Perognathus longimembris pacificus isolate PPM17 chromosome 25, ASM2315922v1, whole genome shotgun sequence.
type: Entry
definition: Perognathus longimembris pacificus isolate PPM17 chromosome 25, ASM2315922v1, whole genome shotgun sequence.
sequence version: NC_063185.1
sequence date: 2022-05-19
sequence: sequence
division: CON
label: NC_063185.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA837248
dblink: SAMN26876106
keyword: WGS
keyword: RefSeq
source: Perognathus longimembris pacificus (Pacific pocket mouse)
organism: Perognathus longimembris pacificus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Perognathinae; Perognathus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM041288.1.\nAssembly name: ASM2315922v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the San Diego Zoo Wildlife\nAlliance on 2022/04/27. The original whole-genome shotgun project\nhas the accession JALGBO000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: San Diego Zoo Wildlife Alliance\nAssembly Date :: 2021\nAssembly Method :: Peregrine v. JUNE-2020; HiRise v.\n JULY-2020; Juicer v. DECEMBER-2020;\n Juicebox Assembly Tools v. DECEMBER-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 23.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Perognathus longimembris pacificus\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 25456301
topology: linear
so has quality: SO_0000987
location: 1..25456301
location: region:1-25456301:1
RO_0002162: 214514

NC_063185
type: RefSeq
SIO_000068: refseq

PRJNA837248
type: BioProject
SIO_000068: bioproject

SAMN26876106
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25456301:1
position: 25456301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25456301:1:source
so part of: sequence
organism: Perognathus longimembris pacificus
mol type: genomic DNA
isolate: PPM17
sub species: pacificus
chromosome: 25
sex: male
cell line: 21356
cell type: fibroblast
tissue type: trachea
dev stage: adult
country: USA: Santa Margarita
collection date: 2019
collected by: SDZWA

214514
type: Taxonomy
SIO_000068: taxonomy

LOC125342161
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 39662..44737
location: region:39662-44737:1
so has part: feature:39662-44737:1:exon
subclass of: SO_0000011

125342161
type: Gene
SIO_000068: ncbigene

position:39662:1
position: 39662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44737:1
position: 44737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39662-44737:1:exon

LOC125342161
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342161
product: uncharacterized LOC125342161, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007209154.1
SIO_010081: LOC125342161
subclass of: SO_0000673
so part of: LOC125342161
location: join(39662..39728,40610..40718,44725..44737)
location: region:39662-44737:1
so has part: feature:39662-39728:1:exon
so has part: feature:40610-40718:1:exon
so has part: feature:44725-44737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39662-39728:1:exon

position:39728:1
position: 39728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:40610-40718:1:exon

position:40610:1
position: 40610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40718:1
position: 40718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:44725-44737:1:exon

position:44725:1
position: 44725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342161
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342161
product: uncharacterized LOC125342161, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007209153.1
SIO_010081: LOC125342161
subclass of: SO_0000673
so part of: LOC125342161
location: join(39662..39728,40610..40718,41575..41593)
location: region:39662-41593:1
so has part: feature:39662-39728:1:exon
so has part: feature:40610-40718:1:exon
so has part: feature:41575-41593:1:exon

position:41593:1
position: 41593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39662-39728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40610-40718:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41575-41593:1:exon

position:41575:1
position: 41575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342267
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342267
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 41785..43656
location: region:41785-43656:1
so has part: feature:41785-43656:1:exon
subclass of: SO_0000573

125342267
type: Gene
SIO_000068: ncbigene

position:41785:1
position: 41785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43656:1
position: 43656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41785-43656:1:exon

LOC125342267
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 214514
gene: LOC125342267
product: 18S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01960
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007209203.1
SIO_010081: LOC125342267
subclass of: SO_0000673
so part of: LOC125342267
location: 41785..43656
location: region:41785-43656:1
so has part: feature:41785-43656:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41785-43656:1:exon

LOC125342270
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342270
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 45264..45416
location: region:45264-45416:1
so has part: feature:45264-45416:1:exon
subclass of: SO_0000573

125342270
type: Gene
SIO_000068: ncbigene

position:45264:1
position: 45264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45416:1
position: 45416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45264-45416:1:exon

LOC125342270
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 214514
gene: LOC125342270
product: 5.8S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007209205.1
SIO_010081: LOC125342270
subclass of: SO_0000673
so part of: LOC125342270
location: 45264..45416
location: region:45264-45416:1
so has part: feature:45264-45416:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45264-45416:1:exon

LOC125341752
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 45606..47630
location: region:45606-47630:1
so has part: feature:45606-47630:1:exon
subclass of: SO_0000010

125341752
type: Gene
SIO_000068: ncbigene

position:45606:1
position: 45606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47630:1
position: 47630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45606-47630:1:exon

LOC125341752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125341752
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048333858.1
SIO_010081: LOC125341752
subclass of: SO_0000673
so part of: LOC125341752
location: join(45606..46072,46706..46737,46914..47630)
location: region:45606-47630:1
so has part: feature:45606-46072:1:exon
so has part: feature:46706-46737:1:exon
so has part: feature:46914-47630:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45606-46072:1:exon

position:46072:1
position: 46072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:46706-46737:1:exon

position:46706:1
position: 46706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46737:1
position: 46737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:46914-47630:1:exon

position:46914:1
position: 46914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125341752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125341752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MTFSRRARERVPGRTHAAAAGHECARGPVPRGPARRGGRPPRDAAVGCSRQTRALSARSVPRAVRVARAAPGPARTHARCVSLSRRLVSLPRRSSSGRSSGRGAFPVPWGRRHPPFAAARPRRPPPLRREGVLWAAGRGTSGPPGVTAPLRQQLSPNPGAEEARTRRRALPPPGALPPRGGSPARGLPSARGAPVSQGVRAAPPTARPLLHPRLPFSRGVRGRGGLSSVRPGERRAVGSGGGGSSSHAPLPFPPGGMGRSERTGSAAMSATHPTRLETRTKESNACASRGLARKPPWRNEGEGRRGRSRAGRAAARSGGVGWRSAPPPPCRTVPPSPAPVSPPRRPRWDPEASPVRRGRTTGPSRPPRRGGGA
SIO_010081: LOC125341752
subclass of: SO_0000673
so part of: LOC125341752
location: join(45700..46072,46706..46737,46914..47630)
location: region:45700-47630:1
so has part: feature:45700-46072:1:exon
so has part: feature:46706-46737:1:exon
so has part: feature:46914-47630:1:exon

XP_048189815.1
type: Protein
SIO_000068: ncbiprotein

position:45700:1
position: 45700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45700-46072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46706-46737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46914-47630:1:exon

LOC125342265
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342265
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 99963..101834
location: region:99963-101834:1
so has part: feature:99963-101834:1:exon
subclass of: SO_0000573

125342265
type: Gene
SIO_000068: ncbigene

position:99963:1
position: 99963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101834:1
position: 101834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99963-101834:1:exon

LOC125342265
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 214514
gene: LOC125342265
product: 18S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01960
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007209201.1
SIO_010081: LOC125342265
subclass of: SO_0000673
so part of: LOC125342265
location: 99963..101834
location: region:99963-101834:1
so has part: feature:99963-101834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99963-101834:1:exon

LOC125342253
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342253
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 103486..103638
location: region:103486-103638:1
so has part: feature:103486-103638:1:exon
subclass of: SO_0000573

125342253
type: Gene
SIO_000068: ncbigene

position:103486:1
position: 103486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103638:1
position: 103638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103486-103638:1:exon

LOC125342253
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 214514
gene: LOC125342253
product: 5.8S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007209189.1
SIO_010081: LOC125342253
subclass of: SO_0000673
so part of: LOC125342253
location: 103486..103638
location: region:103486-103638:1
so has part: feature:103486-103638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103486-103638:1:exon

LOC125342269
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342269
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 104323..109208
location: region:104323-109208:1
so has part: feature:104323-109208:1:exon
subclass of: SO_0000573

125342269
type: Gene
SIO_000068: ncbigene

position:104323:1
position: 104323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109208:1
position: 109208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104323-109208:1:exon

LOC125342269
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 214514
gene: LOC125342269
product: 28S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF02543
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007209204.1
SIO_010081: LOC125342269
subclass of: SO_0000673
so part of: LOC125342269
location: 104323..109208
location: region:104323-109208:1
so has part: feature:104323-109208:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104323-109208:1:exon

LOC125342163
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342163
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(114509..132292)
location: region:114509-132292:-1
so has part: feature:114509-132292:-1:exon
subclass of: SO_0000011

125342163
type: Gene
SIO_000068: ncbigene

position:114509:-1
position: 114509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132292:-1
position: 132292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114509-132292:-1:exon

LOC125342163
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342163
product: uncharacterized LOC125342163
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007209156.1
SIO_010081: LOC125342163
subclass of: SO_0000673
so part of: LOC125342163
location: complement(join(114509..114520,128808..128818,132084..132292))
location: region:114509-132292:-1
so has part: feature:132084-132292:-1:exon
so has part: feature:128808-128818:-1:exon
so has part: feature:114509-114520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132084-132292:-1:exon

position:132084:-1
position: 132084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:128808-128818:-1:exon

position:128808:-1
position: 128808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128818:-1
position: 128818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:114509-114520:-1:exon

position:114520:-1
position: 114520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125342162
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 127182..132069
location: region:127182-132069:1
so has part: feature:127182-132069:1:exon
subclass of: SO_0000011

125342162
type: Gene
SIO_000068: ncbigene

position:127182:1
position: 127182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132069:1
position: 132069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127182-132069:1:exon

LOC125342162
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342162
product: uncharacterized LOC125342162
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007209155.1
SIO_010081: LOC125342162
subclass of: SO_0000673
so part of: LOC125342162
location: join(127182..127247,128139..128247,132057..132069)
location: region:127182-132069:1
so has part: feature:127182-127247:1:exon
so has part: feature:128139-128247:1:exon
so has part: feature:132057-132069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127182-127247:1:exon

position:127247:1
position: 127247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:128139-128247:1:exon

position:128139:1
position: 128139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128247:1
position: 128247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:132057-132069:1:exon

position:132057:1
position: 132057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342266
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342266
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 129321..131192
location: region:129321-131192:1
so has part: feature:129321-131192:1:exon
subclass of: SO_0000573

125342266
type: Gene
SIO_000068: ncbigene

position:129321:1
position: 129321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131192:1
position: 131192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129321-131192:1:exon

LOC125342266
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 214514
gene: LOC125342266
product: 18S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01960
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007209202.1
SIO_010081: LOC125342266
subclass of: SO_0000673
so part of: LOC125342266
location: 129321..131192
location: region:129321-131192:1
so has part: feature:129321-131192:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129321-131192:1:exon

LOC125342264
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342264
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 132631..132783
location: region:132631-132783:1
so has part: feature:132631-132783:1:exon
subclass of: SO_0000573

125342264
type: Gene
SIO_000068: ncbigene

position:132631:1
position: 132631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132783:1
position: 132783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132631-132783:1:exon

LOC125342264
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 214514
gene: LOC125342264
product: 5.8S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007209200.1
SIO_010081: LOC125342264
subclass of: SO_0000673
so part of: LOC125342264
location: 132631..132783
location: region:132631-132783:1
so has part: feature:132631-132783:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132631-132783:1:exon

LOC125342159
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 132960..135155
location: region:132960-135155:1
so has part: feature:132960-135155:1:exon
subclass of: SO_0000010

125342159
type: Gene
SIO_000068: ncbigene

position:132960:1
position: 132960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135155:1
position: 135155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132960-135155:1:exon

LOC125342159
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342159
product: basic salivary proline-rich protein 2-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334298.1
SIO_010081: LOC125342159
subclass of: SO_0000673
so part of: LOC125342159
location: join(132960..133439,134085..134098,134243..135155)
location: region:132960-135155:1
so has part: feature:132960-133439:1:exon
so has part: feature:134085-134098:1:exon
so has part: feature:134243-135155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132960-133439:1:exon

position:133439:1
position: 133439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134085-134098:1:exon

position:134085:1
position: 134085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134098:1
position: 134098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:134243-135155:1:exon

position:134243:1
position: 134243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic salivary proline-rich protein 2-like
translation: MTFSRRARERVPGRTRAAAAGRERARGPVPRGPARRGGRPPRDAAVGCSRQTRALSVRSVPRAVRVARAALGPARTHARCVSLSRRLVSLPRRSSSGRSSGRGAFPVPWGRRHPPFAAARPRRPPPRRGWGRRRAGEPQAPRVLQPRSGSSSRRIPGPRKPGPVAALSPLPALSPRAGGPPRGGSPPRGARRCLRGAGPPIPRRDRSSTPASRSRGGSGGGADCPQCAPGASRRRVRGGRRATRPFLSLRGGWGGASARGRR
SIO_010081: LOC125342159
subclass of: SO_0000673
so part of: LOC125342159
location: join(133061..133439,134085..134098,134243..134638)
location: region:133061-134638:1
so has part: feature:133061-133439:1:exon
so has part: feature:134085-134098:1:exon
so has part: feature:134243-134638:1:exon

XP_048190255.1
type: Protein
SIO_000068: ncbiprotein

position:133061:1
position: 133061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134638:1
position: 134638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133061-133439:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134085-134098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134243-134638:1:exon

LOC125342168
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(223207..224172)
location: region:223207-224172:-1
so has part: feature:223207-224172:-1:exon

125342168
type: Gene
SIO_000068: ncbigene

position:223207:-1
position: 223207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224172:-1
position: 224172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223207-224172:-1:exon

LOC125342168
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342168
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342168
subclass of: SO_0000673
so part of: LOC125342168
location: complement(223207..224172)
location: region:223207-224172:-1
so has part: feature:223207-224172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:223207-224172:-1:exon

LOC125342083
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 277101..303118
location: region:277101-303118:1
so has part: feature:277101-303118:1:exon
subclass of: SO_0000011

125342083
type: Gene
SIO_000068: ncbigene

position:277101:1
position: 277101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303118:1
position: 303118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277101-303118:1:exon

LOC125342083
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342083
product: uncharacterized LOC125342083
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007209139.1
SIO_010081: LOC125342083
subclass of: SO_0000673
so part of: LOC125342083
location: join(277101..277111,284674..284677,302931..303118)
location: region:277101-303118:1
so has part: feature:277101-277111:1:exon
so has part: feature:284674-284677:1:exon
so has part: feature:302931-303118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277101-277111:1:exon

position:277111:1
position: 277111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:284674-284677:1:exon

position:284674:1
position: 284674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284677:1
position: 284677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:302931-303118:1:exon

position:302931:1
position: 302931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342058
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342058
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 493174..494402
location: region:493174-494402:1
so has part: feature:493174-494402:1:exon

125342058
type: Gene
SIO_000068: ncbigene

position:493174:1
position: 493174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494402:1
position: 494402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493174-494402:1:exon

LOC125342058
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342058
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 44% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC125342058
subclass of: SO_0000673
so part of: LOC125342058
location: 493174..493690
location: region:493174-493690:1
so has part: feature:493174-493690:1:exon

position:493690:1
position: 493690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493174-493690:1:exon

LOC125342058
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342058
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 44% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC125342058
subclass of: SO_0000673
so part of: LOC125342058
location: 494131..494402
location: region:494131-494402:1
so has part: feature:494131-494402:1:exon

position:494131:1
position: 494131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494131-494402:1:exon

LOC125341949
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 665488..666212
location: region:665488-666212:1
so has part: feature:665488-666212:1:exon
subclass of: SO_0000010

125341949
type: Gene
SIO_000068: ncbigene

position:665488:1
position: 665488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666212:1
position: 666212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665488-666212:1:exon

LOC125341949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125341949
product: high mobility group protein B2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334076.1
SIO_010081: LOC125341949
subclass of: SO_0000673
so part of: LOC125341949
location: 665488..666212
location: region:665488-666212:1
so has part: feature:665488-666212:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:665488-666212:1:exon

LOC125341949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125341949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group protein B2-like
translation: MGKGDPSTPRGKTCREEHKKKHPDSLVNFAEFSKKCSERWKTMSAKENSKFEDLAKSDKAHYDREMKNHVLPKGDKGKKKDPNAPKRPPSAFFLFCSEHRPKIKGEHPGLSTGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYCAKDKSEAGKKGPDRLTGSKKNEPEDEEEEEEEEEEEDEEEENEDEE
SIO_010081: LOC125341949
subclass of: SO_0000673
so part of: LOC125341949
location: 665488..666087
location: region:665488-666087:1
so has part: feature:665488-666087:1:exon

XP_048190033.1
type: Protein
SIO_000068: ncbiprotein

position:666087:1
position: 666087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665488-666087:1:exon

LOC125341753
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 862519..870058
location: region:862519-870058:1
so has part: feature:862519-870058:1:exon
subclass of: SO_0000010

125341753
type: Gene
SIO_000068: ncbigene

position:862519:1
position: 862519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870058:1
position: 870058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862519-870058:1:exon

LOC125341753
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125341753
product: rho GTPase-activating protein 20-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048333859.1
SIO_010081: LOC125341753
subclass of: SO_0000673
so part of: LOC125341753
location: join(862519..862590,865616..865682,866163..866345,867344..867522,868864..869025,869960..870058)
location: region:862519-870058:1
so has part: feature:862519-862590:1:exon
so has part: feature:865616-865682:1:exon
so has part: feature:866163-866345:1:exon
so has part: feature:867344-867522:1:exon
so has part: feature:868864-869025:1:exon
so has part: feature:869960-870058:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:862519-862590:1:exon

position:862590:1
position: 862590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:865616-865682:1:exon

position:865616:1
position: 865616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865682:1
position: 865682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:866163-866345:1:exon

position:866163:1
position: 866163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866345:1
position: 866345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:867344-867522:1:exon

position:867344:1
position: 867344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867522:1
position: 867522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:868864-869025:1:exon

position:868864:1
position: 868864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869025:1
position: 869025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:869960-870058:1:exon

position:869960:1
position: 869960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125341753
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125341753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 20-like
translation: MNQIGETAFMARRSRQHDTHFVEEDLMEQSYPPMGTRFILKPRQPACGQQANNSEQKKEGRGRSYLNWLFGRRSSTAKEKPPVKSSPPQSGLLFGAPLKAACKNGNVPSPILDMIAFIMQEGRLTEGIFRKSGSVRACRALKDRLIGGEPVDLHEESVHVVASVLKITAMLIMVASAVLGQYECIRRDKSNEWDTAHL
SIO_010081: LOC125341753
subclass of: SO_0000673
so part of: LOC125341753
location: join(866189..866345,867344..867522,868864..869025,869960..870058)
location: region:866189-870058:1
so has part: feature:866189-866345:1:exon
so has part: feature:867344-867522:1:exon
so has part: feature:868864-869025:1:exon
so has part: feature:869960-870058:1:exon

XP_048189816.1
type: Protein
SIO_000068: ncbiprotein

position:866189:1
position: 866189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:866189-866345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867344-867522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:868864-869025:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:869960-870058:1:exon

LOC125342210
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 871188..873862
location: region:871188-873862:1
so has part: feature:871188-873862:1:exon
subclass of: SO_0000010

125342210
type: Gene
SIO_000068: ncbigene

position:871188:1
position: 871188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873862:1
position: 873862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871188-873862:1:exon

LOC125342210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342210
product: rho GTPase-activating protein 20-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048334359.1
SIO_010081: LOC125342210
subclass of: SO_0000673
so part of: LOC125342210
location: join(871188..871350,872275..872464,873773..873862)
location: region:871188-873862:1
so has part: feature:871188-871350:1:exon
so has part: feature:872275-872464:1:exon
so has part: feature:873773-873862:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:871188-871350:1:exon

position:871350:1
position: 871350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:872275-872464:1:exon

position:872275:1
position: 872275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872464:1
position: 872464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:873773-873862:1:exon

position:873773:1
position: 873773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 20-like
translation: MYETWLRIMNEDNEEEKIIMAQSLLKMLPRANQLLLKHLFEMLSQIHQNSSINLMTSYNLAVCTATSLMAPPPDARAGFDIELMRKVVLVQFLIENTAQIFTEDFPVGW
SIO_010081: LOC125342210
subclass of: SO_0000673
so part of: LOC125342210
location: join(871283..871350,872275..872464,873773..873844)
location: region:871283-873844:1
so has part: feature:871283-871350:1:exon
so has part: feature:872275-872464:1:exon
so has part: feature:873773-873844:1:exon

XP_048190316.1
type: Protein
SIO_000068: ncbiprotein

position:871283:1
position: 871283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873844:1
position: 873844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871283-871350:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872275-872464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873773-873844:1:exon

LOC125342046
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 893305..894240
location: region:893305-894240:1
so has part: feature:893305-894240:1:exon
subclass of: SO_0000010

125342046
type: Gene
SIO_000068: ncbigene

position:893305:1
position: 893305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894240:1
position: 894240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893305-894240:1:exon

LOC125342046
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342046
product: olfactory receptor 4F15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
transcript id: XM_048334180.1
SIO_010081: LOC125342046
subclass of: SO_0000673
so part of: LOC125342046
location: 893305..894240
location: region:893305-894240:1
so has part: feature:893305-894240:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:893305-894240:1:exon

LOC125342046
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 4F15-like
translation: MYETTYSEVSEFIFLGISTYRLVRRFLLAFSTVFYVIIILGNLSIVLTVTLDFHLHSPIYFLLGNLSFIDLFLSTLTVPKMISDLFSGHNTISFQGCVIQMFLLHVLGASEMVRLIVAMERYLAICKPLHYLRIMSPRMCSSLLFGVWVIGLIHSVIQLAFVVHLPLCGPNEIDSFYCDLPYVIKLACIDTYRMEFLVTANSGLISVGTFFVLLISFTFILFTVWKHSAARLHKAFSTLSAPISVVVLFFGPCIFVYMWPFPIVPVDKLLAILGFMITPILNPAMYTLRNKDMKLPMRRFKGLLMSLKRIS
SIO_010081: LOC125342046
subclass of: SO_0000673
so part of: LOC125342046
location: 893305..894240
location: region:893305-894240:1
so has part: feature:893305-894240:1:exon

XP_048190137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:893305-894240:1:exon

LOC125341913
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 895717..898320
location: region:895717-898320:1
so has part: feature:895717-898320:1:exon

125341913
type: Gene
SIO_000068: ncbigene

position:895717:1
position: 895717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898320:1
position: 898320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895717-898320:1:exon

LOC125341913
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341913
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125341913
subclass of: SO_0000673
so part of: LOC125341913
location: 895717..898320
location: region:895717-898320:1
so has part: feature:895717-898320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:895717-898320:1:exon

LOC125341755
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 948173..950939
location: region:948173-950939:1
so has part: feature:948173-950939:1:exon

125341755
type: Gene
SIO_000068: ncbigene

position:948173:1
position: 948173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950939:1
position: 950939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948173-950939:1:exon

LOC125341755
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341755
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341755
subclass of: SO_0000673
so part of: LOC125341755
location: 948173..948460
location: region:948173-948460:1
so has part: feature:948173-948460:1:exon

position:948460:1
position: 948460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948173-948460:1:exon

LOC125341755
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341755
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341755
subclass of: SO_0000673
so part of: LOC125341755
location: 948746..948966
location: region:948746-948966:1
so has part: feature:948746-948966:1:exon

position:948746:1
position: 948746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948966:1
position: 948966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948746-948966:1:exon

LOC125341755
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341755
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341755
subclass of: SO_0000673
so part of: LOC125341755
location: 949479..949613
location: region:949479-949613:1
so has part: feature:949479-949613:1:exon

position:949479:1
position: 949479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949613:1
position: 949613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949479-949613:1:exon

LOC125341755
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341755
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341755
subclass of: SO_0000673
so part of: LOC125341755
location: 949920..950040
location: region:949920-950040:1
so has part: feature:949920-950040:1:exon

position:949920:1
position: 949920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950040:1
position: 950040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949920-950040:1:exon

LOC125341755
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341755
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341755
subclass of: SO_0000673
so part of: LOC125341755
location: 950216..950288
location: region:950216-950288:1
so has part: feature:950216-950288:1:exon

position:950216:1
position: 950216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950288:1
position: 950288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950216-950288:1:exon

LOC125341755
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341755
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341755
subclass of: SO_0000673
so part of: LOC125341755
location: 950917..950939
location: region:950917-950939:1
so has part: feature:950917-950939:1:exon

position:950917:1
position: 950917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950917-950939:1:exon

LOC125342119
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1011758..1012985
location: region:1011758-1012985:1
so has part: feature:1011758-1012985:1:exon

125342119
type: Gene
SIO_000068: ncbigene

position:1011758:1
position: 1011758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012985:1
position: 1012985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1011758-1012985:1:exon

LOC125342119
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342119
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342119
subclass of: SO_0000673
so part of: LOC125342119
location: 1011758..1012985
location: region:1011758-1012985:1
so has part: feature:1011758-1012985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1011758-1012985:1:exon

Trnaa-cgc
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Trnaa-cgc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1088575..1088646
location: region:1088575-1088646:1
so has part: feature:1088575-1088646:1:exon
subclass of: SO_0000663

125342272
type: Gene
SIO_000068: ncbigene

position:1088575:1
position: 1088575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088646:1
position: 1088646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1088575-1088646:1:exon

Trnaa-cgc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 214514
gene: Trnaa-cgc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA alanine (anticodon CGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1088607..1088609,aa:Ala,seq:cgc)
SIO_010081: Trnaa-cgc
subclass of: SO_0000673
so part of: Trnaa-cgc
location: 1088575..1088646
location: region:1088575-1088646:1
so has part: feature:1088575-1088646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1088575-1088646:1:exon

LOC125342029
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1384737..1385462)
location: region:1384737-1385462:-1
so has part: feature:1384737-1385462:-1:exon

125342029
type: Gene
SIO_000068: ncbigene

position:1384737:-1
position: 1384737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1385462:-1
position: 1385462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1384737-1385462:-1:exon

LOC125342029
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342029
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342029
subclass of: SO_0000673
so part of: LOC125342029
location: complement(1384737..1385462)
location: region:1384737-1385462:-1
so has part: feature:1384737-1385462:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1384737-1385462:-1:exon

LOC125341757
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1412924..1433555
location: region:1412924-1433555:1
so has part: feature:1412924-1433555:1:exon

125341757
type: Gene
SIO_000068: ncbigene

position:1412924:1
position: 1412924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1433555:1
position: 1433555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1412924-1433555:1:exon

LOC125341757
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341757
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125341757
subclass of: SO_0000673
so part of: LOC125341757
location: 1412924..1413056
location: region:1412924-1413056:1
so has part: feature:1412924-1413056:1:exon

position:1413056:1
position: 1413056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1412924-1413056:1:exon

LOC125341757
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341757
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125341757
subclass of: SO_0000673
so part of: LOC125341757
location: 1431553..1431690
location: region:1431553-1431690:1
so has part: feature:1431553-1431690:1:exon

position:1431553:1
position: 1431553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431690:1
position: 1431690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1431553-1431690:1:exon

LOC125341757
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341757
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125341757
subclass of: SO_0000673
so part of: LOC125341757
location: 1432461..1433555
location: region:1432461-1433555:1
so has part: feature:1432461-1433555:1:exon

position:1432461:1
position: 1432461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1432461-1433555:1:exon

LOC125341758
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1468766..1469718
location: region:1468766-1469718:1
so has part: feature:1468766-1469718:1:exon

125341758
type: Gene
SIO_000068: ncbigene

position:1468766:1
position: 1468766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469718:1
position: 1469718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1468766-1469718:1:exon

LOC125341758
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341758
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 70% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125341758
subclass of: SO_0000673
so part of: LOC125341758
location: 1468766..1469718
location: region:1468766-1469718:1
so has part: feature:1468766-1469718:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1468766-1469718:1:exon

LOC125341759
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341759
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1487622..1515417)
location: region:1487622-1515417:-1
so has part: feature:1487622-1515417:-1:exon

125341759
type: Gene
SIO_000068: ncbigene

position:1487622:-1
position: 1487622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1515417:-1
position: 1515417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1487622-1515417:-1:exon

LOC125341759
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341759
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125341759
subclass of: SO_0000673
so part of: LOC125341759
location: complement(1487622..1487733)
location: region:1487622-1487733:-1
so has part: feature:1487622-1487733:-1:exon

position:1487733:-1
position: 1487733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1487622-1487733:-1:exon

LOC125341759
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341759
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125341759
subclass of: SO_0000673
so part of: LOC125341759
location: complement(1490782..1490949)
location: region:1490782-1490949:-1
so has part: feature:1490782-1490949:-1:exon

position:1490782:-1
position: 1490782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1490949:-1
position: 1490949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1490782-1490949:-1:exon

LOC125341759
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341759
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125341759
subclass of: SO_0000673
so part of: LOC125341759
location: complement(1491589..1491744)
location: region:1491589-1491744:-1
so has part: feature:1491589-1491744:-1:exon

position:1491589:-1
position: 1491589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1491744:-1
position: 1491744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1491589-1491744:-1:exon

LOC125341759
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341759
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125341759
subclass of: SO_0000673
so part of: LOC125341759
location: complement(1491928..1492074)
location: region:1491928-1492074:-1
so has part: feature:1491928-1492074:-1:exon

position:1491928:-1
position: 1491928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1492074:-1
position: 1492074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1491928-1492074:-1:exon

LOC125341759
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341759
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125341759
subclass of: SO_0000673
so part of: LOC125341759
location: complement(1498889..1498909)
location: region:1498889-1498909:-1
so has part: feature:1498889-1498909:-1:exon

position:1498889:-1
position: 1498889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498909:-1
position: 1498909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1498889-1498909:-1:exon

LOC125341759
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341759
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125341759
subclass of: SO_0000673
so part of: LOC125341759
location: complement(1507946..1507951)
location: region:1507946-1507951:-1
so has part: feature:1507946-1507951:-1:exon

position:1507946:-1
position: 1507946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1507951:-1
position: 1507951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1507946-1507951:-1:exon

LOC125341759
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341759
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125341759
subclass of: SO_0000673
so part of: LOC125341759
location: complement(1515293..1515417)
location: region:1515293-1515417:-1
so has part: feature:1515293-1515417:-1:exon

position:1515293:-1
position: 1515293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1515293-1515417:-1:exon

LOC125342259
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342259
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1569568..1569774
location: region:1569568-1569774:1
so has part: feature:1569568-1569774:1:exon
subclass of: SO_0000578

125342259
type: Gene
SIO_000068: ncbigene

position:1569568:1
position: 1569568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1569774:1
position: 1569774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1569568-1569774:1:exon

LOC125342259
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snoRNA
gene: LOC125342259
product: small nucleolar RNA SNORA73 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00045
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007209195.1
SIO_010081: LOC125342259
subclass of: SO_0000673
so part of: LOC125342259
location: 1569568..1569774
location: region:1569568-1569774:1
so has part: feature:1569568-1569774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1569568-1569774:1:exon

LOC125341760
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341760
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1763754..1787906)
location: region:1763754-1787906:-1
so has part: feature:1763754-1787906:-1:exon

125341760
type: Gene
SIO_000068: ncbigene

position:1763754:-1
position: 1763754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1787906:-1
position: 1787906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1763754-1787906:-1:exon

LOC125341760
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341760
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341760
subclass of: SO_0000673
so part of: LOC125341760
location: complement(1763754..1764683)
location: region:1763754-1764683:-1
so has part: feature:1763754-1764683:-1:exon

position:1764683:-1
position: 1764683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1763754-1764683:-1:exon

LOC125341760
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341760
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341760
subclass of: SO_0000673
so part of: LOC125341760
location: complement(1765601..1765732)
location: region:1765601-1765732:-1
so has part: feature:1765601-1765732:-1:exon

position:1765601:-1
position: 1765601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1765732:-1
position: 1765732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1765601-1765732:-1:exon

LOC125341760
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341760
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341760
subclass of: SO_0000673
so part of: LOC125341760
location: complement(1766868..1767095)
location: region:1766868-1767095:-1
so has part: feature:1766868-1767095:-1:exon

position:1766868:-1
position: 1766868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1767095:-1
position: 1767095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1766868-1767095:-1:exon

LOC125341760
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341760
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341760
subclass of: SO_0000673
so part of: LOC125341760
location: complement(1767605..1767615)
location: region:1767605-1767615:-1
so has part: feature:1767605-1767615:-1:exon

position:1767605:-1
position: 1767605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1767615:-1
position: 1767615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1767605-1767615:-1:exon

LOC125341760
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341760
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341760
subclass of: SO_0000673
so part of: LOC125341760
location: complement(1769697..1769989)
location: region:1769697-1769989:-1
so has part: feature:1769697-1769989:-1:exon

position:1769697:-1
position: 1769697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1769989:-1
position: 1769989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1769697-1769989:-1:exon

LOC125341760
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341760
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341760
subclass of: SO_0000673
so part of: LOC125341760
location: complement(1770179..1770222)
location: region:1770179-1770222:-1
so has part: feature:1770179-1770222:-1:exon

position:1770179:-1
position: 1770179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1770222:-1
position: 1770222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1770179-1770222:-1:exon

LOC125341760
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341760
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341760
subclass of: SO_0000673
so part of: LOC125341760
location: complement(1781383..1781610)
location: region:1781383-1781610:-1
so has part: feature:1781383-1781610:-1:exon

position:1781383:-1
position: 1781383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1781610:-1
position: 1781610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1781383-1781610:-1:exon

LOC125341760
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341760
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341760
subclass of: SO_0000673
so part of: LOC125341760
location: complement(1782666..1783007)
location: region:1782666-1783007:-1
so has part: feature:1782666-1783007:-1:exon

position:1782666:-1
position: 1782666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1783007:-1
position: 1783007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1782666-1783007:-1:exon

LOC125341760
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341760
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341760
subclass of: SO_0000673
so part of: LOC125341760
location: complement(1784124..1784412)
location: region:1784124-1784412:-1
so has part: feature:1784124-1784412:-1:exon

position:1784124:-1
position: 1784124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1784412:-1
position: 1784412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1784124-1784412:-1:exon

LOC125341760
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341760
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341760
subclass of: SO_0000673
so part of: LOC125341760
location: complement(1787902..1787906)
location: region:1787902-1787906:-1
so has part: feature:1787902-1787906:-1:exon

position:1787902:-1
position: 1787902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1787902-1787906:-1:exon

LOC125341762
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341762
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1788284..1804006)
location: region:1788284-1804006:-1
so has part: feature:1788284-1804006:-1:exon
subclass of: SO_0000010

125341762
type: Gene
SIO_000068: ncbigene

position:1788284:-1
position: 1788284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1804006:-1
position: 1804006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1788284-1804006:-1:exon

LOC125341762
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125341762
product: vomeronasal type-2 receptor 116-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_048333861.1
SIO_010081: LOC125341762
subclass of: SO_0000673
so part of: LOC125341762
location: complement(join(1788284..1788351,1790057..1790959,1792075..1792198,1793381..1793599,1794298..1794600,1794874..1795089,1796175..1796463,1796716..1796747,1797160..1797236,1797559..1797569,1799710..1799838,1803939..1804006))
location: region:1788284-1804006:-1
so has part: feature:1803939-1804006:-1:exon
so has part: feature:1799710-1799838:-1:exon
so has part: feature:1797559-1797569:-1:exon
so has part: feature:1797160-1797236:-1:exon
so has part: feature:1796716-1796747:-1:exon
so has part: feature:1796175-1796463:-1:exon
so has part: feature:1794874-1795089:-1:exon
so has part: feature:1794298-1794600:-1:exon
so has part: feature:1793381-1793599:-1:exon
so has part: feature:1792075-1792198:-1:exon
so has part: feature:1790057-1790959:-1:exon
so has part: feature:1788284-1788351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1803939-1804006:-1:exon

position:1803939:-1
position: 1803939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1799710-1799838:-1:exon

position:1799710:-1
position: 1799710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1799838:-1
position: 1799838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1797559-1797569:-1:exon

position:1797559:-1
position: 1797559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1797569:-1
position: 1797569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1797160-1797236:-1:exon

position:1797160:-1
position: 1797160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1797236:-1
position: 1797236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1796716-1796747:-1:exon

position:1796716:-1
position: 1796716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1796747:-1
position: 1796747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1796175-1796463:-1:exon

position:1796175:-1
position: 1796175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1796463:-1
position: 1796463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1794874-1795089:-1:exon

position:1794874:-1
position: 1794874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1795089:-1
position: 1795089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1794298-1794600:-1:exon

position:1794298:-1
position: 1794298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1794600:-1
position: 1794600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1793381-1793599:-1:exon

position:1793381:-1
position: 1793381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1793599:-1
position: 1793599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1792075-1792198:-1:exon

position:1792075:-1
position: 1792075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1792198:-1
position: 1792198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1790057-1790959:-1:exon

position:1790057:-1
position: 1790057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1790959:-1
position: 1790959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1788284-1788351:-1:exon

position:1788351:-1
position: 1788351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125341762
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125341762
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vomeronasal type-2 receptor 116-like
translation: MCSWASEFFQRQIKAEVKVLKQSCFSTVKQRVHMDGDVMIASYFPLYILRVPSRDKDAPKHQKERLLLLRSQSKNIGDTVVANAFYLGILPLYTMSIPCFMDNRLLFIFKNYQFILALTFAIEEINKNPHLLHNLTLGFDFCNFEFDVWNELKSAILCLFGKYNTLNYTCMGDSKYTAVLTGPSGITSAKFGTLLNLYKFPQLSFGPFDQDLSDHYKFPALYQMAQKDTSMATAMVSLLIHFRWNWVGLLTLEDENGLWILPELKEEMAKNRVCDFVKAVNPSKYPGDSFLAHLWFVSFNCSYSKSDCVTWENCPHDASLDWLPRHVLDMNLSVDSYNIYNTVYTVAQALHEMLLHQTEVQTTGNRKGIVPSPAQLHPFLKKIQFHNPAGDQVIWDEKRKLEAEYDIVNIWNFPQGLHLEVKVGKFSPYAHQLSLSEEMIQWPIASAEPPHSVCSVSCGPGFRKAPQEGKAACCFDCTRCSENEMANGTDMEICVKCPDHQYANIQRNQCLQRATIFLAYGEPLGMALACMALGLSTLTALVLGVFLKHHNTPIVRANNQALSYILLISLIVCSLCSLLFIGCPNTVTCVLQQTTFGVAFTVAVSAVLAKTVTVVLAFKVTSPGRRMRCLLVSGAPNFIIPICTLIQVNLCGIWLGTSPPFIDTDTHSEHGHLIILCNKGSLTAFYCVLGYLGSLALASFTVAFLARNLPDTFNEAKLLTFSMLVFCSVWLTFLPVYHSAKGKVRVAVEVFSILASTAGLLGCIFAPKCYIILIRPDRNCLHGFKDKRDRSTLGPMFTLHSSSPTCSPSRTS
SIO_010081: LOC125341762
subclass of: SO_0000673
so part of: LOC125341762
location: complement(join(1788284..1788351,1790057..1790959,1792075..1792198,1793381..1793599,1794298..1794600,1794874..1795089,1796175..1796463,1796716..1796747,1797160..1797236,1797559..1797569,1799710..1799838,1803939..1804006))
location: region:1788284-1804006:-1
so has part: feature:1803939-1804006:-1:exon
so has part: feature:1799710-1799838:-1:exon
so has part: feature:1797559-1797569:-1:exon
so has part: feature:1797160-1797236:-1:exon
so has part: feature:1796716-1796747:-1:exon
so has part: feature:1796175-1796463:-1:exon
so has part: feature:1794874-1795089:-1:exon
so has part: feature:1794298-1794600:-1:exon
so has part: feature:1793381-1793599:-1:exon
so has part: feature:1792075-1792198:-1:exon
so has part: feature:1790057-1790959:-1:exon
so has part: feature:1788284-1788351:-1:exon

XP_048189818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1803939-1804006:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1799710-1799838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1797559-1797569:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1797160-1797236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1796716-1796747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1796175-1796463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1794874-1795089:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1794298-1794600:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1793381-1793599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1792075-1792198:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1790057-1790959:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1788284-1788351:-1:exon

LOC125341763
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2022687..2023673
location: region:2022687-2023673:1
so has part: feature:2022687-2023673:1:exon
subclass of: SO_0000010

125341763
type: Gene
SIO_000068: ncbigene

position:2022687:1
position: 2022687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2023673:1
position: 2023673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2022687-2023673:1:exon

LOC125341763
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125341763
product: complement component 1 Q subcomponent-binding protein, mitochondrial-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048333862.1
SIO_010081: LOC125341763
subclass of: SO_0000673
so part of: LOC125341763
location: 2022687..2023673
location: region:2022687-2023673:1
so has part: feature:2022687-2023673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2022687-2023673:1:exon

LOC125341763
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125341763
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: complement component 1 Q subcomponent-binding protein, mitochondrial-like
translation: MGSCCSLWTFGLLGVRSAAGQQRSLLWALEPCACGCGALHTEGEKAFVEFLTDEIKEENKIQKHKSLPKXSGAWELEVNGTEAKLIRKVSGEKSTVTFNINNSIPPTFDSEEEATQGQKVEEQEPELTSTPNFVVEVTKSDGKKALALECHYPEDEIGQEEEAESDIFSIKEVSFQATGDSEWKDTNYTLNTDSLDWALYDHLMDFLADQGVDNTFADELVELSTALEHQEYITFLEDLERFVKSQ
SIO_010081: LOC125341763
subclass of: SO_0000673
so part of: LOC125341763
location: 2022687..2023425
location: region:2022687-2023425:1
so has part: feature:2022687-2023425:1:exon

XP_048189819.1
type: Protein
SIO_000068: ncbiprotein

position:2023425:1
position: 2023425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2022687-2023425:1:exon

LOC125341764
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341764
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2085466..2086131)
location: region:2085466-2086131:-1
so has part: feature:2085466-2086131:-1:exon
subclass of: SO_0000010

125341764
type: Gene
SIO_000068: ncbigene

position:2085466:-1
position: 2085466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2086131:-1
position: 2086131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2085466-2086131:-1:exon

LOC125341764
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125341764
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T cell receptor alpha variable 9-2-like
SIO_010081: LOC125341764
subclass of: SO_0000673
so part of: LOC125341764
location: complement(join(2085466..2085944,2086056..2086131))
location: region:2085466-2086131:-1
so has part: feature:2086056-2086131:-1:exon
so has part: feature:2085466-2085944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2086056-2086131:-1:exon

position:2086056:-1
position: 2086056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2085466-2085944:-1:exon

position:2085944:-1
position: 2085944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125341764
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 214514
gene: LOC125341764
standard name: T cell receptor alpha variable 9-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
SIO_010081: LOC125341764
subclass of: SO_0000673
so part of: LOC125341764
location: complement(join(2085466..2085944,2086056..2086131))
location: region:2085466-2086131:-1
so has part: feature:2086056-2086131:-1:exon
so has part: feature:2085466-2085944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2086056-2086131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2085466-2085944:-1:exon

LOC125342005
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2105324..2106427
location: region:2105324-2106427:1
so has part: feature:2105324-2106427:1:exon
subclass of: SO_0000010

125342005
type: Gene
SIO_000068: ncbigene

position:2105324:1
position: 2105324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2106427:1
position: 2106427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2105324-2106427:1:exon

LOC125342005
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342005
product: olfactory receptor 4K17-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334142.1
SIO_010081: LOC125342005
subclass of: SO_0000673
so part of: LOC125342005
location: 2105324..2106427
location: region:2105324-2106427:1
so has part: feature:2105324-2106427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2105324-2106427:1:exon

LOC125342005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 4K17-like
translation: MDTENQSVVYEFILLGLGNSSNMQYLLFIIFLLLYLITVCGNIAIMILVITDPHLHSPMYFFLANLSFVDMWLSSNATPKMIQDMLKKNKTISFGGCMSQIFFAHFIAALEMVILVIMAYDRYVAICKPLHYSAIMSLQKCIGLVLTAWIVGLVHAISQSIVIVQLPFCGPKIIDSFFCDRPLVINLACMDSYKIKILMNIDCGVVAVTCFILLLISYTYILTTVHHNSKTGASKALSTCTAHITVVVLFFGPCLFIYVWPLNITWMDKFLAVFYSIITPLLNPAIYTLRNKEMRKSIKRFINQYVNSKSKT
SIO_010081: LOC125342005
subclass of: SO_0000673
so part of: LOC125342005
location: 2105324..2106262
location: region:2105324-2106262:1
so has part: feature:2105324-2106262:1:exon

