEGTMFQ
SIO_010081: LOC125342486
subclass of: SO_0000673
so part of: LOC125342486
location: join(811978..812123,815329..815576,816372..816584,817354..817527,818158..818412,819568..819736,821132..821271,822764..822916,824239..824453,825383..825533,826852..827064,827352..827559,829007..829146,830272..830400,830980..831086,832504..832720,833103..833242,834162..834324,839662..839678)
location: region:811978-839678:1
so has part: feature:811978-812123:1:exon
so has part: feature:815329-815576:1:exon
so has part: feature:816372-816584:1:exon
so has part: feature:817354-817527:1:exon
so has part: feature:818158-818412:1:exon
so has part: feature:819568-819736:1:exon
so has part: feature:821132-821271:1:exon
so has part: feature:822764-822916:1:exon
so has part: feature:824239-824453:1:exon
so has part: feature:825383-825533:1:exon
so has part: feature:826852-827064:1:exon
so has part: feature:827352-827559:1:exon
so has part: feature:829007-829146:1:exon
so has part: feature:830272-830400:1:exon
so has part: feature:830980-831086:1:exon
so has part: feature:832504-832720:1:exon
so has part: feature:833103-833242:1:exon
so has part: feature:834162-834324:1:exon
so has part: feature:839662-839678:1:exon

XP_048190636.1
type: Protein
SIO_000068: ncbiprotein

position:839678:1
position: 839678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811978-812123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815329-815576:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:816372-816584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:817354-817527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818158-818412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:819568-819736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821132-821271:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:822764-822916:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824239-824453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825383-825533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:826852-827064:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:827352-827559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829007-829146:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:830272-830400:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:830980-831086:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:832504-832720:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:833103-833242:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:834162-834324:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:839662-839678:1:exon

LOC125342486
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceruloplasmin isoform X3
translation: MKLWMLGVFLFLSNSTAWTKDKHYYIGIVETTWNYASDNREKTLISVNKEQSDVYLRSGPDRIGSTYKKALYIQYTDGHFRTTVDKPSWLGFLGPIIKVEVGDTVYVHLKNFASRPYTFHSHGVTYYKEHEGAIYPDNTTGTLKADDKVLPGEQYTYVLHANKEQSPGEGDANCVTRIYHSHIDAPKDIASGLIGPLILCKTGSLNQEKEKNIDQEFVVMFSVVDENLSWYLKDNIKTYCSEPEKVDTDSKDFQESNRMYSVNGHAFGSLPGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQVLTHKNYRTDTINLFPATLFEAFMVAQNPGTWMLSCQNLNHLKAGLQAFFQVQDCHKPSTEGKVQGKVRHYYIAAEEIIWSYAPSGVDAFTKENLTDPESDAGVFFEQGPTRIGGSYKKLVYREYTDASFLTRKVRGPDEEHLGVLGPLIWSEVGDVIKVTFSNKSPHPLSIEPTGVRFTKDNEGTYYAPRGTPLRGGAPPHPASHVAPQETFTYTWTVSEEVGPTYADPVCLAKMYYSAVDPTRDIFTGLIGPMKICKKGSLHENGRQKDVDKEFYLFPTVFDENESLLLDDNIKIFTATPDQVNKEDEDFQESNKMHSVNGFMYGNQPGLSMCQGDSVVWYLFSAGNEADIHGIYFSGNTFLSKGERRDAANLFPHASLTLLMQPDTPGTFDVLCLTTDHYTGGMKQKYTVSQCKQPSEGSPVYLGKQTYHVAAVEVEWDYSPHREWEKELHNLQGQSASNVFLDKEEFYIGSKYKKVVYRQYTDSSFKVPVERKAEEEHLGILGPLLHANIGDTVTIVFKNMATRPYSIHAHGVKTQSPTVVPTQPGEVHTYVWEIPERSGGGAEDAACIPWPYYSTVDRVKDLYSGLIGPLIVCRKHATAVFDPMRKLEFSLLFLVFDENESWYLDDNIQTYSNHPEKVKKDDDEFIESNKMHAINGRMFGNLQGLTMHVGDAVSWYLMGLGNEVDLHTVHFHGHSFRYKHRGIYSSDVFDVFPGTYQTLEMVPQTPGIWLLHCHVTDHIHAGMETTYTVLRSEALLQSAQQPVSV
SIO_010081: LOC125342486
subclass of: SO_0000673
so part of: LOC125342486
location: join(811978..812123,815329..815576,816372..816584,817354..817527,818158..818412,819568..819736,821132..821271,822764..822916,824239..824453,825383..825533,826852..827064,827352..827559,829007..829146,830272..830400,830980..831086,832504..832720,833103..833242,834162..834324,836156..836193)
location: region:811978-836193:1
so has part: feature:811978-812123:1:exon
so has part: feature:815329-815576:1:exon
so has part: feature:816372-816584:1:exon
so has part: feature:817354-817527:1:exon
so has part: feature:818158-818412:1:exon
so has part: feature:819568-819736:1:exon
so has part: feature:821132-821271:1:exon
so has part: feature:822764-822916:1:exon
so has part: feature:824239-824453:1:exon
so has part: feature:825383-825533:1:exon
so has part: feature:826852-827064:1:exon
so has part: feature:827352-827559:1:exon
so has part: feature:829007-829146:1:exon
so has part: feature:830272-830400:1:exon
so has part: feature:830980-831086:1:exon
so has part: feature:832504-832720:1:exon
so has part: feature:833103-833242:1:exon
so has part: feature:834162-834324:1:exon
so has part: feature:836156-836193:1:exon

XP_048190635.1
type: Protein
SIO_000068: ncbiprotein

position:836193:1
position: 836193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811978-812123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815329-815576:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:816372-816584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:817354-817527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818158-818412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:819568-819736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821132-821271:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:822764-822916:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824239-824453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825383-825533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:826852-827064:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:827352-827559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829007-829146:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:830272-830400:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:830980-831086:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:832504-832720:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:833103-833242:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:834162-834324:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:836156-836193:1:exon

LOC125342486
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceruloplasmin isoform X2
translation: MKLWMLGVFLFLSNSTAWTKDKHYYIGIVETTWNYASDNREKTLISVNKEQSDVYLRSGPDRIGSTYKKALYIQYTDGHFRTTVDKPSWLGFLGPIIKVEVGDTVYVHLKNFASRPYTFHSHGVTYYKEHEGAIYPDNTTGTLKADDKVLPGEQYTYVLHANKEQSPGEGDANCVTRIYHSHIDAPKDIASGLIGPLILCKTGSLNQEKEKNIDQEFVVMFSVVDENLSWYLKDNIKTYCSEPEKVDTDSKDFQESNRMYSVNGHAFGSLPGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQVLTHKNYRTDTINLFPATLFEAFMVAQNPGTWMLSCQNLNHLKAGLQAFFQVQDCHKPSTEGKVQGKVRHYYIAAEEIIWSYAPSGVDAFTKENLTDPESDAGVFFEQGPTRIGGSYKKLVYREYTDASFLTRKVRGPDEEHLGVLGPLIWSEVGDVIKVTFSNKSPHPLSIEPTGVRFTKDNEGTYYAPRGTPLRGGAPPHPASHVAPQETFTYTWTVSEEVGPTYADPVCLAKMYYSAVDPTRDIFTGLIGPMKICKKGSLHENGRQKDVDKEFYLFPTVFDENESLLLDDNIKIFTATPDQVNKEDEDFQESNKMHSVNGFMYGNQPGLSMCQGDSVVWYLFSAGNEADIHGIYFSGNTFLSKGERRDAANLFPHASLTLLMQPDTPGTFDVLCLTTDHYTGGMKQKYTVSQCKQPSEGSPVYLGKQTYHVAAVEVEWDYSPHREWEKELHNLQGQSASNVFLDKEEFYIGSKYKKVVYRQYTDSSFKVPVERKAEEEHLGILGPLLHANIGDTVTIVFKNMATRPYSIHAHGVKTQSPTVVPTQPGEVHTYVWEIPERSGGGAEDAACIPWPYYSTVDRVKDLYSGLIGPLIVCRKHATAVFDPMRKLEFSLLFLVFDENESWYLDDNIQTYSNHPEKVKKDDDEFIESNKMHAINGRMFGNLQGLTMHVGDAVSWYLMGLGNEVDLHTVHFHGHSFRYKHRGIYSSDVFDVFPGTYQTLEMVPQTPGIWLLHCHVTDHIHAGMETTYTVLRSEVRIVLTGNWQSQHKKTIQRISLCDFSFK
SIO_010081: LOC125342486
subclass of: SO_0000673
so part of: LOC125342486
location: join(811978..812123,815329..815576,816372..816584,817354..817527,818158..818412,819568..819736,821132..821271,822764..822916,824239..824453,825383..825533,826852..827064,827352..827559,829007..829146,830272..830400,830980..831086,832504..832720,833103..833242,834162..834324,835030..835115)
location: region:811978-835115:1
so has part: feature:811978-812123:1:exon
so has part: feature:815329-815576:1:exon
so has part: feature:816372-816584:1:exon
so has part: feature:817354-817527:1:exon
so has part: feature:818158-818412:1:exon
so has part: feature:819568-819736:1:exon
so has part: feature:821132-821271:1:exon
so has part: feature:822764-822916:1:exon
so has part: feature:824239-824453:1:exon
so has part: feature:825383-825533:1:exon
so has part: feature:826852-827064:1:exon
so has part: feature:827352-827559:1:exon
so has part: feature:829007-829146:1:exon
so has part: feature:830272-830400:1:exon
so has part: feature:830980-831086:1:exon
so has part: feature:832504-832720:1:exon
so has part: feature:833103-833242:1:exon
so has part: feature:834162-834324:1:exon
so has part: feature:835030-835115:1:exon

XP_048190634.1
type: Protein
SIO_000068: ncbiprotein

position:835115:1
position: 835115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811978-812123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815329-815576:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:816372-816584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:817354-817527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818158-818412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:819568-819736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821132-821271:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:822764-822916:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824239-824453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825383-825533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:826852-827064:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:827352-827559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829007-829146:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:830272-830400:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:830980-831086:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:832504-832720:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:833103-833242:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:834162-834324:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:835030-835115:1:exon

Hps3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Hps3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(837832..857046)
location: region:837832-857046:-1
so has part: feature:837832-857046:-1:exon
subclass of: SO_0000010

125342490
type: Gene
SIO_000068: ncbigene

position:837832:-1
position: 837832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857046:-1
position: 857046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:837832-857046:-1:exon

Hps3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hps3
product: HPS3 biogenesis of lysosomal organelles complex 2 subunit 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334688.1
SIO_010081: Hps3
subclass of: SO_0000673
so part of: Hps3
location: complement(join(837832..838602,840078..840168,840698..840904,842470..842574,843388..843576,844127..844312,845376..845609,846411..846588,847375..847556,848399..848507,848770..848924,851025..851106,852610..852799,853478..853563,853662..853833,854569..855060,856806..857046))
location: region:837832-857046:-1
so has part: feature:856806-857046:-1:exon
so has part: feature:854569-855060:-1:exon
so has part: feature:853662-853833:-1:exon
so has part: feature:853478-853563:-1:exon
so has part: feature:852610-852799:-1:exon
so has part: feature:851025-851106:-1:exon
so has part: feature:848770-848924:-1:exon
so has part: feature:848399-848507:-1:exon
so has part: feature:847375-847556:-1:exon
so has part: feature:846411-846588:-1:exon
so has part: feature:845376-845609:-1:exon
so has part: feature:844127-844312:-1:exon
so has part: feature:843388-843576:-1:exon
so has part: feature:842470-842574:-1:exon
so has part: feature:840698-840904:-1:exon
so has part: feature:840078-840168:-1:exon
so has part: feature:837832-838602:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:856806-857046:-1:exon

position:856806:-1
position: 856806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:854569-855060:-1:exon

position:854569:-1
position: 854569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855060:-1
position: 855060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:853662-853833:-1:exon

position:853662:-1
position: 853662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853833:-1
position: 853833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:853478-853563:-1:exon

position:853478:-1
position: 853478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853563:-1
position: 853563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:852610-852799:-1:exon

position:852610:-1
position: 852610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852799:-1
position: 852799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:851025-851106:-1:exon

position:851025:-1
position: 851025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851106:-1
position: 851106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:848770-848924:-1:exon

position:848770:-1
position: 848770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848924:-1
position: 848924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:848399-848507:-1:exon

position:848399:-1
position: 848399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848507:-1
position: 848507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:847375-847556:-1:exon

position:847375:-1
position: 847375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847556:-1
position: 847556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:846411-846588:-1:exon

position:846411:-1
position: 846411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846588:-1
position: 846588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:845376-845609:-1:exon

position:845376:-1
position: 845376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845609:-1
position: 845609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:844127-844312:-1:exon

position:844127:-1
position: 844127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844312:-1
position: 844312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:843388-843576:-1:exon

position:843388:-1
position: 843388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843576:-1
position: 843576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:842470-842574:-1:exon

position:842470:-1
position: 842470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842574:-1
position: 842574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:840698-840904:-1:exon

position:840698:-1
position: 840698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840904:-1
position: 840904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:840078-840168:-1:exon

position:840078:-1
position: 840078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840168:-1
position: 840168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:837832-838602:-1:exon

position:838602:-1
position: 838602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hps3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 214514
gene: Hps3
product: HPS3 biogenesis of lysosomal organelles complex 2 subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_007209229.1
SIO_010081: Hps3
so part of: Hps3
location: complement(join(838467..838602,840078..840172,840698..840904,842470..842574,843388..843576,844127..844312,845376..845609,846411..846588,847375..847556,848399..848507,848770..848924,851025..851106,852610..852799,853478..853563,853662..853833,854569..855060,856806..857046))
location: region:838467-857046:-1
so has part: feature:856806-857046:-1:exon
so has part: feature:854569-855060:-1:exon
so has part: feature:853662-853833:-1:exon
so has part: feature:853478-853563:-1:exon
so has part: feature:852610-852799:-1:exon
so has part: feature:851025-851106:-1:exon
so has part: feature:848770-848924:-1:exon
so has part: feature:848399-848507:-1:exon
so has part: feature:847375-847556:-1:exon
so has part: feature:846411-846588:-1:exon
so has part: feature:845376-845609:-1:exon
so has part: feature:844127-844312:-1:exon
so has part: feature:843388-843576:-1:exon
so has part: feature:842470-842574:-1:exon
so has part: feature:840698-840904:-1:exon
so has part: feature:840078-840172:-1:exon
so has part: feature:838467-838602:-1:exon

position:838467:-1
position: 838467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856806-857046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854569-855060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:853662-853833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:853478-853563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:852610-852799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851025-851106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:848770-848924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:848399-848507:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:847375-847556:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:846411-846588:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:845376-845609:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:844127-844312:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:843388-843576:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:842470-842574:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:840698-840904:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:840078-840172:-1:exon

position:840172:-1
position: 840172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:838467-838602:-1:exon

Hps3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hps3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Hermansky-Pudlak syndrome 3 protein isoform X1
translation: MVRLYNLHPFGSQQVVPCTLEPERLCCGGRDALFVAAGCRVEAFAVAGQELCRPRCAFSTLGAVRRLAYSEPGDYLVMIEEKNGGTFVRAYANWRRKRSESSRVCVRMVGHGVVAPISEAFRDQMSIVEIPLSEVPLCISCCPVKGDLLVGCTNQFVLFTLKYQDVSEEFSVLDFERSLVIHINSITPVEISFCLGYVAVMSDLEVLILKLESGPKNGERVNHHPHRTSKPVNQAEGLSNETSQLESDDFVFCQKPTELLGERSRLSGMSVTLESIGLAEDKAKYPHIQHLLYRRFTPDISFYASSDDIKLHSLQLLPIYQAGSPSDGEKLSPEKELLSLFCFFSLPHAGYLYMVVKSVELMSVYQYPEKAQQAVLTPQFLHVITSNNLQCFTVRCSAAVAREDDPYMDTTLKACPPVSMEVCALRLQLFIGLKAICHFKNHIILLTKADPEATEERRESPRRTPSRKTASVQMRTPPGAGAGWNVYIVNTVPPVQLYKEMVDYSNTYKTVRTQSCIHLLSEAHLLVRAALMDTQQLEPGERAELMEAFKESCGHLGDCYSRLATQHAHLALPYYKMSSLSLAEVLARVDWAGGESQNYERGLIFYINHSLYENLDEELCGELAARVAEMFRVAEPKQLPHILCSPSMKNIDPSLAWSYLRGLDACGFSSVLVTLTRAAVALKLGDLELYQKEIQSHSEMRLVCGFILEPRLLIQQRKGQIVPTELAAHLKETQPGLLVAAILGLQKNNKIGIEEADAFFKVLCGRSEDLTPQLLVDFWEAQLASCLPDVVLQELCFKLTSQYIWRLSKRQLPDTTPLRTAEDLMNACSHYGLIYPWVHVLPPDSLTDKNYKEDLSKLQSLICGPSFDIASIVPFLEPLSEDTSAGLSIHILCHTRLKEYEHCLDTLLNRCPEAVIPYANHELKDEHRTLWWKKLLPELCQRVKCGGEKFQLHLASLKEALSVIAVELELREFLNVLPEDGAATFFLPYLLYCSRKKSLT
SIO_010081: Hps3
subclass of: SO_0000673
so part of: Hps3
location: complement(join(838475..838602,840078..840168,840698..840904,842470..842574,843388..843576,844127..844312,845376..845609,846411..846588,847375..847556,848399..848507,848770..848924,851025..851106,852610..852799,853478..853563,853662..853833,854569..855060,856806..857022))
location: region:838475-857022:-1
so has part: feature:856806-857022:-1:exon
so has part: feature:854569-855060:-1:exon
so has part: feature:853662-853833:-1:exon
so has part: feature:853478-853563:-1:exon
so has part: feature:852610-852799:-1:exon
so has part: feature:851025-851106:-1:exon
so has part: feature:848770-848924:-1:exon
so has part: feature:848399-848507:-1:exon
so has part: feature:847375-847556:-1:exon
so has part: feature:846411-846588:-1:exon
so has part: feature:845376-845609:-1:exon
so has part: feature:844127-844312:-1:exon
so has part: feature:843388-843576:-1:exon
so has part: feature:842470-842574:-1:exon
so has part: feature:840698-840904:-1:exon
so has part: feature:840078-840168:-1:exon
so has part: feature:838475-838602:-1:exon

XP_048190645.1
type: Protein
SIO_000068: ncbiprotein

position:838475:-1
position: 838475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857022:-1
position: 857022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856806-857022:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854569-855060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:853662-853833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:853478-853563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:852610-852799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851025-851106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:848770-848924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:848399-848507:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:847375-847556:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:846411-846588:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:845376-845609:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:844127-844312:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:843388-843576:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:842470-842574:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:840698-840904:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:840078-840168:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:838475-838602:-1:exon

Hps3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hps3
product: HPS3 biogenesis of lysosomal organelles complex 2 subunit 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048334689.1
SIO_010081: Hps3
subclass of: SO_0000673
so part of: Hps3
location: complement(join(843599..843894,844111..844312,845376..845609,846411..846588,847375..847556,848399..848507,848770..848924,851025..851106,852610..852799,853478..853563,853662..853833,854569..855060,856806..857046))
location: region:843599-857046:-1
so has part: feature:856806-857046:-1:exon
so has part: feature:854569-855060:-1:exon
so has part: feature:853662-853833:-1:exon
so has part: feature:853478-853563:-1:exon
so has part: feature:852610-852799:-1:exon
so has part: feature:851025-851106:-1:exon
so has part: feature:848770-848924:-1:exon
so has part: feature:848399-848507:-1:exon
so has part: feature:847375-847556:-1:exon
so has part: feature:846411-846588:-1:exon
so has part: feature:845376-845609:-1:exon
so has part: feature:844111-844312:-1:exon
so has part: feature:843599-843894:-1:exon

position:843599:-1
position: 843599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856806-857046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854569-855060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:853662-853833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:853478-853563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:852610-852799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851025-851106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:848770-848924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:848399-848507:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:847375-847556:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:846411-846588:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:845376-845609:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:844111-844312:-1:exon

position:844111:-1
position: 844111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:843599-843894:-1:exon

position:843894:-1
position: 843894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hps3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hps3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Hermansky-Pudlak syndrome 3 protein isoform X2
translation: MVRLYNLHPFGSQQVVPCTLEPERLCCGGRDALFVAAGCRVEAFAVAGQELCRPRCAFSTLGAVRRLAYSEPGDYLVMIEEKNGGTFVRAYANWRRKRSESSRVCVRMVGHGVVAPISEAFRDQMSIVEIPLSEVPLCISCCPVKGDLLVGCTNQFVLFTLKYQDVSEEFSVLDFERSLVIHINSITPVEISFCLGYVAVMSDLEVLILKLESGPKNGERVNHHPHRTSKPVNQAEGLSNETSQLESDDFVFCQKPTELLGERSRLSGMSVTLESIGLAEDKAKYPHIQHLLYRRFTPDISFYASSDDIKLHSLQLLPIYQAGSPSDGEKLSPEKELLSLFCFFSLPHAGYLYMVVKSVELMSVYQYPEKAQQAVLTPQFLHVITSNNLQCFTVRCSAAVAREDDPYMDTTLKACPPVSMEVCALRLQLFIGLKAICHFKNHIILLTKADPEATEERRESPRRTPSRKTASVQMRTPPGAGAGWNVYIVNTVPPVQLYKEMVDYSNTYKTVRTQSCIHLLSEAHLLVRAALMDTQQLEPGERAELMEAFKESCGHLGDCYSRLATQHAHLALPYYKMSSLSLAEVLARVDWAGGESQNYERGLIFYINHSLYENLDEELCGELAARVAEMFRVAEPKQLPHILCSPSMKNIDPSLAWSYLRGLDACGFSSVLVTLTRAAVALKLGDLELYQKEIQSHSEMRLVCGFILEPRLLIQQRKGQIVPTELAAHLKETQPGLLVAAILGLQKNNKIGIEEADAFFKVCHCKKM
SIO_010081: Hps3
subclass of: SO_0000673
so part of: Hps3
location: complement(join(843887..843894,844111..844312,845376..845609,846411..846588,847375..847556,848399..848507,848770..848924,851025..851106,852610..852799,853478..853563,853662..853833,854569..855060,856806..857022))
location: region:843887-857022:-1
so has part: feature:856806-857022:-1:exon
so has part: feature:854569-855060:-1:exon
so has part: feature:853662-853833:-1:exon
so has part: feature:853478-853563:-1:exon
so has part: feature:852610-852799:-1:exon
so has part: feature:851025-851106:-1:exon
so has part: feature:848770-848924:-1:exon
so has part: feature:848399-848507:-1:exon
so has part: feature:847375-847556:-1:exon
so has part: feature:846411-846588:-1:exon
so has part: feature:845376-845609:-1:exon
so has part: feature:844111-844312:-1:exon
so has part: feature:843887-843894:-1:exon

XP_048190646.1
type: Protein
SIO_000068: ncbiprotein

position:843887:-1
position: 843887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856806-857022:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854569-855060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:853662-853833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:853478-853563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:852610-852799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851025-851106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:848770-848924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:848399-848507:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:847375-847556:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:846411-846588:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:845376-845609:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:844111-844312:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:843887-843894:-1:exon

Hltf
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Hltf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 867337..900146
location: region:867337-900146:1
so has part: feature:867337-900146:1:exon
subclass of: SO_0000010

125342487
type: Gene
SIO_000068: ncbigene

position:867337:1
position: 867337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900146:1
position: 900146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867337-900146:1:exon

Hltf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hltf
product: helicase like transcription factor, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334680.1
SIO_010081: Hltf
subclass of: SO_0000673
so part of: Hltf
location: join(867337..867516,868722..868929,870182..870348,872029..872162,873196..873293,875203..875277,875439..875630,878343..878438,879132..879225,880415..880508,881865..881944,882036..882080,882577..882666,883823..883920,884882..885025,885911..886049,886986..887121,887698..887877,890315..890439,891313..891503,892793..892918,893326..893438,893763..893943,895131..895211,898020..898191,899018..900146)
location: region:867337-900146:1
so has part: feature:867337-867516:1:exon
so has part: feature:868722-868929:1:exon
so has part: feature:870182-870348:1:exon
so has part: feature:872029-872162:1:exon
so has part: feature:873196-873293:1:exon
so has part: feature:875203-875277:1:exon
so has part: feature:875439-875630:1:exon
so has part: feature:878343-878438:1:exon
so has part: feature:879132-879225:1:exon
so has part: feature:880415-880508:1:exon
so has part: feature:881865-881944:1:exon
so has part: feature:882036-882080:1:exon
so has part: feature:882577-882666:1:exon
so has part: feature:883823-883920:1:exon
so has part: feature:884882-885025:1:exon
so has part: feature:885911-886049:1:exon
so has part: feature:886986-887121:1:exon
so has part: feature:887698-887877:1:exon
so has part: feature:890315-890439:1:exon
so has part: feature:891313-891503:1:exon
so has part: feature:892793-892918:1:exon
so has part: feature:893326-893438:1:exon
so has part: feature:893763-893943:1:exon
so has part: feature:895131-895211:1:exon
so has part: feature:898020-898191:1:exon
so has part: feature:899018-900146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867337-867516:1:exon

position:867516:1
position: 867516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:868722-868929:1:exon

position:868722:1
position: 868722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868929:1
position: 868929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:870182-870348:1:exon

position:870182:1
position: 870182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870348:1
position: 870348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:872029-872162:1:exon

position:872029:1
position: 872029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872162:1
position: 872162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:873196-873293:1:exon

position:873196:1
position: 873196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873293:1
position: 873293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:875203-875277:1:exon

position:875203:1
position: 875203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875277:1
position: 875277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:875439-875630:1:exon

position:875439:1
position: 875439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875630:1
position: 875630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:878343-878438:1:exon

position:878343:1
position: 878343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878438:1
position: 878438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:879132-879225:1:exon

position:879132:1
position: 879132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879225:1
position: 879225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:880415-880508:1:exon

position:880415:1
position: 880415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880508:1
position: 880508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:881865-881944:1:exon

position:881865:1
position: 881865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881944:1
position: 881944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:882036-882080:1:exon

position:882036:1
position: 882036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882080:1
position: 882080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:882577-882666:1:exon

position:882577:1
position: 882577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882666:1
position: 882666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:883823-883920:1:exon

position:883823:1
position: 883823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883920:1
position: 883920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:884882-885025:1:exon

position:884882:1
position: 884882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885025:1
position: 885025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:885911-886049:1:exon

position:885911:1
position: 885911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886049:1
position: 886049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:886986-887121:1:exon

position:886986:1
position: 886986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887121:1
position: 887121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:887698-887877:1:exon

position:887698:1
position: 887698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887877:1
position: 887877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:890315-890439:1:exon

position:890315:1
position: 890315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890439:1
position: 890439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:891313-891503:1:exon

position:891313:1
position: 891313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891503:1
position: 891503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:892793-892918:1:exon

position:892793:1
position: 892793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892918:1
position: 892918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:893326-893438:1:exon

position:893326:1
position: 893326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893438:1
position: 893438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:893763-893943:1:exon

position:893763:1
position: 893763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893943:1
position: 893943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:895131-895211:1:exon

position:895131:1
position: 895131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895211:1
position: 895211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:898020-898191:1:exon

position:898020:1
position: 898020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898191:1
position: 898191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:899018-900146:1:exon

position:899018:1
position: 899018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Hltf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hltf
product: helicase like transcription factor, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334684.1
SIO_010081: Hltf
subclass of: SO_0000673
so part of: Hltf
location: join(867337..867516,868722..868929,870182..870348,872029..872162,873196..873293,875203..875277,875439..875630,878343..878438,879132..879225,880415..880508,881865..881944,882036..882080,882577..882666,883823..883920,884882..885025,885911..886049,886986..887121,887698..887877,890315..890439,891325..891503,892793..892918,893326..893438,893763..893943,895131..895211,898020..898191,899018..900146)
location: region:867337-900146:1
so has part: feature:867337-867516:1:exon
so has part: feature:868722-868929:1:exon
so has part: feature:870182-870348:1:exon
so has part: feature:872029-872162:1:exon
so has part: feature:873196-873293:1:exon
so has part: feature:875203-875277:1:exon
so has part: feature:875439-875630:1:exon
so has part: feature:878343-878438:1:exon
so has part: feature:879132-879225:1:exon
so has part: feature:880415-880508:1:exon
so has part: feature:881865-881944:1:exon
so has part: feature:882036-882080:1:exon
so has part: feature:882577-882666:1:exon
so has part: feature:883823-883920:1:exon
so has part: feature:884882-885025:1:exon
so has part: feature:885911-886049:1:exon
so has part: feature:886986-887121:1:exon
so has part: feature:887698-887877:1:exon
so has part: feature:890315-890439:1:exon
so has part: feature:891325-891503:1:exon
so has part: feature:892793-892918:1:exon
so has part: feature:893326-893438:1:exon
so has part: feature:893763-893943:1:exon
so has part: feature:895131-895211:1:exon
so has part: feature:898020-898191:1:exon
so has part: feature:899018-900146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867337-867516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868722-868929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870182-870348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:872029-872162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873196-873293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875203-875277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875439-875630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878343-878438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879132-879225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880415-880508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881865-881944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:882036-882080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:882577-882666:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:883823-883920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884882-885025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885911-886049:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:886986-887121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:887698-887877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:890315-890439:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:891325-891503:1:exon

position:891325:1
position: 891325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:892793-892918:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:893326-893438:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:893763-893943:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:895131-895211:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:898020-898191:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:899018-900146:1:exon