XP_048190099.1
type: Protein
SIO_000068: ncbiprotein

position:2106262:1
position: 2106262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2105324-2106262:1:exon

LOC125341765
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2120310..2121005)
location: region:2120310-2121005:-1
so has part: feature:2120310-2121005:-1:exon

125341765
type: Gene
SIO_000068: ncbigene

position:2120310:-1
position: 2120310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2121005:-1
position: 2121005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2120310-2121005:-1:exon

LOC125341765
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341765
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125341765
subclass of: SO_0000673
so part of: LOC125341765
location: complement(2120310..2121005)
location: region:2120310-2121005:-1
so has part: feature:2120310-2121005:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2120310-2121005:-1:exon

LOC125341766
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341766
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2245807..2253364)
location: region:2245807-2253364:-1
so has part: feature:2245807-2253364:-1:exon

125341766
type: Gene
SIO_000068: ncbigene

position:2245807:-1
position: 2245807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2253364:-1
position: 2253364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2245807-2253364:-1:exon

LOC125341766
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341766
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC125341766
subclass of: SO_0000673
so part of: LOC125341766
location: complement(2245807..2245818)
location: region:2245807-2245818:-1
so has part: feature:2245807-2245818:-1:exon

position:2245818:-1
position: 2245818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2245807-2245818:-1:exon

LOC125341766
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341766
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC125341766
subclass of: SO_0000673
so part of: LOC125341766
location: complement(2246526..2247349)
location: region:2246526-2247349:-1
so has part: feature:2246526-2247349:-1:exon

position:2246526:-1
position: 2246526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2247349:-1
position: 2247349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2246526-2247349:-1:exon

LOC125341766
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341766
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC125341766
subclass of: SO_0000673
so part of: LOC125341766
location: complement(2253212..2253364)
location: region:2253212-2253364:-1
so has part: feature:2253212-2253364:-1:exon

position:2253212:-1
position: 2253212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2253212-2253364:-1:exon

LOC125341767
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2271284..2371545
location: region:2271284-2371545:1
so has part: feature:2271284-2371545:1:exon

125341767
type: Gene
SIO_000068: ncbigene

position:2271284:1
position: 2271284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2371545:1
position: 2371545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2271284-2371545:1:exon

LOC125341767
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341767
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125341767
subclass of: SO_0000673
so part of: LOC125341767
location: 2271284..2271429
location: region:2271284-2271429:1
so has part: feature:2271284-2271429:1:exon

position:2271429:1
position: 2271429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2271284-2271429:1:exon

LOC125341767
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341767
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125341767
subclass of: SO_0000673
so part of: LOC125341767
location: 2273173..2273233
location: region:2273173-2273233:1
so has part: feature:2273173-2273233:1:exon

position:2273173:1
position: 2273173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2273233:1
position: 2273233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2273173-2273233:1:exon

LOC125341767
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125341767
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125341767
subclass of: SO_0000673
so part of: LOC125341767
location: 2370676..2371545
location: region:2370676-2371545:1
so has part: feature:2370676-2371545:1:exon

position:2370676:1
position: 2370676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2370676-2371545:1:exon

LOC125342243
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342243
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2428823..2428929)
location: region:2428823-2428929:-1
so has part: feature:2428823-2428929:-1:exon
subclass of: SO_0000623

125342243
type: Gene
SIO_000068: ncbigene

position:2428823:-1
position: 2428823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2428929:-1
position: 2428929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2428823-2428929:-1:exon

LOC125342243
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snRNA
gene: LOC125342243
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007209181.1
SIO_010081: LOC125342243
subclass of: SO_0000673
so part of: LOC125342243
location: complement(2428823..2428929)
location: region:2428823-2428929:-1
so has part: feature:2428823-2428929:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2428823-2428929:-1:exon

Neurl1b
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Neurl1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2439690..2464697
location: region:2439690-2464697:1
so has part: feature:2439690-2464697:1:exon
subclass of: SO_0000010

125342121
type: Gene
SIO_000068: ncbigene

position:2439690:1
position: 2439690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2464697:1
position: 2464697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2439690-2464697:1:exon

Neurl1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Neurl1b
product: neuralized E3 ubiquitin protein ligase 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048334252.1
SIO_010081: Neurl1b
subclass of: SO_0000673
so part of: Neurl1b
location: join(2439690..2439879,2454303..2454872,2460596..2461315,2462423..2462548,2463751..2464697)
location: region:2439690-2464697:1
so has part: feature:2439690-2439879:1:exon
so has part: feature:2454303-2454872:1:exon
so has part: feature:2460596-2461315:1:exon
so has part: feature:2462423-2462548:1:exon
so has part: feature:2463751-2464697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2439690-2439879:1:exon

position:2439879:1
position: 2439879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2454303-2454872:1:exon

position:2454303:1
position: 2454303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2454872:1
position: 2454872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2460596-2461315:1:exon

position:2460596:1
position: 2460596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2461315:1
position: 2461315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2462423-2462548:1:exon

position:2462423:1
position: 2462423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2462548:1
position: 2462548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2463751-2464697:1:exon

position:2463751:1
position: 2463751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Neurl1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Neurl1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase NEURL1B
translation: MGNTVHRTSPDSSPPARLLATRPCCGPGPEQQQQQQQQRHLVLGEAPRFHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFGFTAHNPSLMSAQDIPKYACPDLVTRPGYWAKALPESLALRDTVLAYWADRHGRVFYRVNDGEPVLFHCGVAVGGPLWALIDVYGITDQVQLLESTFADTLPPARLGQARFSACPPPGSHDAANFDNNELENSQVVAKLGHLALGRAQGPPPADATAAAIPCGPRDRPRPASSPALLDADLRFHTTRGPDVSLSADRKLACAPRPDGGRTLVFCERPLRPGESLLVEVGRAGLAAPGAVAFGITSCDPGALRPAELPADPDALLDRKEYWVVARAGPVPSGGDALSFTLRPGGDVLLGVNGRPRGRLLCVDTSQALWAFFAVRGGAAGQLRLLGTLQSSPATTTRSGSLSGSQDDSDSDMTFSVNQSSSESESSLVTAPSSPLSPLVSPAFSLPEPSASKNGECTVCFDGEVDTVIYTCGHMCLCYSCGLRLKRQARACCPICRRPIKDVIKIYRP
SIO_010081: Neurl1b
subclass of: SO_0000673
so part of: Neurl1b
location: join(2439849..2439879,2454303..2454872,2460596..2461315,2462423..2462548,2463751..2463995)
location: region:2439849-2463995:1
so has part: feature:2439849-2439879:1:exon
so has part: feature:2454303-2454872:1:exon
so has part: feature:2460596-2461315:1:exon
so has part: feature:2462423-2462548:1:exon
so has part: feature:2463751-2463995:1:exon

XP_048190209.1
type: Protein
SIO_000068: ncbiprotein

position:2439849:1
position: 2439849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2463995:1
position: 2463995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2439849-2439879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2454303-2454872:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2460596-2461315:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2462423-2462548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2463751-2463995:1:exon

LOC125342071
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2502713..2522424)
location: region:2502713-2522424:-1
so has part: feature:2502713-2522424:-1:exon
subclass of: SO_0000011

125342071
type: Gene
SIO_000068: ncbigene

position:2502713:-1
position: 2502713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2522424:-1
position: 2522424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2502713-2522424:-1:exon

LOC125342071
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342071
product: uncharacterized LOC125342071
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007209137.1
SIO_010081: LOC125342071
subclass of: SO_0000673
so part of: LOC125342071
location: complement(join(2502713..2503323,2512703..2512704,2522412..2522424))
location: region:2502713-2522424:-1
so has part: feature:2522412-2522424:-1:exon
so has part: feature:2512703-2512704:-1:exon
so has part: feature:2502713-2503323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2522412-2522424:-1:exon

position:2522412:-1
position: 2522412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2512703-2512704:-1:exon

position:2512703:-1
position: 2512703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2512704:-1
position: 2512704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2502713-2503323:-1:exon

position:2503323:-1
position: 2503323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dusp1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Dusp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2502713..2506426)
location: region:2502713-2506426:-1
so has part: feature:2502713-2506426:-1:exon
subclass of: SO_0000010

125342070
type: Gene
SIO_000068: ncbigene

position:2506426:-1
position: 2506426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2502713-2506426:-1:exon

Dusp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Dusp1
product: dual specificity phosphatase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334203.1
SIO_010081: Dusp1
subclass of: SO_0000673
so part of: Dusp1
location: complement(join(2502713..2503763,2504666..2504885,2505483..2505628,2505929..2506426))
location: region:2502713-2506426:-1
so has part: feature:2505929-2506426:-1:exon
so has part: feature:2505483-2505628:-1:exon
so has part: feature:2504666-2504885:-1:exon
so has part: feature:2502713-2503763:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2505929-2506426:-1:exon

position:2505929:-1
position: 2505929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2505483-2505628:-1:exon

position:2505483:-1
position: 2505483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2505628:-1
position: 2505628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2504666-2504885:-1:exon

position:2504666:-1
position: 2504666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2504885:-1
position: 2504885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2502713-2503763:-1:exon

position:2503763:-1
position: 2503763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dusp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Dusp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 1
translation: MVMEVGVLDAAALRALLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGALGLEHIVPNAELRGRLLAGAFRAVVLLDERSAAPDAAKRDGTLALAAGALCREARGTQVLFLQGGYEAFSASCPELCSKQTTPTGLSLPLSSSVPGSAESGCSSCSTPLYDQGGPVEILPFLYLGSAFHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDSHKADISIWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSVISPNFSFMGQLLQFESQVLAPHCSAEAGSPAMAVLDRSTSTTTVFNFPVSIPVHPTNSALSYLQSPITTSPSC
SIO_010081: Dusp1
subclass of: SO_0000673
so part of: Dusp1
location: complement(join(2503393..2503763,2504666..2504885,2505483..2505628,2505929..2506295))
location: region:2503393-2506295:-1
so has part: feature:2505929-2506295:-1:exon
so has part: feature:2505483-2505628:-1:exon
so has part: feature:2504666-2504885:-1:exon
so has part: feature:2503393-2503763:-1:exon

XP_048190160.1
type: Protein
SIO_000068: ncbiprotein

position:2503393:-1
position: 2503393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2506295:-1
position: 2506295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2505929-2506295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2505483-2505628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2504666-2504885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2503393-2503763:-1:exon

LOC125342117
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2523616..2524075
location: region:2523616-2524075:1
so has part: feature:2523616-2524075:1:exon

125342117
type: Gene
SIO_000068: ncbigene

position:2523616:1
position: 2523616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2524075:1
position: 2524075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2523616-2524075:1:exon

LOC125342117
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125342117
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125342117
subclass of: SO_0000673
so part of: LOC125342117
location: 2523616..2524075
location: region:2523616-2524075:1
so has part: feature:2523616-2524075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2523616-2524075:1:exon

Ergic1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ergic1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2535240..2591323
location: region:2535240-2591323:1
so has part: feature:2535240-2591323:1:exon
subclass of: SO_0000010

125341959
type: Gene
SIO_000068: ncbigene

position:2535240:1
position: 2535240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2591323:1
position: 2591323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2535240-2591323:1:exon

Ergic1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ergic1
product: endoplasmic reticulum-golgi intermediate compartment 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334095.1
SIO_010081: Ergic1
subclass of: SO_0000673
so part of: Ergic1
location: join(2535240..2535362,2558774..2558835,2561113..2561185,2567095..2567189,2570721..2570845,2576002..2576106,2576570..2576630,2579493..2579593,2581721..2581843,2590161..2591323)
location: region:2535240-2591323:1
so has part: feature:2535240-2535362:1:exon
so has part: feature:2558774-2558835:1:exon
so has part: feature:2561113-2561185:1:exon
so has part: feature:2567095-2567189:1:exon
so has part: feature:2570721-2570845:1:exon
so has part: feature:2576002-2576106:1:exon
so has part: feature:2576570-2576630:1:exon
so has part: feature:2579493-2579593:1:exon
so has part: feature:2581721-2581843:1:exon
so has part: feature:2590161-2591323:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2535240-2535362:1:exon

position:2535362:1
position: 2535362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2558774-2558835:1:exon

position:2558774:1
position: 2558774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2558835:1
position: 2558835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2561113-2561185:1:exon

position:2561113:1
position: 2561113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2561185:1
position: 2561185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2567095-2567189:1:exon

position:2567095:1
position: 2567095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2567189:1
position: 2567189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2570721-2570845:1:exon

position:2570721:1
position: 2570721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2570845:1
position: 2570845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2576002-2576106:1:exon

position:2576002:1
position: 2576002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2576106:1
position: 2576106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2576570-2576630:1:exon

position:2576570:1
position: 2576570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2576630:1
position: 2576630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2579493-2579593:1:exon

position:2579493:1
position: 2579493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2579593:1
position: 2579593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2581721-2581843:1:exon

position:2581721:1
position: 2581721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581843:1
position: 2581843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2590161-2591323:1:exon

position:2590161:1
position: 2590161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ergic1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ergic1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum-Golgi intermediate compartment protein 1
translation: MPFDLRRFDIYRKVPKDLTQPTYTGAIISVCCCLFILFLFLSELTGFITTEVVNELYVDDPDKDSGGKIDVSLNISLPNLHCELVGLDIQDEMGRHEVGHIDNSMKIPLNNGAGCRFEGQFSINKVPGNFHVSTHSATAQPQNPDMTHAIHKLSFGDTLQVQNVHGAFNALGGADRLSSNPLASHDYILKIVPTVYEDKSGKQLYSYQYTVANKEYVAYSHTGRIIPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCIFTASEAWKKIQLGKMH
SIO_010081: Ergic1
subclass of: SO_0000673
so part of: Ergic1
location: join(2535343..2535362,2558774..2558835,2561113..2561185,2567095..2567189,2570721..2570845,2576002..2576106,2576570..2576630,2579493..2579593,2581721..2581843,2590161..2590268)
location: region:2535343-2590268:1
so has part: feature:2535343-2535362:1:exon
so has part: feature:2558774-2558835:1:exon
so has part: feature:2561113-2561185:1:exon
so has part: feature:2567095-2567189:1:exon
so has part: feature:2570721-2570845:1:exon
so has part: feature:2576002-2576106:1:exon
so has part: feature:2576570-2576630:1:exon
so has part: feature:2579493-2579593:1:exon
so has part: feature:2581721-2581843:1:exon
so has part: feature:2590161-2590268:1:exon

XP_048190052.1
type: Protein
SIO_000068: ncbiprotein

position:2535343:1
position: 2535343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2590268:1
position: 2590268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2535343-2535362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2558774-2558835:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2561113-2561185:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2567095-2567189:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2570721-2570845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2576002-2576106:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2576570-2576630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2579493-2579593:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2581721-2581843:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2590161-2590268:1:exon

Atp6v0e1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Atp6v0e1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2598975..2624441
location: region:2598975-2624441:1
so has part: feature:2598975-2624441:1:exon
subclass of: SO_0000010

125342226
type: Gene
SIO_000068: ncbigene

position:2598975:1
position: 2598975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2624441:1
position: 2624441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2598975-2624441:1:exon

Atp6v0e1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Atp6v0e1
product: ATPase H+ transporting V0 subunit e1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334375.1
SIO_010081: Atp6v0e1
subclass of: SO_0000673
so part of: Atp6v0e1
location: join(2598975..2599151,2605448..2605495,2624022..2624441)
location: region:2598975-2624441:1
so has part: feature:2598975-2599151:1:exon
so has part: feature:2605448-2605495:1:exon
so has part: feature:2624022-2624441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2598975-2599151:1:exon

position:2599151:1
position: 2599151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2605448-2605495:1:exon

position:2605448:1
position: 2605448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2605495:1
position: 2605495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2624022-2624441:1:exon

position:2624022:1
position: 2624022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Atp6v0e1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Atp6v0e1
product: ATPase H+ transporting V0 subunit e1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334377.1
SIO_010081: Atp6v0e1
subclass of: SO_0000673
so part of: Atp6v0e1
location: join(2598978..2599151,2605448..2605495,2617863..2617979,2624022..2624061)
location: region:2598978-2624061:1
so has part: feature:2598978-2599151:1:exon
so has part: feature:2605448-2605495:1:exon
so has part: feature:2617863-2617979:1:exon
so has part: feature:2624022-2624061:1:exon

position:2598978:1
position: 2598978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2624061:1
position: 2624061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2598978-2599151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2605448-2605495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2617863-2617979:1:exon

position:2617863:1
position: 2617863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2617979:1
position: 2617979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2624022-2624061:1:exon

Atp6v0e1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Atp6v0e1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit e 1 isoform X1
translation: MAYHGLTVPLIVMSVFWGFVGLLVPWFIPKGPNRGVIITMLVTCSVCCYLLSQREFLLDEKKKITSKPNMPSCLSLTCLFWIPVALKVPTTLEDLVLQQCSPPPYLLSAERCAFSTAST
SIO_010081: Atp6v0e1
subclass of: SO_0000673
so part of: Atp6v0e1
location: join(2599048..2599151,2605448..2605495,2624022..2624229)
location: region:2599048-2624229:1
so has part: feature:2599048-2599151:1:exon
so has part: feature:2605448-2605495:1:exon
so has part: feature:2624022-2624229:1:exon

XP_048190332.1
type: Protein
SIO_000068: ncbiprotein

position:2599048:1
position: 2599048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2624229:1
position: 2624229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2599048-2599151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2605448-2605495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2624022-2624229:1:exon

Atp6v0e1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Atp6v0e1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit e 1 isoform X2
translation: MAYHGLTVPLIVMSVFWGFVGLLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKHHWP
SIO_010081: Atp6v0e1
subclass of: SO_0000673
so part of: Atp6v0e1
location: join(2599048..2599151,2605448..2605495,2617863..2617956)
location: region:2599048-2617956:1
so has part: feature:2599048-2599151:1:exon
so has part: feature:2605448-2605495:1:exon
so has part: feature:2617863-2617956:1:exon

XP_048190334.1
type: Protein
SIO_000068: ncbiprotein

position:2617956:1
position: 2617956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2599048-2599151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2605448-2605495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2617863-2617956:1:exon

LOC125342225
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2640986..2694222
location: region:2640986-2694222:1
so has part: feature:2640986-2694222:1:exon
subclass of: SO_0000010

125342225
type: Gene
SIO_000068: ncbigene

position:2640986:1
position: 2640986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2694222:1
position: 2694222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2640986-2694222:1:exon

LOC125342225
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342225
product: CREB3 regulatory factor, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334374.1
SIO_010081: LOC125342225
subclass of: SO_0000673
so part of: LOC125342225
location: join(2640986..2641095,2673734..2673919,2676661..2676786,2678509..2679592,2687101..2687295,2687882..2688071,2689462..2689535,2690512..2690634,2693252..2694222)
location: region:2640986-2694222:1
so has part: feature:2640986-2641095:1:exon
so has part: feature:2673734-2673919:1:exon
so has part: feature:2676661-2676786:1:exon
so has part: feature:2678509-2679592:1:exon
so has part: feature:2687101-2687295:1:exon
so has part: feature:2687882-2688071:1:exon
so has part: feature:2689462-2689535:1:exon
so has part: feature:2690512-2690634:1:exon
so has part: feature:2693252-2694222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2640986-2641095:1:exon

position:2641095:1
position: 2641095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2673734-2673919:1:exon

position:2673734:1
position: 2673734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2673919:1
position: 2673919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2676661-2676786:1:exon

position:2676661:1
position: 2676661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2676786:1
position: 2676786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2678509-2679592:1:exon

position:2678509:1
position: 2678509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2679592:1
position: 2679592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2687101-2687295:1:exon

position:2687101:1
position: 2687101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2687295:1
position: 2687295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2687882-2688071:1:exon

position:2687882:1
position: 2687882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2688071:1
position: 2688071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2689462-2689535:1:exon

position:2689462:1
position: 2689462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2689535:1
position: 2689535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2690512-2690634:1:exon

position:2690512:1
position: 2690512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2690634:1
position: 2690634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2693252-2694222:1:exon

position:2693252:1
position: 2693252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342225
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125342225
product: CREB3 regulatory factor, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334373.1
SIO_010081: LOC125342225
subclass of: SO_0000673
so part of: LOC125342225
location: join(2642078..2642231,2673734..2673919,2676661..2676786,2678509..2679592,2687101..2687295,2687882..2688071,2689462..2689535,2690512..2690634,2693252..2694222)
location: region:2642078-2694222:1
so has part: feature:2642078-2642231:1:exon
so has part: feature:2673734-2673919:1:exon
so has part: feature:2676661-2676786:1:exon
so has part: feature:2678509-2679592:1:exon
so has part: feature:2687101-2687295:1:exon
so has part: feature:2687882-2688071:1:exon
so has part: feature:2689462-2689535:1:exon
so has part: feature:2690512-2690634:1:exon
so has part: feature:2693252-2694222:1:exon

position:2642078:1
position: 2642078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2642078-2642231:1:exon

position:2642231:1
position: 2642231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2673734-2673919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2676661-2676786:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2678509-2679592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2687101-2687295:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2687882-2688071:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2689462-2689535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2690512-2690634:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2693252-2694222:1:exon

LOC125342225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB3 regulatory factor
translation: MPQPSVSGMDPPFGDAFRSHTFSEQTLMSTDLLANSSDPDFMYELDREMNYQQNPRDNFLLEDCKDIENLESFTDVLDSEGTLTSNWEQWDTYCEDLTKYTKLTSCDIWGTKEVDYLGLDDFSSPYQDEEVISKTPTLAQLNSEDSQSVSDSLYYPDSLFSVKQNPLPSSFPGKKMTSRAAAPVCSSKTLQTEAPLSDCVQKASKPTSSTQIMVKTNIYHNEKVNFHVECKDYVKKAKVKIHAVQHSRPLLSQSPADAAKENTCYCGVVAKRPERKGVEPLQGHATPTLPFKETQELLLSPLPQEGPGAAATGESSSLSASTLVSDSSQKKEEHNYSLFVSDSLGEQPAKCSPEDDDDEEEDVDDEDHDEGFGSEHELSENEEEEEEEEDYEDDKDDDISDTFSEPGYENDSVEDLKEMTSASSRKRGKRRYFWEYSEQLTPSQQERILRPSEWNRDTLPSNVYQKNGSHHGKYAVKKSRRTDVEDLTPNPKKLLQIGSELRKLNKVISDLTPVSELPLTARPRSRKEKNKLASRACRLKKKAQYEANKVKLWGLNTEYDNLLFVINSIKQEIVNRVQNPREERGPNMGQKLEILIKDTLGLPVAGQTSEFVNQVLEKTAEGNPTGGLVGLRIPASKV
SIO_010081: LOC125342225
subclass of: SO_0000673
so part of: LOC125342225
location: join(2673911..2673919,2676661..2676786,2678509..2679592,2687101..2687295,2687882..2688071,2689462..2689535,2690512..2690634,2693252..2693367)
location: region:2673911-2693367:1
so has part: feature:2673911-2673919:1:exon
so has part: feature:2676661-2676786:1:exon
so has part: feature:2678509-2679592:1:exon
so has part: feature:2687101-2687295:1:exon
so has part: feature:2687882-2688071:1:exon
so has part: feature:2689462-2689535:1:exon
so has part: feature:2690512-2690634:1:exon
so has part: feature:2693252-2693367:1:exon

XP_048190330.1
type: Protein
SIO_000068: ncbiprotein

position:2673911:1
position: 2673911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2693367:1
position: 2693367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2673911-2673919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2676661-2676786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2678509-2679592:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2687101-2687295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2687882-2688071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2689462-2689535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2690512-2690634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2693252-2693367:1:exon

LOC125342225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125342225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB3 regulatory factor
translation: MPQPSVSGMDPPFGDAFRSHTFSEQTLMSTDLLANSSDPDFMYELDREMNYQQNPRDNFLLEDCKDIENLESFTDVLDSEGTLTSNWEQWDTYCEDLTKYTKLTSCDIWGTKEVDYLGLDDFSSPYQDEEVISKTPTLAQLNSEDSQSVSDSLYYPDSLFSVKQNPLPSSFPGKKMTSRAAAPVCSSKTLQTEAPLSDCVQKASKPTSSTQIMVKTNIYHNEKVNFHVECKDYVKKAKVKIHAVQHSRPLLSQSPADAAKENTCYCGVVAKRPERKGVEPLQGHATPTLPFKETQELLLSPLPQEGPGAAATGESSSLSASTLVSDSSQKKEEHNYSLFVSDSLGEQPAKCSPEDDDDEEEDVDDEDHDEGFGSEHELSENEEEEEEEEDYEDDKDDDISDTFSEPGYENDSVEDLKEMTSASSRKRGKRRYFWEYSEQLTPSQQERILRPSEWNRDTLPSNVYQKNGSHHGKYAVKKSRRTDVEDLTPNPKKLLQIGSELRKLNKVISDLTPVSELPLTARPRSRKEKNKLASRACRLKKKAQYEANKVKLWGLNTEYDNLLFVINSIKQEIVNRVQNPREERGPNMGQKLEILIKDTLGLPVAGQTSEFVNQVLEKTAEGNPTGGLVGLRIPASKV
SIO_010081: LOC125342225
subclass of: SO_0000673
so part of: LOC125342225
location: join(2673911..2673919,2676661..2676786,2678509..2679592,2687101..2687295,2687882..2688071,2689462..2689535,2690512..2690634,2693252..2693367)
location: region:2673911-2693367:1
so has part: feature:2673911-2673919:1:exon
so has part: feature:2676661-2676786:1:exon
so has part: feature:2678509-2679592:1:exon
so has part: feature:2687101-2687295:1:exon
so has part: feature:2687882-2688071:1:exon
so has part: feature:2689462-2689535:1:exon
so has part: feature:2690512-2690634:1:exon
so has part: feature:2693252-2693367:1:exon

XP_048190331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2673911-2673919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2676661-2676786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2678509-2679592:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2687101-2687295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2687882-2688071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2689462-2689535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2690512-2690634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2693252-2693367:1:exon

LOC125341895
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2704055..2740427
location: region:2704055-2740427:1
so has part: feature:2704055-2740427:1:exon
subclass of: SO_0000010

125341895
type: Gene
SIO_000068: ncbigene

position:2704055:1
position: 2704055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2740427:1
position: 2740427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2704055-2740427:1:exon

LOC125341895
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125341895
product: vesicle transport protein SEC20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334025.1
SIO_010081: LOC125341895
subclass of: SO_0000673
so part of: LOC125341895
location: join(2704055..2704207,2706375..2706467,2708841..2708932,2710876..2710977,2714207..2714325,2716359..2716556,2739493..2739502,2740415..2740427)
location: region:2704055-2740427:1
so has part: feature:2704055-2704207:1:exon
so has part: feature:2706375-2706467:1:exon
so has part: feature:2708841-2708932:1:exon
so has part: feature:2710876-2710977:1:exon
so has part: feature:2714207-2714325:1:exon
so has part: feature:2716359-2716556:1:exon
so has part: feature:2739493-2739502:1:exon
so has part: feature:2740415-2740427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2704055-2704207:1:exon

position:2704207:1
position: 2704207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2706375-2706467:1:exon

position:2706375:1
position: 2706375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2706467:1
position: 2706467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2708841-2708932:1:exon

position:2708841:1
position: 2708841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2708932:1
position: 2708932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2710876-2710977:1:exon

position:2710876:1
position: 2710876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2710977:1
position: 2710977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2714207-2714325:1:exon

position:2714207:1
position: 2714207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2714325:1
position: 2714325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2716359-2716556:1:exon

position:2716359:1
position: 2716359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2716556:1
position: 2716556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2739493-2739502:1:exon

position:2739493:1
position: 2739493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2739502:1
position: 2739502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2740415-2740427:1:exon

position:2740415:1
position: 2740415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125341895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125341895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle transport protein SEC20
translation: MAAPLDVHVRICNQEIVRFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQELEQSAKEQDKESEKHMLLQEVENHKKQMLSNQTSWRKANLTCKIAIDNLEKAELLQGGDLLRQRKTTKESLAQTSSTITESLMGISRMMSQQVQQSEEAVHTLVNSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL
SIO_010081: LOC125341895
subclass of: SO_0000673
so part of: LOC125341895
location: join(2704124..2704207,2706375..2706467,2708841..2708932,2710876..2710977,2714207..2714325,2716359..2716555)
location: region:2704124-2716555:1
so has part: feature:2704124-2704207:1:exon
so has part: feature:2706375-2706467:1:exon
so has part: feature:2708841-2708932:1:exon
so has part: feature:2710876-2710977:1:exon
so has part: feature:2714207-2714325:1:exon
so has part: feature:2716359-2716555:1:exon

XP_048189982.1
type: Protein
SIO_000068: ncbiprotein

position:2704124:1
position: 2704124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2716555:1
position: 2716555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2704124-2704207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2706375-2706467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2708841-2708932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2710876-2710977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2714207-2714325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2716359-2716555:1:exon

LOC125341896
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2710898..2727963)
location: region:2710898-2727963:-1
so has part: feature:2710898-2727963:-1:exon
subclass of: SO_0000011

125341896
type: Gene
SIO_000068: ncbigene

position:2710898:-1
position: 2710898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2727963:-1
position: 2727963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2710898-2727963:-1:exon

LOC125341896
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125341896
product: uncharacterized LOC125341896
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007209102.1
SIO_010081: LOC125341896
subclass of: SO_0000673
so part of: LOC125341896
location: complement(join(2710898..2711025,2724613..2724616,2727952..2727963))
location: region:2710898-2727963:-1
so has part: feature:2727952-2727963:-1:exon
so has part: feature:2724613-2724616:-1:exon
so has part: feature:2710898-2711025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2727952-2727963:-1:exon

position:2727952:-1
position: 2727952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2724613-2724616:-1:exon

position:2724613:-1
position: 2724613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2724616:-1
position: 2724616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2710898-2711025:-1:exon

position:2711025:-1
position: 2711025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125341768
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2735271..2739607)
location: region:2735271-2739607:-1
so has part: feature:2735271-2739607:-1:exon
subclass of: SO_0000010

125341768
type: Gene
SIO_000068: ncbigene

position:2735271:-1
position: 2735271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2739607:-1
position: 2739607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2735271-2739607:-1:exon

LOC125341768
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125341768
product: homeobox protein Nkx-2.5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048333863.1
SIO_010081: LOC125341768
subclass of: SO_0000673
so part of: LOC125341768
location: complement(join(2735271..2735899,2739250..2739607))
location: region:2735271-2739607:-1
so has part: feature:2739250-2739607:-1:exon
so has part: feature:2735271-2735899:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2739250-2739607:-1:exon

position:2739250:-1
position: 2739250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2735271-2735899:-1:exon

position:2735899:-1
position: 2735899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125341768
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125341768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-2.5-like
translation: MFPSSTLTPTPFSVKDILNLEIQQQQQQRSLAAREPPVRPEAALAPSSCMLAAFKPEACAGPGAPAPGLLPELRAAAAALGPAPSPPPKCAPAFPDAPTFYPRAYGDPEPAKDPRADKKEPEPERARARRRRRPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLELVGLPPPPPPPPPPPPPAARRIAVPVLVRDGKPCLADSAPYAPAYGVGLNAYGYNAYPAYPAYGAAAAPACAPAYGCAAAYPAAPAAQPGANAAANGFVNLGGIGDLNAAVPSPGMAQGSPGVSSLHGIRAW
SIO_010081: LOC125341768
subclass of: SO_0000673
so part of: LOC125341768
location: complement(join(2735271..2735899,2739250..2739607))
location: region:2735271-2739607:-1
so has part: feature:2739250-2739607:-1:exon
so has part: feature:2735271-2735899:-1:exon

XP_048189820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2739250-2739607:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2735271-2735899:-1:exon

Crebrf
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Crebrf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2780181..2803464
location: region:2780181-2803464:1
so has part: feature:2780181-2803464:1:exon
subclass of: SO_0000010

125341878
type: Gene
SIO_000068: ncbigene

position:2780181:1
position: 2780181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2803464:1
position: 2803464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2780181-2803464:1:exon

Crebrf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Crebrf
product: CREB3 regulatory factor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048333997.1
SIO_010081: Crebrf
subclass of: SO_0000673
so part of: Crebrf
location: join(2780181..2780362,2783103..2783228,2784954..2786037,2793920..2794114,2794701..2794890,2796283..2796356,2797333..2797455,2800055..2803464)
location: region:2780181-2803464:1
so has part: feature:2780181-2780362:1:exon
so has part: feature:2783103-2783228:1:exon
so has part: feature:2784954-2786037:1:exon
so has part: feature:2793920-2794114:1:exon
so has part: feature:2794701-2794890:1:exon
so has part: feature:2796283-2796356:1:exon
so has part: feature:2797333-2797455:1:exon
so has part: feature:2800055-2803464:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2780181-2780362:1:exon

position:2780362:1
position: 2780362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2783103-2783228:1:exon

position:2783103:1
position: 2783103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2783228:1
position: 2783228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2784954-2786037:1:exon

position:2784954:1
position: 2784954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2786037:1
position: 2786037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2793920-2794114:1:exon

position:2793920:1
position: 2793920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2794114:1
position: 2794114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2794701-2794890:1:exon

position:2794701:1
position: 2794701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2794890:1
position: 2794890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2796283-2796356:1:exon

position:2796283:1
position: 2796283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2796356:1
position: 2796356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2797333-2797455:1:exon

position:2797333:1
position: 2797333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2797455:1
position: 2797455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2800055-2803464:1:exon

position:2800055:1
position: 2800055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Crebrf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Crebrf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB3 regulatory factor
translation: MPQPSVSGMDPPFGDAFRSHTFSEQTLMSTDLLANSSDPDFMYELDREMNYQQNPRDNFLLEDCKDIENLESFTDVLDSEGTLTSNWEQWDTYCEDLTKYTKLTSCDIWGTKEVDYLGLDDFSSPYQDEEVISKTPTLAQLNSEDSQSVSDSLYYPDSLFSVKQNPLPSSFPGKKMTSRAAAPVCSSKTLQTEAPLSDCVQKASKPTSSTQIMVKTNIYHNEKVNFHVECKDYVKKAKVKIHAVQHSRPLLSQSPADAAKENTCYCGVVAKRPERKGVEPLQGHATPTLPFKETQELLLSPLPQEGPGAAATGESSSLSASTLVSDSSQKKEEHNYSLFVSDSLGEQPAKCSPEDDDDEEEDVDDEDHDEGFGSEHELSENEEEEEEEEDYEDDKDDDISDTFSEPGYENDSVEDLKEMTSASSRKRGKRRYFWEYSEQLTPSQQERILRPSEWNRDTLPSNVYQKNGSHHGKYAVKKSRRTDVEDLTPNPKKLLQIGSELRKLNKVISDLTPVSELPLTARPRSRKEKNKLASRACRLKKKAQYEANKVKLWGLNTEYDNLLFVINSIKQEIVNRVQNPREERGPNMGQKLEILIKDTLGLPVAGQTSEFVNQVLEKTAEGNPTGGLVGLRIPASKV
SIO_010081: Crebrf
subclass of: SO_0000673
so part of: Crebrf
location: join(2780354..2780362,2783103..2783228,2784954..2786037,2793920..2794114,2794701..2794890,2796283..2796356,2797333..2797455,2800055..2800170)
location: region:2780354-2800170:1
so has part: feature:2780354-2780362:1:exon
so has part: feature:2783103-2783228:1:exon
so has part: feature:2784954-2786037:1:exon
so has part: feature:2793920-2794114:1:exon
so has part: feature:2794701-2794890:1:exon
so has part: feature:2796283-2796356:1:exon
so has part: feature:2797333-2797455:1:exon
so has part: feature:2800055-2800170:1:exon

XP_048189954.1
type: Protein
SIO_000068: ncbiprotein

position:2780354:1
position: 2780354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2800170:1
position: 2800170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2780354-2780362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2783103-2783228:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2784954-2786037:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2793920-2794114:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2794701-2794890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2796283-2796356:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2797333-2797455:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2800055-2800170:1:exon

LOC125341880
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2801837..2815713)
location: region:2801837-2815713:-1
so has part: feature:2801837-2815713:-1:exon
subclass of: SO_0000011

125341880
type: Gene
SIO_000068: ncbigene

position:2801837:-1
position: 2801837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2815713:-1
position: 2815713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2801837-2815713:-1:exon

LOC125341880
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125341880
product: uncharacterized LOC125341880
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_007209100.1
SIO_010081: LOC125341880
subclass of: SO_0000673
so part of: LOC125341880
location: complement(join(2801837..2801967,2810182..2810213,2815699..2815713))
location: region:2801837-2815713:-1
so has part: feature:2815699-2815713:-1:exon
so has part: feature:2810182-2810213:-1:exon
so has part: feature:2801837-2801967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2815699-2815713:-1:exon

position:2815699:-1
position: 2815699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2810182-2810213:-1:exon

position:2810182:-1
position: 2810182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2810213:-1
position: 2810213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2801837-2801967:-1:exon

position:2801967:-1
position: 2801967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Bnip1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Bnip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2810628..2823160
location: region:2810628-2823160:1
so has part: feature:2810628-2823160:1:exon
subclass of: SO_0000010

125341879
type: Gene
SIO_000068: ncbigene

position:2810628:1
position: 2810628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2823160:1
position: 2823160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2810628-2823160:1:exon

Bnip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Bnip1
product: BCL2 interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048333998.1
SIO_010081: Bnip1
subclass of: SO_0000673
so part of: Bnip1
location: join(2810628..2810784,2812952..2813044,2815424..2815515,2817460..2817561,2820748..2820866,2822776..2823160)
location: region:2810628-2823160:1
so has part: feature:2810628-2810784:1:exon
so has part: feature:2812952-2813044:1:exon
so has part: feature:2815424-2815515:1:exon
so has part: feature:2817460-2817561:1:exon
so has part: feature:2820748-2820866:1:exon
so has part: feature:2822776-2823160:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2810628-2810784:1:exon

position:2810784:1
position: 2810784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2812952-2813044:1:exon

position:2812952:1
position: 2812952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2813044:1
position: 2813044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2815424-2815515:1:exon

position:2815424:1
position: 2815424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2815515:1
position: 2815515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2817460-2817561:1:exon

position:2817460:1
position: 2817460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2817561:1
position: 2817561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2820748-2820866:1:exon

position:2820748:1
position: 2820748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2820866:1
position: 2820866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2822776-2823160:1:exon

position:2822776:1
position: 2822776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Bnip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Bnip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle transport protein SEC20
translation: MAAPLDVHVRICNQEIVRFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQELEQSAKEQDKESEKHMLLQEVENHKKQMLSNQTSWRKANLTCKIAIDNLEKAELLQGGDLLRQRKTTKESLAQTSSTITESLMGISRMMSQQVQQSEEAVHTLVNSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL
SIO_010081: Bnip1
subclass of: SO_0000673
so part of: Bnip1
location: join(2810701..2810784,2812952..2813044,2815424..2815515,2817460..2817561,2820748..2820866,2822776..2822972)
location: region:2810701-2822972:1
so has part: feature:2810701-2810784:1:exon
so has part: feature:2812952-2813044:1:exon
so has part: feature:2815424-2815515:1:exon
so has part: feature:2817460-2817561:1:exon
so has part: feature:2820748-2820866:1:exon
so has part: feature:2822776-2822972:1:exon

XP_048189955.1
type: Protein
SIO_000068: ncbiprotein

position:2810701:1
position: 2810701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2822972:1
position: 2822972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2810701-2810784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2812952-2813044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2815424-2815515:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2817460-2817561:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2820748-2820866:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2822776-2822972:1:exon

LOC125341770
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2841445..2845810)
location: region:2841445-2845810:-1
so has part: feature:2841445-2845810:-1:exon
subclass of: SO_0000010

125341770
type: Gene
SIO_000068: ncbigene

position:2841445:-1
position: 2841445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2845810:-1
position: 2845810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2841445-2845810:-1:exon

LOC125341770
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125341770
product: homeobox protein Nkx-2.5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048333864.1
SIO_010081: LOC125341770
subclass of: SO_0000673
so part of: LOC125341770
location: complement(join(2841445..2842073,2845453..2845810))
location: region:2841445-2845810:-1
so has part: feature:2845453-2845810:-1:exon
so has part: feature:2841445-2842073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2845453-2845810:-1:exon

position:2845453:-1
position: 2845453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2841445-2842073:-1:exon

position:2842073:-1
position: 2842073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125341770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125341770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-2.5-like
translation: MFPSSTLTPTPFSVKDILNLEIQQQQQQRSLAAREPPVRPEAALAPSSCMLAAFKPEACAGPGAPAPGLLPELRAAAAALGPAPSPPPKCAPAFPDAPTFYPRAYGDPEPAKDPRADKKEPEPERARARRRRRPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLELVGLPPPPPPPPPPPPPAARRIAVPVLVRDGKPCLADSAPYAPAYGVGLNAYGYNAYPAYPAYGAAAAPACAPAYGCAAAYPAAPAAQPGANAAANGFVNLGGIGDLNAAVPSPGMAQGSPGVSSLHGIRAW
SIO_010081: LOC125341770
subclass of: SO_0000673
so part of: LOC125341770
location: complement(join(2841445..2842073,2845453..2845810))
location: region:2841445-2845810:-1
so has part: feature:2845453-2845810:-1:exon
so has part: feature:2841445-2842073:-1:exon

XP_048189821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2845453-2845810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2841445-2842073:-1:exon

Stc2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Stc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2874105..2881856)
location: region:2874105-2881856:-1
so has part: feature:2874105-2881856:-1:exon
subclass of: SO_0000010

125341916
type: Gene
SIO_000068: ncbigene

position:2874105:-1
position: 2874105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2881856:-1
position: 2881856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2874105-2881856:-1:exon

Stc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Stc2
product: stanniocalcin 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048334045.1
SIO_010081: Stc2
subclass of: SO_0000673
so part of: Stc2
location: complement(join(2874105..2874526,2877314..2877525,2879198..2879340,2881624..2881856))
location: region:2874105-2881856:-1
so has part: feature:2881624-2881856:-1:exon
so has part: feature:2879198-2879340:-1:exon
so has part: feature:2877314-2877525:-1:exon
so has part: feature:2874105-2874526:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2881624-2881856:-1:exon

position:2881624:-1
position: 2881624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2879198-2879340:-1:exon

position:2879198:-1
position: 2879198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2879340:-1
position: 2879340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2877314-2877525:-1:exon

position:2877314:-1
position: 2877314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2877525:-1
position: 2877525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2874105-2874526:-1:exon

position:2874526:-1
position: 2874526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Stc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Stc2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: stanniocalcin-2
translation: MRAARLGPWATLALLLATLDPARGTGATSAPEGPSDRGAPQKGRLSLQNTADIQRCLVNAGDVGCSVFECFENNSCEIRGLQGICMTFLHNAGKFDAQGKSFIKDALKCKAHALRHRFGCISRKCPAIKEMVFQLQRECYLKHDLCAAAQDNIGVMVEMIHFKDLLLQEPYVDLVNLLLTCGEQVREAVTHSVQAQCEQDWGGLCSILSFCTSTIQQPPTVPPAGQPLGAGNLAGXVGEPGSSGERARGGRGGRENKSHPHAHARARAGGYGSQSGEGEERPSEYADVRR
SIO_010081: Stc2
subclass of: SO_0000673
so part of: Stc2
location: complement(join(2874161..2874526,2877314..2877525,2879198..2879340,2881624..2881774))
location: region:2874161-2881774:-1
so has part: feature:2881624-2881774:-1:exon
so has part: feature:2879198-2879340:-1:exon
so has part: feature:2877314-2877525:-1:exon
so has part: feature:2874161-2874526:-1:exon

XP_048190002.1
type: Protein
SIO_000068: ncbiprotein

position:2874161:-1
position: 2874161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2881774:-1
position: 2881774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881624-2881774:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2879198-2879340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2877314-2877525:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2874161-2874526:-1:exon

Bod1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Bod1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2953098..2974599)
location: region:2953098-2974599:-1
so has part: feature:2953098-2974599:-1:exon
subclass of: SO_0000010

125342092
type: Gene
SIO_000068: ncbigene

position:2953098:-1
position: 2953098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2974599:-1
position: 2974599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2953098-2974599:-1:exon

Bod1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Bod1
product: biorientation of chromosomes in cell division 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048334226.1
SIO_010081: Bod1
subclass of: SO_0000673
so part of: Bod1
location: complement(join(2953098..2953107,2965836..2965838,2969134..2969330,2971265..2971389,2974259..2974599))
location: region:2953098-2974599:-1
so has part: feature:2974259-2974599:-1:exon
so has part: feature:2971265-2971389:-1:exon
so has part: feature:2969134-2969330:-1:exon
so has part: feature:2965836-2965838:-1:exon
so has part: feature:2953098-2953107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2974259-2974599:-1:exon

position:2974259:-1
position: 2974259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2971265-2971389:-1:exon

position:2971265:-1
position: 2971265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2971389:-1
position: 2971389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2969134-2969330:-1:exon

position:2969134:-1
position: 2969134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2969330:-1
position: 2969330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2965836-2965838:-1:exon

position:2965836:-1
position: 2965836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2965838:-1
position: 2965838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2953098-2953107:-1:exon

position:2953107:-1
position: 2953107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Bod1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Bod1
product: biorientation of chromosomes in cell division 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334225.1
SIO_010081: Bod1
subclass of: SO_0000673
so part of: Bod1
location: complement(join(2968294..2968754,2969134..2969330,2971265..2971389,2974259..2974599))
location: region:2968294-2974599:-1
so has part: feature:2974259-2974599:-1:exon
so has part: feature:2971265-2971389:-1:exon
so has part: feature:2969134-2969330:-1:exon
so has part: feature:2968294-2968754:-1:exon

position:2968294:-1
position: 2968294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2974259-2974599:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2971265-2971389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2969134-2969330:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2968294-2968754:-1:exon

position:2968754:-1
position: 2968754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Bod1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Bod1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: biorientation of chromosomes in cell division protein 1
translation: MADGGGGGGAPGSVGGGGVGPASAGNAAGAKGPGAGGGAPNPASLPPGDPQLIALIVEQLKSRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVVQSGMLEAGVDRIISQVVDPKLNHIFRPQIERAIHEFLAAQRKEAVPAPPPEPESQDPPAPAQDAS
SIO_010081: Bod1
subclass of: SO_0000673
so part of: Bod1
location: complement(join(2969135..2969330,2971265..2971389,2974259..2974498))
location: region:2969135-2974498:-1
so has part: feature:2974259-2974498:-1:exon
so has part: feature:2971265-2971389:-1:exon
so has part: feature:2969135-2969330:-1:exon

XP_048190182.1
type: Protein
SIO_000068: ncbiprotein

position:2969135:-1
position: 2969135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2974498:-1
position: 2974498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2974259-2974498:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2971265-2971389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2969135-2969330:-1:exon

Bod1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Bod1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: biorientation of chromosomes in cell division protein 1
translation: MADGGGGGGAPGSVGGGGVGPASAGNAAGAKGPGAGGGAPNPASLPPGDPQLIALIVEQLKSRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVVQSGMLEAGVDRIISQVVDPKLNHIFRPQIERAIHEFLAAQRKEAVPAPPPEPESQDPPAPAQDAS
SIO_010081: Bod1
subclass of: SO_0000673
so part of: Bod1
location: complement(join(2969135..2969330,2971265..2971389,2974259..2974498))
location: region:2969135-2974498:-1
so has part: feature:2974259-2974498:-1:exon
so has part: feature:2971265-2971389:-1:exon
so has part: feature:2969135-2969330:-1:exon

XP_048190183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2974259-2974498:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2971265-2971389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2969135-2969330:-1:exon

Cpeb4
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Cpeb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3074420..3153092
location: region:3074420-3153092:1
so has part: feature:3074420-3153092:1:exon
subclass of: SO_0000010

125342091
type: Gene
SIO_000068: ncbigene

position:3074420:1
position: 3074420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3153092:1
position: 3153092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3074420-3153092:1:exon

Cpeb4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cpeb4
product: cytoplasmic polyadenylation element binding protein 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334224.1
SIO_010081: Cpeb4
subclass of: SO_0000673
so part of: Cpeb4
location: join(3074420..3076456,3095988..3096069,3136044..3136217,3140154..3140243,3140887..3141005,3142923..3143037,3145151..3145332,3148463..3153092)
location: region:3074420-3153092:1
so has part: feature:3074420-3076456:1:exon
so has part: feature:3095988-3096069:1:exon
so has part: feature:3136044-3136217:1:exon
so has part: feature:3140154-3140243:1:exon
so has part: feature:3140887-3141005:1:exon
so has part: feature:3142923-3143037:1:exon
so has part: feature:3145151-3145332:1:exon
so has part: feature:3148463-3153092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3074420-3076456:1:exon

position:3076456:1
position: 3076456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3095988-3096069:1:exon

position:3095988:1
position: 3095988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3096069:1
position: 3096069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3136044-3136217:1:exon

position:3136044:1
position: 3136044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3136217:1
position: 3136217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3140154-3140243:1:exon

position:3140154:1
position: 3140154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3140243:1
position: 3140243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3140887-3141005:1:exon

position:3140887:1
position: 3140887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141005:1
position: 3141005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3142923-3143037:1:exon

position:3142923:1
position: 3142923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3143037:1
position: 3143037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3145151-3145332:1:exon

position:3145151:1
position: 3145151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3145332:1
position: 3145332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3148463-3153092:1:exon

position:3148463:1
position: 3148463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cpeb4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cpeb4
product: cytoplasmic polyadenylation element binding protein 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334223.1
SIO_010081: Cpeb4
subclass of: SO_0000673
so part of: Cpeb4
location: join(3074422..3076456,3095988..3096069,3124598..3124648,3136044..3136217,3140154..3140243,3140887..3141005,3142923..3143037,3145151..3145332,3148463..3153092)
location: region:3074422-3153092:1
so has part: feature:3074422-3076456:1:exon
so has part: feature:3095988-3096069:1:exon
so has part: feature:3124598-3124648:1:exon
so has part: feature:3136044-3136217:1:exon
so has part: feature:3140154-3140243:1:exon
so has part: feature:3140887-3141005:1:exon
so has part: feature:3142923-3143037:1:exon
so has part: feature:3145151-3145332:1:exon
so has part: feature:3148463-3153092:1:exon

position:3074422:1
position: 3074422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3074422-3076456:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3095988-3096069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3124598-3124648:1:exon

position:3124598:1
position: 3124598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3124648:1
position: 3124648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3136044-3136217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3140154-3140243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3140887-3141005:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3142923-3143037:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3145151-3145332:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3148463-3153092:1:exon

Cpeb4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cpeb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 4 isoform X1
translation: MGDYGFGVLVQSNTGNKSAFPVRFHPHLQPPHHHQNATPSPAAFINNNTAANGSSAGSAWLFPAPATHNIQDEILGSEKAKSQPQDQPDPLEKQPLSSSPGQEVLPDTEKVKTEESQGDNSSENGNGKEKIRIESPVLTGFDYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAPSSSTIINEDASFFHQGGVPAPSANNGALLFQNFPHHVSPGFGASFSPQIGALSQHHPHHPHFPHHHSQHQQQRRSPASPHPPPFPHRNAAFNQLPHLANNLNKPPSPWSSYQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQLQKYARPSSAFAPKSWMEDSLNRADNIFPFPDRPRTFDMHSLESSLIDIMRAENDSIKGRVNYSYPGSDSSLLINGQSSLFPMEDGFLDDGRGDQPLHGGLGSPRCFPHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
SIO_010081: Cpeb4
subclass of: SO_0000673
so part of: Cpeb4
location: join(3075338..3076456,3095988..3096069,3124598..3124648,3136044..3136217,3140154..3140243,3140887..3141005,3142923..3143037,3145151..3145332,3148463..3148690)
location: region:3075338-3148690:1
so has part: feature:3075338-3076456:1:exon
so has part: feature:3095988-3096069:1:exon
so has part: feature:3124598-3124648:1:exon
so has part: feature:3136044-3136217:1:exon
so has part: feature:3140154-3140243:1:exon
so has part: feature:3140887-3141005:1:exon
so has part: feature:3142923-3143037:1:exon
so has part: feature:3145151-3145332:1:exon
so has part: feature:3148463-3148690:1:exon

XP_048190180.1
type: Protein
SIO_000068: ncbiprotein

position:3075338:1
position: 3075338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3148690:1
position: 3148690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3075338-3076456:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3095988-3096069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3124598-3124648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136044-3136217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3140154-3140243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3140887-3141005:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3142923-3143037:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3145151-3145332:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3148463-3148690:1:exon

Cpeb4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cpeb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 4 isoform X2
translation: MGDYGFGVLVQSNTGNKSAFPVRFHPHLQPPHHHQNATPSPAAFINNNTAANGSSAGSAWLFPAPATHNIQDEILGSEKAKSQPQDQPDPLEKQPLSSSPGQEVLPDTEKVKTEESQGDNSSENGNGKEKIRIESPVLTGFDYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAPSSSTIINEDASFFHQGGVPAPSANNGALLFQNFPHHVSPGFGASFSPQIGALSQHHPHHPHFPHHHSQHQQQRRSPASPHPPPFPHRNAAFNQLPHLANNLNKPPSPWSSYQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQLQKYARPSSAFAPKSWMEDSLNRADNIFPFPDRPRTFDMHSLESSLIDIMRAENDSIKGQSSLFPMEDGFLDDGRGDQPLHGGLGSPRCFPHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
SIO_010081: Cpeb4
subclass of: SO_0000673
so part of: Cpeb4
location: join(3075338..3076456,3095988..3096069,3136044..3136217,3140154..3140243,3140887..3141005,3142923..3143037,3145151..3145332,3148463..3148690)
location: region:3075338-3148690:1
so has part: feature:3075338-3076456:1:exon
so has part: feature:3095988-3096069:1:exon
so has part: feature:3136044-3136217:1:exon
so has part: feature:3140154-3140243:1:exon
so has part: feature:3140887-3141005:1:exon
so has part: feature:3142923-3143037:1:exon
so has part: feature:3145151-3145332:1:exon
so has part: feature:3148463-3148690:1:exon

XP_048190181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3075338-3076456:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3095988-3096069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3136044-3136217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3140154-3140243:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3140887-3141005:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3142923-3143037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3145151-3145332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3148463-3148690:1:exon

Nsg2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Nsg2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3195175..3222393
location: region:3195175-3222393:1
so has part: feature:3195175-3222393:1:exon
subclass of: SO_0000010

125342072
type: Gene
SIO_000068: ncbigene

position:3195175:1
position: 3195175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3222393:1
position: 3222393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3195175-3222393:1:exon

Nsg2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Nsg2
product: neuronal vesicle trafficking associated 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048334204.1
SIO_010081: Nsg2
subclass of: SO_0000673
so part of: Nsg2
location: join(3195175..3195303,3207677..3207760,3220473..3220583,3222202..3222393)
location: region:3195175-3222393:1
so has part: feature:3195175-3195303:1:exon
so has part: feature:3207677-3207760:1:exon
so has part: feature:3220473-3220583:1:exon
so has part: feature:3222202-3222393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3195175-3195303:1:exon

position:3195303:1
position: 3195303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3207677-3207760:1:exon

position:3207677:1
position: 3207677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3207760:1
position: 3207760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3220473-3220583:1:exon

position:3220473:1
position: 3220473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3220583:1
position: 3220583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3222202-3222393:1:exon

position:3222202:1
position: 3222202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nsg2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Nsg2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal vesicle trafficking-associated protein 2
translation: MVKLNGTPSEKGLKPPSVEDGFQTVPLITPLEVDHLQLPAPEKVIVKTRTEYQPEQKNKGKFRVPKIAEFTVTILVSLALAFLACIVFLVVYKAFTYDHSCPEGFVYKHKRCIPASLDAYYSSQDPSSRSRFYTVISHYSAARQSTARAIGPWLSAAAVIHEPKPPKTQGH
SIO_010081: Nsg2
subclass of: SO_0000673
so part of: Nsg2
location: join(3195175..3195303,3207677..3207760,3220473..3220583,3222202..3222393)
location: region:3195175-3222393:1
so has part: feature:3195175-3195303:1:exon
so has part: feature:3207677-3207760:1:exon
so has part: feature:3220473-3220583:1:exon
so has part: feature:3222202-3222393:1:exon

XP_048190161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3195175-3195303:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3207677-3207760:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3220473-3220583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3222202-3222393:1:exon

Drd1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Drd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3590112..3591543)
location: region:3590112-3591543:-1
so has part: feature:3590112-3591543:-1:exon
subclass of: SO_0000010

125342066
type: Gene
SIO_000068: ncbigene

position:3590112:-1
position: 3590112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3591543:-1
position: 3591543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3590112-3591543:-1:exon

Drd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Drd1
product: dopamine receptor D1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334196.1
SIO_010081: Drd1
subclass of: SO_0000673
so part of: Drd1
location: complement(3590112..3591543)
location: region:3590112-3591543:-1
so has part: feature:3590112-3591543:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3590112-3591543:-1:exon

Drd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Drd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D(1A) dopamine receptor
translation: MSLNNSSMDEAGLVVERDFSFRILTACFLSVLILSTLLGNTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPWKAVAEIAGFWPFGSFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFQYERKMTPKVAFILISVAWMLSVLISFIPVQLSWHKAKPANPLEGNATFLEEATDNCDTRLSRTYAISSSLISFYIPVVIMIVTYTSIYRIAQKQIRRISALEKAAVHAKHCQSATGNGNLVECSQSESSFKTSFKRETKVLKTLSVIMGVFVCCWLPFFISNCMVPFCEPGETQSFCIDSITFDVFVWFGWANSSLNPIIYAFNADFQKAFSTLLGCYRLCPATNNAIETVSINNNGATVFSSHHEPRGSISKESNLVYLIPHSVGSEDPRKDEATGAAKPLEKLSPALSVILDCDTDVSLEKVQPITHTGQHPT
SIO_010081: Drd1
subclass of: SO_0000673
so part of: Drd1
location: complement(3590209..3591543)
location: region:3590209-3591543:-1
so has part: feature:3590209-3591543:-1:exon

XP_048190153.1
type: Protein
SIO_000068: ncbiprotein

position:3590209:-1
position: 3590209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3590209-3591543:-1:exon

Sfxn1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Sfxn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3603525..3629000
location: region:3603525-3629000:1
so has part: feature:3603525-3629000:1:exon
subclass of: SO_0000010

125342060
type: Gene
SIO_000068: ncbigene

position:3603525:1
position: 3603525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3629000:1
position: 3629000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3603525-3629000:1:exon

Sfxn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sfxn1
product: sideroflexin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334193.1
SIO_010081: Sfxn1
subclass of: SO_0000673
so part of: Sfxn1
location: join(3603525..3603600,3610720..3610892,3612445..3612615,3612914..3613012,3615148..3615223,3616518..3616603,3617930..3618057,3619614..3619663,3626075..3626124,3626835..3626882,3628558..3628678,3628893..3629000)
location: region:3603525-3629000:1
so has part: feature:3603525-3603600:1:exon
so has part: feature:3610720-3610892:1:exon
so has part: feature:3612445-3612615:1:exon
so has part: feature:3612914-3613012:1:exon
so has part: feature:3615148-3615223:1:exon
so has part: feature:3616518-3616603:1:exon
so has part: feature:3617930-3618057:1:exon
so has part: feature:3619614-3619663:1:exon
so has part: feature:3626075-3626124:1:exon
so has part: feature:3626835-3626882:1:exon
so has part: feature:3628558-3628678:1:exon
so has part: feature:3628893-3629000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3603525-3603600:1:exon

position:3603600:1
position: 3603600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3610720-3610892:1:exon

position:3610720:1
position: 3610720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3610892:1
position: 3610892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3612445-3612615:1:exon

position:3612445:1
position: 3612445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3612615:1
position: 3612615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3612914-3613012:1:exon

position:3612914:1
position: 3612914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3613012:1
position: 3613012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3615148-3615223:1:exon

position:3615148:1
position: 3615148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3615223:1
position: 3615223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3616518-3616603:1:exon

position:3616518:1
position: 3616518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3616603:1
position: 3616603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3617930-3618057:1:exon

position:3617930:1
position: 3617930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3618057:1
position: 3618057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3619614-3619663:1:exon

position:3619614:1
position: 3619614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3619663:1
position: 3619663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3626075-3626124:1:exon

position:3626075:1
position: 3626075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3626124:1
position: 3626124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3626835-3626882:1:exon

position:3626835:1
position: 3626835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3626882:1
position: 3626882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3628558-3628678:1:exon

position:3628558:1
position: 3628558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3628678:1
position: 3628678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3628893-3629000:1:exon

position:3628893:1
position: 3628893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sfxn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sfxn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sideroflexin-1
translation: MSGEVPANINIKEPRWDQSTFAGRANHFFTVTDPRNILLTEDQLESARKIVHDYRQGVIPPGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTTPAVLFWQWVNQSFNAVVNYTNRSGDAPLSVSELGTAYVSATSGAVVTALGLNALTKHVSSLVGRFVPFAAVAAANCINIPLMRQRELKVGIPVTDEHGNRLGESANAAQQAIAQVVISRILMAAPGMAIPPFIMNTLEKKAFLKRFPWMSAPIQVGLVGFCLVFATPLCCALFPQKSSMSVSSLEDELRAKLQESHPELRRVYFNKGL
SIO_010081: Sfxn1
subclass of: SO_0000673
so part of: Sfxn1
location: join(3610729..3610892,3612445..3612615,3612914..3613012,3615148..3615223,3616518..3616603,3617930..3618057,3619614..3619663,3626075..3626124,3626835..3626882,3628558..3628654)
location: region:3610729-3628654:1
so has part: feature:3610729-3610892:1:exon
so has part: feature:3612445-3612615:1:exon
so has part: feature:3612914-3613012:1:exon
so has part: feature:3615148-3615223:1:exon
so has part: feature:3616518-3616603:1:exon
so has part: feature:3617930-3618057:1:exon
so has part: feature:3619614-3619663:1:exon
so has part: feature:3626075-3626124:1:exon
so has part: feature:3626835-3626882:1:exon
so has part: feature:3628558-3628654:1:exon

XP_048190150.1
type: Protein
SIO_000068: ncbiprotein

position:3610729:1
position: 3610729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3628654:1
position: 3628654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3610729-3610892:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3612445-3612615:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3612914-3613012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3615148-3615223:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3616518-3616603:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3617930-3618057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3619614-3619663:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3626075-3626124:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3626835-3626882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3628558-3628654:1:exon

Hrh2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Hrh2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3672576..3684323
location: region:3672576-3684323:1
so has part: feature:3672576-3684323:1:exon
subclass of: SO_0000010

125342143
type: Gene
SIO_000068: ncbigene

position:3672576:1
position: 3672576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3684323:1
position: 3684323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3672576-3684323:1:exon

Hrh2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hrh2
product: histamine receptor H2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048334275.1
SIO_010081: Hrh2
subclass of: SO_0000673
so part of: Hrh2
location: join(3672576..3673826,3684008..3684323)
location: region:3672576-3684323:1
so has part: feature:3672576-3673826:1:exon
so has part: feature:3684008-3684323:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3672576-3673826:1:exon

position:3673826:1
position: 3673826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3684008-3684323:1:exon

position:3684008:1
position: 3684008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Hrh2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hrh2
product: histamine receptor H2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048334276.1
SIO_010081: Hrh2
subclass of: SO_0000673
so part of: Hrh2
location: join(3672576..3673871,3684008..3684081)
location: region:3672576-3684081:1
so has part: feature:3672576-3673871:1:exon
so has part: feature:3684008-3684081:1:exon

position:3684081:1
position: 3684081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3672576-3673871:1:exon

position:3673871:1
position: 3673871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3684008-3684081:1:exon

Hrh2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hrh2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histamine H2 receptor isoform X1
translation: MEPNGTASSFCLESTPFKVALSVVLTVLILITVAGNVVVCLAVSLNRRLQNLTNCFIVSLAITDLLLGLLVLPFSAVYQLSCRWSFGRVLCNIYTSLDVMLCTASILNLFMISLDRYCAVTDPLRYSVLVTPVRVAVSLVFIWVISITLSFLSIHLGWNSRHDHGRHNHTPAECKVQVNPEYGLVDSLVTFYLPLLVMCITYYRIFKIARDQAKRINHLSTWKVATVREHKATVTLAAVLGAFIVCWFPYFTVFVYRGYNGDINQVIEAIVLWLGYANSALNPILYAALNRDFRTAYQRLFHCRPASRSVPATSLRSNHSLLARSQRQELRVREEKALKLQACGSGKEILAPQGDTDRRPALSCSACSSSLLSCCKSLWGASDPETPQGAPRGSYPGDPCLRRQRGTPPRKL
SIO_010081: Hrh2
subclass of: SO_0000673
so part of: Hrh2
location: join(3672754..3673826,3684008..3684173)
location: region:3672754-3684173:1
so has part: feature:3672754-3673826:1:exon
so has part: feature:3684008-3684173:1:exon

XP_048190232.1
type: Protein
SIO_000068: ncbiprotein

position:3672754:1
position: 3672754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3684173:1
position: 3684173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3672754-3673826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3684008-3684173:1:exon

Hrh2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hrh2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histamine H2 receptor isoform X2
translation: MEPNGTASSFCLESTPFKVALSVVLTVLILITVAGNVVVCLAVSLNRRLQNLTNCFIVSLAITDLLLGLLVLPFSAVYQLSCRWSFGRVLCNIYTSLDVMLCTASILNLFMISLDRYCAVTDPLRYSVLVTPVRVAVSLVFIWVISITLSFLSIHLGWNSRHDHGRHNHTPAECKVQVNPEYGLVDSLVTFYLPLLVMCITYYRIFKIARDQAKRINHLSTWKVATVREHKATVTLAAVLGAFIVCWFPYFTVFVYRGYNGDINQVIEAIVLWLGYANSALNPILYAALNRDFRTAYQRLFHCRPASRSVPATSLRSNHSLLARSQRQELRVREEKALKLQACGSGKEILAPQGDTDR
SIO_010081: Hrh2
subclass of: SO_0000673
so part of: Hrh2
location: 3672754..3673830
location: region:3672754-3673830:1
so has part: feature:3672754-3673830:1:exon

XP_048190233.1
type: Protein
SIO_000068: ncbiprotein

position:3673830:1
position: 3673830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3672754-3673830:1:exon

Trnaa-ggc
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Trnaa-ggc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3700677..3700750
location: region:3700677-3700750:1
so has part: feature:3700677-3700750:1:exon
subclass of: SO_0000663

125342279
type: Gene
SIO_000068: ncbigene

position:3700677:1
position: 3700677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3700750:1
position: 3700750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3700677-3700750:1:exon

Trnaa-ggc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 214514
gene: Trnaa-ggc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA alanine (anticodon GGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3700710..3700712,aa:Ala,seq:ggc)
SIO_010081: Trnaa-ggc
subclass of: SO_0000673
so part of: Trnaa-ggc
location: 3700677..3700750
location: region:3700677-3700750:1
so has part: feature:3700677-3700750:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3700677-3700750:1:exon

Cplx2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Cplx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3754550..3802822
location: region:3754550-3802822:1
so has part: feature:3754550-3802822:1:exon
subclass of: SO_0000010

125342146
type: Gene
SIO_000068: ncbigene

position:3754550:1
position: 3754550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3802822:1
position: 3802822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3754550-3802822:1:exon

Cplx2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cplx2
product: complexin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048334281.1
SIO_010081: Cplx2
subclass of: SO_0000673
so part of: Cplx2
location: join(3754550..3754634,3801392..3801509,3801648..3801823,3802614..3802822)
location: region:3754550-3802822:1
so has part: feature:3754550-3754634:1:exon
so has part: feature:3801392-3801509:1:exon
so has part: feature:3801648-3801823:1:exon
so has part: feature:3802614-3802822:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3754550-3754634:1:exon

position:3754634:1
position: 3754634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3801392-3801509:1:exon

position:3801392:1
position: 3801392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3801509:1
position: 3801509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3801648-3801823:1:exon

position:3801648:1
position: 3801648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3801823:1
position: 3801823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3802614-3802822:1:exon

position:3802614:1
position: 3802614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cplx2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cplx2
product: complexin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048334280.1
SIO_010081: Cplx2
subclass of: SO_0000673
so part of: Cplx2
location: join(3795936..3796027,3801392..3801509,3801648..3801823,3802614..3802822)
location: region:3795936-3802822:1
so has part: feature:3795936-3796027:1:exon
so has part: feature:3801392-3801509:1:exon
so has part: feature:3801648-3801823:1:exon
so has part: feature:3802614-3802822:1:exon

position:3795936:1
position: 3795936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3795936-3796027:1:exon

position:3796027:1
position: 3796027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3801392-3801509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3801648-3801823:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3802614-3802822:1:exon

Cplx2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cplx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complexin-2
translation: MDFVMKQALGGATKDMGKMLGGEEEKDPDAQKKEEERQEALRQQEEERKAKHARMEAEREKVRQQIRDKYGLKKKEEKEAEEKAALEQPCEGSLTRPKKAIPAGCGDEEEEEEESILDTVLKYLPGPLQDMFKK
SIO_010081: Cplx2
subclass of: SO_0000673
so part of: Cplx2
location: join(3801479..3801509,3801648..3801823,3802614..3802811)
location: region:3801479-3802811:1
so has part: feature:3801479-3801509:1:exon
so has part: feature:3801648-3801823:1:exon
so has part: feature:3802614-3802811:1:exon

XP_048190237.1
type: Protein
SIO_000068: ncbiprotein

position:3801479:1
position: 3801479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3802811:1
position: 3802811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3801479-3801509:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3801648-3801823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3802614-3802811:1:exon

Cplx2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cplx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complexin-2
translation: MDFVMKQALGGATKDMGKMLGGEEEKDPDAQKKEEERQEALRQQEEERKAKHARMEAEREKVRQQIRDKYGLKKKEEKEAEEKAALEQPCEGSLTRPKKAIPAGCGDEEEEEEESILDTVLKYLPGPLQDMFKK
SIO_010081: Cplx2
subclass of: SO_0000673
so part of: Cplx2
location: join(3801479..3801509,3801648..3801823,3802614..3802811)
location: region:3801479-3802811:1
so has part: feature:3801479-3801509:1:exon
so has part: feature:3801648-3801823:1:exon
so has part: feature:3802614-3802811:1:exon

XP_048190238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3801479-3801509:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3801648-3801823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3802614-3802811:1:exon

Thoc3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Thoc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3841991..3847875)
location: region:3841991-3847875:-1
so has part: feature:3841991-3847875:-1:exon
subclass of: SO_0000010

125342181
type: Gene
SIO_000068: ncbigene

position:3841991:-1
position: 3841991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3847875:-1
position: 3847875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3841991-3847875:-1:exon

Thoc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Thoc3
product: THO complex 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048334321.1
SIO_010081: Thoc3
subclass of: SO_0000673
so part of: Thoc3
location: complement(join(3841991..3842568,3843541..3843641,3843940..3844101,3845596..3845800,3846729..3846885,3847582..3847875))
location: region:3841991-3847875:-1
so has part: feature:3847582-3847875:-1:exon
so has part: feature:3846729-3846885:-1:exon
so has part: feature:3845596-3845800:-1:exon
so has part: feature:3843940-3844101:-1:exon
so has part: feature:3843541-3843641:-1:exon
so has part: feature:3841991-3842568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3847582-3847875:-1:exon

position:3847582:-1
position: 3847582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3846729-3846885:-1:exon

position:3846729:-1
position: 3846729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3846885:-1
position: 3846885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3845596-3845800:-1:exon

position:3845596:-1
position: 3845596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3845800:-1
position: 3845800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3843940-3844101:-1:exon

position:3843940:-1
position: 3843940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3844101:-1
position: 3844101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3843541-3843641:-1:exon

position:3843541:-1
position: 3843541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3843641:-1
position: 3843641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3841991-3842568:-1:exon

position:3842568:-1
position: 3842568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Thoc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Thoc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THO complex subunit 3
translation: MAAPAAAVGPSALGPSGPGSLAAWSAVSGGPSRYVLGMQELFRGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPTGRYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS
SIO_010081: Thoc3
subclass of: SO_0000673
so part of: Thoc3
location: complement(join(3842405..3842568,3843541..3843641,3843940..3844101,3845596..3845800,3846729..3846885,3847582..3847848))
location: region:3842405-3847848:-1
so has part: feature:3847582-3847848:-1:exon
so has part: feature:3846729-3846885:-1:exon
so has part: feature:3845596-3845800:-1:exon
so has part: feature:3843940-3844101:-1:exon
so has part: feature:3843541-3843641:-1:exon
so has part: feature:3842405-3842568:-1:exon

XP_048190278.1
type: Protein
SIO_000068: ncbiprotein

position:3842405:-1
position: 3842405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3847848:-1
position: 3847848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3847582-3847848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3846729-3846885:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3845596-3845800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3843940-3844101:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3843541-3843641:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3842405-3842568:-1:exon

Simc1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Simc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3869748..3907804
location: region:3869748-3907804:1
so has part: feature:3869748-3907804:1:exon
subclass of: SO_0000010

125342180
type: Gene
SIO_000068: ncbigene

position:3869748:1
position: 3869748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3907804:1
position: 3907804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3869748-3907804:1:exon

Simc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Simc1
product: SUMO interacting motifs containing 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334319.1
SIO_010081: Simc1
subclass of: SO_0000673
so part of: Simc1
location: join(3869748..3870001,3882009..3883919,3884884..3885116,3886258..3886327,3888174..3888328,3891187..3891339,3894367..3894495,3896837..3896993,3905076..3905163,3906997..3907804)
location: region:3869748-3907804:1
so has part: feature:3869748-3870001:1:exon
so has part: feature:3882009-3883919:1:exon
so has part: feature:3884884-3885116:1:exon
so has part: feature:3886258-3886327:1:exon
so has part: feature:3888174-3888328:1:exon
so has part: feature:3891187-3891339:1:exon
so has part: feature:3894367-3894495:1:exon
so has part: feature:3896837-3896993:1:exon
so has part: feature:3905076-3905163:1:exon
so has part: feature:3906997-3907804:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3869748-3870001:1:exon

position:3870001:1
position: 3870001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3882009-3883919:1:exon

position:3882009:1
position: 3882009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3883919:1
position: 3883919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3884884-3885116:1:exon

position:3884884:1
position: 3884884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3885116:1
position: 3885116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3886258-3886327:1:exon

position:3886258:1
position: 3886258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3886327:1
position: 3886327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3888174-3888328:1:exon

position:3888174:1
position: 3888174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3888328:1
position: 3888328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3891187-3891339:1:exon

position:3891187:1
position: 3891187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3891339:1
position: 3891339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3894367-3894495:1:exon

position:3894367:1
position: 3894367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3894495:1
position: 3894495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3896837-3896993:1:exon

position:3896837:1
position: 3896837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3896993:1
position: 3896993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3905076-3905163:1:exon

position:3905076:1
position: 3905076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3905163:1
position: 3905163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3906997-3907804:1:exon

position:3906997:1
position: 3906997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Simc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Simc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SUMO-interacting motif-containing protein 1
translation: MEDFIVISDDSGSESSGSARSGRARRLRRALSRTPGALPRRTVDFIDLTREPRPRAKDRNGHCVIDLTTSEEESRPIATLDLTSDPVAPSQKEPASLQTCASFSNKELESQVDGSSRPPAGSIVDSNPSHLHAEQSACEGVASRDSAFPVQPNGGSATCRGDLSFLASLQLSSFSPISNNSNSSNERAPLPCPQQDVPCPLQALPCPLRASPCPPRACAYPPRPSSCPPRALSCPSETVPCQPQVLSQPLQGVPRALQNVHCAPQNVPCTPQNVPCAPQNVPCAPQNVPCAPQNVPCAPQNVPCAPQNVPCAPQNVPCPQNVPCALQNVPCSSQNASCSSQNVPGALQNVPCAPQNMLCAPQNVPCALQNIPCVPQLVPCALQNVPGATKNVPCSPQNVPCALQNVPCSPQNVPCALQNVPCSPQNVPCALQNVPCSPQNVPCAPRNVPPSPQRVLCAPQQVPCAPQNMPSSPQNVPCAPQILSHPPQDFSWHPQHPPSAPQDCLGLPPHLPGPPQNPHTPPMPHTLGDLSQLPGAVPQPQATVPQQSDDMSLGPAPSVAGHLSHPAQDQPPSDQNDILSRDTPMDISAPSSPSCFPMPASPQPEAPSVKVPWLPVTPIPPKKDPSPPESASAKSAQVQARVPQGGVFNRPCLHRLKYFLRPPVHHLFFQTLIPDKDTRESKGQKLEPIPNRRLRMVANTIEENFPLGTVQFLMDFVSPQHYPPRDIVAHIIQKILLSGSETVDVLKEAYMLLMKIQQLHPANAKAVEWDWKLLTYVMEEEGQTLPGRVLFLRYVVQTLEDDFQQTLRRQRHHLQQSIANTVLSCDKQPHNVRDVIKWLVKAVTEDGLTPPTQGNQTSSGSGISKASSDHPSPQLNLNKNTNQLIVCQLQRMLSIAVEVDRTPTCSSNKIAEMMFGFVLDIPKRSQREMFFSTMESHLLRCKVLEIIFLHGCQTPTRLPLSLAQALYFLNNSTSLLKCQQSEKSQWQIWDELVEHLQFLLSSYQHVLREHLRSSVIDRKDLIIKRIKPKPQQGDDITVVDVEKQIEAFRGRLVQMLGEPLVPQLQNKVHLLKLLLFYAADLNPDTDPGPKHWSHP
SIO_010081: Simc1
subclass of: SO_0000673
so part of: Simc1
location: join(3869873..3870001,3882009..3883919,3884884..3885116,3886258..3886327,3888174..3888328,3891187..3891339,3894367..3894495,3896837..3896993,3905076..3905163,3906997..3907259)
location: region:3869873-3907259:1
so has part: feature:3869873-3870001:1:exon
so has part: feature:3882009-3883919:1:exon
so has part: feature:3884884-3885116:1:exon
so has part: feature:3886258-3886327:1:exon
so has part: feature:3888174-3888328:1:exon
so has part: feature:3891187-3891339:1:exon
so has part: feature:3894367-3894495:1:exon
so has part: feature:3896837-3896993:1:exon
so has part: feature:3905076-3905163:1:exon
so has part: feature:3906997-3907259:1:exon

XP_048190276.1
type: Protein
SIO_000068: ncbiprotein

position:3869873:1
position: 3869873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3907259:1
position: 3907259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3869873-3870001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3882009-3883919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3884884-3885116:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3886258-3886327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3888174-3888328:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3891187-3891339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3894367-3894495:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3896837-3896993:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3905076-3905163:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3906997-3907259:1:exon

Kiaa1191
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Kiaa1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3909357..3922363)
location: region:3909357-3922363:-1
so has part: feature:3909357-3922363:-1:exon
subclass of: SO_0000010

125342182
type: Gene
SIO_000068: ncbigene

position:3909357:-1
position: 3909357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3922363:-1
position: 3922363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3909357-3922363:-1:exon

Kiaa1191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Kiaa1191
product: KIAA1191 ortholog, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048334327.1
SIO_010081: Kiaa1191
subclass of: SO_0000673
so part of: Kiaa1191
location: complement(join(3909357..3910007,3910118..3910260,3910658..3910764,3911251..3911375,3920943..3921166))
location: region:3909357-3921166:-1
so has part: feature:3920943-3921166:-1:exon
so has part: feature:3911251-3911375:-1:exon
so has part: feature:3910658-3910764:-1:exon
so has part: feature:3910118-3910260:-1:exon
so has part: feature:3909357-3910007:-1:exon

position:3921166:-1
position: 3921166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3920943-3921166:-1:exon

position:3920943:-1
position: 3920943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3911251-3911375:-1:exon

position:3911251:-1
position: 3911251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3911375:-1
position: 3911375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3910658-3910764:-1:exon

position:3910658:-1
position: 3910658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3910764:-1
position: 3910764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3910118-3910260:-1:exon

position:3910118:-1
position: 3910118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3910260:-1
position: 3910260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3909357-3910007:-1:exon

position:3910007:-1
position: 3910007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Kiaa1191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Kiaa1191
product: KIAA1191 ortholog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048334326.1
SIO_010081: Kiaa1191
subclass of: SO_0000673
so part of: Kiaa1191
location: complement(join(3909358..3910007,3910118..3910260,3910658..3910764,3911251..3911375,3920943..3921028,3921254..3921361,3922222..3922292))
location: region:3909358-3922292:-1
so has part: feature:3922222-3922292:-1:exon
so has part: feature:3921254-3921361:-1:exon
so has part: feature:3920943-3921028:-1:exon
so has part: feature:3911251-3911375:-1:exon
so has part: feature:3910658-3910764:-1:exon
so has part: feature:3910118-3910260:-1:exon
so has part: feature:3909358-3910007:-1:exon

position:3909358:-1
position: 3909358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3922292:-1
position: 3922292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3922222-3922292:-1:exon

position:3922222:-1
position: 3922222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3921254-3921361:-1:exon

position:3921254:-1
position: 3921254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3921361:-1
position: 3921361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3920943-3921028:-1:exon

position:3921028:-1
position: 3921028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3911251-3911375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3910658-3910764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3910118-3910260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3909358-3910007:-1:exon

Kiaa1191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Kiaa1191
product: KIAA1191 ortholog, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048334328.1
SIO_010081: Kiaa1191
subclass of: SO_0000673
so part of: Kiaa1191
location: complement(join(3909364..3910007,3910118..3910260,3910658..3910764,3911251..3911375,3914092..3914203,3922222..3922363))
location: region:3909364-3922363:-1
so has part: feature:3922222-3922363:-1:exon
so has part: feature:3914092-3914203:-1:exon
so has part: feature:3911251-3911375:-1:exon
so has part: feature:3910658-3910764:-1:exon
so has part: feature:3910118-3910260:-1:exon
so has part: feature:3909364-3910007:-1:exon

position:3909364:-1
position: 3909364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3922222-3922363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3914092-3914203:-1:exon

position:3914092:-1
position: 3914092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3914203:-1
position: 3914203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3911251-3911375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3910658-3910764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3910118-3910260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3909364-3910007:-1:exon

Kiaa1191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Kiaa1191
product: KIAA1191 ortholog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048334324.1
SIO_010081: Kiaa1191
subclass of: SO_0000673
so part of: Kiaa1191
location: complement(join(3909367..3910007,3910118..3910260,3910658..3910764,3911251..3911375,3914092..3914203,3917482..3917660,3922222..3922342))
location: region:3909367-3922342:-1
so has part: feature:3922222-3922342:-1:exon
so has part: feature:3917482-3917660:-1:exon
so has part: feature:3914092-3914203:-1:exon
so has part: feature:3911251-3911375:-1:exon
so has part: feature:3910658-3910764:-1:exon
so has part: feature:3910118-3910260:-1:exon
so has part: feature:3909367-3910007:-1:exon

position:3909367:-1
position: 3909367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3922342:-1
position: 3922342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3922222-3922342:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3917482-3917660:-1:exon

position:3917482:-1
position: 3917482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3917660:-1
position: 3917660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3914092-3914203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3911251-3911375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3910658-3910764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3910118-3910260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3909367-3910007:-1:exon

Kiaa1191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Kiaa1191
product: KIAA1191 ortholog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048334325.1
SIO_010081: Kiaa1191
subclass of: SO_0000673
so part of: Kiaa1191
location: complement(join(3909367..3910007,3910118..3910260,3910658..3910764,3911251..3911375,3914092..3914203,3917482..3917748,3918059..3918086))
location: region:3909367-3918086:-1
so has part: feature:3918059-3918086:-1:exon
so has part: feature:3917482-3917748:-1:exon
so has part: feature:3914092-3914203:-1:exon
so has part: feature:3911251-3911375:-1:exon
so has part: feature:3910658-3910764:-1:exon
so has part: feature:3910118-3910260:-1:exon
so has part: feature:3909367-3910007:-1:exon

position:3918086:-1
position: 3918086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3918059-3918086:-1:exon

position:3918059:-1
position: 3918059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3917482-3917748:-1:exon

position:3917748:-1
position: 3917748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3914092-3914203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3911251-3911375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3910658-3910764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3910118-3910260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3909367-3910007:-1:exon

Kiaa1191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Kiaa1191
product: KIAA1191 ortholog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048334323.1
SIO_010081: Kiaa1191
subclass of: SO_0000673
so part of: Kiaa1191
location: complement(join(3909368..3910007,3910118..3910260,3910658..3910764,3911251..3911375,3914092..3914203,3917482..3917660,3920943..3921028,3922222..3922311))
location: region:3909368-3922311:-1
so has part: feature:3922222-3922311:-1:exon
so has part: feature:3920943-3921028:-1:exon
so has part: feature:3917482-3917660:-1:exon
so has part: feature:3914092-3914203:-1:exon
so has part: feature:3911251-3911375:-1:exon
so has part: feature:3910658-3910764:-1:exon
so has part: feature:3910118-3910260:-1:exon
so has part: feature:3909368-3910007:-1:exon

position:3909368:-1
position: 3909368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3922311:-1
position: 3922311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3922222-3922311:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3920943-3921028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3917482-3917660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3914092-3914203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3911251-3911375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3910658-3910764:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3910118-3910260:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3909368-3910007:-1:exon

Kiaa1191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Kiaa1191
product: KIAA1191 ortholog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048334322.1
SIO_010081: Kiaa1191
subclass of: SO_0000673
so part of: Kiaa1191
location: complement(join(3909368..3910007,3910118..3910260,3910658..3910764,3911251..3911375,3914092..3914203,3917482..3917660,3920943..3921028,3921254..3921361,3922222..3922292))
location: region:3909368-3922292:-1
so has part: feature:3922222-3922292:-1:exon
so has part: feature:3921254-3921361:-1:exon
so has part: feature:3920943-3921028:-1:exon
so has part: feature:3917482-3917660:-1:exon
so has part: feature:3914092-3914203:-1:exon
so has part: feature:3911251-3911375:-1:exon
so has part: feature:3910658-3910764:-1:exon
so has part: feature:3910118-3910260:-1:exon
so has part: feature:3909368-3910007:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3922222-3922292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3921254-3921361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3920943-3921028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3917482-3917660:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3914092-3914203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3911251-3911375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3910658-3910764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3910118-3910260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3909368-3910007:-1:exon

Kiaa1191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Kiaa1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative monooxygenase p33MONOX isoform X3
translation: MAARQPEVPEQTQEDIQRFEQQAGLRDVGYTPHKGLTTEETKYLRVAEALHKLKLQSGDLTREEKQPASAQSTPSSTPQSSPKHKARGWFTPASSIALPGPNPSTMDPGSGDKDRNVSDKWSLFGSRTLQKSDSGGFTIQAYKGAQKPTPMELIRAQATRPAEDPATFKPPKMDAPMTEGKKPAPRTHTLKPRDFNVLTPTGF
SIO_010081: Kiaa1191
subclass of: SO_0000673
so part of: Kiaa1191
location: complement(join(3909799..3910007,3910118..3910260,3910658..3910764,3911251..3911375,3920943..3920970))
location: region:3909799-3920970:-1
so has part: feature:3920943-3920970:-1:exon
so has part: feature:3911251-3911375:-1:exon
so has part: feature:3910658-3910764:-1:exon
so has part: feature:3910118-3910260:-1:exon
so has part: feature:3909799-3910007:-1:exon

XP_048190283.1
type: Protein
SIO_000068: ncbiprotein

position:3909799:-1
position: 3909799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3920970:-1
position: 3920970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3920943-3920970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3911251-3911375:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3910658-3910764:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3910118-3910260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3909799-3910007:-1:exon