Hltf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hltf
product: helicase like transcription factor, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334683.1
SIO_010081: Hltf
subclass of: SO_0000673
so part of: Hltf
location: join(867337..867516,868722..868929,870182..870348,872029..872162,873196..873293,875203..875277,875439..875630,878343..878438,879132..879225,880415..880508,881865..881944,882036..882080,882580..882666,883823..883920,884882..885025,885911..886049,886986..887121,887698..887877,890315..890439,891313..891503,892793..892918,893326..893438,893763..893943,895131..895211,898020..898191,899018..900146)
location: region:867337-900146:1
so has part: feature:867337-867516:1:exon
so has part: feature:868722-868929:1:exon
so has part: feature:870182-870348:1:exon
so has part: feature:872029-872162:1:exon
so has part: feature:873196-873293:1:exon
so has part: feature:875203-875277:1:exon
so has part: feature:875439-875630:1:exon
so has part: feature:878343-878438:1:exon
so has part: feature:879132-879225:1:exon
so has part: feature:880415-880508:1:exon
so has part: feature:881865-881944:1:exon
so has part: feature:882036-882080:1:exon
so has part: feature:882580-882666:1:exon
so has part: feature:883823-883920:1:exon
so has part: feature:884882-885025:1:exon
so has part: feature:885911-886049:1:exon
so has part: feature:886986-887121:1:exon
so has part: feature:887698-887877:1:exon
so has part: feature:890315-890439:1:exon
so has part: feature:891313-891503:1:exon
so has part: feature:892793-892918:1:exon
so has part: feature:893326-893438:1:exon
so has part: feature:893763-893943:1:exon
so has part: feature:895131-895211:1:exon
so has part: feature:898020-898191:1:exon
so has part: feature:899018-900146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867337-867516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868722-868929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870182-870348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:872029-872162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873196-873293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875203-875277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875439-875630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878343-878438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879132-879225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880415-880508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881865-881944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:882036-882080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:882580-882666:1:exon

position:882580:1
position: 882580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:883823-883920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884882-885025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885911-886049:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:886986-887121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:887698-887877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:890315-890439:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:891313-891503:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:892793-892918:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:893326-893438:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:893763-893943:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:895131-895211:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:898020-898191:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:899018-900146:1:exon

Hltf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hltf
product: helicase like transcription factor, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334682.1
SIO_010081: Hltf
subclass of: SO_0000673
so part of: Hltf
location: join(867337..867516,868722..868929,870182..870348,872029..872162,873196..873293,875203..875277,875439..875630,878343..878438,879132..879225,880418..880508,881865..881944,882036..882080,882577..882666,883823..883920,884882..885025,885911..886049,886986..887121,887698..887877,890315..890439,891313..891503,892793..892918,893326..893438,893763..893943,895131..895211,898020..898191,899018..900146)
location: region:867337-900146:1
so has part: feature:867337-867516:1:exon
so has part: feature:868722-868929:1:exon
so has part: feature:870182-870348:1:exon
so has part: feature:872029-872162:1:exon
so has part: feature:873196-873293:1:exon
so has part: feature:875203-875277:1:exon
so has part: feature:875439-875630:1:exon
so has part: feature:878343-878438:1:exon
so has part: feature:879132-879225:1:exon
so has part: feature:880418-880508:1:exon
so has part: feature:881865-881944:1:exon
so has part: feature:882036-882080:1:exon
so has part: feature:882577-882666:1:exon
so has part: feature:883823-883920:1:exon
so has part: feature:884882-885025:1:exon
so has part: feature:885911-886049:1:exon
so has part: feature:886986-887121:1:exon
so has part: feature:887698-887877:1:exon
so has part: feature:890315-890439:1:exon
so has part: feature:891313-891503:1:exon
so has part: feature:892793-892918:1:exon
so has part: feature:893326-893438:1:exon
so has part: feature:893763-893943:1:exon
so has part: feature:895131-895211:1:exon
so has part: feature:898020-898191:1:exon
so has part: feature:899018-900146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867337-867516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868722-868929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870182-870348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:872029-872162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873196-873293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875203-875277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875439-875630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878343-878438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879132-879225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880418-880508:1:exon

position:880418:1
position: 880418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:881865-881944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:882036-882080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:882577-882666:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:883823-883920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884882-885025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885911-886049:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:886986-887121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:887698-887877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:890315-890439:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:891313-891503:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:892793-892918:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:893326-893438:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:893763-893943:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:895131-895211:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:898020-898191:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:899018-900146:1:exon

Hltf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hltf
product: helicase like transcription factor, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334685.1
SIO_010081: Hltf
subclass of: SO_0000673
so part of: Hltf
location: join(867337..867516,868722..868929,870182..870348,872029..872162,873196..873293,875203..875277,875439..875630,878343..878438,879132..879225,880418..880508,881865..881944,882036..882080,882577..882666,883823..883920,884882..885025,885911..886049,886986..887121,887698..887877,890315..890439,891325..891503,892793..892918,893326..893438,893763..893943,895131..895211,898020..898191,899018..900146)
location: region:867337-900146:1
so has part: feature:867337-867516:1:exon
so has part: feature:868722-868929:1:exon
so has part: feature:870182-870348:1:exon
so has part: feature:872029-872162:1:exon
so has part: feature:873196-873293:1:exon
so has part: feature:875203-875277:1:exon
so has part: feature:875439-875630:1:exon
so has part: feature:878343-878438:1:exon
so has part: feature:879132-879225:1:exon
so has part: feature:880418-880508:1:exon
so has part: feature:881865-881944:1:exon
so has part: feature:882036-882080:1:exon
so has part: feature:882577-882666:1:exon
so has part: feature:883823-883920:1:exon
so has part: feature:884882-885025:1:exon
so has part: feature:885911-886049:1:exon
so has part: feature:886986-887121:1:exon
so has part: feature:887698-887877:1:exon
so has part: feature:890315-890439:1:exon
so has part: feature:891325-891503:1:exon
so has part: feature:892793-892918:1:exon
so has part: feature:893326-893438:1:exon
so has part: feature:893763-893943:1:exon
so has part: feature:895131-895211:1:exon
so has part: feature:898020-898191:1:exon
so has part: feature:899018-900146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867337-867516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868722-868929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870182-870348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:872029-872162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873196-873293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875203-875277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875439-875630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878343-878438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879132-879225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880418-880508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881865-881944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:882036-882080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:882577-882666:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:883823-883920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884882-885025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885911-886049:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:886986-887121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:887698-887877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:890315-890439:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:891325-891503:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:892793-892918:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:893326-893438:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:893763-893943:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:895131-895211:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:898020-898191:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:899018-900146:1:exon

Hltf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hltf
product: helicase like transcription factor, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334686.1
SIO_010081: Hltf
subclass of: SO_0000673
so part of: Hltf
location: join(867337..867516,868722..868929,870182..870348,872029..872162,873196..873293,875203..875277,875439..875630,878343..878438,879132..879225,880418..880508,881865..881944,882036..882080,882580..882666,883823..883920,884882..885025,885911..886049,886986..887121,887698..887877,890315..890439,891325..891503,892793..892918,893326..893438,893763..893943,895131..895211,898020..898191,899018..900146)
location: region:867337-900146:1
so has part: feature:867337-867516:1:exon
so has part: feature:868722-868929:1:exon
so has part: feature:870182-870348:1:exon
so has part: feature:872029-872162:1:exon
so has part: feature:873196-873293:1:exon
so has part: feature:875203-875277:1:exon
so has part: feature:875439-875630:1:exon
so has part: feature:878343-878438:1:exon
so has part: feature:879132-879225:1:exon
so has part: feature:880418-880508:1:exon
so has part: feature:881865-881944:1:exon
so has part: feature:882036-882080:1:exon
so has part: feature:882580-882666:1:exon
so has part: feature:883823-883920:1:exon
so has part: feature:884882-885025:1:exon
so has part: feature:885911-886049:1:exon
so has part: feature:886986-887121:1:exon
so has part: feature:887698-887877:1:exon
so has part: feature:890315-890439:1:exon
so has part: feature:891325-891503:1:exon
so has part: feature:892793-892918:1:exon
so has part: feature:893326-893438:1:exon
so has part: feature:893763-893943:1:exon
so has part: feature:895131-895211:1:exon
so has part: feature:898020-898191:1:exon
so has part: feature:899018-900146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867337-867516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868722-868929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870182-870348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:872029-872162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873196-873293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875203-875277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875439-875630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878343-878438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879132-879225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880418-880508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881865-881944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:882036-882080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:882580-882666:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:883823-883920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884882-885025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885911-886049:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:886986-887121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:887698-887877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:890315-890439:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:891325-891503:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:892793-892918:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:893326-893438:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:893763-893943:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:895131-895211:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:898020-898191:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:899018-900146:1:exon

Hltf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hltf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase-like transcription factor isoform X1
translation: MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLFGTLRGHVVGLRYYTGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHLKKDLAAALASIMDNKLAQVEGVVPFGANNAFTMPLHMTFWGKEENRKAVLDQLKKHGFKLGPAPKTLGFSLESGWNSGRAGPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTHEMEPAEAVETPLLPHQKQALSWMISRENSKDLPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIAVILTNFHDGSPLPVERVKKNQQKKEHKDCTLNSTPSTPVKLGRSCTSGEADGLSKVEGPRCSEEPSVSNIKKKKQPMSESSSSRPKRRKTAVQYIESSDSEEAETSELPQKMKGKLKNVQSETRSRAKAGSSKVKEDVAFACALTSSTPATKKKMLKKGGSAVVGSKKSEIEERPRTTLIICPLSVLSNWIDQFGQHIKSEVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILTHDYGTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKLKPFLDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQHITLSDEERQIYQSVKNEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLTNAGSAGGPSAFSLGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRHDIHGDNLLECPPEELACDSERKSNTEWTSSSKINALMHALIELRTKNPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEEGSPTVMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKKISANETKQAKINEIRTLIDL
SIO_010081: Hltf
subclass of: SO_0000673
so part of: Hltf
location: join(867497..867516,868722..868929,870182..870348,872029..872162,873196..873293,875203..875277,875439..875630,878343..878438,879132..879225,880415..880508,881865..881944,882036..882080,882577..882666,883823..883920,884882..885025,885911..886049,886986..887121,887698..887877,890315..890439,891313..891503,892793..892918,893326..893438,893763..893943,895131..895211,898020..898172)
location: region:867497-898172:1
so has part: feature:867497-867516:1:exon
so has part: feature:868722-868929:1:exon
so has part: feature:870182-870348:1:exon
so has part: feature:872029-872162:1:exon
so has part: feature:873196-873293:1:exon
so has part: feature:875203-875277:1:exon
so has part: feature:875439-875630:1:exon
so has part: feature:878343-878438:1:exon
so has part: feature:879132-879225:1:exon
so has part: feature:880415-880508:1:exon
so has part: feature:881865-881944:1:exon
so has part: feature:882036-882080:1:exon
so has part: feature:882577-882666:1:exon
so has part: feature:883823-883920:1:exon
so has part: feature:884882-885025:1:exon
so has part: feature:885911-886049:1:exon
so has part: feature:886986-887121:1:exon
so has part: feature:887698-887877:1:exon
so has part: feature:890315-890439:1:exon
so has part: feature:891313-891503:1:exon
so has part: feature:892793-892918:1:exon
so has part: feature:893326-893438:1:exon
so has part: feature:893763-893943:1:exon
so has part: feature:895131-895211:1:exon
so has part: feature:898020-898172:1:exon

XP_048190637.1
type: Protein
SIO_000068: ncbiprotein

position:867497:1
position: 867497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898172:1
position: 898172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867497-867516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868722-868929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870182-870348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:872029-872162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873196-873293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875203-875277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875439-875630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878343-878438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879132-879225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880415-880508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881865-881944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:882036-882080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:882577-882666:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:883823-883920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884882-885025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885911-886049:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:886986-887121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:887698-887877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:890315-890439:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:891313-891503:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:892793-892918:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:893326-893438:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:893763-893943:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:895131-895211:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:898020-898172:1:exon

Hltf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hltf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase-like transcription factor isoform X4
translation: MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLFGTLRGHVVGLRYYTGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHLKKDLAAALASIMDNKLAQVEGVVPFGANNAFTMPLHMTFWGKEENRKAVLDQLKKHGFKLGPAPKTLGFSLESGWNSGRAGPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTHEMEPAEAVETPLLPHQKQALSWMISRENSKDLPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIAVILTNFHDGSPLPVERVKKNQQKKEHKDCTLNSTPSTPVKLGRSCTSGEADGLSKVEGPRCSEEPSVSNIKKKKQPMSESSSSRPKRRKTAVQYIESSDSEEAETSELPQKMKGKLKNVQSETRSRAKAGSSKVKEDVAFACALTSSTPATKKKMLKKGGSAVVGSKKSEIEERPRTTLIICPLSVLSNWIDQFGQHIKSEVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILTHDYGTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKLKPFLDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQHITLSDEERQIYQSVKNEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLTNAGSAGGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRHDIHGDNLLECPPEELACDSERKSNTEWTSSSKINALMHALIELRTKNPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEEGSPTVMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKKISANETKQAKINEIRTLIDL
SIO_010081: Hltf
subclass of: SO_0000673
so part of: Hltf
location: join(867497..867516,868722..868929,870182..870348,872029..872162,873196..873293,875203..875277,875439..875630,878343..878438,879132..879225,880415..880508,881865..881944,882036..882080,882577..882666,883823..883920,884882..885025,885911..886049,886986..887121,887698..887877,890315..890439,891325..891503,892793..892918,893326..893438,893763..893943,895131..895211,898020..898172)
location: region:867497-898172:1
so has part: feature:867497-867516:1:exon
so has part: feature:868722-868929:1:exon
so has part: feature:870182-870348:1:exon
so has part: feature:872029-872162:1:exon
so has part: feature:873196-873293:1:exon
so has part: feature:875203-875277:1:exon
so has part: feature:875439-875630:1:exon
so has part: feature:878343-878438:1:exon
so has part: feature:879132-879225:1:exon
so has part: feature:880415-880508:1:exon
so has part: feature:881865-881944:1:exon
so has part: feature:882036-882080:1:exon
so has part: feature:882577-882666:1:exon
so has part: feature:883823-883920:1:exon
so has part: feature:884882-885025:1:exon
so has part: feature:885911-886049:1:exon
so has part: feature:886986-887121:1:exon
so has part: feature:887698-887877:1:exon
so has part: feature:890315-890439:1:exon
so has part: feature:891325-891503:1:exon
so has part: feature:892793-892918:1:exon
so has part: feature:893326-893438:1:exon
so has part: feature:893763-893943:1:exon
so has part: feature:895131-895211:1:exon
so has part: feature:898020-898172:1:exon

XP_048190641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:867497-867516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868722-868929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870182-870348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:872029-872162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873196-873293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875203-875277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875439-875630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878343-878438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879132-879225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880415-880508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881865-881944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:882036-882080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:882577-882666:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:883823-883920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884882-885025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885911-886049:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:886986-887121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:887698-887877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:890315-890439:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:891325-891503:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:892793-892918:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:893326-893438:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:893763-893943:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:895131-895211:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:898020-898172:1:exon

Hltf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hltf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase-like transcription factor isoform X3
translation: MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLFGTLRGHVVGLRYYTGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHLKKDLAAALASIMDNKLAQVEGVVPFGANNAFTMPLHMTFWGKEENRKAVLDQLKKHGFKLGPAPKTLGFSLESGWNSGRAGPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTHEMEPAEAVETPLLPHQKQALSWMISRENSKDLPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIAVILTNFHDGSPLPVERVKKNQQKKEHKDCTLNSTPSTPVKLGRSCTSGEADGLSKVEGPRCSEEPSVSNIKKKKQPMSESSSSRPKRRKTAVQYIESSDSEEAETSELPQKMKGKLKNVQSETRSRAKGSSKVKEDVAFACALTSSTPATKKKMLKKGGSAVVGSKKSEIEERPRTTLIICPLSVLSNWIDQFGQHIKSEVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILTHDYGTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKLKPFLDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQHITLSDEERQIYQSVKNEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLTNAGSAGGPSAFSLGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRHDIHGDNLLECPPEELACDSERKSNTEWTSSSKINALMHALIELRTKNPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEEGSPTVMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKKISANETKQAKINEIRTLIDL
SIO_010081: Hltf
subclass of: SO_0000673
so part of: Hltf
location: join(867497..867516,868722..868929,870182..870348,872029..872162,873196..873293,875203..875277,875439..875630,878343..878438,879132..879225,880415..880508,881865..881944,882036..882080,882580..882666,883823..883920,884882..885025,885911..886049,886986..887121,887698..887877,890315..890439,891313..891503,892793..892918,893326..893438,893763..893943,895131..895211,898020..898172)
location: region:867497-898172:1
so has part: feature:867497-867516:1:exon
so has part: feature:868722-868929:1:exon
so has part: feature:870182-870348:1:exon
so has part: feature:872029-872162:1:exon
so has part: feature:873196-873293:1:exon
so has part: feature:875203-875277:1:exon
so has part: feature:875439-875630:1:exon
so has part: feature:878343-878438:1:exon
so has part: feature:879132-879225:1:exon
so has part: feature:880415-880508:1:exon
so has part: feature:881865-881944:1:exon
so has part: feature:882036-882080:1:exon
so has part: feature:882580-882666:1:exon
so has part: feature:883823-883920:1:exon
so has part: feature:884882-885025:1:exon
so has part: feature:885911-886049:1:exon
so has part: feature:886986-887121:1:exon
so has part: feature:887698-887877:1:exon
so has part: feature:890315-890439:1:exon
so has part: feature:891313-891503:1:exon
so has part: feature:892793-892918:1:exon
so has part: feature:893326-893438:1:exon
so has part: feature:893763-893943:1:exon
so has part: feature:895131-895211:1:exon
so has part: feature:898020-898172:1:exon

XP_048190640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:867497-867516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868722-868929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870182-870348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:872029-872162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873196-873293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875203-875277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875439-875630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878343-878438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879132-879225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880415-880508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881865-881944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:882036-882080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:882580-882666:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:883823-883920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884882-885025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885911-886049:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:886986-887121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:887698-887877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:890315-890439:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:891313-891503:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:892793-892918:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:893326-893438:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:893763-893943:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:895131-895211:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:898020-898172:1:exon

Hltf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hltf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase-like transcription factor isoform X2
translation: MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLFGTLRGHVVGLRYYTGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHLKKDLAAALASIMDNKLAQVEGVVPFGANNAFTMPLHMTFWGKEENRKAVLDQLKKHGFKLGPAPKTLGFSLESGWNSGRAGPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTHEMEPAEAVETPLLPHQKQALSWMISRENSKDLPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIAVILTNFHDGSPLPVERVKKNQQKKEHKDCTLNSTPSTPVKLGRSCTSGEADGLSKEGPRCSEEPSVSNIKKKKQPMSESSSSRPKRRKTAVQYIESSDSEEAETSELPQKMKGKLKNVQSETRSRAKAGSSKVKEDVAFACALTSSTPATKKKMLKKGGSAVVGSKKSEIEERPRTTLIICPLSVLSNWIDQFGQHIKSEVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILTHDYGTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKLKPFLDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQHITLSDEERQIYQSVKNEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLTNAGSAGGPSAFSLGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRHDIHGDNLLECPPEELACDSERKSNTEWTSSSKINALMHALIELRTKNPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEEGSPTVMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKKISANETKQAKINEIRTLIDL
SIO_010081: Hltf
subclass of: SO_0000673
so part of: Hltf
location: join(867497..867516,868722..868929,870182..870348,872029..872162,873196..873293,875203..875277,875439..875630,878343..878438,879132..879225,880418..880508,881865..881944,882036..882080,882577..882666,883823..883920,884882..885025,885911..886049,886986..887121,887698..887877,890315..890439,891313..891503,892793..892918,893326..893438,893763..893943,895131..895211,898020..898172)
location: region:867497-898172:1
so has part: feature:867497-867516:1:exon
so has part: feature:868722-868929:1:exon
so has part: feature:870182-870348:1:exon
so has part: feature:872029-872162:1:exon
so has part: feature:873196-873293:1:exon
so has part: feature:875203-875277:1:exon
so has part: feature:875439-875630:1:exon
so has part: feature:878343-878438:1:exon
so has part: feature:879132-879225:1:exon
so has part: feature:880418-880508:1:exon
so has part: feature:881865-881944:1:exon
so has part: feature:882036-882080:1:exon
so has part: feature:882577-882666:1:exon
so has part: feature:883823-883920:1:exon
so has part: feature:884882-885025:1:exon
so has part: feature:885911-886049:1:exon
so has part: feature:886986-887121:1:exon
so has part: feature:887698-887877:1:exon
so has part: feature:890315-890439:1:exon
so has part: feature:891313-891503:1:exon
so has part: feature:892793-892918:1:exon
so has part: feature:893326-893438:1:exon
so has part: feature:893763-893943:1:exon
so has part: feature:895131-895211:1:exon
so has part: feature:898020-898172:1:exon

XP_048190639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:867497-867516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868722-868929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870182-870348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:872029-872162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873196-873293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875203-875277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875439-875630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878343-878438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879132-879225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880418-880508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881865-881944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:882036-882080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:882577-882666:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:883823-883920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884882-885025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885911-886049:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:886986-887121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:887698-887877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:890315-890439:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:891313-891503:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:892793-892918:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:893326-893438:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:893763-893943:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:895131-895211:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:898020-898172:1:exon

Hltf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hltf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase-like transcription factor isoform X5
translation: MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLFGTLRGHVVGLRYYTGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHLKKDLAAALASIMDNKLAQVEGVVPFGANNAFTMPLHMTFWGKEENRKAVLDQLKKHGFKLGPAPKTLGFSLESGWNSGRAGPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTHEMEPAEAVETPLLPHQKQALSWMISRENSKDLPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIAVILTNFHDGSPLPVERVKKNQQKKEHKDCTLNSTPSTPVKLGRSCTSGEADGLSKEGPRCSEEPSVSNIKKKKQPMSESSSSRPKRRKTAVQYIESSDSEEAETSELPQKMKGKLKNVQSETRSRAKAGSSKVKEDVAFACALTSSTPATKKKMLKKGGSAVVGSKKSEIEERPRTTLIICPLSVLSNWIDQFGQHIKSEVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILTHDYGTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKLKPFLDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQHITLSDEERQIYQSVKNEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLTNAGSAGGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRHDIHGDNLLECPPEELACDSERKSNTEWTSSSKINALMHALIELRTKNPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEEGSPTVMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKKISANETKQAKINEIRTLIDL
SIO_010081: Hltf
subclass of: SO_0000673
so part of: Hltf
location: join(867497..867516,868722..868929,870182..870348,872029..872162,873196..873293,875203..875277,875439..875630,878343..878438,879132..879225,880418..880508,881865..881944,882036..882080,882577..882666,883823..883920,884882..885025,885911..886049,886986..887121,887698..887877,890315..890439,891325..891503,892793..892918,893326..893438,893763..893943,895131..895211,898020..898172)
location: region:867497-898172:1
so has part: feature:867497-867516:1:exon
so has part: feature:868722-868929:1:exon
so has part: feature:870182-870348:1:exon
so has part: feature:872029-872162:1:exon
so has part: feature:873196-873293:1:exon
so has part: feature:875203-875277:1:exon
so has part: feature:875439-875630:1:exon
so has part: feature:878343-878438:1:exon
so has part: feature:879132-879225:1:exon
so has part: feature:880418-880508:1:exon
so has part: feature:881865-881944:1:exon
so has part: feature:882036-882080:1:exon
so has part: feature:882577-882666:1:exon
so has part: feature:883823-883920:1:exon
so has part: feature:884882-885025:1:exon
so has part: feature:885911-886049:1:exon
so has part: feature:886986-887121:1:exon
so has part: feature:887698-887877:1:exon
so has part: feature:890315-890439:1:exon
so has part: feature:891325-891503:1:exon
so has part: feature:892793-892918:1:exon
so has part: feature:893326-893438:1:exon
so has part: feature:893763-893943:1:exon
so has part: feature:895131-895211:1:exon
so has part: feature:898020-898172:1:exon

XP_048190642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:867497-867516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868722-868929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870182-870348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:872029-872162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873196-873293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875203-875277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875439-875630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878343-878438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879132-879225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880418-880508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881865-881944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:882036-882080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:882577-882666:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:883823-883920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884882-885025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885911-886049:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:886986-887121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:887698-887877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:890315-890439:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:891325-891503:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:892793-892918:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:893326-893438:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:893763-893943:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:895131-895211:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:898020-898172:1:exon