Kiaa1191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Kiaa1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative monooxygenase p33MONOX isoform X3
translation: MAARQPEVPEQTQEDIQRFEQQAGLRDVGYTPHKGLTTEETKYLRVAEALHKLKLQSGDLTREEKQPASAQSTPSSTPQSSPKHKARGWFTPASSIALPGPNPSTMDPGSGDKDRNVSDKWSLFGSRTLQKSDSGGFTIQAYKGAQKPTPMELIRAQATRPAEDPATFKPPKMDAPMTEGKKPAPRTHTLKPRDFNVLTPTGF
SIO_010081: Kiaa1191
subclass of: SO_0000673
so part of: Kiaa1191
location: complement(join(3909799..3910007,3910118..3910260,3910658..3910764,3911251..3911375,3920943..3920970))
location: region:3909799-3920970:-1
so has part: feature:3920943-3920970:-1:exon
so has part: feature:3911251-3911375:-1:exon
so has part: feature:3910658-3910764:-1:exon
so has part: feature:3910118-3910260:-1:exon
so has part: feature:3909799-3910007:-1:exon

XP_048190284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3920943-3920970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3911251-3911375:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3910658-3910764:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3910118-3910260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3909799-3910007:-1:exon

Kiaa1191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Kiaa1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative monooxygenase p33MONOX isoform X1
translation: MAARQPEVPALGPSGPLGKMSLPIGMCRRAFSYDDALEDPAPMTPPPSDMGSIPWKPVIPERKYQLLAKEEGEASVSPPAEATEGADKVPVVKAKATHVIMNSLITKQTQEDIQRFEQQAGLRDVGYTPHKGLTTEETKYLRVAEALHKLKLQSGDLTREEKQPASAQSTPSSTPQSSPKHKARGWFTPASSIALPGPNPSTMDPGSGDKDRNVSDKWSLFGSRTLQKSDSGGFTIQAYKGAQKPTPMELIRAQATRPAEDPATFKPPKMDAPMTEGKKPAPRTHTLKPRDFNVLTPTGF
SIO_010081: Kiaa1191
subclass of: SO_0000673
so part of: Kiaa1191
location: complement(join(3909799..3910007,3910118..3910260,3910658..3910764,3911251..3911375,3914092..3914203,3917482..3917660,3920943..3920970))
location: region:3909799-3920970:-1
so has part: feature:3920943-3920970:-1:exon
so has part: feature:3917482-3917660:-1:exon
so has part: feature:3914092-3914203:-1:exon
so has part: feature:3911251-3911375:-1:exon
so has part: feature:3910658-3910764:-1:exon
so has part: feature:3910118-3910260:-1:exon
so has part: feature:3909799-3910007:-1:exon

XP_048190279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3920943-3920970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3917482-3917660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3914092-3914203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3911251-3911375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3910658-3910764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3910118-3910260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3909799-3910007:-1:exon

Kiaa1191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Kiaa1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative monooxygenase p33MONOX isoform X1
translation: MAARQPEVPALGPSGPLGKMSLPIGMCRRAFSYDDALEDPAPMTPPPSDMGSIPWKPVIPERKYQLLAKEEGEASVSPPAEATEGADKVPVVKAKATHVIMNSLITKQTQEDIQRFEQQAGLRDVGYTPHKGLTTEETKYLRVAEALHKLKLQSGDLTREEKQPASAQSTPSSTPQSSPKHKARGWFTPASSIALPGPNPSTMDPGSGDKDRNVSDKWSLFGSRTLQKSDSGGFTIQAYKGAQKPTPMELIRAQATRPAEDPATFKPPKMDAPMTEGKKPAPRTHTLKPRDFNVLTPTGF
SIO_010081: Kiaa1191
subclass of: SO_0000673
so part of: Kiaa1191
location: complement(join(3909799..3910007,3910118..3910260,3910658..3910764,3911251..3911375,3914092..3914203,3917482..3917660,3920943..3920970))
location: region:3909799-3920970:-1
so has part: feature:3920943-3920970:-1:exon
so has part: feature:3917482-3917660:-1:exon
so has part: feature:3914092-3914203:-1:exon
so has part: feature:3911251-3911375:-1:exon
so has part: feature:3910658-3910764:-1:exon
so has part: feature:3910118-3910260:-1:exon
so has part: feature:3909799-3910007:-1:exon

XP_048190280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3920943-3920970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3917482-3917660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3914092-3914203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3911251-3911375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3910658-3910764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3910118-3910260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3909799-3910007:-1:exon

Kiaa1191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Kiaa1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative monooxygenase p33MONOX isoform X2
translation: MSLPIGMCRRAFSYDDALEDPAPMTPPPSDMGSIPWKPVIPERKYQLLAKEEGEASVSPPAEATEGADKVPVVKAKATHVIMNSLITKQTQEDIQRFEQQAGLRDVGYTPHKGLTTEETKYLRVAEALHKLKLQSGDLTREEKQPASAQSTPSSTPQSSPKHKARGWFTPASSIALPGPNPSTMDPGSGDKDRNVSDKWSLFGSRTLQKSDSGGFTIQAYKGAQKPTPMELIRAQATRPAEDPATFKPPKMDAPMTEGKKPAPRTHTLKPRDFNVLTPTGF
SIO_010081: Kiaa1191
subclass of: SO_0000673
so part of: Kiaa1191
location: complement(join(3909799..3910007,3910118..3910260,3910658..3910764,3911251..3911375,3914092..3914203,3917482..3917631))
location: region:3909799-3917631:-1
so has part: feature:3917482-3917631:-1:exon
so has part: feature:3914092-3914203:-1:exon
so has part: feature:3911251-3911375:-1:exon
so has part: feature:3910658-3910764:-1:exon
so has part: feature:3910118-3910260:-1:exon
so has part: feature:3909799-3910007:-1:exon

XP_048190281.1
type: Protein
SIO_000068: ncbiprotein

position:3917631:-1
position: 3917631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3917482-3917631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3914092-3914203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3911251-3911375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3910658-3910764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3910118-3910260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3909799-3910007:-1:exon

Kiaa1191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Kiaa1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative monooxygenase p33MONOX isoform X2
translation: MSLPIGMCRRAFSYDDALEDPAPMTPPPSDMGSIPWKPVIPERKYQLLAKEEGEASVSPPAEATEGADKVPVVKAKATHVIMNSLITKQTQEDIQRFEQQAGLRDVGYTPHKGLTTEETKYLRVAEALHKLKLQSGDLTREEKQPASAQSTPSSTPQSSPKHKARGWFTPASSIALPGPNPSTMDPGSGDKDRNVSDKWSLFGSRTLQKSDSGGFTIQAYKGAQKPTPMELIRAQATRPAEDPATFKPPKMDAPMTEGKKPAPRTHTLKPRDFNVLTPTGF
SIO_010081: Kiaa1191
subclass of: SO_0000673
so part of: Kiaa1191
location: complement(join(3909799..3910007,3910118..3910260,3910658..3910764,3911251..3911375,3914092..3914203,3917482..3917631))
location: region:3909799-3917631:-1
so has part: feature:3917482-3917631:-1:exon
so has part: feature:3914092-3914203:-1:exon
so has part: feature:3911251-3911375:-1:exon
so has part: feature:3910658-3910764:-1:exon
so has part: feature:3910118-3910260:-1:exon
so has part: feature:3909799-3910007:-1:exon

XP_048190282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3917482-3917631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3914092-3914203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3911251-3911375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3910658-3910764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3910118-3910260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3909799-3910007:-1:exon

Kiaa1191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Kiaa1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative monooxygenase p33MONOX isoform X4
translation: MNSLITKQTQEDIQRFEQQAGLRDVGYTPHKGLTTEETKYLRVAEALHKLKLQSGDLTREEKQPASAQSTPSSTPQSSPKHKARGWFTPASSIALPGPNPSTMDPGSGDKDRNVSDKWSLFGSRTLQKSDSGGFTIQAYKGAQKPTPMELIRAQATRPAEDPATFKPPKMDAPMTEGKKPAPRTHTLKPRDFNVLTPTGF
SIO_010081: Kiaa1191
subclass of: SO_0000673
so part of: Kiaa1191
location: complement(join(3909799..3910007,3910118..3910260,3910658..3910764,3911251..3911375,3914092..3914110))
location: region:3909799-3914110:-1
so has part: feature:3914092-3914110:-1:exon
so has part: feature:3911251-3911375:-1:exon
so has part: feature:3910658-3910764:-1:exon
so has part: feature:3910118-3910260:-1:exon
so has part: feature:3909799-3910007:-1:exon

XP_048190285.1
type: Protein
SIO_000068: ncbiprotein

position:3914110:-1
position: 3914110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3914092-3914110:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3911251-3911375:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3910658-3910764:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3910118-3910260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3909799-3910007:-1:exon

LOC125342188
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3912065..3915886
location: region:3912065-3915886:1
so has part: feature:3912065-3915886:1:exon
subclass of: SO_0000011

125342188
type: Gene
SIO_000068: ncbigene

position:3912065:1
position: 3912065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3915886:1
position: 3915886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3912065-3915886:1:exon

LOC125342188
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342188
product: uncharacterized LOC125342188
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007209159.1
SIO_010081: LOC125342188
subclass of: SO_0000673
so part of: LOC125342188
location: join(3912065..3912105,3915768..3915886)
location: region:3912065-3915886:1
so has part: feature:3912065-3912105:1:exon
so has part: feature:3915768-3915886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3912065-3912105:1:exon

position:3912105:1
position: 3912105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3915768-3915886:1:exon

position:3915768:1
position: 3915768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125342189
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3924346..3930870)
location: region:3924346-3930870:-1
so has part: feature:3924346-3930870:-1:exon
subclass of: SO_0000011

125342189
type: Gene
SIO_000068: ncbigene

position:3924346:-1
position: 3924346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3930870:-1
position: 3930870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3924346-3930870:-1:exon

LOC125342189
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125342189
product: uncharacterized LOC125342189
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007209160.1
SIO_010081: LOC125342189
subclass of: SO_0000673
so part of: LOC125342189
location: complement(join(3924346..3924405,3927013..3927019,3930774..3930870))
location: region:3924346-3930870:-1
so has part: feature:3930774-3930870:-1:exon
so has part: feature:3927013-3927019:-1:exon
so has part: feature:3924346-3924405:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3930774-3930870:-1:exon

position:3930774:-1
position: 3930774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3927013-3927019:-1:exon

position:3927013:-1
position: 3927013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3927019:-1
position: 3927019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3924346-3924405:-1:exon

position:3924405:-1
position: 3924405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Arl10
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Arl10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3928836..3936186
location: region:3928836-3936186:1
so has part: feature:3928836-3936186:1:exon
subclass of: SO_0000010

125342187
type: Gene
SIO_000068: ncbigene

position:3928836:1
position: 3928836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3936186:1
position: 3936186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3928836-3936186:1:exon

Arl10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arl10
product: ADP ribosylation factor like GTPase 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334332.1
SIO_010081: Arl10
subclass of: SO_0000673
so part of: Arl10
location: join(3928836..3929048,3929643..3929859,3934842..3935017,3935816..3936186)
location: region:3928836-3936186:1
so has part: feature:3928836-3929048:1:exon
so has part: feature:3929643-3929859:1:exon
so has part: feature:3934842-3935017:1:exon
so has part: feature:3935816-3936186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3928836-3929048:1:exon

position:3929048:1
position: 3929048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3929643-3929859:1:exon

position:3929643:1
position: 3929643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3929859:1
position: 3929859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3934842-3935017:1:exon

position:3934842:1
position: 3934842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3935017:1
position: 3935017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3935816-3936186:1:exon

position:3935816:1
position: 3935816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Arl10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arl10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 10
translation: MAPRTLGPLVLALGGAAAVLGSVLFILWKAYFGPERRWGPDEAWWGAESASLPQWDEWEDDDEEDEEEEEGEPALEELEQREVLVLGLDGCGKSTFLRMLAGKPPLEGHVPTWGFNSVRLPTRNFEVDLLEIGGSQNLRFYWKEFVNEVDVLVFMVDSADRQRLPWARQELHKLLDKDPDLPVVVVANKQDLGEAMSVAELQQELGLQDVGFQREVFLLAASIAPAGPGFEEPGTVHIWKLLLELLS
SIO_010081: Arl10
subclass of: SO_0000673
so part of: Arl10
location: join(3928872..3929048,3929643..3929859,3934842..3935017,3935816..3935989)
location: region:3928872-3935989:1
so has part: feature:3928872-3929048:1:exon
so has part: feature:3929643-3929859:1:exon
so has part: feature:3934842-3935017:1:exon
so has part: feature:3935816-3935989:1:exon

XP_048190289.1
type: Protein
SIO_000068: ncbiprotein

position:3928872:1
position: 3928872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3935989:1
position: 3935989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3928872-3929048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3929643-3929859:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3934842-3935017:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3935816-3935989:1:exon

Nop16
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Nop16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3941470..3947539)
location: region:3941470-3947539:-1
so has part: feature:3941470-3947539:-1:exon
subclass of: SO_0000010

125342185
type: Gene
SIO_000068: ncbigene

position:3941470:-1
position: 3941470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3947539:-1
position: 3947539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3941470-3947539:-1:exon

Nop16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Nop16
product: NOP16 nucleolar protein
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334330.1
SIO_010081: Nop16
subclass of: SO_0000673
so part of: Nop16
location: complement(join(3941470..3941843,3943976..3944082,3944832..3944901,3947078..3947186,3947358..3947539))
location: region:3941470-3947539:-1
so has part: feature:3947358-3947539:-1:exon
so has part: feature:3947078-3947186:-1:exon
so has part: feature:3944832-3944901:-1:exon
so has part: feature:3943976-3944082:-1:exon
so has part: feature:3941470-3941843:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3947358-3947539:-1:exon

position:3947358:-1
position: 3947358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3947078-3947186:-1:exon

position:3947078:-1
position: 3947078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3947186:-1
position: 3947186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3944832-3944901:-1:exon

position:3944832:-1
position: 3944832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3944901:-1
position: 3944901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3943976-3944082:-1:exon

position:3943976:-1
position: 3943976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3944082:-1
position: 3944082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3941470-3941843:-1:exon

position:3941843:-1
position: 3941843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Nop16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Nop16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein 16
translation: MPKAKGKTRRQKFGYNVNRKRLNRNARRKAAPRIECSHIRHAWDHNKSVRQNLAEMGLAMDPNKAVPLRKRKVKLMEVDGKEGPKDIVRKPYVLNELEAEANLPEKKGNTLSRDLIDYVHYMVENHGEDYKAMARDEKNYYQDTPKQIRNKINVYKRFYPAEWQAFSESLQDKKMEVD
SIO_010081: Nop16
subclass of: SO_0000673
so part of: Nop16
location: complement(join(3941700..3941843,3943976..3944082,3944832..3944901,3947078..3947186,3947358..3947464))
location: region:3941700-3947464:-1
so has part: feature:3947358-3947464:-1:exon
so has part: feature:3947078-3947186:-1:exon
so has part: feature:3944832-3944901:-1:exon
so has part: feature:3943976-3944082:-1:exon
so has part: feature:3941700-3941843:-1:exon

XP_048190287.1
type: Protein
SIO_000068: ncbiprotein

position:3941700:-1
position: 3941700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3947464:-1
position: 3947464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3947358-3947464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3947078-3947186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3944832-3944901:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3943976-3944082:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3941700-3941843:-1:exon

Higd2a
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Higd2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3947699..3948609
location: region:3947699-3948609:1
so has part: feature:3947699-3948609:1:exon
subclass of: SO_0000010

125342186
type: Gene
SIO_000068: ncbigene

position:3947699:1
position: 3947699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3948609:1
position: 3948609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3947699-3948609:1:exon

Higd2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Higd2a
product: HIG1 hypoxia inducible domain family member 2A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334331.1
SIO_010081: Higd2a
subclass of: SO_0000673
so part of: Higd2a
location: join(3947699..3947915,3948208..3948609)
location: region:3947699-3948609:1
so has part: feature:3947699-3947915:1:exon
so has part: feature:3948208-3948609:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3947699-3947915:1:exon

position:3947915:1
position: 3947915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3948208-3948609:1:exon

position:3948208:1
position: 3948208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Higd2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Higd2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HIG1 domain family member 2A, mitochondrial
translation: MATPGPATPETPFEPSQTPVIEGFKPTAHYQKEESFKEKFIRKTRENPMVPIGCLGTVAALCYGLYSFHRGQTRRSQLMMRTRIAAQGFTIVALLLGLAASSMKSRA
SIO_010081: Higd2a
subclass of: SO_0000673
so part of: Higd2a
location: join(3947759..3947915,3948208..3948374)
location: region:3947759-3948374:1
so has part: feature:3947759-3947915:1:exon
so has part: feature:3948208-3948374:1:exon

XP_048190288.1
type: Protein
SIO_000068: ncbiprotein

position:3947759:1
position: 3947759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3948374:1
position: 3948374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3947759-3947915:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3948208-3948374:1:exon

Cltb
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Cltb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3951290..3969088)
location: region:3951290-3969088:-1
so has part: feature:3951290-3969088:-1:exon
subclass of: SO_0000010

125342183
type: Gene
SIO_000068: ncbigene

position:3951290:-1
position: 3951290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3969088:-1
position: 3969088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3951290-3969088:-1:exon

Cltb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cltb
product: clathrin light chain B
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334329.1
SIO_010081: Cltb
subclass of: SO_0000673
so part of: Cltb
location: complement(join(3951290..3951756,3955314..3955367,3957061..3957172,3957593..3957710,3962498..3962544,3968723..3969088))
location: region:3951290-3969088:-1
so has part: feature:3968723-3969088:-1:exon
so has part: feature:3962498-3962544:-1:exon
so has part: feature:3957593-3957710:-1:exon
so has part: feature:3957061-3957172:-1:exon
so has part: feature:3955314-3955367:-1:exon
so has part: feature:3951290-3951756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3968723-3969088:-1:exon

position:3968723:-1
position: 3968723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3962498-3962544:-1:exon

position:3962498:-1
position: 3962498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3962544:-1
position: 3962544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3957593-3957710:-1:exon

position:3957593:-1
position: 3957593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3957710:-1
position: 3957710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3957061-3957172:-1:exon

position:3957061:-1
position: 3957061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3957172:-1
position: 3957172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3955314-3955367:-1:exon

position:3955314:-1
position: 3955314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3955367:-1
position: 3955367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3951290-3951756:-1:exon

position:3951756:-1
position: 3951756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cltb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cltb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clathrin light chain B
translation: MADDFGFFSASESGVPEAAAAAAAEEDPAAAFLAQQESEIAGIENDDEAFGAPAGGPGAVAQPGPAGAGSEDMGTTVNGDVFQEANGPADGYAAIAQVDRLTQEPESIRKWREEQKKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR
SIO_010081: Cltb
subclass of: SO_0000673
so part of: Cltb
location: complement(join(3951585..3951756,3955314..3955367,3957061..3957172,3957593..3957710,3962498..3962544,3968723..3968924))
location: region:3951585-3968924:-1
so has part: feature:3968723-3968924:-1:exon
so has part: feature:3962498-3962544:-1:exon
so has part: feature:3957593-3957710:-1:exon
so has part: feature:3957061-3957172:-1:exon
so has part: feature:3955314-3955367:-1:exon
so has part: feature:3951585-3951756:-1:exon

XP_048190286.1
type: Protein
SIO_000068: ncbiprotein

position:3951585:-1
position: 3951585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3968924:-1
position: 3968924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3968723-3968924:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3962498-3962544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3957593-3957710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3957061-3957172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3955314-3955367:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3951585-3951756:-1:exon

Faf2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Faf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3974817..4031069
location: region:3974817-4031069:1
so has part: feature:3974817-4031069:1:exon
subclass of: SO_0000010

125342233
type: Gene
SIO_000068: ncbigene

position:3974817:1
position: 3974817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4031069:1
position: 4031069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3974817-4031069:1:exon

Faf2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 214514
gene: Faf2
product: Fas associated factor family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_007209179.1
SIO_010081: Faf2
so part of: Faf2
location: join(3974817..3974917,3994559..3994627,3997499..3997633,4001992..4002068,4006112..4006250,4007687..4007772,4007860..4007951,4009706..4009883,4012804..4012975,4013547..4013690,4016878..4017109,4017163..4017296,4031059..4031069)
location: region:3974817-4031069:1
so has part: feature:3974817-3974917:1:exon
so has part: feature:3994559-3994627:1:exon
so has part: feature:3997499-3997633:1:exon
so has part: feature:4001992-4002068:1:exon
so has part: feature:4006112-4006250:1:exon
so has part: feature:4007687-4007772:1:exon
so has part: feature:4007860-4007951:1:exon
so has part: feature:4009706-4009883:1:exon
so has part: feature:4012804-4012975:1:exon
so has part: feature:4013547-4013690:1:exon
so has part: feature:4016878-4017109:1:exon
so has part: feature:4017163-4017296:1:exon
so has part: feature:4031059-4031069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3974817-3974917:1:exon

position:3974917:1
position: 3974917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3994559-3994627:1:exon

position:3994559:1
position: 3994559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3994627:1
position: 3994627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3997499-3997633:1:exon

position:3997499:1
position: 3997499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3997633:1
position: 3997633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4001992-4002068:1:exon

position:4001992:1
position: 4001992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4002068:1
position: 4002068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4006112-4006250:1:exon

position:4006112:1
position: 4006112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4006250:1
position: 4006250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4007687-4007772:1:exon

position:4007687:1
position: 4007687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4007772:1
position: 4007772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4007860-4007951:1:exon

position:4007860:1
position: 4007860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4007951:1
position: 4007951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4009706-4009883:1:exon

position:4009706:1
position: 4009706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4009883:1
position: 4009883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4012804-4012975:1:exon

position:4012804:1
position: 4012804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4012975:1
position: 4012975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4013547-4013690:1:exon

position:4013547:1
position: 4013547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4013690:1
position: 4013690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4016878-4017109:1:exon

position:4016878:1
position: 4016878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4017109:1
position: 4017109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4017163-4017296:1:exon

position:4017163:1
position: 4017163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4017296:1
position: 4017296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4031059-4031069:1:exon

position:4031059:1
position: 4031059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Faf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Faf2
product: Fas associated factor family member 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334388.1
SIO_010081: Faf2
subclass of: SO_0000673
so part of: Faf2
location: join(3974817..3974917,3994559..3994627,3997499..3997633,4001992..4002068,4006112..4006250,4007687..4007772,4007860..4007951,4009706..4009883,4012804..4012975,4013547..4013690,4016878..4017109,4017163..4017775)
location: region:3974817-4017775:1
so has part: feature:3974817-3974917:1:exon
so has part: feature:3994559-3994627:1:exon
so has part: feature:3997499-3997633:1:exon
so has part: feature:4001992-4002068:1:exon
so has part: feature:4006112-4006250:1:exon
so has part: feature:4007687-4007772:1:exon
so has part: feature:4007860-4007951:1:exon
so has part: feature:4009706-4009883:1:exon
so has part: feature:4012804-4012975:1:exon
so has part: feature:4013547-4013690:1:exon
so has part: feature:4016878-4017109:1:exon
so has part: feature:4017163-4017775:1:exon

position:4017775:1
position: 4017775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3974817-3974917:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3994559-3994627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3997499-3997633:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4001992-4002068:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4006112-4006250:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4007687-4007772:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4007860-4007951:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4009706-4009883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4012804-4012975:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4013547-4013690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4016878-4017109:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4017163-4017775:1:exon

Faf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Faf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAS-associated factor 2
translation: MAAPEERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEGVPSVFNPPPSRPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRFIRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKDRRMTVVGRLEGLIQPDDLINQLMFIMDANQTYLLSERLEREERNQTQVLRQQQDEAYLASLRADQEKERKKREERERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPESVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEELPNPPTLQEAGLSHTEVLFVQDLTDE
SIO_010081: Faf2
subclass of: SO_0000673
so part of: Faf2
location: join(3974855..3974917,3994559..3994627,3997499..3997633,4001992..4002068,4006112..4006250,4007687..4007772,4007860..4007951,4009706..4009883,4012804..4012975,4013547..4013690,4016878..4017060)
location: region:3974855-4017060:1
so has part: feature:3974855-3974917:1:exon
so has part: feature:3994559-3994627:1:exon
so has part: feature:3997499-3997633:1:exon
so has part: feature:4001992-4002068:1:exon
so has part: feature:4006112-4006250:1:exon
so has part: feature:4007687-4007772:1:exon
so has part: feature:4007860-4007951:1:exon
so has part: feature:4009706-4009883:1:exon
so has part: feature:4012804-4012975:1:exon
so has part: feature:4013547-4013690:1:exon
so has part: feature:4016878-4017060:1:exon

XP_048190345.1
type: Protein
SIO_000068: ncbiprotein

position:3974855:1
position: 3974855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4017060:1
position: 4017060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3974855-3974917:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3994559-3994627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3997499-3997633:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4001992-4002068:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4006112-4006250:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4007687-4007772:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4007860-4007951:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4009706-4009883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4012804-4012975:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4013547-4013690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4016878-4017060:1:exon

LOC125342258
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342258
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3994840..3994946)
location: region:3994840-3994946:-1
so has part: feature:3994840-3994946:-1:exon
subclass of: SO_0000623

125342258
type: Gene
SIO_000068: ncbigene

position:3994840:-1
position: 3994840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3994946:-1
position: 3994946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3994840-3994946:-1:exon

LOC125342258
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snRNA
gene: LOC125342258
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007209194.1
SIO_010081: LOC125342258
subclass of: SO_0000673
so part of: LOC125342258
location: complement(3994840..3994946)
location: region:3994840-3994946:-1
so has part: feature:3994840-3994946:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3994840-3994946:-1:exon

Rnf44
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Rnf44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4020593..4033772)
location: region:4020593-4033772:-1
so has part: feature:4020593-4033772:-1:exon
subclass of: SO_0000010

125342235
type: Gene
SIO_000068: ncbigene

position:4020593:-1
position: 4020593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4033772:-1
position: 4033772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4020593-4033772:-1:exon

Rnf44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rnf44
product: ring finger protein 44, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334389.1
SIO_010081: Rnf44
subclass of: SO_0000673
so part of: Rnf44
location: complement(join(4020593..4023061,4023545..4023644,4023738..4023859,4023958..4024045,4024220..4024350,4025073..4025234,4025331..4025507,4026487..4026654,4027010..4027199,4027343..4027493,4033494..4033772))
location: region:4020593-4033772:-1
so has part: feature:4033494-4033772:-1:exon
so has part: feature:4027343-4027493:-1:exon
so has part: feature:4027010-4027199:-1:exon
so has part: feature:4026487-4026654:-1:exon
so has part: feature:4025331-4025507:-1:exon
so has part: feature:4025073-4025234:-1:exon
so has part: feature:4024220-4024350:-1:exon
so has part: feature:4023958-4024045:-1:exon
so has part: feature:4023738-4023859:-1:exon
so has part: feature:4023545-4023644:-1:exon
so has part: feature:4020593-4023061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4033494-4033772:-1:exon

position:4033494:-1
position: 4033494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4027343-4027493:-1:exon

position:4027343:-1
position: 4027343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4027493:-1
position: 4027493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4027010-4027199:-1:exon

position:4027010:-1
position: 4027010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4027199:-1
position: 4027199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4026487-4026654:-1:exon

position:4026487:-1
position: 4026487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4026654:-1
position: 4026654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4025331-4025507:-1:exon

position:4025331:-1
position: 4025331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4025507:-1
position: 4025507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4025073-4025234:-1:exon

position:4025073:-1
position: 4025073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4025234:-1
position: 4025234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4024220-4024350:-1:exon

position:4024220:-1
position: 4024220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4024350:-1
position: 4024350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4023958-4024045:-1:exon

position:4023958:-1
position: 4023958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4024045:-1
position: 4024045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4023738-4023859:-1:exon

position:4023738:-1
position: 4023738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4023859:-1
position: 4023859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4023545-4023644:-1:exon

position:4023545:-1
position: 4023545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4023644:-1
position: 4023644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4020593-4023061:-1:exon

position:4023061:-1
position: 4023061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rnf44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rnf44
product: ring finger protein 44, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334394.1
SIO_010081: Rnf44
subclass of: SO_0000673
so part of: Rnf44
location: complement(join(4020593..4023061,4023545..4023644,4023738..4023859,4023958..4024045,4024220..4024350,4025073..4025234,4025331..4025495,4026487..4026654,4027010..4027199,4027343..4027493,4033494..4033771))
location: region:4020593-4033771:-1
so has part: feature:4033494-4033771:-1:exon
so has part: feature:4027343-4027493:-1:exon
so has part: feature:4027010-4027199:-1:exon
so has part: feature:4026487-4026654:-1:exon
so has part: feature:4025331-4025495:-1:exon
so has part: feature:4025073-4025234:-1:exon
so has part: feature:4024220-4024350:-1:exon
so has part: feature:4023958-4024045:-1:exon
so has part: feature:4023738-4023859:-1:exon
so has part: feature:4023545-4023644:-1:exon
so has part: feature:4020593-4023061:-1:exon

position:4033771:-1
position: 4033771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4033494-4033771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4027343-4027493:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4027010-4027199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4026487-4026654:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4025331-4025495:-1:exon

position:4025495:-1
position: 4025495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4025073-4025234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4024220-4024350:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4023958-4024045:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4023738-4023859:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4023545-4023644:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4020593-4023061:-1:exon

Rnf44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rnf44
product: ring finger protein 44, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334393.1
SIO_010081: Rnf44
subclass of: SO_0000673
so part of: Rnf44
location: complement(join(4020593..4023061,4023545..4023644,4023738..4023859,4023958..4024045,4024220..4024350,4025073..4025234,4025331..4025504,4026487..4026654,4027010..4027199,4027343..4027493,4033494..4033761))
location: region:4020593-4033761:-1
so has part: feature:4033494-4033761:-1:exon
so has part: feature:4027343-4027493:-1:exon
so has part: feature:4027010-4027199:-1:exon
so has part: feature:4026487-4026654:-1:exon
so has part: feature:4025331-4025504:-1:exon
so has part: feature:4025073-4025234:-1:exon
so has part: feature:4024220-4024350:-1:exon
so has part: feature:4023958-4024045:-1:exon
so has part: feature:4023738-4023859:-1:exon
so has part: feature:4023545-4023644:-1:exon
so has part: feature:4020593-4023061:-1:exon

position:4033761:-1
position: 4033761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4033494-4033761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4027343-4027493:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4027010-4027199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4026487-4026654:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4025331-4025504:-1:exon

position:4025504:-1
position: 4025504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4025073-4025234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4024220-4024350:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4023958-4024045:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4023738-4023859:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4023545-4023644:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4020593-4023061:-1:exon

Rnf44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rnf44
product: ring finger protein 44, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334390.1
SIO_010081: Rnf44
subclass of: SO_0000673
so part of: Rnf44
location: complement(join(4020593..4023061,4023545..4023644,4023738..4023859,4023958..4024045,4024220..4024350,4025073..4025234,4025331..4025507,4026487..4026654,4027010..4027199,4027343..4027493,4032686..4032901))
location: region:4020593-4032901:-1
so has part: feature:4032686-4032901:-1:exon
so has part: feature:4027343-4027493:-1:exon
so has part: feature:4027010-4027199:-1:exon
so has part: feature:4026487-4026654:-1:exon
so has part: feature:4025331-4025507:-1:exon
so has part: feature:4025073-4025234:-1:exon
so has part: feature:4024220-4024350:-1:exon
so has part: feature:4023958-4024045:-1:exon
so has part: feature:4023738-4023859:-1:exon
so has part: feature:4023545-4023644:-1:exon
so has part: feature:4020593-4023061:-1:exon

position:4032901:-1
position: 4032901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4032686-4032901:-1:exon

position:4032686:-1
position: 4032686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4027343-4027493:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4027010-4027199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4026487-4026654:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4025331-4025507:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4025073-4025234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4024220-4024350:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4023958-4024045:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4023738-4023859:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4023545-4023644:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4020593-4023061:-1:exon

Rnf44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rnf44
product: ring finger protein 44, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334392.1
SIO_010081: Rnf44
subclass of: SO_0000673
so part of: Rnf44
location: complement(join(4020593..4023061,4023545..4023644,4023738..4023859,4023958..4024045,4024220..4024350,4025073..4025234,4025331..4025507,4026487..4026654,4027010..4027199,4027343..4027493,4032000..4032014))
location: region:4020593-4032014:-1
so has part: feature:4032000-4032014:-1:exon
so has part: feature:4027343-4027493:-1:exon
so has part: feature:4027010-4027199:-1:exon
so has part: feature:4026487-4026654:-1:exon
so has part: feature:4025331-4025507:-1:exon
so has part: feature:4025073-4025234:-1:exon
so has part: feature:4024220-4024350:-1:exon
so has part: feature:4023958-4024045:-1:exon
so has part: feature:4023738-4023859:-1:exon
so has part: feature:4023545-4023644:-1:exon
so has part: feature:4020593-4023061:-1:exon

position:4032014:-1
position: 4032014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4032000-4032014:-1:exon

position:4032000:-1
position: 4032000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4027343-4027493:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4027010-4027199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4026487-4026654:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4025331-4025507:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4025073-4025234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4024220-4024350:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4023958-4024045:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4023738-4023859:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4023545-4023644:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4020593-4023061:-1:exon

Rnf44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rnf44
product: ring finger protein 44, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334391.1
SIO_010081: Rnf44
subclass of: SO_0000673
so part of: Rnf44
location: complement(join(4020593..4023061,4023545..4023644,4023738..4023859,4023958..4024045,4024220..4024350,4025073..4025234,4025331..4025507,4026487..4026654,4027010..4027199,4027343..4027788))
location: region:4020593-4027788:-1
so has part: feature:4027343-4027788:-1:exon
so has part: feature:4027010-4027199:-1:exon
so has part: feature:4026487-4026654:-1:exon
so has part: feature:4025331-4025507:-1:exon
so has part: feature:4025073-4025234:-1:exon
so has part: feature:4024220-4024350:-1:exon
so has part: feature:4023958-4024045:-1:exon
so has part: feature:4023738-4023859:-1:exon
so has part: feature:4023545-4023644:-1:exon
so has part: feature:4020593-4023061:-1:exon

position:4027788:-1
position: 4027788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4027343-4027788:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4027010-4027199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4026487-4026654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4025331-4025507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4025073-4025234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024220-4024350:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4023958-4024045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4023738-4023859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4023545-4023644:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4020593-4023061:-1:exon

Rnf44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rnf44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X3
translation: MRPWALAVTRWPPSAPAAQRRFSAGPSSTPGQLWGSLGRQGPLASPPAQDESLPSQQPLPRLPHLPVEERRASAPAGGSPRMLHQAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPAGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPACTMQQLPVSYQAYPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDMDLRGDQHPLGSFTYPTSAPGPALSPSVPLNYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPPPPSYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDMEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: Rnf44
subclass of: SO_0000673
so part of: Rnf44
location: complement(join(4022999..4023061,4023545..4023644,4023738..4023859,4023958..4024045,4024220..4024350,4025073..4025234,4025331..4025495,4026487..4026654,4027010..4027199,4027343..4027449))
location: region:4022999-4027449:-1
so has part: feature:4027343-4027449:-1:exon
so has part: feature:4027010-4027199:-1:exon
so has part: feature:4026487-4026654:-1:exon
so has part: feature:4025331-4025495:-1:exon
so has part: feature:4025073-4025234:-1:exon
so has part: feature:4024220-4024350:-1:exon
so has part: feature:4023958-4024045:-1:exon
so has part: feature:4023738-4023859:-1:exon
so has part: feature:4023545-4023644:-1:exon
so has part: feature:4022999-4023061:-1:exon

XP_048190351.1
type: Protein
SIO_000068: ncbiprotein

position:4022999:-1
position: 4022999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4027449:-1
position: 4027449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4027343-4027449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4027010-4027199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4026487-4026654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4025331-4025495:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4025073-4025234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024220-4024350:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4023958-4024045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4023738-4023859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4023545-4023644:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4022999-4023061:-1:exon

Rnf44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rnf44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X2
translation: MRPWALAVTRWPPSAPAAQRRFSAGPSSTPGQLWGSLGRQGPLASPPAQDESLPSQQPLPRLPHLPVEERRASAPAGGSPRMLHQAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPAGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVSYQAYPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDMDLRGDQHPLGSFTYPTSAPGPALSPSVPLNYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPPPPSYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDMEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: Rnf44
subclass of: SO_0000673
so part of: Rnf44
location: complement(join(4022999..4023061,4023545..4023644,4023738..4023859,4023958..4024045,4024220..4024350,4025073..4025234,4025331..4025504,4026487..4026654,4027010..4027199,4027343..4027449))
location: region:4022999-4027449:-1
so has part: feature:4027343-4027449:-1:exon
so has part: feature:4027010-4027199:-1:exon
so has part: feature:4026487-4026654:-1:exon
so has part: feature:4025331-4025504:-1:exon
so has part: feature:4025073-4025234:-1:exon
so has part: feature:4024220-4024350:-1:exon
so has part: feature:4023958-4024045:-1:exon
so has part: feature:4023738-4023859:-1:exon
so has part: feature:4023545-4023644:-1:exon
so has part: feature:4022999-4023061:-1:exon

XP_048190350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4027343-4027449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4027010-4027199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4026487-4026654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4025331-4025504:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4025073-4025234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024220-4024350:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4023958-4024045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4023738-4023859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4023545-4023644:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4022999-4023061:-1:exon

Rnf44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rnf44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X1
translation: MRPWALAVTRWPPSAPAAQRRFSAGPSSTPGQLWGSLGRQGPLASPPAQDESLPSQQPLPRLPHLPVEERRASAPAGGSPRMLHQAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPAGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPQLIQACTMQQLPVSYQAYPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDMDLRGDQHPLGSFTYPTSAPGPALSPSVPLNYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPPPPSYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDMEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: Rnf44
subclass of: SO_0000673
so part of: Rnf44
location: complement(join(4022999..4023061,4023545..4023644,4023738..4023859,4023958..4024045,4024220..4024350,4025073..4025234,4025331..4025507,4026487..4026654,4027010..4027199,4027343..4027449))
location: region:4022999-4027449:-1
so has part: feature:4027343-4027449:-1:exon
so has part: feature:4027010-4027199:-1:exon
so has part: feature:4026487-4026654:-1:exon
so has part: feature:4025331-4025507:-1:exon
so has part: feature:4025073-4025234:-1:exon
so has part: feature:4024220-4024350:-1:exon
so has part: feature:4023958-4024045:-1:exon
so has part: feature:4023738-4023859:-1:exon
so has part: feature:4023545-4023644:-1:exon
so has part: feature:4022999-4023061:-1:exon

XP_048190346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4027343-4027449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4027010-4027199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4026487-4026654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4025331-4025507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4025073-4025234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024220-4024350:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4023958-4024045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4023738-4023859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4023545-4023644:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4022999-4023061:-1:exon

Rnf44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rnf44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X1
translation: MRPWALAVTRWPPSAPAAQRRFSAGPSSTPGQLWGSLGRQGPLASPPAQDESLPSQQPLPRLPHLPVEERRASAPAGGSPRMLHQAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPAGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPQLIQACTMQQLPVSYQAYPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDMDLRGDQHPLGSFTYPTSAPGPALSPSVPLNYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPPPPSYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDMEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: Rnf44
subclass of: SO_0000673
so part of: Rnf44
location: complement(join(4022999..4023061,4023545..4023644,4023738..4023859,4023958..4024045,4024220..4024350,4025073..4025234,4025331..4025507,4026487..4026654,4027010..4027199,4027343..4027449))
location: region:4022999-4027449:-1
so has part: feature:4027343-4027449:-1:exon
so has part: feature:4027010-4027199:-1:exon
so has part: feature:4026487-4026654:-1:exon
so has part: feature:4025331-4025507:-1:exon
so has part: feature:4025073-4025234:-1:exon
so has part: feature:4024220-4024350:-1:exon
so has part: feature:4023958-4024045:-1:exon
so has part: feature:4023738-4023859:-1:exon
so has part: feature:4023545-4023644:-1:exon
so has part: feature:4022999-4023061:-1:exon

XP_048190347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4027343-4027449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4027010-4027199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4026487-4026654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4025331-4025507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4025073-4025234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024220-4024350:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4023958-4024045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4023738-4023859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4023545-4023644:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4022999-4023061:-1:exon

Rnf44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rnf44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X1
translation: MRPWALAVTRWPPSAPAAQRRFSAGPSSTPGQLWGSLGRQGPLASPPAQDESLPSQQPLPRLPHLPVEERRASAPAGGSPRMLHQAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPAGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPQLIQACTMQQLPVSYQAYPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDMDLRGDQHPLGSFTYPTSAPGPALSPSVPLNYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPPPPSYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDMEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: Rnf44
subclass of: SO_0000673
so part of: Rnf44
location: complement(join(4022999..4023061,4023545..4023644,4023738..4023859,4023958..4024045,4024220..4024350,4025073..4025234,4025331..4025507,4026487..4026654,4027010..4027199,4027343..4027449))
location: region:4022999-4027449:-1
so has part: feature:4027343-4027449:-1:exon
so has part: feature:4027010-4027199:-1:exon
so has part: feature:4026487-4026654:-1:exon
so has part: feature:4025331-4025507:-1:exon
so has part: feature:4025073-4025234:-1:exon
so has part: feature:4024220-4024350:-1:exon
so has part: feature:4023958-4024045:-1:exon
so has part: feature:4023738-4023859:-1:exon
so has part: feature:4023545-4023644:-1:exon
so has part: feature:4022999-4023061:-1:exon

XP_048190348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4027343-4027449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4027010-4027199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4026487-4026654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4025331-4025507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4025073-4025234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024220-4024350:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4023958-4024045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4023738-4023859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4023545-4023644:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4022999-4023061:-1:exon

Rnf44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rnf44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X1
translation: MRPWALAVTRWPPSAPAAQRRFSAGPSSTPGQLWGSLGRQGPLASPPAQDESLPSQQPLPRLPHLPVEERRASAPAGGSPRMLHQAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPAGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPQLIQACTMQQLPVSYQAYPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDMDLRGDQHPLGSFTYPTSAPGPALSPSVPLNYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPPPPSYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDMEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: Rnf44
subclass of: SO_0000673
so part of: Rnf44
location: complement(join(4022999..4023061,4023545..4023644,4023738..4023859,4023958..4024045,4024220..4024350,4025073..4025234,4025331..4025507,4026487..4026654,4027010..4027199,4027343..4027449))
location: region:4022999-4027449:-1
so has part: feature:4027343-4027449:-1:exon
so has part: feature:4027010-4027199:-1:exon
so has part: feature:4026487-4026654:-1:exon
so has part: feature:4025331-4025507:-1:exon
so has part: feature:4025073-4025234:-1:exon
so has part: feature:4024220-4024350:-1:exon
so has part: feature:4023958-4024045:-1:exon
so has part: feature:4023738-4023859:-1:exon
so has part: feature:4023545-4023644:-1:exon
so has part: feature:4022999-4023061:-1:exon

XP_048190349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4027343-4027449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4027010-4027199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4026487-4026654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4025331-4025507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4025073-4025234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024220-4024350:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4023958-4024045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4023738-4023859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4023545-4023644:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4022999-4023061:-1:exon

Cdhr2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Cdhr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4045443..4070904
location: region:4045443-4070904:1
so has part: feature:4045443-4070904:1:exon
subclass of: SO_0000010

125342232
type: Gene
SIO_000068: ncbigene

position:4045443:1
position: 4045443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4070904:1
position: 4070904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4045443-4070904:1:exon

Cdhr2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cdhr2
product: cadherin related family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048334387.1
SIO_010081: Cdhr2
subclass of: SO_0000673
so part of: Cdhr2
location: join(4045443..4045539,4049608..4049668,4050219..4050293,4051324..4051463,4051658..4051711,4052221..4052310,4052985..4053074,4054081..4054206,4054304..4054450,4054544..4054619,4054878..4055002,4055085..4055318,4055869..4056024,4056325..4056486,4056692..4056753,4057287..4057530,4058738..4058977,4059612..4059681,4060674..4061279,4062579..4062650,4063271..4063320,4064904..4065055,4065458..4065566,4065674..4065762,4066099..4066167,4066253..4066330,4066446..4066506,4066784..4066908,4067210..4067323,4067402..4067476,4067743..4067800,4070712..4070904)
location: region:4045443-4070904:1
so has part: feature:4045443-4045539:1:exon
so has part: feature:4049608-4049668:1:exon
so has part: feature:4050219-4050293:1:exon
so has part: feature:4051324-4051463:1:exon
so has part: feature:4051658-4051711:1:exon
so has part: feature:4052221-4052310:1:exon
so has part: feature:4052985-4053074:1:exon
so has part: feature:4054081-4054206:1:exon
so has part: feature:4054304-4054450:1:exon
so has part: feature:4054544-4054619:1:exon
so has part: feature:4054878-4055002:1:exon
so has part: feature:4055085-4055318:1:exon
so has part: feature:4055869-4056024:1:exon
so has part: feature:4056325-4056486:1:exon
so has part: feature:4056692-4056753:1:exon
so has part: feature:4057287-4057530:1:exon
so has part: feature:4058738-4058977:1:exon
so has part: feature:4059612-4059681:1:exon
so has part: feature:4060674-4061279:1:exon
so has part: feature:4062579-4062650:1:exon
so has part: feature:4063271-4063320:1:exon
so has part: feature:4064904-4065055:1:exon
so has part: feature:4065458-4065566:1:exon
so has part: feature:4065674-4065762:1:exon
so has part: feature:4066099-4066167:1:exon
so has part: feature:4066253-4066330:1:exon
so has part: feature:4066446-4066506:1:exon
so has part: feature:4066784-4066908:1:exon
so has part: feature:4067210-4067323:1:exon
so has part: feature:4067402-4067476:1:exon
so has part: feature:4067743-4067800:1:exon
so has part: feature:4070712-4070904:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4045443-4045539:1:exon

position:4045539:1
position: 4045539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4049608-4049668:1:exon

position:4049608:1
position: 4049608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4049668:1
position: 4049668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4050219-4050293:1:exon

position:4050219:1
position: 4050219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4050293:1
position: 4050293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4051324-4051463:1:exon

position:4051324:1
position: 4051324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4051463:1
position: 4051463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4051658-4051711:1:exon

position:4051658:1
position: 4051658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4051711:1
position: 4051711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4052221-4052310:1:exon

position:4052221:1
position: 4052221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4052310:1
position: 4052310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4052985-4053074:1:exon

position:4052985:1
position: 4052985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4053074:1
position: 4053074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4054081-4054206:1:exon

position:4054081:1
position: 4054081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4054206:1
position: 4054206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4054304-4054450:1:exon

position:4054304:1
position: 4054304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4054450:1
position: 4054450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4054544-4054619:1:exon

position:4054544:1
position: 4054544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4054619:1
position: 4054619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4054878-4055002:1:exon

position:4054878:1
position: 4054878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4055002:1
position: 4055002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4055085-4055318:1:exon

position:4055085:1
position: 4055085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4055318:1
position: 4055318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4055869-4056024:1:exon

position:4055869:1
position: 4055869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4056024:1
position: 4056024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4056325-4056486:1:exon

position:4056325:1
position: 4056325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4056486:1
position: 4056486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4056692-4056753:1:exon

position:4056692:1
position: 4056692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4056753:1
position: 4056753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4057287-4057530:1:exon

position:4057287:1
position: 4057287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4057530:1
position: 4057530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4058738-4058977:1:exon

position:4058738:1
position: 4058738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4058977:1
position: 4058977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4059612-4059681:1:exon

position:4059612:1
position: 4059612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4059681:1
position: 4059681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4060674-4061279:1:exon

position:4060674:1
position: 4060674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4061279:1
position: 4061279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4062579-4062650:1:exon

position:4062579:1
position: 4062579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4062650:1
position: 4062650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4063271-4063320:1:exon

position:4063271:1
position: 4063271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4063320:1
position: 4063320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4064904-4065055:1:exon

position:4064904:1
position: 4064904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4065055:1
position: 4065055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4065458-4065566:1:exon

position:4065458:1
position: 4065458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4065566:1
position: 4065566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4065674-4065762:1:exon

position:4065674:1
position: 4065674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4065762:1
position: 4065762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4066099-4066167:1:exon

position:4066099:1
position: 4066099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4066167:1
position: 4066167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4066253-4066330:1:exon

position:4066253:1
position: 4066253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4066330:1
position: 4066330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4066446-4066506:1:exon

position:4066446:1
position: 4066446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4066506:1
position: 4066506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4066784-4066908:1:exon

position:4066784:1
position: 4066784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4066908:1
position: 4066908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4067210-4067323:1:exon

position:4067210:1
position: 4067210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4067323:1
position: 4067323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:4067402-4067476:1:exon

position:4067402:1
position: 4067402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4067476:1
position: 4067476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:4067743-4067800:1:exon

position:4067743:1
position: 4067743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4067800:1
position: 4067800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:4070712-4070904:1:exon

position:4070712:1
position: 4070712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cdhr2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cdhr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-related family member 2
translation: MARLWLPCFLLPALLGSATANTPPEFLKNMSFVVQLPEDLAVGAEAFWVLARDIDNDPLTYAISGTDHTFFSINSTTGEVTVASPLDFETDSYLMINVSVSDSHNKPIQRTMTVILEDRNDNVPVFKTTNLSTNISETLPVGSLVFSVLAEDKDSGPAGVVNYYIEKVIPNTVENQHLFQILDNGSIILNGSLSYNNKSSFYQLELKACDLGGILYNEPITQCSQPVFLSVSVVDESDLDPQFVRDFYSASVSEDAAVGTSVLAVEAVDGDKGVNNKLNYSISNSTKFDWFDIQTERGVGIIKVKNILDREQLLQENEEVQVQVTATEVHPNIYGQEAKASIWVTIRVLDVNDHKPEFYNCSLENCSFTSNEAQDNFSGWVEEHAAARIPIEGLTMVAYDPDKGSNGTFELSLKGPDAPAFSVSPARAAGSADIQVLVKDSNMVDYERKTVIVVQVVATDLVSRNSSVASVTIHLRDINDHRPTFPKNLYIIEVPECSPTGFVVTNSTVATDPDTGEWGRITYSLLPGNGVDLFEVDPHTGTVTVRNGTALDRERQAVYYLTLQATDGGNQSSTTMLEVHLLDINDNAPEVTGSYNIFVQEGKGNVSVAIQAHDNDQPDTNNSLLVFSLLPGPYSHNFSLNPNTGLLTNLGPLDREAIDPALEGRIVLTVRVSDCGVPPLSTDVNITITVEDINDNQPIFNQSSYQFLVREQDPGVWVGTVEAWDADQTEANNRISFSLSGDGSNNFLLQSSVLESGRAEGRLWLPPGVSLDYETQDFFKLIVTAENLGPQGLEATAEVNVSVVDVNDTPPTLVAASLRAIKVAENGSQHGQVAEIKAQDVDSEAQLEIELMNVICTKAGVDVGSLCHGWFWVAANGSVYINQSKAIDYEACNLVTLVVRAWDRNTDPRFEAFSDNGSLPITIEDVNDNAPYFLPDNKTFVIIPELVIPNQQVASVQAKDEDSGDNAAIVFSILGVDFISKDGTTTPFSNFFQISTTSEAGVFTGSIKLVTSLDSTLQGTYQVTVQAQDHILDSVALKTQITLNLFTVDQSYRVRLQFSTSKEEVGANVNDIKAALAQATRTSVYVVNIQDVNTAARAQALSYLDAYFVFPNGTALTLNELSVIIRRDQDALTQLLNMGLVVLGSQESVESDQPQVLSSAIIGLAVALVLVLVIMIVTLVCVRKSYHRKLRAIKAGNEARRAAVGEAPSAPTIPGTNVYNAERANPMLGLPTKELEYVSSSSDQDYVSLNSLDENSVDLDKDKQDAKKQPQHSPPELDPEPLSVVLAERKVGTNGPQQEVMCFNNAGLDTTDL
SIO_010081: Cdhr2
subclass of: SO_0000673
so part of: Cdhr2
location: join(4049617..4049668,4050219..4050293,4051324..4051463,4051658..4051711,4052221..4052310,4052985..4053074,4054081..4054206,4054304..4054450,4054544..4054619,4054878..4055002,4055085..4055318,4055869..4056024,4056325..4056486,4056692..4056753,4057287..4057530,4058738..4058977,4059612..4059681,4060674..4061279,4062579..4062650,4063271..4063320,4064904..4065055,4065458..4065566,4065674..4065762,4066099..4066167,4066253..4066330,4066446..4066506,4066784..4066908,4067210..4067323,4067402..4067476,4067743..4067800,4070712..4070852)
location: region:4049617-4070852:1
so has part: feature:4049617-4049668:1:exon
so has part: feature:4050219-4050293:1:exon
so has part: feature:4051324-4051463:1:exon
so has part: feature:4051658-4051711:1:exon
so has part: feature:4052221-4052310:1:exon
so has part: feature:4052985-4053074:1:exon
so has part: feature:4054081-4054206:1:exon
so has part: feature:4054304-4054450:1:exon
so has part: feature:4054544-4054619:1:exon
so has part: feature:4054878-4055002:1:exon
so has part: feature:4055085-4055318:1:exon
so has part: feature:4055869-4056024:1:exon
so has part: feature:4056325-4056486:1:exon
so has part: feature:4056692-4056753:1:exon
so has part: feature:4057287-4057530:1:exon
so has part: feature:4058738-4058977:1:exon
so has part: feature:4059612-4059681:1:exon
so has part: feature:4060674-4061279:1:exon
so has part: feature:4062579-4062650:1:exon
so has part: feature:4063271-4063320:1:exon
so has part: feature:4064904-4065055:1:exon
so has part: feature:4065458-4065566:1:exon
so has part: feature:4065674-4065762:1:exon
so has part: feature:4066099-4066167:1:exon
so has part: feature:4066253-4066330:1:exon
so has part: feature:4066446-4066506:1:exon
so has part: feature:4066784-4066908:1:exon
so has part: feature:4067210-4067323:1:exon
so has part: feature:4067402-4067476:1:exon
so has part: feature:4067743-4067800:1:exon
so has part: feature:4070712-4070852:1:exon

XP_048190344.1
type: Protein
SIO_000068: ncbiprotein

position:4049617:1
position: 4049617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4070852:1
position: 4070852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4049617-4049668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4050219-4050293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4051324-4051463:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4051658-4051711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4052221-4052310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4052985-4053074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4054081-4054206:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4054304-4054450:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4054544-4054619:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4054878-4055002:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4055085-4055318:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4055869-4056024:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4056325-4056486:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4056692-4056753:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4057287-4057530:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4058738-4058977:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4059612-4059681:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4060674-4061279:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4062579-4062650:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4063271-4063320:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4064904-4065055:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4065458-4065566:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4065674-4065762:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4066099-4066167:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4066253-4066330:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4066446-4066506:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4066784-4066908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4067210-4067323:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4067402-4067476:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4067743-4067800:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4070712-4070852:1:exon

Gprin1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Gprin1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4071912..4074785)
location: region:4071912-4074785:-1
so has part: feature:4071912-4074785:-1:exon
subclass of: SO_0000010

125341771
type: Gene
SIO_000068: ncbigene

position:4071912:-1
position: 4071912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4074785:-1
position: 4074785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4071912-4074785:-1:exon

Gprin1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Gprin1
product: G protein regulated inducer of neurite outgrowth 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048333865.1
SIO_010081: Gprin1
subclass of: SO_0000673
so part of: Gprin1
location: complement(4071912..4074785)
location: region:4071912-4074785:-1
so has part: feature:4071912-4074785:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4071912-4074785:-1:exon

Gprin1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Gprin1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-regulated inducer of neurite outgrowth 1
translation: MDSSKDPACLQLLHSDSSLRGSLNCLQDGRSLGTGHPAMRDHCSSQQKPSPALPRETPDQSPAMDLRHSGPSGAEEGASCTEGPSGSLSCPSSTCTPPSAPSTKETLGAQGALLSGTIEITLSGKPEPKSPGSLAPTSSENRNPTLLEKTDSKSSLQAGPASAGKEEAGSSKAEPLLTEKRGPAVSNPGDVGAPGRMGPPNPGKEDPESVRKADPTCTSKVALVSPGQEDPGSLQKVGPVFPSKEEPKPPKSSEKVVPAPTAKEDFVFSGKQDPGPPGKANPASLESTKHTSTGKTEDSELSEKLEPISSGIGDPGAPRGVDTAHLGAVGPTSLGNAEKEDGESLGKAGTASSGGGPGPVRMTEGMAAVQVDPGPGKMDPTSVKSRGSGPSSEPGAVSLGKVGLVCPGKPEPSSPGQAEERGSVGKTGTSEPLGKADPEFSRSAESTAALGNVSTSSSGKANRESLGRDDLVSSSPGDPDPPGTRGPPYAVENAPGTGGKAESQPEAGPLASGKVDAAHSGDLMATGKPAVTPKEKMDPGMALETKGNPVSSAEAETEASRGTKPKPGHQPQAVQDPGQEGTAPSGAAETQAPPSEQSQASGKADPTSSSGNAQPSASWIAEPRALGKAGFASETPALATAAPLTPEKPSPCPSPRSAAQACSPTLAPTGTAQGSGVPAAPEPVRSPQAASSRGSTDLVGSGPRPEAAAPPSGPRTRDNFTKAPSWDAGGPPAPLPPAREDAGTQAGARACVSVAVSPMSPQDGAGAPAFSFQGTPRAPSPAPGPPSRRDAGLQVSLGTAETRSVATGPMTPQAAAPPSAPPVFPEVRVRPGSALAAALAPQEAAEPVRDVKWDEKGMTWEVYGASMEVEVLGMAIQKHLERQIEEHGRQGGPAPPVAATATTTATTTAARAGPGRAGSVRTAPPEAEAKRPPGLFRALLQSVRRPRCCSRAGPTAE
SIO_010081: Gprin1
subclass of: SO_0000673
so part of: Gprin1
location: complement(4071912..4074785)
location: region:4071912-4074785:-1
so has part: feature:4071912-4074785:-1:exon

XP_048189822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4071912-4074785:-1:exon

Sncb
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Sncb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4095166..4103731)
location: region:4095166-4103731:-1
so has part: feature:4095166-4103731:-1:exon
subclass of: SO_0000010

125342061
type: Gene
SIO_000068: ncbigene

position:4095166:-1
position: 4095166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4103731:-1
position: 4103731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4095166-4103731:-1:exon

Sncb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sncb
product: synuclein beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334194.1
SIO_010081: Sncb
subclass of: SO_0000673
so part of: Sncb
location: complement(join(4095166..4095224,4095573..4095662,4098947..4099065,4099221..4099262,4103017..4103146,4103694..4103731))
location: region:4095166-4103731:-1
so has part: feature:4103694-4103731:-1:exon
so has part: feature:4103017-4103146:-1:exon
so has part: feature:4099221-4099262:-1:exon
so has part: feature:4098947-4099065:-1:exon
so has part: feature:4095573-4095662:-1:exon
so has part: feature:4095166-4095224:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4103694-4103731:-1:exon

position:4103694:-1
position: 4103694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4103017-4103146:-1:exon

position:4103017:-1
position: 4103017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4103146:-1
position: 4103146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4099221-4099262:-1:exon

position:4099221:-1
position: 4099221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4099262:-1
position: 4099262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4098947-4099065:-1:exon

position:4098947:-1
position: 4098947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4099065:-1
position: 4099065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4095573-4095662:-1:exon

position:4095573:-1
position: 4095573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4095662:-1
position: 4095662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4095166-4095224:-1:exon

position:4095224:-1
position: 4095224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sncb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sncb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-synuclein
translation: MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKTREGVVQGVASVAEKTKEQASHLGGAVFSGAGNIAAATGLVKKEEFPTDLKPEEVGQEAGEEPLIEPLMEPEGESYEEPPQEEYQEYEPEA
SIO_010081: Sncb
subclass of: SO_0000673
so part of: Sncb
location: complement(join(4095192..4095224,4095573..4095662,4098947..4099065,4099221..4099262,4103017..4103137))
location: region:4095192-4103137:-1
so has part: feature:4103017-4103137:-1:exon
so has part: feature:4099221-4099262:-1:exon
so has part: feature:4098947-4099065:-1:exon
so has part: feature:4095573-4095662:-1:exon
so has part: feature:4095192-4095224:-1:exon

XP_048190151.1
type: Protein
SIO_000068: ncbiprotein

position:4095192:-1
position: 4095192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4103137:-1
position: 4103137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4103017-4103137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4099221-4099262:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4098947-4099065:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4095573-4095662:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4095192-4095224:-1:exon

Eif4e1b
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Eif4e1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4108190..4112375
location: region:4108190-4112375:1
so has part: feature:4108190-4112375:1:exon
subclass of: SO_0000010

125341772
type: Gene
SIO_000068: ncbigene

position:4108190:1
position: 4108190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4112375:1
position: 4112375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4108190-4112375:1:exon

Eif4e1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Eif4e1b
product: eukaryotic translation initiation factor 4E family member 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048333866.1
SIO_010081: Eif4e1b
subclass of: SO_0000673
so part of: Eif4e1b
location: join(4108190..4108284,4108538..4108597,4108849..4108944,4110088..4110151,4110928..4111041,4111160..4111299,4112220..4112375)
location: region:4108190-4112375:1
so has part: feature:4108190-4108284:1:exon
so has part: feature:4108538-4108597:1:exon
so has part: feature:4108849-4108944:1:exon
so has part: feature:4110088-4110151:1:exon
so has part: feature:4110928-4111041:1:exon
so has part: feature:4111160-4111299:1:exon
so has part: feature:4112220-4112375:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4108190-4108284:1:exon

position:4108284:1
position: 4108284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4108538-4108597:1:exon

position:4108538:1
position: 4108538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4108597:1
position: 4108597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4108849-4108944:1:exon

position:4108849:1
position: 4108849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4108944:1
position: 4108944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4110088-4110151:1:exon

position:4110088:1
position: 4110088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4110151:1
position: 4110151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4110928-4111041:1:exon

position:4110928:1
position: 4110928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4111041:1
position: 4111041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4111160-4111299:1:exon

position:4111160:1
position: 4111160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4111299:1
position: 4111299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4112220-4112375:1:exon

position:4112220:1
position: 4112220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Eif4e1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Eif4e1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4E type 1B
translation: MRTEVQVKSQQLPALTAAFWEAGALAWLPPALKARGESLAEVKLDLHPLQNRWVLWFFKNDCGRAWQDNLHQVTTIDTVEDFWGMYSHIQLASKLSPGCDYALFKDGIEPMWEDSRNKRGGRWLVSLAKQQRHSELDRLWLETLLCLIGDSFEEHSREVCGAVINIRPKGDKIAVWTSNAENQAGVLHIGQVYKERLGLSMKTIIGYQAHTDTASKSNSLAKNKFVV
SIO_010081: Eif4e1b
subclass of: SO_0000673
so part of: Eif4e1b
location: join(4108190..4108284,4108538..4108597,4108849..4108944,4110088..4110151,4110928..4111041,4111160..4111299,4112220..4112334)
location: region:4108190-4112334:1
so has part: feature:4108190-4108284:1:exon
so has part: feature:4108538-4108597:1:exon
so has part: feature:4108849-4108944:1:exon
so has part: feature:4110088-4110151:1:exon
so has part: feature:4110928-4111041:1:exon
so has part: feature:4111160-4111299:1:exon
so has part: feature:4112220-4112334:1:exon

XP_048189823.1
type: Protein
SIO_000068: ncbiprotein

position:4112334:1
position: 4112334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4108190-4108284:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4108538-4108597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4108849-4108944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4110088-4110151:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4110928-4111041:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4111160-4111299:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4112220-4112334:1:exon

Tspan17
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tspan17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4115252..4122070
location: region:4115252-4122070:1
so has part: feature:4115252-4122070:1:exon
subclass of: SO_0000010

125341921
type: Gene
SIO_000068: ncbigene

position:4115252:1
position: 4115252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4122070:1
position: 4122070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4115252-4122070:1:exon

Tspan17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tspan17
product: tetraspanin 17, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048334049.1
SIO_010081: Tspan17
subclass of: SO_0000673
so part of: Tspan17
location: join(4115252..4115498,4117043..4117093,4117186..4117332,4118568..4118738,4119443..4119568,4120603..4120650,4121207..4121323,4121844..4122070)
location: region:4115252-4122070:1
so has part: feature:4115252-4115498:1:exon
so has part: feature:4117043-4117093:1:exon
so has part: feature:4117186-4117332:1:exon
so has part: feature:4118568-4118738:1:exon
so has part: feature:4119443-4119568:1:exon
so has part: feature:4120603-4120650:1:exon
so has part: feature:4121207-4121323:1:exon
so has part: feature:4121844-4122070:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4115252-4115498:1:exon

position:4115498:1
position: 4115498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4117043-4117093:1:exon

position:4117043:1
position: 4117043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4117093:1
position: 4117093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4117186-4117332:1:exon

position:4117186:1
position: 4117186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4117332:1
position: 4117332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4118568-4118738:1:exon

position:4118568:1
position: 4118568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4118738:1
position: 4118738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4119443-4119568:1:exon

position:4119443:1
position: 4119443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4119568:1
position: 4119568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4120603-4120650:1:exon

position:4120603:1
position: 4120603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4120650:1
position: 4120650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4121207-4121323:1:exon

position:4121207:1
position: 4121207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4121323:1
position: 4121323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4121844-4122070:1:exon

position:4121844:1
position: 4121844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tspan17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tspan17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-17 isoform X2
translation: MPAKHQHFQEPAVGCCGKYFLFGFNVVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSIFLGLIFFLELATGILAFIFKDWIRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPSDWNLNIYFNCTDLNPSRERCGVPFSCCVKDPAEDVLNTQCGYDVRLKLELEQQGFIYTKGCVGQFEKWLQDNLILVAGVFLGIALLQIFGICLAQNLVSDIRAVKANW
SIO_010081: Tspan17
subclass of: SO_0000673
so part of: Tspan17
location: join(4115412..4115498,4117043..4117093,4117186..4117332,4118568..4118738,4119443..4119568,4120603..4120650,4121207..4121323,4121844..4121909)
location: region:4115412-4121909:1
so has part: feature:4115412-4115498:1:exon
so has part: feature:4117043-4117093:1:exon
so has part: feature:4117186-4117332:1:exon
so has part: feature:4118568-4118738:1:exon
so has part: feature:4119443-4119568:1:exon
so has part: feature:4120603-4120650:1:exon
so has part: feature:4121207-4121323:1:exon
so has part: feature:4121844-4121909:1:exon

XP_048190006.1
type: Protein
SIO_000068: ncbiprotein

position:4115412:1
position: 4115412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4121909:1
position: 4121909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4115412-4115498:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4117043-4117093:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4117186-4117332:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4118568-4118738:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4119443-4119568:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4120603-4120650:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4121207-4121323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4121844-4121909:1:exon

Tspan17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tspan17
product: tetraspanin 17, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048334048.1
SIO_010081: Tspan17
subclass of: SO_0000673
so part of: Tspan17
location: join(4116889..4117093,4117186..4117332,4118568..4118738,4119443..4119568,4120603..4120650,4121207..4121323,4121844..4122070)
location: region:4116889-4122070:1
so has part: feature:4116889-4117093:1:exon
so has part: feature:4117186-4117332:1:exon
so has part: feature:4118568-4118738:1:exon
so has part: feature:4119443-4119568:1:exon
so has part: feature:4120603-4120650:1:exon
so has part: feature:4121207-4121323:1:exon
so has part: feature:4121844-4122070:1:exon

position:4116889:1
position: 4116889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4116889-4117093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4117186-4117332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4118568-4118738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4119443-4119568:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4120603-4120650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4121207-4121323:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4121844-4122070:1:exon

Tspan17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tspan17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-17 isoform X1
translation: MSLEAGQGTWSHSLAACVPHLPEDPRVPGKGKGRGVLVLWSLLQLLQVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSIFLGLIFFLELATGILAFIFKDWIRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPSDWNLNIYFNCTDLNPSRERCGVPFSCCVKDPAEDVLNTQCGYDVRLKLELEQQGFIYTKGCVGQFEKWLQDNLILVAGVFLGIALLQIFGICLAQNLVSDIRAVKANW
SIO_010081: Tspan17
subclass of: SO_0000673
so part of: Tspan17
location: join(4116902..4117093,4117186..4117332,4118568..4118738,4119443..4119568,4120603..4120650,4121207..4121323,4121844..4121909)
location: region:4116902-4121909:1
so has part: feature:4116902-4117093:1:exon
so has part: feature:4117186-4117332:1:exon
so has part: feature:4118568-4118738:1:exon
so has part: feature:4119443-4119568:1:exon
so has part: feature:4120603-4120650:1:exon
so has part: feature:4121207-4121323:1:exon
so has part: feature:4121844-4121909:1:exon

XP_048190005.1
type: Protein
SIO_000068: ncbiprotein

position:4116902:1
position: 4116902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4116902-4117093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4117186-4117332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4118568-4118738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4119443-4119568:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4120603-4120650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4121207-4121323:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4121844-4121909:1:exon

LOC125341773
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125341773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4192785..4193703)
location: region:4192785-4193703:-1
so has part: feature:4192785-4193703:-1:exon
subclass of: SO_0000010

125341773
type: Gene
SIO_000068: ncbigene

position:4192785:-1
position: 4192785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4193703:-1
position: 4193703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4192785-4193703:-1:exon

LOC125341773
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125341773
product: uncharacterized LOC125341773
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048333867.1
SIO_010081: LOC125341773
subclass of: SO_0000673
so part of: LOC125341773
location: complement(join(4192785..4193245,4193475..4193703))
location: region:4192785-4193703:-1
so has part: feature:4193475-4193703:-1:exon
so has part: feature:4192785-4193245:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4193475-4193703:-1:exon

position:4193475:-1
position: 4193475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4192785-4193245:-1:exon

position:4193245:-1
position: 4193245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125341773
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125341773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125341773
translation: MPADCAASGRPAAGRTRRVAPPGSRERSNAAGAERKRQPRRAAHRARRRAEPAARERAAGRRKTRTGAAERGGGGGGGPGGARGCGDPGSAPACGLGGALDRLRRPPSRTPRLRAALGGRQSAEVRCPPPAAWMGGCGEGGAGDWGRGRGRSLRAGMSRLPETSRPDTSYAQSGGSWGPRATASPKVFPTPTARCAEGNKPGAQRSLRGTRRLRRERTGRPRRGCGGTP
SIO_010081: LOC125341773
subclass of: SO_0000673
so part of: LOC125341773
location: complement(join(4192785..4193245,4193475..4193703))
location: region:4192785-4193703:-1
so has part: feature:4193475-4193703:-1:exon
so has part: feature:4192785-4193245:-1:exon

XP_048189824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4193475-4193703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4192785-4193245:-1:exon

Unc5a
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Unc5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4193548..4251715
location: region:4193548-4251715:1
so has part: feature:4193548-4251715:1:exon
subclass of: SO_0000010

125341944
type: Gene
SIO_000068: ncbigene

position:4193548:1
position: 4193548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4251715:1
position: 4251715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4193548-4251715:1:exon

Unc5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Unc5a
product: unc-5 netrin receptor A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334072.1
SIO_010081: Unc5a
subclass of: SO_0000673
so part of: Unc5a
location: join(4193548..4193868,4235498..4235719,4240667..4240810,4241290..4241393,4241540..4241720,4242430..4242597,4243173..4243337,4245000..4245188,4245555..4245857,4249108..4249195,4249371..4249539,4249917..4250150,4250265..4250414,4250501..4250665,4251103..4251281,4251486..4251715)
location: region:4193548-4251715:1
so has part: feature:4193548-4193868:1:exon
so has part: feature:4235498-4235719:1:exon
so has part: feature:4240667-4240810:1:exon
so has part: feature:4241290-4241393:1:exon
so has part: feature:4241540-4241720:1:exon
so has part: feature:4242430-4242597:1:exon
so has part: feature:4243173-4243337:1:exon
so has part: feature:4245000-4245188:1:exon
so has part: feature:4245555-4245857:1:exon
so has part: feature:4249108-4249195:1:exon
so has part: feature:4249371-4249539:1:exon
so has part: feature:4249917-4250150:1:exon
so has part: feature:4250265-4250414:1:exon
so has part: feature:4250501-4250665:1:exon
so has part: feature:4251103-4251281:1:exon
so has part: feature:4251486-4251715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4193548-4193868:1:exon

position:4193868:1
position: 4193868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4235498-4235719:1:exon

position:4235498:1
position: 4235498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4235719:1
position: 4235719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4240667-4240810:1:exon

position:4240667:1
position: 4240667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4240810:1
position: 4240810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4241290-4241393:1:exon

position:4241290:1
position: 4241290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4241393:1
position: 4241393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4241540-4241720:1:exon

position:4241540:1
position: 4241540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4241720:1
position: 4241720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4242430-4242597:1:exon

position:4242430:1
position: 4242430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4242597:1
position: 4242597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4243173-4243337:1:exon

position:4243173:1
position: 4243173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4243337:1
position: 4243337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4245000-4245188:1:exon

position:4245000:1
position: 4245000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4245188:1
position: 4245188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4245555-4245857:1:exon

position:4245555:1
position: 4245555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4245857:1
position: 4245857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4249108-4249195:1:exon

position:4249108:1
position: 4249108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4249195:1
position: 4249195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4249371-4249539:1:exon

position:4249371:1
position: 4249371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4249539:1
position: 4249539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4249917-4250150:1:exon

position:4249917:1
position: 4249917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4250150:1
position: 4250150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4250265-4250414:1:exon

position:4250265:1
position: 4250265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4250414:1
position: 4250414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4250501-4250665:1:exon

position:4250501:1
position: 4250501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4250665:1
position: 4250665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4251103-4251281:1:exon

position:4251103:1
position: 4251103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4251281:1
position: 4251281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4251486-4251715:1:exon

position:4251486:1
position: 4251486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Unc5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Unc5a
product: unc-5 netrin receptor A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334073.1
SIO_010081: Unc5a
subclass of: SO_0000673
so part of: Unc5a
location: join(4193548..4193868,4235498..4235719,4240667..4240810,4241290..4241393,4241540..4241720,4243173..4243337,4245000..4245188,4245555..4245857,4249108..4249195,4249371..4249539,4249917..4250150,4250265..4250414,4250501..4250665,4251103..4251281,4251486..4251715)
location: region:4193548-4251715:1
so has part: feature:4193548-4193868:1:exon
so has part: feature:4235498-4235719:1:exon
so has part: feature:4240667-4240810:1:exon
so has part: feature:4241290-4241393:1:exon
so has part: feature:4241540-4241720:1:exon
so has part: feature:4243173-4243337:1:exon
so has part: feature:4245000-4245188:1:exon
so has part: feature:4245555-4245857:1:exon
so has part: feature:4249108-4249195:1:exon
so has part: feature:4249371-4249539:1:exon
so has part: feature:4249917-4250150:1:exon
so has part: feature:4250265-4250414:1:exon
so has part: feature:4250501-4250665:1:exon
so has part: feature:4251103-4251281:1:exon
so has part: feature:4251486-4251715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4193548-4193868:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4235498-4235719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4240667-4240810:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4241290-4241393:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4241540-4241720:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4243173-4243337:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245000-4245188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4245555-4245857:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4249108-4249195:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4249371-4249539:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4249917-4250150:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4250265-4250414:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4250501-4250665:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4251103-4251281:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4251486-4251715:1:exon

Unc5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Unc5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: netrin receptor UNC5A isoform X1
translation: MAVRPGLCPALLGLALASWLGGSGAQQSATMANPVPGGSPELLPHFLVEPEDVYIVKNKPVLLVCKALPATQIFFKCNGEWVRQVDHMIERSTDGSSGLPAMEVRINVSRQQVEKVFGLEEYWCQCVAWSSSGTTKSQKAYIRIAYLRKNFEQEPLAKEVSLEQGIVLPCRPPEGIPPAEVEWLRNEDPVDPSLDPNVYITREHSLVVRQARLADTANYTCVAKNIVARRRSASAAVIVYVNGGWSTWTEWSVCSASCGRGWQKRSRSCTNPAPLNGGAFCEGQNVQKTACATLCPVDGSWSPWSKWSACGLDCTHWRSRECSDPAPRNGGEECRGADLDTRNCTSDLCVHTVSGPEDVALYVGLIAVAVCLVLLLLVLILVYCRKKEGLDSDVADSSILTSGFQPVSIKPSKTDNPHLLTIQPDLSTTTTTYQGSLCPRQDGSSPKFQLTNGHLLSPLGGGRHTLHHSSPTSEAEDFVSRLSTQNYFRSLPRGTSNMAYGTFNFLGGRLMLPNTGISLLIPPDAIPRGKIYEIYLTLHKPEDVRLPLAGCQTLLSPIVSCGPPGVLLTRPVILAMDHCGEPGPDSWSLRLKKQSCEGTWEDVLHLGEEAPSNLYYCQLEAGACYVFTEQLGRFALVGEALSVAAAKRLKLLLFAPLACTSLEYNIRVYCLHDTHDALKEVVQLEKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVASSLWKSKLLVSYQEIPFYHIWNGTQQYLHCTFTLERVHPSTSDLACKVWVWQVEGDGQSFNINFNITKDTRFSELLALESEGGVPALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSPTAMILNLWEARHFPNGNLSQLAAAVAGLGQPDAGLFTVSEAEC
SIO_010081: Unc5a
subclass of: SO_0000673
so part of: Unc5a
location: join(4193799..4193868,4235498..4235719,4240667..4240810,4241290..4241393,4241540..4241720,4242430..4242597,4243173..4243337,4245000..4245188,4245555..4245857,4249108..4249195,4249371..4249539,4249917..4250150,4250265..4250414,4250501..4250665,4251103..4251281,4251486..4251651)
location: region:4193799-4251651:1
so has part: feature:4193799-4193868:1:exon
so has part: feature:4235498-4235719:1:exon
so has part: feature:4240667-4240810:1:exon
so has part: feature:4241290-4241393:1:exon
so has part: feature:4241540-4241720:1:exon
so has part: feature:4242430-4242597:1:exon
so has part: feature:4243173-4243337:1:exon
so has part: feature:4245000-4245188:1:exon
so has part: feature:4245555-4245857:1:exon
so has part: feature:4249108-4249195:1:exon
so has part: feature:4249371-4249539:1:exon
so has part: feature:4249917-4250150:1:exon
so has part: feature:4250265-4250414:1:exon
so has part: feature:4250501-4250665:1:exon
so has part: feature:4251103-4251281:1:exon
so has part: feature:4251486-4251651:1:exon

XP_048190029.1
type: Protein
SIO_000068: ncbiprotein

position:4193799:1
position: 4193799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4251651:1
position: 4251651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4193799-4193868:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4235498-4235719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4240667-4240810:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4241290-4241393:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4241540-4241720:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4242430-4242597:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4243173-4243337:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4245000-4245188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4245555-4245857:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4249108-4249195:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4249371-4249539:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4249917-4250150:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4250265-4250414:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4250501-4250665:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4251103-4251281:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4251486-4251651:1:exon

Unc5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Unc5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: netrin receptor UNC5A isoform X2
translation: MAVRPGLCPALLGLALASWLGGSGAQQSATMANPVPGGSPELLPHFLVEPEDVYIVKNKPVLLVCKALPATQIFFKCNGEWVRQVDHMIERSTDGSSGLPAMEVRINVSRQQVEKVFGLEEYWCQCVAWSSSGTTKSQKAYIRIAYLRKNFEQEPLAKEVSLEQGIVLPCRPPEGIPPAEVEWLRNEDPVDPSLDPNVYITREHSLVVRQARLADTANYTCVAKNIVARRRSASAAVIVYVDGSWSPWSKWSACGLDCTHWRSRECSDPAPRNGGEECRGADLDTRNCTSDLCVHTVSGPEDVALYVGLIAVAVCLVLLLLVLILVYCRKKEGLDSDVADSSILTSGFQPVSIKPSKTDNPHLLTIQPDLSTTTTTYQGSLCPRQDGSSPKFQLTNGHLLSPLGGGRHTLHHSSPTSEAEDFVSRLSTQNYFRSLPRGTSNMAYGTFNFLGGRLMLPNTGISLLIPPDAIPRGKIYEIYLTLHKPEDVRLPLAGCQTLLSPIVSCGPPGVLLTRPVILAMDHCGEPGPDSWSLRLKKQSCEGTWEDVLHLGEEAPSNLYYCQLEAGACYVFTEQLGRFALVGEALSVAAAKRLKLLLFAPLACTSLEYNIRVYCLHDTHDALKEVVQLEKQLGGQLIQEPRVLHFKDSYHNLRLSIHDVASSLWKSKLLVSYQEIPFYHIWNGTQQYLHCTFTLERVHPSTSDLACKVWVWQVEGDGQSFNINFNITKDTRFSELLALESEGGVPALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSPTAMILNLWEARHFPNGNLSQLAAAVAGLGQPDAGLFTVSEAEC
SIO_010081: Unc5a
subclass of: SO_0000673
so part of: Unc5a
location: join(4193799..4193868,4235498..4235719,4240667..4240810,4241290..4241393,4241540..4241720,4243173..4243337,4245000..4245188,4245555..4245857,4249108..4249195,4249371..4249539,4249917..4250150,4250265..4250414,4250501..4250665,4251103..4251281,4251486..4251651)
location: region:4193799-4251651:1
so has part: feature:4193799-4193868:1:exon
so has part: feature:4235498-4235719:1:exon
so has part: feature:4240667-4240810:1:exon
so has part: feature:4241290-4241393:1:exon
so has part: feature:4241540-4241720:1:exon
so has part: feature:4243173-4243337:1:exon
so has part: feature:4245000-4245188:1:exon
so has part: feature:4245555-4245857:1:exon
so has part: feature:4249108-4249195:1:exon
so has part: feature:4249371-4249539:1:exon
so has part: feature:4249917-4250150:1:exon
so has part: feature:4250265-4250414:1:exon
so has part: feature:4250501-4250665:1:exon
so has part: feature:4251103-4251281:1:exon
so has part: feature:4251486-4251651:1:exon

XP_048190030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4193799-4193868:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4235498-4235719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4240667-4240810:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4241290-4241393:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4241540-4241720:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4243173-4243337:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245000-4245188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4245555-4245857:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4249108-4249195:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4249371-4249539:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4249917-4250150:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4250265-4250414:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4250501-4250665:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4251103-4251281:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4251486-4251651:1:exon

Hk3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Hk3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4252709..4263130)
location: region:4252709-4263130:-1
so has part: feature:4252709-4263130:-1:exon
subclass of: SO_0000010

125341869
type: Gene
SIO_000068: ncbigene

position:4252709:-1
position: 4252709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4263130:-1
position: 4263130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4252709-4263130:-1:exon

Hk3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hk3
product: hexokinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048333987.1
SIO_010081: Hk3
subclass of: SO_0000673
so part of: Hk3
location: complement(join(4252709..4252999,4253251..4253484,4253896..4254051,4254147..4254330,4256398..4256497,4256669..4256764,4258444..4258563,4258645..4258784,4258881..4259176,4259754..4259987,4260147..4260302,4260988..4261171,4261252..4261351,4262007..4262102,4262180..4262299,4262386..4262540,4262970..4263130))
location: region:4252709-4263130:-1
so has part: feature:4262970-4263130:-1:exon
so has part: feature:4262386-4262540:-1:exon
so has part: feature:4262180-4262299:-1:exon
so has part: feature:4262007-4262102:-1:exon
so has part: feature:4261252-4261351:-1:exon
so has part: feature:4260988-4261171:-1:exon
so has part: feature:4260147-4260302:-1:exon
so has part: feature:4259754-4259987:-1:exon
so has part: feature:4258881-4259176:-1:exon
so has part: feature:4258645-4258784:-1:exon
so has part: feature:4258444-4258563:-1:exon
so has part: feature:4256669-4256764:-1:exon
so has part: feature:4256398-4256497:-1:exon
so has part: feature:4254147-4254330:-1:exon
so has part: feature:4253896-4254051:-1:exon
so has part: feature:4253251-4253484:-1:exon
so has part: feature:4252709-4252999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4262970-4263130:-1:exon

position:4262970:-1
position: 4262970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4262386-4262540:-1:exon

position:4262386:-1
position: 4262386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4262540:-1
position: 4262540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4262180-4262299:-1:exon

position:4262180:-1
position: 4262180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4262299:-1
position: 4262299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4262007-4262102:-1:exon

position:4262007:-1
position: 4262007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4262102:-1
position: 4262102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4261252-4261351:-1:exon

position:4261252:-1
position: 4261252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4261351:-1
position: 4261351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4260988-4261171:-1:exon

position:4260988:-1
position: 4260988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4261171:-1
position: 4261171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4260147-4260302:-1:exon

position:4260147:-1
position: 4260147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4260302:-1
position: 4260302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4259754-4259987:-1:exon

position:4259754:-1
position: 4259754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4259987:-1
position: 4259987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4258881-4259176:-1:exon

position:4258881:-1
position: 4258881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4259176:-1
position: 4259176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4258645-4258784:-1:exon

position:4258645:-1
position: 4258645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4258784:-1
position: 4258784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4258444-4258563:-1:exon

position:4258444:-1
position: 4258444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4258563:-1
position: 4258563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4256669-4256764:-1:exon

position:4256669:-1
position: 4256669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4256764:-1
position: 4256764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4256398-4256497:-1:exon

position:4256398:-1
position: 4256398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4256497:-1
position: 4256497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4254147-4254330:-1:exon

position:4254147:-1
position: 4254147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4254330:-1
position: 4254330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4253896-4254051:-1:exon

position:4253896:-1
position: 4253896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4254051:-1
position: 4254051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4253251-4253484:-1:exon

position:4253251:-1
position: 4253251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4253484:-1
position: 4253484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4252709-4252999:-1:exon

position:4252999:-1
position: 4252999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hk3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hk3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hexokinase-3
translation: MEQALGGQASPAPSVRMLPTYVGSTPHGTEQGDFLVLELGATGASLRVLWVTLTGTEGHRVEPRTQEFAIPQEVVLGPGQQLFDFAARCLCEFLDTQPVGSQGLQLGFSFSFPCHQTGLDRSTLISWTKGFRCSGVEGQDVVQLLRDAIRRQGAYSIDVVAVVNDTVGTMMGCEPGAGPCEIGLIVDMGTNACYMEEARHVAALDEDRGRSCVSVEWGSFDADAALGPLLTTFDLTLDRQSLNPGAQRFEKMIGGLYLGELVRLVLLHLAQHGVLFGASTFPALLSPGSISLEHVAQMEDPSTGAARAQEILQDLGLCPEASDSELVQCVCAAVSTRAAQLCAAALAAILARLQHNREQPRLQVAVAIGGRVFEQHPRFHGILQDTVVLLAPECDVSFVPSVDGGGRGVAMVTAVAARLAAQRRLLEETLAPFRLSREQLVAVQTQMREAMVKGLRGEASSLRMLPTYVRATPDGSERGDFLALDLGGTNFRVLLVRVTEEGAQIINHVYSIPECVAQGSGQQLFDHIVDCIVDFQQQQGLSGQSLPLGFTFSFPCQQLGLDKGILLNWTKGFNASDCEGQDVVCLLREAIRRRQAVELNVVAIVNDTVGTMMSCGYEDSRCEMGLIVGTGTNACYMEELRNVAGVPGGQGHMCINMEWGAFGDDGSLGTLGTCFDERVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQETQHLQTRDIFKTKFLSEIESDSLALRQVRAILEALGLPLTSDDALVVLEVCQAVSRRAAQLCGAGVAAVVEKIRENRGLEELAVTVGVDGTLYKLHPHFSSLVAATVRELAPRCVVTFLQSEDGSGKGAALVTAVACRLAQETQV
SIO_010081: Hk3
subclass of: SO_0000673
so part of: Hk3
location: complement(join(4252855..4252999,4253251..4253484,4253896..4254051,4254147..4254330,4256398..4256497,4256669..4256764,4258444..4258563,4258645..4258784,4258881..4259176,4259754..4259987,4260147..4260302,4260988..4261171,4261252..4261351,4262007..4262102,4262180..4262299,4262386..4262540,4262970..4263057))
location: region:4252855-4263057:-1
so has part: feature:4262970-4263057:-1:exon
so has part: feature:4262386-4262540:-1:exon
so has part: feature:4262180-4262299:-1:exon
so has part: feature:4262007-4262102:-1:exon
so has part: feature:4261252-4261351:-1:exon
so has part: feature:4260988-4261171:-1:exon
so has part: feature:4260147-4260302:-1:exon
so has part: feature:4259754-4259987:-1:exon
so has part: feature:4258881-4259176:-1:exon
so has part: feature:4258645-4258784:-1:exon
so has part: feature:4258444-4258563:-1:exon
so has part: feature:4256669-4256764:-1:exon
so has part: feature:4256398-4256497:-1:exon
so has part: feature:4254147-4254330:-1:exon
so has part: feature:4253896-4254051:-1:exon
so has part: feature:4253251-4253484:-1:exon
so has part: feature:4252855-4252999:-1:exon