Hltf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hltf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase-like transcription factor isoform X6
translation: MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLFGTLRGHVVGLRYYTGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHLKKDLAAALASIMDNKLAQVEGVVPFGANNAFTMPLHMTFWGKEENRKAVLDQLKKHGFKLGPAPKTLGFSLESGWNSGRAGPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTHEMEPAEAVETPLLPHQKQALSWMISRENSKDLPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIAVILTNFHDGSPLPVERVKKNQQKKEHKDCTLNSTPSTPVKLGRSCTSGEADGLSKEGPRCSEEPSVSNIKKKKQPMSESSSSRPKRRKTAVQYIESSDSEEAETSELPQKMKGKLKNVQSETRSRAKGSSKVKEDVAFACALTSSTPATKKKMLKKGGSAVVGSKKSEIEERPRTTLIICPLSVLSNWIDQFGQHIKSEVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILTHDYGTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKLKPFLDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQHITLSDEERQIYQSVKNEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLTNAGSAGGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRHDIHGDNLLECPPEELACDSERKSNTEWTSSSKINALMHALIELRTKNPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEEGSPTVMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKKISANETKQAKINEIRTLIDL
SIO_010081: Hltf
subclass of: SO_0000673
so part of: Hltf
location: join(867497..867516,868722..868929,870182..870348,872029..872162,873196..873293,875203..875277,875439..875630,878343..878438,879132..879225,880418..880508,881865..881944,882036..882080,882580..882666,883823..883920,884882..885025,885911..886049,886986..887121,887698..887877,890315..890439,891325..891503,892793..892918,893326..893438,893763..893943,895131..895211,898020..898172)
location: region:867497-898172:1
so has part: feature:867497-867516:1:exon
so has part: feature:868722-868929:1:exon
so has part: feature:870182-870348:1:exon
so has part: feature:872029-872162:1:exon
so has part: feature:873196-873293:1:exon
so has part: feature:875203-875277:1:exon
so has part: feature:875439-875630:1:exon
so has part: feature:878343-878438:1:exon
so has part: feature:879132-879225:1:exon
so has part: feature:880418-880508:1:exon
so has part: feature:881865-881944:1:exon
so has part: feature:882036-882080:1:exon
so has part: feature:882580-882666:1:exon
so has part: feature:883823-883920:1:exon
so has part: feature:884882-885025:1:exon
so has part: feature:885911-886049:1:exon
so has part: feature:886986-887121:1:exon
so has part: feature:887698-887877:1:exon
so has part: feature:890315-890439:1:exon
so has part: feature:891325-891503:1:exon
so has part: feature:892793-892918:1:exon
so has part: feature:893326-893438:1:exon
so has part: feature:893763-893943:1:exon
so has part: feature:895131-895211:1:exon
so has part: feature:898020-898172:1:exon

XP_048190643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:867497-867516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868722-868929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870182-870348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:872029-872162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873196-873293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875203-875277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875439-875630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878343-878438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879132-879225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880418-880508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881865-881944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:882036-882080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:882580-882666:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:883823-883920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884882-885025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885911-886049:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:886986-887121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:887698-887877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:890315-890439:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:891325-891503:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:892793-892918:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:893326-893438:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:893763-893943:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:895131-895211:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:898020-898172:1:exon

Gyg1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Gyg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(902013..921366)
location: region:902013-921366:-1
so has part: feature:902013-921366:-1:exon
subclass of: SO_0000010

125342491
type: Gene
SIO_000068: ncbigene

position:902013:-1
position: 902013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921366:-1
position: 921366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902013-921366:-1:exon

Gyg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Gyg1
product: glycogenin 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334690.1
SIO_010081: Gyg1
subclass of: SO_0000673
so part of: Gyg1
location: complement(join(902013..902845,904708..904927,908505..908631,916313..916475,916698..916872,919121..919256,921211..921366))
location: region:902013-921366:-1
so has part: feature:921211-921366:-1:exon
so has part: feature:919121-919256:-1:exon
so has part: feature:916698-916872:-1:exon
so has part: feature:916313-916475:-1:exon
so has part: feature:908505-908631:-1:exon
so has part: feature:904708-904927:-1:exon
so has part: feature:902013-902845:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:921211-921366:-1:exon

position:921211:-1
position: 921211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:919121-919256:-1:exon

position:919121:-1
position: 919121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919256:-1
position: 919256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:916698-916872:-1:exon

position:916698:-1
position: 916698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916872:-1
position: 916872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:916313-916475:-1:exon

position:916313:-1
position: 916313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916475:-1
position: 916475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:908505-908631:-1:exon

position:908505:-1
position: 908505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908631:-1
position: 908631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:904708-904927:-1:exon

position:904708:-1
position: 904708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904927:-1
position: 904927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:902013-902845:-1:exon

position:902845:-1
position: 902845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gyg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Gyg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycogenin-1
translation: MADQAFVTLTTNDAYAKGALVLGSSLKQQGTTRKLVVLTTPQVSDAMRKALETVFDEVITVDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPDPGWPDCFNSGVFVYQPSAETYSQLLHLAAEQGSFDGGDQGLLNTFFSSWATTDIRKHLPFIYNMSSIAIYSYLPAFKAFGASAKVVHFLGRVKPWNYTYDPHTKSVHSVSQDTPVTHPELLSLWWELFSTSVAPLLQSLGLIHDPGSYLSVEQVSGAISHLSLGEVPAVPQTFASSEERKERWEQGQADYMGVDSFDNIKRKLDTYLQ
SIO_010081: Gyg1
subclass of: SO_0000673
so part of: Gyg1
location: complement(join(902672..902845,904708..904927,908505..908631,916313..916475,916698..916872,919121..919256,921211..921217))
location: region:902672-921217:-1
so has part: feature:921211-921217:-1:exon
so has part: feature:919121-919256:-1:exon
so has part: feature:916698-916872:-1:exon
so has part: feature:916313-916475:-1:exon
so has part: feature:908505-908631:-1:exon
so has part: feature:904708-904927:-1:exon
so has part: feature:902672-902845:-1:exon

XP_048190647.1
type: Protein
SIO_000068: ncbiprotein

position:902672:-1
position: 902672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921217:-1
position: 921217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921211-921217:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:919121-919256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916698-916872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916313-916475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:908505-908631:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:904708-904927:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:902672-902845:-1:exon

LOC125342440
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(944712..944974)
location: region:944712-944974:-1
so has part: feature:944712-944974:-1:exon
subclass of: SO_0000010

125342440
type: Gene
SIO_000068: ncbigene

position:944712:-1
position: 944712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944974:-1
position: 944974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944712-944974:-1:exon

LOC125342440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342440
product: 40S ribosomal protein S29-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334595.1
SIO_010081: LOC125342440
subclass of: SO_0000673
so part of: LOC125342440
location: complement(944712..944974)
location: region:944712-944974:-1
so has part: feature:944712-944974:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:944712-944974:-1:exon

LOC125342440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S29-like
translation: MGHQQLPWSHPRKLGQGSRSSRACSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD
SIO_010081: LOC125342440
subclass of: SO_0000673
so part of: LOC125342440
location: complement(944798..944968)
location: region:944798-944968:-1
so has part: feature:944798-944968:-1:exon

XP_048190552.1
type: Protein
SIO_000068: ncbiprotein

position:944798:-1
position: 944798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944968:-1
position: 944968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944798-944968:-1:exon

Cpa3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Cpa3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(949802..966888)
location: region:949802-966888:-1
so has part: feature:949802-966888:-1:exon
subclass of: SO_0000010

125342439
type: Gene
SIO_000068: ncbigene

position:949802:-1
position: 949802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966888:-1
position: 966888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949802-966888:-1:exon

Cpa3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cpa3
product: carboxypeptidase A3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334594.1
SIO_010081: Cpa3
subclass of: SO_0000673
so part of: Cpa3
location: complement(join(949802..950350,951299..951383,952505..952707,953800..953890,955089..955199,957280..957381,958313..958414,958523..958625,963528..963652,966652..966727,966821..966888))
location: region:949802-966888:-1
so has part: feature:966821-966888:-1:exon
so has part: feature:966652-966727:-1:exon
so has part: feature:963528-963652:-1:exon
so has part: feature:958523-958625:-1:exon
so has part: feature:958313-958414:-1:exon
so has part: feature:957280-957381:-1:exon
so has part: feature:955089-955199:-1:exon
so has part: feature:953800-953890:-1:exon
so has part: feature:952505-952707:-1:exon
so has part: feature:951299-951383:-1:exon
so has part: feature:949802-950350:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:966821-966888:-1:exon

position:966821:-1
position: 966821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:966652-966727:-1:exon

position:966652:-1
position: 966652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966727:-1
position: 966727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:963528-963652:-1:exon

position:963528:-1
position: 963528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963652:-1
position: 963652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:958523-958625:-1:exon

position:958523:-1
position: 958523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958625:-1
position: 958625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:958313-958414:-1:exon

position:958313:-1
position: 958313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958414:-1
position: 958414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:957280-957381:-1:exon

position:957280:-1
position: 957280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957381:-1
position: 957381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:955089-955199:-1:exon

position:955089:-1
position: 955089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:955199:-1
position: 955199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:953800-953890:-1:exon

position:953800:-1
position: 953800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953890:-1
position: 953890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:952505-952707:-1:exon

position:952505:-1
position: 952505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952707:-1
position: 952707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:951299-951383:-1:exon

position:951299:-1
position: 951299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951383:-1
position: 951383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:949802-950350:-1:exon

position:950350:-1
position: 950350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cpa3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cpa3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mast cell carboxypeptidase A
translation: MRLLLQVGLIATALAIAPVRFDRHKVFRVKPQDETQADVINHLAQTNELDFWHPDAIQRVAANMTVDFRVSETESPSIQAALDLSKMHYEILIHDLQEEIEKQFDVKEDNPGRHSYAKYNNWDKIVAWTEKMVKKHPELVSRIKIGSTVEDNPLYVLQIGKENEGRKAIFMDCGIHAREWVSPAFCQWFVYQATKSYGKNKIMTKLLNQMNFYVLPVFNVDGYIWSWTQNRMWRKNRSKHQNSTCIGTDLNRNFDASWSSSPSKYNPCKETYPGPAPESEKETAAVANFIRTHLESIKGYLSFHSYFQMLLFPYGYTSKLPPNYQELDKVAKIGADVLSTRYETHYIYGPIASTIYPASGSSLDWAYELGIKHTFTFELRDTGRFGFLLPESQIKPTCKETMLAVKFIAKYILKNAP
SIO_010081: Cpa3
subclass of: SO_0000673
so part of: Cpa3
location: complement(join(950163..950350,951299..951383,952505..952707,953800..953890,955089..955199,957280..957381,958313..958414,958523..958625,963528..963652,966652..966727,966821..966888))
location: region:950163-966888:-1
so has part: feature:966821-966888:-1:exon
so has part: feature:966652-966727:-1:exon
so has part: feature:963528-963652:-1:exon
so has part: feature:958523-958625:-1:exon
so has part: feature:958313-958414:-1:exon
so has part: feature:957280-957381:-1:exon
so has part: feature:955089-955199:-1:exon
so has part: feature:953800-953890:-1:exon
so has part: feature:952505-952707:-1:exon
so has part: feature:951299-951383:-1:exon
so has part: feature:950163-950350:-1:exon

XP_048190551.1
type: Protein
SIO_000068: ncbiprotein

position:950163:-1
position: 950163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966821-966888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:966652-966727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963528-963652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958523-958625:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:958313-958414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:957280-957381:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:955089-955199:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:953800-953890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:952505-952707:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:951299-951383:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:950163-950350:-1:exon

Cpb1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Cpb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(969190..990047)
location: region:969190-990047:-1
so has part: feature:969190-990047:-1:exon
subclass of: SO_0000010

125342453
type: Gene
SIO_000068: ncbigene

position:969190:-1
position: 969190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990047:-1
position: 990047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969190-990047:-1:exon

Cpb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cpb1
product: carboxypeptidase B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048334614.1
SIO_010081: Cpb1
subclass of: SO_0000673
so part of: Cpb1
location: complement(join(969190..969556,969900..969984,976765..976967,977693..977783,977868..977978,978538..978639,979468..979569,979663..979762,985174..985298,989798..989873,989974..990047))
location: region:969190-990047:-1
so has part: feature:989974-990047:-1:exon
so has part: feature:989798-989873:-1:exon
so has part: feature:985174-985298:-1:exon
so has part: feature:979663-979762:-1:exon
so has part: feature:979468-979569:-1:exon
so has part: feature:978538-978639:-1:exon
so has part: feature:977868-977978:-1:exon
so has part: feature:977693-977783:-1:exon
so has part: feature:976765-976967:-1:exon
so has part: feature:969900-969984:-1:exon
so has part: feature:969190-969556:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:989974-990047:-1:exon

position:989974:-1
position: 989974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:989798-989873:-1:exon

position:989798:-1
position: 989798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989873:-1
position: 989873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:985174-985298:-1:exon

position:985174:-1
position: 985174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985298:-1
position: 985298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:979663-979762:-1:exon

position:979663:-1
position: 979663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979762:-1
position: 979762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:979468-979569:-1:exon

position:979468:-1
position: 979468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979569:-1
position: 979569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:978538-978639:-1:exon

position:978538:-1
position: 978538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978639:-1
position: 978639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:977868-977978:-1:exon

position:977868:-1
position: 977868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977978:-1
position: 977978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:977693-977783:-1:exon

position:977693:-1
position: 977693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977783:-1
position: 977783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:976765-976967:-1:exon

position:976765:-1
position: 976765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976967:-1
position: 976967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:969900-969984:-1:exon

position:969900:-1
position: 969900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969984:-1
position: 969984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:969190-969556:-1:exon

position:969556:-1
position: 969556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cpb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cpb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase B
translation: MWLLLVLLGVALVSAHSSVEQLEGNKVFRVSVEDEDHIKLIHELARAHQIDFWKPDSATQVKPHSSIDFHVKTEDSAMVEDFLGQNELQYEVLINNLRHAMEAQLDSLGRATGHSYTKYNNWETIEAWTQQVEAENPDLVSRSVIGTTFEGRNMYLLKVGKAKPNKPAIFIDCGFHAREWISPAFCQWFVREAVRTYRKEIQMTSLLDELDFYVLPVVNIDGYVYTWTKDRMWRKTRSVQAGSSCAGVDPNRNFNAGWCKIGASRSPCSDTYCGPAPESEKETKALADFIRSKRSSIKAYLTIHSYSQLLLYPYSYDYLLPENNKELNALAKAAVKELASLHGTKYTYGPGATTIYPAAGGSDDWAYDEGIKYSFTFELRDKGRYGFALPESQIRPTCEETMLAVKYIANYVLNNPY
SIO_010081: Cpb1
subclass of: SO_0000673
so part of: Cpb1
location: complement(join(969369..969556,969900..969984,976765..976967,977693..977783,977868..977978,978538..978639,979468..979569,979663..979762,985174..985298,989798..989873,989974..990044))
location: region:969369-990044:-1
so has part: feature:989974-990044:-1:exon
so has part: feature:989798-989873:-1:exon
so has part: feature:985174-985298:-1:exon
so has part: feature:979663-979762:-1:exon
so has part: feature:979468-979569:-1:exon
so has part: feature:978538-978639:-1:exon
so has part: feature:977868-977978:-1:exon
so has part: feature:977693-977783:-1:exon
so has part: feature:976765-976967:-1:exon
so has part: feature:969900-969984:-1:exon
so has part: feature:969369-969556:-1:exon

XP_048190571.1
type: Protein
SIO_000068: ncbiprotein

position:969369:-1
position: 969369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990044:-1
position: 990044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989974-990044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989798-989873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985174-985298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979663-979762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979468-979569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:978538-978639:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:977868-977978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:977693-977783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:976765-976967:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:969900-969984:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:969369-969556:-1:exon

Agtr1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Agtr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1018763..1054676)
location: region:1018763-1054676:-1
so has part: feature:1018763-1054676:-1:exon
subclass of: SO_0000010

125342450
type: Gene
SIO_000068: ncbigene

position:1018763:-1
position: 1018763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054676:-1
position: 1054676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018763-1054676:-1:exon

Agtr1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Agtr1
product: angiotensin II receptor type 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334612.1
SIO_010081: Agtr1
subclass of: SO_0000673
so part of: Agtr1
location: complement(join(1018763..1020812,1045257..1045340,1054628..1054676))
location: region:1018763-1054676:-1
so has part: feature:1054628-1054676:-1:exon
so has part: feature:1045257-1045340:-1:exon
so has part: feature:1018763-1020812:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1054628-1054676:-1:exon

position:1054628:-1
position: 1054628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1045257-1045340:-1:exon

position:1045257:-1
position: 1045257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045340:-1
position: 1045340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1018763-1020812:-1:exon

position:1020812:-1
position: 1020812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Agtr1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Agtr1
product: angiotensin II receptor type 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334613.1
SIO_010081: Agtr1
subclass of: SO_0000673
so part of: Agtr1
location: complement(join(1018763..1020812,1021332..1021443,1045257..1045340,1054628..1054676))
location: region:1018763-1054676:-1
so has part: feature:1054628-1054676:-1:exon
so has part: feature:1045257-1045340:-1:exon
so has part: feature:1021332-1021443:-1:exon
so has part: feature:1018763-1020812:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1054628-1054676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045257-1045340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1021332-1021443:-1:exon

position:1021332:-1
position: 1021332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021443:-1
position: 1021443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1018763-1020812:-1:exon

Agtr1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Agtr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type-1 angiotensin II receptor
translation: MILNSSTEDGIRRIQDDCPKAGRHGYIFVMIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCLSIDRYLAIVHPMKSRLRRTMLVAKITCIVIWLLAGLASLPSVIHRNVYFIENTNITVCAFHYESQNSTVPIGLGLTKNILGFTFPFLIILTSYTLIWKALKRAYEIQKNKPRNDDIFKIIMAIVLFFFFSWVPHQIFTFLDVLIQLGVIRDCTVSDVVDTALPITICLAYFNNCLNPLFYGFLGKKFKKYFLQLLKYIPPKAKSHSTLSTKMSTLSYRPSDHLGSSTKKPAPGFEVE
SIO_010081: Agtr1
subclass of: SO_0000673
so part of: Agtr1
location: complement(1019687..1020766)
location: region:1019687-1020766:-1
so has part: feature:1019687-1020766:-1:exon

XP_048190569.1
type: Protein
SIO_000068: ncbiprotein

position:1019687:-1
position: 1019687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020766:-1
position: 1020766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019687-1020766:-1:exon

Agtr1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Agtr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type-1 angiotensin II receptor
translation: MILNSSTEDGIRRIQDDCPKAGRHGYIFVMIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCLSIDRYLAIVHPMKSRLRRTMLVAKITCIVIWLLAGLASLPSVIHRNVYFIENTNITVCAFHYESQNSTVPIGLGLTKNILGFTFPFLIILTSYTLIWKALKRAYEIQKNKPRNDDIFKIIMAIVLFFFFSWVPHQIFTFLDVLIQLGVIRDCTVSDVVDTALPITICLAYFNNCLNPLFYGFLGKKFKKYFLQLLKYIPPKAKSHSTLSTKMSTLSYRPSDHLGSSTKKPAPGFEVE
SIO_010081: Agtr1
subclass of: SO_0000673
so part of: Agtr1
location: complement(1019687..1020766)
location: region:1019687-1020766:-1
so has part: feature:1019687-1020766:-1:exon

XP_048190570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1019687-1020766:-1:exon

LOC125342535
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1409733..1413403)
location: region:1409733-1413403:-1
so has part: feature:1409733-1413403:-1:exon
subclass of: SO_0000010

125342535
type: Gene
SIO_000068: ncbigene

position:1409733:-1
position: 1409733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413403:-1
position: 1413403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1409733-1413403:-1:exon

LOC125342535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342535
product: zinc finger protein ZIC 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_048334760.1
SIO_010081: LOC125342535
subclass of: SO_0000673
so part of: LOC125342535
location: complement(join(1409733..1409927,1410328..1410492,1412407..1413403))
location: region:1409733-1413403:-1
so has part: feature:1412407-1413403:-1:exon
so has part: feature:1410328-1410492:-1:exon
so has part: feature:1409733-1409927:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1412407-1413403:-1:exon

position:1412407:-1
position: 1412407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1410328-1410492:-1:exon

position:1410328:-1
position: 1410328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410492:-1
position: 1410492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1409733-1409927:-1:exon

position:1409927:-1
position: 1409927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125342535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342535
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein ZIC 1-like
translation: MLLDAGPQYPAIGVTTFGASRHHAAGDVAERDVGLGLNPFADGMGAFKLNPSSHELASAGQTAFTSQAPGYAAAAALGHHHHHHPGHVGSYSSAAFNSTRDFLFRNRGFGDAAAAASAQHSLFAASAAAGGFGAPHGPTDAAGHLLFPGLHAEQAAGHASPNVVNGQMRLGFSGDMYPRPEQYGQVTSPRSEHYGAPQLHGYAPVNVNMAAHHGAGAFFRYMRQPIKQELICKWIEPEQLASPKKSCNKTFSTMHELVTHVTVEHVGGPEQSNHICFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSYTHPSSLRKHMKVHESSQGSQPSPAASSGYESSTPPTIVSPSTDAPAASALSPPAPAVHHAAGHGALSSNFNEWYV
SIO_010081: LOC125342535
subclass of: SO_0000673
so part of: LOC125342535
location: complement(join(1409733..1409927,1410328..1410492,1412407..1413403))
location: region:1409733-1413403:-1
so has part: feature:1412407-1413403:-1:exon
so has part: feature:1410328-1410492:-1:exon
so has part: feature:1409733-1409927:-1:exon

XP_048190717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1412407-1413403:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1410328-1410492:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1409733-1409927:-1:exon

Plscr5
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Plscr5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1582460..1607690
location: region:1582460-1607690:1
so has part: feature:1582460-1607690:1:exon
subclass of: SO_0000010

125342312
type: Gene
SIO_000068: ncbigene

position:1582460:1
position: 1582460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1607690:1
position: 1607690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1582460-1607690:1:exon

Plscr5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Plscr5
product: phospholipid scramblase family member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334439.1
SIO_010081: Plscr5
subclass of: SO_0000673
so part of: Plscr5
location: join(1582460..1582526,1601702..1601865,1602419..1602461,1602979..1603203,1604960..1605120,1605947..1606108,1607275..1607357,1607443..1607690)
location: region:1582460-1607690:1
so has part: feature:1582460-1582526:1:exon
so has part: feature:1601702-1601865:1:exon
so has part: feature:1602419-1602461:1:exon
so has part: feature:1602979-1603203:1:exon
so has part: feature:1604960-1605120:1:exon
so has part: feature:1605947-1606108:1:exon
so has part: feature:1607275-1607357:1:exon
so has part: feature:1607443-1607690:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1582460-1582526:1:exon

position:1582526:1
position: 1582526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1601702-1601865:1:exon

position:1601702:1
position: 1601702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1601865:1
position: 1601865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1602419-1602461:1:exon

position:1602419:1
position: 1602419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1602461:1
position: 1602461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1602979-1603203:1:exon

position:1602979:1
position: 1602979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1603203:1
position: 1603203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1604960-1605120:1:exon

position:1604960:1
position: 1604960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605120:1
position: 1605120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1605947-1606108:1:exon

position:1605947:1
position: 1605947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1606108:1
position: 1606108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1607275-1607357:1:exon

position:1607275:1
position: 1607275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1607357:1
position: 1607357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1607443-1607690:1:exon

position:1607443:1
position: 1607443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Plscr5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Plscr5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid scramblase family member 5
translation: MRLISLPQLDLIIIHQQVELLGNGQSQKRRGAPGLLPGAGDPDGGLPVSSAGPGAPAPRSCLPQTASLPPGLEDLSQLDLIIIHQQVELLGMILGTETANKYEIKNSSGQRIYFAVEESLCFNRNVCSKLRSCSLRVSDNAGREVITVHRPLRCGSCCCPCYLQEVAEIQAPPGTTVSYVVQKWDPFRPKFTIQNANKEDVLKIVGPCVTCGCFGDVDFEVKTMNEKLTVGKISKYWSGFVNDMFTNADNFGVHVPADLDVAFKAAMIGACFLFDFMFFEHSLAGL
SIO_010081: Plscr5
subclass of: SO_0000673
so part of: Plscr5
location: join(1582460..1582526,1601702..1601865,1602419..1602461,1602979..1603203,1604960..1605120,1605947..1606108,1607275..1607313)
location: region:1582460-1607313:1
so has part: feature:1582460-1582526:1:exon
so has part: feature:1601702-1601865:1:exon
so has part: feature:1602419-1602461:1:exon
so has part: feature:1602979-1603203:1:exon
so has part: feature:1604960-1605120:1:exon
so has part: feature:1605947-1606108:1:exon
so has part: feature:1607275-1607313:1:exon

XP_048190396.1
type: Protein
SIO_000068: ncbiprotein

position:1607313:1
position: 1607313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1582460-1582526:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1601702-1601865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1602419-1602461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1602979-1603203:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1604960-1605120:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1605947-1606108:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1607275-1607313:1:exon

LOC125342608
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1614451..1619339
location: region:1614451-1619339:1
so has part: feature:1614451-1619339:1:exon
subclass of: SO_0000011

125342608
type: Gene
SIO_000068: ncbigene

position:1614451:1
position: 1614451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1619339:1
position: 1619339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1614451-1619339:1:exon

LOC125342608
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342608
product: uncharacterized LOC125342608
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007209246.1
SIO_010081: LOC125342608
subclass of: SO_0000673
so part of: LOC125342608
location: join(1614451..1614490,1618190..1618214,1619280..1619339)
location: region:1614451-1619339:1
so has part: feature:1614451-1614490:1:exon
so has part: feature:1618190-1618214:1:exon
so has part: feature:1619280-1619339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1614451-1614490:1:exon

position:1614490:1
position: 1614490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1618190-1618214:1:exon

position:1618190:1
position: 1618190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1618214:1
position: 1618214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1619280-1619339:1:exon

position:1619280:1
position: 1619280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342607
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1620154..1623294
location: region:1620154-1623294:1
so has part: feature:1620154-1623294:1:exon

125342607
type: Gene
SIO_000068: ncbigene

position:1620154:1
position: 1620154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1623294:1
position: 1623294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1620154-1623294:1:exon

LOC125342607
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342607
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC125342607
subclass of: SO_0000673
so part of: LOC125342607
location: 1620154..1620331
location: region:1620154-1620331:1
so has part: feature:1620154-1620331:1:exon

position:1620331:1
position: 1620331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1620154-1620331:1:exon

LOC125342607
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342607
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC125342607
subclass of: SO_0000673
so part of: LOC125342607
location: 1620537..1620579
location: region:1620537-1620579:1
so has part: feature:1620537-1620579:1:exon

position:1620537:1
position: 1620537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1620579:1
position: 1620579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1620537-1620579:1:exon

LOC125342607
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342607
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC125342607
subclass of: SO_0000673
so part of: LOC125342607
location: 1620709..1620930
location: region:1620709-1620930:1
so has part: feature:1620709-1620930:1:exon

position:1620709:1
position: 1620709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1620930:1
position: 1620930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1620709-1620930:1:exon