XP_048189944.1
type: Protein
SIO_000068: ncbiprotein

position:4252855:-1
position: 4252855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4263057:-1
position: 4263057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4262970-4263057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4262386-4262540:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4262180-4262299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4262007-4262102:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4261252-4261351:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4260988-4261171:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4260147-4260302:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4259754-4259987:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4258881-4259176:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4258645-4258784:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4258444-4258563:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4256669-4256764:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4256398-4256497:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4254147-4254330:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4253896-4254051:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4253251-4253484:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4252855-4252999:-1:exon

Uimc1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Uimc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4275169..4362065)
location: region:4275169-4362065:-1
so has part: feature:4275169-4362065:-1:exon
subclass of: SO_0000010

125341834
type: Gene
SIO_000068: ncbigene

position:4275169:-1
position: 4275169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4362065:-1
position: 4362065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4275169-4362065:-1:exon

Uimc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Uimc1
product: ubiquitin interaction motif containing 1, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048333928.1
SIO_010081: Uimc1
subclass of: SO_0000673
so part of: Uimc1
location: complement(join(4275169..4275581,4276085..4276127,4277163..4277226,4279342..4279513,4282350..4282428,4307091..4307244,4314455..4314555,4320292..4320368,4322253..4322317,4330794..4330918,4350325..4350409,4354300..4354454,4362031..4362065))
location: region:4275169-4362065:-1
so has part: feature:4362031-4362065:-1:exon
so has part: feature:4354300-4354454:-1:exon
so has part: feature:4350325-4350409:-1:exon
so has part: feature:4330794-4330918:-1:exon
so has part: feature:4322253-4322317:-1:exon
so has part: feature:4320292-4320368:-1:exon
so has part: feature:4314455-4314555:-1:exon
so has part: feature:4307091-4307244:-1:exon
so has part: feature:4282350-4282428:-1:exon
so has part: feature:4279342-4279513:-1:exon
so has part: feature:4277163-4277226:-1:exon
so has part: feature:4276085-4276127:-1:exon
so has part: feature:4275169-4275581:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4362031-4362065:-1:exon

position:4362031:-1
position: 4362031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4354300-4354454:-1:exon

position:4354300:-1
position: 4354300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4354454:-1
position: 4354454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4350325-4350409:-1:exon

position:4350325:-1
position: 4350325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4350409:-1
position: 4350409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4330794-4330918:-1:exon

position:4330794:-1
position: 4330794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4330918:-1
position: 4330918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4322253-4322317:-1:exon

position:4322253:-1
position: 4322253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4322317:-1
position: 4322317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4320292-4320368:-1:exon

position:4320292:-1
position: 4320292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4320368:-1
position: 4320368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4314455-4314555:-1:exon

position:4314455:-1
position: 4314455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4314555:-1
position: 4314555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4307091-4307244:-1:exon

position:4307091:-1
position: 4307091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4307244:-1
position: 4307244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4282350-4282428:-1:exon

position:4282350:-1
position: 4282350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4282428:-1
position: 4282428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4279342-4279513:-1:exon

position:4279342:-1
position: 4279342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4279513:-1
position: 4279513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4277163-4277226:-1:exon

position:4277163:-1
position: 4277163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4277226:-1
position: 4277226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4276085-4276127:-1:exon

position:4276085:-1
position: 4276085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4276127:-1
position: 4276127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4275169-4275581:-1:exon

position:4275581:-1
position: 4275581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Uimc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Uimc1
product: ubiquitin interaction motif containing 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048333927.1
SIO_010081: Uimc1
subclass of: SO_0000673
so part of: Uimc1
location: complement(join(4275169..4275581,4276085..4276127,4277163..4277226,4279342..4279513,4282350..4282428,4307076..4307244,4314455..4314555,4320292..4320368,4322253..4322317,4330794..4330918,4350325..4350409,4354300..4354454,4362031..4362065))
location: region:4275169-4362065:-1
so has part: feature:4362031-4362065:-1:exon
so has part: feature:4354300-4354454:-1:exon
so has part: feature:4350325-4350409:-1:exon
so has part: feature:4330794-4330918:-1:exon
so has part: feature:4322253-4322317:-1:exon
so has part: feature:4320292-4320368:-1:exon
so has part: feature:4314455-4314555:-1:exon
so has part: feature:4307076-4307244:-1:exon
so has part: feature:4282350-4282428:-1:exon
so has part: feature:4279342-4279513:-1:exon
so has part: feature:4277163-4277226:-1:exon
so has part: feature:4276085-4276127:-1:exon
so has part: feature:4275169-4275581:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4362031-4362065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4354300-4354454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4350325-4350409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4330794-4330918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4322253-4322317:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4320292-4320368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4314455-4314555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4307076-4307244:-1:exon

position:4307076:-1
position: 4307076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4282350-4282428:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4279342-4279513:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4277163-4277226:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4276085-4276127:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4275169-4275581:-1:exon

Uimc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Uimc1
product: ubiquitin interaction motif containing 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048333926.1
SIO_010081: Uimc1
subclass of: SO_0000673
so part of: Uimc1
location: complement(join(4275169..4275581,4276085..4276127,4277163..4277226,4279342..4279513,4282350..4282428,4307076..4307244,4314479..4314555,4320292..4320368,4322253..4322317,4328745..4329481,4329798..4329903,4330794..4330918,4350325..4350409,4354300..4354454,4362031..4362065))
location: region:4275169-4362065:-1
so has part: feature:4362031-4362065:-1:exon
so has part: feature:4354300-4354454:-1:exon
so has part: feature:4350325-4350409:-1:exon
so has part: feature:4330794-4330918:-1:exon
so has part: feature:4329798-4329903:-1:exon
so has part: feature:4328745-4329481:-1:exon
so has part: feature:4322253-4322317:-1:exon
so has part: feature:4320292-4320368:-1:exon
so has part: feature:4314479-4314555:-1:exon
so has part: feature:4307076-4307244:-1:exon
so has part: feature:4282350-4282428:-1:exon
so has part: feature:4279342-4279513:-1:exon
so has part: feature:4277163-4277226:-1:exon
so has part: feature:4276085-4276127:-1:exon
so has part: feature:4275169-4275581:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4362031-4362065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4354300-4354454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4350325-4350409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4330794-4330918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4329798-4329903:-1:exon

position:4329798:-1
position: 4329798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4329903:-1
position: 4329903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4328745-4329481:-1:exon

position:4328745:-1
position: 4328745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4329481:-1
position: 4329481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4322253-4322317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4320292-4320368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4314479-4314555:-1:exon

position:4314479:-1
position: 4314479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4307076-4307244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4282350-4282428:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4279342-4279513:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4277163-4277226:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4276085-4276127:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4275169-4275581:-1:exon

Uimc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Uimc1
product: ubiquitin interaction motif containing 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048333924.1
SIO_010081: Uimc1
subclass of: SO_0000673
so part of: Uimc1
location: complement(join(4275169..4275581,4276085..4276127,4277163..4277226,4279342..4279513,4282350..4282428,4307091..4307244,4314455..4314555,4320292..4320368,4322253..4322317,4328745..4329481,4329798..4329903,4330794..4330918,4350325..4350409,4354300..4354454,4362031..4362065))
location: region:4275169-4362065:-1
so has part: feature:4362031-4362065:-1:exon
so has part: feature:4354300-4354454:-1:exon
so has part: feature:4350325-4350409:-1:exon
so has part: feature:4330794-4330918:-1:exon
so has part: feature:4329798-4329903:-1:exon
so has part: feature:4328745-4329481:-1:exon
so has part: feature:4322253-4322317:-1:exon
so has part: feature:4320292-4320368:-1:exon
so has part: feature:4314455-4314555:-1:exon
so has part: feature:4307091-4307244:-1:exon
so has part: feature:4282350-4282428:-1:exon
so has part: feature:4279342-4279513:-1:exon
so has part: feature:4277163-4277226:-1:exon
so has part: feature:4276085-4276127:-1:exon
so has part: feature:4275169-4275581:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4362031-4362065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4354300-4354454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4350325-4350409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4330794-4330918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4329798-4329903:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4328745-4329481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4322253-4322317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4320292-4320368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4314455-4314555:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4307091-4307244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4282350-4282428:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4279342-4279513:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4277163-4277226:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4276085-4276127:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4275169-4275581:-1:exon

Uimc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Uimc1
product: ubiquitin interaction motif containing 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048333923.1
SIO_010081: Uimc1
subclass of: SO_0000673
so part of: Uimc1
location: complement(join(4275169..4275581,4276085..4276127,4277163..4277226,4279342..4279513,4282350..4282428,4307076..4307244,4314455..4314555,4320292..4320368,4322253..4322317,4328745..4329481,4329798..4329903,4330794..4330918,4350325..4350409,4354300..4354454,4362031..4362065))
location: region:4275169-4362065:-1
so has part: feature:4362031-4362065:-1:exon
so has part: feature:4354300-4354454:-1:exon
so has part: feature:4350325-4350409:-1:exon
so has part: feature:4330794-4330918:-1:exon
so has part: feature:4329798-4329903:-1:exon
so has part: feature:4328745-4329481:-1:exon
so has part: feature:4322253-4322317:-1:exon
so has part: feature:4320292-4320368:-1:exon
so has part: feature:4314455-4314555:-1:exon
so has part: feature:4307076-4307244:-1:exon
so has part: feature:4282350-4282428:-1:exon
so has part: feature:4279342-4279513:-1:exon
so has part: feature:4277163-4277226:-1:exon
so has part: feature:4276085-4276127:-1:exon
so has part: feature:4275169-4275581:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4362031-4362065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4354300-4354454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4350325-4350409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4330794-4330918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4329798-4329903:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4328745-4329481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4322253-4322317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4320292-4320368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4314455-4314555:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4307076-4307244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4282350-4282428:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4279342-4279513:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4277163-4277226:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4276085-4276127:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4275169-4275581:-1:exon

Uimc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Uimc1
product: ubiquitin interaction motif containing 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048333925.1
SIO_010081: Uimc1
subclass of: SO_0000673
so part of: Uimc1
location: complement(join(4275169..4275581,4276085..4276127,4277163..4277226,4279342..4279513,4282350..4282428,4307076..4307244,4314455..4314555,4320292..4320368,4322253..4322317,4328745..4329481,4329798..4329903,4330794..4330918,4350325..4350409,4354300..4354454,4360639..4360755))
location: region:4275169-4360755:-1
so has part: feature:4360639-4360755:-1:exon
so has part: feature:4354300-4354454:-1:exon
so has part: feature:4350325-4350409:-1:exon
so has part: feature:4330794-4330918:-1:exon
so has part: feature:4329798-4329903:-1:exon
so has part: feature:4328745-4329481:-1:exon
so has part: feature:4322253-4322317:-1:exon
so has part: feature:4320292-4320368:-1:exon
so has part: feature:4314455-4314555:-1:exon
so has part: feature:4307076-4307244:-1:exon
so has part: feature:4282350-4282428:-1:exon
so has part: feature:4279342-4279513:-1:exon
so has part: feature:4277163-4277226:-1:exon
so has part: feature:4276085-4276127:-1:exon
so has part: feature:4275169-4275581:-1:exon

position:4360755:-1
position: 4360755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4360639-4360755:-1:exon

position:4360639:-1
position: 4360639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4354300-4354454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4350325-4350409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4330794-4330918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4329798-4329903:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4328745-4329481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4322253-4322317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4320292-4320368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4314455-4314555:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4307076-4307244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4282350-4282428:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4279342-4279513:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4277163-4277226:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4276085-4276127:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4275169-4275581:-1:exon

Uimc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Uimc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRCA1-A complex subunit RAP80 isoform X6
translation: MLGEKMARRKKKIKEALESQKLEKENAETPSSVSGRRKRKLEDAFIVISDSDGEEPKEENGLQNVETKQSNRANCLAKRKIAQMTEEEQFALALKMSEQEAREVNFKEEEEEELLRKAIAESLNSSQGLFVEETSEEKTAAPVPQSTAALTSKKSIVLMPESSAEEITVCPETQPSSPETLNFEREAFPSRRETLDEVRTMRDKEVDNRDNAKKKTPTPAFTSNNQVSCPLCDRSFPRSKIEQHAMYCNGLVDEDKVLTRRQKEARKKSSSGTAMQTSLDNDKNEKCYVCQSLVPFKEYQSHVDSCLQLAMGDQRDRSEKSARAHSPVEGKQQPQLRNPKEKGQNEGRLLSLLEQSEHKTADAEMNTKSSETGTFRSSSLGVEEAACSGKLQSSLSQLGFSESPIKSFVAISETTDCLVDFKNQLTVQPGSRTRAKAGRGKRRKT
SIO_010081: Uimc1
subclass of: SO_0000673
so part of: Uimc1
location: complement(join(4275371..4275581,4276085..4276127,4277163..4277226,4279342..4279513,4282350..4282428,4307091..4307244,4314455..4314555,4320292..4320368,4322253..4322317,4330794..4330918,4350325..4350409,4354300..4354454,4362031..4362037))
location: region:4275371-4362037:-1
so has part: feature:4362031-4362037:-1:exon
so has part: feature:4354300-4354454:-1:exon
so has part: feature:4350325-4350409:-1:exon
so has part: feature:4330794-4330918:-1:exon
so has part: feature:4322253-4322317:-1:exon
so has part: feature:4320292-4320368:-1:exon
so has part: feature:4314455-4314555:-1:exon
so has part: feature:4307091-4307244:-1:exon
so has part: feature:4282350-4282428:-1:exon
so has part: feature:4279342-4279513:-1:exon
so has part: feature:4277163-4277226:-1:exon
so has part: feature:4276085-4276127:-1:exon
so has part: feature:4275371-4275581:-1:exon

XP_048189885.1
type: Protein
SIO_000068: ncbiprotein

position:4275371:-1
position: 4275371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4362037:-1
position: 4362037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4362031-4362037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4354300-4354454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4350325-4350409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4330794-4330918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4322253-4322317:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4320292-4320368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4314455-4314555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4307091-4307244:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4282350-4282428:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4279342-4279513:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4277163-4277226:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4276085-4276127:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4275371-4275581:-1:exon

Uimc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Uimc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRCA1-A complex subunit RAP80 isoform X5
translation: MLGEKMARRKKKIKEALESQKLEKENAETPSSVSGRRKRKLEDAFIVISDSDGEEPKEENGLQNVETKQSNRANCLAKRKIAQMTEEEQFALALKMSEQEAREVNFKEEEEEELLRKAIAESLNSSQGLFVEETSEEKTAAPVPQSTAALTSKKSIVLMPESSAEEITVCPETQPSSPETLNFEREAFPSRRETLDEVRTMRDKEVDNRDNAKKKTPTPAFTSNNQVSCPLCDRSFPRSKIEQHAMYCNGLVDEDKGNNSPVLTRRQKEARKKSSSGTAMQTSLDNDKNEKCYVCQSLVPFKEYQSHVDSCLQLAMGDQRDRSEKSARAHSPVEGKQQPQLRNPKEKGQNEGRLLSLLEQSEHKTADAEMNTKSSETGTFRSSSLGVEEAACSGKLQSSLSQLGFSESPIKSFVAISETTDCLVDFKNQLTVQPGSRTRAKAGRGKRRKT
SIO_010081: Uimc1
subclass of: SO_0000673
so part of: Uimc1
location: complement(join(4275371..4275581,4276085..4276127,4277163..4277226,4279342..4279513,4282350..4282428,4307076..4307244,4314455..4314555,4320292..4320368,4322253..4322317,4330794..4330918,4350325..4350409,4354300..4354454,4362031..4362037))
location: region:4275371-4362037:-1
so has part: feature:4362031-4362037:-1:exon
so has part: feature:4354300-4354454:-1:exon
so has part: feature:4350325-4350409:-1:exon
so has part: feature:4330794-4330918:-1:exon
so has part: feature:4322253-4322317:-1:exon
so has part: feature:4320292-4320368:-1:exon
so has part: feature:4314455-4314555:-1:exon
so has part: feature:4307076-4307244:-1:exon
so has part: feature:4282350-4282428:-1:exon
so has part: feature:4279342-4279513:-1:exon
so has part: feature:4277163-4277226:-1:exon
so has part: feature:4276085-4276127:-1:exon
so has part: feature:4275371-4275581:-1:exon

XP_048189884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4362031-4362037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4354300-4354454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4350325-4350409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4330794-4330918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4322253-4322317:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4320292-4320368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4314455-4314555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4307076-4307244:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4282350-4282428:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4279342-4279513:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4277163-4277226:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4276085-4276127:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4275371-4275581:-1:exon

Uimc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Uimc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRCA1-A complex subunit RAP80 isoform X4
translation: MLGEKMARRKKKIKEALESQKLEKENAETPSSVSGRRKRKLEDAFIVISDSDGEEPKEENGLQNVETKQSNRANCLAKRKIAQMTEEEQFALALKMSEQEAREVNFKEEEEEELLRKAIAESLNSCRPSDASATRPPPLATGPSSHTYQEKTADSGTTEGIWQLAPPSLCKGSHISQGNEAEERKEPWDHTENSEEEPVSVSSGSWDQSSQPVFEDQNVKCFGRCTGHLAEHTKCEKPQESTGRGCAFLKAPHGRGDTSRHCFPTPVDAKDLQVMGSTVNYFWGIPFCPAGVDPNQYTKVILCQLEVYQKSLKMAQRQLLKKKGFGEPVLPSPPSLIQNEYGQGDQASDRNEGISEDVGDEDKEERQESRASVWHSKIKDFQENSNKSLKQKLLLEEEPTTSHGQSSQGLFVEETSEEKTAAPVPQSTAALTSKKSIVLMPESSAEEITVCPETQPSSPETLNFEREAFPSRRETLDEVDNRDNAKKKTPTPAFTSNNQVSCPLCDRSFPRSKIEQHAMYCNGLVDEDKGNNSPVLTRRQKEARKKSSSGTAMQTSLDNDKNEKCYVCQSLVPFKEYQSHVDSCLQLAMGDQRDRSEKSARAHSPVEGKQQPQLRNPKEKGQNEGRLLSLLEQSEHKTADAEMNTKSSETGTFRSSSLGVEEAACSGKLQSSLSQLGFSESPIKSFVAISETTDCLVDFKNQLTVQPGSRTRAKAGRGKRRKT
SIO_010081: Uimc1
subclass of: SO_0000673
so part of: Uimc1
location: complement(join(4275371..4275581,4276085..4276127,4277163..4277226,4279342..4279513,4282350..4282428,4307076..4307244,4314479..4314555,4320292..4320368,4322253..4322317,4328745..4329481,4329798..4329903,4330794..4330918,4350325..4350409,4354300..4354454,4362031..4362037))
location: region:4275371-4362037:-1
so has part: feature:4362031-4362037:-1:exon
so has part: feature:4354300-4354454:-1:exon
so has part: feature:4350325-4350409:-1:exon
so has part: feature:4330794-4330918:-1:exon
so has part: feature:4329798-4329903:-1:exon
so has part: feature:4328745-4329481:-1:exon
so has part: feature:4322253-4322317:-1:exon
so has part: feature:4320292-4320368:-1:exon
so has part: feature:4314479-4314555:-1:exon
so has part: feature:4307076-4307244:-1:exon
so has part: feature:4282350-4282428:-1:exon
so has part: feature:4279342-4279513:-1:exon
so has part: feature:4277163-4277226:-1:exon
so has part: feature:4276085-4276127:-1:exon
so has part: feature:4275371-4275581:-1:exon

XP_048189883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4362031-4362037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4354300-4354454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4350325-4350409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4330794-4330918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4329798-4329903:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4328745-4329481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4322253-4322317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4320292-4320368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4314479-4314555:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4307076-4307244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4282350-4282428:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4279342-4279513:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4277163-4277226:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4276085-4276127:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4275371-4275581:-1:exon

Uimc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Uimc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRCA1-A complex subunit RAP80 isoform X2
translation: MLGEKMARRKKKIKEALESQKLEKENAETPSSVSGRRKRKLEDAFIVISDSDGEEPKEENGLQNVETKQSNRANCLAKRKIAQMTEEEQFALALKMSEQEAREVNFKEEEEEELLRKAIAESLNSCRPSDASATRPPPLATGPSSHTYQEKTADSGTTEGIWQLAPPSLCKGSHISQGNEAEERKEPWDHTENSEEEPVSVSSGSWDQSSQPVFEDQNVKCFGRCTGHLAEHTKCEKPQESTGRGCAFLKAPHGRGDTSRHCFPTPVDAKDLQVMGSTVNYFWGIPFCPAGVDPNQYTKVILCQLEVYQKSLKMAQRQLLKKKGFGEPVLPSPPSLIQNEYGQGDQASDRNEGISEDVGDEDKEERQESRASVWHSKIKDFQENSNKSLKQKLLLEEEPTTSHGQSSQGLFVEETSEEKTAAPVPQSTAALTSKKSIVLMPESSAEEITVCPETQPSSPETLNFEREAFPSRRETLDEVRTMRDKEVDNRDNAKKKTPTPAFTSNNQVSCPLCDRSFPRSKIEQHAMYCNGLVDEDKVLTRRQKEARKKSSSGTAMQTSLDNDKNEKCYVCQSLVPFKEYQSHVDSCLQLAMGDQRDRSEKSARAHSPVEGKQQPQLRNPKEKGQNEGRLLSLLEQSEHKTADAEMNTKSSETGTFRSSSLGVEEAACSGKLQSSLSQLGFSESPIKSFVAISETTDCLVDFKNQLTVQPGSRTRAKAGRGKRRKT
SIO_010081: Uimc1
subclass of: SO_0000673
so part of: Uimc1
location: complement(join(4275371..4275581,4276085..4276127,4277163..4277226,4279342..4279513,4282350..4282428,4307091..4307244,4314455..4314555,4320292..4320368,4322253..4322317,4328745..4329481,4329798..4329903,4330794..4330918,4350325..4350409,4354300..4354454,4362031..4362037))
location: region:4275371-4362037:-1
so has part: feature:4362031-4362037:-1:exon
so has part: feature:4354300-4354454:-1:exon
so has part: feature:4350325-4350409:-1:exon
so has part: feature:4330794-4330918:-1:exon
so has part: feature:4329798-4329903:-1:exon
so has part: feature:4328745-4329481:-1:exon
so has part: feature:4322253-4322317:-1:exon
so has part: feature:4320292-4320368:-1:exon
so has part: feature:4314455-4314555:-1:exon
so has part: feature:4307091-4307244:-1:exon
so has part: feature:4282350-4282428:-1:exon
so has part: feature:4279342-4279513:-1:exon
so has part: feature:4277163-4277226:-1:exon
so has part: feature:4276085-4276127:-1:exon
so has part: feature:4275371-4275581:-1:exon

XP_048189881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4362031-4362037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4354300-4354454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4350325-4350409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4330794-4330918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4329798-4329903:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4328745-4329481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4322253-4322317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4320292-4320368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4314455-4314555:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4307091-4307244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4282350-4282428:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4279342-4279513:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4277163-4277226:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4276085-4276127:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4275371-4275581:-1:exon

Uimc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Uimc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRCA1-A complex subunit RAP80 isoform X1
translation: MLGEKMARRKKKIKEALESQKLEKENAETPSSVSGRRKRKLEDAFIVISDSDGEEPKEENGLQNVETKQSNRANCLAKRKIAQMTEEEQFALALKMSEQEAREVNFKEEEEEELLRKAIAESLNSCRPSDASATRPPPLATGPSSHTYQEKTADSGTTEGIWQLAPPSLCKGSHISQGNEAEERKEPWDHTENSEEEPVSVSSGSWDQSSQPVFEDQNVKCFGRCTGHLAEHTKCEKPQESTGRGCAFLKAPHGRGDTSRHCFPTPVDAKDLQVMGSTVNYFWGIPFCPAGVDPNQYTKVILCQLEVYQKSLKMAQRQLLKKKGFGEPVLPSPPSLIQNEYGQGDQASDRNEGISEDVGDEDKEERQESRASVWHSKIKDFQENSNKSLKQKLLLEEEPTTSHGQSSQGLFVEETSEEKTAAPVPQSTAALTSKKSIVLMPESSAEEITVCPETQPSSPETLNFEREAFPSRRETLDEVRTMRDKEVDNRDNAKKKTPTPAFTSNNQVSCPLCDRSFPRSKIEQHAMYCNGLVDEDKGNNSPVLTRRQKEARKKSSSGTAMQTSLDNDKNEKCYVCQSLVPFKEYQSHVDSCLQLAMGDQRDRSEKSARAHSPVEGKQQPQLRNPKEKGQNEGRLLSLLEQSEHKTADAEMNTKSSETGTFRSSSLGVEEAACSGKLQSSLSQLGFSESPIKSFVAISETTDCLVDFKNQLTVQPGSRTRAKAGRGKRRKT
SIO_010081: Uimc1
subclass of: SO_0000673
so part of: Uimc1
location: complement(join(4275371..4275581,4276085..4276127,4277163..4277226,4279342..4279513,4282350..4282428,4307076..4307244,4314455..4314555,4320292..4320368,4322253..4322317,4328745..4329481,4329798..4329903,4330794..4330918,4350325..4350409,4354300..4354454,4362031..4362037))
location: region:4275371-4362037:-1
so has part: feature:4362031-4362037:-1:exon
so has part: feature:4354300-4354454:-1:exon
so has part: feature:4350325-4350409:-1:exon
so has part: feature:4330794-4330918:-1:exon
so has part: feature:4329798-4329903:-1:exon
so has part: feature:4328745-4329481:-1:exon
so has part: feature:4322253-4322317:-1:exon
so has part: feature:4320292-4320368:-1:exon
so has part: feature:4314455-4314555:-1:exon
so has part: feature:4307076-4307244:-1:exon
so has part: feature:4282350-4282428:-1:exon
so has part: feature:4279342-4279513:-1:exon
so has part: feature:4277163-4277226:-1:exon
so has part: feature:4276085-4276127:-1:exon
so has part: feature:4275371-4275581:-1:exon

XP_048189880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4362031-4362037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4354300-4354454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4350325-4350409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4330794-4330918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4329798-4329903:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4328745-4329481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4322253-4322317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4320292-4320368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4314455-4314555:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4307076-4307244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4282350-4282428:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4279342-4279513:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4277163-4277226:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4276085-4276127:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4275371-4275581:-1:exon

Uimc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Uimc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRCA1-A complex subunit RAP80 isoform X3
translation: MARRKKKIKEALESQKLEKENAETPSSVSGRRKRKLEDAFIVISDSDGEEPKEENGLQNVETKQSNRANCLAKRKIAQMTEEEQFALALKMSEQEAREVNFKEEEEEELLRKAIAESLNSCRPSDASATRPPPLATGPSSHTYQEKTADSGTTEGIWQLAPPSLCKGSHISQGNEAEERKEPWDHTENSEEEPVSVSSGSWDQSSQPVFEDQNVKCFGRCTGHLAEHTKCEKPQESTGRGCAFLKAPHGRGDTSRHCFPTPVDAKDLQVMGSTVNYFWGIPFCPAGVDPNQYTKVILCQLEVYQKSLKMAQRQLLKKKGFGEPVLPSPPSLIQNEYGQGDQASDRNEGISEDVGDEDKEERQESRASVWHSKIKDFQENSNKSLKQKLLLEEEPTTSHGQSSQGLFVEETSEEKTAAPVPQSTAALTSKKSIVLMPESSAEEITVCPETQPSSPETLNFEREAFPSRRETLDEVRTMRDKEVDNRDNAKKKTPTPAFTSNNQVSCPLCDRSFPRSKIEQHAMYCNGLVDEDKGNNSPVLTRRQKEARKKSSSGTAMQTSLDNDKNEKCYVCQSLVPFKEYQSHVDSCLQLAMGDQRDRSEKSARAHSPVEGKQQPQLRNPKEKGQNEGRLLSLLEQSEHKTADAEMNTKSSETGTFRSSSLGVEEAACSGKLQSSLSQLGFSESPIKSFVAISETTDCLVDFKNQLTVQPGSRTRAKAGRGKRRKT
SIO_010081: Uimc1
subclass of: SO_0000673
so part of: Uimc1
location: complement(join(4275371..4275581,4276085..4276127,4277163..4277226,4279342..4279513,4282350..4282428,4307076..4307244,4314455..4314555,4320292..4320368,4322253..4322317,4328745..4329481,4329798..4329903,4330794..4330918,4350325..4350409,4354300..4354446))
location: region:4275371-4354446:-1
so has part: feature:4354300-4354446:-1:exon
so has part: feature:4350325-4350409:-1:exon
so has part: feature:4330794-4330918:-1:exon
so has part: feature:4329798-4329903:-1:exon
so has part: feature:4328745-4329481:-1:exon
so has part: feature:4322253-4322317:-1:exon
so has part: feature:4320292-4320368:-1:exon
so has part: feature:4314455-4314555:-1:exon
so has part: feature:4307076-4307244:-1:exon
so has part: feature:4282350-4282428:-1:exon
so has part: feature:4279342-4279513:-1:exon
so has part: feature:4277163-4277226:-1:exon
so has part: feature:4276085-4276127:-1:exon
so has part: feature:4275371-4275581:-1:exon

XP_048189882.1
type: Protein
SIO_000068: ncbiprotein

position:4354446:-1
position: 4354446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4354300-4354446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4350325-4350409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4330794-4330918:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4329798-4329903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4328745-4329481:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4322253-4322317:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4320292-4320368:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4314455-4314555:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4307076-4307244:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4282350-4282428:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4279342-4279513:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4277163-4277226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4276085-4276127:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4275371-4275581:-1:exon

Znf346
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Znf346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4372934..4391309
location: region:4372934-4391309:1
so has part: feature:4372934-4391309:1:exon
subclass of: SO_0000010

125342079
type: Gene
SIO_000068: ncbigene

position:4372934:1
position: 4372934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4391309:1
position: 4391309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4372934-4391309:1:exon

Znf346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Znf346
product: zinc finger protein 346, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048334210.1
SIO_010081: Znf346
subclass of: SO_0000673
so part of: Znf346
location: join(4372934..4373108,4378830..4378933,4379627..4379719,4382071..4382215,4387183..4387416,4388145..4388238,4391163..4391309)
location: region:4372934-4391309:1
so has part: feature:4372934-4373108:1:exon
so has part: feature:4378830-4378933:1:exon
so has part: feature:4379627-4379719:1:exon
so has part: feature:4382071-4382215:1:exon
so has part: feature:4387183-4387416:1:exon
so has part: feature:4388145-4388238:1:exon
so has part: feature:4391163-4391309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4372934-4373108:1:exon

position:4373108:1
position: 4373108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4378830-4378933:1:exon

position:4378830:1
position: 4378830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4378933:1
position: 4378933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4379627-4379719:1:exon

position:4379627:1
position: 4379627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4379719:1
position: 4379719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4382071-4382215:1:exon

position:4382071:1
position: 4382071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4382215:1
position: 4382215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4387183-4387416:1:exon

position:4387183:1
position: 4387183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4387416:1
position: 4387416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4388145-4388238:1:exon

position:4388145:1
position: 4388145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4388238:1
position: 4388238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4391163-4391309:1:exon

position:4391163:1
position: 4391163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Znf346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Znf346
product: zinc finger protein 346, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048334211.1
SIO_010081: Znf346
subclass of: SO_0000673
so part of: Znf346
location: join(4372934..4373108,4378830..4378933,4379627..4379719,4382071..4382215,4387231..4387416,4388145..4388238,4391163..4391309)
location: region:4372934-4391309:1
so has part: feature:4372934-4373108:1:exon
so has part: feature:4378830-4378933:1:exon
so has part: feature:4379627-4379719:1:exon
so has part: feature:4382071-4382215:1:exon
so has part: feature:4387231-4387416:1:exon
so has part: feature:4388145-4388238:1:exon
so has part: feature:4391163-4391309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4372934-4373108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4378830-4378933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4379627-4379719:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4382071-4382215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4387231-4387416:1:exon

position:4387231:1
position: 4387231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4388145-4388238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4391163-4391309:1:exon

Znf346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Znf346
product: zinc finger protein 346, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048334212.1
SIO_010081: Znf346
subclass of: SO_0000673
so part of: Znf346
location: join(4372934..4373108,4378830..4378933,4382071..4382215,4387183..4387416,4388145..4388238,4391163..4391309)
location: region:4372934-4391309:1
so has part: feature:4372934-4373108:1:exon
so has part: feature:4378830-4378933:1:exon
so has part: feature:4382071-4382215:1:exon
so has part: feature:4387183-4387416:1:exon
so has part: feature:4388145-4388238:1:exon
so has part: feature:4391163-4391309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4372934-4373108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4378830-4378933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4382071-4382215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4387183-4387416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4388145-4388238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4391163-4391309:1:exon

Znf346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Znf346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X1
translation: MEFAAPYSTAAAGCGAAGQYHGSEEREGRGPDGARSDRERARRLWEAASSAQPVGREEVEHMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKRLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALSKRLINPFLVASTLALHQSREMIDPDKFCGLCHATFNDPAMAQQHYVGKKHRKQETKLKLMAHYGRLADPAVSDLTAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTAVLPLGQIPAQRQPIPKDSESTLDA
SIO_010081: Znf346
subclass of: SO_0000673
so part of: Znf346
location: join(4372934..4373108,4378830..4378933,4379627..4379719,4382071..4382215,4387183..4387416,4388145..4388238,4391163..4391253)
location: region:4372934-4391253:1
so has part: feature:4372934-4373108:1:exon
so has part: feature:4378830-4378933:1:exon
so has part: feature:4379627-4379719:1:exon
so has part: feature:4382071-4382215:1:exon
so has part: feature:4387183-4387416:1:exon
so has part: feature:4388145-4388238:1:exon
so has part: feature:4391163-4391253:1:exon

XP_048190167.1
type: Protein
SIO_000068: ncbiprotein

position:4391253:1
position: 4391253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4372934-4373108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4378830-4378933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4379627-4379719:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4382071-4382215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4387183-4387416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4388145-4388238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4391163-4391253:1:exon

Znf346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Znf346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X2
translation: MEFAAPYSTAAAGCGAAGQYHGSEEREGRGPDGARSDRERARRLWEAASSAQPVGREEVEHMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKRLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQSREMIDPDKFCGLCHATFNDPAMAQQHYVGKKHRKQETKLKLMAHYGRLADPAVSDLTAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTAVLPLGQIPAQRQPIPKDSESTLDA
SIO_010081: Znf346
subclass of: SO_0000673
so part of: Znf346
location: join(4372934..4373108,4378830..4378933,4379627..4379719,4382071..4382215,4387231..4387416,4388145..4388238,4391163..4391253)
location: region:4372934-4391253:1
so has part: feature:4372934-4373108:1:exon
so has part: feature:4378830-4378933:1:exon
so has part: feature:4379627-4379719:1:exon
so has part: feature:4382071-4382215:1:exon
so has part: feature:4387231-4387416:1:exon
so has part: feature:4388145-4388238:1:exon
so has part: feature:4391163-4391253:1:exon

XP_048190168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4372934-4373108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4378830-4378933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4379627-4379719:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4382071-4382215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4387231-4387416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4388145-4388238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4391163-4391253:1:exon

Znf346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Znf346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X3
translation: MEFAAPYSTAAAGCGAAGQYHGSEEREGRGPDGARSDRERARRLWEAASSAQPVGREEVEHMIQKNQCLFTNTQCKVCCALLISESQKLAHYQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALSKRLINPFLVASTLALHQSREMIDPDKFCGLCHATFNDPAMAQQHYVGKKHRKQETKLKLMAHYGRLADPAVSDLTAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTAVLPLGQIPAQRQPIPKDSESTLDA
SIO_010081: Znf346
subclass of: SO_0000673
so part of: Znf346
location: join(4372934..4373108,4378830..4378933,4382071..4382215,4387183..4387416,4388145..4388238,4391163..4391253)
location: region:4372934-4391253:1
so has part: feature:4372934-4373108:1:exon
so has part: feature:4378830-4378933:1:exon
so has part: feature:4382071-4382215:1:exon
so has part: feature:4387183-4387416:1:exon
so has part: feature:4388145-4388238:1:exon
so has part: feature:4391163-4391253:1:exon

XP_048190169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4372934-4373108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4378830-4378933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4382071-4382215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4387183-4387416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4388145-4388238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4391163-4391253:1:exon

Fgfr4
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Fgfr4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4405788..4416844
location: region:4405788-4416844:1
so has part: feature:4405788-4416844:1:exon
subclass of: SO_0000010

125341968
type: Gene
SIO_000068: ncbigene

position:4405788:1
position: 4405788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4416844:1
position: 4416844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4405788-4416844:1:exon

Fgfr4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Fgfr4
product: fibroblast growth factor receptor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048334105.1
SIO_010081: Fgfr4
subclass of: SO_0000673
so part of: Fgfr4
location: join(4405788..4406333,4406845..4407108,4407191..4407274,4407662..4407828,4409599..4409722,4410517..4410707,4410828..4410966,4411766..4411959,4412045..4412190,4412265..4412386,4413912..4414022,4414121..4414311,4414963..4415085,4415190..4415260,4415704..4415841,4416298..4416403,4416534..4416844)
location: region:4405788-4416844:1
so has part: feature:4405788-4406333:1:exon
so has part: feature:4406845-4407108:1:exon
so has part: feature:4407191-4407274:1:exon
so has part: feature:4407662-4407828:1:exon
so has part: feature:4409599-4409722:1:exon
so has part: feature:4410517-4410707:1:exon
so has part: feature:4410828-4410966:1:exon
so has part: feature:4411766-4411959:1:exon
so has part: feature:4412045-4412190:1:exon
so has part: feature:4412265-4412386:1:exon
so has part: feature:4413912-4414022:1:exon
so has part: feature:4414121-4414311:1:exon
so has part: feature:4414963-4415085:1:exon
so has part: feature:4415190-4415260:1:exon
so has part: feature:4415704-4415841:1:exon
so has part: feature:4416298-4416403:1:exon
so has part: feature:4416534-4416844:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4405788-4406333:1:exon

position:4406333:1
position: 4406333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4406845-4407108:1:exon

position:4406845:1
position: 4406845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4407108:1
position: 4407108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4407191-4407274:1:exon

position:4407191:1
position: 4407191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4407274:1
position: 4407274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4407662-4407828:1:exon

position:4407662:1
position: 4407662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4407828:1
position: 4407828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4409599-4409722:1:exon

position:4409599:1
position: 4409599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4409722:1
position: 4409722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4410517-4410707:1:exon

position:4410517:1
position: 4410517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4410707:1
position: 4410707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4410828-4410966:1:exon

position:4410828:1
position: 4410828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4410966:1
position: 4410966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4411766-4411959:1:exon

position:4411766:1
position: 4411766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4411959:1
position: 4411959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4412045-4412190:1:exon

position:4412045:1
position: 4412045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4412190:1
position: 4412190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4412265-4412386:1:exon

position:4412265:1
position: 4412265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4412386:1
position: 4412386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4413912-4414022:1:exon

position:4413912:1
position: 4413912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4414022:1
position: 4414022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4414121-4414311:1:exon

position:4414121:1
position: 4414121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4414311:1
position: 4414311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4414963-4415085:1:exon

position:4414963:1
position: 4414963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4415085:1
position: 4415085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4415190-4415260:1:exon

position:4415190:1
position: 4415190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4415260:1
position: 4415260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4415704-4415841:1:exon

position:4415704:1
position: 4415704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4415841:1
position: 4415841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4416298-4416403:1:exon

position:4416298:1
position: 4416298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4416403:1
position: 4416403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4416534-4416844:1:exon

position:4416534:1
position: 4416534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fgfr4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Fgfr4
product: fibroblast growth factor receptor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048334106.1
SIO_010081: Fgfr4
subclass of: SO_0000673
so part of: Fgfr4
location: join(4405788..4406330,4406842..4407108,4407191..4407274,4407662..4407828,4409599..4409722,4410517..4410707,4410828..4410966,4411766..4411959,4412045..4412190,4412265..4412386,4413912..4414022,4414121..4414311,4414963..4415085,4415190..4415260,4415704..4415841,4416298..4416403,4416534..4416844)
location: region:4405788-4416844:1
so has part: feature:4405788-4406330:1:exon
so has part: feature:4406842-4407108:1:exon
so has part: feature:4407191-4407274:1:exon
so has part: feature:4407662-4407828:1:exon
so has part: feature:4409599-4409722:1:exon
so has part: feature:4410517-4410707:1:exon
so has part: feature:4410828-4410966:1:exon
so has part: feature:4411766-4411959:1:exon
so has part: feature:4412045-4412190:1:exon
so has part: feature:4412265-4412386:1:exon
so has part: feature:4413912-4414022:1:exon
so has part: feature:4414121-4414311:1:exon
so has part: feature:4414963-4415085:1:exon
so has part: feature:4415190-4415260:1:exon
so has part: feature:4415704-4415841:1:exon
so has part: feature:4416298-4416403:1:exon
so has part: feature:4416534-4416844:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4405788-4406330:1:exon

position:4406330:1
position: 4406330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4406842-4407108:1:exon

position:4406842:1
position: 4406842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4407191-4407274:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4407662-4407828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4409599-4409722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4410517-4410707:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4410828-4410966:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4411766-4411959:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4412045-4412190:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4412265-4412386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4413912-4414022:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4414121-4414311:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4414963-4415085:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4415190-4415260:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4415704-4415841:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4416298-4416403:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4416534-4416844:1:exon

Fgfr4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Fgfr4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor receptor 4 isoform X1
translation: MQGLCQQKHSCSRNSFSPSPVLGRRSVGSPDWISRHTHQSIRKEMRLVLALLGVLLWAPGVLALALEASEETELEPCLASSLEKQEQELLVAVGQAVRLCCGQAERGGHWYKEGSRLAPAGRVRGWRGRLEIASFLPEDAGHYFCLARGSMTVLHNLTLLADVDSLTLSNDDEDPKAPEDSSNGHVYPQQAPYWTHPQRMEKKLHAVPAGNTVKFRCPAAGNPMPTISWLKDGQTFHGENRIGGIRLRHQHWSLVMESVVPSDRGTYTCIVENSVGSIRYSYLLDVLERSPHRPILQAGLPANTTAVAGSDVELLCKVYSDAQPHIQWLKHIVINGSSFGADGFPYVQVLKTADINSSEVEVLYLRNVSAEDAGEYTCLAGNSIGLSYQSAWLTVLPEEDVTWTAVTPGSKYTDIVLYASGAFILAVLLLLAGLCRGQTLHGRHPRQPATVQKLSRFPLARQFSLESGSSGKSSSSLVRGVRLSSTGPPLLAGLVNLDLPLDPLWEFPRDRLVLGKPLGEGCFGQVVRAEAFGMDPAQPDQTSTVAVKMLKDNASDKDLADLVSEMEVMKLIGRHKNIINLLGVCTQEGPLYVIVECAAKGNLREFLRARRPPGPDLSPDGPRSSEGPLAFPALVSCAYQVARGMQYLESRKCIHRDLAARNVLVTEDNVMKIADFGLARGVHHIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILLWEIFTLGGSPYPGIPVEELFSLLREGHRMDRPPNCPAELYGLMRECWHAVPSQRPTFKQLVEALDKVLLAVSEEYLDLRLTFGPYAPSSGDASSTCSSSDSVFSHDPLPLGPAPFPFPGVQTGTGA
SIO_010081: Fgfr4
subclass of: SO_0000673
so part of: Fgfr4
location: join(4406111..4406333,4406845..4407108,4407191..4407274,4407662..4407828,4409599..4409722,4410517..4410707,4410828..4410966,4411766..4411959,4412045..4412190,4412265..4412386,4413912..4414022,4414121..4414311,4414963..4415085,4415190..4415260,4415704..4415841,4416298..4416403,4416534..4416692)
location: region:4406111-4416692:1
so has part: feature:4406111-4406333:1:exon
so has part: feature:4406845-4407108:1:exon
so has part: feature:4407191-4407274:1:exon
so has part: feature:4407662-4407828:1:exon
so has part: feature:4409599-4409722:1:exon
so has part: feature:4410517-4410707:1:exon
so has part: feature:4410828-4410966:1:exon
so has part: feature:4411766-4411959:1:exon
so has part: feature:4412045-4412190:1:exon
so has part: feature:4412265-4412386:1:exon
so has part: feature:4413912-4414022:1:exon
so has part: feature:4414121-4414311:1:exon
so has part: feature:4414963-4415085:1:exon
so has part: feature:4415190-4415260:1:exon
so has part: feature:4415704-4415841:1:exon
so has part: feature:4416298-4416403:1:exon
so has part: feature:4416534-4416692:1:exon

XP_048190062.1
type: Protein
SIO_000068: ncbiprotein

position:4406111:1
position: 4406111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4416692:1
position: 4416692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4406111-4406333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4406845-4407108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4407191-4407274:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4407662-4407828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4409599-4409722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4410517-4410707:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4410828-4410966:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4411766-4411959:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4412045-4412190:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4412265-4412386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4413912-4414022:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4414121-4414311:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4414963-4415085:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4415190-4415260:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4415704-4415841:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4416298-4416403:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4416534-4416692:1:exon

Fgfr4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Fgfr4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor receptor 4 isoform X2
translation: MQGLCQQKHSCSRNSFSPSPVLGRRSVGSPDWISRHTHQSIRKEMRLVLALLGVLLWAPGVLALALEASEETEPEPCLASSLEKQEQELLVAVGQAVRLCCGQAERGGHWYKEGSRLAPAGRVRGWRGRLEIASFLPEDAGHYFCLARGSMTVLHNLTLLADVDSLTLSNDDEDPKAPEDSSNGHVYPQQAPYWTHPQRMEKKLHAVPAGNTVKFRCPAAGNPMPTISWLKDGQTFHGENRIGGIRLRHQHWSLVMESVVPSDRGTYTCIVENSVGSIRYSYLLDVLERSPHRPILQAGLPANTTAVAGSDVELLCKVYSDAQPHIQWLKHIVINGSSFGADGFPYVQVLKTADINSSEVEVLYLRNVSAEDAGEYTCLAGNSIGLSYQSAWLTVLPEEDVTWTAVTPGSKYTDIVLYASGAFILAVLLLLAGLCRGQTLHGRHPRQPATVQKLSRFPLARQFSLESGSSGKSSSSLVRGVRLSSTGPPLLAGLVNLDLPLDPLWEFPRDRLVLGKPLGEGCFGQVVRAEAFGMDPAQPDQTSTVAVKMLKDNASDKDLADLVSEMEVMKLIGRHKNIINLLGVCTQEGPLYVIVECAAKGNLREFLRARRPPGPDLSPDGPRSSEGPLAFPALVSCAYQVARGMQYLESRKCIHRDLAARNVLVTEDNVMKIADFGLARGVHHIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILLWEIFTLGGSPYPGIPVEELFSLLREGHRMDRPPNCPAELYGLMRECWHAVPSQRPTFKQLVEALDKVLLAVSEEYLDLRLTFGPYAPSSGDASSTCSSSDSVFSHDPLPLGPAPFPFPGVQTGTGA
SIO_010081: Fgfr4
subclass of: SO_0000673
so part of: Fgfr4
location: join(4406111..4406330,4406842..4407108,4407191..4407274,4407662..4407828,4409599..4409722,4410517..4410707,4410828..4410966,4411766..4411959,4412045..4412190,4412265..4412386,4413912..4414022,4414121..4414311,4414963..4415085,4415190..4415260,4415704..4415841,4416298..4416403,4416534..4416692)
location: region:4406111-4416692:1
so has part: feature:4406111-4406330:1:exon
so has part: feature:4406842-4407108:1:exon
so has part: feature:4407191-4407274:1:exon
so has part: feature:4407662-4407828:1:exon
so has part: feature:4409599-4409722:1:exon
so has part: feature:4410517-4410707:1:exon
so has part: feature:4410828-4410966:1:exon
so has part: feature:4411766-4411959:1:exon
so has part: feature:4412045-4412190:1:exon
so has part: feature:4412265-4412386:1:exon
so has part: feature:4413912-4414022:1:exon
so has part: feature:4414121-4414311:1:exon
so has part: feature:4414963-4415085:1:exon
so has part: feature:4415190-4415260:1:exon
so has part: feature:4415704-4415841:1:exon
so has part: feature:4416298-4416403:1:exon
so has part: feature:4416534-4416692:1:exon

XP_048190063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4406111-4406330:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4406842-4407108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4407191-4407274:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4407662-4407828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4409599-4409722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4410517-4410707:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4410828-4410966:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4411766-4411959:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4412045-4412190:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4412265-4412386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4413912-4414022:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4414121-4414311:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4414963-4415085:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4415190-4415260:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4415704-4415841:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4416298-4416403:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4416534-4416692:1:exon

Nsd1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Nsd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4443661..4540482
location: region:4443661-4540482:1
so has part: feature:4443661-4540482:1:exon
subclass of: SO_0000010

125341966
type: Gene
SIO_000068: ncbigene

position:4443661:1
position: 4443661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4540482:1
position: 4540482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4443661-4540482:1:exon

Nsd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Nsd1
product: nuclear receptor binding SET domain protein 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334101.1
SIO_010081: Nsd1
subclass of: SO_0000673
so part of: Nsd1
location: join(4443661..4443726,4444985..4445098,4445844..4445933,4465170..4465305,4471888..4472060,4475448..4478040,4489310..4489434,4492777..4493044,4496757..4496866,4500393..4500468,4502151..4502269,4503128..4503271,4510633..4510756,4517290..4517490,4518235..4518414,4519944..4520100,4520471..4520676,4522958..4523070,4524722..4524991,4525544..4525660,4527605..4527746,4534451..4534557,4536642..4536846,4538585..4540482)
location: region:4443661-4540482:1
so has part: feature:4443661-4443726:1:exon
so has part: feature:4444985-4445098:1:exon
so has part: feature:4445844-4445933:1:exon
so has part: feature:4465170-4465305:1:exon
so has part: feature:4471888-4472060:1:exon
so has part: feature:4475448-4478040:1:exon
so has part: feature:4489310-4489434:1:exon
so has part: feature:4492777-4493044:1:exon
so has part: feature:4496757-4496866:1:exon
so has part: feature:4500393-4500468:1:exon
so has part: feature:4502151-4502269:1:exon
so has part: feature:4503128-4503271:1:exon
so has part: feature:4510633-4510756:1:exon
so has part: feature:4517290-4517490:1:exon
so has part: feature:4518235-4518414:1:exon
so has part: feature:4519944-4520100:1:exon
so has part: feature:4520471-4520676:1:exon
so has part: feature:4522958-4523070:1:exon
so has part: feature:4524722-4524991:1:exon
so has part: feature:4525544-4525660:1:exon
so has part: feature:4527605-4527746:1:exon
so has part: feature:4534451-4534557:1:exon
so has part: feature:4536642-4536846:1:exon
so has part: feature:4538585-4540482:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4443661-4443726:1:exon

position:4443726:1
position: 4443726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4444985-4445098:1:exon

position:4444985:1
position: 4444985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4445098:1
position: 4445098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4445844-4445933:1:exon

position:4445844:1
position: 4445844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4445933:1
position: 4445933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4465170-4465305:1:exon

position:4465170:1
position: 4465170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4465305:1
position: 4465305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4471888-4472060:1:exon

position:4471888:1
position: 4471888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4472060:1
position: 4472060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4475448-4478040:1:exon

position:4475448:1
position: 4475448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4478040:1
position: 4478040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4489310-4489434:1:exon

position:4489310:1
position: 4489310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4489434:1
position: 4489434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4492777-4493044:1:exon

position:4492777:1
position: 4492777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4493044:1
position: 4493044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4496757-4496866:1:exon

position:4496757:1
position: 4496757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4496866:1
position: 4496866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4500393-4500468:1:exon

position:4500393:1
position: 4500393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4500468:1
position: 4500468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4502151-4502269:1:exon

position:4502151:1
position: 4502151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4502269:1
position: 4502269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4503128-4503271:1:exon

position:4503128:1
position: 4503128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4503271:1
position: 4503271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4510633-4510756:1:exon

position:4510633:1
position: 4510633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4510756:1
position: 4510756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4517290-4517490:1:exon

position:4517290:1
position: 4517290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4517490:1
position: 4517490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4518235-4518414:1:exon

position:4518235:1
position: 4518235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4518414:1
position: 4518414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4519944-4520100:1:exon

position:4519944:1
position: 4519944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4520100:1
position: 4520100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4520471-4520676:1:exon

position:4520471:1
position: 4520471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4520676:1
position: 4520676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4522958-4523070:1:exon

position:4522958:1
position: 4522958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4523070:1
position: 4523070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4524722-4524991:1:exon

position:4524722:1
position: 4524722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4524991:1
position: 4524991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4525544-4525660:1:exon

position:4525544:1
position: 4525544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4525660:1
position: 4525660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4527605-4527746:1:exon

position:4527605:1
position: 4527605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4527746:1
position: 4527746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4534451-4534557:1:exon

position:4534451:1
position: 4534451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4534557:1
position: 4534557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4536642-4536846:1:exon

position:4536642:1
position: 4536642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4536846:1
position: 4536846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4538585-4540482:1:exon

position:4538585:1
position: 4538585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nsd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Nsd1
product: nuclear receptor binding SET domain protein 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334102.1
SIO_010081: Nsd1
subclass of: SO_0000673
so part of: Nsd1
location: join(4444573..4444602,4444985..4445098,4445844..4445933,4465170..4465305,4471888..4472060,4475448..4478040,4489310..4489434,4492777..4493044,4496757..4496866,4500393..4500468,4502151..4502269,4503128..4503271,4510633..4510756,4517290..4517490,4518235..4518414,4519944..4520100,4520471..4520676,4522958..4523070,4524722..4524991,4525544..4525660,4527605..4527746,4534451..4534557,4536642..4536846,4538585..4540482)
location: region:4444573-4540482:1
so has part: feature:4444573-4444602:1:exon
so has part: feature:4444985-4445098:1:exon
so has part: feature:4445844-4445933:1:exon
so has part: feature:4465170-4465305:1:exon
so has part: feature:4471888-4472060:1:exon
so has part: feature:4475448-4478040:1:exon
so has part: feature:4489310-4489434:1:exon
so has part: feature:4492777-4493044:1:exon
so has part: feature:4496757-4496866:1:exon
so has part: feature:4500393-4500468:1:exon
so has part: feature:4502151-4502269:1:exon
so has part: feature:4503128-4503271:1:exon
so has part: feature:4510633-4510756:1:exon
so has part: feature:4517290-4517490:1:exon
so has part: feature:4518235-4518414:1:exon
so has part: feature:4519944-4520100:1:exon
so has part: feature:4520471-4520676:1:exon
so has part: feature:4522958-4523070:1:exon
so has part: feature:4524722-4524991:1:exon
so has part: feature:4525544-4525660:1:exon
so has part: feature:4527605-4527746:1:exon
so has part: feature:4534451-4534557:1:exon
so has part: feature:4536642-4536846:1:exon
so has part: feature:4538585-4540482:1:exon

position:4444573:1
position: 4444573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4444573-4444602:1:exon

position:4444602:1
position: 4444602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4444985-4445098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4445844-4445933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4465170-4465305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4471888-4472060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4475448-4478040:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4489310-4489434:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4492777-4493044:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4496757-4496866:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4500393-4500468:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4502151-4502269:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4503128-4503271:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4510633-4510756:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4517290-4517490:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4518235-4518414:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4519944-4520100:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4520471-4520676:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4522958-4523070:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4524722-4524991:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4525544-4525660:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4527605-4527746:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4534451-4534557:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4536642-4536846:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4538585-4540482:1:exon

Nsd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Nsd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase, H3 lysine-36 specific isoform X1
translation: MLLKTRTALSDDPDSSASTLGNMLELPGTSSSSTSQELPFCQPKKKPTPLKYEVGDLIWAKFKRRPWWPCRICSDPLINTHSKMKVANRRPYREYYVEAFGDPSERAWVAGKAIVMFEGRHQFEELPVLRKRGKQKEKGYRHKVPQKILSQWEASVGLAEQYDVPRGSKTRKCVNTSIKLDSEEDMPFEDCTNDPESEHELLLNGCLKSLDFDSEHSADEKEKPCAKSRARKNSDNPKRTSVKKGPMQFESNNEERRGKIPDSFGLNFISGDISDKQASNELSRMANSLTGSSTAPGSFLFSSCGKNTSKKEYETSNCDSLVDLSEGTLLSKRVGEKKKLQPGLVCSSKVQLCYIGAGNEEKQSDSISICTTSDEGSSDLDATDQSSESDDSVVEITDSFDRTENMLSMQKNEKLKHSRYPSKNSSVKEKQKSVITNSHTNHLVDCTKTAEPETEMSQVNLSDLNMSTLVHKPQIDFRNDGLSPKFNTPASIPSENSLIKDRGTSQLLLHSKSKQPKFRNIKYKHKSPVVVEPQVTNEDHNLKYCSSESKGSPLASIPKSGKVDGIKLLNNMHEKTRDSNDIETAVVKHVLSELKELSYRSLNEDISDSVTSKPSKPLLFSSASSQNHMPIESDYKFSTLLMMLKDMHDSKTKEQRLMTAQSMAPYRSPGGGDSSTTSAVVASKVLISGSSTQIQEKNGDGSQDSGRPSPGGGDSLSEELSASLPSLASDKGDLPAPGKSRSNCVTRRHCGGMKPSSKLREAFSAQIVRNSSKQKVLKTERKRKVHRKVHRLPAVRLPTVTGEVTLEGDKESESTVNGPSRGGAEDLAKEPLQLMGHLTSEEAHLSDAHFDNKVQQPDPDKIPEKGHSFEDKKGPELDSEMNNENVETIGVHLVVPKKRWQPLNQRRTKPGKRTNRLREKENSEGVFGVLLPADPAVPKELDECPERRTPPATNIIEDPLTDPNEASHSDSVGPPVNLSDKSRTSMEDVEKEPGIPSLTPQAELPEPAVPLEKKRLRKPSKWLLEYTEEYDQIFAPKKKQKKVQEQVHKVSSHCEEENLGRCRANVQNKQVDENCLISTKEEPPVLEREAPFLEGPLAHSDLGGGHAELPQLTLSVPVAQEVSPQLALESEDLVVKTPGNYESKRQRKPTKKLLESNDLDPGFMPKKGDLGLSRKCYEAVRLGNGISDSCTGAHLKDFGGGTTKIFDKPRKRKRQRHVTAKMQCKRVKIEDSSKETPSSEGELMTHRTAASPKETVEEGVEQDSGMAASKKLQVERGGGAALKENVCQNCEKLGELLLCEAQCCGAFHLECLGLTEMPRGKFICNECRTGIHTCFVCKQSGEDVKRCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHMCITCHAANPASVSASKGRLMRCVRCPVAYHANDFCLAAGSKILASNSIICPNHFTPRRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNIDIPEGNWYCNDCKAGKKPHYREIVWVKVGRYRWWPAEICHPRAIPSNIDKMRHDVGEFPVLFFGSNDYLWTHQARVFPYMEGDVSSKDKMGKGVDGTYKKALQEAAARFEELKAQKELRQLQEDRKNDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSECINRMLLYECHPTVCPAGGRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRHAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLGVRPKNQPIATEEKSKRFKKKQQGKRRSQGEVTKEREDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRPAGKWECPWHQCDVCGKEAASFCEMCPSSFCKQHREGMLFISKLDGRLSCTEHDPCGPNPLEPGEIREYVPPSVPLSPSSHLAEPSSEMAAQGSKMSDKSSAGTNQM…
SIO_010081: Nsd1
subclass of: SO_0000673
so part of: Nsd1
location: join(4445069..4445098,4445844..4445933,4465170..4465305,4471888..4472060,4475448..4478040,4489310..4489434,4492777..4493044,4496757..4496866,4500393..4500468,4502151..4502269,4503128..4503271,4510633..4510756,4517290..4517490,4518235..4518414,4519944..4520100,4520471..4520676,4522958..4523070,4524722..4524991,4525544..4525660,4527605..4527746,4534451..4534557,4536642..4536846,4538585..4540197)
location: region:4445069-4540197:1
so has part: feature:4445069-4445098:1:exon
so has part: feature:4445844-4445933:1:exon
so has part: feature:4465170-4465305:1:exon
so has part: feature:4471888-4472060:1:exon
so has part: feature:4475448-4478040:1:exon
so has part: feature:4489310-4489434:1:exon
so has part: feature:4492777-4493044:1:exon
so has part: feature:4496757-4496866:1:exon
so has part: feature:4500393-4500468:1:exon
so has part: feature:4502151-4502269:1:exon
so has part: feature:4503128-4503271:1:exon
so has part: feature:4510633-4510756:1:exon
so has part: feature:4517290-4517490:1:exon
so has part: feature:4518235-4518414:1:exon
so has part: feature:4519944-4520100:1:exon
so has part: feature:4520471-4520676:1:exon
so has part: feature:4522958-4523070:1:exon
so has part: feature:4524722-4524991:1:exon
so has part: feature:4525544-4525660:1:exon
so has part: feature:4527605-4527746:1:exon
so has part: feature:4534451-4534557:1:exon
so has part: feature:4536642-4536846:1:exon
so has part: feature:4538585-4540197:1:exon

XP_048190058.1
type: Protein
SIO_000068: ncbiprotein

position:4445069:1
position: 4445069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4540197:1
position: 4540197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4445069-4445098:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4445844-4445933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4465170-4465305:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4471888-4472060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4475448-4478040:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4489310-4489434:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4492777-4493044:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4496757-4496866:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4500393-4500468:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4502151-4502269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4503128-4503271:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4510633-4510756:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4517290-4517490:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4518235-4518414:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4519944-4520100:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4520471-4520676:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4522958-4523070:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4524722-4524991:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4525544-4525660:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4527605-4527746:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4534451-4534557:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4536642-4536846:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4538585-4540197:1:exon

Nsd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Nsd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase, H3 lysine-36 specific isoform X1
translation: MLLKTRTALSDDPDSSASTLGNMLELPGTSSSSTSQELPFCQPKKKPTPLKYEVGDLIWAKFKRRPWWPCRICSDPLINTHSKMKVANRRPYREYYVEAFGDPSERAWVAGKAIVMFEGRHQFEELPVLRKRGKQKEKGYRHKVPQKILSQWEASVGLAEQYDVPRGSKTRKCVNTSIKLDSEEDMPFEDCTNDPESEHELLLNGCLKSLDFDSEHSADEKEKPCAKSRARKNSDNPKRTSVKKGPMQFESNNEERRGKIPDSFGLNFISGDISDKQASNELSRMANSLTGSSTAPGSFLFSSCGKNTSKKEYETSNCDSLVDLSEGTLLSKRVGEKKKLQPGLVCSSKVQLCYIGAGNEEKQSDSISICTTSDEGSSDLDATDQSSESDDSVVEITDSFDRTENMLSMQKNEKLKHSRYPSKNSSVKEKQKSVITNSHTNHLVDCTKTAEPETEMSQVNLSDLNMSTLVHKPQIDFRNDGLSPKFNTPASIPSENSLIKDRGTSQLLLHSKSKQPKFRNIKYKHKSPVVVEPQVTNEDHNLKYCSSESKGSPLASIPKSGKVDGIKLLNNMHEKTRDSNDIETAVVKHVLSELKELSYRSLNEDISDSVTSKPSKPLLFSSASSQNHMPIESDYKFSTLLMMLKDMHDSKTKEQRLMTAQSMAPYRSPGGGDSSTTSAVVASKVLISGSSTQIQEKNGDGSQDSGRPSPGGGDSLSEELSASLPSLASDKGDLPAPGKSRSNCVTRRHCGGMKPSSKLREAFSAQIVRNSSKQKVLKTERKRKVHRKVHRLPAVRLPTVTGEVTLEGDKESESTVNGPSRGGAEDLAKEPLQLMGHLTSEEAHLSDAHFDNKVQQPDPDKIPEKGHSFEDKKGPELDSEMNNENVETIGVHLVVPKKRWQPLNQRRTKPGKRTNRLREKENSEGVFGVLLPADPAVPKELDECPERRTPPATNIIEDPLTDPNEASHSDSVGPPVNLSDKSRTSMEDVEKEPGIPSLTPQAELPEPAVPLEKKRLRKPSKWLLEYTEEYDQIFAPKKKQKKVQEQVHKVSSHCEEENLGRCRANVQNKQVDENCLISTKEEPPVLEREAPFLEGPLAHSDLGGGHAELPQLTLSVPVAQEVSPQLALESEDLVVKTPGNYESKRQRKPTKKLLESNDLDPGFMPKKGDLGLSRKCYEAVRLGNGISDSCTGAHLKDFGGGTTKIFDKPRKRKRQRHVTAKMQCKRVKIEDSSKETPSSEGELMTHRTAASPKETVEEGVEQDSGMAASKKLQVERGGGAALKENVCQNCEKLGELLLCEAQCCGAFHLECLGLTEMPRGKFICNECRTGIHTCFVCKQSGEDVKRCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHMCITCHAANPASVSASKGRLMRCVRCPVAYHANDFCLAAGSKILASNSIICPNHFTPRRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNIDIPEGNWYCNDCKAGKKPHYREIVWVKVGRYRWWPAEICHPRAIPSNIDKMRHDVGEFPVLFFGSNDYLWTHQARVFPYMEGDVSSKDKMGKGVDGTYKKALQEAAARFEELKAQKELRQLQEDRKNDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSECINRMLLYECHPTVCPAGGRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRHAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLGVRPKNQPIATEEKSKRFKKKQQGKRRSQGEVTKEREDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRPAGKWECPWHQCDVCGKEAASFCEMCPSSFCKQHREGMLFISKLDGRLSCTEHDPCGPNPLEPGEIREYVPPSVPLSPSSHLAEPSSEMAAQGSKMSDKSSAGTNQM…
SIO_010081: Nsd1
subclass of: SO_0000673
so part of: Nsd1
location: join(4445069..4445098,4445844..4445933,4465170..4465305,4471888..4472060,4475448..4478040,4489310..4489434,4492777..4493044,4496757..4496866,4500393..4500468,4502151..4502269,4503128..4503271,4510633..4510756,4517290..4517490,4518235..4518414,4519944..4520100,4520471..4520676,4522958..4523070,4524722..4524991,4525544..4525660,4527605..4527746,4534451..4534557,4536642..4536846,4538585..4540197)
location: region:4445069-4540197:1
so has part: feature:4445069-4445098:1:exon
so has part: feature:4445844-4445933:1:exon
so has part: feature:4465170-4465305:1:exon
so has part: feature:4471888-4472060:1:exon
so has part: feature:4475448-4478040:1:exon
so has part: feature:4489310-4489434:1:exon
so has part: feature:4492777-4493044:1:exon
so has part: feature:4496757-4496866:1:exon
so has part: feature:4500393-4500468:1:exon
so has part: feature:4502151-4502269:1:exon
so has part: feature:4503128-4503271:1:exon
so has part: feature:4510633-4510756:1:exon
so has part: feature:4517290-4517490:1:exon
so has part: feature:4518235-4518414:1:exon
so has part: feature:4519944-4520100:1:exon
so has part: feature:4520471-4520676:1:exon
so has part: feature:4522958-4523070:1:exon
so has part: feature:4524722-4524991:1:exon
so has part: feature:4525544-4525660:1:exon
so has part: feature:4527605-4527746:1:exon
so has part: feature:4534451-4534557:1:exon
so has part: feature:4536642-4536846:1:exon
so has part: feature:4538585-4540197:1:exon

XP_048190059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4445069-4445098:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4445844-4445933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4465170-4465305:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4471888-4472060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4475448-4478040:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4489310-4489434:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4492777-4493044:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4496757-4496866:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4500393-4500468:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4502151-4502269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4503128-4503271:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4510633-4510756:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4517290-4517490:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4518235-4518414:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4519944-4520100:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4520471-4520676:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4522958-4523070:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4524722-4524991:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4525544-4525660:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4527605-4527746:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4534451-4534557:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4536642-4536846:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4538585-4540197:1:exon

Nsd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Nsd1
product: nuclear receptor binding SET domain protein 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334103.1
SIO_010081: Nsd1
subclass of: SO_0000673
so part of: Nsd1
location: join(4465167..4465305,4469492..4469643,4471888..4472060,4475448..4478040,4489310..4489434,4492777..4493044,4496757..4496866,4500393..4500468,4502151..4502269,4503128..4503271,4510633..4510756,4517290..4517490,4518235..4518414,4519944..4520100,4520471..4520676,4522958..4523070,4524722..4524991,4525544..4525660,4527605..4527746,4534451..4534557,4536642..4536846,4538585..4540482)
location: region:4465167-4540482:1
so has part: feature:4465167-4465305:1:exon
so has part: feature:4469492-4469643:1:exon
so has part: feature:4471888-4472060:1:exon
so has part: feature:4475448-4478040:1:exon
so has part: feature:4489310-4489434:1:exon
so has part: feature:4492777-4493044:1:exon
so has part: feature:4496757-4496866:1:exon
so has part: feature:4500393-4500468:1:exon
so has part: feature:4502151-4502269:1:exon
so has part: feature:4503128-4503271:1:exon
so has part: feature:4510633-4510756:1:exon
so has part: feature:4517290-4517490:1:exon
so has part: feature:4518235-4518414:1:exon
so has part: feature:4519944-4520100:1:exon
so has part: feature:4520471-4520676:1:exon
so has part: feature:4522958-4523070:1:exon
so has part: feature:4524722-4524991:1:exon
so has part: feature:4525544-4525660:1:exon
so has part: feature:4527605-4527746:1:exon
so has part: feature:4534451-4534557:1:exon
so has part: feature:4536642-4536846:1:exon
so has part: feature:4538585-4540482:1:exon

position:4465167:1
position: 4465167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4465167-4465305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4469492-4469643:1:exon

position:4469492:1
position: 4469492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4469643:1
position: 4469643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4471888-4472060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4475448-4478040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4489310-4489434:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4492777-4493044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4496757-4496866:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4500393-4500468:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4502151-4502269:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4503128-4503271:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4510633-4510756:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4517290-4517490:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4518235-4518414:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4519944-4520100:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4520471-4520676:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4522958-4523070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4524722-4524991:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4525544-4525660:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4527605-4527746:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4534451-4534557:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4536642-4536846:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4538585-4540482:1:exon

Nsd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Nsd1
product: nuclear receptor binding SET domain protein 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334104.1
SIO_010081: Nsd1
subclass of: SO_0000673
so part of: Nsd1
location: join(4465173..4465305,4475448..4478040,4489310..4489434,4492777..4493044,4496757..4496866,4500393..4500468,4502151..4502269,4503128..4503271,4510633..4510756,4517290..4517490,4518235..4518414,4519944..4520100,4520471..4520676,4522958..4523070,4524722..4524991,4525544..4525660,4527605..4527746,4534451..4534557,4536642..4536846,4538585..4540482)
location: region:4465173-4540482:1
so has part: feature:4465173-4465305:1:exon
so has part: feature:4475448-4478040:1:exon
so has part: feature:4489310-4489434:1:exon
so has part: feature:4492777-4493044:1:exon
so has part: feature:4496757-4496866:1:exon
so has part: feature:4500393-4500468:1:exon
so has part: feature:4502151-4502269:1:exon
so has part: feature:4503128-4503271:1:exon
so has part: feature:4510633-4510756:1:exon
so has part: feature:4517290-4517490:1:exon
so has part: feature:4518235-4518414:1:exon
so has part: feature:4519944-4520100:1:exon
so has part: feature:4520471-4520676:1:exon
so has part: feature:4522958-4523070:1:exon
so has part: feature:4524722-4524991:1:exon
so has part: feature:4525544-4525660:1:exon
so has part: feature:4527605-4527746:1:exon
so has part: feature:4534451-4534557:1:exon
so has part: feature:4536642-4536846:1:exon
so has part: feature:4538585-4540482:1:exon

position:4465173:1
position: 4465173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4465173-4465305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4475448-4478040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4489310-4489434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4492777-4493044:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4496757-4496866:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4500393-4500468:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4502151-4502269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4503128-4503271:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4510633-4510756:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4517290-4517490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4518235-4518414:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4519944-4520100:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4520471-4520676:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4522958-4523070:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4524722-4524991:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4525544-4525660:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4527605-4527746:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4534451-4534557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4536642-4536846:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4538585-4540482:1:exon

Nsd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Nsd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase, H3 lysine-36 specific isoform X2
translation: MFEGRHQFEELPVLRKRGKQKEKGYRHKVPQKILSQWEASVGLAEQYDVPRGSKTRKCVNTSIKLDSEEDMPFEDCTNDPESEHELLLNGCLKSLDFDSEHSADEKEKPCAKSRARKNSDNPKRTSVKKGPMQFESNNEERRGKIPDSFGLNFISGDISDKQASNELSRMANSLTGSSTAPGSFLFSSCGKNTSKKEYETSNCDSLVDLSEGTLLSKRVGEKKKLQPGLVCSSKVQLCYIGAGNEEKQSDSISICTTSDEGSSDLDATDQSSESDDSVVEITDSFDRTENMLSMQKNEKLKHSRYPSKNSSVKEKQKSVITNSHTNHLVDCTKTAEPETEMSQVNLSDLNMSTLVHKPQIDFRNDGLSPKFNTPASIPSENSLIKDRGTSQLLLHSKSKQPKFRNIKYKHKSPVVVEPQVTNEDHNLKYCSSESKGSPLASIPKSGKVDGIKLLNNMHEKTRDSNDIETAVVKHVLSELKELSYRSLNEDISDSVTSKPSKPLLFSSASSQNHMPIESDYKFSTLLMMLKDMHDSKTKEQRLMTAQSMAPYRSPGGGDSSTTSAVVASKVLISGSSTQIQEKNGDGSQDSGRPSPGGGDSLSEELSASLPSLASDKGDLPAPGKSRSNCVTRRHCGGMKPSSKLREAFSAQIVRNSSKQKVLKTERKRKVHRKVHRLPAVRLPTVTGEVTLEGDKESESTVNGPSRGGAEDLAKEPLQLMGHLTSEEAHLSDAHFDNKVQQPDPDKIPEKGHSFEDKKGPELDSEMNNENVETIGVHLVVPKKRWQPLNQRRTKPGKRTNRLREKENSEGVFGVLLPADPAVPKELDECPERRTPPATNIIEDPLTDPNEASHSDSVGPPVNLSDKSRTSMEDVEKEPGIPSLTPQAELPEPAVPLEKKRLRKPSKWLLEYTEEYDQIFAPKKKQKKVQEQVHKVSSHCEEENLGRCRANVQNKQVDENCLISTKEEPPVLEREAPFLEGPLAHSDLGGGHAELPQLTLSVPVAQEVSPQLALESEDLVVKTPGNYESKRQRKPTKKLLESNDLDPGFMPKKGDLGLSRKCYEAVRLGNGISDSCTGAHLKDFGGGTTKIFDKPRKRKRQRHVTAKMQCKRVKIEDSSKETPSSEGELMTHRTAASPKETVEEGVEQDSGMAASKKLQVERGGGAALKENVCQNCEKLGELLLCEAQCCGAFHLECLGLTEMPRGKFICNECRTGIHTCFVCKQSGEDVKRCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHMCITCHAANPASVSASKGRLMRCVRCPVAYHANDFCLAAGSKILASNSIICPNHFTPRRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNIDIPEGNWYCNDCKAGKKPHYREIVWVKVGRYRWWPAEICHPRAIPSNIDKMRHDVGEFPVLFFGSNDYLWTHQARVFPYMEGDVSSKDKMGKGVDGTYKKALQEAAARFEELKAQKELRQLQEDRKNDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSECINRMLLYECHPTVCPAGGRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRHAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLGVRPKNQPIATEEKSKRFKKKQQGKRRSQGEVTKEREDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRPAGKWECPWHQCDVCGKEAASFCEMCPSSFCKQHREGMLFISKLDGRLSCTEHDPCGPNPLEPGEIREYVPPSVPLSPSSHLAEPSSEMAAQGSKMSDKSSAGTNQMLPPSKKSSAGTCQRPVLPERPLERTGSGSQLLDRVRELAGTGTKSQPLLSNQRPPDRPPAMERPRPQLTDKPLSVTSPSPSPTARPQPLERPLRKTDPKLEKSIGAASPRLPSLE…
SIO_010081: Nsd1
subclass of: SO_0000673
so part of: Nsd1
location: join(4471977..4472060,4475448..4478040,4489310..4489434,4492777..4493044,4496757..4496866,4500393..4500468,4502151..4502269,4503128..4503271,4510633..4510756,4517290..4517490,4518235..4518414,4519944..4520100,4520471..4520676,4522958..4523070,4524722..4524991,4525544..4525660,4527605..4527746,4534451..4534557,4536642..4536846,4538585..4540197)
location: region:4471977-4540197:1
so has part: feature:4471977-4472060:1:exon
so has part: feature:4475448-4478040:1:exon
so has part: feature:4489310-4489434:1:exon
so has part: feature:4492777-4493044:1:exon
so has part: feature:4496757-4496866:1:exon
so has part: feature:4500393-4500468:1:exon
so has part: feature:4502151-4502269:1:exon
so has part: feature:4503128-4503271:1:exon
so has part: feature:4510633-4510756:1:exon
so has part: feature:4517290-4517490:1:exon
so has part: feature:4518235-4518414:1:exon
so has part: feature:4519944-4520100:1:exon
so has part: feature:4520471-4520676:1:exon
so has part: feature:4522958-4523070:1:exon
so has part: feature:4524722-4524991:1:exon
so has part: feature:4525544-4525660:1:exon
so has part: feature:4527605-4527746:1:exon
so has part: feature:4534451-4534557:1:exon
so has part: feature:4536642-4536846:1:exon
so has part: feature:4538585-4540197:1:exon

XP_048190060.1
type: Protein
SIO_000068: ncbiprotein

position:4471977:1
position: 4471977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4471977-4472060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4475448-4478040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4489310-4489434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4492777-4493044:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4496757-4496866:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4500393-4500468:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4502151-4502269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4503128-4503271:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4510633-4510756:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4517290-4517490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4518235-4518414:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4519944-4520100:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4520471-4520676:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4522958-4523070:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4524722-4524991:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4525544-4525660:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4527605-4527746:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4534451-4534557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4536642-4536846:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4538585-4540197:1:exon

Nsd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Nsd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase, H3 lysine-36 specific isoform X3
translation: MPFEDCTNDPESEHELLLNGCLKSLDFDSEHSADEKEKPCAKSRARKNSDNPKRTSVKKGPMQFESNNEERRGKIPDSFGLNFISGDISDKQASNELSRMANSLTGSSTAPGSFLFSSCGKNTSKKEYETSNCDSLVDLSEGTLLSKRVGEKKKLQPGLVCSSKVQLCYIGAGNEEKQSDSISICTTSDEGSSDLDATDQSSESDDSVVEITDSFDRTENMLSMQKNEKLKHSRYPSKNSSVKEKQKSVITNSHTNHLVDCTKTAEPETEMSQVNLSDLNMSTLVHKPQIDFRNDGLSPKFNTPASIPSENSLIKDRGTSQLLLHSKSKQPKFRNIKYKHKSPVVVEPQVTNEDHNLKYCSSESKGSPLASIPKSGKVDGIKLLNNMHEKTRDSNDIETAVVKHVLSELKELSYRSLNEDISDSVTSKPSKPLLFSSASSQNHMPIESDYKFSTLLMMLKDMHDSKTKEQRLMTAQSMAPYRSPGGGDSSTTSAVVASKVLISGSSTQIQEKNGDGSQDSGRPSPGGGDSLSEELSASLPSLASDKGDLPAPGKSRSNCVTRRHCGGMKPSSKLREAFSAQIVRNSSKQKVLKTERKRKVHRKVHRLPAVRLPTVTGEVTLEGDKESESTVNGPSRGGAEDLAKEPLQLMGHLTSEEAHLSDAHFDNKVQQPDPDKIPEKGHSFEDKKGPELDSEMNNENVETIGVHLVVPKKRWQPLNQRRTKPGKRTNRLREKENSEGVFGVLLPADPAVPKELDECPERRTPPATNIIEDPLTDPNEASHSDSVGPPVNLSDKSRTSMEDVEKEPGIPSLTPQAELPEPAVPLEKKRLRKPSKWLLEYTEEYDQIFAPKKKQKKVQEQVHKVSSHCEEENLGRCRANVQNKQVDENCLISTKEEPPVLEREAPFLEGPLAHSDLGGGHAELPQLTLSVPVAQEVSPQLALESEDLVVKTPGNYESKRQRKPTKKLLESNDLDPGFMPKKGDLGLSRKCYEAVRLGNGISDSCTGAHLKDFGGGTTKIFDKPRKRKRQRHVTAKMQCKRVKIEDSSKETPSSEGELMTHRTAASPKETVEEGVEQDSGMAASKKLQVERGGGAALKENVCQNCEKLGELLLCEAQCCGAFHLECLGLTEMPRGKFICNECRTGIHTCFVCKQSGEDVKRCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHMCITCHAANPASVSASKGRLMRCVRCPVAYHANDFCLAAGSKILASNSIICPNHFTPRRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNIDIPEGNWYCNDCKAGKKPHYREIVWVKVGRYRWWPAEICHPRAIPSNIDKMRHDVGEFPVLFFGSNDYLWTHQARVFPYMEGDVSSKDKMGKGVDGTYKKALQEAAARFEELKAQKELRQLQEDRKNDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSECINRMLLYECHPTVCPAGGRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRHAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLGVRPKNQPIATEEKSKRFKKKQQGKRRSQGEVTKEREDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRPAGKWECPWHQCDVCGKEAASFCEMCPSSFCKQHREGMLFISKLDGRLSCTEHDPCGPNPLEPGEIREYVPPSVPLSPSSHLAEPSSEMAAQGSKMSDKSSAGTNQMLPPSKKSSAGTCQRPVLPERPLERTGSGSQLLDRVRELAGTGTKSQPLLSNQRPPDRPPAMERPRPQLTDKPLSVTSPSPSPTARPQPLERPLRKTDPKLEKSIGAASPRLPSLEKTPAPAGLRLPQPDRLLATNSPKPQNPDKSHASLSQRLPPPEKVLSAVVQSLVAKEKALRPVDQNTQSKN…
SIO_010081: Nsd1
subclass of: SO_0000673
so part of: Nsd1
location: join(4475574..4478040,4489310..4489434,4492777..4493044,4496757..4496866,4500393..4500468,4502151..4502269,4503128..4503271,4510633..4510756,4517290..4517490,4518235..4518414,4519944..4520100,4520471..4520676,4522958..4523070,4524722..4524991,4525544..4525660,4527605..4527746,4534451..4534557,4536642..4536846,4538585..4540197)
location: region:4475574-4540197:1
so has part: feature:4475574-4478040:1:exon
so has part: feature:4489310-4489434:1:exon
so has part: feature:4492777-4493044:1:exon
so has part: feature:4496757-4496866:1:exon
so has part: feature:4500393-4500468:1:exon
so has part: feature:4502151-4502269:1:exon
so has part: feature:4503128-4503271:1:exon
so has part: feature:4510633-4510756:1:exon
so has part: feature:4517290-4517490:1:exon
so has part: feature:4518235-4518414:1:exon
so has part: feature:4519944-4520100:1:exon
so has part: feature:4520471-4520676:1:exon
so has part: feature:4522958-4523070:1:exon
so has part: feature:4524722-4524991:1:exon
so has part: feature:4525544-4525660:1:exon
so has part: feature:4527605-4527746:1:exon
so has part: feature:4534451-4534557:1:exon
so has part: feature:4536642-4536846:1:exon
so has part: feature:4538585-4540197:1:exon

XP_048190061.1
type: Protein
SIO_000068: ncbiprotein

position:4475574:1
position: 4475574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4475574-4478040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4489310-4489434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4492777-4493044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4496757-4496866:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4500393-4500468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4502151-4502269:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4503128-4503271:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4510633-4510756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4517290-4517490:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4518235-4518414:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4519944-4520100:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4520471-4520676:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4522958-4523070:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4524722-4524991:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4525544-4525660:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4527605-4527746:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4534451-4534557:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4536642-4536846:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4538585-4540197:1:exon

LOC125342245
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125342245
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4508308..4508414)
location: region:4508308-4508414:-1
so has part: feature:4508308-4508414:-1:exon
subclass of: SO_0000623

125342245
type: Gene
SIO_000068: ncbigene

position:4508308:-1
position: 4508308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4508414:-1
position: 4508414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4508308-4508414:-1:exon

LOC125342245
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snRNA
gene: LOC125342245
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007209183.1
SIO_010081: LOC125342245
subclass of: SO_0000673
so part of: LOC125342245
location: complement(4508308..4508414)
location: region:4508308-4508414:-1
so has part: feature:4508308-4508414:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4508308-4508414:-1:exon

Rab24
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Rab24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4545825..4547521)
location: region:4545825-4547521:-1
so has part: feature:4545825-4547521:-1:exon
subclass of: SO_0000010

125341972
type: Gene
SIO_000068: ncbigene

position:4545825:-1
position: 4545825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4547521:-1
position: 4547521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4545825-4547521:-1:exon

Rab24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rab24
product: RAB24, member RAS oncogene family
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334110.1
SIO_010081: Rab24
subclass of: SO_0000673
so part of: Rab24
location: complement(join(4545825..4546146,4546237..4546299,4546390..4546440,4546618..4546717,4546789..4546856,4546984..4547062,4547212..4547280,4547348..4547521))
location: region:4545825-4547521:-1
so has part: feature:4547348-4547521:-1:exon
so has part: feature:4547212-4547280:-1:exon
so has part: feature:4546984-4547062:-1:exon
so has part: feature:4546789-4546856:-1:exon
so has part: feature:4546618-4546717:-1:exon
so has part: feature:4546390-4546440:-1:exon
so has part: feature:4546237-4546299:-1:exon
so has part: feature:4545825-4546146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4547348-4547521:-1:exon

position:4547348:-1
position: 4547348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4547212-4547280:-1:exon

position:4547212:-1
position: 4547212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4547280:-1
position: 4547280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4546984-4547062:-1:exon

position:4546984:-1
position: 4546984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4547062:-1
position: 4547062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4546789-4546856:-1:exon

position:4546789:-1
position: 4546789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4546856:-1
position: 4546856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4546618-4546717:-1:exon

position:4546618:-1
position: 4546618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4546717:-1
position: 4546717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4546390-4546440:-1:exon

position:4546390:-1
position: 4546390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4546440:-1
position: 4546440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4546237-4546299:-1:exon

position:4546237:-1
position: 4546237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4546299:-1
position: 4546299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4545825-4546146:-1:exon

position:4546146:-1
position: 4546146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rab24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rab24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-24
translation: MSGQRVDVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQNTIGAAFVAKVMSVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKELRSLEEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYAENIKAQLFETSSKTGQSVDELFQKVAEDYVSVADFQVMTEDKGVDLAQKANPYFYSCCHH
SIO_010081: Rab24
subclass of: SO_0000673
so part of: Rab24
location: complement(join(4546082..4546146,4546237..4546299,4546390..4546440,4546618..4546717,4546789..4546856,4546984..4547062,4547212..4547280,4547348..4547464))
location: region:4546082-4547464:-1
so has part: feature:4547348-4547464:-1:exon
so has part: feature:4547212-4547280:-1:exon
so has part: feature:4546984-4547062:-1:exon
so has part: feature:4546789-4546856:-1:exon
so has part: feature:4546618-4546717:-1:exon
so has part: feature:4546390-4546440:-1:exon
so has part: feature:4546237-4546299:-1:exon
so has part: feature:4546082-4546146:-1:exon