LOC125342607
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342607
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC125342607
subclass of: SO_0000673
so part of: LOC125342607
location: 1621035..1621197
location: region:1621035-1621197:1
so has part: feature:1621035-1621197:1:exon

position:1621035:1
position: 1621035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1621197:1
position: 1621197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1621035-1621197:1:exon

LOC125342607
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342607
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC125342607
subclass of: SO_0000673
so part of: LOC125342607
location: 1622536..1622697
location: region:1622536-1622697:1
so has part: feature:1622536-1622697:1:exon

position:1622536:1
position: 1622536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1622697:1
position: 1622697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1622536-1622697:1:exon

LOC125342607
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342607
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC125342607
subclass of: SO_0000673
so part of: LOC125342607
location: 1623226..1623294
location: region:1623226-1623294:1
so has part: feature:1623226-1623294:1:exon

position:1623226:1
position: 1623226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1623226-1623294:1:exon

LOC125342313
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1643770..1656528
location: region:1643770-1656528:1
so has part: feature:1643770-1656528:1:exon
subclass of: SO_0000010

125342313
type: Gene
SIO_000068: ncbigene

position:1643770:1
position: 1643770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1656528:1
position: 1656528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1643770-1656528:1:exon

LOC125342313
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342313
product: uncharacterized LOC125342313
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334440.1
SIO_010081: LOC125342313
subclass of: SO_0000673
so part of: LOC125342313
location: join(1643770..1644258,1644549..1644639,1645524..1645716,1645772..1645887,1650572..1650630,1652414..1652650,1653245..1653292,1654191..1654462,1654677..1654823,1655032..1655189,1655538..1656528)
location: region:1643770-1656528:1
so has part: feature:1643770-1644258:1:exon
so has part: feature:1644549-1644639:1:exon
so has part: feature:1645524-1645716:1:exon
so has part: feature:1645772-1645887:1:exon
so has part: feature:1650572-1650630:1:exon
so has part: feature:1652414-1652650:1:exon
so has part: feature:1653245-1653292:1:exon
so has part: feature:1654191-1654462:1:exon
so has part: feature:1654677-1654823:1:exon
so has part: feature:1655032-1655189:1:exon
so has part: feature:1655538-1656528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1643770-1644258:1:exon

position:1644258:1
position: 1644258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1644549-1644639:1:exon

position:1644549:1
position: 1644549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1644639:1
position: 1644639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1645524-1645716:1:exon

position:1645524:1
position: 1645524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1645716:1
position: 1645716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1645772-1645887:1:exon

position:1645772:1
position: 1645772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1645887:1
position: 1645887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1650572-1650630:1:exon

position:1650572:1
position: 1650572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1650630:1
position: 1650630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1652414-1652650:1:exon

position:1652414:1
position: 1652414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1652650:1
position: 1652650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1653245-1653292:1:exon

position:1653245:1
position: 1653245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653292:1
position: 1653292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1654191-1654462:1:exon

position:1654191:1
position: 1654191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1654462:1
position: 1654462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1654677-1654823:1:exon

position:1654677:1
position: 1654677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1654823:1
position: 1654823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1655032-1655189:1:exon

position:1655032:1
position: 1655032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1655189:1
position: 1655189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1655538-1656528:1:exon

position:1655538:1
position: 1655538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342313
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342313
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein LOC125342313
translation: MGVEETRVCFHEWPSGRQARVPSSEGPQHSPAWLGPAARSLAQPPSQACAPELQNQPCVGPSRGAGPRAMLAMPPSRWWAHPCLRPLADTLRPPSIGGHTPVAIIPLVDTLGPSVPLVDGHTLQRVLSLSAWEWAPAEQPTRRGSCPAACVSVEGDEHVFSAGLSKVIRELFTCASAIGVSSENCPLDTFARFEKLIRQNPSTWPRERRKEPRRPEMPRIRALLQLSTNSQFPGTRMHSRSPEDKIQKESRCPSPAPCSFHDHARSQSTEDKPEGLSGPSHCSAAEGMIHRGRWLQGTKGEPGPSSHRTTALTGPRETPWQPRPTWRGPPGVPALGYYFPPQQGTFLPPYQPFGNTYPIQCQPGRFPLLTQSGPVTWMPSPAPPANCPPGLEYLAQLDNIHVHQHFQPLEMITGLQFNNSYDIKNGAEQLVYVVTEHTDDYTRNAYRTLRPFELRVTDGTGRAVMALSRPFRCSCCCFCCDWPGRRSGPAGVRKELEGARGPPGTTIGYVAELWDLCRAEYSLRDAQKEAVLRVRGPCTTYGCGSDSVFQVLSLDGASXVGSITRKWNGLLSTMGNADHFHIRVPLDLSVTMKAVVLGACFLIDFMYFESSPRQPRSQTADQESDRQTD
SIO_010081: LOC125342313
subclass of: SO_0000673
so part of: LOC125342313
location: join(1643770..1644258,1644549..1644639,1645524..1645716,1645772..1645887,1650572..1650630,1652414..1652650,1653245..1653292,1654191..1654462,1654677..1654823,1655032..1655189,1655538..1655618)
location: region:1643770-1655618:1
so has part: feature:1643770-1644258:1:exon
so has part: feature:1644549-1644639:1:exon
so has part: feature:1645524-1645716:1:exon
so has part: feature:1645772-1645887:1:exon
so has part: feature:1650572-1650630:1:exon
so has part: feature:1652414-1652650:1:exon
so has part: feature:1653245-1653292:1:exon
so has part: feature:1654191-1654462:1:exon
so has part: feature:1654677-1654823:1:exon
so has part: feature:1655032-1655189:1:exon
so has part: feature:1655538-1655618:1:exon

XP_048190397.1
type: Protein
SIO_000068: ncbiprotein

position:1655618:1
position: 1655618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1643770-1644258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1644549-1644639:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1645524-1645716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1645772-1645887:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1650572-1650630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1652414-1652650:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1653245-1653292:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1654191-1654462:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1654677-1654823:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1655032-1655189:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1655538-1655618:1:exon

Plod2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Plod2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1667882..1706523
location: region:1667882-1706523:1
so has part: feature:1667882-1706523:1:exon
subclass of: SO_0000010

125342494
type: Gene
SIO_000068: ncbigene

position:1667882:1
position: 1667882
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1706523:1
position: 1706523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1667882-1706523:1:exon

Plod2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Plod2
product: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048334694.1
SIO_010081: Plod2
subclass of: SO_0000673
so part of: Plod2
location: join(<1667882..1668086,1681441..1681532,1682944..1683080,1686541..1686703,1688686..1688798,1689501..1689564,1690145..1690242,1692361..1692462,1694534..1694659,1695278..1695399,1696078..1696182,1698256..1698381,1699061..1699202,1700338..1700400,1701338..1701451,1704526..1704591,1705007..1705111,1705191..1705337,1705749..1705872,1706101..1706523)
location: region:1667882-1706523:1
so has part: feature:1667882-1668086:1:exon
so has part: feature:1681441-1681532:1:exon
so has part: feature:1682944-1683080:1:exon
so has part: feature:1686541-1686703:1:exon
so has part: feature:1688686-1688798:1:exon
so has part: feature:1689501-1689564:1:exon
so has part: feature:1690145-1690242:1:exon
so has part: feature:1692361-1692462:1:exon
so has part: feature:1694534-1694659:1:exon
so has part: feature:1695278-1695399:1:exon
so has part: feature:1696078-1696182:1:exon
so has part: feature:1698256-1698381:1:exon
so has part: feature:1699061-1699202:1:exon
so has part: feature:1700338-1700400:1:exon
so has part: feature:1701338-1701451:1:exon
so has part: feature:1704526-1704591:1:exon
so has part: feature:1705007-1705111:1:exon
so has part: feature:1705191-1705337:1:exon
so has part: feature:1705749-1705872:1:exon
so has part: feature:1706101-1706523:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1667882-1668086:1:exon

position:1668086:1
position: 1668086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1681441-1681532:1:exon

position:1681441:1
position: 1681441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681532:1
position: 1681532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1682944-1683080:1:exon

position:1682944:1
position: 1682944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683080:1
position: 1683080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1686541-1686703:1:exon

position:1686541:1
position: 1686541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686703:1
position: 1686703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1688686-1688798:1:exon

position:1688686:1
position: 1688686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1688798:1
position: 1688798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1689501-1689564:1:exon

position:1689501:1
position: 1689501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1689564:1
position: 1689564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1690145-1690242:1:exon

position:1690145:1
position: 1690145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690242:1
position: 1690242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1692361-1692462:1:exon

position:1692361:1
position: 1692361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692462:1
position: 1692462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1694534-1694659:1:exon

position:1694534:1
position: 1694534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1694659:1
position: 1694659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1695278-1695399:1:exon

position:1695278:1
position: 1695278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695399:1
position: 1695399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1696078-1696182:1:exon

position:1696078:1
position: 1696078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696182:1
position: 1696182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1698256-1698381:1:exon

position:1698256:1
position: 1698256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698381:1
position: 1698381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1699061-1699202:1:exon

position:1699061:1
position: 1699061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1699202:1
position: 1699202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1700338-1700400:1:exon

position:1700338:1
position: 1700338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1700400:1
position: 1700400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1701338-1701451:1:exon

position:1701338:1
position: 1701338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1701451:1
position: 1701451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1704526-1704591:1:exon

position:1704526:1
position: 1704526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1704591:1
position: 1704591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1705007-1705111:1:exon

position:1705007:1
position: 1705007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1705111:1
position: 1705111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1705191-1705337:1:exon

position:1705191:1
position: 1705191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1705337:1
position: 1705337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1705749-1705872:1:exon

position:1705749:1
position: 1705749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1705872:1
position: 1705872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1706101-1706523:1:exon

position:1706101:1
position: 1706101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Plod2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Plod2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2
translation: ARRLGPRPRPSRSREICASVGPRGAERAASGGRWCAAPRGPRGRRRRVCCCCCCWPLRPGLRASALTADKLLVLTVATQESDGFHRFMQSARYFNYTVKVLGQGEEWRGGGGANSIGGGQKVRLLKEAMRQYASQEDLVIFFTECFDVIFAAXPEEVLKKFQKSNHKVVFAADGILWPDKRLSDRYPVVHIGKRYLNAGGFVGYAPYVGRMAELWNLQDNDDDQLFYTKLYLDPGKREALNITLDHKCKIFQTLNGAVDEVVLKFENGKTRVKNTFYETLPVVVNGNGPTSILLNYFGNYVPNSWTQESGCTVCDSDTIDLSAADALPNVTLGVFIEQPTPFLPRFLDLLLALDYPKQALKLFIHNKEVYHEKEIKVFYDKAKHEIGTLKIVGPEEKLSQAEARNMGMDFCRQDENCNYYFSVDADVVLTNPKTLKILIEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYARSEDYVDIVQGKRVGVWNIPYLANVYLIKGETLRSEMNERNYFVRDKLDPDMALCRNAREMTLQREKDSPTPETFQMLSPPKGVFMYISNRHEFGRLLSTANYNTSHYNNDLWQIFENPMDWKEKYISRDYAKIFTENIVEQPCPDVFWFPIFSERACDELVEEMEHYGRWSGGKHHDSRISGGYENVPTDDIHMKQVGLEGVWLHFIREFIAPVTLKVFAGYYTKGFALLNFVVKYXPERQRALRPHHDASTFTINIALNHVGEDFQGGGCKFLRYNCSIESPRXGWSFMHPGAHAPARGLPVRSGTRYIAVSFIDP
SIO_010081: Plod2
subclass of: SO_0000673
so part of: Plod2
location: join(<1667882..1668086,1681441..1681532,1682944..1683080,1686541..1686703,1688686..1688798,1689501..1689564,1690145..1690242,1692361..1692462,1694534..1694659,1695278..1695399,1696078..1696182,1698256..1698381,1699061..1699202,1700338..1700400,1701338..1701451,1704526..1704591,1705007..1705111,1705191..1705337,1705749..1705872,1706101..1706252)
location: region:1667882-1706252:1
so has part: feature:1667882-1668086:1:exon
so has part: feature:1681441-1681532:1:exon
so has part: feature:1682944-1683080:1:exon
so has part: feature:1686541-1686703:1:exon
so has part: feature:1688686-1688798:1:exon
so has part: feature:1689501-1689564:1:exon
so has part: feature:1690145-1690242:1:exon
so has part: feature:1692361-1692462:1:exon
so has part: feature:1694534-1694659:1:exon
so has part: feature:1695278-1695399:1:exon
so has part: feature:1696078-1696182:1:exon
so has part: feature:1698256-1698381:1:exon
so has part: feature:1699061-1699202:1:exon
so has part: feature:1700338-1700400:1:exon
so has part: feature:1701338-1701451:1:exon
so has part: feature:1704526-1704591:1:exon
so has part: feature:1705007-1705111:1:exon
so has part: feature:1705191-1705337:1:exon
so has part: feature:1705749-1705872:1:exon
so has part: feature:1706101-1706252:1:exon

XP_048190651.1
type: Protein
SIO_000068: ncbiprotein

position:1706252:1
position: 1706252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1667882-1668086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1681441-1681532:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1682944-1683080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1686541-1686703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1688686-1688798:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1689501-1689564:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1690145-1690242:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1692361-1692462:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1694534-1694659:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1695278-1695399:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1696078-1696182:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1698256-1698381:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1699061-1699202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1700338-1700400:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1701338-1701451:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1704526-1704591:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1705007-1705111:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1705191-1705337:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1705749-1705872:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1706101-1706252:1:exon

Dipk2a
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Dipk2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1982048..1998848)
location: region:1982048-1998848:-1
so has part: feature:1982048-1998848:-1:exon
subclass of: SO_0000010

125342597
type: Gene
SIO_000068: ncbigene

position:1982048:-1
position: 1982048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1998848:-1
position: 1998848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1982048-1998848:-1:exon

Dipk2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Dipk2a
product: divergent protein kinase domain 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048334878.1
SIO_010081: Dipk2a
subclass of: SO_0000673
so part of: Dipk2a
location: complement(join(1982048..1982401,1984461..1984764,1998171..1998848))
location: region:1982048-1998848:-1
so has part: feature:1998171-1998848:-1:exon
so has part: feature:1984461-1984764:-1:exon
so has part: feature:1982048-1982401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1998171-1998848:-1:exon

position:1998171:-1
position: 1998171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1984461-1984764:-1:exon

position:1984461:-1
position: 1984461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1984764:-1
position: 1984764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1982048-1982401:-1:exon

position:1982401:-1
position: 1982401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dipk2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Dipk2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: divergent protein kinase domain 2A
translation: MWRLVPPKLGRLSRSLKLAALGSLLVLMALHSPSLLASWQRNELADRRFLQLNKCPACFGTSWCRRFLGGQVAFEAWGRLRLLDFLNVKNVYFAQSGEPREGGRRRVVLKRLGSARELAQLDQGICKRATGRPRCDLPQALPRTEFARLNGDVRLLTPEAVEGWSDLVHCPSQRLLDRLVRRYAETKDSGSFLLRNLKDSERMQLLLTLAFNPEPLVLQSFPSDEGWPFAKYLGACGRMVAVSYVGEDLWGYFHAPWEKRVDLAWQLMEIAEQLTNNDFEFALYLLDVSFDNFAVGPRDGKVIIVDAENVLVADKRLIRQNKPENWDVWYESKFDDCDKEACLSFSKETLCARVTVDHNYYAICQNLLSRHATWRGTSGGLLHDPPGDIARDGRLEALLDECAHPKRRYGRFQAAKELREYLAQLSSNAR
SIO_010081: Dipk2a
subclass of: SO_0000673
so part of: Dipk2a
location: complement(join(1982070..1982401,1984461..1984764,1998171..1998827))
location: region:1982070-1998827:-1
so has part: feature:1998171-1998827:-1:exon
so has part: feature:1984461-1984764:-1:exon
so has part: feature:1982070-1982401:-1:exon

XP_048190835.1
type: Protein
SIO_000068: ncbiprotein

position:1982070:-1
position: 1982070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1998827:-1
position: 1998827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1998171-1998827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1984461-1984764:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1982070-1982401:-1:exon

Slc9a9
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Slc9a9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2020586..2187602
location: region:2020586-2187602:1
so has part: feature:2020586-2187602:1:exon
subclass of: SO_0000010

125342528
type: Gene
SIO_000068: ncbigene

position:2020586:1
position: 2020586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2187602:1
position: 2187602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2020586-2187602:1:exon

Slc9a9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slc9a9
product: solute carrier family 9 member A9
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334749.1
SIO_010081: Slc9a9
subclass of: SO_0000673
so part of: Slc9a9
location: join(2020586..2020876,2027131..2027332,2036752..2036829,2037577..2037653,2078645..2078760,2096789..2096894,2127362..2127500,2127891..2127996,2133336..2133424,2156971..2157088,2157911..2158019,2166289..2166442,2183567..2183621,2187410..2187602)
location: region:2020586-2187602:1
so has part: feature:2020586-2020876:1:exon
so has part: feature:2027131-2027332:1:exon
so has part: feature:2036752-2036829:1:exon
so has part: feature:2037577-2037653:1:exon
so has part: feature:2078645-2078760:1:exon
so has part: feature:2096789-2096894:1:exon
so has part: feature:2127362-2127500:1:exon
so has part: feature:2127891-2127996:1:exon
so has part: feature:2133336-2133424:1:exon
so has part: feature:2156971-2157088:1:exon
so has part: feature:2157911-2158019:1:exon
so has part: feature:2166289-2166442:1:exon
so has part: feature:2183567-2183621:1:exon
so has part: feature:2187410-2187602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2020586-2020876:1:exon

position:2020876:1
position: 2020876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2027131-2027332:1:exon

position:2027131:1
position: 2027131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2027332:1
position: 2027332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2036752-2036829:1:exon

position:2036752:1
position: 2036752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2036829:1
position: 2036829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2037577-2037653:1:exon

position:2037577:1
position: 2037577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2037653:1
position: 2037653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2078645-2078760:1:exon

position:2078645:1
position: 2078645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2078760:1
position: 2078760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2096789-2096894:1:exon

position:2096789:1
position: 2096789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2096894:1
position: 2096894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2127362-2127500:1:exon

position:2127362:1
position: 2127362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2127500:1
position: 2127500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2127891-2127996:1:exon

position:2127891:1
position: 2127891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2127996:1
position: 2127996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2133336-2133424:1:exon

position:2133336:1
position: 2133336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2133424:1
position: 2133424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2156971-2157088:1:exon

position:2156971:1
position: 2156971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2157088:1
position: 2157088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2157911-2158019:1:exon

position:2157911:1
position: 2157911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2158019:1
position: 2158019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2166289-2166442:1:exon

position:2166289:1
position: 2166289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2166442:1
position: 2166442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2183567-2183621:1:exon

position:2183567:1
position: 2183567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2183621:1
position: 2183621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2187410-2187602:1:exon

position:2187410:1
position: 2187410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slc9a9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slc9a9
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sodium/hydrogen exchanger 9
translation: MDGRQPRWAGTGKAGSRSPHQGAAELLVFNFLLILTILTIWLFKNHRFRFLHETGGAMVYGLIMGLXLRYATAPTDMDSGTVYDCGKLAFSPSTLLVNITDQVYEYKYKREISQHNVSPHQGNALLEKMTFDPEIFFNVLLPPIIFHAGYSLKKRHFFQNLGSILTYAFLGTAISCVVIGLIVYGFVKAMQQAGQLKDGDFHFTDCLFFGSLMSATDPVTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVLTYSISIYSPKENPNAFNTAAFFQSVGNFLGIFAGSFAMGSAYAVVTALLTKFTKLCEFPMLETGLFFLLSWSAFLSAEAAGLTGIVAVLFCGVTQAHYTYNNLSPDSKGRTKQLFEFMNFLAENVIFCYMGLALFTFQNHTFNALFILGAFVSIFVARACNIYPLSFLLNLGRKEKIPTNFQHMMVFSGLRGAIAFALAIRNTESQPKQMMFSTALLLVFFTVWVFGGGTTPMLTWLQIRVGVDLEENRKPEEPASPQEANSVEKNTTRAESALLFRMWYGFDHKYPLVTVTPANAAAW
SIO_010081: Slc9a9
subclass of: SO_0000673
so part of: Slc9a9
location: join(2020696..2020876,2027131..2027332,2036752..2036829,2037577..2037653,2078645..2078760,2096789..2096894,2127362..2127500,2127891..2127996,2133336..2133424,2156971..2157088,2157911..2158019,2166289..2166442,2183567..2183621,2187410..2187535)
location: region:2020696-2187535:1
so has part: feature:2020696-2020876:1:exon
so has part: feature:2027131-2027332:1:exon
so has part: feature:2036752-2036829:1:exon
so has part: feature:2037577-2037653:1:exon
so has part: feature:2078645-2078760:1:exon
so has part: feature:2096789-2096894:1:exon
so has part: feature:2127362-2127500:1:exon
so has part: feature:2127891-2127996:1:exon
so has part: feature:2133336-2133424:1:exon
so has part: feature:2156971-2157088:1:exon
so has part: feature:2157911-2158019:1:exon
so has part: feature:2166289-2166442:1:exon
so has part: feature:2183567-2183621:1:exon
so has part: feature:2187410-2187535:1:exon

XP_048190706.1
type: Protein
SIO_000068: ncbiprotein

position:2020696:1
position: 2020696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2187535:1
position: 2187535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2020696-2020876:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2027131-2027332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2036752-2036829:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2037577-2037653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2078645-2078760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2096789-2096894:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2127362-2127500:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2127891-2127996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2133336-2133424:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2156971-2157088:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2157911-2158019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2166289-2166442:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2183567-2183621:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2187410-2187535:1:exon

Chst2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Chst2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2226001..2227599)
location: region:2226001-2227599:-1
so has part: feature:2226001-2227599:-1:exon
subclass of: SO_0000010

125342656
type: Gene
SIO_000068: ncbigene

position:2226001:-1
position: 2226001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2227599:-1
position: 2227599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2226001-2227599:-1:exon

Chst2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Chst2
product: carbohydrate sulfotransferase 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334964.1
SIO_010081: Chst2
subclass of: SO_0000673
so part of: Chst2
location: complement(join(2226001..2226551,2226602..2227599))
location: region:2226001-2227599:-1
so has part: feature:2226602-2227599:-1:exon
so has part: feature:2226001-2226551:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2226602-2227599:-1:exon

position:2226602:-1
position: 2226602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2226001-2226551:-1:exon

position:2226551:-1
position: 2226551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Chst2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Chst2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: carbohydrate sulfotransferase 2
translation: MSRSSPRAPPPGAPRPPRAPAPRPPRPGRRWPASPLGMKAFRRKALLLLAGYALLLLLTALNLLDHRWHREAPPRPCAPEGPAPRRAPPPAAPPPARVPGRPGPAAAAAAPAPAGAAAAPGGNGTRAGPGRARRRLVYVLTTWRSGSSFFGELFNQHPDVFFLYEPVWHVWQKLYPGDAVSLQGAARDMLSALYRCDLSVFQLYGPAGGGGRNLTTLGIFGAATNKVVCSAPLCPAGYRKEVVALVDDRVCKKCPPQRLARLEAECRRYRALAIKGVRVFDVAVLAPLLRDPALDLKVVHLVRDPRAVAASRIRSRHGLIRESLQVVRSRDPAAADRPRREPPPHAAAAAAAAGPADYHALGAMEVICHSMAATLQTALRPPDWLRGRYLAVRYEDLVGDPVRTLRRVYAFVGLPVSAAMEQFALNMTSGPAAAAKPFVVSARNATQAASAWRSALSFAQVRQVEEFCAQPMAVLGYERARGPEDVRDLSKTLLRKPRL
SIO_010081: Chst2
subclass of: SO_0000673
so part of: Chst2
location: complement(join(2226045..2226551,2226602..2227599))
location: region:2226045-2227599:-1
so has part: feature:2226602-2227599:-1:exon
so has part: feature:2226045-2226551:-1:exon

XP_048190921.1
type: Protein
SIO_000068: ncbiprotein

position:2226045:-1
position: 2226045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2226602-2227599:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2226045-2226551:-1:exon

LOC125342648
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2233059..2268226)
location: region:2233059-2268226:-1
so has part: feature:2233059-2268226:-1:exon
subclass of: SO_0000010

125342648
type: Gene
SIO_000068: ncbigene

position:2233059:-1
position: 2233059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2268226:-1
position: 2268226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2233059-2268226:-1:exon

LOC125342648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342648
product: U2 snRNP associated SURP domain containing, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334950.1
SIO_010081: LOC125342648
subclass of: SO_0000673
so part of: LOC125342648
location: complement(join(2233059..2233604,2234645..2234821,2235958..2236076,2236840..2236950,2238865..2239024,2241141..2241207,2241857..2241952,2243085..2243241,2244626..2244748,2245642..2245729,2246552..2246631,2247103..2247265,2248327..2248490,2248570..2248636,2249464..2249568,2252644..2252687,2253611..2253822,2254114..2254279,2254665..2254747,2254834..2254869,2254953..2255047,2255544..2255611,2257765..2257898,2258484..2258598,2259174..2259272,2260211..2260342,2261615..2261659,2268087..2268226))
location: region:2233059-2268226:-1
so has part: feature:2268087-2268226:-1:exon
so has part: feature:2261615-2261659:-1:exon
so has part: feature:2260211-2260342:-1:exon
so has part: feature:2259174-2259272:-1:exon
so has part: feature:2258484-2258598:-1:exon
so has part: feature:2257765-2257898:-1:exon
so has part: feature:2255544-2255611:-1:exon
so has part: feature:2254953-2255047:-1:exon
so has part: feature:2254834-2254869:-1:exon
so has part: feature:2254665-2254747:-1:exon
so has part: feature:2254114-2254279:-1:exon
so has part: feature:2253611-2253822:-1:exon
so has part: feature:2252644-2252687:-1:exon
so has part: feature:2249464-2249568:-1:exon
so has part: feature:2248570-2248636:-1:exon
so has part: feature:2248327-2248490:-1:exon
so has part: feature:2247103-2247265:-1:exon
so has part: feature:2246552-2246631:-1:exon
so has part: feature:2245642-2245729:-1:exon
so has part: feature:2244626-2244748:-1:exon
so has part: feature:2243085-2243241:-1:exon
so has part: feature:2241857-2241952:-1:exon
so has part: feature:2241141-2241207:-1:exon
so has part: feature:2238865-2239024:-1:exon
so has part: feature:2236840-2236950:-1:exon
so has part: feature:2235958-2236076:-1:exon
so has part: feature:2234645-2234821:-1:exon
so has part: feature:2233059-2233604:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2268087-2268226:-1:exon

position:2268087:-1
position: 2268087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2261615-2261659:-1:exon

position:2261615:-1
position: 2261615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2261659:-1
position: 2261659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2260211-2260342:-1:exon

position:2260211:-1
position: 2260211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2260342:-1
position: 2260342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2259174-2259272:-1:exon

position:2259174:-1
position: 2259174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2259272:-1
position: 2259272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2258484-2258598:-1:exon

position:2258484:-1
position: 2258484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2258598:-1
position: 2258598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2257765-2257898:-1:exon

position:2257765:-1
position: 2257765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2257898:-1
position: 2257898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2255544-2255611:-1:exon

position:2255544:-1
position: 2255544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2255611:-1
position: 2255611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2254953-2255047:-1:exon

position:2254953:-1
position: 2254953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2255047:-1
position: 2255047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2254834-2254869:-1:exon

position:2254834:-1
position: 2254834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2254869:-1
position: 2254869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2254665-2254747:-1:exon

position:2254665:-1
position: 2254665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2254747:-1
position: 2254747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2254114-2254279:-1:exon

position:2254114:-1
position: 2254114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2254279:-1
position: 2254279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2253611-2253822:-1:exon

position:2253611:-1
position: 2253611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2253822:-1
position: 2253822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2252644-2252687:-1:exon

position:2252644:-1
position: 2252644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2252687:-1
position: 2252687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2249464-2249568:-1:exon

position:2249464:-1
position: 2249464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2249568:-1
position: 2249568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2248570-2248636:-1:exon

position:2248570:-1
position: 2248570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2248636:-1
position: 2248636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2248327-2248490:-1:exon

position:2248327:-1
position: 2248327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2248490:-1
position: 2248490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2247103-2247265:-1:exon

position:2247103:-1
position: 2247103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2247265:-1
position: 2247265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2246552-2246631:-1:exon

position:2246552:-1
position: 2246552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2246631:-1
position: 2246631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2245642-2245729:-1:exon

position:2245642:-1
position: 2245642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2245729:-1
position: 2245729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2244626-2244748:-1:exon

position:2244626:-1
position: 2244626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2244748:-1
position: 2244748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2243085-2243241:-1:exon

position:2243085:-1
position: 2243085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2243241:-1
position: 2243241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2241857-2241952:-1:exon

position:2241857:-1
position: 2241857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2241952:-1
position: 2241952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2241141-2241207:-1:exon

position:2241141:-1
position: 2241141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2241207:-1
position: 2241207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2238865-2239024:-1:exon

position:2238865:-1
position: 2238865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2239024:-1
position: 2239024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2236840-2236950:-1:exon

position:2236840:-1
position: 2236840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2236950:-1
position: 2236950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2235958-2236076:-1:exon

position:2235958:-1
position: 2235958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2236076:-1
position: 2236076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2234645-2234821:-1:exon

position:2234645:-1
position: 2234645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2234821:-1
position: 2234821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2233059-2233604:-1:exon

position:2233604:-1
position: 2233604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125342648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342648
product: U2 snRNP associated SURP domain containing, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334951.1
SIO_010081: LOC125342648
subclass of: SO_0000673
so part of: LOC125342648
location: complement(join(2233059..2233604,2234645..2234821,2235958..2236076,2236840..2236950,2238865..2239024,2241141..2241207,2241857..2241952,2243085..2243241,2244626..2244748,2245642..2245729,2246552..2246631,2247103..2247265,2248327..2248490,2248570..2248636,2249464..2249568,2252644..2252687,2253611..2253822,2254114..2254279,2254665..2254747,2254837..2254869,2254953..2255047,2255544..2255611,2257765..2257898,2258484..2258598,2259174..2259272,2260211..2260342,2261615..2261659,2268087..2268209))
location: region:2233059-2268209:-1
so has part: feature:2268087-2268209:-1:exon
so has part: feature:2261615-2261659:-1:exon
so has part: feature:2260211-2260342:-1:exon
so has part: feature:2259174-2259272:-1:exon
so has part: feature:2258484-2258598:-1:exon
so has part: feature:2257765-2257898:-1:exon
so has part: feature:2255544-2255611:-1:exon
so has part: feature:2254953-2255047:-1:exon
so has part: feature:2254837-2254869:-1:exon
so has part: feature:2254665-2254747:-1:exon
so has part: feature:2254114-2254279:-1:exon
so has part: feature:2253611-2253822:-1:exon
so has part: feature:2252644-2252687:-1:exon
so has part: feature:2249464-2249568:-1:exon
so has part: feature:2248570-2248636:-1:exon
so has part: feature:2248327-2248490:-1:exon
so has part: feature:2247103-2247265:-1:exon
so has part: feature:2246552-2246631:-1:exon
so has part: feature:2245642-2245729:-1:exon
so has part: feature:2244626-2244748:-1:exon
so has part: feature:2243085-2243241:-1:exon
so has part: feature:2241857-2241952:-1:exon
so has part: feature:2241141-2241207:-1:exon
so has part: feature:2238865-2239024:-1:exon
so has part: feature:2236840-2236950:-1:exon
so has part: feature:2235958-2236076:-1:exon
so has part: feature:2234645-2234821:-1:exon
so has part: feature:2233059-2233604:-1:exon

position:2268209:-1
position: 2268209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2268087-2268209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2261615-2261659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2260211-2260342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2259174-2259272:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2258484-2258598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2257765-2257898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2255544-2255611:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2254953-2255047:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2254837-2254869:-1:exon

position:2254837:-1
position: 2254837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2254665-2254747:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2254114-2254279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2253611-2253822:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2252644-2252687:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2249464-2249568:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2248570-2248636:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2248327-2248490:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2247103-2247265:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2246552-2246631:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2245642-2245729:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2244626-2244748:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2243085-2243241:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2241857-2241952:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2241141-2241207:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2238865-2239024:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2236840-2236950:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2235958-2236076:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2234645-2234821:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2233059-2233604:-1:exon

LOC125342648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342648
product: U2 snRNP associated SURP domain containing, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334952.1
SIO_010081: LOC125342648
subclass of: SO_0000673
so part of: LOC125342648
location: complement(join(2233059..2233604,2234645..2234821,2235958..2236076,2236840..2236950,2238865..2239024,2241141..2241207,2241857..2241952,2243085..2243241,2244626..2244748,2245642..2245729,2246552..2246631,2247103..2247265,2248327..2248490,2248570..2248636,2249464..2249568,2252644..2252687,2253611..2253822,2254114..2254279,2254665..2254747,2254834..2254869,2254953..2255047,2255544..2255611,2257765..2257895,2258484..2258598,2259174..2259272,2260211..2260342,2261615..2261659,2268087..2268180))
location: region:2233059-2268180:-1
so has part: feature:2268087-2268180:-1:exon
so has part: feature:2261615-2261659:-1:exon
so has part: feature:2260211-2260342:-1:exon
so has part: feature:2259174-2259272:-1:exon
so has part: feature:2258484-2258598:-1:exon
so has part: feature:2257765-2257895:-1:exon
so has part: feature:2255544-2255611:-1:exon
so has part: feature:2254953-2255047:-1:exon
so has part: feature:2254834-2254869:-1:exon
so has part: feature:2254665-2254747:-1:exon
so has part: feature:2254114-2254279:-1:exon
so has part: feature:2253611-2253822:-1:exon
so has part: feature:2252644-2252687:-1:exon
so has part: feature:2249464-2249568:-1:exon
so has part: feature:2248570-2248636:-1:exon
so has part: feature:2248327-2248490:-1:exon
so has part: feature:2247103-2247265:-1:exon
so has part: feature:2246552-2246631:-1:exon
so has part: feature:2245642-2245729:-1:exon
so has part: feature:2244626-2244748:-1:exon
so has part: feature:2243085-2243241:-1:exon
so has part: feature:2241857-2241952:-1:exon
so has part: feature:2241141-2241207:-1:exon
so has part: feature:2238865-2239024:-1:exon
so has part: feature:2236840-2236950:-1:exon
so has part: feature:2235958-2236076:-1:exon
so has part: feature:2234645-2234821:-1:exon
so has part: feature:2233059-2233604:-1:exon

position:2268180:-1
position: 2268180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2268087-2268180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2261615-2261659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2260211-2260342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2259174-2259272:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2258484-2258598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2257765-2257895:-1:exon

position:2257895:-1
position: 2257895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2255544-2255611:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2254953-2255047:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2254834-2254869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2254665-2254747:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2254114-2254279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2253611-2253822:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2252644-2252687:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2249464-2249568:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2248570-2248636:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2248327-2248490:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2247103-2247265:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2246552-2246631:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2245642-2245729:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2244626-2244748:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2243085-2243241:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2241857-2241952:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2241141-2241207:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2238865-2239024:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2236840-2236950:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2235958-2236076:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2234645-2234821:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2233059-2233604:-1:exon

LOC125342648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342648
product: U2 snRNP associated SURP domain containing, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334953.1
SIO_010081: LOC125342648
subclass of: SO_0000673
so part of: LOC125342648
location: complement(join(2233059..2233604,2234645..2234821,2235958..2236076,2236840..2236950,2238865..2239024,2241141..2241207,2241857..2241952,2243085..2243241,2244626..2244748,2245642..2245729,2246552..2246631,2247103..2247265,2248327..2248490,2248570..2248636,2249464..2249568,2253611..2253817))
location: region:2233059-2253817:-1
so has part: feature:2253611-2253817:-1:exon
so has part: feature:2249464-2249568:-1:exon
so has part: feature:2248570-2248636:-1:exon
so has part: feature:2248327-2248490:-1:exon
so has part: feature:2247103-2247265:-1:exon
so has part: feature:2246552-2246631:-1:exon
so has part: feature:2245642-2245729:-1:exon
so has part: feature:2244626-2244748:-1:exon
so has part: feature:2243085-2243241:-1:exon
so has part: feature:2241857-2241952:-1:exon
so has part: feature:2241141-2241207:-1:exon
so has part: feature:2238865-2239024:-1:exon
so has part: feature:2236840-2236950:-1:exon
so has part: feature:2235958-2236076:-1:exon
so has part: feature:2234645-2234821:-1:exon
so has part: feature:2233059-2233604:-1:exon

position:2253817:-1
position: 2253817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2253611-2253817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2249464-2249568:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2248570-2248636:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2248327-2248490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2247103-2247265:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2246552-2246631:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2245642-2245729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2244626-2244748:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2243085-2243241:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2241857-2241952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2241141-2241207:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2238865-2239024:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2236840-2236950:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2235958-2236076:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2234645-2234821:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2233059-2233604:-1:exon

LOC125342648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U2 snRNP-associated SURP motif-containing protein isoform X3
translation: MADKTPGGSQKASSKARSSDPHSSGSSDAHMDASGPSDSDVPSRTRPKSPRKHSYRNDSARESLCDSPHQNLSRPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEFLAAFEGSDGNKVKTFVRGGVVNAAKEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDVPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKEAEDVPDDLDGAPIEEELDGAPLEDVDGVPIDAAPMDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMAESKLSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSNSPSPSRSSSGRRVKSPSPKSERSERPERSHKESSRSRPSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKNKH
SIO_010081: LOC125342648
subclass of: SO_0000673
so part of: LOC125342648
location: complement(join(2233466..2233604,2234645..2234821,2235958..2236076,2236840..2236950,2238865..2239024,2241141..2241207,2241857..2241952,2243085..2243241,2244626..2244748,2245642..2245729,2246552..2246631,2247103..2247265,2248327..2248490,2248570..2248636,2249464..2249568,2252644..2252687,2253611..2253822,2254114..2254279,2254665..2254747,2254834..2254869,2254953..2255047,2255544..2255611,2257765..2257895,2258484..2258598,2259174..2259272,2260211..2260342,2261615..2261659,2268087..2268131))
location: region:2233466-2268131:-1
so has part: feature:2268087-2268131:-1:exon
so has part: feature:2261615-2261659:-1:exon
so has part: feature:2260211-2260342:-1:exon
so has part: feature:2259174-2259272:-1:exon
so has part: feature:2258484-2258598:-1:exon
so has part: feature:2257765-2257895:-1:exon
so has part: feature:2255544-2255611:-1:exon
so has part: feature:2254953-2255047:-1:exon
so has part: feature:2254834-2254869:-1:exon
so has part: feature:2254665-2254747:-1:exon
so has part: feature:2254114-2254279:-1:exon
so has part: feature:2253611-2253822:-1:exon
so has part: feature:2252644-2252687:-1:exon
so has part: feature:2249464-2249568:-1:exon
so has part: feature:2248570-2248636:-1:exon
so has part: feature:2248327-2248490:-1:exon
so has part: feature:2247103-2247265:-1:exon
so has part: feature:2246552-2246631:-1:exon
so has part: feature:2245642-2245729:-1:exon
so has part: feature:2244626-2244748:-1:exon
so has part: feature:2243085-2243241:-1:exon
so has part: feature:2241857-2241952:-1:exon
so has part: feature:2241141-2241207:-1:exon
so has part: feature:2238865-2239024:-1:exon
so has part: feature:2236840-2236950:-1:exon
so has part: feature:2235958-2236076:-1:exon
so has part: feature:2234645-2234821:-1:exon
so has part: feature:2233466-2233604:-1:exon

XP_048190909.1
type: Protein
SIO_000068: ncbiprotein

position:2233466:-1
position: 2233466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2268131:-1
position: 2268131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2268087-2268131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2261615-2261659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2260211-2260342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2259174-2259272:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2258484-2258598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2257765-2257895:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2255544-2255611:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2254953-2255047:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2254834-2254869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2254665-2254747:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2254114-2254279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2253611-2253822:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2252644-2252687:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2249464-2249568:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2248570-2248636:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2248327-2248490:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2247103-2247265:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2246552-2246631:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2245642-2245729:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2244626-2244748:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2243085-2243241:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2241857-2241952:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2241141-2241207:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2238865-2239024:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2236840-2236950:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2235958-2236076:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2234645-2234821:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2233466-2233604:-1:exon

LOC125342648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U2 snRNP-associated SURP motif-containing protein isoform X2
translation: MADKTPGGSQKASSKARSSDPHSSGSSDAHMDASGPSDSDVPSRTRPKSPRKHSYRNDSARESLCDSPHQNLSRPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEFLAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDVPSRRNRSSVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKEAEDVPDDLDGAPIEEELDGAPLEDVDGVPIDAAPMDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMAESKLSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSNSPSPSRSSSGRRVKSPSPKSERSERPERSHKESSRSRPSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKNKH
SIO_010081: LOC125342648
subclass of: SO_0000673
so part of: LOC125342648
location: complement(join(2233466..2233604,2234645..2234821,2235958..2236076,2236840..2236950,2238865..2239024,2241141..2241207,2241857..2241952,2243085..2243241,2244626..2244748,2245642..2245729,2246552..2246631,2247103..2247265,2248327..2248490,2248570..2248636,2249464..2249568,2252644..2252687,2253611..2253822,2254114..2254279,2254665..2254747,2254837..2254869,2254953..2255047,2255544..2255611,2257765..2257898,2258484..2258598,2259174..2259272,2260211..2260342,2261615..2261659,2268087..2268131))
location: region:2233466-2268131:-1
so has part: feature:2268087-2268131:-1:exon
so has part: feature:2261615-2261659:-1:exon
so has part: feature:2260211-2260342:-1:exon
so has part: feature:2259174-2259272:-1:exon
so has part: feature:2258484-2258598:-1:exon
so has part: feature:2257765-2257898:-1:exon
so has part: feature:2255544-2255611:-1:exon
so has part: feature:2254953-2255047:-1:exon
so has part: feature:2254837-2254869:-1:exon
so has part: feature:2254665-2254747:-1:exon
so has part: feature:2254114-2254279:-1:exon
so has part: feature:2253611-2253822:-1:exon
so has part: feature:2252644-2252687:-1:exon
so has part: feature:2249464-2249568:-1:exon
so has part: feature:2248570-2248636:-1:exon
so has part: feature:2248327-2248490:-1:exon
so has part: feature:2247103-2247265:-1:exon
so has part: feature:2246552-2246631:-1:exon
so has part: feature:2245642-2245729:-1:exon
so has part: feature:2244626-2244748:-1:exon
so has part: feature:2243085-2243241:-1:exon
so has part: feature:2241857-2241952:-1:exon
so has part: feature:2241141-2241207:-1:exon
so has part: feature:2238865-2239024:-1:exon
so has part: feature:2236840-2236950:-1:exon
so has part: feature:2235958-2236076:-1:exon
so has part: feature:2234645-2234821:-1:exon
so has part: feature:2233466-2233604:-1:exon

XP_048190908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2268087-2268131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2261615-2261659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2260211-2260342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2259174-2259272:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2258484-2258598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2257765-2257898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2255544-2255611:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2254953-2255047:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2254837-2254869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2254665-2254747:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2254114-2254279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2253611-2253822:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2252644-2252687:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2249464-2249568:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2248570-2248636:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2248327-2248490:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2247103-2247265:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2246552-2246631:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2245642-2245729:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2244626-2244748:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2243085-2243241:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2241857-2241952:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2241141-2241207:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2238865-2239024:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2236840-2236950:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2235958-2236076:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2234645-2234821:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2233466-2233604:-1:exon

LOC125342648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U2 snRNP-associated SURP motif-containing protein isoform X1
translation: MADKTPGGSQKASSKARSSDPHSSGSSDAHMDASGPSDSDVPSRTRPKSPRKHSYRNDSARESLCDSPHQNLSRPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEFLAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDVPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKEAEDVPDDLDGAPIEEELDGAPLEDVDGVPIDAAPMDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMAESKLSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSNSPSPSRSSSGRRVKSPSPKSERSERPERSHKESSRSRPSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKNKH
SIO_010081: LOC125342648
subclass of: SO_0000673
so part of: LOC125342648
location: complement(join(2233466..2233604,2234645..2234821,2235958..2236076,2236840..2236950,2238865..2239024,2241141..2241207,2241857..2241952,2243085..2243241,2244626..2244748,2245642..2245729,2246552..2246631,2247103..2247265,2248327..2248490,2248570..2248636,2249464..2249568,2252644..2252687,2253611..2253822,2254114..2254279,2254665..2254747,2254834..2254869,2254953..2255047,2255544..2255611,2257765..2257898,2258484..2258598,2259174..2259272,2260211..2260342,2261615..2261659,2268087..2268131))
location: region:2233466-2268131:-1
so has part: feature:2268087-2268131:-1:exon
so has part: feature:2261615-2261659:-1:exon
so has part: feature:2260211-2260342:-1:exon
so has part: feature:2259174-2259272:-1:exon
so has part: feature:2258484-2258598:-1:exon
so has part: feature:2257765-2257898:-1:exon
so has part: feature:2255544-2255611:-1:exon
so has part: feature:2254953-2255047:-1:exon
so has part: feature:2254834-2254869:-1:exon
so has part: feature:2254665-2254747:-1:exon
so has part: feature:2254114-2254279:-1:exon
so has part: feature:2253611-2253822:-1:exon
so has part: feature:2252644-2252687:-1:exon
so has part: feature:2249464-2249568:-1:exon
so has part: feature:2248570-2248636:-1:exon
so has part: feature:2248327-2248490:-1:exon
so has part: feature:2247103-2247265:-1:exon
so has part: feature:2246552-2246631:-1:exon
so has part: feature:2245642-2245729:-1:exon
so has part: feature:2244626-2244748:-1:exon
so has part: feature:2243085-2243241:-1:exon
so has part: feature:2241857-2241952:-1:exon
so has part: feature:2241141-2241207:-1:exon
so has part: feature:2238865-2239024:-1:exon
so has part: feature:2236840-2236950:-1:exon
so has part: feature:2235958-2236076:-1:exon
so has part: feature:2234645-2234821:-1:exon
so has part: feature:2233466-2233604:-1:exon

XP_048190907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2268087-2268131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2261615-2261659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2260211-2260342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2259174-2259272:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2258484-2258598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2257765-2257898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2255544-2255611:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2254953-2255047:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2254834-2254869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2254665-2254747:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2254114-2254279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2253611-2253822:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2252644-2252687:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2249464-2249568:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2248570-2248636:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2248327-2248490:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2247103-2247265:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2246552-2246631:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2245642-2245729:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2244626-2244748:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2243085-2243241:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2241857-2241952:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2241141-2241207:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2238865-2239024:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2236840-2236950:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2235958-2236076:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2234645-2234821:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2233466-2233604:-1:exon

LOC125342648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U2 snRNP-associated SURP motif-containing protein isoform X4
translation: MRSRESGSKTPTPPCCRRPKTRRTSRRNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKEAEDVPDDLDGAPIEEELDGAPLEDVDGVPIDAAPMDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMAESKLSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSNSPSPSRSSSGRRVKSPSPKSERSERPERSHKESSRSRPSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKNKH
SIO_010081: LOC125342648
subclass of: SO_0000673
so part of: LOC125342648
location: complement(join(2233466..2233604,2234645..2234821,2235958..2236076,2236840..2236950,2238865..2239024,2241141..2241207,2241857..2241952,2243085..2243241,2244626..2244748,2245642..2245729,2246552..2246631,2247103..2247265,2248327..2248490,2248570..2248636,2249464..2249568,2253611..2253690))
location: region:2233466-2253690:-1
so has part: feature:2253611-2253690:-1:exon
so has part: feature:2249464-2249568:-1:exon
so has part: feature:2248570-2248636:-1:exon
so has part: feature:2248327-2248490:-1:exon
so has part: feature:2247103-2247265:-1:exon
so has part: feature:2246552-2246631:-1:exon
so has part: feature:2245642-2245729:-1:exon
so has part: feature:2244626-2244748:-1:exon
so has part: feature:2243085-2243241:-1:exon
so has part: feature:2241857-2241952:-1:exon
so has part: feature:2241141-2241207:-1:exon
so has part: feature:2238865-2239024:-1:exon
so has part: feature:2236840-2236950:-1:exon
so has part: feature:2235958-2236076:-1:exon
so has part: feature:2234645-2234821:-1:exon
so has part: feature:2233466-2233604:-1:exon

XP_048190910.1
type: Protein
SIO_000068: ncbiprotein

position:2253690:-1
position: 2253690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2253611-2253690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2249464-2249568:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2248570-2248636:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2248327-2248490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2247103-2247265:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2246552-2246631:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2245642-2245729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2244626-2244748:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2243085-2243241:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2241857-2241952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2241141-2241207:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2238865-2239024:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2236840-2236950:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2235958-2236076:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2234645-2234821:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2233466-2233604:-1:exon

Paqr9
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Paqr9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2276134..2277444
location: region:2276134-2277444:1
so has part: feature:2276134-2277444:1:exon
subclass of: SO_0000010

125342314
type: Gene
SIO_000068: ncbigene

position:2276134:1
position: 2276134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2277444:1
position: 2277444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2276134-2277444:1:exon

Paqr9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Paqr9
product: progestin and adipoQ receptor family member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334441.1
SIO_010081: Paqr9
subclass of: SO_0000673
so part of: Paqr9
location: join(2276134..2276857,2276969..2277444)
location: region:2276134-2277444:1
so has part: feature:2276134-2276857:1:exon
so has part: feature:2276969-2277444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2276134-2276857:1:exon

position:2276857:1
position: 2276857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2276969-2277444:1:exon

position:2276969:1
position: 2276969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Paqr9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Paqr9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor epsilon
translation: MARRPQPRARPEEPEEPQPGPGPAPPPGARRSPPLLRWDEVPEDLVEGFILSGYRRLPCTARECLASVLAPTNETLNFWTHFVPLLLFAGRFGRLLLRGLPPGGEDEADGAGGAGGGDALPAGHPALRPLWCYASGVLLTLAASCAAHVFSCLSRRLRAACFYLDYACISYYGFGSTVAYHHYLLPGLRLLDARELAAAARRRLGWSPDCARLLAAYRALVLPAAFALALACTAACCRSRRPRARRPPALRTLVFALPLSMAGPIALEAWLFDLGARQPALCRRFHRRYLWLLAAAFVNLTKIPERLRPGRFDVVGHSHQLFHLLTALSIYEQAQYVEDGLRRALRAPAPHAPAPTLAATAGAMLLLALCLGLVVRAFLAREAPAAVEGPGPGGPRRGQ
SIO_010081: Paqr9
subclass of: SO_0000673
so part of: Paqr9
location: join(2276134..2276857,2276969..2277444)
location: region:2276134-2277444:1
so has part: feature:2276134-2276857:1:exon
so has part: feature:2276969-2277444:1:exon

XP_048190398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2276134-2276857:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2276969-2277444:1:exon

Pcolce2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Pcolce2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2299309..2318227
location: region:2299309-2318227:1
so has part: feature:2299309-2318227:1:exon
subclass of: SO_0000010

125342653
type: Gene
SIO_000068: ncbigene

position:2299309:1
position: 2299309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2318227:1
position: 2318227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2299309-2318227:1:exon

Pcolce2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pcolce2
product: procollagen C-endopeptidase enhancer 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334961.1
SIO_010081: Pcolce2
subclass of: SO_0000673
so part of: Pcolce2
location: join(2299309..2299412,2300488..2300596,2310206..2310461,2310770..2310894,2312599..2312735,2313195..2313349,2314257..2314340,2316347..2316514,2317726..2318227)
location: region:2299309-2318227:1
so has part: feature:2299309-2299412:1:exon
so has part: feature:2300488-2300596:1:exon
so has part: feature:2310206-2310461:1:exon
so has part: feature:2310770-2310894:1:exon
so has part: feature:2312599-2312735:1:exon
so has part: feature:2313195-2313349:1:exon
so has part: feature:2314257-2314340:1:exon
so has part: feature:2316347-2316514:1:exon
so has part: feature:2317726-2318227:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2299309-2299412:1:exon

position:2299412:1
position: 2299412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2300488-2300596:1:exon

position:2300488:1
position: 2300488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2300596:1
position: 2300596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2310206-2310461:1:exon

position:2310206:1
position: 2310206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2310461:1
position: 2310461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2310770-2310894:1:exon

position:2310770:1
position: 2310770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2310894:1
position: 2310894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2312599-2312735:1:exon

position:2312599:1
position: 2312599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2312735:1
position: 2312735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2313195-2313349:1:exon

position:2313195:1
position: 2313195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2313349:1
position: 2313349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2314257-2314340:1:exon

position:2314257:1
position: 2314257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2314340:1
position: 2314340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2316347-2316514:1:exon

position:2316347:1
position: 2316347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2316514:1
position: 2316514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2317726-2318227:1:exon

position:2317726:1
position: 2317726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pcolce2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pcolce2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: procollagen C-endopeptidase enhancer 2
translation: MGGAGARRPLCPLLLLAAAAAAAARVSRVQQPPERPVFTCGGVLTGESGFLGSEGFPGVYPPNSKCTWKITVPEGKVVVLHFRFLDLESDNLCRYDFVDVYSGHAHGQRLGRFCGTFRPGALVSNGNKMMVQMVSDANTAGNGFMAAYSAAQPHERGDLYCGGRLEKPSGSFKTPNWPDRDYPAGVTCVWHITAPKNKLIELKFEKFDLERDNYCRYDYVAVFNGGEVNDANRIGKFCGDSPPAPIVSEKNELLIQFLSDLSLTADGFIGHYKFRPKKLPTTPAPPATTAYPVTTGLKPTVALCQQKCRRSGTLESNYCSSNFVLTGTVITTVTRGGSLHATVSIINIYKEGNLPIQQAGKNMSAKVTVVCKQCPLLRRGLNYIIMGQVGEDGQGKVTPNNFVMMFKTKNQKVLAALENKRC
SIO_010081: Pcolce2
subclass of: SO_0000673
so part of: Pcolce2
location: join(2299309..2299412,2300488..2300596,2310206..2310461,2310770..2310894,2312599..2312735,2313195..2313349,2314257..2314340,2316347..2316514,2317726..2317856)
location: region:2299309-2317856:1
so has part: feature:2299309-2299412:1:exon
so has part: feature:2300488-2300596:1:exon
so has part: feature:2310206-2310461:1:exon
so has part: feature:2310770-2310894:1:exon
so has part: feature:2312599-2312735:1:exon
so has part: feature:2313195-2313349:1:exon
so has part: feature:2314257-2314340:1:exon
so has part: feature:2316347-2316514:1:exon
so has part: feature:2317726-2317856:1:exon

XP_048190918.1
type: Protein
SIO_000068: ncbiprotein

position:2317856:1
position: 2317856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2299309-2299412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2300488-2300596:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2310206-2310461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2310770-2310894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2312599-2312735:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2313195-2313349:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2314257-2314340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2316347-2316514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2317726-2317856:1:exon

Trpc1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Trpc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2321965..2353795)
location: region:2321965-2353795:-1
so has part: feature:2321965-2353795:-1:exon
subclass of: SO_0000010

125342650
type: Gene
SIO_000068: ncbigene

position:2321965:-1
position: 2321965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2353795:-1
position: 2353795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2321965-2353795:-1:exon

Trpc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Trpc1
product: transient receptor potential cation channel subfamily C member 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334955.1
SIO_010081: Trpc1
subclass of: SO_0000673
so part of: Trpc1
location: complement(join(2321965..2323800,2326070..2326264,2326531..2326732,2328040..2328215,2329473..2329616,2331209..2331348,2332978..2333314,2336243..2336438,2337027..2337158,2338488..2338690,2347556..2347710,2353103..2353795))
location: region:2321965-2353795:-1
so has part: feature:2353103-2353795:-1:exon
so has part: feature:2347556-2347710:-1:exon
so has part: feature:2338488-2338690:-1:exon
so has part: feature:2337027-2337158:-1:exon
so has part: feature:2336243-2336438:-1:exon
so has part: feature:2332978-2333314:-1:exon
so has part: feature:2331209-2331348:-1:exon
so has part: feature:2329473-2329616:-1:exon
so has part: feature:2328040-2328215:-1:exon
so has part: feature:2326531-2326732:-1:exon
so has part: feature:2326070-2326264:-1:exon
so has part: feature:2321965-2323800:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2353103-2353795:-1:exon

position:2353103:-1
position: 2353103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2347556-2347710:-1:exon

position:2347556:-1
position: 2347556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2347710:-1
position: 2347710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2338488-2338690:-1:exon

position:2338488:-1
position: 2338488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2338690:-1
position: 2338690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2337027-2337158:-1:exon

position:2337027:-1
position: 2337027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2337158:-1
position: 2337158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2336243-2336438:-1:exon

position:2336243:-1
position: 2336243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2336438:-1
position: 2336438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2332978-2333314:-1:exon

position:2332978:-1
position: 2332978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2333314:-1
position: 2333314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2331209-2331348:-1:exon

position:2331209:-1
position: 2331209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2331348:-1
position: 2331348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2329473-2329616:-1:exon

position:2329473:-1
position: 2329473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2329616:-1
position: 2329616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2328040-2328215:-1:exon

position:2328040:-1
position: 2328040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2328215:-1
position: 2328215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2326531-2326732:-1:exon

position:2326531:-1
position: 2326531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2326732:-1
position: 2326732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2326070-2326264:-1:exon

position:2326070:-1
position: 2326070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2326264:-1
position: 2326264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2321965-2323800:-1:exon

position:2323800:-1
position: 2323800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Trpc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Trpc1
product: transient receptor potential cation channel subfamily C member 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334954.1
SIO_010081: Trpc1
subclass of: SO_0000673
so part of: Trpc1
location: complement(join(2321965..2323800,2326070..2326264,2326531..2326732,2328040..2328215,2329473..2329616,2331209..2331348,2332978..2333314,2336243..2336438,2337027..2337158,2338488..2338690,2342254..2342355,2347556..2347710,2353103..2353795))
location: region:2321965-2353795:-1
so has part: feature:2353103-2353795:-1:exon
so has part: feature:2347556-2347710:-1:exon
so has part: feature:2342254-2342355:-1:exon
so has part: feature:2338488-2338690:-1:exon
so has part: feature:2337027-2337158:-1:exon
so has part: feature:2336243-2336438:-1:exon
so has part: feature:2332978-2333314:-1:exon
so has part: feature:2331209-2331348:-1:exon
so has part: feature:2329473-2329616:-1:exon
so has part: feature:2328040-2328215:-1:exon
so has part: feature:2326531-2326732:-1:exon
so has part: feature:2326070-2326264:-1:exon
so has part: feature:2321965-2323800:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2353103-2353795:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2347556-2347710:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2342254-2342355:-1:exon

position:2342254:-1
position: 2342254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2342355:-1
position: 2342355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2338488-2338690:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2337027-2337158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2336243-2336438:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2332978-2333314:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2331209-2331348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2329473-2329616:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2328040-2328215:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2326531-2326732:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2326070-2326264:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2321965-2323800:-1:exon

Trpc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Trpc1
product: transient receptor potential cation channel subfamily C member 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334957.1
SIO_010081: Trpc1
subclass of: SO_0000673
so part of: Trpc1
location: complement(join(2321965..2323800,2326070..2326264,2326531..2326732,2328040..2328215,2329473..2329616,2331209..2331348,2332978..2333314,2336243..2336438,2337027..2337158,2338488..2338690,2353103..2353237))
location: region:2321965-2353237:-1
so has part: feature:2353103-2353237:-1:exon
so has part: feature:2338488-2338690:-1:exon
so has part: feature:2337027-2337158:-1:exon
so has part: feature:2336243-2336438:-1:exon
so has part: feature:2332978-2333314:-1:exon
so has part: feature:2331209-2331348:-1:exon
so has part: feature:2329473-2329616:-1:exon
so has part: feature:2328040-2328215:-1:exon
so has part: feature:2326531-2326732:-1:exon
so has part: feature:2326070-2326264:-1:exon
so has part: feature:2321965-2323800:-1:exon

position:2353237:-1
position: 2353237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2353103-2353237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2338488-2338690:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2337027-2337158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2336243-2336438:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2332978-2333314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2331209-2331348:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2329473-2329616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2328040-2328215:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2326531-2326732:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2326070-2326264:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2321965-2323800:-1:exon

Trpc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Trpc1
product: transient receptor potential cation channel subfamily C member 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334956.1
SIO_010081: Trpc1
subclass of: SO_0000673
so part of: Trpc1
location: complement(join(2321965..2323800,2326070..2326264,2326531..2326732,2328040..2328215,2329473..2329616,2331209..2331348,2332978..2333314,2336243..2336438,2337027..2337158,2338488..2338690,2342254..2342355,2345827..2345964))
location: region:2321965-2345964:-1
so has part: feature:2345827-2345964:-1:exon
so has part: feature:2342254-2342355:-1:exon
so has part: feature:2338488-2338690:-1:exon
so has part: feature:2337027-2337158:-1:exon
so has part: feature:2336243-2336438:-1:exon
so has part: feature:2332978-2333314:-1:exon
so has part: feature:2331209-2331348:-1:exon
so has part: feature:2329473-2329616:-1:exon
so has part: feature:2328040-2328215:-1:exon
so has part: feature:2326531-2326732:-1:exon
so has part: feature:2326070-2326264:-1:exon
so has part: feature:2321965-2323800:-1:exon

position:2345964:-1
position: 2345964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2345827-2345964:-1:exon

position:2345827:-1
position: 2345827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2342254-2342355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2338488-2338690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2337027-2337158:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2336243-2336438:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2332978-2333314:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2331209-2331348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2329473-2329616:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2328040-2328215:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2326531-2326732:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2326070-2326264:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2321965-2323800:-1:exon

Trpc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Trpc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short transient receptor potential channel 1 isoform X2
translation: MMAALYPSTDLPGVPSSSPPPSPSASPHEVMALKDVREVKEENTLNEKLFLLACDKGDYYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLMVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDSADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSVLGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYTISSLSKWICSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQRMQSTDQATVENLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
SIO_010081: Trpc1
subclass of: SO_0000673
so part of: Trpc1
location: complement(join(2323573..2323800,2326070..2326264,2326531..2326732,2328040..2328215,2329473..2329616,2331209..2331348,2332978..2333314,2336243..2336438,2337027..2337158,2338488..2338690,2347556..2347710,2353103..2353271))
location: region:2323573-2353271:-1
so has part: feature:2353103-2353271:-1:exon
so has part: feature:2347556-2347710:-1:exon
so has part: feature:2338488-2338690:-1:exon
so has part: feature:2337027-2337158:-1:exon
so has part: feature:2336243-2336438:-1:exon
so has part: feature:2332978-2333314:-1:exon
so has part: feature:2331209-2331348:-1:exon
so has part: feature:2329473-2329616:-1:exon
so has part: feature:2328040-2328215:-1:exon
so has part: feature:2326531-2326732:-1:exon
so has part: feature:2326070-2326264:-1:exon
so has part: feature:2323573-2323800:-1:exon

XP_048190912.1
type: Protein
SIO_000068: ncbiprotein

position:2323573:-1
position: 2323573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2353271:-1
position: 2353271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2353103-2353271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2347556-2347710:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2338488-2338690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2337027-2337158:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2336243-2336438:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2332978-2333314:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2331209-2331348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2329473-2329616:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2328040-2328215:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2326531-2326732:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2326070-2326264:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2323573-2323800:-1:exon

Trpc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Trpc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short transient receptor potential channel 1 isoform X1
translation: MMAALYPSTDLPGVPSSSPPPSPSASPHEVMALKDVREVKEENTLNEKLFLLACDKGDYYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAIDSEVVGAVDILLSHRSKPSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLMVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDSADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSVLGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYTISSLSKWICSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQRMQSTDQATVENLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
SIO_010081: Trpc1
subclass of: SO_0000673
so part of: Trpc1
location: complement(join(2323573..2323800,2326070..2326264,2326531..2326732,2328040..2328215,2329473..2329616,2331209..2331348,2332978..2333314,2336243..2336438,2337027..2337158,2338488..2338690,2342254..2342355,2347556..2347710,2353103..2353271))
location: region:2323573-2353271:-1
so has part: feature:2353103-2353271:-1:exon
so has part: feature:2347556-2347710:-1:exon
so has part: feature:2342254-2342355:-1:exon
so has part: feature:2338488-2338690:-1:exon
so has part: feature:2337027-2337158:-1:exon
so has part: feature:2336243-2336438:-1:exon
so has part: feature:2332978-2333314:-1:exon
so has part: feature:2331209-2331348:-1:exon
so has part: feature:2329473-2329616:-1:exon
so has part: feature:2328040-2328215:-1:exon
so has part: feature:2326531-2326732:-1:exon
so has part: feature:2326070-2326264:-1:exon
so has part: feature:2323573-2323800:-1:exon

XP_048190911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2353103-2353271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2347556-2347710:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2342254-2342355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2338488-2338690:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2337027-2337158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2336243-2336438:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2332978-2333314:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2331209-2331348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2329473-2329616:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2328040-2328215:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2326531-2326732:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2326070-2326264:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2323573-2323800:-1:exon

Trpc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Trpc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short transient receptor potential channel 1 isoform X3
translation: MERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLMVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDSADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSVLGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYTISSLSKWICSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQRMQSTDQATVENLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
SIO_010081: Trpc1
subclass of: SO_0000673
so part of: Trpc1
location: complement(join(2323573..2323800,2326070..2326264,2326531..2326732,2328040..2328215,2329473..2329616,2331209..2331348,2332978..2333314,2336243..2336438,2337027..2337158,2338488..2338684))
location: region:2323573-2338684:-1
so has part: feature:2338488-2338684:-1:exon
so has part: feature:2337027-2337158:-1:exon
so has part: feature:2336243-2336438:-1:exon
so has part: feature:2332978-2333314:-1:exon
so has part: feature:2331209-2331348:-1:exon
so has part: feature:2329473-2329616:-1:exon
so has part: feature:2328040-2328215:-1:exon
so has part: feature:2326531-2326732:-1:exon
so has part: feature:2326070-2326264:-1:exon
so has part: feature:2323573-2323800:-1:exon

XP_048190913.1
type: Protein
SIO_000068: ncbiprotein

position:2338684:-1
position: 2338684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2338488-2338684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2337027-2337158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2336243-2336438:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2332978-2333314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2331209-2331348:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2329473-2329616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2328040-2328215:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2326531-2326732:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2326070-2326264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2323573-2323800:-1:exon

Trpc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Trpc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short transient receptor potential channel 1 isoform X3
translation: MERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLMVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDSADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSVLGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYTISSLSKWICSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQRMQSTDQATVENLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
SIO_010081: Trpc1
subclass of: SO_0000673
so part of: Trpc1
location: complement(join(2323573..2323800,2326070..2326264,2326531..2326732,2328040..2328215,2329473..2329616,2331209..2331348,2332978..2333314,2336243..2336438,2337027..2337158,2338488..2338684))
location: region:2323573-2338684:-1
so has part: feature:2338488-2338684:-1:exon
so has part: feature:2337027-2337158:-1:exon
so has part: feature:2336243-2336438:-1:exon
so has part: feature:2332978-2333314:-1:exon
so has part: feature:2331209-2331348:-1:exon
so has part: feature:2329473-2329616:-1:exon
so has part: feature:2328040-2328215:-1:exon
so has part: feature:2326531-2326732:-1:exon
so has part: feature:2326070-2326264:-1:exon
so has part: feature:2323573-2323800:-1:exon

XP_048190914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2338488-2338684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2337027-2337158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2336243-2336438:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2332978-2333314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2331209-2331348:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2329473-2329616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2328040-2328215:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2326531-2326732:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2326070-2326264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2323573-2323800:-1:exon

Pls1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Pls1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2355463..2399132)
location: region:2355463-2399132:-1
so has part: feature:2355463-2399132:-1:exon
subclass of: SO_0000010

125342651
type: Gene
SIO_000068: ncbigene

position:2355463:-1
position: 2355463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2399132:-1
position: 2399132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2355463-2399132:-1:exon

Pls1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pls1
product: plastin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048334959.1
SIO_010081: Pls1
subclass of: SO_0000673
so part of: Pls1
location: complement(join(2355463..2356227,2356577..2356701,2359644..2359767,2360551..2360684,2364358..2364472,2366774..2366852,2372400..2372595,2374290..2374382,2374787..2374929,2375036..2375201,2376176..2376257,2378164..2378296,2379707..2379836,2380488..2380651,2383824..2383934,2399078..2399132))
location: region:2355463-2399132:-1
so has part: feature:2399078-2399132:-1:exon
so has part: feature:2383824-2383934:-1:exon
so has part: feature:2380488-2380651:-1:exon
so has part: feature:2379707-2379836:-1:exon
so has part: feature:2378164-2378296:-1:exon
so has part: feature:2376176-2376257:-1:exon
so has part: feature:2375036-2375201:-1:exon
so has part: feature:2374787-2374929:-1:exon
so has part: feature:2374290-2374382:-1:exon
so has part: feature:2372400-2372595:-1:exon
so has part: feature:2366774-2366852:-1:exon
so has part: feature:2364358-2364472:-1:exon
so has part: feature:2360551-2360684:-1:exon
so has part: feature:2359644-2359767:-1:exon
so has part: feature:2356577-2356701:-1:exon
so has part: feature:2355463-2356227:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2399078-2399132:-1:exon

position:2399078:-1
position: 2399078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2383824-2383934:-1:exon

position:2383824:-1
position: 2383824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2383934:-1
position: 2383934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2380488-2380651:-1:exon

position:2380488:-1
position: 2380488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2380651:-1
position: 2380651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2379707-2379836:-1:exon

position:2379707:-1
position: 2379707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2379836:-1
position: 2379836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2378164-2378296:-1:exon

position:2378164:-1
position: 2378164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2378296:-1
position: 2378296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2376176-2376257:-1:exon

position:2376176:-1
position: 2376176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2376257:-1
position: 2376257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2375036-2375201:-1:exon

position:2375036:-1
position: 2375036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2375201:-1
position: 2375201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2374787-2374929:-1:exon

position:2374787:-1
position: 2374787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2374929:-1
position: 2374929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2374290-2374382:-1:exon

position:2374290:-1
position: 2374290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2374382:-1
position: 2374382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2372400-2372595:-1:exon

position:2372400:-1
position: 2372400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2372595:-1
position: 2372595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2366774-2366852:-1:exon

position:2366774:-1
position: 2366774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2366852:-1
position: 2366852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2364358-2364472:-1:exon

position:2364358:-1
position: 2364358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2364472:-1
position: 2364472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2360551-2360684:-1:exon

position:2360551:-1
position: 2360551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2360684:-1
position: 2360684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2359644-2359767:-1:exon

position:2359644:-1
position: 2359644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2359767:-1
position: 2359767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2356577-2356701:-1:exon

position:2356577:-1
position: 2356577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2356701:-1
position: 2356701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2355463-2356227:-1:exon

position:2356227:-1
position: 2356227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pls1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pls1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plastin-1
translation: MENSTTTISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASVPLPGYKVREIVEKILAVADNNKDGKISFEEFVSLMQELKSRDISKTFRKIINKREGITAIGGTSSISSEGTQHSYSEEEKVAFVNWINKALENDPDCRHLLPMNPADNSLFKSLADGILLCKMINLSEPDTIDERAINKRKLTPFTVSENLNLALNSASAIGCTVVNIGAQDLKEGKPHLVLGLLWQIIKVGLFADIELSRNEALIALLSEGEELEELMRLSPEELLLRWVNYHLTNAGWRPISNFSQDIKDSRAYFHLLNQIAPKGDRDGPAIDIDLSGFNEKNDLKRAGLMLQEADKLGCRQFVSPADVVSGNPKLNLAFVANLFNTYPCLHKPDNNDIDINLLEGESKEERTFRNWMNSLGVNPYINHLYSDLADALVIFQLYEMIRVPVNWNQVNKPPYPALGGNMKKIENCNYAVALGKNEAKFSLVGIAGQDLNEGNSTLTLALVWQLMRRYTLKVLSDLGDGEKVNDDIIIKWVNQTLKNANKNTSISSFKDKSISTSLPVLDLIDAIAPNAVRQEMVKRENLSDEDKLNNAKYAVSVARKIGARIYALPDDLVEVKPKMVMTVFACLMGKGLNRIK
SIO_010081: Pls1
subclass of: SO_0000673
so part of: Pls1
location: complement(join(2356092..2356227,2356577..2356701,2359644..2359767,2360551..2360684,2364358..2364472,2366774..2366852,2372400..2372595,2374290..2374382,2374787..2374929,2375036..2375201,2376176..2376257,2378164..2378296,2379707..2379836,2380488..2380651,2383824..2383893))
location: region:2356092-2383893:-1
so has part: feature:2383824-2383893:-1:exon
so has part: feature:2380488-2380651:-1:exon
so has part: feature:2379707-2379836:-1:exon
so has part: feature:2378164-2378296:-1:exon
so has part: feature:2376176-2376257:-1:exon
so has part: feature:2375036-2375201:-1:exon
so has part: feature:2374787-2374929:-1:exon
so has part: feature:2374290-2374382:-1:exon
so has part: feature:2372400-2372595:-1:exon
so has part: feature:2366774-2366852:-1:exon
so has part: feature:2364358-2364472:-1:exon
so has part: feature:2360551-2360684:-1:exon
so has part: feature:2359644-2359767:-1:exon
so has part: feature:2356577-2356701:-1:exon
so has part: feature:2356092-2356227:-1:exon

XP_048190916.1
type: Protein
SIO_000068: ncbiprotein

position:2356092:-1
position: 2356092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2383893:-1
position: 2383893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2383824-2383893:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2380488-2380651:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2379707-2379836:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2378164-2378296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2376176-2376257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2375036-2375201:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2374787-2374929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2374290-2374382:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2372400-2372595:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2366774-2366852:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2364358-2364472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2360551-2360684:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2359644-2359767:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2356577-2356701:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2356092-2356227:-1:exon

Atr
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Atr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2400498..2451629
location: region:2400498-2451629:1
so has part: feature:2400498-2451629:1:exon
subclass of: SO_0000010

125342646
type: Gene
SIO_000068: ncbigene

position:2400498:1
position: 2400498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2451629:1
position: 2451629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2400498-2451629:1:exon

Atr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Atr
product: ATR serine/threonine kinase, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334939.1
SIO_010081: Atr
subclass of: SO_0000673
so part of: Atr
location: join(2400498..2400580,2403083..2403174,2403884..2404033,2404633..2405510,2406215..2406384,2407390..2407578,2407951..2408141,2409160..2409312,2411104..2411296,2411525..2411787,2412528..2412718,2413328..2413428,2413734..2413905,2414588..2414761,2416384..2416578,2419482..2419667,2420594..2420686,2421073..2421203,2422206..2422349,2424088..2424181,2425431..2425556,2426604..2426810,2428364..2428477,2429316..2429431,2430291..2430411,2431275..2431412,2432661..2432871,2433124..2433302,2434144..2434308,2435455..2435546,2436112..2436203,2436655..2436832,2437668..2437847,2438574..2438733,2439791..2439970,2440922..2441064,2441259..2441356,2442308..2442540,2444147..2444281,2445479..2445679,2445811..2445954,2446929..2447079,2447793..2447949,2448038..2448191,2449214..2449365,2449701..2449806,2451281..2451629)
location: region:2400498-2451629:1
so has part: feature:2400498-2400580:1:exon
so has part: feature:2403083-2403174:1:exon
so has part: feature:2403884-2404033:1:exon
so has part: feature:2404633-2405510:1:exon
so has part: feature:2406215-2406384:1:exon
so has part: feature:2407390-2407578:1:exon
so has part: feature:2407951-2408141:1:exon
so has part: feature:2409160-2409312:1:exon
so has part: feature:2411104-2411296:1:exon
so has part: feature:2411525-2411787:1:exon
so has part: feature:2412528-2412718:1:exon
so has part: feature:2413328-2413428:1:exon
so has part: feature:2413734-2413905:1:exon
so has part: feature:2414588-2414761:1:exon
so has part: feature:2416384-2416578:1:exon
so has part: feature:2419482-2419667:1:exon
so has part: feature:2420594-2420686:1:exon
so has part: feature:2421073-2421203:1:exon
so has part: feature:2422206-2422349:1:exon
so has part: feature:2424088-2424181:1:exon
so has part: feature:2425431-2425556:1:exon
so has part: feature:2426604-2426810:1:exon
so has part: feature:2428364-2428477:1:exon
so has part: feature:2429316-2429431:1:exon
so has part: feature:2430291-2430411:1:exon
so has part: feature:2431275-2431412:1:exon
so has part: feature:2432661-2432871:1:exon
so has part: feature:2433124-2433302:1:exon
so has part: feature:2434144-2434308:1:exon
so has part: feature:2435455-2435546:1:exon
so has part: feature:2436112-2436203:1:exon
so has part: feature:2436655-2436832:1:exon
so has part: feature:2437668-2437847:1:exon
so has part: feature:2438574-2438733:1:exon
so has part: feature:2439791-2439970:1:exon
so has part: feature:2440922-2441064:1:exon
so has part: feature:2441259-2441356:1:exon
so has part: feature:2442308-2442540:1:exon
so has part: feature:2444147-2444281:1:exon
so has part: feature:2445479-2445679:1:exon
so has part: feature:2445811-2445954:1:exon
so has part: feature:2446929-2447079:1:exon
so has part: feature:2447793-2447949:1:exon
so has part: feature:2448038-2448191:1:exon
so has part: feature:2449214-2449365:1:exon
so has part: feature:2449701-2449806:1:exon
so has part: feature:2451281-2451629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2400498-2400580:1:exon

position:2400580:1
position: 2400580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2403083-2403174:1:exon

position:2403083:1
position: 2403083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2403174:1
position: 2403174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2403884-2404033:1:exon

position:2403884:1
position: 2403884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2404033:1
position: 2404033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2404633-2405510:1:exon

position:2404633:1
position: 2404633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2405510:1
position: 2405510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2406215-2406384:1:exon

position:2406215:1
position: 2406215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2406384:1
position: 2406384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2407390-2407578:1:exon

position:2407390:1
position: 2407390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2407578:1
position: 2407578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2407951-2408141:1:exon

position:2407951:1
position: 2407951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2408141:1
position: 2408141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2409160-2409312:1:exon

position:2409160:1
position: 2409160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2409312:1
position: 2409312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2411104-2411296:1:exon

position:2411104:1
position: 2411104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2411296:1
position: 2411296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2411525-2411787:1:exon

position:2411525:1
position: 2411525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2411787:1
position: 2411787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2412528-2412718:1:exon

position:2412528:1
position: 2412528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2412718:1
position: 2412718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2413328-2413428:1:exon

position:2413328:1
position: 2413328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2413428:1
position: 2413428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2413734-2413905:1:exon

position:2413734:1
position: 2413734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2413905:1
position: 2413905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2414588-2414761:1:exon

position:2414588:1
position: 2414588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2414761:1
position: 2414761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2416384-2416578:1:exon

position:2416384:1
position: 2416384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2416578:1
position: 2416578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2419482-2419667:1:exon

position:2419482:1
position: 2419482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2419667:1
position: 2419667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2420594-2420686:1:exon

position:2420594:1
position: 2420594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2420686:1
position: 2420686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2421073-2421203:1:exon

position:2421073:1
position: 2421073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2421203:1
position: 2421203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2422206-2422349:1:exon

position:2422206:1
position: 2422206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2422349:1
position: 2422349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2424088-2424181:1:exon

position:2424088:1
position: 2424088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2424181:1
position: 2424181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2425431-2425556:1:exon

position:2425431:1
position: 2425431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2425556:1
position: 2425556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2426604-2426810:1:exon

position:2426604:1
position: 2426604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2426810:1
position: 2426810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2428364-2428477:1:exon

position:2428364:1
position: 2428364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2428477:1
position: 2428477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2429316-2429431:1:exon

position:2429316:1
position: 2429316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2429431:1
position: 2429431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2430291-2430411:1:exon

position:2430291:1
position: 2430291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2430411:1
position: 2430411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2431275-2431412:1:exon

position:2431275:1
position: 2431275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2431412:1
position: 2431412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2432661-2432871:1:exon

position:2432661:1
position: 2432661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2432871:1
position: 2432871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2433124-2433302:1:exon

position:2433124:1
position: 2433124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2433302:1
position: 2433302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2434144-2434308:1:exon

position:2434144:1
position: 2434144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2434308:1
position: 2434308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2435455-2435546:1:exon

position:2435455:1
position: 2435455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2435546:1
position: 2435546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2436112-2436203:1:exon

position:2436112:1
position: 2436112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2436203:1
position: 2436203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2436655-2436832:1:exon

position:2436655:1
position: 2436655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2436832:1
position: 2436832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2437668-2437847:1:exon

position:2437668:1
position: 2437668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2437847:1
position: 2437847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2438574-2438733:1:exon

position:2438574:1
position: 2438574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438733:1
position: 2438733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2439791-2439970:1:exon

position:2439791:1
position: 2439791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2439970:1
position: 2439970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2440922-2441064:1:exon

position:2440922:1
position: 2440922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2441064:1
position: 2441064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2441259-2441356:1:exon

position:2441259:1
position: 2441259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2441356:1
position: 2441356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2442308-2442540:1:exon

position:2442308:1
position: 2442308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2442540:1
position: 2442540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2444147-2444281:1:exon

position:2444147:1
position: 2444147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2444281:1
position: 2444281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:2445479-2445679:1:exon

position:2445479:1
position: 2445479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2445679:1
position: 2445679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:2445811-2445954:1:exon

position:2445811:1
position: 2445811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2445954:1
position: 2445954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:2446929-2447079:1:exon

position:2446929:1
position: 2446929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2447079:1
position: 2447079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:2447793-2447949:1:exon

position:2447793:1
position: 2447793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2447949:1
position: 2447949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:2448038-2448191:1:exon

position:2448038:1
position: 2448038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2448191:1
position: 2448191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:2449214-2449365:1:exon

position:2449214:1
position: 2449214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2449365:1
position: 2449365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:2449701-2449806:1:exon

position:2449701:1
position: 2449701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2449806:1
position: 2449806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:2451281-2451629:1:exon

position:2451281:1
position: 2451281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Atr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Atr
product: ATR serine/threonine kinase, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334942.1
SIO_010081: Atr
subclass of: SO_0000673
so part of: Atr
location: join(2400498..2400580,2403083..2403174,2403884..2404033,2404633..2405510,2406215..2406384,2407390..2407578,2407951..2408141,2409160..2409312,2411104..2411296,2411525..2411787,2412528..2412718,2413328..2413428,2413734..2413905,2414588..2414761,2416384..2416578,2419482..2419667,2420594..2420686,2421073..2421203,2422206..2422349,2424088..2424181,2425431..2425556,2426604..2426810,2428364..2428477,2429316..2429431,2430291..2430411,2431275..2431412,2432661..2432871,2433124..2433302,2434144..2434308,2435455..2435546,2436112..2436203,2436655..2436832,2437668..2437847,2438574..2438733,2439791..2439970,2442508..2442540,2444147..2444281,2445479..2445679,2445811..2445954,2446929..2447079,2447793..2447949,2448038..2448191,2449214..2449365,2449701..2449806,2451281..2451629)
location: region:2400498-2451629:1
so has part: feature:2400498-2400580:1:exon
so has part: feature:2403083-2403174:1:exon
so has part: feature:2403884-2404033:1:exon
so has part: feature:2404633-2405510:1:exon
so has part: feature:2406215-2406384:1:exon
so has part: feature:2407390-2407578:1:exon
so has part: feature:2407951-2408141:1:exon
so has part: feature:2409160-2409312:1:exon
so has part: feature:2411104-2411296:1:exon
so has part: feature:2411525-2411787:1:exon
so has part: feature:2412528-2412718:1:exon
so has part: feature:2413328-2413428:1:exon
so has part: feature:2413734-2413905:1:exon
so has part: feature:2414588-2414761:1:exon
so has part: feature:2416384-2416578:1:exon
so has part: feature:2419482-2419667:1:exon
so has part: feature:2420594-2420686:1:exon
so has part: feature:2421073-2421203:1:exon
so has part: feature:2422206-2422349:1:exon
so has part: feature:2424088-2424181:1:exon
so has part: feature:2425431-2425556:1:exon
so has part: feature:2426604-2426810:1:exon
so has part: feature:2428364-2428477:1:exon
so has part: feature:2429316-2429431:1:exon
so has part: feature:2430291-2430411:1:exon
so has part: feature:2431275-2431412:1:exon
so has part: feature:2432661-2432871:1:exon
so has part: feature:2433124-2433302:1:exon
so has part: feature:2434144-2434308:1:exon
so has part: feature:2435455-2435546:1:exon
so has part: feature:2436112-2436203:1:exon
so has part: feature:2436655-2436832:1:exon
so has part: feature:2437668-2437847:1:exon
so has part: feature:2438574-2438733:1:exon
so has part: feature:2439791-2439970:1:exon
so has part: feature:2442508-2442540:1:exon
so has part: feature:2444147-2444281:1:exon
so has part: feature:2445479-2445679:1:exon
so has part: feature:2445811-2445954:1:exon
so has part: feature:2446929-2447079:1:exon
so has part: feature:2447793-2447949:1:exon
so has part: feature:2448038-2448191:1:exon
so has part: feature:2449214-2449365:1:exon
so has part: feature:2449701-2449806:1:exon
so has part: feature:2451281-2451629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2400498-2400580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2403083-2403174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2403884-2404033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2404633-2405510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2406215-2406384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2407390-2407578:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2407951-2408141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2409160-2409312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2411104-2411296:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2411525-2411787:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2412528-2412718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2413328-2413428:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2413734-2413905:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2414588-2414761:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2416384-2416578:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2419482-2419667:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2420594-2420686:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2421073-2421203:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2422206-2422349:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2424088-2424181:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2425431-2425556:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2426604-2426810:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2428364-2428477:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2429316-2429431:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2430291-2430411:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2431275-2431412:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2432661-2432871:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433124-2433302:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2434144-2434308:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2435455-2435546:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2436112-2436203:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2436655-2436832:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2437668-2437847:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2438574-2438733:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2439791-2439970:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2442508-2442540:1:exon

position:2442508:1
position: 2442508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2444147-2444281:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2445479-2445679:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2445811-2445954:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2446929-2447079:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2447793-2447949:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2448038-2448191:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2449214-2449365:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2449701-2449806:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2451281-2451629:1:exon

Atr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Atr
product: ATR serine/threonine kinase, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334941.1
SIO_010081: Atr
subclass of: SO_0000673
so part of: Atr
location: join(2400498..2400580,2403083..2403174,2403884..2404033,2404633..2405510,2406215..2406384,2407390..2407578,2407951..2408141,2409160..2409312,2411104..2411296,2411525..2411787,2412528..2412718,2413328..2413428,2413734..2413905,2414588..2414761,2416384..2416578,2419482..2419667,2420594..2420686,2421073..2421203,2422206..2422349,2424088..2424181,2425431..2425556,2428364..2428477,2429316..2429431,2430291..2430411,2431275..2431412,2432661..2432871,2433124..2433302,2434144..2434308,2435455..2435546,2436112..2436203,2436655..2436832,2437668..2437847,2438574..2438733,2439791..2439970,2440922..2441064,2441259..2441356,2442308..2442540,2444147..2444281,2445479..2445679,2445811..2445954,2446929..2447079,2447793..2447949,2448038..2448191,2449214..2449365,2449701..2449806,2451281..2451629)
location: region:2400498-2451629:1
so has part: feature:2400498-2400580:1:exon
so has part: feature:2403083-2403174:1:exon
so has part: feature:2403884-2404033:1:exon
so has part: feature:2404633-2405510:1:exon
so has part: feature:2406215-2406384:1:exon
so has part: feature:2407390-2407578:1:exon
so has part: feature:2407951-2408141:1:exon
so has part: feature:2409160-2409312:1:exon
so has part: feature:2411104-2411296:1:exon
so has part: feature:2411525-2411787:1:exon
so has part: feature:2412528-2412718:1:exon
so has part: feature:2413328-2413428:1:exon
so has part: feature:2413734-2413905:1:exon
so has part: feature:2414588-2414761:1:exon
so has part: feature:2416384-2416578:1:exon
so has part: feature:2419482-2419667:1:exon
so has part: feature:2420594-2420686:1:exon
so has part: feature:2421073-2421203:1:exon
so has part: feature:2422206-2422349:1:exon
so has part: feature:2424088-2424181:1:exon
so has part: feature:2425431-2425556:1:exon
so has part: feature:2428364-2428477:1:exon
so has part: feature:2429316-2429431:1:exon
so has part: feature:2430291-2430411:1:exon
so has part: feature:2431275-2431412:1:exon
so has part: feature:2432661-2432871:1:exon
so has part: feature:2433124-2433302:1:exon
so has part: feature:2434144-2434308:1:exon
so has part: feature:2435455-2435546:1:exon
so has part: feature:2436112-2436203:1:exon
so has part: feature:2436655-2436832:1:exon
so has part: feature:2437668-2437847:1:exon
so has part: feature:2438574-2438733:1:exon
so has part: feature:2439791-2439970:1:exon
so has part: feature:2440922-2441064:1:exon
so has part: feature:2441259-2441356:1:exon
so has part: feature:2442308-2442540:1:exon
so has part: feature:2444147-2444281:1:exon
so has part: feature:2445479-2445679:1:exon
so has part: feature:2445811-2445954:1:exon
so has part: feature:2446929-2447079:1:exon
so has part: feature:2447793-2447949:1:exon
so has part: feature:2448038-2448191:1:exon
so has part: feature:2449214-2449365:1:exon
so has part: feature:2449701-2449806:1:exon
so has part: feature:2451281-2451629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2400498-2400580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2403083-2403174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2403884-2404033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2404633-2405510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2406215-2406384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2407390-2407578:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2407951-2408141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2409160-2409312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2411104-2411296:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2411525-2411787:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2412528-2412718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2413328-2413428:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2413734-2413905:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2414588-2414761:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2416384-2416578:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2419482-2419667:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2420594-2420686:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2421073-2421203:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2422206-2422349:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2424088-2424181:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2425431-2425556:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2428364-2428477:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2429316-2429431:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2430291-2430411:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2431275-2431412:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2432661-2432871:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2433124-2433302:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2434144-2434308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2435455-2435546:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2436112-2436203:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2436655-2436832:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2437668-2437847:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2438574-2438733:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2439791-2439970:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2440922-2441064:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2441259-2441356:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2442308-2442540:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2444147-2444281:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2445479-2445679:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2445811-2445954:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2446929-2447079:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2447793-2447949:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2448038-2448191:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2449214-2449365:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2449701-2449806:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2451281-2451629:1:exon

Atr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Atr
product: ATR serine/threonine kinase, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334940.1
SIO_010081: Atr
subclass of: SO_0000673
so part of: Atr
location: join(2400498..2400580,2403083..2403174,2403884..2404033,2404633..2405510,2406215..2406384,2407390..2407578,2407951..2408141,2409160..2409312,2411104..2411296,2411525..2411787,2412528..2412718,2413328..2413428,2413734..2413905,2414588..2414761,2416384..2416578,2419482..2419667,2420594..2420686,2421073..2421203,2424088..2424181,2425431..2425556,2426604..2426810,2428364..2428477,2429316..2429431,2430291..2430411,2431275..2431412,2432661..2432871,2433124..2433302,2434144..2434308,2435455..2435546,2436112..2436203,2436655..2436832,2437668..2437847,2438574..2438733,2439791..2439970,2440922..2441064,2441259..2441356,2442308..2442540,2444147..2444281,2445479..2445679,2445811..2445954,2446929..2447079,2447793..2447949,2448038..2448191,2449214..2449365,2449701..2449806,2451281..2451629)
location: region:2400498-2451629:1
so has part: feature:2400498-2400580:1:exon
so has part: feature:2403083-2403174:1:exon
so has part: feature:2403884-2404033:1:exon
so has part: feature:2404633-2405510:1:exon
so has part: feature:2406215-2406384:1:exon
so has part: feature:2407390-2407578:1:exon
so has part: feature:2407951-2408141:1:exon
so has part: feature:2409160-2409312:1:exon
so has part: feature:2411104-2411296:1:exon
so has part: feature:2411525-2411787:1:exon
so has part: feature:2412528-2412718:1:exon
so has part: feature:2413328-2413428:1:exon
so has part: feature:2413734-2413905:1:exon
so has part: feature:2414588-2414761:1:exon
so has part: feature:2416384-2416578:1:exon
so has part: feature:2419482-2419667:1:exon
so has part: feature:2420594-2420686:1:exon
so has part: feature:2421073-2421203:1:exon
so has part: feature:2424088-2424181:1:exon
so has part: feature:2425431-2425556:1:exon
so has part: feature:2426604-2426810:1:exon
so has part: feature:2428364-2428477:1:exon
so has part: feature:2429316-2429431:1:exon
so has part: feature:2430291-2430411:1:exon
so has part: feature:2431275-2431412:1:exon
so has part: feature:2432661-2432871:1:exon
so has part: feature:2433124-2433302:1:exon
so has part: feature:2434144-2434308:1:exon
so has part: feature:2435455-2435546:1:exon
so has part: feature:2436112-2436203:1:exon
so has part: feature:2436655-2436832:1:exon
so has part: feature:2437668-2437847:1:exon
so has part: feature:2438574-2438733:1:exon
so has part: feature:2439791-2439970:1:exon
so has part: feature:2440922-2441064:1:exon
so has part: feature:2441259-2441356:1:exon
so has part: feature:2442308-2442540:1:exon
so has part: feature:2444147-2444281:1:exon
so has part: feature:2445479-2445679:1:exon
so has part: feature:2445811-2445954:1:exon
so has part: feature:2446929-2447079:1:exon
so has part: feature:2447793-2447949:1:exon
so has part: feature:2448038-2448191:1:exon
so has part: feature:2449214-2449365:1:exon
so has part: feature:2449701-2449806:1:exon
so has part: feature:2451281-2451629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2400498-2400580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2403083-2403174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2403884-2404033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2404633-2405510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2406215-2406384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2407390-2407578:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2407951-2408141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2409160-2409312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2411104-2411296:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2411525-2411787:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2412528-2412718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2413328-2413428:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2413734-2413905:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2414588-2414761:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2416384-2416578:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2419482-2419667:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2420594-2420686:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2421073-2421203:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2424088-2424181:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2425431-2425556:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2426604-2426810:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2428364-2428477:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2429316-2429431:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2430291-2430411:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2431275-2431412:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2432661-2432871:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2433124-2433302:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2434144-2434308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2435455-2435546:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2436112-2436203:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2436655-2436832:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2437668-2437847:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2438574-2438733:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2439791-2439970:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2440922-2441064:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2441259-2441356:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2442308-2442540:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2444147-2444281:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2445479-2445679:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2445811-2445954:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2446929-2447079:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2447793-2447949:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2448038-2448191:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2449214-2449365:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2449701-2449806:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2451281-2451629:1:exon

Atr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Atr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase ATR isoform X1
translation: MGEHGLELASMIPALRELGSATPEEYNTVVQKPRQILCQFIDRILTDVNVVALELIKKTDSQPTSVMLLDFIQHIMKSSPLMFVNVNGGQEQGEAKGSCVEFSNWIITRLLRITAAPSCHVLHKKISEVICSLLFLFKSKNPAIFGVLTKELLFVFEDFIHLHQRNAAGDIREWPVAICRFFSQLDERMGYLQAAPLQLMSMQNLEFIEVTLLTVLIRIIAIVFFRRQELFLWRIGCVLLEYGSPKVKSLAMTLLTELFELGGLPIQPASMFFKSLLELLKDLAEMDTDQLKLYEEPLSKLIKTLFPFEAEAYGNIEPVYLNMLLEKLCVMFESGVLMRLKSDLLKAALCHLLQYFLTFVPAGYESALQVRKAYVKNICRALVDVLGAQVDEEYLLGPLYAALKMESEEAIQCQTKQEDGSSGRDELSPKRRRRSPSTSSQRDSKQSEEDMKRMDMSEKSLLWNALKHKAESLQASLECNLNNHSPETLEGIATVLQLAALCTVHCSSEYTECHDLKDYQDRSRKNSSVAMTWMPLEFYSKVLKSCRSLLESVQKSELEVVIDKVVKVYDALIYVQVRSSFEDAILEDLCGMLSLPWLASLSADDPSKLPAFASPLLRLSQRVSGSYSLQAQARCVFLLTLFPRRLFLEWRAAVYSRALHSTHEEIRASCVKGFFILLQQQSPCGSVPQLLLDQVKGDCDMVQKEFASVLGQLVCALHGMFELSNSLVEPDVGQGPRGLFCESIKAVSQVKCSSFQLKASVCKPFLFLLEKQTPSPVKLAFIDNLHHLCKHLEFPDDEADVKAVLGALLNLMEDPDKGVRVAFSGSVKHILESLSSEDGFIKELFVLRMKEAYTQAQISRNNELKDTLILTTGDIGRAAKGDLVPFALLHLLHCLLSKSASVSGAAYTEIRALVAAKSVKLQNFFSQYKKPICQFLVETLHSSQMAALSGSTPHQTAEMRMQEEAHQREMALNTLSEIANVFDFPDLNRFLSRTLQVLLPDLAAKASPAASALIRTLGKQLNVNRREILINNFKYIFSHLVCSCSKDELERALHYLKNETEIELGSLLRQDFQGLHNELLLRLGEHYQQVFNGLSILASFASSDDPNQGPRDAMSPELMADYLQPKLLGILAFFNMQLLSSNVGIEDKKMALNSLMSLMKLMGPKHVSSVRVKMMTTLRTGLRFKDNFPELCCRAWDCFVRCLDHAYLGSLLSHVIVALLPLIHIQPKETAAIFHYLIIDNREAVQDFLHEIYFLPDHPELQKIKAVLQEYRKETSESTNLQTSLQLFMKAVQHENVDVRIHALTSLKETLYKNQEKLIKYATNSETVEPVISQLVTVLLKGCQDANSQARLLCGECLGELGAIDPGRLDFSTTETQGKDFTFVTGVEDLNFAYGLLTELTRAYLAYADNSRVQDSAAYAIQELLAIYDCREMQNHRQGCQLWKMFPEHVREILEPHLNTRYKSSQKSTDWSEVKKPIYLSKLGNNFADWSASWAGYLITKVRHELASKIFTCCSIMMKHDFKVTIYLLPHILVYVLLGCDEQDQQEVYAEMLAVLKHDDQHSVNARDHASDLCQLSIQTVFSMLDHLTQWARHKFQEMNSEDAPQGKSSREKANPGVSSAQADGYESVTRFLDLIPQDTLAVASFRSKAYTRAVMHFESFITEKKQNIREHLGFLQKLYAAMHEADGVAGVSAIRKAEPSLKEQILEHESTGLLRDATACYDRAIQLEPDQIMHYHGVVKSMLGLGQLSSVITQVNGVHASRSEWIEELNTYRVEAAWKLSQWDLVENYLAADRKSTTWSVRLGQLLLSAKKKDVTAFYDTLKLVRAEQIVPLSAASFERGSYQRGYEYIVRLHMLCELEHGIRPLFHQFPGDTCHEDSLNWVARLEMTQNSYRAKEPILALRRALLSLNKRPDYSEMIGECWLQSARVARKAGHHQTAYNALLNAGESRLAELYMEKAKWLWSKGDVHQALIVLQKGVDLCFPEDKSQTEIKDMLILG…
SIO_010081: Atr
subclass of: SO_0000673
so part of: Atr
location: join(2400522..2400580,2403083..2403174,2403884..2404033,2404633..2405510,2406215..2406384,2407390..2407578,2407951..2408141,2409160..2409312,2411104..2411296,2411525..2411787,2412528..2412718,2413328..2413428,2413734..2413905,2414588..2414761,2416384..2416578,2419482..2419667,2420594..2420686,2421073..2421203,2422206..2422349,2424088..2424181,2425431..2425556,2426604..2426810,2428364..2428477,2429316..2429431,2430291..2430411,2431275..2431412,2432661..2432871,2433124..2433302,2434144..2434308,2435455..2435546,2436112..2436203,2436655..2436832,2437668..2437847,2438574..2438733,2439791..2439970,2440922..2441064,2441259..2441356,2442308..2442540,2444147..2444281,2445479..2445679,2445811..2445954,2446929..2447079,2447793..2447949,2448038..2448191,2449214..2449365,2449701..2449806,2451281..2451454)
location: region:2400522-2451454:1
so has part: feature:2400522-2400580:1:exon
so has part: feature:2403083-2403174:1:exon
so has part: feature:2403884-2404033:1:exon
so has part: feature:2404633-2405510:1:exon
so has part: feature:2406215-2406384:1:exon
so has part: feature:2407390-2407578:1:exon
so has part: feature:2407951-2408141:1:exon
so has part: feature:2409160-2409312:1:exon
so has part: feature:2411104-2411296:1:exon
so has part: feature:2411525-2411787:1:exon
so has part: feature:2412528-2412718:1:exon
so has part: feature:2413328-2413428:1:exon
so has part: feature:2413734-2413905:1:exon
so has part: feature:2414588-2414761:1:exon
so has part: feature:2416384-2416578:1:exon
so has part: feature:2419482-2419667:1:exon
so has part: feature:2420594-2420686:1:exon
so has part: feature:2421073-2421203:1:exon
so has part: feature:2422206-2422349:1:exon
so has part: feature:2424088-2424181:1:exon
so has part: feature:2425431-2425556:1:exon
so has part: feature:2426604-2426810:1:exon
so has part: feature:2428364-2428477:1:exon
so has part: feature:2429316-2429431:1:exon
so has part: feature:2430291-2430411:1:exon
so has part: feature:2431275-2431412:1:exon
so has part: feature:2432661-2432871:1:exon
so has part: feature:2433124-2433302:1:exon
so has part: feature:2434144-2434308:1:exon
so has part: feature:2435455-2435546:1:exon
so has part: feature:2436112-2436203:1:exon
so has part: feature:2436655-2436832:1:exon
so has part: feature:2437668-2437847:1:exon
so has part: feature:2438574-2438733:1:exon
so has part: feature:2439791-2439970:1:exon
so has part: feature:2440922-2441064:1:exon
so has part: feature:2441259-2441356:1:exon
so has part: feature:2442308-2442540:1:exon
so has part: feature:2444147-2444281:1:exon
so has part: feature:2445479-2445679:1:exon
so has part: feature:2445811-2445954:1:exon
so has part: feature:2446929-2447079:1:exon
so has part: feature:2447793-2447949:1:exon
so has part: feature:2448038-2448191:1:exon
so has part: feature:2449214-2449365:1:exon
so has part: feature:2449701-2449806:1:exon
so has part: feature:2451281-2451454:1:exon

XP_048190896.1
type: Protein
SIO_000068: ncbiprotein

position:2400522:1
position: 2400522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2451454:1
position: 2451454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2400522-2400580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2403083-2403174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2403884-2404033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2404633-2405510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2406215-2406384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2407390-2407578:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2407951-2408141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2409160-2409312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2411104-2411296:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2411525-2411787:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2412528-2412718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2413328-2413428:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2413734-2413905:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2414588-2414761:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2416384-2416578:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2419482-2419667:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2420594-2420686:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2421073-2421203:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2422206-2422349:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2424088-2424181:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2425431-2425556:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2426604-2426810:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2428364-2428477:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2429316-2429431:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2430291-2430411:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2431275-2431412:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2432661-2432871:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433124-2433302:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2434144-2434308:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2435455-2435546:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2436112-2436203:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2436655-2436832:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2437668-2437847:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2438574-2438733:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2439791-2439970:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2440922-2441064:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2441259-2441356:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2442308-2442540:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2444147-2444281:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2445479-2445679:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2445811-2445954:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2446929-2447079:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2447793-2447949:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2448038-2448191:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2449214-2449365:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2449701-2449806:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2451281-2451454:1:exon

Atr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Atr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase ATR isoform X4
translation: MGEHGLELASMIPALRELGSATPEEYNTVVQKPRQILCQFIDRILTDVNVVALELIKKTDSQPTSVMLLDFIQHIMKSSPLMFVNVNGGQEQGEAKGSCVEFSNWIITRLLRITAAPSCHVLHKKISEVICSLLFLFKSKNPAIFGVLTKELLFVFEDFIHLHQRNAAGDIREWPVAICRFFSQLDERMGYLQAAPLQLMSMQNLEFIEVTLLTVLIRIIAIVFFRRQELFLWRIGCVLLEYGSPKVKSLAMTLLTELFELGGLPIQPASMFFKSLLELLKDLAEMDTDQLKLYEEPLSKLIKTLFPFEAEAYGNIEPVYLNMLLEKLCVMFESGVLMRLKSDLLKAALCHLLQYFLTFVPAGYESALQVRKAYVKNICRALVDVLGAQVDEEYLLGPLYAALKMESEEAIQCQTKQEDGSSGRDELSPKRRRRSPSTSSQRDSKQSEEDMKRMDMSEKSLLWNALKHKAESLQASLECNLNNHSPETLEGIATVLQLAALCTVHCSSEYTECHDLKDYQDRSRKNSSVAMTWMPLEFYSKVLKSCRSLLESVQKSELEVVIDKVVKVYDALIYVQVRSSFEDAILEDLCGMLSLPWLASLSADDPSKLPAFASPLLRLSQRVSGSYSLQAQARCVFLLTLFPRRLFLEWRAAVYSRALHSTHEEIRASCVKGFFILLQQQSPCGSVPQLLLDQVKGDCDMVQKEFASVLGQLVCALHGMFELSNSLVEPDVGQGPRGLFCESIKAVSQVKCSSFQLKASVCKPFLFLLEKQTPSPVKLAFIDNLHHLCKHLEFPDDEADVKAVLGALLNLMEDPDKGVRVAFSGSVKHILESLSSEDGFIKELFVLRMKEAYTQAQISRNNELKDTLILTTGDIGRAAKGDLVPFALLHLLHCLLSKSASVSGAAYTEIRALVAAKSVKLQNFFSQYKKPICQFLVETLHSSQMAALSGSTPHQTAEMRMQEEAHQREMALNTLSEIANVFDFPDLNRFLSRTLQVLLPDLAAKASPAASALIRTLGKQLNVNRREILINNFKYIFSHLVCSCSKDELERALHYLKNETEIELGSLLRQDFQGLHNELLLRLGEHYQQVFNGLSILASFASSDDPNQGPRDAMSPELMADYLQPKLLGILAFFNMQLLSSNVGIEDKKMALNSLMSLMKLMGPKHVSSVRVKMMTTLRTGLRFKDNFPELCCRAWDCFVRCLDHAYLGSLLSHVIVALLPLIHIQPKETAAIFHYLIIDNREAVQDFLHEIYFLPDHPELQKIKAVLQEYRKETSESTNLQTSLQLFMKAVQHENVDVRIHALTSLKETLYKNQEKLIKYATNSETVEPVISQLVTVLLKGCQDANSQARLLCGECLGELGAIDPGRLDFSTTETQGKDFTFVTGVEDLNFAYGLLTELTRAYLAYADNSRVQDSAAYAIQELLAIYDCREMQNHRQGCQLWKMFPEHVREILEPHLNTRYKSSQKSTDWSEVKKPIYLSKLGNNFADWSASWAGYLITKVRHELASKIFTCCSIMMKHDFKVTIYLLPHILVYVLLGCDEQDQQEVYAEMLAVLKHDDQHSVNARDHASDLCQLSIQTVFSMLDHLTQWARHKFQEMNSEDAPQGKSSREKANPGVSSAQADGYESVTRFLDLIPQDTLAVASFRSKAYTRAVMHFESFITEKKQNIREHLGFLQKLYAAMHEADGVAGVSAIRKAEPSLKEQILEHESTGLLRDATACYDRAIQLEPDQIMHYHGVVKSMLGLGQLSSVITQVNGVHASRSEWIEELNTYRVEAAWKLSQWDLVENYLAADRKSTTWSVRLGQLLLSAKKKDVTAFYDTLKLVRAEQIVPLSAASFERGSYQRGYEYIVRLHMLCELEHGIRPLFHQFPGDTCHEDSLNWVARLEMTQNSYRAKEPILALRRALLSLNKRPDYSEMIGECWLQSARVARKAGHHQTAYNALLNAGESRLAELYMEKAKWLWSKGDVHQALIVLQKGVDLCFPEDKSQTEIKDMLILG…
SIO_010081: Atr
subclass of: SO_0000673
so part of: Atr
location: join(2400522..2400580,2403083..2403174,2403884..2404033,2404633..2405510,2406215..2406384,2407390..2407578,2407951..2408141,2409160..2409312,2411104..2411296,2411525..2411787,2412528..2412718,2413328..2413428,2413734..2413905,2414588..2414761,2416384..2416578,2419482..2419667,2420594..2420686,2421073..2421203,2422206..2422349,2424088..2424181,2425431..2425556,2426604..2426810,2428364..2428477,2429316..2429431,2430291..2430411,2431275..2431412,2432661..2432871,2433124..2433302,2434144..2434308,2435455..2435546,2436112..2436203,2436655..2436832,2437668..2437847,2438574..2438733,2439791..2439970,2442508..2442540,2444147..2444281,2445479..2445679,2445811..2445954,2446929..2447079,2447793..2447949,2448038..2448191,2449214..2449365,2449701..2449806,2451281..2451454)
location: region:2400522-2451454:1
so has part: feature:2400522-2400580:1:exon
so has part: feature:2403083-2403174:1:exon
so has part: feature:2403884-2404033:1:exon
so has part: feature:2404633-2405510:1:exon
so has part: feature:2406215-2406384:1:exon
so has part: feature:2407390-2407578:1:exon
so has part: feature:2407951-2408141:1:exon
so has part: feature:2409160-2409312:1:exon
so has part: feature:2411104-2411296:1:exon
so has part: feature:2411525-2411787:1:exon
so has part: feature:2412528-2412718:1:exon
so has part: feature:2413328-2413428:1:exon
so has part: feature:2413734-2413905:1:exon
so has part: feature:2414588-2414761:1:exon
so has part: feature:2416384-2416578:1:exon
so has part: feature:2419482-2419667:1:exon
so has part: feature:2420594-2420686:1:exon
so has part: feature:2421073-2421203:1:exon
so has part: feature:2422206-2422349:1:exon
so has part: feature:2424088-2424181:1:exon
so has part: feature:2425431-2425556:1:exon
so has part: feature:2426604-2426810:1:exon
so has part: feature:2428364-2428477:1:exon
so has part: feature:2429316-2429431:1:exon
so has part: feature:2430291-2430411:1:exon
so has part: feature:2431275-2431412:1:exon
so has part: feature:2432661-2432871:1:exon
so has part: feature:2433124-2433302:1:exon
so has part: feature:2434144-2434308:1:exon
so has part: feature:2435455-2435546:1:exon
so has part: feature:2436112-2436203:1:exon
so has part: feature:2436655-2436832:1:exon
so has part: feature:2437668-2437847:1:exon
so has part: feature:2438574-2438733:1:exon
so has part: feature:2439791-2439970:1:exon
so has part: feature:2442508-2442540:1:exon
so has part: feature:2444147-2444281:1:exon
so has part: feature:2445479-2445679:1:exon
so has part: feature:2445811-2445954:1:exon
so has part: feature:2446929-2447079:1:exon
so has part: feature:2447793-2447949:1:exon
so has part: feature:2448038-2448191:1:exon
so has part: feature:2449214-2449365:1:exon
so has part: feature:2449701-2449806:1:exon
so has part: feature:2451281-2451454:1:exon

XP_048190899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2400522-2400580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2403083-2403174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2403884-2404033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2404633-2405510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2406215-2406384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2407390-2407578:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2407951-2408141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2409160-2409312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2411104-2411296:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2411525-2411787:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2412528-2412718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2413328-2413428:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2413734-2413905:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2414588-2414761:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2416384-2416578:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2419482-2419667:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2420594-2420686:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2421073-2421203:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2422206-2422349:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2424088-2424181:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2425431-2425556:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2426604-2426810:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2428364-2428477:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2429316-2429431:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2430291-2430411:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2431275-2431412:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2432661-2432871:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433124-2433302:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2434144-2434308:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2435455-2435546:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2436112-2436203:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2436655-2436832:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2437668-2437847:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2438574-2438733:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2439791-2439970:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2442508-2442540:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2444147-2444281:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2445479-2445679:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2445811-2445954:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2446929-2447079:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2447793-2447949:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2448038-2448191:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2449214-2449365:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2449701-2449806:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2451281-2451454:1:exon

Atr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Atr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase ATR isoform X3
translation: MGEHGLELASMIPALRELGSATPEEYNTVVQKPRQILCQFIDRILTDVNVVALELIKKTDSQPTSVMLLDFIQHIMKSSPLMFVNVNGGQEQGEAKGSCVEFSNWIITRLLRITAAPSCHVLHKKISEVICSLLFLFKSKNPAIFGVLTKELLFVFEDFIHLHQRNAAGDIREWPVAICRFFSQLDERMGYLQAAPLQLMSMQNLEFIEVTLLTVLIRIIAIVFFRRQELFLWRIGCVLLEYGSPKVKSLAMTLLTELFELGGLPIQPASMFFKSLLELLKDLAEMDTDQLKLYEEPLSKLIKTLFPFEAEAYGNIEPVYLNMLLEKLCVMFESGVLMRLKSDLLKAALCHLLQYFLTFVPAGYESALQVRKAYVKNICRALVDVLGAQVDEEYLLGPLYAALKMESEEAIQCQTKQEDGSSGRDELSPKRRRRSPSTSSQRDSKQSEEDMKRMDMSEKSLLWNALKHKAESLQASLECNLNNHSPETLEGIATVLQLAALCTVHCSSEYTECHDLKDYQDRSRKNSSVAMTWMPLEFYSKVLKSCRSLLESVQKSELEVVIDKVVKVYDALIYVQVRSSFEDAILEDLCGMLSLPWLASLSADDPSKLPAFASPLLRLSQRVSGSYSLQAQARCVFLLTLFPRRLFLEWRAAVYSRALHSTHEEIRASCVKGFFILLQQQSPCGSVPQLLLDQVKGDCDMVQKEFASVLGQLVCALHGMFELSNSLVEPDVGQGPRGLFCESIKAVSQVKCSSFQLKASVCKPFLFLLEKQTPSPVKLAFIDNLHHLCKHLEFPDDEADVKAVLGALLNLMEDPDKGVRVAFSGSVKHILESLSSEDGFIKELFVLRMKEAYTQAQISRNNELKDTLILTTGDIGRAAKGDLVPFALLHLLHCLLSKSASVSGAAYTEIRALVAAKSVKLQNFFSQYKKPICQFLVETLHSSQMAALSGSTPHQTAEMRMQEEAHQREMALNTLSEIANVFDFPDLNRFLSRTLQVLLPDLAAKASPAASALIRTLGKQLNVNRREILINNFKYIFSHLVCSCSKDELERALHYLKNETEIELGSLLRQDFQGLHNELLLRLGEHYQQVFNGLSILASFASSDDPNQGPRDAMSPELMADYLQPKLLGILAFFNMQLLSSNVGIEDKKMALNSLMSLMKLMGPKHVSSVRVKMMTTLRTGLRFKDNFPELCCRAWDCFVRCLDHAYLGSLLSHVIVALLPLIHIQPKETAAIFHYLIIDNREAVQDFLHEIYFLPDHPELQKIKAVLQEYRKETSESTNLQTSLQLFMKAVQHENVDVRIHALTSLKETLYKNQTGVEDLNFAYGLLTELTRAYLAYADNSRVQDSAAYAIQELLAIYDCREMQNHRQGCQLWKMFPEHVREILEPHLNTRYKSSQKSTDWSEVKKPIYLSKLGNNFADWSASWAGYLITKVRHELASKIFTCCSIMMKHDFKVTIYLLPHILVYVLLGCDEQDQQEVYAEMLAVLKHDDQHSVNARDHASDLCQLSIQTVFSMLDHLTQWARHKFQEMNSEDAPQGKSSREKANPGVSSAQADGYESVTRFLDLIPQDTLAVASFRSKAYTRAVMHFESFITEKKQNIREHLGFLQKLYAAMHEADGVAGVSAIRKAEPSLKEQILEHESTGLLRDATACYDRAIQLEPDQIMHYHGVVKSMLGLGQLSSVITQVNGVHASRSEWIEELNTYRVEAAWKLSQWDLVENYLAADRKSTTWSVRLGQLLLSAKKKDVTAFYDTLKLVRAEQIVPLSAASFERGSYQRGYEYIVRLHMLCELEHGIRPLFHQFPGDTCHEDSLNWVARLEMTQNSYRAKEPILALRRALLSLNKRPDYSEMIGECWLQSARVARKAGHHQTAYNALLNAGESRLAELYMEKAKWLWSKGDVHQALIVLQKGVDLCFPEDKSQTEIKDMLILGRATLLVGRFMEETANFESNAVMKKYKDVTLFLPEWEAGHFYLAKYYDKLMPMVTDNKMEKQGDLIRYIV…
SIO_010081: Atr
subclass of: SO_0000673
so part of: Atr
location: join(2400522..2400580,2403083..2403174,2403884..2404033,2404633..2405510,2406215..2406384,2407390..2407578,2407951..2408141,2409160..2409312,2411104..2411296,2411525..2411787,2412528..2412718,2413328..2413428,2413734..2413905,2414588..2414761,2416384..2416578,2419482..2419667,2420594..2420686,2421073..2421203,2422206..2422349,2424088..2424181,2425431..2425556,2428364..2428477,2429316..2429431,2430291..2430411,2431275..2431412,2432661..2432871,2433124..2433302,2434144..2434308,2435455..2435546,2436112..2436203,2436655..2436832,2437668..2437847,2438574..2438733,2439791..2439970,2440922..2441064,2441259..2441356,2442308..2442540,2444147..2444281,2445479..2445679,2445811..2445954,2446929..2447079,2447793..2447949,2448038..2448191,2449214..2449365,2449701..2449806,2451281..2451454)
location: region:2400522-2451454:1
so has part: feature:2400522-2400580:1:exon
so has part: feature:2403083-2403174:1:exon
so has part: feature:2403884-2404033:1:exon
so has part: feature:2404633-2405510:1:exon
so has part: feature:2406215-2406384:1:exon
so has part: feature:2407390-2407578:1:exon
so has part: feature:2407951-2408141:1:exon
so has part: feature:2409160-2409312:1:exon
so has part: feature:2411104-2411296:1:exon
so has part: feature:2411525-2411787:1:exon
so has part: feature:2412528-2412718:1:exon
so has part: feature:2413328-2413428:1:exon
so has part: feature:2413734-2413905:1:exon
so has part: feature:2414588-2414761:1:exon
so has part: feature:2416384-2416578:1:exon
so has part: feature:2419482-2419667:1:exon
so has part: feature:2420594-2420686:1:exon
so has part: feature:2421073-2421203:1:exon
so has part: feature:2422206-2422349:1:exon
so has part: feature:2424088-2424181:1:exon
so has part: feature:2425431-2425556:1:exon
so has part: feature:2428364-2428477:1:exon
so has part: feature:2429316-2429431:1:exon
so has part: feature:2430291-2430411:1:exon
so has part: feature:2431275-2431412:1:exon
so has part: feature:2432661-2432871:1:exon
so has part: feature:2433124-2433302:1:exon
so has part: feature:2434144-2434308:1:exon
so has part: feature:2435455-2435546:1:exon
so has part: feature:2436112-2436203:1:exon
so has part: feature:2436655-2436832:1:exon
so has part: feature:2437668-2437847:1:exon
so has part: feature:2438574-2438733:1:exon
so has part: feature:2439791-2439970:1:exon
so has part: feature:2440922-2441064:1:exon
so has part: feature:2441259-2441356:1:exon
so has part: feature:2442308-2442540:1:exon
so has part: feature:2444147-2444281:1:exon
so has part: feature:2445479-2445679:1:exon
so has part: feature:2445811-2445954:1:exon
so has part: feature:2446929-2447079:1:exon
so has part: feature:2447793-2447949:1:exon
so has part: feature:2448038-2448191:1:exon
so has part: feature:2449214-2449365:1:exon
so has part: feature:2449701-2449806:1:exon
so has part: feature:2451281-2451454:1:exon

XP_048190898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2400522-2400580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2403083-2403174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2403884-2404033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2404633-2405510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2406215-2406384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2407390-2407578:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2407951-2408141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2409160-2409312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2411104-2411296:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2411525-2411787:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2412528-2412718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2413328-2413428:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2413734-2413905:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2414588-2414761:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2416384-2416578:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2419482-2419667:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2420594-2420686:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2421073-2421203:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2422206-2422349:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2424088-2424181:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2425431-2425556:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2428364-2428477:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2429316-2429431:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2430291-2430411:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2431275-2431412:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2432661-2432871:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2433124-2433302:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2434144-2434308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2435455-2435546:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2436112-2436203:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2436655-2436832:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2437668-2437847:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2438574-2438733:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2439791-2439970:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2440922-2441064:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2441259-2441356:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2442308-2442540:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2444147-2444281:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2445479-2445679:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2445811-2445954:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2446929-2447079:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2447793-2447949:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2448038-2448191:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2449214-2449365:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2449701-2449806:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2451281-2451454:1:exon

Atr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Atr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase ATR isoform X2
translation: MGEHGLELASMIPALRELGSATPEEYNTVVQKPRQILCQFIDRILTDVNVVALELIKKTDSQPTSVMLLDFIQHIMKSSPLMFVNVNGGQEQGEAKGSCVEFSNWIITRLLRITAAPSCHVLHKKISEVICSLLFLFKSKNPAIFGVLTKELLFVFEDFIHLHQRNAAGDIREWPVAICRFFSQLDERMGYLQAAPLQLMSMQNLEFIEVTLLTVLIRIIAIVFFRRQELFLWRIGCVLLEYGSPKVKSLAMTLLTELFELGGLPIQPASMFFKSLLELLKDLAEMDTDQLKLYEEPLSKLIKTLFPFEAEAYGNIEPVYLNMLLEKLCVMFESGVLMRLKSDLLKAALCHLLQYFLTFVPAGYESALQVRKAYVKNICRALVDVLGAQVDEEYLLGPLYAALKMESEEAIQCQTKQEDGSSGRDELSPKRRRRSPSTSSQRDSKQSEEDMKRMDMSEKSLLWNALKHKAESLQASLECNLNNHSPETLEGIATVLQLAALCTVHCSSEYTECHDLKDYQDRSRKNSSVAMTWMPLEFYSKVLKSCRSLLESVQKSELEVVIDKVVKVYDALIYVQVRSSFEDAILEDLCGMLSLPWLASLSADDPSKLPAFASPLLRLSQRVSGSYSLQAQARCVFLLTLFPRRLFLEWRAAVYSRALHSTHEEIRASCVKGFFILLQQQSPCGSVPQLLLDQVKGDCDMVQKEFASVLGQLVCALHGMFELSNSLVEPDVGQGPRGLFCESIKAVSQVKCSSFQLKASVCKPFLFLLEKQTPSPVKLAFIDNLHHLCKHLEFPDDEADVKAVLGALLNLMEDPDKGVRVAFSGSVKHILESLSSEDGFIKELFVLRMKEAYTQAQISRNNELKDTLILTTGDIGRAAKGDLVPFALLHLLHCLLSKSASVSGAAYTEIRALVAAKSVKLQNFFSQYKKPICQFLVETLHSSQMAALSGSTPHQTAEMRMQEEAHQREMALNTLSEIANVFDFPDLNRFLSRTLQVLLPDLAAKASPAASALIRTLGKQLNVNRREILINNFKYIFSHLVCSCSKDELERALHYLKNETEIELGSLLRQDFQGLHNELLLRLGEHYQQVFNGLSILASFASSDDPNQGPRDAMSPELMADYLQPKLLGILAFFNMQLLSSNVGIEDKKMALNSLMSLMKLMGPKHVSSVRVKMMTTLRTGLRFKDNFPELCCREAVQDFLHEIYFLPDHPELQKIKAVLQEYRKETSESTNLQTSLQLFMKAVQHENVDVRIHALTSLKETLYKNQEKLIKYATNSETVEPVISQLVTVLLKGCQDANSQARLLCGECLGELGAIDPGRLDFSTTETQGKDFTFVTGVEDLNFAYGLLTELTRAYLAYADNSRVQDSAAYAIQELLAIYDCREMQNHRQGCQLWKMFPEHVREILEPHLNTRYKSSQKSTDWSEVKKPIYLSKLGNNFADWSASWAGYLITKVRHELASKIFTCCSIMMKHDFKVTIYLLPHILVYVLLGCDEQDQQEVYAEMLAVLKHDDQHSVNARDHASDLCQLSIQTVFSMLDHLTQWARHKFQEMNSEDAPQGKSSREKANPGVSSAQADGYESVTRFLDLIPQDTLAVASFRSKAYTRAVMHFESFITEKKQNIREHLGFLQKLYAAMHEADGVAGVSAIRKAEPSLKEQILEHESTGLLRDATACYDRAIQLEPDQIMHYHGVVKSMLGLGQLSSVITQVNGVHASRSEWIEELNTYRVEAAWKLSQWDLVENYLAADRKSTTWSVRLGQLLLSAKKKDVTAFYDTLKLVRAEQIVPLSAASFERGSYQRGYEYIVRLHMLCELEHGIRPLFHQFPGDTCHEDSLNWVARLEMTQNSYRAKEPILALRRALLSLNKRPDYSEMIGECWLQSARVARKAGHHQTAYNALLNAGESRLAELYMEKAKWLWSKGDVHQALIVLQKGVDLCFPEDKSQTEIKDMLILGRATLLVGRFMEETANFESNAVMKKYKDVTLFLPEWEAGHFYLAKYYDK…
SIO_010081: Atr
subclass of: SO_0000673
so part of: Atr
location: join(2400522..2400580,2403083..2403174,2403884..2404033,2404633..2405510,2406215..2406384,2407390..2407578,2407951..2408141,2409160..2409312,2411104..2411296,2411525..2411787,2412528..2412718,2413328..2413428,2413734..2413905,2414588..2414761,2416384..2416578,2419482..2419667,2420594..2420686,2421073..2421203,2424088..2424181,2425431..2425556,2426604..2426810,2428364..2428477,2429316..2429431,2430291..2430411,2431275..2431412,2432661..2432871,2433124..2433302,2434144..2434308,2435455..2435546,2436112..2436203,2436655..2436832,2437668..2437847,2438574..2438733,2439791..2439970,2440922..2441064,2441259..2441356,2442308..2442540,2444147..2444281,2445479..2445679,2445811..2445954,2446929..2447079,2447793..2447949,2448038..2448191,2449214..2449365,2449701..2449806,2451281..2451454)
location: region:2400522-2451454:1
so has part: feature:2400522-2400580:1:exon
so has part: feature:2403083-2403174:1:exon
so has part: feature:2403884-2404033:1:exon
so has part: feature:2404633-2405510:1:exon
so has part: feature:2406215-2406384:1:exon
so has part: feature:2407390-2407578:1:exon
so has part: feature:2407951-2408141:1:exon
so has part: feature:2409160-2409312:1:exon
so has part: feature:2411104-2411296:1:exon
so has part: feature:2411525-2411787:1:exon
so has part: feature:2412528-2412718:1:exon
so has part: feature:2413328-2413428:1:exon
so has part: feature:2413734-2413905:1:exon
so has part: feature:2414588-2414761:1:exon
so has part: feature:2416384-2416578:1:exon
so has part: feature:2419482-2419667:1:exon
so has part: feature:2420594-2420686:1:exon
so has part: feature:2421073-2421203:1:exon
so has part: feature:2424088-2424181:1:exon
so has part: feature:2425431-2425556:1:exon
so has part: feature:2426604-2426810:1:exon
so has part: feature:2428364-2428477:1:exon
so has part: feature:2429316-2429431:1:exon
so has part: feature:2430291-2430411:1:exon
so has part: feature:2431275-2431412:1:exon
so has part: feature:2432661-2432871:1:exon
so has part: feature:2433124-2433302:1:exon
so has part: feature:2434144-2434308:1:exon
so has part: feature:2435455-2435546:1:exon
so has part: feature:2436112-2436203:1:exon
so has part: feature:2436655-2436832:1:exon
so has part: feature:2437668-2437847:1:exon
so has part: feature:2438574-2438733:1:exon
so has part: feature:2439791-2439970:1:exon
so has part: feature:2440922-2441064:1:exon
so has part: feature:2441259-2441356:1:exon
so has part: feature:2442308-2442540:1:exon
so has part: feature:2444147-2444281:1:exon
so has part: feature:2445479-2445679:1:exon
so has part: feature:2445811-2445954:1:exon
so has part: feature:2446929-2447079:1:exon
so has part: feature:2447793-2447949:1:exon
so has part: feature:2448038-2448191:1:exon
so has part: feature:2449214-2449365:1:exon
so has part: feature:2449701-2449806:1:exon
so has part: feature:2451281-2451454:1:exon

XP_048190897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2400522-2400580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2403083-2403174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2403884-2404033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2404633-2405510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2406215-2406384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2407390-2407578:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2407951-2408141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2409160-2409312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2411104-2411296:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2411525-2411787:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2412528-2412718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2413328-2413428:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2413734-2413905:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2414588-2414761:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2416384-2416578:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2419482-2419667:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2420594-2420686:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2421073-2421203:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2424088-2424181:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2425431-2425556:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2426604-2426810:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2428364-2428477:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2429316-2429431:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2430291-2430411:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2431275-2431412:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2432661-2432871:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2433124-2433302:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2434144-2434308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2435455-2435546:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2436112-2436203:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2436655-2436832:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2437668-2437847:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2438574-2438733:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2439791-2439970:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2440922-2441064:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2441259-2441356:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2442308-2442540:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2444147-2444281:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2445479-2445679:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2445811-2445954:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2446929-2447079:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2447793-2447949:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2448038-2448191:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2449214-2449365:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2449701-2449806:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2451281-2451454:1:exon

Xrn1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Xrn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2453140..2506147
location: region:2453140-2506147:1
so has part: feature:2453140-2506147:1:exon
subclass of: SO_0000010

125342647
type: Gene
SIO_000068: ncbigene

position:2453140:1
position: 2453140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506147:1
position: 2506147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2453140-2506147:1:exon

Xrn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Xrn1
product: 5'-3' exoribonuclease 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334945.1
SIO_010081: Xrn1
subclass of: SO_0000673
so part of: Xrn1
location: join(2453140..2453306,2458559..2458791,2459560..2459657,2460319..2460428,2460519..2460629,2462481..2462563,2463700..2463787,2464118..2464286,2465125..2465192,2465712..2465849,2466790..2466856,2467101..2467206,2468786..2468875,2469966..2470122,2470822..2470941,2472278..2472447,2473435..2473555,2473652..2473750,2474446..2474549,2475188..2475319,2476996..2477158,2478894..2479007,2481713..2481811,2483002..2483117,2483590..2483736,2484427..2484516,2484674..2484809,2487364..2487420,2487695..2487827,2488277..2488346,2488595..2488802,2490216..2490311,2492715..2492823,2495097..2495158,2498767..2498847,2499236..2499358,2500055..2500214,2501498..2501673,2502951..2503064,2503161..2503263,2503819..2503857,2504201..2504364,2505005..2506147)
location: region:2453140-2506147:1
so has part: feature:2453140-2453306:1:exon
so has part: feature:2458559-2458791:1:exon
so has part: feature:2459560-2459657:1:exon
so has part: feature:2460319-2460428:1:exon
so has part: feature:2460519-2460629:1:exon
so has part: feature:2462481-2462563:1:exon
so has part: feature:2463700-2463787:1:exon
so has part: feature:2464118-2464286:1:exon
so has part: feature:2465125-2465192:1:exon
so has part: feature:2465712-2465849:1:exon
so has part: feature:2466790-2466856:1:exon
so has part: feature:2467101-2467206:1:exon
so has part: feature:2468786-2468875:1:exon
so has part: feature:2469966-2470122:1:exon
so has part: feature:2470822-2470941:1:exon
so has part: feature:2472278-2472447:1:exon
so has part: feature:2473435-2473555:1:exon
so has part: feature:2473652-2473750:1:exon
so has part: feature:2474446-2474549:1:exon
so has part: feature:2475188-2475319:1:exon
so has part: feature:2476996-2477158:1:exon
so has part: feature:2478894-2479007:1:exon
so has part: feature:2481713-2481811:1:exon
so has part: feature:2483002-2483117:1:exon
so has part: feature:2483590-2483736:1:exon
so has part: feature:2484427-2484516:1:exon
so has part: feature:2484674-2484809:1:exon
so has part: feature:2487364-2487420:1:exon
so has part: feature:2487695-2487827:1:exon
so has part: feature:2488277-2488346:1:exon
so has part: feature:2488595-2488802:1:exon
so has part: feature:2490216-2490311:1:exon
so has part: feature:2492715-2492823:1:exon
so has part: feature:2495097-2495158:1:exon
so has part: feature:2498767-2498847:1:exon
so has part: feature:2499236-2499358:1:exon
so has part: feature:2500055-2500214:1:exon
so has part: feature:2501498-2501673:1:exon
so has part: feature:2502951-2503064:1:exon
so has part: feature:2503161-2503263:1:exon
so has part: feature:2503819-2503857:1:exon
so has part: feature:2504201-2504364:1:exon
so has part: feature:2505005-2506147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2453140-2453306:1:exon

position:2453306:1
position: 2453306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2458559-2458791:1:exon

position:2458559:1
position: 2458559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2458791:1
position: 2458791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2459560-2459657:1:exon

position:2459560:1
position: 2459560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2459657:1
position: 2459657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2460319-2460428:1:exon

position:2460319:1
position: 2460319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2460428:1
position: 2460428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2460519-2460629:1:exon

position:2460519:1
position: 2460519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2460629:1
position: 2460629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2462481-2462563:1:exon

position:2462481:1
position: 2462481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2462563:1
position: 2462563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2463700-2463787:1:exon

position:2463700:1
position: 2463700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2463787:1
position: 2463787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2464118-2464286:1:exon

position:2464118:1
position: 2464118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2464286:1
position: 2464286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2465125-2465192:1:exon

position:2465125:1
position: 2465125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2465192:1
position: 2465192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2465712-2465849:1:exon

position:2465712:1
position: 2465712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2465849:1
position: 2465849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2466790-2466856:1:exon

position:2466790:1
position: 2466790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2466856:1
position: 2466856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2467101-2467206:1:exon

position:2467101:1
position: 2467101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2467206:1
position: 2467206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2468786-2468875:1:exon

position:2468786:1
position: 2468786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2468875:1
position: 2468875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2469966-2470122:1:exon

position:2469966:1
position: 2469966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2470122:1
position: 2470122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2470822-2470941:1:exon

position:2470822:1
position: 2470822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2470941:1
position: 2470941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2472278-2472447:1:exon

position:2472278:1
position: 2472278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2472447:1
position: 2472447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2473435-2473555:1:exon