XP_048190067.1
type: Protein
SIO_000068: ncbiprotein

position:4546082:-1
position: 4546082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4547464:-1
position: 4547464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4547348-4547464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4547212-4547280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4546984-4547062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4546789-4546856:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4546618-4546717:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4546390-4546440:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4546237-4546299:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4546082-4546146:-1:exon

Prelid1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Prelid1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4547871..4551295
location: region:4547871-4551295:1
so has part: feature:4547871-4551295:1:exon
subclass of: SO_0000010

125341970
type: Gene
SIO_000068: ncbigene

position:4547871:1
position: 4547871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4551295:1
position: 4551295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4547871-4551295:1:exon

Prelid1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Prelid1
product: PRELI domain containing 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334108.1
SIO_010081: Prelid1
subclass of: SO_0000673
so part of: Prelid1
location: join(4547871..4548114,4548810..4549035,4550430..4550543,4550636..4550714,4550838..4551295)
location: region:4547871-4551295:1
so has part: feature:4547871-4548114:1:exon
so has part: feature:4548810-4549035:1:exon
so has part: feature:4550430-4550543:1:exon
so has part: feature:4550636-4550714:1:exon
so has part: feature:4550838-4551295:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4547871-4548114:1:exon

position:4548114:1
position: 4548114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4548810-4549035:1:exon

position:4548810:1
position: 4548810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4549035:1
position: 4549035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4550430-4550543:1:exon

position:4550430:1
position: 4550430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4550543:1
position: 4550543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4550636-4550714:1:exon

position:4550636:1
position: 4550636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4550714:1
position: 4550714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4550838-4551295:1:exon

position:4550838:1
position: 4550838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Prelid1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Prelid1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRELI domain-containing protein 1, mitochondrial
translation: MVKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTNRMPRWAERLFPANVAHSVYILEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNSDNNSWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKLQGEPPSRTFVETAKEAKEKAKETALAATEKAKDLANKAASKQQQPQQFV
SIO_010081: Prelid1
subclass of: SO_0000673
so part of: Prelid1
location: join(4548023..4548114,4548810..4549035,4550430..4550543,4550636..4550714,4550838..4550983)
location: region:4548023-4550983:1
so has part: feature:4548023-4548114:1:exon
so has part: feature:4548810-4549035:1:exon
so has part: feature:4550430-4550543:1:exon
so has part: feature:4550636-4550714:1:exon
so has part: feature:4550838-4550983:1:exon

XP_048190065.1
type: Protein
SIO_000068: ncbiprotein

position:4548023:1
position: 4548023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4550983:1
position: 4550983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4548023-4548114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4548810-4549035:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4550430-4550543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4550636-4550714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4550838-4550983:1:exon

Mxd3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Mxd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4551524..4556433)
location: region:4551524-4556433:-1
so has part: feature:4551524-4556433:-1:exon
subclass of: SO_0000010

125341971
type: Gene
SIO_000068: ncbigene

position:4551524:-1
position: 4551524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4556433:-1
position: 4556433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4551524-4556433:-1:exon

Mxd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Mxd3
product: MAX dimerization protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048334109.1
SIO_010081: Mxd3
subclass of: SO_0000673
so part of: Mxd3
location: complement(join(4551524..4551784,4551867..4552050,4554378..4554492,4554615..4554644,4555988..4556093,4556321..4556433))
location: region:4551524-4556433:-1
so has part: feature:4556321-4556433:-1:exon
so has part: feature:4555988-4556093:-1:exon
so has part: feature:4554615-4554644:-1:exon
so has part: feature:4554378-4554492:-1:exon
so has part: feature:4551867-4552050:-1:exon
so has part: feature:4551524-4551784:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4556321-4556433:-1:exon

position:4556321:-1
position: 4556321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4555988-4556093:-1:exon

position:4555988:-1
position: 4555988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4556093:-1
position: 4556093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4554615-4554644:-1:exon

position:4554615:-1
position: 4554615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4554644:-1
position: 4554644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4554378-4554492:-1:exon

position:4554378:-1
position: 4554378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4554492:-1
position: 4554492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4551867-4552050:-1:exon

position:4551867:-1
position: 4551867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4552050:-1
position: 4552050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4551524-4551784:-1:exon

position:4551784:-1
position: 4551784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mxd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Mxd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: max dimerization protein 3
translation: MEPVASSIQVLLQAAEFLERREREAEHGYASLCPHRSPGPVHGRRRRPLQAPGALDGGRSVHNELEKRRRAQLKRCLEQLKQQMPLGADCARFTTLSLLRRARTHIQKLEEQEQRARRLKEQLRSQQQSLRRRLEQLRGPAGAGEWERLRADSLDSSGLSSERSDSDQEELEVDVESLVFGGEAELLRGFSAGQEHSYSHRAGTWL
SIO_010081: Mxd3
subclass of: SO_0000673
so part of: Mxd3
location: complement(join(4551669..4551784,4551867..4552050,4554378..4554492,4554615..4554644,4555988..4556093,4556321..4556390))
location: region:4551669-4556390:-1
so has part: feature:4556321-4556390:-1:exon
so has part: feature:4555988-4556093:-1:exon
so has part: feature:4554615-4554644:-1:exon
so has part: feature:4554378-4554492:-1:exon
so has part: feature:4551867-4552050:-1:exon
so has part: feature:4551669-4551784:-1:exon

XP_048190066.1
type: Protein
SIO_000068: ncbiprotein

position:4551669:-1
position: 4551669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4556390:-1
position: 4556390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4556321-4556390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4555988-4556093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4554615-4554644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4554378-4554492:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4551867-4552050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4551669-4551784:-1:exon

Lman2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Lman2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4561971..4572907)
location: region:4561971-4572907:-1
so has part: feature:4561971-4572907:-1:exon
subclass of: SO_0000010

125341969
type: Gene
SIO_000068: ncbigene

position:4561971:-1
position: 4561971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4572907:-1
position: 4572907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4561971-4572907:-1:exon

Lman2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Lman2
product: lectin, mannose binding 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334107.1
SIO_010081: Lman2
subclass of: SO_0000673
so part of: Lman2
location: complement(join(4561971..4562271,4563376..4563495,4564415..4564529,4564612..4564773,4564947..4565026,4565273..4565390,4572277..4572395,4572642..4572907))
location: region:4561971-4572907:-1
so has part: feature:4572642-4572907:-1:exon
so has part: feature:4572277-4572395:-1:exon
so has part: feature:4565273-4565390:-1:exon
so has part: feature:4564947-4565026:-1:exon
so has part: feature:4564612-4564773:-1:exon
so has part: feature:4564415-4564529:-1:exon
so has part: feature:4563376-4563495:-1:exon
so has part: feature:4561971-4562271:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4572642-4572907:-1:exon

position:4572642:-1
position: 4572642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4572277-4572395:-1:exon

position:4572277:-1
position: 4572277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4572395:-1
position: 4572395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4565273-4565390:-1:exon

position:4565273:-1
position: 4565273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4565390:-1
position: 4565390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4564947-4565026:-1:exon

position:4564947:-1
position: 4564947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4565026:-1
position: 4565026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4564612-4564773:-1:exon

position:4564612:-1
position: 4564612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4564773:-1
position: 4564773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4564415-4564529:-1:exon

position:4564415:-1
position: 4564415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4564529:-1
position: 4564529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4563376-4563495:-1:exon

position:4563376:-1
position: 4563376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4563495:-1
position: 4563495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4561971-4562271:-1:exon

position:4562271:-1
position: 4562271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Lman2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Lman2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicular integral-membrane protein VIP36
translation: MAAERWFWCWGWGQRCPGRPGLPGPGPGPATLLHFLLLLGSVAADITDGNSEHLKREHSLIKPYQGVGSSSMPLWDFQGSTMLTSQYVRLTPDERSKEGSIWNHQPCFLKDWEMHVHFKVHGTGKKNLHGDGIALWYTRDRLVPGPVFGSKDNFHGLAVFLDTYPNDETTERVFPYVSVMVNNGSLSYDHSKDGRWTELAGCTADFRNRDHDTFLAVRYSRGRLTVMTDLEDRNEWKNCIDLTGVRLPTGYYFGASAGTGDLSDNHDIISIKLFQLMVEHTPDEENIDWTKIEPGVNFLRSPKDNVDDPTGNFRGGPLTGWRVFLLLLCALLGIIVCAVVGAVVFQKRQERNKRFY
SIO_010081: Lman2
subclass of: SO_0000673
so part of: Lman2
location: complement(join(4562111..4562271,4563376..4563495,4564415..4564529,4564612..4564773,4564947..4565026,4565273..4565390,4572277..4572395,4572642..4572837))
location: region:4562111-4572837:-1
so has part: feature:4572642-4572837:-1:exon
so has part: feature:4572277-4572395:-1:exon
so has part: feature:4565273-4565390:-1:exon
so has part: feature:4564947-4565026:-1:exon
so has part: feature:4564612-4564773:-1:exon
so has part: feature:4564415-4564529:-1:exon
so has part: feature:4563376-4563495:-1:exon
so has part: feature:4562111-4562271:-1:exon

XP_048190064.1
type: Protein
SIO_000068: ncbiprotein

position:4562111:-1
position: 4562111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4572837:-1
position: 4572837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4572642-4572837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4572277-4572395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4565273-4565390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4564947-4565026:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4564612-4564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4564415-4564529:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4563376-4563495:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4562111-4562271:-1:exon

Rgs14
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Rgs14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4579301..4592776
location: region:4579301-4592776:1
so has part: feature:4579301-4592776:1:exon
subclass of: SO_0000010

125341974
type: Gene
SIO_000068: ncbigene

position:4579301:1
position: 4579301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4592776:1
position: 4592776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4579301-4592776:1:exon

Rgs14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rgs14
product: regulator of G protein signaling 14
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_048334111.1
SIO_010081: Rgs14
subclass of: SO_0000673
so part of: Rgs14
location: join(4579301..4579506,4586072..4586093,4586229..4586404,4586742..4586834,4586919..4587062,4587640..4587783,4587942..4588053,4588312..4588421,4588768..4588977,4590636..4590712,4590989..4591115,4591201..4591282,4591374..4591623,4592112..4592776)
location: region:4579301-4592776:1
so has part: feature:4579301-4579506:1:exon
so has part: feature:4586072-4586093:1:exon
so has part: feature:4586229-4586404:1:exon
so has part: feature:4586742-4586834:1:exon
so has part: feature:4586919-4587062:1:exon
so has part: feature:4587640-4587783:1:exon
so has part: feature:4587942-4588053:1:exon
so has part: feature:4588312-4588421:1:exon
so has part: feature:4588768-4588977:1:exon
so has part: feature:4590636-4590712:1:exon
so has part: feature:4590989-4591115:1:exon
so has part: feature:4591201-4591282:1:exon
so has part: feature:4591374-4591623:1:exon
so has part: feature:4592112-4592776:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4579301-4579506:1:exon

position:4579506:1
position: 4579506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4586072-4586093:1:exon

position:4586072:1
position: 4586072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4586093:1
position: 4586093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4586229-4586404:1:exon

position:4586229:1
position: 4586229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4586404:1
position: 4586404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4586742-4586834:1:exon

position:4586742:1
position: 4586742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4586834:1
position: 4586834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4586919-4587062:1:exon

position:4586919:1
position: 4586919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4587062:1
position: 4587062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4587640-4587783:1:exon

position:4587640:1
position: 4587640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4587783:1
position: 4587783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4587942-4588053:1:exon

position:4587942:1
position: 4587942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4588053:1
position: 4588053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4588312-4588421:1:exon

position:4588312:1
position: 4588312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4588421:1
position: 4588421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4588768-4588977:1:exon

position:4588768:1
position: 4588768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4588977:1
position: 4588977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4590636-4590712:1:exon

position:4590636:1
position: 4590636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4590712:1
position: 4590712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4590989-4591115:1:exon

position:4590989:1
position: 4590989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4591115:1
position: 4591115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4591201-4591282:1:exon

position:4591201:1
position: 4591201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4591282:1
position: 4591282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4591374-4591623:1:exon

position:4591374:1
position: 4591374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4591623:1
position: 4591623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4592112-4592776:1:exon

position:4592112:1
position: 4592112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rgs14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rgs14
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: regulator of G-protein signaling 14
translation: MISGGMPGKPKHLGVPNGRMVLAVSDGELSSATGSQSQNEGRGSSLSIHSLPSGPSSPFPEEQPVASWALSFERLLQDPLGLAYFTEFLKKEFSAENVTFWKACERFQQIPASDTQQLAQEARNIYQEFLSSQALSPVNIDRQAWLGEEVLAQPRPDMFRAQQLQIFNLMKFDSYARFVKSPLYRECLLAEAEGRPLREPGSSRLGSPDTARKKPKLKPGKSLPLGVEELGQLPAAEGAGGRPLRKSFRRELTGGTSSLALRRESQGSLNSSASLDLGFLAFANRSENQSHRKSLGSTEGDSESRPGKYCCVYLPDGTASLALARPGLTIRDMLAGICEKRGLSLPDIKVYLMGNEQKALVLDQDCTVLADQEVRLETRVTFELELSTLERVVRIAAKPTKRLQEALQPILGKHGLSLEQVALHRPGEKQPLDLEKLVSSVSGQRLILDTLPGVKIRDASHMASCSSSRCAGVLGCLLPPAAFTAPPDCGSDPILLQGCPSRTQNKATHASSLPPSSLVEVPSSSADKRQTFDIEGLVELLNRVQSSGAHDQRGLLRKEDLVLPEFLQLPAPRPSSQETLPQTEPAAQPKRGSGSSTAHSAL
SIO_010081: Rgs14
subclass of: SO_0000673
so part of: Rgs14
location: join(4579447..4579506,4586072..4586093,4586229..4586404,4586742..4586834,4586919..4587062,4587640..4587783,4587942..4588053,4588312..4588421,4588768..4588977,4590636..4590712,4590989..4591115,4591201..4591282,4591374..4591623,4592112..4592314)
location: region:4579447-4592314:1
so has part: feature:4579447-4579506:1:exon
so has part: feature:4586072-4586093:1:exon
so has part: feature:4586229-4586404:1:exon
so has part: feature:4586742-4586834:1:exon
so has part: feature:4586919-4587062:1:exon
so has part: feature:4587640-4587783:1:exon
so has part: feature:4587942-4588053:1:exon
so has part: feature:4588312-4588421:1:exon
so has part: feature:4588768-4588977:1:exon
so has part: feature:4590636-4590712:1:exon
so has part: feature:4590989-4591115:1:exon
so has part: feature:4591201-4591282:1:exon
so has part: feature:4591374-4591623:1:exon
so has part: feature:4592112-4592314:1:exon

XP_048190068.1
type: Protein
SIO_000068: ncbiprotein

position:4579447:1
position: 4579447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4592314:1
position: 4592314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4579447-4579506:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4586072-4586093:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4586229-4586404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4586742-4586834:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4586919-4587062:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4587640-4587783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4587942-4588053:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4588312-4588421:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4588768-4588977:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4590636-4590712:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4590989-4591115:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4591201-4591282:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4591374-4591623:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4592112-4592314:1:exon

Slc34a1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Slc34a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4599965..4614081
location: region:4599965-4614081:1
so has part: feature:4599965-4614081:1:exon
subclass of: SO_0000010

125341957
type: Gene
SIO_000068: ncbigene

position:4599965:1
position: 4599965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4614081:1
position: 4614081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4599965-4614081:1:exon

Slc34a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slc34a1
product: solute carrier family 34 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048334091.1
SIO_010081: Slc34a1
subclass of: SO_0000673
so part of: Slc34a1
location: join(4599965..4600091,4601657..4601773,4601891..4602058,4602129..4602257,4602333..4602476,4603709..4603820,4603972..4604167,4604257..4604352,4610779..4610842,4611080..4611247,4611782..4611898,4611990..4612114,4613477..4614081)
location: region:4599965-4614081:1
so has part: feature:4599965-4600091:1:exon
so has part: feature:4601657-4601773:1:exon
so has part: feature:4601891-4602058:1:exon
so has part: feature:4602129-4602257:1:exon
so has part: feature:4602333-4602476:1:exon
so has part: feature:4603709-4603820:1:exon
so has part: feature:4603972-4604167:1:exon
so has part: feature:4604257-4604352:1:exon
so has part: feature:4610779-4610842:1:exon
so has part: feature:4611080-4611247:1:exon
so has part: feature:4611782-4611898:1:exon
so has part: feature:4611990-4612114:1:exon
so has part: feature:4613477-4614081:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4599965-4600091:1:exon

position:4600091:1
position: 4600091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4601657-4601773:1:exon

position:4601657:1
position: 4601657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4601773:1
position: 4601773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4601891-4602058:1:exon

position:4601891:1
position: 4601891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4602058:1
position: 4602058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4602129-4602257:1:exon

position:4602129:1
position: 4602129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4602257:1
position: 4602257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4602333-4602476:1:exon

position:4602333:1
position: 4602333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4602476:1
position: 4602476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4603709-4603820:1:exon

position:4603709:1
position: 4603709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4603820:1
position: 4603820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4603972-4604167:1:exon

position:4603972:1
position: 4603972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4604167:1
position: 4604167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4604257-4604352:1:exon

position:4604257:1
position: 4604257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4604352:1
position: 4604352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4610779-4610842:1:exon

position:4610779:1
position: 4610779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4610842:1
position: 4610842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4611080-4611247:1:exon

position:4611080:1
position: 4611080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4611247:1
position: 4611247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4611782-4611898:1:exon

position:4611782:1
position: 4611782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4611898:1
position: 4611898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4611990-4612114:1:exon

position:4611990:1
position: 4611990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4612114:1
position: 4612114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4613477-4614081:1:exon

position:4613477:1
position: 4613477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slc34a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slc34a1
product: solute carrier family 34 member 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048334092.1
SIO_010081: Slc34a1
subclass of: SO_0000673
so part of: Slc34a1
location: join(4601657..4601773,4601891..4602058,4602129..4602257,4602333..4602476,4603709..4603820,4603972..4604167,4604257..4604361,4610780..4610842,4611080..4611179)
location: region:4601657-4611179:1
so has part: feature:4601657-4601773:1:exon
so has part: feature:4601891-4602058:1:exon
so has part: feature:4602129-4602257:1:exon
so has part: feature:4602333-4602476:1:exon
so has part: feature:4603709-4603820:1:exon
so has part: feature:4603972-4604167:1:exon
so has part: feature:4604257-4604361:1:exon
so has part: feature:4610780-4610842:1:exon
so has part: feature:4611080-4611179:1:exon

position:4611179:1
position: 4611179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4601657-4601773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4601891-4602058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4602129-4602257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4602333-4602476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4603709-4603820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4603972-4604167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4604257-4604361:1:exon

position:4604361:1
position: 4604361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4610780-4610842:1:exon

position:4610780:1
position: 4610780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4611080-4611179:1:exon

Slc34a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slc34a1
product: solute carrier family 34 member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048334093.1
SIO_010081: Slc34a1
subclass of: SO_0000673
so part of: Slc34a1
location: join(4601657..4601773,4601891..4602058,4602129..4602257,4602333..4602476,4603709..4603820,4603972..4604167,4604257..4604352,4605108..4605240)
location: region:4601657-4605240:1
so has part: feature:4601657-4601773:1:exon
so has part: feature:4601891-4602058:1:exon
so has part: feature:4602129-4602257:1:exon
so has part: feature:4602333-4602476:1:exon
so has part: feature:4603709-4603820:1:exon
so has part: feature:4603972-4604167:1:exon
so has part: feature:4604257-4604352:1:exon
so has part: feature:4605108-4605240:1:exon

position:4605240:1
position: 4605240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4601657-4601773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4601891-4602058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4602129-4602257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4602333-4602476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4603709-4603820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4603972-4604167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4604257-4604352:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4605108-4605240:1:exon

position:4605108:1
position: 4605108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slc34a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slc34a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transport protein 2A isoform X1
translation: MMSYGERLGGPAVSPLPVRGGHVVHGPAFAYVPSPQVLHRIPGTSAYAFPSLGPVTLTEHSCPCGEGLEHHDPFPAKLVLEEEQKPGSTQAREPKLAQKLRQGIATLIKVPLMLVLLYLFVCSLDVLSSAFQLAGGKVAGDIFKDNAILSNPVAGLVVGILVTVLVQSSSTSTSIIVSMVSSGLLEVSSAIPIIMGSNIGTSVTNTIVALMQAGDRTDFRRAFAGATVHDCFNWLSVLVLLPLEAATSYLDHITGLVVASFNIRGGQDAPDLLKIITEPFTKLVIQLDKSVINSIATGDESLRNHSLIRIWCYPDSIEASMSRVEANSSQALRNVTMEKCKHIFVNTGLPDLAVGLILLAGSLVLLCTCLILLVKMLNSSLKGQVAKVIQKVINTDLPSPFTWVTGYFAMVVGASMTFVVQSSSVFTSAITPLIGLGVISIERAYPLTLGSNIGTTTTAILAALASPREKLSSSFQIALCHFFFNISGILLWYPLPCMRLPIRMAKALGKLTAKYRWFAVLYLLVCFLLLPSLVFGISMAGWQAMVGVGAPFGALLAFVVLVNILQNRSPGHLPKWLQSWDFLPLWMHSLQPLDRLITRATLCYARPEPRSPQLPTRVFLEELPPATSSPRLAMSAHHNATRL
SIO_010081: Slc34a1
subclass of: SO_0000673
so part of: Slc34a1
location: join(4601665..4601773,4601891..4602058,4602129..4602257,4602333..4602476,4603709..4603820,4603972..4604167,4604257..4604352,4610779..4610842,4611080..4611247,4611782..4611898,4611990..4612114,4613477..4613980)
location: region:4601665-4613980:1
so has part: feature:4601665-4601773:1:exon
so has part: feature:4601891-4602058:1:exon
so has part: feature:4602129-4602257:1:exon
so has part: feature:4602333-4602476:1:exon
so has part: feature:4603709-4603820:1:exon
so has part: feature:4603972-4604167:1:exon
so has part: feature:4604257-4604352:1:exon
so has part: feature:4610779-4610842:1:exon
so has part: feature:4611080-4611247:1:exon
so has part: feature:4611782-4611898:1:exon
so has part: feature:4611990-4612114:1:exon
so has part: feature:4613477-4613980:1:exon

XP_048190048.1
type: Protein
SIO_000068: ncbiprotein

position:4601665:1
position: 4601665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4613980:1
position: 4613980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4601665-4601773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4601891-4602058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4602129-4602257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4602333-4602476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4603709-4603820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4603972-4604167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4604257-4604352:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4610779-4610842:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4611080-4611247:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4611782-4611898:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4611990-4612114:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4613477-4613980:1:exon

Slc34a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slc34a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transport protein 2A isoform X2
translation: MMSYGERLGGPAVSPLPVRGGHVVHGPAFAYVPSPQVLHRIPGTSAYAFPSLGPVTLTEHSCPCGEGLEHHDPFPAKLVLEEEQKPGSTQAREPKLAQKLRQGIATLIKVPLMLVLLYLFVCSLDVLSSAFQLAGGKVAGDIFKDNAILSNPVAGLVVGILVTVLVQSSSTSTSIIVSMVSSGLLEVSSAIPIIMGSNIGTSVTNTIVALMQAGDRTDFRRAFAGATVHDCFNWLSVLVLLPLEAATSYLDHITGLVVASFNIRGGQDAPDLLKIITEPFTKLVIQLDKSVINSIATGDESLRNHSLIRIWCYPDSIEVNPRPCPGWKPTPARPSEMSPWRNANTSS
SIO_010081: Slc34a1
subclass of: SO_0000673
so part of: Slc34a1
location: join(4601665..4601773,4601891..4602058,4602129..4602257,4602333..4602476,4603709..4603820,4603972..4604167,4604257..4604361,4610780..4610842,4611080..4611097)
location: region:4601665-4611097:1
so has part: feature:4601665-4601773:1:exon
so has part: feature:4601891-4602058:1:exon
so has part: feature:4602129-4602257:1:exon
so has part: feature:4602333-4602476:1:exon
so has part: feature:4603709-4603820:1:exon
so has part: feature:4603972-4604167:1:exon
so has part: feature:4604257-4604361:1:exon
so has part: feature:4610780-4610842:1:exon
so has part: feature:4611080-4611097:1:exon

XP_048190049.1
type: Protein
SIO_000068: ncbiprotein

position:4611097:1
position: 4611097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4601665-4601773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4601891-4602058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4602129-4602257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4602333-4602476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4603709-4603820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4603972-4604167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4604257-4604361:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4610780-4610842:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4611080-4611097:1:exon

Slc34a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slc34a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transport protein 2A isoform X3
translation: MMSYGERLGGPAVSPLPVRGGHVVHGPAFAYVPSPQVLHRIPGTSAYAFPSLGPVTLTEHSCPCGEGLEHHDPFPAKLVLEEEQKPGSTQAREPKLAQKLRQGIATLIKVPLMLVLLYLFVCSLDVLSSAFQLAGGKVAGDIFKDNAILSNPVAGLVVGILVTVLVQSSSTSTSIIVSMVSSGLLEVSSAIPIIMGSNIGTSVTNTIVALMQAGDRTDFRRAFAGATVHDCFNWLSVLVLLPLEAATSYLDHITGLVVASFNIRGGQDAPDLLKIITEPFTKLVIQLDKSVINSIATGDESLRNHSLIRIWCYPDSIEADITNQLQFVCN
SIO_010081: Slc34a1
subclass of: SO_0000673
so part of: Slc34a1
location: join(4601665..4601773,4601891..4602058,4602129..4602257,4602333..4602476,4603709..4603820,4603972..4604167,4604257..4604352,4605108..4605146)
location: region:4601665-4605146:1
so has part: feature:4601665-4601773:1:exon
so has part: feature:4601891-4602058:1:exon
so has part: feature:4602129-4602257:1:exon
so has part: feature:4602333-4602476:1:exon
so has part: feature:4603709-4603820:1:exon
so has part: feature:4603972-4604167:1:exon
so has part: feature:4604257-4604352:1:exon
so has part: feature:4605108-4605146:1:exon

XP_048190050.1
type: Protein
SIO_000068: ncbiprotein

position:4605146:1
position: 4605146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4601665-4601773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4601891-4602058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4602129-4602257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4602333-4602476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4603709-4603820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4603972-4604167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4604257-4604352:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4605108-4605146:1:exon

Pfn3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Pfn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4615654..4616088)
location: region:4615654-4616088:-1
so has part: feature:4615654-4616088:-1:exon
subclass of: SO_0000010

125341774
type: Gene
SIO_000068: ncbigene

position:4615654:-1
position: 4615654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4616088:-1
position: 4616088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4615654-4616088:-1:exon

Pfn3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pfn3
product: profilin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048333868.1
SIO_010081: Pfn3
subclass of: SO_0000673
so part of: Pfn3
location: complement(4615654..4616088)
location: region:4615654-4616088:-1
so has part: feature:4615654-4616088:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4615654-4616088:-1:exon

Pfn3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pfn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: profilin-3
translation: MGDWKGYISAVLRDQRIDDVAIVGHSDNRCVWASRPGGLLAAISPQEVGVLTGPDRESFLHAGLSVAGRRCCVIRDFLLADGDGVLDARTKGLDGRAVCVGHAPRALLVLLGRRGVHGGVLNKTAHDLIRGLGVQSG
SIO_010081: Pfn3
subclass of: SO_0000673
so part of: Pfn3
location: complement(4615654..4616067)
location: region:4615654-4616067:-1
so has part: feature:4615654-4616067:-1:exon

XP_048189825.1
type: Protein
SIO_000068: ncbiprotein

position:4616067:-1
position: 4616067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4615654-4616067:-1:exon

F12
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: F12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4618519..4626995)
location: region:4618519-4626995:-1
so has part: feature:4618519-4626995:-1:exon
subclass of: SO_0000010

125341958
type: Gene
SIO_000068: ncbigene

position:4618519:-1
position: 4618519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4626995:-1
position: 4626995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4618519-4626995:-1:exon

F12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: F12
product: coagulation factor XII
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048334094.1
SIO_010081: F12
subclass of: SO_0000673
so part of: F12
location: complement(join(4618519..4618767,4618854..4619002,4620486..4620635,4620753..4620889,4621004..4621267,4621305..4621496,4621602..4621767,4621857..4621961,4622054..4622185,4622264..4622374,4623373..4623443,4623593..4623711,4626600..4626638,4626939..4626995))
location: region:4618519-4626995:-1
so has part: feature:4626939-4626995:-1:exon
so has part: feature:4626600-4626638:-1:exon
so has part: feature:4623593-4623711:-1:exon
so has part: feature:4623373-4623443:-1:exon
so has part: feature:4622264-4622374:-1:exon
so has part: feature:4622054-4622185:-1:exon
so has part: feature:4621857-4621961:-1:exon
so has part: feature:4621602-4621767:-1:exon
so has part: feature:4621305-4621496:-1:exon
so has part: feature:4621004-4621267:-1:exon
so has part: feature:4620753-4620889:-1:exon
so has part: feature:4620486-4620635:-1:exon
so has part: feature:4618854-4619002:-1:exon
so has part: feature:4618519-4618767:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4626939-4626995:-1:exon

position:4626939:-1
position: 4626939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4626600-4626638:-1:exon

position:4626600:-1
position: 4626600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4626638:-1
position: 4626638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4623593-4623711:-1:exon

position:4623593:-1
position: 4623593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4623711:-1
position: 4623711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4623373-4623443:-1:exon

position:4623373:-1
position: 4623373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4623443:-1
position: 4623443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4622264-4622374:-1:exon

position:4622264:-1
position: 4622264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4622374:-1
position: 4622374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4622054-4622185:-1:exon

position:4622054:-1
position: 4622054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4622185:-1
position: 4622185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4621857-4621961:-1:exon

position:4621857:-1
position: 4621857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4621961:-1
position: 4621961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4621602-4621767:-1:exon

position:4621602:-1
position: 4621602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4621767:-1
position: 4621767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4621305-4621496:-1:exon

position:4621305:-1
position: 4621305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4621496:-1
position: 4621496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4621004-4621267:-1:exon

position:4621004:-1
position: 4621004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4621267:-1
position: 4621267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4620753-4620889:-1:exon

position:4620753:-1
position: 4620753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4620889:-1
position: 4620889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4620486-4620635:-1:exon

position:4620486:-1
position: 4620486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4620635:-1
position: 4620635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4618854-4619002:-1:exon

position:4618854:-1
position: 4618854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4619002:-1
position: 4619002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4618519-4618767:-1:exon

position:4618767:-1
position: 4618767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

F12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: F12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor XII
translation: MRAVLLLGSLLVGLESVLSTPPRKAPKEFKLGRVHYPTAVTVSGKPCHFPFQYHRRLYHSCIHRGQPGHQPWCATTPNFDQDREWGYCLEPKKVKDHCSKHNPCHRGGTCVNLPSGPYCLCPEPLTGKHCQKEKCFEPQLLRFFHEHDTWLRAEPAGVVRCQCKGPETHCRPLASQACSSNPCLNGGHCLEAEGHPLCQCPAGYSGPFCELDKEVKCYQGRGLSYRGLAQTTVSGAPCQRWSSEATFQNVTGQQALSWGLGHHAFCRNPDNDTRPWCFIWSGDRLSWEYCDLAPCPSPSEVPLGRQDLPVPRPSALAEPLPTTGDAHQSQEAGLPPGCSAWCSRSASSSQPALPRVGSLACGQRFRKHLSPLSRVVGGLVALPGAHPYIAALYWGHNFCAGSLIHPCWVLTAAHCLQDRPAPEELSVVLGQDRHNQSCEQCQTLAVRSYRLHEAFSSVTYQHDLALLRLQEGADGHCAHLSPFVQPVCLPSGPAPPSEAQASLCEVAGWGHQFEGAEEYATFLQEAQVPFISLERCSAPRVHGDAILPGMLCAGFLEGGTDACQGDSGGPLVCEDEAAESRLTLRGIISWGSGCGDRNKPGVYTDVSSYLAWIQEHTAS
SIO_010081: F12
subclass of: SO_0000673
so part of: F12
location: complement(join(4618600..4618767,4618854..4619002,4620486..4620635,4620753..4620889,4621004..4621267,4621305..4621496,4621602..4621767,4621857..4621961,4622054..4622185,4622264..4622374,4623373..4623443,4623593..4623711,4626600..4626638,4626939..4626995))
location: region:4618600-4626995:-1
so has part: feature:4626939-4626995:-1:exon
so has part: feature:4626600-4626638:-1:exon
so has part: feature:4623593-4623711:-1:exon
so has part: feature:4623373-4623443:-1:exon
so has part: feature:4622264-4622374:-1:exon
so has part: feature:4622054-4622185:-1:exon
so has part: feature:4621857-4621961:-1:exon
so has part: feature:4621602-4621767:-1:exon
so has part: feature:4621305-4621496:-1:exon
so has part: feature:4621004-4621267:-1:exon
so has part: feature:4620753-4620889:-1:exon
so has part: feature:4620486-4620635:-1:exon
so has part: feature:4618854-4619002:-1:exon
so has part: feature:4618600-4618767:-1:exon

XP_048190051.1
type: Protein
SIO_000068: ncbiprotein

position:4618600:-1
position: 4618600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4626939-4626995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4626600-4626638:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4623593-4623711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4623373-4623443:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4622264-4622374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4622054-4622185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4621857-4621961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4621602-4621767:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4621305-4621496:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4621004-4621267:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4620753-4620889:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4620486-4620635:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4618854-4619002:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4618600-4618767:-1:exon

Grk6
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Grk6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4637618..4656104
location: region:4637618-4656104:1
so has part: feature:4637618-4656104:1:exon
subclass of: SO_0000010

125341987
type: Gene
SIO_000068: ncbigene

position:4637618:1
position: 4637618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4656104:1
position: 4656104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4637618-4656104:1:exon

Grk6
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 214514
gene: Grk6
product: G protein-coupled receptor kinase 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_007209120.1
SIO_010081: Grk6
so part of: Grk6
location: join(4637618..4637808,4642314..4642409,4643368..4643480,4643626..4643703,4643912..4644012,4644272..4644364,4644857..4644920,4645043..4645183,4645444..4645634,4646577..4646614,4646690..4646779,4648822..4649030,4649144..4649281,4654071..4654208,4654288..4654422,4655189..4655441,4655542..4656104)
location: region:4637618-4656104:1
so has part: feature:4637618-4637808:1:exon
so has part: feature:4642314-4642409:1:exon
so has part: feature:4643368-4643480:1:exon
so has part: feature:4643626-4643703:1:exon
so has part: feature:4643912-4644012:1:exon
so has part: feature:4644272-4644364:1:exon
so has part: feature:4644857-4644920:1:exon
so has part: feature:4645043-4645183:1:exon
so has part: feature:4645444-4645634:1:exon
so has part: feature:4646577-4646614:1:exon
so has part: feature:4646690-4646779:1:exon
so has part: feature:4648822-4649030:1:exon
so has part: feature:4649144-4649281:1:exon
so has part: feature:4654071-4654208:1:exon
so has part: feature:4654288-4654422:1:exon
so has part: feature:4655189-4655441:1:exon
so has part: feature:4655542-4656104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4637618-4637808:1:exon

position:4637808:1
position: 4637808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4642314-4642409:1:exon

position:4642314:1
position: 4642314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4642409:1
position: 4642409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4643368-4643480:1:exon

position:4643368:1
position: 4643368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4643480:1
position: 4643480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4643626-4643703:1:exon

position:4643626:1
position: 4643626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4643703:1
position: 4643703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4643912-4644012:1:exon

position:4643912:1
position: 4643912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4644012:1
position: 4644012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4644272-4644364:1:exon

position:4644272:1
position: 4644272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4644364:1
position: 4644364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4644857-4644920:1:exon

position:4644857:1
position: 4644857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4644920:1
position: 4644920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4645043-4645183:1:exon

position:4645043:1
position: 4645043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4645183:1
position: 4645183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4645444-4645634:1:exon

position:4645444:1
position: 4645444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4645634:1
position: 4645634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4646577-4646614:1:exon

position:4646577:1
position: 4646577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4646614:1
position: 4646614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4646690-4646779:1:exon

position:4646690:1
position: 4646690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4646779:1
position: 4646779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4648822-4649030:1:exon

position:4648822:1
position: 4648822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4649030:1
position: 4649030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4649144-4649281:1:exon

position:4649144:1
position: 4649144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4649281:1
position: 4649281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4654071-4654208:1:exon

position:4654071:1
position: 4654071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4654208:1
position: 4654208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4654288-4654422:1:exon

position:4654288:1
position: 4654288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4654422:1
position: 4654422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4655189-4655441:1:exon

position:4655189:1
position: 4655189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4655441:1
position: 4655441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4655542-4656104:1:exon

position:4655542:1
position: 4655542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Grk6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Grk6
product: G protein-coupled receptor kinase 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048334126.1
SIO_010081: Grk6
subclass of: SO_0000673
so part of: Grk6
location: join(4637618..4637808,4642314..4642409,4643368..4643480,4643626..4643703,4643912..4644012,4644272..4644364,4644857..4644920,4645043..4645183,4645444..4645634,4646577..4646614,4646690..4646779,4648822..4649030,4649144..4649281,4654071..4654208,4654288..4654422,4655191..4656104)
location: region:4637618-4656104:1
so has part: feature:4637618-4637808:1:exon
so has part: feature:4642314-4642409:1:exon
so has part: feature:4643368-4643480:1:exon
so has part: feature:4643626-4643703:1:exon
so has part: feature:4643912-4644012:1:exon
so has part: feature:4644272-4644364:1:exon
so has part: feature:4644857-4644920:1:exon
so has part: feature:4645043-4645183:1:exon
so has part: feature:4645444-4645634:1:exon
so has part: feature:4646577-4646614:1:exon
so has part: feature:4646690-4646779:1:exon
so has part: feature:4648822-4649030:1:exon
so has part: feature:4649144-4649281:1:exon
so has part: feature:4654071-4654208:1:exon
so has part: feature:4654288-4654422:1:exon
so has part: feature:4655191-4656104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4637618-4637808:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4642314-4642409:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4643368-4643480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4643626-4643703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4643912-4644012:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4644272-4644364:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4644857-4644920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4645043-4645183:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4645444-4645634:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4646577-4646614:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4646690-4646779:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4648822-4649030:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4649144-4649281:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4654071-4654208:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4654288-4654422:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4655191-4656104:1:exon

position:4655191:1
position: 4655191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Grk6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Grk6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-coupled receptor kinase 6 isoform X1
translation: MELENIVANTVLLKAREGGGGNRKGKSKKWRQMLQFPHISQCEELRLNLERDYHNLCERQPIGRLLFREFCATRPELTRCTAFLDGVAEYEVTPDEKRKACGRRLMQNFLSHTGPDLIPEVPRQLVTNCAQRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLSKDPAERLGCRGGGAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVFGLDGSVPPDLDWKGQPPAPPKKGLLQRLFSRQDCCGNCSDSEEELPTRL
SIO_010081: Grk6
subclass of: SO_0000673
so part of: Grk6
location: join(4637757..4637808,4642314..4642409,4643368..4643480,4643626..4643703,4643912..4644012,4644272..4644364,4644857..4644920,4645043..4645183,4645444..4645634,4646577..4646614,4646690..4646779,4648822..4649030,4649144..4649281,4654071..4654208,4654288..4654422,4655191..4655244)
location: region:4637757-4655244:1
so has part: feature:4637757-4637808:1:exon
so has part: feature:4642314-4642409:1:exon
so has part: feature:4643368-4643480:1:exon
so has part: feature:4643626-4643703:1:exon
so has part: feature:4643912-4644012:1:exon
so has part: feature:4644272-4644364:1:exon
so has part: feature:4644857-4644920:1:exon
so has part: feature:4645043-4645183:1:exon
so has part: feature:4645444-4645634:1:exon
so has part: feature:4646577-4646614:1:exon
so has part: feature:4646690-4646779:1:exon
so has part: feature:4648822-4649030:1:exon
so has part: feature:4649144-4649281:1:exon
so has part: feature:4654071-4654208:1:exon
so has part: feature:4654288-4654422:1:exon
so has part: feature:4655191-4655244:1:exon

XP_048190083.1
type: Protein
SIO_000068: ncbiprotein

position:4637757:1
position: 4637757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4655244:1
position: 4655244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4637757-4637808:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4642314-4642409:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4643368-4643480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4643626-4643703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4643912-4644012:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4644272-4644364:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4644857-4644920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4645043-4645183:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4645444-4645634:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4646577-4646614:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4646690-4646779:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4648822-4649030:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4649144-4649281:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4654071-4654208:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4654288-4654422:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4655191-4655244:1:exon

Grk6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Grk6
product: G protein-coupled receptor kinase 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048334127.1
SIO_010081: Grk6
subclass of: SO_0000673
so part of: Grk6
location: join(4643314..4643480,4643626..4643703,4643912..4644012,4644272..4644364,4644857..4644920,4645043..4645183,4645444..4645634,4646577..4646614,4646690..4646779,4648822..4649030,4649144..4649281,4654071..4654208,4654288..4654422,4655189..4656104)
location: region:4643314-4656104:1
so has part: feature:4643314-4643480:1:exon
so has part: feature:4643626-4643703:1:exon
so has part: feature:4643912-4644012:1:exon
so has part: feature:4644272-4644364:1:exon
so has part: feature:4644857-4644920:1:exon
so has part: feature:4645043-4645183:1:exon
so has part: feature:4645444-4645634:1:exon
so has part: feature:4646577-4646614:1:exon
so has part: feature:4646690-4646779:1:exon
so has part: feature:4648822-4649030:1:exon
so has part: feature:4649144-4649281:1:exon
so has part: feature:4654071-4654208:1:exon
so has part: feature:4654288-4654422:1:exon
so has part: feature:4655189-4656104:1:exon

position:4643314:1
position: 4643314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4643314-4643480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4643626-4643703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4643912-4644012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4644272-4644364:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4644857-4644920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4645043-4645183:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4645444-4645634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4646577-4646614:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4646690-4646779:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4648822-4649030:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4649144-4649281:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4654071-4654208:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4654288-4654422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4655189-4656104:1:exon

Grk6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Grk6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-coupled receptor kinase 6 isoform X2
translation: MQNFLSHTGPDLIPEVPRQLVTNCAQRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLSKDPAERLGCRGGGAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVFGLDGSVPPDLDWKGQPPAPPKKGLLQRLFSRQRIAVGTAATARKSSPPASSPQAEAPTGGWR
SIO_010081: Grk6
subclass of: SO_0000673
so part of: Grk6
location: join(4643680..4643703,4643912..4644012,4644272..4644364,4644857..4644920,4645043..4645183,4645444..4645634,4646577..4646614,4646690..4646779,4648822..4649030,4649144..4649281,4654071..4654208,4654288..4654422,4655189..4655281)
location: region:4643680-4655281:1
so has part: feature:4643680-4643703:1:exon
so has part: feature:4643912-4644012:1:exon
so has part: feature:4644272-4644364:1:exon
so has part: feature:4644857-4644920:1:exon
so has part: feature:4645043-4645183:1:exon
so has part: feature:4645444-4645634:1:exon
so has part: feature:4646577-4646614:1:exon
so has part: feature:4646690-4646779:1:exon
so has part: feature:4648822-4649030:1:exon
so has part: feature:4649144-4649281:1:exon
so has part: feature:4654071-4654208:1:exon
so has part: feature:4654288-4654422:1:exon
so has part: feature:4655189-4655281:1:exon

XP_048190084.1
type: Protein
SIO_000068: ncbiprotein

position:4643680:1
position: 4643680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4655281:1
position: 4655281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4643680-4643703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4643912-4644012:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4644272-4644364:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4644857-4644920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4645043-4645183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4645444-4645634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4646577-4646614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4646690-4646779:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4648822-4649030:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4649144-4649281:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4654071-4654208:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4654288-4654422:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4655189-4655281:1:exon

Prr7
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Prr7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4666784..4668793
location: region:4666784-4668793:1
so has part: feature:4666784-4668793:1:exon
subclass of: SO_0000010

125342040
type: Gene
SIO_000068: ncbigene

position:4666784:1
position: 4666784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4668793:1
position: 4668793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition