Perognathus longimembris pacificus isolate PPM17 chromosome 22, ASM2315922v1, whole genome shotgun sequence.
type: Entry
definition: Perognathus longimembris pacificus isolate PPM17 chromosome 22, ASM2315922v1, whole genome shotgun sequence.
sequence version: NC_063182.1
sequence date: 2022-05-19
sequence: sequence
division: CON
label: NC_063182.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA837248
dblink: SAMN26876106
keyword: WGS
keyword: RefSeq
source: Perognathus longimembris pacificus (Pacific pocket mouse)
organism: Perognathus longimembris pacificus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Perognathinae; Perognathus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM041285.1.\nAssembly name: ASM2315922v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the San Diego Zoo Wildlife\nAlliance on 2022/04/27. The original whole-genome shotgun project\nhas the accession JALGBO000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: San Diego Zoo Wildlife Alliance\nAssembly Date :: 2021\nAssembly Method :: Peregrine v. JUNE-2020; HiRise v.\n JULY-2020; Juicer v. DECEMBER-2020;\n Juicebox Assembly Tools v. DECEMBER-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 23.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Perognathus longimembris pacificus\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 38122789
topology: linear
so has quality: SO_0000987
location: 1..38122789
location: region:1-38122789:1
RO_0002162: 214514

NC_063182
type: RefSeq
SIO_000068: refseq

PRJNA837248
type: BioProject
SIO_000068: bioproject

SAMN26876106
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38122789:1
position: 38122789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-38122789:1:source
so part of: sequence
organism: Perognathus longimembris pacificus
mol type: genomic DNA
isolate: PPM17
sub species: pacificus
chromosome: 22
sex: male
cell line: 21356
cell type: fibroblast
tissue type: trachea
dev stage: adult
country: USA: Santa Margarita
collection date: 2019
collected by: SDZWA

214514
type: Taxonomy
SIO_000068: taxonomy

LOC125339886
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125339886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 29162..41988
location: region:29162-41988:1
so has part: feature:29162-41988:1:exon
subclass of: SO_0000011

125339886
type: Gene
SIO_000068: ncbigene

position:29162:1
position: 29162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41988:1
position: 41988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29162-41988:1:exon

LOC125339886
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125339886
product: uncharacterized LOC125339886
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007208649.1
SIO_010081: LOC125339886
subclass of: SO_0000673
so part of: LOC125339886
location: join(29162..29421,32500..32510,41979..41988)
location: region:29162-41988:1
so has part: feature:29162-29421:1:exon
so has part: feature:32500-32510:1:exon
so has part: feature:41979-41988:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29162-29421:1:exon

position:29421:1
position: 29421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:32500-32510:1:exon

position:32500:1
position: 32500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32510:1
position: 32510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41979-41988:1:exon

position:41979:1
position: 41979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125340169
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125340169
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(83037..102430)
location: region:83037-102430:-1
so has part: feature:83037-102430:-1:exon
subclass of: SO_0000010

125340169
type: Gene
SIO_000068: ncbigene

position:83037:-1
position: 83037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102430:-1
position: 102430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83037-102430:-1:exon

LOC125340169
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125340169
product: zinc finger protein 124-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331615.1
SIO_010081: LOC125340169
subclass of: SO_0000673
so part of: LOC125340169
location: complement(join(83037..83555,99079..99139,99432..99558,102389..102430))
location: region:83037-102430:-1
so has part: feature:102389-102430:-1:exon
so has part: feature:99432-99558:-1:exon
so has part: feature:99079-99139:-1:exon
so has part: feature:83037-83555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102389-102430:-1:exon

position:102389:-1
position: 102389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99432-99558:-1:exon

position:99432:-1
position: 99432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99558:-1
position: 99558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99079-99139:-1:exon

position:99079:-1
position: 99079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99139:-1
position: 99139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:83037-83555:-1:exon

position:83555:-1
position: 83555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125340169
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125340169
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 124-like
translation: MEVTVKGIYLPYMVEPFSFKDVSVKFSKEEWALLDHSQKSFYRDVMLETFSNFSCIGTKWTDLNRNDQHKNSQKNLRILLPCGVVPAYPSFVAC
SIO_010081: LOC125340169
subclass of: SO_0000673
so part of: LOC125340169
location: complement(join(83501..83555,99079..99139,99432..99558,102389..102430))
location: region:83501-102430:-1
so has part: feature:102389-102430:-1:exon
so has part: feature:99432-99558:-1:exon
so has part: feature:99079-99139:-1:exon
so has part: feature:83501-83555:-1:exon

XP_048187572.1
type: Protein
SIO_000068: ncbiprotein

position:83501:-1
position: 83501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102389-102430:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99432-99558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99079-99139:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83501-83555:-1:exon

LOC125340242
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125340242
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 112286..112383
location: region:112286-112383:1
so has part: feature:112286-112383:1:exon

125340242
type: Gene
SIO_000068: ncbigene

position:112286:1
position: 112286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112383:1
position: 112383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112286-112383:1:exon

LOC125340242
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125340242
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC125340242
subclass of: SO_0000673
so part of: LOC125340242
location: 112286..112383
location: region:112286-112383:1
so has part: feature:112286-112383:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:112286-112383:1:exon

Adamts19
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Adamts19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 133544..289364
location: region:133544-289364:1
so has part: feature:133544-289364:1:exon
subclass of: SO_0000010

125340033
type: Gene
SIO_000068: ncbigene

position:133544:1
position: 133544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289364:1
position: 289364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133544-289364:1:exon

Adamts19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Adamts19
product: ADAM metallopeptidase with thrombospondin type 1 motif 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331432.1
SIO_010081: Adamts19
subclass of: SO_0000673
so part of: Adamts19
location: join(133544..133753,134357..135009,152288..152453,164879..165051,166887..166970,168943..169100,180901..180944,196607..196712,212456..212596,214572..214722,224764..224865,231660..231790,232623..232795,236163..236287,243620..243740,249445..249525,257837..257994,261335..261488,263830..263965,267729..267933,270312..270464,286890..287067,289125..289364)
location: region:133544-289364:1
so has part: feature:133544-133753:1:exon
so has part: feature:134357-135009:1:exon
so has part: feature:152288-152453:1:exon
so has part: feature:164879-165051:1:exon
so has part: feature:166887-166970:1:exon
so has part: feature:168943-169100:1:exon
so has part: feature:180901-180944:1:exon
so has part: feature:196607-196712:1:exon
so has part: feature:212456-212596:1:exon
so has part: feature:214572-214722:1:exon
so has part: feature:224764-224865:1:exon
so has part: feature:231660-231790:1:exon
so has part: feature:232623-232795:1:exon
so has part: feature:236163-236287:1:exon
so has part: feature:243620-243740:1:exon
so has part: feature:249445-249525:1:exon
so has part: feature:257837-257994:1:exon
so has part: feature:261335-261488:1:exon
so has part: feature:263830-263965:1:exon
so has part: feature:267729-267933:1:exon
so has part: feature:270312-270464:1:exon
so has part: feature:286890-287067:1:exon
so has part: feature:289125-289364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133544-133753:1:exon

position:133753:1
position: 133753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134357-135009:1:exon

position:134357:1
position: 134357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135009:1
position: 135009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:152288-152453:1:exon

position:152288:1
position: 152288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152453:1
position: 152453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:164879-165051:1:exon

position:164879:1
position: 164879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165051:1
position: 165051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:166887-166970:1:exon

position:166887:1
position: 166887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166970:1
position: 166970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:168943-169100:1:exon

position:168943:1
position: 168943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169100:1
position: 169100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:180901-180944:1:exon

position:180901:1
position: 180901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180944:1
position: 180944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:196607-196712:1:exon

position:196607:1
position: 196607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196712:1
position: 196712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:212456-212596:1:exon

position:212456:1
position: 212456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212596:1
position: 212596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:214572-214722:1:exon

position:214572:1
position: 214572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214722:1
position: 214722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:224764-224865:1:exon

position:224764:1
position: 224764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224865:1
position: 224865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:231660-231790:1:exon

position:231660:1
position: 231660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231790:1
position: 231790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:232623-232795:1:exon

position:232623:1
position: 232623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232795:1
position: 232795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:236163-236287:1:exon

position:236163:1
position: 236163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236287:1
position: 236287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:243620-243740:1:exon

position:243620:1
position: 243620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243740:1
position: 243740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:249445-249525:1:exon

position:249445:1
position: 249445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249525:1
position: 249525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:257837-257994:1:exon

position:257837:1
position: 257837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257994:1
position: 257994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:261335-261488:1:exon

position:261335:1
position: 261335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261488:1
position: 261488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:263830-263965:1:exon

position:263830:1
position: 263830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263965:1
position: 263965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:267729-267933:1:exon

position:267729:1
position: 267729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267933:1
position: 267933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:270312-270464:1:exon

position:270312:1
position: 270312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270464:1
position: 270464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:286890-287067:1:exon

position:286890:1
position: 286890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287067:1
position: 287067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:289125-289364:1:exon

position:289125:1
position: 289125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Adamts19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Adamts19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A disintegrin and metalloproteinase with thrombospondin motifs 19 isoform X2
translation: MRLTHFCCCCLLYQLGLLWSGLASGLQRVPHPKEWEVVFPVLWRREPVNAAGGRGGSADPGSTRGFGGRGGARAQAAGTSREVRSVAPAPLELPTEGQSESQFRPSSPPASEDEELESRELPRGSGGPAFPFPGVSASGQPSPPPPPPPSPPPTQQAELGGDEVLLRIPAFSRDLYLLLRRDERFLAPRFAVEQRPSPGSGPPGAAATPRPLLPPNASCFYTGVVLRYPGSLASFSTCGGGLMGIIQLNEDLIFIQPLNDTMAITGYPHRLYRQKRSVEEKVTEKSEHHNHYCGIISDKGRPRSKKISKSERWKRNSYKSSQEYNIETVVVADSAMVSYHGADAARRFILTILNMVFNLFQHKSLGVQVNLRVIKLILLHETPADLYIGHHGEKMLESFCKWQHEEFGKKNDIHSEMSTGWGEDLTSVDAAILITRKDFCVHKDEPCDTVGIAYLNGICSEKRKCIIAEDNGLNLAFTIAHEMGHNMGISHDNDHPSCAEGLHIMSGEWIKGQNLGDVSWSGCSKQDLEQFLRSKASSCLLQTNPQSVNSMMVPSKLLGTTFSADEQCEILFGPSASFCEEKQNVICAGLWCRVEGEKECRSKHDPPMDGTDCLPGKWCKAGECSSRTSAPEHWAGEWSMWSSCSRTCSSGISSRERKCPGLSSEARDCNGPRKQYRVCENPPCPAGVPGFRDWQCQAYNFKSSHPKQVLPWQAVMDEEKPCALFCSVGKEQPVLLSEKVMDGTSCGYLGLDLCANGRCQKIGCDGLLGSLAREDHCGVCNGDGKSCRIIKGDFNYTRGTGYVEVLVMPAGARSIKIVEEKPAHGYLVLRDTGKRSINTDWKIEQPGAFNLAGTTIHYVRRGLWEKISARGPTTTPLHLLVLLFQDQNYGLHYEYIIPLDPIPDNQSSRASEPLFLWTHTGWEDCDVTCGGGERKTTVSCTKVMSKNISIVDNRKCKHLTKPDPQIRKCNEQPCQTRWMMTEWTTCSQTCGKGMQNRQVACTQQLSNGTLIRARERDCVGPKPASAQRCEGQDCMTVWEAGVWSECSAKCGKGVRHRTVRCTNPRKKCVLSTRPREAEDCEDYSKCYVWQMGDWSKCSVTCGKGMQSRVIQCMHKVTGRHGNECFSSEKPAAYRPCHLQPCNEKINVNTITSPRLAALTFKCLGDQWPVYCRVIREKNLCQDMRWYQRCCDMCRDFYAQKLQQKS
SIO_010081: Adamts19
subclass of: SO_0000673
so part of: Adamts19
location: join(133681..133753,134357..135009,152288..152453,164879..165051,166887..166970,168943..169100,180901..180944,196607..196712,212456..212596,214572..214722,224764..224865,231660..231790,232623..232795,236163..236287,243620..243740,249445..249525,257837..257994,261335..261488,263830..263965,267729..267933,270312..270464,286890..287067,289125..289276)
location: region:133681-289276:1
so has part: feature:133681-133753:1:exon
so has part: feature:134357-135009:1:exon
so has part: feature:152288-152453:1:exon
so has part: feature:164879-165051:1:exon
so has part: feature:166887-166970:1:exon
so has part: feature:168943-169100:1:exon
so has part: feature:180901-180944:1:exon
so has part: feature:196607-196712:1:exon
so has part: feature:212456-212596:1:exon
so has part: feature:214572-214722:1:exon
so has part: feature:224764-224865:1:exon
so has part: feature:231660-231790:1:exon
so has part: feature:232623-232795:1:exon
so has part: feature:236163-236287:1:exon
so has part: feature:243620-243740:1:exon
so has part: feature:249445-249525:1:exon
so has part: feature:257837-257994:1:exon
so has part: feature:261335-261488:1:exon
so has part: feature:263830-263965:1:exon
so has part: feature:267729-267933:1:exon
so has part: feature:270312-270464:1:exon
so has part: feature:286890-287067:1:exon
so has part: feature:289125-289276:1:exon

XP_048187389.1
type: Protein
SIO_000068: ncbiprotein

position:133681:1
position: 133681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289276:1
position: 289276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133681-133753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134357-135009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152288-152453:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164879-165051:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166887-166970:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168943-169100:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:180901-180944:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:196607-196712:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212456-212596:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:214572-214722:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:224764-224865:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:231660-231790:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:232623-232795:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:236163-236287:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:243620-243740:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:249445-249525:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:257837-257994:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:261335-261488:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:263830-263965:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:267729-267933:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:270312-270464:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:286890-287067:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:289125-289276:1:exon

Adamts19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Adamts19
product: ADAM metallopeptidase with thrombospondin type 1 motif 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331431.1
SIO_010081: Adamts19
subclass of: SO_0000673
so part of: Adamts19
location: join(133853..135009,152288..152453,164879..165051,166887..166970,168943..169100,180901..180944,196607..196712,212456..212596,214572..214722,224764..224865,231660..231790,232623..232795,236163..236287,243620..243740,249445..249525,257837..257994,261335..261488,263830..263965,267729..267933,270312..270464,286890..287067,289125..289364)
location: region:133853-289364:1
so has part: feature:133853-135009:1:exon
so has part: feature:152288-152453:1:exon
so has part: feature:164879-165051:1:exon
so has part: feature:166887-166970:1:exon
so has part: feature:168943-169100:1:exon
so has part: feature:180901-180944:1:exon
so has part: feature:196607-196712:1:exon
so has part: feature:212456-212596:1:exon
so has part: feature:214572-214722:1:exon
so has part: feature:224764-224865:1:exon
so has part: feature:231660-231790:1:exon
so has part: feature:232623-232795:1:exon
so has part: feature:236163-236287:1:exon
so has part: feature:243620-243740:1:exon
so has part: feature:249445-249525:1:exon
so has part: feature:257837-257994:1:exon
so has part: feature:261335-261488:1:exon
so has part: feature:263830-263965:1:exon
so has part: feature:267729-267933:1:exon
so has part: feature:270312-270464:1:exon
so has part: feature:286890-287067:1:exon
so has part: feature:289125-289364:1:exon

position:133853:1
position: 133853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133853-135009:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152288-152453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164879-165051:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166887-166970:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168943-169100:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:180901-180944:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:196607-196712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212456-212596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:214572-214722:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:224764-224865:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:231660-231790:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:232623-232795:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:236163-236287:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:243620-243740:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:249445-249525:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:257837-257994:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:261335-261488:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:263830-263965:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:267729-267933:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:270312-270464:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:286890-287067:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:289125-289364:1:exon

Adamts19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Adamts19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A disintegrin and metalloproteinase with thrombospondin motifs 19 isoform X1
translation: MYLLLTGSAALYAPHFSASPAGLQRVPHPKEWEVVFPVLWRREPVNAAGGRGGSADPGSTRGFGGRGGARAQAAGTSREVRSVAPAPLELPTEGQSESQFRPSSPPASEDEELESRELPRGSGGPAFPFPGVSASGQPSPPPPPPPSPPPTQQAELGGDEVLLRIPAFSRDLYLLLRRDERFLAPRFAVEQRPSPGSGPPGAAATPRPLLPPNASCFYTGVVLRYPGSLASFSTCGGGLMGIIQLNEDLIFIQPLNDTMAITGYPHRLYRQKRSVEEKVTEKSEHHNHYCGIISDKGRPRSKKISKSERWKRNSYKSSQEYNIETVVVADSAMVSYHGADAARRFILTILNMVFNLFQHKSLGVQVNLRVIKLILLHETPADLYIGHHGEKMLESFCKWQHEEFGKKNDIHSEMSTGWGEDLTSVDAAILITRKDFCVHKDEPCDTVGIAYLNGICSEKRKCIIAEDNGLNLAFTIAHEMGHNMGISHDNDHPSCAEGLHIMSGEWIKGQNLGDVSWSGCSKQDLEQFLRSKASSCLLQTNPQSVNSMMVPSKLLGTTFSADEQCEILFGPSASFCEEKQNVICAGLWCRVEGEKECRSKHDPPMDGTDCLPGKWCKAGECSSRTSAPEHWAGEWSMWSSCSRTCSSGISSRERKCPGLSSEARDCNGPRKQYRVCENPPCPAGVPGFRDWQCQAYNFKSSHPKQVLPWQAVMDEEKPCALFCSVGKEQPVLLSEKVMDGTSCGYLGLDLCANGRCQKIGCDGLLGSLAREDHCGVCNGDGKSCRIIKGDFNYTRGTGYVEVLVMPAGARSIKIVEEKPAHGYLVLRDTGKRSINTDWKIEQPGAFNLAGTTIHYVRRGLWEKISARGPTTTPLHLLVLLFQDQNYGLHYEYIIPLDPIPDNQSSRASEPLFLWTHTGWEDCDVTCGGGERKTTVSCTKVMSKNISIVDNRKCKHLTKPDPQIRKCNEQPCQTRWMMTEWTTCSQTCGKGMQNRQVACTQQLSNGTLIRARERDCVGPKPASAQRCEGQDCMTVWEAGVWSECSAKCGKGVRHRTVRCTNPRKKCVLSTRPREAEDCEDYSKCYVWQMGDWSKCSVTCGKGMQSRVIQCMHKVTGRHGNECFSSEKPAAYRPCHLQPCNEKINVNTITSPRLAALTFKCLGDQWPVYCRVIREKNLCQDMRWYQRCCDMCRDFYAQKLQQKS
SIO_010081: Adamts19
subclass of: SO_0000673
so part of: Adamts19
location: join(134293..135009,152288..152453,164879..165051,166887..166970,168943..169100,180901..180944,196607..196712,212456..212596,214572..214722,224764..224865,231660..231790,232623..232795,236163..236287,243620..243740,249445..249525,257837..257994,261335..261488,263830..263965,267729..267933,270312..270464,286890..287067,289125..289276)
location: region:134293-289276:1
so has part: feature:134293-135009:1:exon
so has part: feature:152288-152453:1:exon
so has part: feature:164879-165051:1:exon
so has part: feature:166887-166970:1:exon
so has part: feature:168943-169100:1:exon
so has part: feature:180901-180944:1:exon
so has part: feature:196607-196712:1:exon
so has part: feature:212456-212596:1:exon
so has part: feature:214572-214722:1:exon
so has part: feature:224764-224865:1:exon
so has part: feature:231660-231790:1:exon
so has part: feature:232623-232795:1:exon
so has part: feature:236163-236287:1:exon
so has part: feature:243620-243740:1:exon
so has part: feature:249445-249525:1:exon
so has part: feature:257837-257994:1:exon
so has part: feature:261335-261488:1:exon
so has part: feature:263830-263965:1:exon
so has part: feature:267729-267933:1:exon
so has part: feature:270312-270464:1:exon
so has part: feature:286890-287067:1:exon
so has part: feature:289125-289276:1:exon

XP_048187388.1
type: Protein
SIO_000068: ncbiprotein

position:134293:1
position: 134293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134293-135009:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152288-152453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164879-165051:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166887-166970:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168943-169100:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:180901-180944:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:196607-196712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212456-212596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:214572-214722:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:224764-224865:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:231660-231790:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:232623-232795:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:236163-236287:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:243620-243740:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:249445-249525:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:257837-257994:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:261335-261488:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:263830-263965:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:267729-267933:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:270312-270464:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:286890-287067:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:289125-289276:1:exon

Minar2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Minar2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 300279..308404
location: region:300279-308404:1
so has part: feature:300279-308404:1:exon
subclass of: SO_0000010

125340062
type: Gene
SIO_000068: ncbigene

position:300279:1
position: 300279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308404:1
position: 308404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300279-308404:1:exon

Minar2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Minar2
product: membrane integral NOTCH2 associated receptor 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331469.1
SIO_010081: Minar2
subclass of: SO_0000673
so part of: Minar2
location: join(300279..300532,304535..304756,307967..308404)
location: region:300279-308404:1
so has part: feature:300279-300532:1:exon
so has part: feature:304535-304756:1:exon
so has part: feature:307967-308404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300279-300532:1:exon

position:300532:1
position: 300532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:304535-304756:1:exon

position:304535:1
position: 304535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304756:1
position: 304756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:307967-308404:1:exon

position:307967:1
position: 307967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Minar2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Minar2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major intrinsically disordered NOTCH2-binding receptor 1-like
translation: MDLSVLPNNNHPDKFLQLDVKSLMRSPALLQASLARFPGGTPPAAQHWQNLVYAQRENTTTQRIKGFSLEVPLVADSPHPSMSSVMKNNPLYGDISLEEAMEERKKNPSWTIEEYDKHSLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKKKKRDKRSKLCHMGLIFLLVTSVLVTIVTISTFFT
SIO_010081: Minar2
subclass of: SO_0000673
so part of: Minar2
location: join(300368..300532,304535..304756,307967..308146)
location: region:300368-308146:1
so has part: feature:300368-300532:1:exon
so has part: feature:304535-304756:1:exon
so has part: feature:307967-308146:1:exon

XP_048187426.1
type: Protein
SIO_000068: ncbiprotein

position:300368:1
position: 300368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308146:1
position: 308146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300368-300532:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:304535-304756:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307967-308146:1:exon

Chsy3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Chsy3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 339576..460167
location: region:339576-460167:1
so has part: feature:339576-460167:1:exon
subclass of: SO_0000010

125339917
type: Gene
SIO_000068: ncbigene

position:339576:1
position: 339576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460167:1
position: 460167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339576-460167:1:exon

Chsy3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Chsy3
product: chondroitin sulfate synthase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048331290.1
SIO_010081: Chsy3
subclass of: SO_0000673
so part of: Chsy3
location: join(339576..340501,342675..342958,457821..460167)
location: region:339576-460167:1
so has part: feature:339576-340501:1:exon
so has part: feature:342675-342958:1:exon
so has part: feature:457821-460167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:339576-340501:1:exon

position:340501:1
position: 340501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:342675-342958:1:exon

position:342675:1
position: 342675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342958:1
position: 342958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:457821-460167:1:exon

position:457821:1
position: 457821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Chsy3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Chsy3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate synthase 3
translation: MAVRSRRSWMSVALGLVLGFTAASWLIAPRVAELSERKRRSSSLCSYYGRLAAGPRARAPRPLPQPQSWPRPDPSPLPARPGLRAPPPPEAAPGGSRSQSSPWQPRQRGRGPDGATGLPAVPAAGKEPEGEDGDAAGRREGGRPGGSHNGSGDGGAAPPSSRPRDFLYVGVMTAQKYLGSRALAAQRTWARSIPGRVEFFSSEQSSSPVRGQPPPPLPVVALPGVDDSYPPQKKSFMMIKYMHDHYLDKYEWFMRADDDVYIKGDKLEEFLRSLNSSKPLYLGQTGLGNIEELGKLGLEPGENFCMGGPGMIFSREVLRRMVPHIGECLREMYTTHEDVEVGRCVRRFGGTQCVWSYEMQQLFHENYEHNRKGYIQDLHNSKIHAAITLHPNKRPAYQYRLHNYVLSRKISELRHRTIQLHRESALMSKLSNSEVSKEDQQLGVMPSFNHFQPRERNEVIEWEFLTGKLLYSAAENQPPRQNINSILRTALDDTVLQVMEMINENAKSRGRLIDFKEIQYGYRRVDPLHGVEYILDLLLLYKRHKGRKLTVPVRRHAYLQQLFSKPFFREMEELDINGLVESINSDTQPFSLIPNSLMILSSLQGTKEMGGQNEKKIHILVPLVGRYDIFLRFMENFENVCLIPLQNVKLVIILFSRDSGQDSDKHVELIQDYQNKYPKADITLIPTKGEFSRGLGLEMASSQFDNDTLLLFCDVDLIFRGDFLQRCRDNTIQGQQVYYPIIFSQYDPKVTSGGNPPTDDNFVFSKKTGFWRDYGYGITCIYKSDLLDAGGFDTSIQGWGLEDVDLYSKVILSGLRPFRSQEVGVVHIFHPVHCDPNLDPKQYKMCLGSKASTFASTVQLAELWLEKHLGVRYNRTLS
SIO_010081: Chsy3
subclass of: SO_0000673
so part of: Chsy3
location: join(339712..340501,342675..342958,457821..459383)
location: region:339712-459383:1
so has part: feature:339712-340501:1:exon
so has part: feature:342675-342958:1:exon
so has part: feature:457821-459383:1:exon

XP_048187247.1
type: Protein
SIO_000068: ncbiprotein

position:339712:1
position: 339712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459383:1
position: 459383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339712-340501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:342675-342958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457821-459383:1:exon

LOC125340059
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125340059
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(376734..450520)
location: region:376734-450520:-1
so has part: feature:376734-450520:-1:exon

125340059
type: Gene
SIO_000068: ncbigene

position:376734:-1
position: 376734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450520:-1
position: 450520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376734-450520:-1:exon

LOC125340059
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125340059
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC125340059
subclass of: SO_0000673
so part of: LOC125340059
location: complement(376734..377747)
location: region:376734-377747:-1
so has part: feature:376734-377747:-1:exon

position:377747:-1
position: 377747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376734-377747:-1:exon

LOC125340059
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125340059
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC125340059
subclass of: SO_0000673
so part of: LOC125340059
location: complement(450451..450520)
location: region:450451-450520:-1
so has part: feature:450451-450520:-1:exon

position:450451:-1
position: 450451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450451-450520:-1:exon

LOC125340087
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125340087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 672540..711159
location: region:672540-711159:1
so has part: feature:672540-711159:1:exon
subclass of: SO_0000010

125340087
type: Gene
SIO_000068: ncbigene

position:672540:1
position: 672540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711159:1
position: 711159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:672540-711159:1:exon

LOC125340087
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125340087
product: interferon-inducible GTPase 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048331507.1
SIO_010081: LOC125340087
subclass of: SO_0000673
so part of: LOC125340087
location: join(672540..672608,673386..673470,681247..682540)
location: region:672540-682540:1
so has part: feature:672540-672608:1:exon
so has part: feature:673386-673470:1:exon
so has part: feature:681247-682540:1:exon

position:682540:1
position: 682540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:672540-672608:1:exon

position:672608:1
position: 672608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:673386-673470:1:exon

position:673386:1
position: 673386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673470:1
position: 673470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:681247-682540:1:exon

position:681247:1
position: 681247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125340087
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125340087
product: interferon-inducible GTPase 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048331508.1
SIO_010081: LOC125340087
subclass of: SO_0000673
so part of: LOC125340087
location: join(673392..673470,709746..711159)
location: region:673392-711159:1
so has part: feature:673392-673470:1:exon
so has part: feature:709746-711159:1:exon

position:673392:1
position: 673392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673392-673470:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:709746-711159:1:exon

position:709746:1
position: 709746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125340087
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125340087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-inducible GTPase 1-like isoform X2
translation: MGQFFSETPDDTEPREVQSLDSSFDSYFKNFKMETKILSPDAICSIKDYLLKGDMQRANAVITAVLKDIDNAPLNIAVTGGSGAGKSSFINALRGIGHEEEEAAPTGVQDTTMERKKYTYANAPNVTLWDLPGIGTPNFQPKDYLEKVKFKEYDFFFIVSATRFGYNDIELAKAIKFMKKDFYFVRSKVDFLLMNEQRYRPKSFEREKVLQEIRNYCVETFEQNGVEVPEIFLISNHDLADYDFPILTDTLLKNLPAQKRQVFLNSLPNVTDATIEMKRETEMQQIWLDAFKGGAWATLPVVGILRDDEKALEERLNHYRTCFGVDDKSLQSFADNLKVPVERLMTIIQSPHLLKTTEEEPLGDKLWRYLEITCSTSGGPLASWLYFRKYYYLLLHFLDIVANDAKVLLKETYSMAGI
SIO_010081: LOC125340087
subclass of: SO_0000673
so part of: LOC125340087
location: 681268..682524
location: region:681268-682524:1
so has part: feature:681268-682524:1:exon

XP_048187464.1
type: Protein
SIO_000068: ncbiprotein

position:681268:1
position: 681268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682524:1
position: 682524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681268-682524:1:exon

LOC125340087
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125340087
product: interferon-inducible GTPase 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048331506.1
SIO_010081: LOC125340087
subclass of: SO_0000673
so part of: LOC125340087
location: join(701034..701101,701880..701964,709746..711159)
location: region:701034-711159:1
so has part: feature:701034-701101:1:exon
so has part: feature:701880-701964:1:exon
so has part: feature:709746-711159:1:exon

position:701034:1
position: 701034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701034-701101:1:exon

position:701101:1
position: 701101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:701880-701964:1:exon

position:701880:1
position: 701880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701964:1
position: 701964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:709746-711159:1:exon

LOC125340087
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125340087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-inducible GTPase 1-like isoform X1
translation: MGQMFSKTPNEQDQGLASSFVSYFKNFKMETKILSPEAIRSIKDHLLNGDMQRANAVITAVLKDIDNSPLNIAVTGGSGAGKSSFINALRGIGHEEEGAAPTGAQETTMERKKYEYANAPNVTLWDLPGIGTPNFQPKDYLEKVKFKEYDFFLIVSATRFGINDIELAKAIKFMKKDFYFVRSKVDSDLMNEQRSKPKSFEREKVLQGIRNYCVETFEQNGVEVPEIFLISSHDLADYDFPILTDTLLRNLPAQKRQVFLNSLPNITETTIEMKRETERQHIWLEAFKAGALATFPVVGIVRDDERNLEDRLNRYRTCFGVDDKSLQSFADNLKVPVETLMTIIQSPHLLKTTKEEQLGEKLLKYLEIFCSINGGLLASGLYFRKYHCLLLHFLDIVSNDAKVLLKETYSKDHQNPTASTTAGPLVTTARVS
SIO_010081: LOC125340087
subclass of: SO_0000673
so part of: LOC125340087
location: 709767..711065
location: region:709767-711065:1
so has part: feature:709767-711065:1:exon

XP_048187463.1
type: Protein
SIO_000068: ncbiprotein

position:709767:1
position: 709767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711065:1
position: 711065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709767-711065:1:exon

LOC125340087
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125340087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-inducible GTPase 1-like isoform X1
translation: MGQMFSKTPNEQDQGLASSFVSYFKNFKMETKILSPEAIRSIKDHLLNGDMQRANAVITAVLKDIDNSPLNIAVTGGSGAGKSSFINALRGIGHEEEGAAPTGAQETTMERKKYEYANAPNVTLWDLPGIGTPNFQPKDYLEKVKFKEYDFFLIVSATRFGINDIELAKAIKFMKKDFYFVRSKVDSDLMNEQRSKPKSFEREKVLQGIRNYCVETFEQNGVEVPEIFLISSHDLADYDFPILTDTLLRNLPAQKRQVFLNSLPNITETTIEMKRETERQHIWLEAFKAGALATFPVVGIVRDDERNLEDRLNRYRTCFGVDDKSLQSFADNLKVPVETLMTIIQSPHLLKTTKEEQLGEKLLKYLEIFCSINGGLLASGLYFRKYHCLLLHFLDIVSNDAKVLLKETYSKDHQNPTASTTAGPLVTTARVS
SIO_010081: LOC125340087
subclass of: SO_0000673
so part of: LOC125340087
location: 709767..711065
location: region:709767-711065:1
so has part: feature:709767-711065:1:exon

XP_048187465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:709767-711065:1:exon

Smim3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Smim3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(715939..732447)
location: region:715939-732447:-1
so has part: feature:715939-732447:-1:exon
subclass of: SO_0000010

125340081
type: Gene
SIO_000068: ncbigene

position:715939:-1
position: 715939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732447:-1
position: 732447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715939-732447:-1:exon

Smim3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Smim3
product: small integral membrane protein 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331501.1
SIO_010081: Smim3
subclass of: SO_0000673
so part of: Smim3
location: complement(join(715939..717240,732227..732447))
location: region:715939-732447:-1
so has part: feature:732227-732447:-1:exon
so has part: feature:715939-717240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:732227-732447:-1:exon

position:732227:-1
position: 732227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:715939-717240:-1:exon

position:717240:-1
position: 717240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Smim3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Smim3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 3
translation: MDAVTPSAVEVVLPKHILDVWVIVLLILATIVVMTSLLLCPATAVILYRMRTHPVLSGAA
SIO_010081: Smim3
subclass of: SO_0000673
so part of: Smim3
location: complement(717047..717229)
location: region:717047-717229:-1
so has part: feature:717047-717229:-1:exon

XP_048187458.1
type: Protein
SIO_000068: ncbiprotein

position:717047:-1
position: 717047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717229:-1
position: 717229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717047-717229:-1:exon

LOC125340224
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125340224
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 739211..739314
location: region:739211-739314:1
so has part: feature:739211-739314:1:exon
subclass of: SO_0000623

125340224
type: Gene
SIO_000068: ncbigene

position:739211:1
position: 739211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739314:1
position: 739314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:739211-739314:1:exon

LOC125340224
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snRNA
gene: LOC125340224
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007208708.1
SIO_010081: LOC125340224
subclass of: SO_0000673
so part of: LOC125340224
location: 739211..739314
location: region:739211-739314:1
so has part: feature:739211-739314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:739211-739314:1:exon

Dctn4
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Dctn4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 744275..772035
location: region:744275-772035:1
so has part: feature:744275-772035:1:exon
subclass of: SO_0000010

125339883
type: Gene
SIO_000068: ncbigene

position:744275:1
position: 744275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772035:1
position: 772035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744275-772035:1:exon

Dctn4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Dctn4
product: dynactin subunit 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331209.1
SIO_010081: Dctn4
subclass of: SO_0000673
so part of: Dctn4
location: join(744275..744460,747078..747148,749187..749365,752382..752425,754593..754700,757104..757124,757541..757614,758043..758155,758428..758537,760675..760748,764154..764208,765335..765442,768576..768673,769609..772035)
location: region:744275-772035:1
so has part: feature:744275-744460:1:exon
so has part: feature:747078-747148:1:exon
so has part: feature:749187-749365:1:exon
so has part: feature:752382-752425:1:exon
so has part: feature:754593-754700:1:exon
so has part: feature:757104-757124:1:exon
so has part: feature:757541-757614:1:exon
so has part: feature:758043-758155:1:exon
so has part: feature:758428-758537:1:exon
so has part: feature:760675-760748:1:exon
so has part: feature:764154-764208:1:exon
so has part: feature:765335-765442:1:exon
so has part: feature:768576-768673:1:exon
so has part: feature:769609-772035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:744275-744460:1:exon

position:744460:1
position: 744460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:747078-747148:1:exon

position:747078:1
position: 747078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747148:1
position: 747148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:749187-749365:1:exon

position:749187:1
position: 749187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749365:1
position: 749365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:752382-752425:1:exon

position:752382:1
position: 752382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752425:1
position: 752425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:754593-754700:1:exon

position:754593:1
position: 754593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754700:1
position: 754700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:757104-757124:1:exon

position:757104:1
position: 757104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757124:1
position: 757124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:757541-757614:1:exon

position:757541:1
position: 757541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757614:1
position: 757614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:758043-758155:1:exon

position:758043:1
position: 758043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758155:1
position: 758155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:758428-758537:1:exon

position:758428:1
position: 758428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758537:1
position: 758537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:760675-760748:1:exon

position:760675:1
position: 760675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760748:1
position: 760748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:764154-764208:1:exon

position:764154:1
position: 764154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764208:1
position: 764208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:765335-765442:1:exon

position:765335:1
position: 765335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765442:1
position: 765442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:768576-768673:1:exon

position:768576:1
position: 768576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768673:1
position: 768673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:769609-772035:1:exon

position:769609:1
position: 769609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Dctn4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Dctn4
product: dynactin subunit 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331210.1
SIO_010081: Dctn4
subclass of: SO_0000673
so part of: Dctn4
location: join(744276..744460,747078..747148,749187..749365,752382..752425,754593..754700,757541..757614,758043..758155,758428..758537,760675..760748,764154..764208,765335..765442,768576..768673,769609..772035)
location: region:744276-772035:1
so has part: feature:744276-744460:1:exon
so has part: feature:747078-747148:1:exon
so has part: feature:749187-749365:1:exon
so has part: feature:752382-752425:1:exon
so has part: feature:754593-754700:1:exon
so has part: feature:757541-757614:1:exon
so has part: feature:758043-758155:1:exon
so has part: feature:758428-758537:1:exon
so has part: feature:760675-760748:1:exon
so has part: feature:764154-764208:1:exon
so has part: feature:765335-765442:1:exon
so has part: feature:768576-768673:1:exon
so has part: feature:769609-772035:1:exon

position:744276:1
position: 744276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744276-744460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:747078-747148:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:749187-749365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:752382-752425:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:754593-754700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:757541-757614:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758043-758155:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:758428-758537:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:760675-760748:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:764154-764208:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:765335-765442:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:768576-768673:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:769609-772035:1:exon

Dctn4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Dctn4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynactin subunit 4 isoform X1
translation: MASLLQSERVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSISTQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSQHTIHVVDKYGLGTRLQRPRAGASISALAGLSLKEGEDQKEIKIEPAQAVDEVEPLPEDYYTRPVNLTEVTSLQQRLLQPDFQPICASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIPNLRYMKESQVLLTLTNPVENLTHVTLLECEEGDPDNINSTAKVVVPPKELVLAGKDAAAEYDELAEPQDFQDDPDIIAFRKANKVGIFIKVTPQREEGEVTVCFKMKHDFKNLAAPIRPIEESDQGTEVIWLTQHVELSLGPLLP
SIO_010081: Dctn4
subclass of: SO_0000673
so part of: Dctn4
location: join(744326..744460,747078..747148,749187..749365,752382..752425,754593..754700,757104..757124,757541..757614,758043..758155,758428..758537,760675..760748,764154..764208,765335..765442,768576..768673,769609..769822)
location: region:744326-769822:1
so has part: feature:744326-744460:1:exon
so has part: feature:747078-747148:1:exon
so has part: feature:749187-749365:1:exon
so has part: feature:752382-752425:1:exon
so has part: feature:754593-754700:1:exon
so has part: feature:757104-757124:1:exon
so has part: feature:757541-757614:1:exon
so has part: feature:758043-758155:1:exon
so has part: feature:758428-758537:1:exon
so has part: feature:760675-760748:1:exon
so has part: feature:764154-764208:1:exon
so has part: feature:765335-765442:1:exon
so has part: feature:768576-768673:1:exon
so has part: feature:769609-769822:1:exon

XP_048187166.1
type: Protein
SIO_000068: ncbiprotein

position:744326:1
position: 744326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769822:1
position: 769822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744326-744460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:747078-747148:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:749187-749365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:752382-752425:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:754593-754700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:757104-757124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:757541-757614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:758043-758155:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758428-758537:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:760675-760748:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:764154-764208:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:765335-765442:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:768576-768673:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:769609-769822:1:exon

Dctn4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Dctn4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynactin subunit 4 isoform X2
translation: MASLLQSERVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSISTQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSDKYGLGTRLQRPRAGASISALAGLSLKEGEDQKEIKIEPAQAVDEVEPLPEDYYTRPVNLTEVTSLQQRLLQPDFQPICASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIPNLRYMKESQVLLTLTNPVENLTHVTLLECEEGDPDNINSTAKVVVPPKELVLAGKDAAAEYDELAEPQDFQDDPDIIAFRKANKVGIFIKVTPQREEGEVTVCFKMKHDFKNLAAPIRPIEESDQGTEVIWLTQHVELSLGPLLP
SIO_010081: Dctn4
subclass of: SO_0000673
so part of: Dctn4
location: join(744326..744460,747078..747148,749187..749365,752382..752425,754593..754700,757541..757614,758043..758155,758428..758537,760675..760748,764154..764208,765335..765442,768576..768673,769609..769822)
location: region:744326-769822:1
so has part: feature:744326-744460:1:exon
so has part: feature:747078-747148:1:exon
so has part: feature:749187-749365:1:exon
so has part: feature:752382-752425:1:exon
so has part: feature:754593-754700:1:exon
so has part: feature:757541-757614:1:exon
so has part: feature:758043-758155:1:exon
so has part: feature:758428-758537:1:exon
so has part: feature:760675-760748:1:exon
so has part: feature:764154-764208:1:exon
so has part: feature:765335-765442:1:exon
so has part: feature:768576-768673:1:exon
so has part: feature:769609-769822:1:exon

XP_048187167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:744326-744460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:747078-747148:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:749187-749365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:752382-752425:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:754593-754700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:757541-757614:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758043-758155:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:758428-758537:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:760675-760748:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:764154-764208:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:765335-765442:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:768576-768673:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:769609-769822:1:exon

LOC125340133
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125340133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(765910..766275)
location: region:765910-766275:-1
so has part: feature:765910-766275:-1:exon

125340133
type: Gene
SIO_000068: ncbigene

position:765910:-1
position: 765910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766275:-1
position: 766275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765910-766275:-1:exon

LOC125340133
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125340133
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125340133
subclass of: SO_0000673
so part of: LOC125340133
location: complement(765910..766275)
location: region:765910-766275:-1
so has part: feature:765910-766275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:765910-766275:-1:exon

Rbm22
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Rbm22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 779287..790476
location: region:779287-790476:1
so has part: feature:779287-790476:1:exon
subclass of: SO_0000010

125340003
type: Gene
SIO_000068: ncbigene

position:779287:1
position: 779287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790476:1
position: 790476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779287-790476:1:exon

Rbm22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rbm22
product: RNA binding motif protein 22
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331382.1
SIO_010081: Rbm22
subclass of: SO_0000673
so part of: Rbm22
location: join(779287..779430,779786..779839,780732..780761,782053..782185,783458..783558,783688..783860,784740..784940,787251..787415,788191..788279,788400..788528,789391..790476)
location: region:779287-790476:1
so has part: feature:779287-779430:1:exon
so has part: feature:779786-779839:1:exon
so has part: feature:780732-780761:1:exon
so has part: feature:782053-782185:1:exon
so has part: feature:783458-783558:1:exon
so has part: feature:783688-783860:1:exon
so has part: feature:784740-784940:1:exon
so has part: feature:787251-787415:1:exon
so has part: feature:788191-788279:1:exon
so has part: feature:788400-788528:1:exon
so has part: feature:789391-790476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:779287-779430:1:exon

position:779430:1
position: 779430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:779786-779839:1:exon

position:779786:1
position: 779786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779839:1
position: 779839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:780732-780761:1:exon

position:780732:1
position: 780732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780761:1
position: 780761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:782053-782185:1:exon

position:782053:1
position: 782053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782185:1
position: 782185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:783458-783558:1:exon

position:783458:1
position: 783458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783558:1
position: 783558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:783688-783860:1:exon

position:783688:1
position: 783688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783860:1
position: 783860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:784740-784940:1:exon

position:784740:1
position: 784740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784940:1
position: 784940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:787251-787415:1:exon

position:787251:1
position: 787251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787415:1
position: 787415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:788191-788279:1:exon

position:788191:1
position: 788191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788279:1
position: 788279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:788400-788528:1:exon

position:788400:1
position: 788400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788528:1
position: 788528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:789391-790476:1:exon

position:789391:1
position: 789391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rbm22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rbm22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor RBM22
translation: MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQNMEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
SIO_010081: Rbm22
subclass of: SO_0000673
so part of: Rbm22
location: join(779377..779430,779786..779839,780732..780761,782053..782185,783458..783558,783688..783860,784740..784940,787251..787415,788191..788279,788400..788528,789391..789524)
location: region:779377-789524:1
so has part: feature:779377-779430:1:exon
so has part: feature:779786-779839:1:exon
so has part: feature:780732-780761:1:exon
so has part: feature:782053-782185:1:exon
so has part: feature:783458-783558:1:exon
so has part: feature:783688-783860:1:exon
so has part: feature:784740-784940:1:exon
so has part: feature:787251-787415:1:exon
so has part: feature:788191-788279:1:exon
so has part: feature:788400-788528:1:exon
so has part: feature:789391-789524:1:exon

XP_048187339.1
type: Protein
SIO_000068: ncbiprotein

position:779377:1
position: 779377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789524:1
position: 789524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779377-779430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779786-779839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:780732-780761:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782053-782185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:783458-783558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:783688-783860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:784740-784940:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787251-787415:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:788191-788279:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:788400-788528:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789391-789524:1:exon

Myoz3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Myoz3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(793008..800101)
location: region:793008-800101:-1
so has part: feature:793008-800101:-1:exon
subclass of: SO_0000010

125339894
type: Gene
SIO_000068: ncbigene

position:793008:-1
position: 793008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800101:-1
position: 800101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793008-800101:-1:exon

Myoz3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Myoz3
product: myozenin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048331230.1
SIO_010081: Myoz3
subclass of: SO_0000673
so part of: Myoz3
location: complement(join(793008..794021,795816..795969,796203..796329,796504..796557,797539..797693,798556..798617,799829..800101))
location: region:793008-800101:-1
so has part: feature:799829-800101:-1:exon
so has part: feature:798556-798617:-1:exon
so has part: feature:797539-797693:-1:exon
so has part: feature:796504-796557:-1:exon
so has part: feature:796203-796329:-1:exon
so has part: feature:795816-795969:-1:exon
so has part: feature:793008-794021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:799829-800101:-1:exon

position:799829:-1
position: 799829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:798556-798617:-1:exon

position:798556:-1
position: 798556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798617:-1
position: 798617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:797539-797693:-1:exon

position:797539:-1
position: 797539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797693:-1
position: 797693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:796504-796557:-1:exon

position:796504:-1
position: 796504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796557:-1
position: 796557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:796203-796329:-1:exon

position:796203:-1
position: 796203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796329:-1
position: 796329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:795816-795969:-1:exon

position:795816:-1
position: 795816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795969:-1
position: 795969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:793008-794021:-1:exon

position:794021:-1
position: 794021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Myoz3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Myoz3
product: myozenin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048331232.1
SIO_010081: Myoz3
subclass of: SO_0000673
so part of: Myoz3
location: complement(join(793010..794021,795816..795969,796504..796557,797539..797693,798556..798617,799829..800101))
location: region:793010-800101:-1
so has part: feature:799829-800101:-1:exon
so has part: feature:798556-798617:-1:exon
so has part: feature:797539-797693:-1:exon
so has part: feature:796504-796557:-1:exon
so has part: feature:795816-795969:-1:exon
so has part: feature:793010-794021:-1:exon

position:793010:-1
position: 793010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799829-800101:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:798556-798617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:797539-797693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796504-796557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:795816-795969:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793010-794021:-1:exon

Myoz3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Myoz3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myozenin-3 isoform X2
translation: MISKEQKQPTTAVMGSLAGPVPSLDLGKKLSVPQDLMLEELSLRNNRGSLLFQKRHRRVQRFTFEFEASQPGTEARSPRGEVTGAAAPGTATRSRSRPSRRKSSTTPPSPRATAAPGRSWPAPASSAATSRPASPTSAISTGLPCHLEEPWTGRPFTGKAPPLSQSPLVAWNSCASDPTSTGWLRAGSASSQSLRSCRRSL
SIO_010081: Myoz3
subclass of: SO_0000673
so part of: Myoz3
location: complement(join(793840..794021,795816..795969,796504..796557,797539..797693,798556..798616))
location: region:793840-798616:-1
so has part: feature:798556-798616:-1:exon
so has part: feature:797539-797693:-1:exon
so has part: feature:796504-796557:-1:exon
so has part: feature:795816-795969:-1:exon
so has part: feature:793840-794021:-1:exon

XP_048187189.1
type: Protein
SIO_000068: ncbiprotein

position:793840:-1
position: 793840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798616:-1
position: 798616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798556-798616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:797539-797693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:796504-796557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:795816-795969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793840-794021:-1:exon

Myoz3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Myoz3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myozenin-3 isoform X1
translation: MISKEQKQPTTAVMGSLAGPVPSLDLGKKLSVPQDLMLEELSLRNNRGSLLFQKRHRRVQRFTFEFEASQPGTEARSPRGEVTGAAAPGTVASGPQGQHLRASPRGLEDAGAAAAAAAAQPERARSPSALAPGYAEPLQAVPPEKFNHTSIPKGYRCPWQELARPRELRGDLTPRVPDLRNFNRTPVPFGGALDGETFHREGTPFVPEPFSGLELLRLRPNFNRVAQGWVRKLPESEEL
SIO_010081: Myoz3
subclass of: SO_0000673
so part of: Myoz3
location: complement(join(793853..794021,795816..795969,796203..796329,796504..796557,797539..797693,798556..798616))
location: region:793853-798616:-1
so has part: feature:798556-798616:-1:exon
so has part: feature:797539-797693:-1:exon
so has part: feature:796504-796557:-1:exon
so has part: feature:796203-796329:-1:exon
so has part: feature:795816-795969:-1:exon
so has part: feature:793853-794021:-1:exon

XP_048187187.1
type: Protein
SIO_000068: ncbiprotein

position:793853:-1
position: 793853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798556-798616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:797539-797693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:796504-796557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796203-796329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:795816-795969:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793853-794021:-1:exon

Synpo
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Synpo
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(809121..853481)
location: region:809121-853481:-1
so has part: feature:809121-853481:-1:exon
subclass of: SO_0000010

125340015
type: Gene
SIO_000068: ncbigene

position:809121:-1
position: 809121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853481:-1
position: 853481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809121-853481:-1:exon

Synpo
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Synpo
product: synaptopodin
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048331393.1
SIO_010081: Synpo
subclass of: SO_0000673
so part of: Synpo
location: complement(join(809121..811497,838908..839516,853397..853481))
location: region:809121-853481:-1
so has part: feature:853397-853481:-1:exon
so has part: feature:838908-839516:-1:exon
so has part: feature:809121-811497:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853397-853481:-1:exon

position:853397:-1
position: 853397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838908-839516:-1:exon

position:838908:-1
position: 838908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839516:-1
position: 839516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:809121-811497:-1:exon

position:811497:-1
position: 811497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Synpo
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Synpo
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: synaptopodin
translation: MLGPHFPPPPLRPSGGKPALCTFQIPDGSYRCLALEAEESSGEEGLQGEAGGGLVDLEDDEVARRSQDNAACGTVQGEPPLPRALITQPPGCSWFQHDGRTGQDWDGVKAQQGMTTSLSPGPGPGEARKPALSRSSSVAEQDLKEAKARSQQIAAQLTTPPGPHSRGVRLFHRRRQRVNEFTLESRGQRGPPPGRPGDAPAPGLSPARPSTTQGPARRPGMEGYAGEDGPLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQSREAPPAGAHEPEPALDINQNLTDGAPAADANQNPAARGLPQSPSRPHTPEAQRPRPGSAAPDAGNAGDASSRPPDADGPAPAPGDEVRAGVLLVDQASAPPAPAGALSREASAVPGGAPAPDFAPSSPLADAHPSAEPEPSGRPAAAPRMSSEVHLTLARPQAVVNRTARPFGVQAPAGGGLGERSPRVERRHLGEKAPAXPPALAERSPGPQRRAPPPSPAVERRPLGSFTPPPTYAETLSAAPPASRGRSPPAYSALYPGSDPRPGAPRGPAAPASKTGILEESLARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQREQGEAGADEEPFALGAEASNFQPEPARGRAAPAEEPVPEWASCLKSPRIQAKPKPRPNQNLAEASGKGAELYARRQSRMEKYVIESSPGHHELARCPSPTMSLPSSWKYSTSAPGGFRVASLSPARTPPASLYHGYLPENGVLRPEPTRQPPYSLRPSLFALSPVKEPAQAAASPRSASARAAPARAASPRAASPAKPGSLDLVPSLPRAGLPPSPALPRPSRASPGLYASPGQDGLQPAASPTYSSDVSPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQVWKPSFCFK
SIO_010081: Synpo
subclass of: SO_0000673
so part of: Synpo
location: complement(join(809245..811497,838908..839298))
location: region:809245-839298:-1
so has part: feature:838908-839298:-1:exon
so has part: feature:809245-811497:-1:exon

XP_048187350.1
type: Protein
SIO_000068: ncbiprotein

position:809245:-1
position: 809245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839298:-1
position: 839298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838908-839298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:809245-811497:-1:exon

Ndst1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ndst1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(862549..901225)
location: region:862549-901225:-1
so has part: feature:862549-901225:-1:exon
subclass of: SO_0000010

125340170
type: Gene
SIO_000068: ncbigene

position:862549:-1
position: 862549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901225:-1
position: 901225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862549-901225:-1:exon

Ndst1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ndst1
product: N-deacetylase and N-sulfotransferase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331616.1
SIO_010081: Ndst1
subclass of: SO_0000673
so part of: Ndst1
location: complement(join(862549..862810,863944..864008,871369..872530,872598..872711,880973..881136,881976..882157,883147..883275,884247..884433,885900..886054,887730..887817,891358..891853,896078..896954,901161..901225))
location: region:862549-901225:-1
so has part: feature:901161-901225:-1:exon
so has part: feature:896078-896954:-1:exon
so has part: feature:891358-891853:-1:exon
so has part: feature:887730-887817:-1:exon
so has part: feature:885900-886054:-1:exon
so has part: feature:884247-884433:-1:exon
so has part: feature:883147-883275:-1:exon
so has part: feature:881976-882157:-1:exon
so has part: feature:880973-881136:-1:exon
so has part: feature:872598-872711:-1:exon
so has part: feature:871369-872530:-1:exon
so has part: feature:863944-864008:-1:exon
so has part: feature:862549-862810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901161-901225:-1:exon

position:901161:-1
position: 901161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:896078-896954:-1:exon

position:896078:-1
position: 896078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896954:-1
position: 896954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:891358-891853:-1:exon

position:891358:-1
position: 891358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891853:-1
position: 891853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:887730-887817:-1:exon

position:887730:-1
position: 887730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887817:-1
position: 887817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:885900-886054:-1:exon

position:885900:-1
position: 885900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886054:-1
position: 886054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:884247-884433:-1:exon

position:884247:-1
position: 884247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884433:-1
position: 884433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:883147-883275:-1:exon

position:883147:-1
position: 883147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883275:-1
position: 883275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:881976-882157:-1:exon

position:881976:-1
position: 881976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882157:-1
position: 882157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:880973-881136:-1:exon

position:880973:-1
position: 880973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881136:-1
position: 881136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:872598-872711:-1:exon

position:872598:-1
position: 872598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872711:-1
position: 872711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:871369-872530:-1:exon

position:871369:-1
position: 871369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872530:-1
position: 872530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:863944-864008:-1:exon

position:863944:-1
position: 863944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864008:-1
position: 864008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:862549-862810:-1:exon

position:862810:-1
position: 862810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ndst1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ndst1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(896173..896175),aa:OTHER)
product: LOW QUALITY PROTEIN: bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1
translation: MPAVACLRRLCRHLSPQAVFFLLFIFCLFSVFVSAYYLYGWKRGLEPSADAPESDCGDPPAVAPSRLLPLRPVQAVTPSRTDPLVLVFVESLYSQLGQEVVAILESSRFRYRTEMAPGKGDMPTLTDKGRGRFALIVXNILKYVNLDAXNRELLDKYCVAYGVGIVGFFKANENSLLSAQLKGFPLFLHSNLGLKDCSINPKSPLLYVTRPSEVEKGVLPGEDWTVFQSNHSTYEPVLLAKTRSSESIPHLGADAAPHAALHATVVQDLGLHDGIQRVLFGNNLNFWLHKLVFVDAVAFLTGKRLSLPLDRYVLVDIDDIFVGKEGTRMKVEDVKALFDTQNELRTHIPNFTFNLGYSGKFFHTGTDAEDAGDDLLLSYVKEFWWFPHMWSHMQPHLFHNQSVLAEQMALNKKFAVEHGIPTDMGYAVAPHHSGVYPVHVQLYEAWKQVWGIRVTSTEEYPHLKPARYRRGFIHNGIMVLPRQTCGLFTHTIFYNEYPGGSSELDKIINGGELFLTVLLNPISIFMTHLSNYGNDRLGLYTFKHLVRXLNSWTNLRLQTLPPVQLAQKYFQIFSEEKDPLWQDPCEDKRHKDIWSKEKTCDRFPKLLIIGPQKTGRSPPLLLSQATEPRASSGEGWRCGSQGQQGPAEAQARPREAQDAGPRTPPGLLPLSKPRRWSHRVPGASVPSGLDSDAHTVCPGPSIPSGLDSDGHTVCPGPPSPSGLDSDGHTVCPGPPSPVGLDSGAHTVCPGPPSPVGWTPMVTPCARGPPSPVGWTPDAHTVCPGPPSPVGWTPMVTPCARSGVSSVPSGLGLRCSHRVPGGLRPQWAGTSDGHTVCPGPPSPVGWTQVLTTVCPGPPSPVGWTPMVHTVCPGPPSPVGWTPMRTPCARGLRPRWAGLRWSHRVPGASVPSGLDSEVLTPCARGLRPQWAGLRWSHRVPGASVPSGLDSDGHTVCPGPPSPVGWTPMVHTVCPGPPSPVGWTPMVTPCARGLRPQWAGLRWSHRVPGASVPSGLDSDAHTVCPGPPSPWAGLRWLQHTVCPGPPSPGEPACRPVCPGRGPDSRCPHPGGPVEERVVCAPAVTPPRQLDVSPGHSSLLNLCLPKKAWRCPHLKRSGSEIRARKRGAPVSGLFVVNWGEESRWTFLPQLASTPSPRVSGFGGAGISDVATSPA
SIO_010081: Ndst1
subclass of: SO_0000673
so part of: Ndst1
location: complement(join(862549..862810,863944..864008,871369..872530,872598..872711,880973..881136,881976..882157,883147..883275,884247..884433,885900..886054,887730..887817,891358..891853,896078..896586))
location: region:862549-896586:-1
so has part: feature:896078-896586:-1:exon
so has part: feature:891358-891853:-1:exon
so has part: feature:887730-887817:-1:exon
so has part: feature:885900-886054:-1:exon
so has part: feature:884247-884433:-1:exon
so has part: feature:883147-883275:-1:exon
so has part: feature:881976-882157:-1:exon
so has part: feature:880973-881136:-1:exon
so has part: feature:872598-872711:-1:exon
so has part: feature:871369-872530:-1:exon
so has part: feature:863944-864008:-1:exon
so has part: feature:862549-862810:-1:exon

XP_048187573.1
type: Protein
SIO_000068: ncbiprotein

position:896586:-1
position: 896586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896078-896586:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891358-891853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:887730-887817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885900-886054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:884247-884433:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:883147-883275:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:881976-882157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:880973-881136:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:872598-872711:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:871369-872530:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:863944-864008:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:862549-862810:-1:exon

LOC125339921
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125339921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 909555..921008
location: region:909555-921008:1
so has part: feature:909555-921008:1:exon
subclass of: SO_0000011

125339921
type: Gene
SIO_000068: ncbigene

position:909555:1
position: 909555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921008:1
position: 921008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909555-921008:1:exon

LOC125339921
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125339921
product: uncharacterized LOC125339921
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_007208658.1
SIO_010081: LOC125339921
subclass of: SO_0000673
so part of: LOC125339921
location: join(909555..910005,916009..916010,920997..921008)
location: region:909555-921008:1
so has part: feature:909555-910005:1:exon
so has part: feature:916009-916010:1:exon
so has part: feature:920997-921008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:909555-910005:1:exon

position:910005:1
position: 910005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:916009-916010:1:exon

position:916009:1
position: 916009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916010:1
position: 916010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:920997-921008:1:exon

position:920997:1
position: 920997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rps14
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Rps14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 947077..951368
location: region:947077-951368:1
so has part: feature:947077-951368:1:exon
subclass of: SO_0000010

125339857
type: Gene
SIO_000068: ncbigene

position:947077:1
position: 947077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951368:1
position: 951368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947077-951368:1:exon

Rps14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rps14
product: ribosomal protein S14, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331151.1
SIO_010081: Rps14
subclass of: SO_0000673
so part of: Rps14
location: join(947077..947223,948826..948976,949363..949524,950510..950586,951251..951368)
location: region:947077-951368:1
so has part: feature:947077-947223:1:exon
so has part: feature:948826-948976:1:exon
so has part: feature:949363-949524:1:exon
so has part: feature:950510-950586:1:exon
so has part: feature:951251-951368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:947077-947223:1:exon

position:947223:1
position: 947223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:948826-948976:1:exon

position:948826:1
position: 948826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948976:1
position: 948976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:949363-949524:1:exon

position:949363:1
position: 949363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949524:1
position: 949524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:950510-950586:1:exon

position:950510:1
position: 950510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950586:1
position: 950586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:951251-951368:1:exon

position:951251:1
position: 951251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rps14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rps14
product: ribosomal protein S14, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331152.1
SIO_010081: Rps14
subclass of: SO_0000673
so part of: Rps14
location: join(948824..948976,949363..949524,950510..950586,951251..951368)
location: region:948824-951368:1
so has part: feature:948824-948976:1:exon
so has part: feature:949363-949524:1:exon
so has part: feature:950510-950586:1:exon
so has part: feature:951251-951368:1:exon

position:948824:1
position: 948824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948824-948976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949363-949524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950510-950586:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:951251-951368:1:exon

Rps14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rps14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S14
translation: MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL
SIO_010081: Rps14
subclass of: SO_0000673
so part of: Rps14
location: join(948828..948976,949363..949524,950510..950586,951251..951318)
location: region:948828-951318:1
so has part: feature:948828-948976:1:exon
so has part: feature:949363-949524:1:exon
so has part: feature:950510-950586:1:exon
so has part: feature:951251-951318:1:exon

XP_048187108.1
type: Protein
SIO_000068: ncbiprotein

position:948828:1
position: 948828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951318:1
position: 951318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948828-948976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949363-949524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950510-950586:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:951251-951318:1:exon

Rps14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rps14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S14
translation: MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL
SIO_010081: Rps14
subclass of: SO_0000673
so part of: Rps14
location: join(948828..948976,949363..949524,950510..950586,951251..951318)
location: region:948828-951318:1
so has part: feature:948828-948976:1:exon
so has part: feature:949363-949524:1:exon
so has part: feature:950510-950586:1:exon
so has part: feature:951251-951318:1:exon

XP_048187109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:948828-948976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949363-949524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950510-950586:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:951251-951318:1:exon

Cd74
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Cd74
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 959673..968105
location: region:959673-968105:1
so has part: feature:959673-968105:1:exon
subclass of: SO_0000010

125339856
type: Gene
SIO_000068: ncbigene

position:959673:1
position: 959673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968105:1
position: 968105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959673-968105:1:exon

Cd74
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cd74
product: CD74 molecule, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048331149.1
SIO_010081: Cd74
subclass of: SO_0000673
so part of: Cd74
location: join(959673..959844,963711..963883,963975..964054,964391..964453,965759..965854,966130..966217,967291..967482,967761..967823,968025..968075)
location: region:959673-968075:1
so has part: feature:959673-959844:1:exon
so has part: feature:963711-963883:1:exon
so has part: feature:963975-964054:1:exon
so has part: feature:964391-964453:1:exon
so has part: feature:965759-965854:1:exon
so has part: feature:966130-966217:1:exon
so has part: feature:967291-967482:1:exon
so has part: feature:967761-967823:1:exon
so has part: feature:968025-968075:1:exon

position:968075:1
position: 968075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959673-959844:1:exon

position:959844:1
position: 959844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:963711-963883:1:exon

position:963711:1
position: 963711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963883:1
position: 963883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:963975-964054:1:exon

position:963975:1
position: 963975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964054:1
position: 964054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:964391-964453:1:exon

position:964391:1
position: 964391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964453:1
position: 964453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:965759-965854:1:exon

position:965759:1
position: 965759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965854:1
position: 965854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:966130-966217:1:exon

position:966130:1
position: 966130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966217:1
position: 966217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:967291-967482:1:exon

position:967291:1
position: 967291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967482:1
position: 967482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:967761-967823:1:exon

position:967761:1
position: 967761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967823:1
position: 967823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:968025-968075:1:exon

position:968025:1
position: 968025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cd74
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cd74
product: CD74 molecule, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048331150.1
SIO_010081: Cd74
subclass of: SO_0000673
so part of: Cd74
location: join(959677..959844,963711..963883,963975..964054,964391..964453,965759..965854,966130..966217,967761..967823,968025..968105)
location: region:959677-968105:1
so has part: feature:959677-959844:1:exon
so has part: feature:963711-963883:1:exon
so has part: feature:963975-964054:1:exon
so has part: feature:964391-964453:1:exon
so has part: feature:965759-965854:1:exon
so has part: feature:966130-966217:1:exon
so has part: feature:967761-967823:1:exon
so has part: feature:968025-968105:1:exon

position:959677:1
position: 959677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959677-959844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:963711-963883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963975-964054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964391-964453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:965759-965854:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:966130-966217:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967761-967823:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:968025-968105:1:exon

Cd74
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cd74
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen gamma chain isoform X1
translation: MEDQSDLVSNNEQLPILGQRPGAQERKCGRGALYTGFSVLVALLLAGQAATAYFLYQQQGRLDKLTVTSQNLQLESMLMKLPKPSKPMKQMRMAAPLMMQALPMESLRHGPPQNATKYGNMTQDHVMHLLLRSNPLKVYPQLEGSFPENLKHLKSTMNGQDWKVFESWMHQWLLFEMSKKPLEEKPAEAPTRVLTKCQEEVSHVPAVHPGTFRPQCDENGHYLPLQCHGSTGYCWCVFPNGTEVPRTRSRGRPNCSEPLDAEELSSGLGVTKQDSGQVVM
SIO_010081: Cd74
subclass of: SO_0000673
so part of: Cd74
location: join(959768..959844,963711..963883,963975..964054,964391..964453,965759..965854,966130..966217,967291..967482,967761..967823,968025..968035)
location: region:959768-968035:1
so has part: feature:959768-959844:1:exon
so has part: feature:963711-963883:1:exon
so has part: feature:963975-964054:1:exon
so has part: feature:964391-964453:1:exon
so has part: feature:965759-965854:1:exon
so has part: feature:966130-966217:1:exon
so has part: feature:967291-967482:1:exon
so has part: feature:967761-967823:1:exon
so has part: feature:968025-968035:1:exon

XP_048187106.1
type: Protein
SIO_000068: ncbiprotein

position:959768:1
position: 959768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968035:1
position: 968035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959768-959844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:963711-963883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963975-964054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964391-964453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:965759-965854:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:966130-966217:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967291-967482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:967761-967823:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:968025-968035:1:exon

Cd74
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cd74
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen gamma chain isoform X2
translation: MEDQSDLVSNNEQLPILGQRPGAQERKCGRGALYTGFSVLVALLLAGQAATAYFLYQQQGRLDKLTVTSQNLQLESMLMKLPKPSKPMKQMRMAAPLMMQALPMESLRHGPPQNATKYGNMTQDHVMHLLLRSNPLKVYPQLEGSFPENLKHLKSTMNGQDWKVFESWMHQWLLFEMSKKPLEEKPAEAPTREPLDAEELSSGLGVTKQDSGQVVM
SIO_010081: Cd74
subclass of: SO_0000673
so part of: Cd74
location: join(959768..959844,963711..963883,963975..964054,964391..964453,965759..965854,966130..966217,967761..967823,968025..968035)
location: region:959768-968035:1
so has part: feature:959768-959844:1:exon
so has part: feature:963711-963883:1:exon
so has part: feature:963975-964054:1:exon
so has part: feature:964391-964453:1:exon
so has part: feature:965759-965854:1:exon
so has part: feature:966130-966217:1:exon
so has part: feature:967761-967823:1:exon
so has part: feature:968025-968035:1:exon

XP_048187107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:959768-959844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:963711-963883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963975-964054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964391-964453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:965759-965854:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:966130-966217:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967761-967823:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:968025-968035:1:exon

Tcof1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tcof1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(969673..1002921)
location: region:969673-1002921:-1
so has part: feature:969673-1002921:-1:exon
subclass of: SO_0000010

125340171
type: Gene
SIO_000068: ncbigene

position:969673:-1
position: 969673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002921:-1
position: 1002921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969673-1002921:-1:exon

Tcof1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tcof1
product: treacle ribosome biogenesis factor 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331617.1
SIO_010081: Tcof1
subclass of: SO_0000673
so part of: Tcof1
location: complement(join(969673..970123,970264..970316,970494..970588,972153..972704,973482..973659,974096..974178,974823..974988,976514..976635,978001..978190,981840..981944,984164..984478,984585..984755,984855..984998,985164..985295,987336..987500,987886..988092,988352..988573,988656..988850,990389..990601,991487..991560,992090..992276,993672..993745,994315..994466,1000381..1000436,1002752..1002921))
location: region:969673-1002921:-1
so has part: feature:1002752-1002921:-1:exon
so has part: feature:1000381-1000436:-1:exon
so has part: feature:994315-994466:-1:exon
so has part: feature:993672-993745:-1:exon
so has part: feature:992090-992276:-1:exon
so has part: feature:991487-991560:-1:exon
so has part: feature:990389-990601:-1:exon
so has part: feature:988656-988850:-1:exon
so has part: feature:988352-988573:-1:exon
so has part: feature:987886-988092:-1:exon
so has part: feature:987336-987500:-1:exon
so has part: feature:985164-985295:-1:exon
so has part: feature:984855-984998:-1:exon
so has part: feature:984585-984755:-1:exon
so has part: feature:984164-984478:-1:exon
so has part: feature:981840-981944:-1:exon
so has part: feature:978001-978190:-1:exon
so has part: feature:976514-976635:-1:exon
so has part: feature:974823-974988:-1:exon
so has part: feature:974096-974178:-1:exon
so has part: feature:973482-973659:-1:exon
so has part: feature:972153-972704:-1:exon
so has part: feature:970494-970588:-1:exon
so has part: feature:970264-970316:-1:exon
so has part: feature:969673-970123:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1002752-1002921:-1:exon

position:1002752:-1
position: 1002752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1000381-1000436:-1:exon

position:1000381:-1
position: 1000381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000436:-1
position: 1000436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:994315-994466:-1:exon

position:994315:-1
position: 994315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994466:-1
position: 994466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:993672-993745:-1:exon

position:993672:-1
position: 993672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993745:-1
position: 993745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:992090-992276:-1:exon

position:992090:-1
position: 992090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992276:-1
position: 992276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:991487-991560:-1:exon

position:991487:-1
position: 991487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991560:-1
position: 991560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:990389-990601:-1:exon

position:990389:-1
position: 990389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990601:-1
position: 990601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:988656-988850:-1:exon

position:988656:-1
position: 988656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988850:-1
position: 988850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:988352-988573:-1:exon

position:988352:-1
position: 988352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988573:-1
position: 988573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:987886-988092:-1:exon

position:987886:-1
position: 987886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988092:-1
position: 988092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:987336-987500:-1:exon

position:987336:-1
position: 987336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987500:-1
position: 987500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:985164-985295:-1:exon

position:985164:-1
position: 985164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985295:-1
position: 985295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:984855-984998:-1:exon

position:984855:-1
position: 984855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984998:-1
position: 984998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:984585-984755:-1:exon

position:984585:-1
position: 984585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984755:-1
position: 984755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:984164-984478:-1:exon

position:984164:-1
position: 984164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984478:-1
position: 984478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:981840-981944:-1:exon

position:981840:-1
position: 981840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981944:-1
position: 981944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:978001-978190:-1:exon

position:978001:-1
position: 978001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978190:-1
position: 978190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:976514-976635:-1:exon

position:976514:-1
position: 976514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976635:-1
position: 976635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:974823-974988:-1:exon

position:974823:-1
position: 974823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974988:-1
position: 974988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:974096-974178:-1:exon

position:974096:-1
position: 974096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974178:-1
position: 974178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:973482-973659:-1:exon

position:973482:-1
position: 973482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973659:-1
position: 973659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:972153-972704:-1:exon

position:972153:-1
position: 972153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972704:-1
position: 972704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:970494-970588:-1:exon

position:970494:-1
position: 970494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970588:-1
position: 970588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:970264-970316:-1:exon

position:970264:-1
position: 970264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970316:-1
position: 970316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:969673-970123:-1:exon

position:970123:-1
position: 970123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tcof1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tcof1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: treacle protein
translation: MAEARKRRELLPLIYQHLLHAGYVRAAREVKEQSGQKNLLAQPVTLLDIYTHWQQTSELGQKQKAEDDAALQAKKTRVSDPISTSESSEEEEEEEGEAGAEATKAALRVASTNSSMTTAESPSSRKEKGQAKTKTASKTVNSMPRANAGKALIHLLSGKSPKKAAQPSANAILVPETEEEGSVQTLRSTARPGMVSVARPSSSSEDTSSSSDETNVEVKPSVKPAQVKTLPAPTKAPPAGRAAPGPEKAGDVMRHTGGAALTPARRAIKPGTESESSEEEAPTGTPNQVKASGKVPQVRAASASAKPTPATPGRPGPSATPATRGRLGQDAESSSEESSDSEEEAPVALAPLQAKPPVKTAQVRAASAPAKESPQKRAPPAAPMKTAPGGAQAATPKPEDSDSSSAEDSDSEGETPAAMAPTASPAQAKTSGKSLPTRPAPDPAKGSLGKGAAPGPPQKTGPATTQAKAEEHSESSEDASDSEEEEAAAAGVTAAQGTCVGRGPVGRAASGPGPTPALPGTMGPAGAQVGDSESSEEDESSGGEAAAAPAQARPSRNASEARASPASTKAPSIKGAAPGKVATAVAQARQVTPSKEKPPARAPPSSAVTARAPAQKGSTVGGKEDSDSSSETSDSEEEAAPAPTKPSTKTAAVSTVSVPAKAPPGKTGPAAARALAGKREEDSNSSSEASDSGEEVAPAQTKPSAKTASVRATSAPAKESSKKAPPAPAKESSKKAPPAPAKESPKKAPPAPAKESPKKAPPAPAGKTGPAAARAPAGKREEDSESSSEASDSEEEAPAAVTPVQDATSNTTKSKALTPAPPQDTEDSSDSSDDELPCSQVIKPPLIFVDPNRSPAGPAATPTQSRAASTPRKAQASDSSTECSSSESEDDASVIPATQSSTPAVRAKGAPVPAAPTRGAPRVGSSEESSWVPKGKKQEAAAAQVGNAVAPPQSTPVQARVSSKCRTPKLPVGHSKAKAPDSSGDSDDSSSTSSEGQRDGSALSRRETVVEETTSDSSEDEMVAPSQSLLSGYVSPGLTLANSQAPKATGEPHSSPAVPSAPARDDPDGRPGAEPQHTAGPVSPKRGRKEAASGTPPKPRKKKGAVGVAGAAGAACTQALQSSLAQHLLGQPWPLSEAQVQASVVKVLTQLLEQERKKVADATRDSGKKSRKRKLSGDQPAAGPPKSKKKKAAAGEGGEGAVSPEKASRTPKGRSKKDRGNGDMKEKKGKGPPGPPGAKDEPGGKLGMAKAEGGEENGAKSQKGKKKSSKKKKDKEKKEKKKKAKKITKDPDAPFQKKKKKKKKTAEQAV
SIO_010081: Tcof1
subclass of: SO_0000673
so part of: Tcof1
location: complement(join(970290..970316,970494..970588,972153..972704,973482..973659,974096..974178,974823..974988,976514..976635,978001..978190,981840..981944,984164..984478,984585..984755,984855..984998,985164..985295,987336..987500,987886..988092,988352..988573,988656..988850,990389..990601,991487..991560,992090..992276,993672..993745,994315..994466,1000381..1000436,1002752..1002859))
location: region:970290-1002859:-1
so has part: feature:1002752-1002859:-1:exon
so has part: feature:1000381-1000436:-1:exon
so has part: feature:994315-994466:-1:exon
so has part: feature:993672-993745:-1:exon
so has part: feature:992090-992276:-1:exon
so has part: feature:991487-991560:-1:exon
so has part: feature:990389-990601:-1:exon
so has part: feature:988656-988850:-1:exon
so has part: feature:988352-988573:-1:exon
so has part: feature:987886-988092:-1:exon
so has part: feature:987336-987500:-1:exon
so has part: feature:985164-985295:-1:exon
so has part: feature:984855-984998:-1:exon
so has part: feature:984585-984755:-1:exon
so has part: feature:984164-984478:-1:exon
so has part: feature:981840-981944:-1:exon
so has part: feature:978001-978190:-1:exon
so has part: feature:976514-976635:-1:exon
so has part: feature:974823-974988:-1:exon
so has part: feature:974096-974178:-1:exon
so has part: feature:973482-973659:-1:exon
so has part: feature:972153-972704:-1:exon
so has part: feature:970494-970588:-1:exon
so has part: feature:970290-970316:-1:exon

XP_048187574.1
type: Protein
SIO_000068: ncbiprotein

position:970290:-1
position: 970290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002859:-1
position: 1002859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002752-1002859:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1000381-1000436:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:994315-994466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:993672-993745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:992090-992276:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:991487-991560:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:990389-990601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:988656-988850:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:988352-988573:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987886-988092:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:987336-987500:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:985164-985295:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:984855-984998:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:984585-984755:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:984164-984478:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:981840-981944:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:978001-978190:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:976514-976635:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:974823-974988:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:974096-974178:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:973482-973659:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:972153-972704:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:970494-970588:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:970290-970316:-1:exon

LOC125340230
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125340230
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(970945..971044)
location: region:970945-971044:-1
so has part: feature:970945-971044:-1:exon

125340230
type: Gene
SIO_000068: ncbigene

position:970945:-1
position: 970945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971044:-1
position: 971044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970945-971044:-1:exon

LOC125340230
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125340230
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC125340230
subclass of: SO_0000673
so part of: LOC125340230
location: complement(970945..971044)
location: region:970945-971044:-1
so has part: feature:970945-971044:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:970945-971044:-1:exon

LOC125340126
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125340126
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1016283..1025686
location: region:1016283-1025686:1
so has part: feature:1016283-1025686:1:exon
subclass of: SO_0000011

125340126
type: Gene
SIO_000068: ncbigene

position:1016283:1
position: 1016283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025686:1
position: 1025686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016283-1025686:1:exon

LOC125340126
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125340126
product: uncharacterized LOC125340126
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007208691.1
SIO_010081: LOC125340126
subclass of: SO_0000673
so part of: LOC125340126
location: join(1016283..1016346,1017878..1018062,1025548..1025686)
location: region:1016283-1025686:1
so has part: feature:1016283-1016346:1:exon
so has part: feature:1017878-1018062:1:exon
so has part: feature:1025548-1025686:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1016283-1016346:1:exon

position:1016346:1
position: 1016346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1017878-1018062:1:exon

position:1017878:1
position: 1017878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018062:1
position: 1018062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1025548-1025686:1:exon

position:1025548:1
position: 1025548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Arsi
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Arsi
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1049080..1054857
location: region:1049080-1054857:1
so has part: feature:1049080-1054857:1:exon
subclass of: SO_0000010

125339992
type: Gene
SIO_000068: ncbigene

position:1049080:1
position: 1049080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054857:1
position: 1054857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1049080-1054857:1:exon

Arsi
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arsi
product: arylsulfatase family member I
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048331350.1
SIO_010081: Arsi
subclass of: SO_0000673
so part of: Arsi
location: join(1049080..1049424,1053424..1054857)
location: region:1049080-1054857:1
so has part: feature:1049080-1049424:1:exon
so has part: feature:1053424-1054857:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1049080-1049424:1:exon

position:1049424:1
position: 1049424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1053424-1054857:1:exon

position:1053424:1
position: 1053424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Arsi
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arsi
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: arylsulfatase I
translation: MHALTGFSLVSLLSLGYLSWDWAKPSLVADGPGEADAQPPPPPAPSQPPHIIFILTDDQGYHDVGYHGSDIETPTLDRLAAEGVKLENYYIQPICTPSRSQLLTGRYQIHTGLQHSIIRPRQPNCLPLDQVTLPQRLREAGYSTHMVGKWHLGFYRKACLPTRRGFDTFLGSLTGNVDYYTYDNCDGPGVCGFDLHEGEDVAWGLSGQYSTLLYARRVSRILASHSPRRPLFLYVAFQAVHTPLQSPREYLYRYRGLGNAARRKYAAMVTCMDEAVRNITRALKRYGFYNNSVIVFSSDNGGQTFSGGSNWPLRGRKGTYWEGGVRGLGFVHSPLLKRKRRTSRALVHITDWYPTLVGLAGGAAAAAEGLDGYDVWPAISEGRASPRTEILHNIDPLYNHARHGSLEGGFGIWNTAVQAAIRVGEWKLLTGDPGYGDWIPPQTLAAFPGGWWDLERMAGARQALWLFNISADPYEREDLAGRRPDVVRTLLARLADYNRTAIPVRYPAENPRAHPDFNGGAWGPWASDEEEEAEEEEEEEGEEEEGSRARSFSRGRRKKKCKLCRLRSFFRKLNARPMSHRI
SIO_010081: Arsi
subclass of: SO_0000673
so part of: Arsi
location: join(1049108..1049424,1053424..1054857)
location: region:1049108-1054857:1
so has part: feature:1049108-1049424:1:exon
so has part: feature:1053424-1054857:1:exon

XP_048187307.1
type: Protein
SIO_000068: ncbiprotein

position:1049108:1
position: 1049108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1049108-1049424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1053424-1054857:1:exon

Camk2a
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Camk2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1062941..1110478
location: region:1062941-1110478:1
so has part: feature:1062941-1110478:1:exon
subclass of: SO_0000010

125340006
type: Gene
SIO_000068: ncbigene

position:1062941:1
position: 1062941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110478:1
position: 1110478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062941-1110478:1:exon

Camk2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Camk2a
product: calcium/calmodulin dependent protein kinase II alpha
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon
transcript id: XM_048331385.1
SIO_010081: Camk2a
subclass of: SO_0000673
so part of: Camk2a
location: join(1062941..1063002,1077773..1077867,1080591..1080650,1085009..1085063,1087122..1087187,1087274..1087346,1089123..1089225,1091618..1091709,1091783..1091877,1092353..1092476,1092743..1092826,1093650..1093692,1099136..1099210,1101443..1101537,1106275..1106503,1108146..1110478)
location: region:1062941-1110478:1
so has part: feature:1062941-1063002:1:exon
so has part: feature:1077773-1077867:1:exon
so has part: feature:1080591-1080650:1:exon
so has part: feature:1085009-1085063:1:exon
so has part: feature:1087122-1087187:1:exon
so has part: feature:1087274-1087346:1:exon
so has part: feature:1089123-1089225:1:exon
so has part: feature:1091618-1091709:1:exon
so has part: feature:1091783-1091877:1:exon
so has part: feature:1092353-1092476:1:exon
so has part: feature:1092743-1092826:1:exon
so has part: feature:1093650-1093692:1:exon
so has part: feature:1099136-1099210:1:exon
so has part: feature:1101443-1101537:1:exon
so has part: feature:1106275-1106503:1:exon
so has part: feature:1108146-1110478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1062941-1063002:1:exon

position:1063002:1
position: 1063002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1077773-1077867:1:exon

position:1077773:1
position: 1077773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077867:1
position: 1077867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1080591-1080650:1:exon

position:1080591:1
position: 1080591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080650:1
position: 1080650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1085009-1085063:1:exon

position:1085009:1
position: 1085009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085063:1
position: 1085063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1087122-1087187:1:exon

position:1087122:1
position: 1087122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087187:1
position: 1087187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1087274-1087346:1:exon

position:1087274:1
position: 1087274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087346:1
position: 1087346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1089123-1089225:1:exon

position:1089123:1
position: 1089123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089225:1
position: 1089225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1091618-1091709:1:exon

position:1091618:1
position: 1091618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091709:1
position: 1091709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1091783-1091877:1:exon

position:1091783:1
position: 1091783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091877:1
position: 1091877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1092353-1092476:1:exon

position:1092353:1
position: 1092353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092476:1
position: 1092476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1092743-1092826:1:exon

position:1092743:1
position: 1092743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092826:1
position: 1092826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1093650-1093692:1:exon

position:1093650:1
position: 1093650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093692:1
position: 1093692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1099136-1099210:1:exon

position:1099136:1
position: 1099136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099210:1
position: 1099210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1101443-1101537:1:exon

position:1101443:1
position: 1101443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101537:1
position: 1101537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1106275-1106503:1:exon

position:1106275:1
position: 1106275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106503:1
position: 1106503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1108146-1110478:1:exon

position:1108146:1
position: 1108146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Camk2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Camk2a
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: calcium/calmodulin-dependent protein kinase type II subunit alpha
translation: MATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGECGVILYILLVGYXPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSVRKQEIIKVTEQLIEAIXHGDFESYTKMCDPGMTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDAGGVPRTAQSEETRVWHRRDGKWQIVHFHRSGAPSVLPH
SIO_010081: Camk2a
subclass of: SO_0000673
so part of: Camk2a
location: join(1062941..1063002,1077773..1077867,1080591..1080650,1085009..1085063,1087122..1087187,1087274..1087346,1089123..1089225,1091618..1091709,1091783..1091877,1092353..1092476,1092743..1092826,1093650..1093692,1099136..1099210,1101443..1101537,1106275..1106503,1108146..1108149)
location: region:1062941-1108149:1
so has part: feature:1062941-1063002:1:exon
so has part: feature:1077773-1077867:1:exon
so has part: feature:1080591-1080650:1:exon
so has part: feature:1085009-1085063:1:exon
so has part: feature:1087122-1087187:1:exon
so has part: feature:1087274-1087346:1:exon
so has part: feature:1089123-1089225:1:exon
so has part: feature:1091618-1091709:1:exon
so has part: feature:1091783-1091877:1:exon
so has part: feature:1092353-1092476:1:exon
so has part: feature:1092743-1092826:1:exon
so has part: feature:1093650-1093692:1:exon
so has part: feature:1099136-1099210:1:exon
so has part: feature:1101443-1101537:1:exon
so has part: feature:1106275-1106503:1:exon
so has part: feature:1108146-1108149:1:exon

XP_048187342.1
type: Protein
SIO_000068: ncbiprotein

position:1108149:1
position: 1108149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062941-1063002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077773-1077867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080591-1080650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085009-1085063:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1087122-1087187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1087274-1087346:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1089123-1089225:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1091618-1091709:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1091783-1091877:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092353-1092476:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1092743-1092826:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1093650-1093692:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1099136-1099210:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1101443-1101537:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1106275-1106503:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1108146-1108149:1:exon

Slc6a7
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Slc6a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1117073..1132762)
location: region:1117073-1132762:-1
so has part: feature:1117073-1132762:-1:exon
subclass of: SO_0000010

125340007
type: Gene
SIO_000068: ncbigene

position:1117073:-1
position: 1117073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132762:-1
position: 1132762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1117073-1132762:-1:exon

Slc6a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slc6a7
product: solute carrier family 6 member 7
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331386.1
SIO_010081: Slc6a7
subclass of: SO_0000673
so part of: Slc6a7
location: complement(join(1117073..1117288,1119122..1119289,1119510..1119610,1119748..1119847,1120616..1120748,1120844..1120956,1121837..1121960,1122064..1122167,1122427..1122561,1123149..1123286,1126491..1126723,1126823..1126954,1128289..1128471,1131241,1132730..1132762))
location: region:1117073-1132762:-1
so has part: feature:1132730-1132762:-1:exon
so has part: feature:1131241-1131241:-1:exon
so has part: feature:1128289-1128471:-1:exon
so has part: feature:1126823-1126954:-1:exon
so has part: feature:1126491-1126723:-1:exon
so has part: feature:1123149-1123286:-1:exon
so has part: feature:1122427-1122561:-1:exon
so has part: feature:1122064-1122167:-1:exon
so has part: feature:1121837-1121960:-1:exon
so has part: feature:1120844-1120956:-1:exon
so has part: feature:1120616-1120748:-1:exon
so has part: feature:1119748-1119847:-1:exon
so has part: feature:1119510-1119610:-1:exon
so has part: feature:1119122-1119289:-1:exon
so has part: feature:1117073-1117288:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1132730-1132762:-1:exon

position:1132730:-1
position: 1132730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1131241-1131241:-1:exon

position:1131241:-1
position: 1131241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1128289-1128471:-1:exon

position:1128289:-1
position: 1128289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1128471:-1
position: 1128471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1126823-1126954:-1:exon

position:1126823:-1
position: 1126823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126954:-1
position: 1126954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1126491-1126723:-1:exon

position:1126491:-1
position: 1126491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126723:-1
position: 1126723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1123149-1123286:-1:exon

position:1123149:-1
position: 1123149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123286:-1
position: 1123286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1122427-1122561:-1:exon

position:1122427:-1
position: 1122427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1122561:-1
position: 1122561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1122064-1122167:-1:exon

position:1122064:-1
position: 1122064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1122167:-1
position: 1122167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1121837-1121960:-1:exon

position:1121837:-1
position: 1121837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1121960:-1
position: 1121960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1120844-1120956:-1:exon

position:1120844:-1
position: 1120844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120956:-1
position: 1120956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1120616-1120748:-1:exon

position:1120616:-1
position: 1120616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120748:-1
position: 1120748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1119748-1119847:-1:exon

position:1119748:-1
position: 1119748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119847:-1
position: 1119847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1119510-1119610:-1:exon

position:1119510:-1
position: 1119510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119610:-1
position: 1119610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1119122-1119289:-1:exon

position:1119122:-1
position: 1119122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119289:-1
position: 1119289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1117073-1117288:-1:exon

position:1117288:-1
position: 1117288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc6a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slc6a7
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sodium-dependent proline transporter
translation: MKKLRGAHLPKPRHPDLLMTPSDQGDVDLDVDFAADRGNWTGKLDFLLSCIGYCVGLGNVWRFPYRAYTNGGGAFLVPYFLMLAICGVPLFFLELSLGQFSSLGPXAVWKISPLFKGAGAAMLLIVGLVAIYYNMIIAYVLFYLFASLARELPWSTAXNWWNTERCLEHRGPRGANGSLSPNLSSTVSPSEEYWSRCVLHLXGSQGIGRPGEIRWNLCLCLLLAWVIVFLCILKGVRSSGKVVYFTATFPYLILLMLLVRGVTLPGAWKGIQFYLTPRFHHLLSSKVWIEAALQIFYSLGVGFGGLLTFASYNTFHQNIYRDTFIVTLGNAITSILAGFAIFSVLGYMSQEXGVPVDQVAKAGPGLAFVVYPQAMTMLPLSPFWSFLFFFMLLTLGLDSQFAFLETIVTAVTDEFPYYLRPKKAVFSGLICVAMYLMGLILTTDGGMYWLVLLDDYSASFGLMVVVITTCLAVTRVYGIQRFCRDIHMMLGFKPGLYFRACWLFLSPATLLALLVYSIVKYQPSTYGSYRFPAWAELLGILMGLLSCLMIPAGMLLAVLREEGSLWERLQQASRPAMDWGPSLEENRTGMYVATLAGSQSPKPLMVHMRKYGGVTSFENTAIEVDREMAEEEEEESMM
SIO_010081: Slc6a7
subclass of: SO_0000673
so part of: Slc6a7
location: complement(join(1117073..1117288,1119122..1119289,1119510..1119610,1119748..1119847,1120616..1120748,1120844..1120956,1121837..1121960,1122064..1122167,1122427..1122561,1123149..1123286,1126491..1126723,1126823..1126954,1128289..1128471,1131241,1132730..1132762))
location: region:1117073-1132762:-1
so has part: feature:1132730-1132762:-1:exon
so has part: feature:1131241-1131241:-1:exon
so has part: feature:1128289-1128471:-1:exon
so has part: feature:1126823-1126954:-1:exon
so has part: feature:1126491-1126723:-1:exon
so has part: feature:1123149-1123286:-1:exon
so has part: feature:1122427-1122561:-1:exon
so has part: feature:1122064-1122167:-1:exon
so has part: feature:1121837-1121960:-1:exon
so has part: feature:1120844-1120956:-1:exon
so has part: feature:1120616-1120748:-1:exon
so has part: feature:1119748-1119847:-1:exon
so has part: feature:1119510-1119610:-1:exon
so has part: feature:1119122-1119289:-1:exon
so has part: feature:1117073-1117288:-1:exon

XP_048187343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1132730-1132762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1131241-1131241:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1128289-1128471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1126823-1126954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1126491-1126723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1123149-1123286:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1122427-1122561:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1122064-1122167:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1121837-1121960:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1120844-1120956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1120616-1120748:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1119748-1119847:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1119510-1119610:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1119122-1119289:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1117073-1117288:-1:exon

Cdx1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Cdx1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1141428..1153798)
location: region:1141428-1153798:-1
so has part: feature:1141428-1153798:-1:exon
subclass of: SO_0000010

125340076
type: Gene
SIO_000068: ncbigene

position:1141428:-1
position: 1141428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153798:-1
position: 1153798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1141428-1153798:-1:exon

Cdx1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cdx1
product: caudal type homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
transcript id: XM_048331496.1
SIO_010081: Cdx1
subclass of: SO_0000673
so part of: Cdx1
location: complement(join(1141428..1141634,1142042..1142187,1153393..1153798))
location: region:1141428-1153798:-1
so has part: feature:1153393-1153798:-1:exon
so has part: feature:1142042-1142187:-1:exon
so has part: feature:1141428-1141634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1153393-1153798:-1:exon

position:1153393:-1
position: 1153393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1142042-1142187:-1:exon

position:1142042:-1
position: 1142042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142187:-1
position: 1142187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1141428-1141634:-1:exon

position:1141634:-1
position: 1141634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cdx1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cdx1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein CDX-1
translation: MYVGYVPDKDAPAYPGPAGLGLGPQAYGPPAPPQYPDFAGYAPAEPPPAPPAAWAAPFPAPKDDWTAAYGPGPAAPAAFGPAPDFGPVPAPPGPGPGLLPQPLGAPGAPSSPRPPRRTPYEWMRRGAAAGGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAATLGLTERQVKIWFQNRRAKERKVNKKKQPPPPPQQLPPVLDGAPAPAGPPLGSLCPSNAGLLGVSSPVSVKEEFLP
SIO_010081: Cdx1
subclass of: SO_0000673
so part of: Cdx1
location: complement(join(1141428..1141634,1142042..1142187,1153393..1153798))
location: region:1141428-1153798:-1
so has part: feature:1153393-1153798:-1:exon
so has part: feature:1142042-1142187:-1:exon
so has part: feature:1141428-1141634:-1:exon

XP_048187453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1153393-1153798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142042-1142187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1141428-1141634:-1:exon

Pdgfrb
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Pdgfrb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1181468..1202673
location: region:1181468-1202673:1
so has part: feature:1181468-1202673:1:exon
subclass of: SO_0000010

125339985
type: Gene
SIO_000068: ncbigene

position:1181468:1
position: 1181468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202673:1
position: 1202673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1181468-1202673:1:exon

Pdgfrb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pdgfrb
product: platelet derived growth factor receptor beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331341.1
SIO_010081: Pdgfrb
subclass of: SO_0000673
so part of: Pdgfrb
location: join(1181468..1181802,1181919..1181964,1183078..1183401,1184442..1184708,1185946..1186073,1186174..1186348,1186467..1186659,1187167..1187282,1188167..1188290,1188789..1189000,1192157..1192251,1193060..1193195,1194893..1194994,1195192..1195302,1196427..1196586,1197908..1198068,1198545..1198654,1198820..1198942,1199324..1199435,1200126..1200225,1200455..1200560,1201290..1201522,1202237..1202673)
location: region:1181468-1202673:1
so has part: feature:1181468-1181802:1:exon
so has part: feature:1181919-1181964:1:exon
so has part: feature:1183078-1183401:1:exon
so has part: feature:1184442-1184708:1:exon
so has part: feature:1185946-1186073:1:exon
so has part: feature:1186174-1186348:1:exon
so has part: feature:1186467-1186659:1:exon
so has part: feature:1187167-1187282:1:exon
so has part: feature:1188167-1188290:1:exon
so has part: feature:1188789-1189000:1:exon
so has part: feature:1192157-1192251:1:exon
so has part: feature:1193060-1193195:1:exon
so has part: feature:1194893-1194994:1:exon
so has part: feature:1195192-1195302:1:exon
so has part: feature:1196427-1196586:1:exon
so has part: feature:1197908-1198068:1:exon
so has part: feature:1198545-1198654:1:exon
so has part: feature:1198820-1198942:1:exon
so has part: feature:1199324-1199435:1:exon
so has part: feature:1200126-1200225:1:exon
so has part: feature:1200455-1200560:1:exon
so has part: feature:1201290-1201522:1:exon
so has part: feature:1202237-1202673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1181468-1181802:1:exon

position:1181802:1
position: 1181802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1181919-1181964:1:exon

position:1181919:1
position: 1181919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181964:1
position: 1181964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1183078-1183401:1:exon

position:1183078:1
position: 1183078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183401:1
position: 1183401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1184442-1184708:1:exon

position:1184442:1
position: 1184442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184708:1
position: 1184708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1185946-1186073:1:exon

position:1185946:1
position: 1185946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186073:1
position: 1186073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1186174-1186348:1:exon

position:1186174:1
position: 1186174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186348:1
position: 1186348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1186467-1186659:1:exon

position:1186467:1
position: 1186467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186659:1
position: 1186659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1187167-1187282:1:exon

position:1187167:1
position: 1187167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187282:1
position: 1187282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1188167-1188290:1:exon

position:1188167:1
position: 1188167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188290:1
position: 1188290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1188789-1189000:1:exon

position:1188789:1
position: 1188789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189000:1
position: 1189000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1192157-1192251:1:exon

position:1192157:1
position: 1192157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1192251:1
position: 1192251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1193060-1193195:1:exon

position:1193060:1
position: 1193060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193195:1
position: 1193195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1194893-1194994:1:exon

position:1194893:1
position: 1194893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194994:1
position: 1194994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1195192-1195302:1:exon

position:1195192:1
position: 1195192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195302:1
position: 1195302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1196427-1196586:1:exon

position:1196427:1
position: 1196427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196586:1
position: 1196586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1197908-1198068:1:exon

position:1197908:1
position: 1197908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198068:1
position: 1198068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1198545-1198654:1:exon

position:1198545:1
position: 1198545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198654:1
position: 1198654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1198820-1198942:1:exon

position:1198820:1
position: 1198820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198942:1
position: 1198942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1199324-1199435:1:exon

position:1199324:1
position: 1199324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199435:1
position: 1199435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1200126-1200225:1:exon

position:1200126:1
position: 1200126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200225:1
position: 1200225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1200455-1200560:1:exon

position:1200455:1
position: 1200455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200560:1
position: 1200560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1201290-1201522:1:exon

position:1201290:1
position: 1201290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201522:1
position: 1201522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1202237-1202673:1:exon

position:1202237:1
position: 1202237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pdgfrb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pdgfrb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-derived growth factor receptor beta
translation: MGTVRPPGAMPARWLPGRLLWLPLLWLLGPRSSRGLVTAPPGPELVVNASSTVVLRCWGSAPVVWERLAGVPPQRLSRTRDGAFSSTLTLANATGLDTGEYFCAYNGSAGPESGDRRRLYVFVPDPAVVFLPQNSDDLFIFLMEVAETTIPCRVTDPHLEVTLHEKKVDTPLPVPYDHQRGFSGIFEDKTYICKTTVEDREVESDAYYIYSLQVSSINVSVSAVQTVVRQGENITILCIVTGTEVVNFEWTYPRLESGRKIEPVTDFLLDLPFHIRSILHVPSAELGDSGLYTCNVSESVTEHGDEKAVNVTVLEVGYVRLREEVNPVEVAELHQSRTLQVMFEAYPPPSVLWLKDNHTLGDSSAGEIILSTRNVSETWYVSELTLVRVKVEEAGYYTMVVFHEDAEAQLSFRLQVNVPVRMLELSESHPANGEQRVRCRGRGMPQPNVTWSICRDFKRCPRELPPAPLGNGSEGESQLETNVSYLAEEKEYEVVSTLRLRHVAQPLSVRCVLQNPLGRDAQEVTVVPHPLPFKVVVISAILALVVLTVISLIILIMLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRDRLVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSSARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKYTFLQHHADKPRPAGPELYSGALPTAPPLPSPVSLSGESDGGYMDMSRDESVDYVPMLAMKGDVRYADIEASDYMASYDNYRPSAPERATLINESPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGVLLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAQPPHAPDEIYEIMQKCWEEKFEIRPPFSQLVLLLERLLGEGYKKKYQQVDEEFLRSDHPAILRSQARFPGFQGLRPPLDTSSVLYTAVQPNGADNDYIIPLPDPKPELARQRPVEGSPSLASSTLNEANTASTISCDGPLDPQEEPGPPAAEPPPDPPRRPDSRGPPPPADVEDSFL
SIO_010081: Pdgfrb
subclass of: SO_0000673
so part of: Pdgfrb
location: join(1181800..1181802,1181919..1181964,1183078..1183401,1184442..1184708,1185946..1186073,1186174..1186348,1186467..1186659,1187167..1187282,1188167..1188290,1188789..1189000,1192157..1192251,1193060..1193195,1194893..1194994,1195192..1195302,1196427..1196586,1197908..1198068,1198545..1198654,1198820..1198942,1199324..1199435,1200126..1200225,1200455..1200560,1201290..1201522,1202237..1202405)
location: region:1181800-1202405:1
so has part: feature:1181800-1181802:1:exon
so has part: feature:1181919-1181964:1:exon
so has part: feature:1183078-1183401:1:exon
so has part: feature:1184442-1184708:1:exon
so has part: feature:1185946-1186073:1:exon
so has part: feature:1186174-1186348:1:exon
so has part: feature:1186467-1186659:1:exon
so has part: feature:1187167-1187282:1:exon
so has part: feature:1188167-1188290:1:exon
so has part: feature:1188789-1189000:1:exon
so has part: feature:1192157-1192251:1:exon
so has part: feature:1193060-1193195:1:exon
so has part: feature:1194893-1194994:1:exon
so has part: feature:1195192-1195302:1:exon
so has part: feature:1196427-1196586:1:exon
so has part: feature:1197908-1198068:1:exon
so has part: feature:1198545-1198654:1:exon
so has part: feature:1198820-1198942:1:exon
so has part: feature:1199324-1199435:1:exon
so has part: feature:1200126-1200225:1:exon
so has part: feature:1200455-1200560:1:exon
so has part: feature:1201290-1201522:1:exon
so has part: feature:1202237-1202405:1:exon

XP_048187298.1
type: Protein
SIO_000068: ncbiprotein

position:1181800:1
position: 1181800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202405:1
position: 1202405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1181800-1181802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1181919-1181964:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183078-1183401:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1184442-1184708:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1185946-1186073:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1186174-1186348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1186467-1186659:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187167-1187282:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1188167-1188290:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1188789-1189000:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1192157-1192251:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1193060-1193195:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1194893-1194994:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1195192-1195302:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1196427-1196586:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1197908-1198068:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1198545-1198654:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1198820-1198942:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1199324-1199435:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1200126-1200225:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1200455-1200560:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1201290-1201522:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1202237-1202405:1:exon

LOC125340172
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125340172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1203540..1225545)
location: region:1203540-1225545:-1
so has part: feature:1203540-1225545:-1:exon
subclass of: SO_0000010

125340172
type: Gene
SIO_000068: ncbigene

position:1203540:-1
position: 1203540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225545:-1
position: 1225545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203540-1225545:-1:exon

LOC125340172
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125340172
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048331618.1
SIO_010081: LOC125340172
subclass of: SO_0000673
so part of: LOC125340172
location: complement(join(1203540..1203821,1204270..1204589,1204829..1204961,1205173..1205187,1218021..1218190,1218338..1218400,1218500..1219012,1222930..1223316,1224971..1225033,1225140..1225545))
location: region:1203540-1225545:-1
so has part: feature:1225140-1225545:-1:exon
so has part: feature:1224971-1225033:-1:exon
so has part: feature:1222930-1223316:-1:exon
so has part: feature:1218500-1219012:-1:exon
so has part: feature:1218338-1218400:-1:exon
so has part: feature:1218021-1218190:-1:exon
so has part: feature:1205173-1205187:-1:exon
so has part: feature:1204829-1204961:-1:exon
so has part: feature:1204270-1204589:-1:exon
so has part: feature:1203540-1203821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225140-1225545:-1:exon

position:1225140:-1
position: 1225140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1224971-1225033:-1:exon

position:1224971:-1
position: 1224971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225033:-1
position: 1225033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1222930-1223316:-1:exon

position:1222930:-1
position: 1222930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223316:-1
position: 1223316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1218500-1219012:-1:exon

position:1218500:-1
position: 1218500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219012:-1
position: 1219012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1218338-1218400:-1:exon

position:1218338:-1
position: 1218338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218400:-1
position: 1218400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1218021-1218190:-1:exon

position:1218021:-1
position: 1218021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218190:-1
position: 1218190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1205173-1205187:-1:exon

position:1205173:-1
position: 1205173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205187:-1
position: 1205187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1204829-1204961:-1:exon

position:1204829:-1
position: 1204829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204961:-1
position: 1204961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1204270-1204589:-1:exon

position:1204270:-1
position: 1204270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204589:-1
position: 1204589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1203540-1203821:-1:exon

position:1203821:-1
position: 1203821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125340172
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125340172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MWPVPIPGPLPRPEPGARLASRPLLVLPPSRGPSTVDTAPRAPDGTPLQAVTPPSDLQHSCGLPPNRSGGDGHLRGRGGGGGGEKGPRAVPLEPDHLPGSGVLDPVVLSAHGPELPGGLSLQGESQDSSLSADQSASSGEPRGPRDPSSVAPSAGLAEGTGVPLAFPRTPPQMPRSTALGQRRQPLVFASGPFLPQPLREGRAPAASPRPTPPSIGAGRPGRSGQNAEPPVPPRPQILPRSPSPPPGTRRLALVYSGATRPPGGGPQKPCEGRGRAQENPEVQGRNEERKGGGGPQPGRRRGRVDCRGLGLEECGHCLPLGDVASANPRAPPAPRAGGPACLPATPRPAAFPGAQHRGHGPKGSRRHPSPGRDPPSDLQHSCGLPPNRSGGDGHLRGRGGGGGGEKGPRAVPLEPDHLPGSGVLDPVVLSAHGPELPGGLSLQGESQDSSLSADQSASSGEPRGPRDPSSVAPSAGLGSTPRAPPPRLAQALPVHSKPTDLFLIPGHSLGGKPQGELRVRQQRALLAAPGPGHQEREAPSSPFRLFLSGTRNPSQSWSRETGVQSQASEAWPVCPRVSGSRATGQAEAAGTPVSAPPSPRGGRSRWTASTQRAGGAPKWGGSGVCTHRPAAVRPRSPPLLPAPPPRSSHFLGALSAQSPSDPNPLSPGPGIRARPGASHQLPNLCEATGRTGVTASSKKPVNPAVLSLVPWGGALSTHRAPWDAGGRGAMPVRDGGVQKAVRPPSPFPPSPLEPFNCSAGSPGHRARRNQTLRGAVPGGASGG
SIO_010081: LOC125340172
subclass of: SO_0000673
so part of: LOC125340172
location: complement(join(1203540..1203821,1204270..1204589,1204829..1204961,1205173..1205187,1218021..1218190,1218338..1218400,1218500..1219012,1222930..1223316,1224971..1225033,1225140..1225545))
location: region:1203540-1225545:-1
so has part: feature:1225140-1225545:-1:exon
so has part: feature:1224971-1225033:-1:exon
so has part: feature:1222930-1223316:-1:exon
so has part: feature:1218500-1219012:-1:exon
so has part: feature:1218338-1218400:-1:exon
so has part: feature:1218021-1218190:-1:exon
so has part: feature:1205173-1205187:-1:exon
so has part: feature:1204829-1204961:-1:exon
so has part: feature:1204270-1204589:-1:exon
so has part: feature:1203540-1203821:-1:exon

XP_048187575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1225140-1225545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1224971-1225033:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1222930-1223316:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1218500-1219012:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1218338-1218400:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218021-1218190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1205173-1205187:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1204829-1204961:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1204270-1204589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1203540-1203821:-1:exon

Csf1r
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Csf1r
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1229105..1252232
location: region:1229105-1252232:1
so has part: feature:1229105-1252232:1:exon
subclass of: SO_0000010

125340058
type: Gene
SIO_000068: ncbigene

position:1229105:1
position: 1229105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252232:1
position: 1252232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1229105-1252232:1:exon

Csf1r
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Csf1r
product: colony stimulating factor 1 receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048331466.1
SIO_010081: Csf1r
subclass of: SO_0000673
so part of: Csf1r
location: join(1229105..1229344,1233584..1233841,1234344..1234628,1235333..1235469,1236457..1236616,1237358..1237544,1239006..1239121,1239229..1239349,1239448..1239641,1240442..1240548,1243746..1243872,1244013..1244117,1244519..1244629,1246264..1246426,1249508..1249596,1249682..1249779,1250517..1250639,1250718..1250829,1251093..1251192,1251506..1251614,1251697..1252232)
location: region:1229105-1252232:1
so has part: feature:1229105-1229344:1:exon
so has part: feature:1233584-1233841:1:exon
so has part: feature:1234344-1234628:1:exon
so has part: feature:1235333-1235469:1:exon
so has part: feature:1236457-1236616:1:exon
so has part: feature:1237358-1237544:1:exon
so has part: feature:1239006-1239121:1:exon
so has part: feature:1239229-1239349:1:exon
so has part: feature:1239448-1239641:1:exon
so has part: feature:1240442-1240548:1:exon
so has part: feature:1243746-1243872:1:exon
so has part: feature:1244013-1244117:1:exon
so has part: feature:1244519-1244629:1:exon
so has part: feature:1246264-1246426:1:exon
so has part: feature:1249508-1249596:1:exon
so has part: feature:1249682-1249779:1:exon
so has part: feature:1250517-1250639:1:exon
so has part: feature:1250718-1250829:1:exon
so has part: feature:1251093-1251192:1:exon
so has part: feature:1251506-1251614:1:exon
so has part: feature:1251697-1252232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1229105-1229344:1:exon

position:1229344:1
position: 1229344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1233584-1233841:1:exon

position:1233584:1
position: 1233584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233841:1
position: 1233841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1234344-1234628:1:exon

position:1234344:1
position: 1234344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234628:1
position: 1234628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1235333-1235469:1:exon

position:1235333:1
position: 1235333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235469:1
position: 1235469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1236457-1236616:1:exon

position:1236457:1
position: 1236457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236616:1
position: 1236616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1237358-1237544:1:exon

position:1237358:1
position: 1237358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237544:1
position: 1237544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1239006-1239121:1:exon

position:1239006:1
position: 1239006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239121:1
position: 1239121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1239229-1239349:1:exon

position:1239229:1
position: 1239229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239349:1
position: 1239349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1239448-1239641:1:exon

position:1239448:1
position: 1239448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239641:1
position: 1239641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1240442-1240548:1:exon

position:1240442:1
position: 1240442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240548:1
position: 1240548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1243746-1243872:1:exon

position:1243746:1
position: 1243746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243872:1
position: 1243872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1244013-1244117:1:exon

position:1244013:1
position: 1244013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244117:1
position: 1244117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1244519-1244629:1:exon

position:1244519:1
position: 1244519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244629:1
position: 1244629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1246264-1246426:1:exon

position:1246264:1
position: 1246264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246426:1
position: 1246426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1249508-1249596:1:exon

position:1249508:1
position: 1249508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249596:1
position: 1249596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1249682-1249779:1:exon

position:1249682:1
position: 1249682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249779:1
position: 1249779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1250517-1250639:1:exon

position:1250517:1
position: 1250517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250639:1
position: 1250639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1250718-1250829:1:exon

position:1250718:1
position: 1250718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250829:1
position: 1250829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1251093-1251192:1:exon

position:1251093:1
position: 1251093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251192:1
position: 1251192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1251506-1251614:1:exon

position:1251506:1
position: 1251506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251614:1
position: 1251614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1251697-1252232:1:exon

position:1251697:1
position: 1251697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Csf1r
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Csf1r
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: macrophage colony-stimulating factor 1 receptor
translation: MGLGTLLVLLAATARLGQGTPVIEPGGPELVVEPGAAVSLRCRGAGGARWEGPVSAPWSLDPAPAGGVLVTRNATFLHTGTYRCTETGGPRGGSASIHLYVKDPARPWKLLAETVTVLEGQDATLPCLLTDPALSPHASLVRARGRPVGRHTVSSFSPARGFTIHQAKYLDNELFQCRVLVDGRPVLSLGIRLHVRRVLKGPPALTLEPRELVRIRGESAHIACKATDPGVDFFVFLKHGDTQLNISQESDFRESKYQKVLALNLSAVDFRDSGNYSCLATNRMGVSSASTTLRVVESAYVNLSSEQTLLQEVTVGDSLELRVTAEAYPGLQAYSWTYLGPFSDHRPALDFVTTKDTYRYSSLLSLPRLKPSEAGHYAFRAQNAGGWSTLTFTVTLRYAPEVSVTWARVNGSDVLFCNASGYPPPNVTWLVCAGHEDSCERAQTLLRRWEDPEPAGLSREPFRRALVRSRLDVGLFQQNRTYECRARNRVGNSSDAVRAVTTEPVTKPPDGSLFTPVVASCLALMTFLLLLLLYKYKQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNDKWEFPRHNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGPHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLSPSQDPEGETSYKNVHLEKKYIRRDSGFSSQGMDTYVEMRPVSTSSSDSFPEQGLDKEEGRLLELWDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTSGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTQRPTFQQICFLLHKQAPAPRGEQDYANLPGGRSDGRDDGAEPEERAGEHPACCEPGATQPLLQPNNYQFC
SIO_010081: Csf1r
subclass of: SO_0000673
so part of: Csf1r
location: join(1229296..1229344,1233584..1233841,1234344..1234628,1235333..1235469,1236457..1236616,1237358..1237544,1239006..1239121,1239229..1239349,1239448..1239641,1240442..1240548,1243746..1243872,1244013..1244117,1244519..1244629,1246264..1246426,1249508..1249596,1249682..1249779,1250517..1250639,1250718..1250829,1251093..1251192,1251506..1251614,1251697..1251840)
location: region:1229296-1251840:1
so has part: feature:1229296-1229344:1:exon
so has part: feature:1233584-1233841:1:exon
so has part: feature:1234344-1234628:1:exon
so has part: feature:1235333-1235469:1:exon
so has part: feature:1236457-1236616:1:exon
so has part: feature:1237358-1237544:1:exon
so has part: feature:1239006-1239121:1:exon
so has part: feature:1239229-1239349:1:exon
so has part: feature:1239448-1239641:1:exon
so has part: feature:1240442-1240548:1:exon
so has part: feature:1243746-1243872:1:exon
so has part: feature:1244013-1244117:1:exon
so has part: feature:1244519-1244629:1:exon
so has part: feature:1246264-1246426:1:exon
so has part: feature:1249508-1249596:1:exon
so has part: feature:1249682-1249779:1:exon
so has part: feature:1250517-1250639:1:exon
so has part: feature:1250718-1250829:1:exon
so has part: feature:1251093-1251192:1:exon
so has part: feature:1251506-1251614:1:exon
so has part: feature:1251697-1251840:1:exon

XP_048187423.1
type: Protein
SIO_000068: ncbiprotein

position:1229296:1
position: 1229296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251840:1
position: 1251840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1229296-1229344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1233584-1233841:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1234344-1234628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1235333-1235469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1236457-1236616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1237358-1237544:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1239006-1239121:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1239229-1239349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1239448-1239641:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1240442-1240548:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1243746-1243872:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1244013-1244117:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1244519-1244629:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1246264-1246426:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1249508-1249596:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1249682-1249779:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1250517-1250639:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1250718-1250829:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1251093-1251192:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1251506-1251614:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1251697-1251840:1:exon

Hmgxb3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Hmgxb3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1252815..1295470)
location: region:1252815-1295470:-1
so has part: feature:1252815-1295470:-1:exon
subclass of: SO_0000010

125339820
type: Gene
SIO_000068: ncbigene

position:1252815:-1
position: 1252815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295470:-1
position: 1295470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1252815-1295470:-1:exon

Hmgxb3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hmgxb3
product: HMG-box containing 3, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331091.1
SIO_010081: Hmgxb3
subclass of: SO_0000673
so part of: Hmgxb3
location: complement(join(1252815..1254167,1256043..1256252,1257017..1257133,1257479..1257612,1259150..1259369,1261530..1261714,1262612..1262743,1264897..1265024,1265945..1266246,1269618..1269767,1271077..1271175,1274034..1274131,1274241..1274416,1275547..1275941,1279388..1279519,1284850..1284948,1286102..1286599,1290426..1290600,1291590..1291728,1295206..1295470))
location: region:1252815-1295470:-1
so has part: feature:1295206-1295470:-1:exon
so has part: feature:1291590-1291728:-1:exon
so has part: feature:1290426-1290600:-1:exon
so has part: feature:1286102-1286599:-1:exon
so has part: feature:1284850-1284948:-1:exon
so has part: feature:1279388-1279519:-1:exon
so has part: feature:1275547-1275941:-1:exon
so has part: feature:1274241-1274416:-1:exon
so has part: feature:1274034-1274131:-1:exon
so has part: feature:1271077-1271175:-1:exon
so has part: feature:1269618-1269767:-1:exon
so has part: feature:1265945-1266246:-1:exon
so has part: feature:1264897-1265024:-1:exon
so has part: feature:1262612-1262743:-1:exon
so has part: feature:1261530-1261714:-1:exon
so has part: feature:1259150-1259369:-1:exon
so has part: feature:1257479-1257612:-1:exon
so has part: feature:1257017-1257133:-1:exon
so has part: feature:1256043-1256252:-1:exon
so has part: feature:1252815-1254167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1295206-1295470:-1:exon

position:1295206:-1
position: 1295206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1291590-1291728:-1:exon

position:1291590:-1
position: 1291590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291728:-1
position: 1291728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1290426-1290600:-1:exon

position:1290426:-1
position: 1290426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290600:-1
position: 1290600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1286102-1286599:-1:exon

position:1286102:-1
position: 1286102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286599:-1
position: 1286599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1284850-1284948:-1:exon

position:1284850:-1
position: 1284850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284948:-1
position: 1284948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1279388-1279519:-1:exon

position:1279388:-1
position: 1279388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279519:-1
position: 1279519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1275547-1275941:-1:exon

position:1275547:-1
position: 1275547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275941:-1
position: 1275941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1274241-1274416:-1:exon

position:1274241:-1
position: 1274241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274416:-1
position: 1274416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1274034-1274131:-1:exon

position:1274034:-1
position: 1274034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274131:-1
position: 1274131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1271077-1271175:-1:exon

position:1271077:-1
position: 1271077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271175:-1
position: 1271175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1269618-1269767:-1:exon

position:1269618:-1
position: 1269618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1269767:-1
position: 1269767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1265945-1266246:-1:exon

position:1265945:-1
position: 1265945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1266246:-1
position: 1266246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1264897-1265024:-1:exon

position:1264897:-1
position: 1264897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265024:-1
position: 1265024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1262612-1262743:-1:exon

position:1262612:-1
position: 1262612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262743:-1
position: 1262743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1261530-1261714:-1:exon

position:1261530:-1
position: 1261530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261714:-1
position: 1261714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1259150-1259369:-1:exon

position:1259150:-1
position: 1259150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259369:-1
position: 1259369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1257479-1257612:-1:exon

position:1257479:-1
position: 1257479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257612:-1
position: 1257612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1257017-1257133:-1:exon

position:1257017:-1
position: 1257017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257133:-1
position: 1257133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1256043-1256252:-1:exon

position:1256043:-1
position: 1256043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256252:-1
position: 1256252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1252815-1254167:-1:exon

position:1254167:-1
position: 1254167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hmgxb3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hmgxb3
product: HMG-box containing 3, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331092.1
SIO_010081: Hmgxb3
subclass of: SO_0000673
so part of: Hmgxb3
location: complement(join(1252815..1254167,1256043..1256252,1257017..1257133,1257479..1257612,1259150..1259369,1261530..1261714,1262612..1262743,1264897..1265024,1265945..1266246,1269618..1269767,1271077..1271175,1274034..1274131,1274241..1274416,1275547..1275941,1279388..1279519,1295206..1295462))
location: region:1252815-1295462:-1
so has part: feature:1295206-1295462:-1:exon
so has part: feature:1279388-1279519:-1:exon
so has part: feature:1275547-1275941:-1:exon
so has part: feature:1274241-1274416:-1:exon
so has part: feature:1274034-1274131:-1:exon
so has part: feature:1271077-1271175:-1:exon
so has part: feature:1269618-1269767:-1:exon
so has part: feature:1265945-1266246:-1:exon
so has part: feature:1264897-1265024:-1:exon
so has part: feature:1262612-1262743:-1:exon
so has part: feature:1261530-1261714:-1:exon
so has part: feature:1259150-1259369:-1:exon
so has part: feature:1257479-1257612:-1:exon
so has part: feature:1257017-1257133:-1:exon
so has part: feature:1256043-1256252:-1:exon
so has part: feature:1252815-1254167:-1:exon

position:1295462:-1
position: 1295462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295206-1295462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1279388-1279519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1275547-1275941:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1274241-1274416:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1274034-1274131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1271077-1271175:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269618-1269767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1265945-1266246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1264897-1265024:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1262612-1262743:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1261530-1261714:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1259150-1259369:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1257479-1257612:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1257017-1257133:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1256043-1256252:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1252815-1254167:-1:exon

Hmgxb3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hmgxb3
product: HMG-box containing 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331090.1
SIO_010081: Hmgxb3
subclass of: SO_0000673
so part of: Hmgxb3
location: complement(join(1252815..1254167,1256043..1256252,1257017..1257133,1257479..1257612,1259150..1259369,1261530..1261714,1264897..1265024,1265945..1266246,1269618..1269767,1271077..1271175,1274034..1274131,1274241..1274416,1275547..1275941,1279388..1279519,1284850..1284948,1286102..1286599,1290426..1290600,1291590..1292120))
location: region:1252815-1292120:-1
so has part: feature:1291590-1292120:-1:exon
so has part: feature:1290426-1290600:-1:exon
so has part: feature:1286102-1286599:-1:exon
so has part: feature:1284850-1284948:-1:exon
so has part: feature:1279388-1279519:-1:exon
so has part: feature:1275547-1275941:-1:exon
so has part: feature:1274241-1274416:-1:exon
so has part: feature:1274034-1274131:-1:exon
so has part: feature:1271077-1271175:-1:exon
so has part: feature:1269618-1269767:-1:exon
so has part: feature:1265945-1266246:-1:exon
so has part: feature:1264897-1265024:-1:exon
so has part: feature:1261530-1261714:-1:exon
so has part: feature:1259150-1259369:-1:exon
so has part: feature:1257479-1257612:-1:exon
so has part: feature:1257017-1257133:-1:exon
so has part: feature:1256043-1256252:-1:exon
so has part: feature:1252815-1254167:-1:exon

position:1292120:-1
position: 1292120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291590-1292120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1290426-1290600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286102-1286599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284850-1284948:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1279388-1279519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275547-1275941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1274241-1274416:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1274034-1274131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1271077-1271175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1269618-1269767:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265945-1266246:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1264897-1265024:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1261530-1261714:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1259150-1259369:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1257479-1257612:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1257017-1257133:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1256043-1256252:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1252815-1254167:-1:exon

Hmgxb3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Hmgxb3
product: HMG-box containing 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331089.1
SIO_010081: Hmgxb3
subclass of: SO_0000673
so part of: Hmgxb3
location: complement(join(1252815..1254167,1256043..1256252,1257017..1257133,1257479..1257612,1259150..1259369,1261530..1261714,1262612..1262743,1264897..1265024,1265945..1266246,1269618..1269767,1271077..1271175,1274034..1274131,1274241..1274416,1275547..1275722,1275819..1275941,1279388..1279519,1284850..1284948,1286102..1286599,1290426..1290600,1291590..1292119))
location: region:1252815-1292119:-1
so has part: feature:1291590-1292119:-1:exon
so has part: feature:1290426-1290600:-1:exon
so has part: feature:1286102-1286599:-1:exon
so has part: feature:1284850-1284948:-1:exon
so has part: feature:1279388-1279519:-1:exon
so has part: feature:1275819-1275941:-1:exon
so has part: feature:1275547-1275722:-1:exon
so has part: feature:1274241-1274416:-1:exon
so has part: feature:1274034-1274131:-1:exon
so has part: feature:1271077-1271175:-1:exon
so has part: feature:1269618-1269767:-1:exon
so has part: feature:1265945-1266246:-1:exon
so has part: feature:1264897-1265024:-1:exon
so has part: feature:1262612-1262743:-1:exon
so has part: feature:1261530-1261714:-1:exon
so has part: feature:1259150-1259369:-1:exon
so has part: feature:1257479-1257612:-1:exon
so has part: feature:1257017-1257133:-1:exon
so has part: feature:1256043-1256252:-1:exon
so has part: feature:1252815-1254167:-1:exon

position:1292119:-1
position: 1292119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291590-1292119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1290426-1290600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286102-1286599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284850-1284948:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1279388-1279519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275819-1275941:-1:exon

position:1275819:-1
position: 1275819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1275547-1275722:-1:exon

position:1275722:-1
position: 1275722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1274241-1274416:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1274034-1274131:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1271077-1271175:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1269618-1269767:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1265945-1266246:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1264897-1265024:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1262612-1262743:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1261530-1261714:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1259150-1259369:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1257479-1257612:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1257017-1257133:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1256043-1256252:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1252815-1254167:-1:exon

Hmgxb3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hmgxb3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HMG domain-containing protein 3 isoform X4
translation: MRARALASSSSSPRSRPEPPRAGSGERERAGQPPRRRAPGPGASGHVSRAPRALPRTTTYTRRGHGACTSPGCSFTYVTRHKPPKCPTCGNFLGGKWIPKEKPAKVKVESSSDVSSNSSVTSEQNFCNENDSKLTLENSEAVSQLLNVVPPREVGEENEWKEVIVSNAHVLVKGGPGTRGTAVTKTPVVKSVVKTEFTLETTENDSPRPYVPQAAEGSSTSSPVPVFKKPTGVDLLSTGSRATELKGRARGKPSLLAAARPMRAILPAPASVGRGSSLGLPRARQTFPLSDKTSSMRTCGLKPSTLKQLGQPIQQPSSIGEVKLPSGPNNRTPQVKVVEVKPDIFPPYKYSCTVTLDLGLATSRGRGKCKNPSCSYVYTNRHKPRICPSCGFNLAKDRTEKSTKALEASSPLSDVPSATEPLSTAQREIQRQSTLQLLRKVLQIPENESELTEVFALIHELNSSRLILSNVSEETVTIEQTSWSNYYEFPSTQCLLCSSPLLKGGKNSLAGPQECWLLTASRLQVVTAQVKMCLNPHCLALHSFMDIYTGLFNVGNKLLVSLDLLFAIRNQIKLGEDPRVFANIVLKSVQEQTEKTLPSEELGQLQELLCNGYWAFECLTVRDYNDMICGICGVAPKVEMAQRNEENVLALKSVEFTWPEFLASSEVNVEDFWATMETEVIEQVAFPASIPITKFDASVIAPFFPPLMRGAVVVNTEKDKNLDVQPAPGNGSALVRLLQEGTCKLEELGAYDEHELQNLLKECGVPYRAEDSRDQLCLSLLALYESVQNGARARQPPPHLTGGKIYKMCPHQVVCGSKYLVRGESARDHVDLLASSRHWPPVYVVDTATPVALCADLCYPELTSQMWGRNQGCFSSPAEPPVSVSCPELLDQHFSVDVMEAEHSIQHPVTKTTTRRIVHAGTQPSPSDPSAEHHSLSLCPELAPYTSILTSSADSKPNGVRQRPIAFDNATHYYLYNRLLDFLTSREIVNRQIQDIVQSCQPGEVVIRDALYRLGVAQIKTEMEEEGGEEDVAPAAK
SIO_010081: Hmgxb3
subclass of: SO_0000673
so part of: Hmgxb3
location: complement(join(1253700..1254167,1256043..1256252,1257017..1257133,1257479..1257612,1259150..1259369,1261530..1261714,1262612..1262743,1264897..1265024,1265945..1266246,1269618..1269767,1271077..1271175,1274034..1274131,1274241..1274416,1275547..1275941,1279388..1279519,1295206..1295373))
location: region:1253700-1295373:-1
so has part: feature:1295206-1295373:-1:exon
so has part: feature:1279388-1279519:-1:exon
so has part: feature:1275547-1275941:-1:exon
so has part: feature:1274241-1274416:-1:exon
so has part: feature:1274034-1274131:-1:exon
so has part: feature:1271077-1271175:-1:exon
so has part: feature:1269618-1269767:-1:exon
so has part: feature:1265945-1266246:-1:exon
so has part: feature:1264897-1265024:-1:exon
so has part: feature:1262612-1262743:-1:exon
so has part: feature:1261530-1261714:-1:exon
so has part: feature:1259150-1259369:-1:exon
so has part: feature:1257479-1257612:-1:exon
so has part: feature:1257017-1257133:-1:exon
so has part: feature:1256043-1256252:-1:exon
so has part: feature:1253700-1254167:-1:exon

XP_048187049.1
type: Protein
SIO_000068: ncbiprotein

position:1253700:-1
position: 1253700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295373:-1
position: 1295373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295206-1295373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1279388-1279519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1275547-1275941:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1274241-1274416:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1274034-1274131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1271077-1271175:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269618-1269767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1265945-1266246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1264897-1265024:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1262612-1262743:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1261530-1261714:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1259150-1259369:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1257479-1257612:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1257017-1257133:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1256043-1256252:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1253700-1254167:-1:exon

Hmgxb3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hmgxb3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HMG domain-containing protein 3 isoform X1
translation: MDASYDGTEVTVLMEEIEEAYCYTSPGPPKKKKKYKIHGEKAKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKAKLEKEGLDPNSKLSALTAVVPDIPGFRKILPRSDYIIIPKSSLQEDRSCPQIELCMAQNQLSPKGLPLVSSTVPEAVSSHASVAEPCLAGEALSEEVGALAQPGSVQEIATPEILSPDMLLEEASLEVGESHQPYQTSLVIEEALLNGSPDFSPGSLAMPHPQLGEGVSVVTVMRDSSEGSSSAPAAQFIMVPLPAYSVVENPTSIKLTTTYTRRGHGACTSPGCSFTYVTRHKPPKCPTCGNFLGGKWIPKEKPAKVKVESSSDVSSNSSVTSEQNFCNENDSKLTLENSEAGGPGTRGTAVTKTPVVKSVVKTEFTLETTENDSPRPYVPQAAEGSSTSSPVPVFKKPTGVDLLSTGSRATELKGRARGKPSLLAAARPMRAILPAPASVGRGSSLGLPRARQTFPLSDKTSSMRTCGLKPSTLKQLGQPIQQPSSIGEVKLPSGPNNRTPQVKVVEVKPDIFPPYKYSCTVTLDLGLATSRGRGKCKNPSCSYVYTNRHKPRICPSCGFNLAKDRTEKSTKALEASSPLSDVPSATEPLSTAQREIQRQSTLQLLRKVLQIPENESELTEVFALIHELNSSRLILSNVSEETVTIEQTSWSNYYEFPSTQCLLCSSPLLKGGKNSLAGPQECWLLTASRLQVVTAQVKMCLNPHCLALHSFMDIYTGLFNVGNKLLVSLDLLFAIRNQIKLGEDPRVFANIVLKSVQEQTEKTLPSEELGQLQELLCNGYWAFECLTVRDYNDMICGICGVAPKVEMAQRNEENVLALKSVEFTWPEFLASSEVNVEDFWATMETEVIEQVAFPASIPITKFDASVIAPFFPPLMRGAVVVNTEKDKNLDVQPAPGNGSALVRLLQEGTCKLEELGAYDEHELQNLLKECGVPYRAEDSRDQLCLSLLALYESVQNGARARQPPPHLTGGKIYKMCPHQVVCGSKYLVRGESARDHVDLLASSRHWPPVYVVDTATPVALCADLCYPELTSQMWGRNQGCFSSPAEPPVSVSCPELLDQHFSVDVMEAEHSIQHPVTKTTTRRIVHAGTQPSPSDPSAEHHSLSLCPELAPYTSILTSSADSKPNGVRQRPIAFDNATHYYLYNRLLDFLTSREIVNRQIQDIVQSCQPGEVVIRDALYRLGVAQIKTEMEEEGGEEDVAPAAK
SIO_010081: Hmgxb3
subclass of: SO_0000673
so part of: Hmgxb3
location: complement(join(1253700..1254167,1256043..1256252,1257017..1257133,1257479..1257612,1259150..1259369,1261530..1261714,1262612..1262743,1264897..1265024,1265945..1266246,1269618..1269767,1271077..1271175,1274034..1274131,1274241..1274416,1275547..1275722,1275819..1275941,1279388..1279519,1284850..1284948,1286102..1286599,1290426..1290600,1291590..1291726))
location: region:1253700-1291726:-1
so has part: feature:1291590-1291726:-1:exon
so has part: feature:1290426-1290600:-1:exon
so has part: feature:1286102-1286599:-1:exon
so has part: feature:1284850-1284948:-1:exon
so has part: feature:1279388-1279519:-1:exon
so has part: feature:1275819-1275941:-1:exon
so has part: feature:1275547-1275722:-1:exon
so has part: feature:1274241-1274416:-1:exon
so has part: feature:1274034-1274131:-1:exon
so has part: feature:1271077-1271175:-1:exon
so has part: feature:1269618-1269767:-1:exon
so has part: feature:1265945-1266246:-1:exon
so has part: feature:1264897-1265024:-1:exon
so has part: feature:1262612-1262743:-1:exon
so has part: feature:1261530-1261714:-1:exon
so has part: feature:1259150-1259369:-1:exon
so has part: feature:1257479-1257612:-1:exon
so has part: feature:1257017-1257133:-1:exon
so has part: feature:1256043-1256252:-1:exon
so has part: feature:1253700-1254167:-1:exon

XP_048187046.1
type: Protein
SIO_000068: ncbiprotein

position:1291726:-1
position: 1291726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291590-1291726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1290426-1290600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286102-1286599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284850-1284948:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1279388-1279519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275819-1275941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1275547-1275722:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1274241-1274416:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1274034-1274131:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1271077-1271175:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1269618-1269767:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1265945-1266246:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1264897-1265024:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1262612-1262743:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1261530-1261714:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1259150-1259369:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1257479-1257612:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1257017-1257133:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1256043-1256252:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1253700-1254167:-1:exon

Hmgxb3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hmgxb3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HMG domain-containing protein 3 isoform X2
translation: MDASYDGTEVTVLMEEIEEAYCYTSPGPPKKKKKYKIHGEKAKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKAKLEKEGLDPNSKLSALTAVVPDIPGFRKILPRSDYIIIPKSSLQEDRSCPQIELCMAQNQLSPKGLPLVSSTVPEAVSSHASVAEPCLAGEALSEEVGALAQPGSVQEIATPEILSPDMLLEEASLEVGESHQPYQTSLVIEEALLNGSPDFSPGSLAMPHPQLGEGVSVVTVMRDSSEGSSSAPAAQFIMVPLPAYSVVENPTSIKLTTTYTRRGHGACTSPGCSFTYVTRHKPPKCPTCGNFLGGKWIPKEKPAKVKVESSSDVSSNSSVTSEQNFCNENDSKLTLENSEAVSQLLNVVPPREVGEENEWKEVIVSNAHVLVKGGPGTRGTAVTKTPVVKSVVKTEFTLETTENDSPRPYVPQAAEGSSTSSPVPVFKKPTGVDLLSTGSRATELKGRARGKPSLLAAARPMRAILPAPASVGRGSSLGLPRARQTFPLSDKTSSMRTCGLKPSTLKQLGQPIQQPSSIGEVKLPSGPNNRTPQVKVVEVKPDIFPPYKYSCTVTLDLGLATSRGRGKCKNPSCSYVYTNRHKPRICPSCGFNLAKDRTEKSTKALEASSPLSDVPSATEPLSTAQREIQRQSTLQLLRKVLQIPENESELTEVFALIHELNSSRLILSNVSEETVTIEQTSWSNYYEFPSTQCLLCSSPLLKGGKNSLAGPQECWLLTASRLQVVTAQVKMCLNPHCLALHSFMDIYTEKTLPSEELGQLQELLCNGYWAFECLTVRDYNDMICGICGVAPKVEMAQRNEENVLALKSVEFTWPEFLASSEVNVEDFWATMETEVIEQVAFPASIPITKFDASVIAPFFPPLMRGAVVVNTEKDKNLDVQPAPGNGSALVRLLQEGTCKLEELGAYDEHELQNLLKECGVPYRAEDSRDQLCLSLLALYESVQNGARARQPPPHLTGGKIYKMCPHQVVCGSKYLVRGESARDHVDLLASSRHWPPVYVVDTATPVALCADLCYPELTSQMWGRNQGCFSSPAEPPVSVSCPELLDQHFSVDVMEAEHSIQHPVTKTTTRRIVHAGTQPSPSDPSAEHHSLSLCPELAPYTSILTSSADSKPNGVRQRPIAFDNATHYYLYNRLLDFLTSREIVNRQIQDIVQSCQPGEVVIRDALYRLGVAQIKTEMEEEGGEEDVAPAAK
SIO_010081: Hmgxb3
subclass of: SO_0000673
so part of: Hmgxb3
location: complement(join(1253700..1254167,1256043..1256252,1257017..1257133,1257479..1257612,1259150..1259369,1261530..1261714,1264897..1265024,1265945..1266246,1269618..1269767,1271077..1271175,1274034..1274131,1274241..1274416,1275547..1275941,1279388..1279519,1284850..1284948,1286102..1286599,1290426..1290600,1291590..1291726))
location: region:1253700-1291726:-1
so has part: feature:1291590-1291726:-1:exon
so has part: feature:1290426-1290600:-1:exon
so has part: feature:1286102-1286599:-1:exon
so has part: feature:1284850-1284948:-1:exon
so has part: feature:1279388-1279519:-1:exon
so has part: feature:1275547-1275941:-1:exon
so has part: feature:1274241-1274416:-1:exon
so has part: feature:1274034-1274131:-1:exon
so has part: feature:1271077-1271175:-1:exon
so has part: feature:1269618-1269767:-1:exon
so has part: feature:1265945-1266246:-1:exon
so has part: feature:1264897-1265024:-1:exon
so has part: feature:1261530-1261714:-1:exon
so has part: feature:1259150-1259369:-1:exon
so has part: feature:1257479-1257612:-1:exon
so has part: feature:1257017-1257133:-1:exon
so has part: feature:1256043-1256252:-1:exon
so has part: feature:1253700-1254167:-1:exon

XP_048187047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1291590-1291726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1290426-1290600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286102-1286599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284850-1284948:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1279388-1279519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275547-1275941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1274241-1274416:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1274034-1274131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1271077-1271175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1269618-1269767:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265945-1266246:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1264897-1265024:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1261530-1261714:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1259150-1259369:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1257479-1257612:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1257017-1257133:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1256043-1256252:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1253700-1254167:-1:exon

Hmgxb3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Hmgxb3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HMG domain-containing protein 3 isoform X3
translation: MDASYDGTEVTVLMEEIEEAYCYTSPGPPKKKKKYKIHGEKAKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKAKLEKEGLDPNSKLSALTAVVPDIPGFRKILPRSDYIIIPKSSLQEDRSCPQIELCMAQNQLSPKGLPLVSSTVPEAVSSHASVAEPCLAGEALSEEVGALAQPGSVQEIATPEILSPDMLLEEASLEVGESHQPYQTSLVIEEALLNGSPDFSPGSLAMPHPQLGEGVSVVTVMRDSSEGSSSAPAAQFIMVPLPAYSVVENPTSIKLTTTYTRRGHGACTSPGCSFTYVTRHKPPKCPTCGNFLGGKWIPKEKPAKVKVESSSDVSSNSSVTSEQNFCNENDSKLTLENSEAVSQLLNVVPPREVGEENEWKEVIVSNAHVLVKGGPGTRGTAVTKTPVVKSVVKTEFTLETTENDSPRPYVPQAAEGSSTSSPVPVFKKPTGVDLLSTGSRATELKGRARGKPSLLAAARPMRAILPAPASVGRGSSLGLPRARQTFPLSDKTSSMRTCGLKPSTLKQLGQPIQQPSSIGEVKLPSGPNNRTPQVKVVEVKPDIFPPYKYSCTVTLDLGLATSRGRGKCKNPSCSYVYTNRHKPRICPSCGFNLAKDRTEKSTKALEASSPLSDVPSATEPLSTAQREIQRQSTLQLLRKVLQIPENESELTEVFALIHELNSSRLILSNVSEETVTIEQTSWSNYYEFPSTQCLLCSSPLLKGGKNSLAGPQECWLLTASRLQVVTAQVKMCLNPHCLALHSFMDIYTGLFNVGNKLLVSLDLLFAIRNQIKLGEDPRVFANIVLKSVQEQTEKTLPSEELGQLQELLCNGYWAFECLTVRDYNDMICGICGVAPKVEMAQRNEENVLALKSVEFTWPEFLASSEVNVEDFWATMETEVIEQVAFPASIPITKFDASVIAPFFPPLMRGAVVVNTEKDKNLDVQPAPGNGSALVRLLQEGTCKLEELGAYDEHELQNLLKECGVPYRAEDSRDQLCLSLLALYESVQNGARARQPPPHLTGGKIYKMCPHQVVCGSKYLVRGESARDHVDLLASSRHWPPVYVVDTATPVALCADLCYPELTSQMWGRNQGCFSSPAEPPVSVSCPELLDQHFSVDVMEAEHSIQHPVTKTTTRRIVHAGTQPSPSDPSAEHHSLSLCPELAPYTSILTSSADSKPNGVRQRPIAFDNATHYYLYNRLLDFLTSREIVNRQIQDIVQSCQPGEVVIRDALYRLGVAQIKTEMEEEGGEEDVAPAAK
SIO_010081: Hmgxb3
subclass of: SO_0000673
so part of: Hmgxb3
location: complement(join(1253700..1254167,1256043..1256252,1257017..1257133,1257479..1257612,1259150..1259369,1261530..1261714,1262612..1262743,1264897..1265024,1265945..1266246,1269618..1269767,1271077..1271175,1274034..1274131,1274241..1274416,1275547..1275941,1279388..1279519,1284850..1284948,1286102..1286599,1290426..1290600,1291590..1291726))
location: region:1253700-1291726:-1
so has part: feature:1291590-1291726:-1:exon
so has part: feature:1290426-1290600:-1:exon
so has part: feature:1286102-1286599:-1:exon
so has part: feature:1284850-1284948:-1:exon
so has part: feature:1279388-1279519:-1:exon
so has part: feature:1275547-1275941:-1:exon
so has part: feature:1274241-1274416:-1:exon
so has part: feature:1274034-1274131:-1:exon
so has part: feature:1271077-1271175:-1:exon
so has part: feature:1269618-1269767:-1:exon
so has part: feature:1265945-1266246:-1:exon
so has part: feature:1264897-1265024:-1:exon
so has part: feature:1262612-1262743:-1:exon
so has part: feature:1261530-1261714:-1:exon
so has part: feature:1259150-1259369:-1:exon
so has part: feature:1257479-1257612:-1:exon
so has part: feature:1257017-1257133:-1:exon
so has part: feature:1256043-1256252:-1:exon
so has part: feature:1253700-1254167:-1:exon

XP_048187048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1291590-1291726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1290426-1290600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286102-1286599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284850-1284948:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1279388-1279519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275547-1275941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1274241-1274416:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1274034-1274131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1271077-1271175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1269618-1269767:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265945-1266246:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1264897-1265024:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1262612-1262743:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1261530-1261714:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1259150-1259369:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1257479-1257612:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1257017-1257133:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1256043-1256252:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1253700-1254167:-1:exon

LOC125339821
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125339821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1266747..1289153
location: region:1266747-1289153:1
so has part: feature:1266747-1289153:1:exon
subclass of: SO_0000011

125339821
type: Gene
SIO_000068: ncbigene

position:1266747:1
position: 1266747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289153:1
position: 1289153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1266747-1289153:1:exon

LOC125339821
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125339821
product: uncharacterized LOC125339821
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007208631.1
SIO_010081: LOC125339821
subclass of: SO_0000673
so part of: LOC125339821
location: join(1266747..1266874,1278419..1278424,1289141..1289153)
location: region:1266747-1289153:1
so has part: feature:1266747-1266874:1:exon
so has part: feature:1278419-1278424:1:exon
so has part: feature:1289141-1289153:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1266747-1266874:1:exon

position:1266874:1
position: 1266874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1278419-1278424:1:exon

position:1278419:1
position: 1278419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1278424:1
position: 1278424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1289141-1289153:1:exon

position:1289141:1
position: 1289141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slc26a2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Slc26a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1309122..1316972)
location: region:1309122-1316972:-1
so has part: feature:1309122-1316972:-1:exon
subclass of: SO_0000010

125339923
type: Gene
SIO_000068: ncbigene

position:1309122:-1
position: 1309122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1316972:-1
position: 1316972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1309122-1316972:-1:exon

Slc26a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slc26a2
product: solute carrier family 26 member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048331297.1
SIO_010081: Slc26a2
subclass of: SO_0000673
so part of: Slc26a2
location: complement(join(1309122..1312207,1314185..1314905,1316665..1316972))
location: region:1309122-1316972:-1
so has part: feature:1316665-1316972:-1:exon
so has part: feature:1314185-1314905:-1:exon
so has part: feature:1309122-1312207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1316665-1316972:-1:exon

position:1316665:-1
position: 1316665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1314185-1314905:-1:exon

position:1314185:-1
position: 1314185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314905:-1
position: 1314905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1309122-1312207:-1:exon

position:1312207:-1
position: 1312207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc26a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slc26a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfate transporter
translation: MSSESEEQHDLSLRASDEGKDSFSSGVPLEIQQESSTNFKLHETNDQCRPYRQIHMEPQERTNTSTKQLIIKKLHKSCQCSPSKAKNRIYDFLPVLRWLPKYDLKKNILGDVMSGLIVGILLVPQSIAYSLLAGQEPIFGLYTSFFASIIYFLFGTSRHISVGIFGVLCLMIGEVVDRELHKAGYGAAGIAPFGVISNESTLISNMSDGICSKSCYAIKIGSTVTFLAGVYQVAMGFFQVGFISVYLSDALLSGFVTGASFTILTSQAKYLLGLSLPRSNGVGSLITTWIHIFKNIHKTNLCDLITSLLCLLVLLPTKELNEHFKSKLKAPIPTELIVVVAATLASHFGKLNENYNSSISGHIPTGFMPPKAPDWDLIPNVAVDAIAISIIGFAITVSLSEMFAKKHGYTVKANQEMYAIGFCNIIPSFFHCITTSAALAKTLVKESTGCQTQLSAVVTALVLLLVLLVIAPLFFSLQKCVLGVITIVNLRGALRKFRDLPKMWRVSRMDTVIWFVTMLCSALISTEIGLLIGVCFSMFCVILRTQKPKISLLGWVEESEIFECMTDYKNLQTKPGIKVFRFIAPLYYINKEAFKSALYKKTLNPVLVKASQKKAAKRKLREETVTLSGLQDEVSVQLSHEPMELHTIVIDCSAMQFLDTAGIQTLKEVRRDYEAIGIQVLLAQCNPSVRDSLVRGEYCKEDEENLLFYSVYTAVGFAVDSQAQKGVCVLNGVSPVTD
SIO_010081: Slc26a2
subclass of: SO_0000673
so part of: Slc26a2
location: complement(join(1310687..1312207,1314185..1314880))
location: region:1310687-1314880:-1
so has part: feature:1314185-1314880:-1:exon
so has part: feature:1310687-1312207:-1:exon

XP_048187254.1
type: Protein
SIO_000068: ncbiprotein

position:1310687:-1
position: 1310687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314880:-1
position: 1314880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1314185-1314880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1310687-1312207:-1:exon

Pde6a
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Pde6a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1332295..1386238
location: region:1332295-1386238:1
so has part: feature:1332295-1386238:1:exon
subclass of: SO_0000010

125339834
type: Gene
SIO_000068: ncbigene

position:1332295:1
position: 1332295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386238:1
position: 1386238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1332295-1386238:1:exon

Pde6a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pde6a
product: phosphodiesterase 6A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331117.1
SIO_010081: Pde6a
subclass of: SO_0000673
so part of: Pde6a
location: join(1332295..1332768,1341901..1342053,1343110..1343199,1343949..1344089,1351209..1351283,1359314..1359378,1367215..1367281,1367920..1367967,1368993..1369142,1369467..1369610,1370805..1370870,1371026..1371172,1371692..1371799,1376413..1376523,1377794..1377880,1378014..1378113,1378458..1378565,1382992..1383056,1383280..1383354,1384371..1384454,1385600..1385747,1386168..1386238)
location: region:1332295-1386238:1
so has part: feature:1332295-1332768:1:exon
so has part: feature:1341901-1342053:1:exon
so has part: feature:1343110-1343199:1:exon
so has part: feature:1343949-1344089:1:exon
so has part: feature:1351209-1351283:1:exon
so has part: feature:1359314-1359378:1:exon
so has part: feature:1367215-1367281:1:exon
so has part: feature:1367920-1367967:1:exon
so has part: feature:1368993-1369142:1:exon
so has part: feature:1369467-1369610:1:exon
so has part: feature:1370805-1370870:1:exon
so has part: feature:1371026-1371172:1:exon
so has part: feature:1371692-1371799:1:exon
so has part: feature:1376413-1376523:1:exon
so has part: feature:1377794-1377880:1:exon
so has part: feature:1378014-1378113:1:exon
so has part: feature:1378458-1378565:1:exon
so has part: feature:1382992-1383056:1:exon
so has part: feature:1383280-1383354:1:exon
so has part: feature:1384371-1384454:1:exon
so has part: feature:1385600-1385747:1:exon
so has part: feature:1386168-1386238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1332295-1332768:1:exon

position:1332768:1
position: 1332768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1341901-1342053:1:exon

position:1341901:1
position: 1341901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1342053:1
position: 1342053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1343110-1343199:1:exon

position:1343110:1
position: 1343110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343199:1
position: 1343199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1343949-1344089:1:exon

position:1343949:1
position: 1343949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1344089:1
position: 1344089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1351209-1351283:1:exon

position:1351209:1
position: 1351209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1351283:1
position: 1351283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1359314-1359378:1:exon

position:1359314:1
position: 1359314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359378:1
position: 1359378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1367215-1367281:1:exon

position:1367215:1
position: 1367215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1367281:1
position: 1367281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1367920-1367967:1:exon

position:1367920:1
position: 1367920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1367967:1
position: 1367967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1368993-1369142:1:exon

position:1368993:1
position: 1368993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1369142:1
position: 1369142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1369467-1369610:1:exon

position:1369467:1
position: 1369467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1369610:1
position: 1369610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1370805-1370870:1:exon

position:1370805:1
position: 1370805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1370870:1
position: 1370870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1371026-1371172:1:exon

position:1371026:1
position: 1371026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1371172:1
position: 1371172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1371692-1371799:1:exon

position:1371692:1
position: 1371692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1371799:1
position: 1371799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1376413-1376523:1:exon

position:1376413:1
position: 1376413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376523:1
position: 1376523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1377794-1377880:1:exon

position:1377794:1
position: 1377794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1377880:1
position: 1377880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1378014-1378113:1:exon

position:1378014:1
position: 1378014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378113:1
position: 1378113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1378458-1378565:1:exon

position:1378458:1
position: 1378458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378565:1
position: 1378565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1382992-1383056:1:exon

position:1382992:1
position: 1382992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383056:1
position: 1383056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1383280-1383354:1:exon

position:1383280:1
position: 1383280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383354:1
position: 1383354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1384371-1384454:1:exon

position:1384371:1
position: 1384371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384454:1
position: 1384454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1385600-1385747:1:exon

position:1385600:1
position: 1385600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385747:1
position: 1385747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1386168-1386238:1:exon

position:1386168:1
position: 1386168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pde6a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pde6a
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha
translation: MGEVTAEEVEKFLDAHIGFAKRYYDRRYRARVLSELLGAREAAVDLSRYRALSSVEESEVLFDLLRDFRENLQAERSAFNVLRRLAFLLRAERVSLFLHRARNGTAELATRLFDVHKDAALDDCLVPPDAEIVFPLDLGVVGHVAHSKKLVNVPRADQDEHFCDFVDNLTEYQTRNILASPIMNGKDVVAVIMAVNKVDAPHFTKADEEILLKYLNFLNLIMKVFHLSYLHNCETRRGQILLWSGSKVFEELTDIERQFHKALYTVRAFLNCDRYSVGLLDMTKQKEFFDVWPVLMGEAPPYSGPRTPDGREINFYKVIDYILHGKEDIKVIPNPPPDHWALVSGLPSYVAQNGLICNIMNAPAEDFFEFQKEPLDESGWMIKNVLSMPIVNKKEEIVGVATFFNRKDGKPFDEMDETLMESLTQFLGWSVLNPDTYESMNKLENRKDIFQDIVKYHVKCDNEEIQKILKTREVYGKEPWDCEEEELAEILQEELPDAEKYEINKFHFSDLPLTELELVKCGIQMYYELRVVDKFHIPQEALVRFMYSLSKGYRRITYHNWRHGFNVGQTMFSLLVTGKLKRYFTDLEALAMVTASFCHDIDHRGTNNLYQMKSQNPLAKLHGSSILERHHXEFGKTLLRDESLNIFXNLNRRQHEHAIHMMDIAIIATDLALYFKKRTMFQKIVDQSKTYESEQEWTQYMMLEQTRKEIVMAMMLTACDLSAITKPWEVQSKVALLVAAEFWEQGDLERTVLQQNPIPMMDRNKADELPKLQVGFIDFVCTFVYKEFSRFHEEITPMLDGITNNRKEWKALADEYEAKVKALEEEKQKQQGAKPAGEQPAGNPAPGAAPASKSCCVQ
SIO_010081: Pde6a
subclass of: SO_0000673
so part of: Pde6a
location: join(1332295..1332768,1341901..1342053,1343110..1343199,1343949..1344089,1351209..1351283,1359314..1359378,1367215..1367281,1367920..1367967,1368993..1369142,1369467..1369610,1370805..1370870,1371026..1371172,1371692..1371799,1376413..1376523,1377794..1377880,1378014..1378113,1378458..1378565,1382992..1383056,1383280..1383354,1384371..1384454,1385600..1385747,1386168..1386238)
location: region:1332295-1386238:1
so has part: feature:1332295-1332768:1:exon
so has part: feature:1341901-1342053:1:exon
so has part: feature:1343110-1343199:1:exon
so has part: feature:1343949-1344089:1:exon
so has part: feature:1351209-1351283:1:exon
so has part: feature:1359314-1359378:1:exon
so has part: feature:1367215-1367281:1:exon
so has part: feature:1367920-1367967:1:exon
so has part: feature:1368993-1369142:1:exon
so has part: feature:1369467-1369610:1:exon
so has part: feature:1370805-1370870:1:exon
so has part: feature:1371026-1371172:1:exon
so has part: feature:1371692-1371799:1:exon
so has part: feature:1376413-1376523:1:exon
so has part: feature:1377794-1377880:1:exon
so has part: feature:1378014-1378113:1:exon
so has part: feature:1378458-1378565:1:exon
so has part: feature:1382992-1383056:1:exon
so has part: feature:1383280-1383354:1:exon
so has part: feature:1384371-1384454:1:exon
so has part: feature:1385600-1385747:1:exon
so has part: feature:1386168-1386238:1:exon

XP_048187074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1332295-1332768:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1341901-1342053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1343110-1343199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1343949-1344089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1351209-1351283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1359314-1359378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1367215-1367281:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1367920-1367967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1368993-1369142:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1369467-1369610:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1370805-1370870:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1371026-1371172:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1371692-1371799:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1376413-1376523:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1377794-1377880:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1378014-1378113:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1378458-1378565:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1382992-1383056:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1383280-1383354:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1384371-1384454:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1385600-1385747:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1386168-1386238:1:exon

Ppargc1b
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ppargc1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1395937..1486884)
location: region:1395937-1486884:-1
so has part: feature:1395937-1486884:-1:exon
subclass of: SO_0000010

125339833
type: Gene
SIO_000068: ncbigene

position:1395937:-1
position: 1395937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1486884:-1
position: 1486884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1395937-1486884:-1:exon

Ppargc1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ppargc1b
product: PPARG coactivator 1 beta
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 8 bases in 7 codons; deleted 5 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331115.1
SIO_010081: Ppargc1b
subclass of: SO_0000673
so part of: Ppargc1b
location: complement(join(1395937..1396271,1396642..1396797,1398177..1398298,1399011..1399073,1402589..1403246,1403366..1403427,1404202..1404238,1404880..1405922,1406661..1406675,1407012..1407128,1410657..1410869,1416716..1416877,1472289..1472296,1476844..1476847,1486757..1486884))
location: region:1395937-1486884:-1
so has part: feature:1486757-1486884:-1:exon
so has part: feature:1476844-1476847:-1:exon
so has part: feature:1472289-1472296:-1:exon
so has part: feature:1416716-1416877:-1:exon
so has part: feature:1410657-1410869:-1:exon
so has part: feature:1407012-1407128:-1:exon
so has part: feature:1406661-1406675:-1:exon
so has part: feature:1404880-1405922:-1:exon
so has part: feature:1404202-1404238:-1:exon
so has part: feature:1403366-1403427:-1:exon
so has part: feature:1402589-1403246:-1:exon
so has part: feature:1399011-1399073:-1:exon
so has part: feature:1398177-1398298:-1:exon
so has part: feature:1396642-1396797:-1:exon
so has part: feature:1395937-1396271:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1486757-1486884:-1:exon

position:1486757:-1
position: 1486757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1476844-1476847:-1:exon

position:1476844:-1
position: 1476844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1476847:-1
position: 1476847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1472289-1472296:-1:exon

position:1472289:-1
position: 1472289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1472296:-1
position: 1472296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1416716-1416877:-1:exon

position:1416716:-1
position: 1416716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416877:-1
position: 1416877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1410657-1410869:-1:exon

position:1410657:-1
position: 1410657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410869:-1
position: 1410869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1407012-1407128:-1:exon

position:1407012:-1
position: 1407012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1407128:-1
position: 1407128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1406661-1406675:-1:exon

position:1406661:-1
position: 1406661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1406675:-1
position: 1406675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1404880-1405922:-1:exon

position:1404880:-1
position: 1404880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1405922:-1
position: 1405922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1404202-1404238:-1:exon

position:1404202:-1
position: 1404202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404238:-1
position: 1404238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1403366-1403427:-1:exon

position:1403366:-1
position: 1403366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1403427:-1
position: 1403427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1402589-1403246:-1:exon

position:1402589:-1
position: 1402589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1403246:-1
position: 1403246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1399011-1399073:-1:exon

position:1399011:-1
position: 1399011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399073:-1
position: 1399073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1398177-1398298:-1:exon

position:1398177:-1
position: 1398177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398298:-1
position: 1398298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1396642-1396797:-1:exon

position:1396642:-1
position: 1396642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1396797:-1
position: 1396797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1395937-1396271:-1:exon

position:1396271:-1
position: 1396271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ppargc1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ppargc1b
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 8 bases in 7 codons; deleted 5 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: peroxisome proliferator-activated receptor gamma coactivator 1-beta
translation: MAGHDCGALLDEELASFFLNYLADAQGAATGEEHLCADFPELDLSQLDAADFDSAACFGELQWSPEHADTEPPQYSPDDSELFQIDSENEALLAALTKTLDDIPEEDVELAAFPGLDEGDAPSRPSASPGPLSAPPSPAAGRLLAPVSEVDQLSLLQQLLLASSSPTPTSDSQKEGTAWRHAGLRSRSQRPCVKFCNTQDRKAPAPRCQSRDCTELHRHLTSAPACTPGGGPPPRPPSPRPLAGGDEEPGEDRPPPXPAAASPRDSPAPDGAPGPQDARAVLQLIRYMHTYCLPPRKRPPRRPPPAPRPCAPRPPRPPAAASWAEFSILRELLSQDVSCDVRKPYRLATPXYASLAPRRRPGACRDXQAAPAPPPPGEEVRVAASPQSSGPGPSLRPLRLETKADASPRAGTHAEEEDGQEEEEEEQEEDEEEDEEWDRKRLGRGLRWSKLGQRVESPVCPVRRSRRLNPELGPWLTCAAAPPAPSDPRDAPPPSCGASGTFRPGEAGLGGPAADHSGPPRPALEXPCESGCGDPDEDPGCPPLPSTDSPRCLMLALSQSDPLSKKSFEQTLTVELCGTAGLTPPTTPPYKPAEEDPFKPDVRHSPGRDAGXPAPSPAALQPAAPSGVTRQAPGSQAGQKRPFSCSFGDHDYCXVLRPEGVLRGKVLRSRGPSGXPRGGRPGAATPGPPPRDGTPLRDHEIRASLTKHFGLLGAALDGEEPGACASPDYAAGDSGFLLEEEEEEEEEEEDSGVSPPCSDHCPYQSPPSKAGRTPRSRSSSGSSPCRSWSPDARRNGRWGGGGPCPLGTGSVRHARKRRERAMGEGRVVYVRNLSGDVSSRGLRRRLEAFGEVVECQVLTRRERGEKRGLAAFRCSEPAPLSLRHGAAPRRRHEPSRRPSCGGRRPARWPRHPDYDPRVEEARPRPGKSKYEAMDFDSLLREAQQSLH
SIO_010081: Ppargc1b
subclass of: SO_0000673
so part of: Ppargc1b
location: complement(join(1396169..1396271,1396642..1396797,1398177..1398298,1399011..1399073,1402589..1403246,1403366..1403427,1404202..1404238,1404880..1405922,1406661..1406675,1407012..1407128,1410657..1410869,1416716..1416877,1472289..1472296,1476844..1476847,1486757..1486834))
location: region:1396169-1486834:-1
so has part: feature:1486757-1486834:-1:exon
so has part: feature:1476844-1476847:-1:exon
so has part: feature:1472289-1472296:-1:exon
so has part: feature:1416716-1416877:-1:exon
so has part: feature:1410657-1410869:-1:exon
so has part: feature:1407012-1407128:-1:exon
so has part: feature:1406661-1406675:-1:exon
so has part: feature:1404880-1405922:-1:exon
so has part: feature:1404202-1404238:-1:exon
so has part: feature:1403366-1403427:-1:exon
so has part: feature:1402589-1403246:-1:exon
so has part: feature:1399011-1399073:-1:exon
so has part: feature:1398177-1398298:-1:exon
so has part: feature:1396642-1396797:-1:exon
so has part: feature:1396169-1396271:-1:exon

XP_048187072.1
type: Protein
SIO_000068: ncbiprotein

position:1396169:-1
position: 1396169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1486834:-1
position: 1486834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1486757-1486834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1476844-1476847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1472289-1472296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1416716-1416877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1410657-1410869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1407012-1407128:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1406661-1406675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1404880-1405922:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1404202-1404238:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1403366-1403427:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1402589-1403246:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399011-1399073:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1398177-1398298:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1396642-1396797:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1396169-1396271:-1:exon

LOC125339835
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125339835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1425729..1437417
location: region:1425729-1437417:1
so has part: feature:1425729-1437417:1:exon
subclass of: SO_0000011

125339835
type: Gene
SIO_000068: ncbigene

position:1425729:1
position: 1425729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437417:1
position: 1437417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1425729-1437417:1:exon

LOC125339835
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125339835
product: uncharacterized LOC125339835
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007208637.1
SIO_010081: LOC125339835
subclass of: SO_0000673
so part of: LOC125339835
location: join(1425729..1425740,1427363..1427365,1437256..1437417)
location: region:1425729-1437417:1
so has part: feature:1425729-1425740:1:exon
so has part: feature:1427363-1427365:1:exon
so has part: feature:1437256-1437417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1425729-1425740:1:exon

position:1425740:1
position: 1425740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1427363-1427365:1:exon

position:1427363:1
position: 1427363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427365:1
position: 1427365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1437256-1437417:1:exon

position:1437256:1
position: 1437256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125339836
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125339836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1454927..1473675
location: region:1454927-1473675:1
so has part: feature:1454927-1473675:1:exon
subclass of: SO_0000011

125339836
type: Gene
SIO_000068: ncbigene

position:1454927:1
position: 1454927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1473675:1
position: 1473675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1454927-1473675:1:exon

LOC125339836
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125339836
product: uncharacterized LOC125339836
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_007208638.1
SIO_010081: LOC125339836
subclass of: SO_0000673
so part of: LOC125339836
location: join(1454927..1454940,1472403..1472406,1473266..1473675)
location: region:1454927-1473675:1
so has part: feature:1454927-1454940:1:exon
so has part: feature:1472403-1472406:1:exon
so has part: feature:1473266-1473675:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1454927-1454940:1:exon

position:1454940:1
position: 1454940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1472403-1472406:1:exon

position:1472403:1
position: 1472403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472406:1
position: 1472406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1473266-1473675:1:exon

position:1473266:1
position: 1473266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Arhgef37
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Arhgef37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1521859..1541617)
location: region:1521859-1541617:-1
so has part: feature:1521859-1541617:-1:exon
subclass of: SO_0000010

125340178
type: Gene
SIO_000068: ncbigene

position:1521859:-1
position: 1521859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1541617:-1
position: 1541617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1521859-1541617:-1:exon

Arhgef37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arhgef37
product: Rho guanine nucleotide exchange factor 37
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331626.1
SIO_010081: Arhgef37
subclass of: SO_0000673
so part of: Arhgef37
location: complement(join(1521859..1522035,1528187..1528291,1529500..1529630,1529890..1530089,1536553..1536700,1539862..1539985,1541430..1541617))
location: region:1521859-1541617:-1
so has part: feature:1541430-1541617:-1:exon
so has part: feature:1539862-1539985:-1:exon
so has part: feature:1536553-1536700:-1:exon
so has part: feature:1529890-1530089:-1:exon
so has part: feature:1529500-1529630:-1:exon
so has part: feature:1528187-1528291:-1:exon
so has part: feature:1521859-1522035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1541430-1541617:-1:exon

position:1541430:-1
position: 1541430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1539862-1539985:-1:exon

position:1539862:-1
position: 1539862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1539985:-1
position: 1539985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1536553-1536700:-1:exon

position:1536553:-1
position: 1536553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1536700:-1
position: 1536700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1529890-1530089:-1:exon

position:1529890:-1
position: 1529890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1530089:-1
position: 1530089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1529500-1529630:-1:exon

position:1529500:-1
position: 1529500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1529630:-1
position: 1529630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1528187-1528291:-1:exon

position:1528187:-1
position: 1528187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1528291:-1
position: 1528291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1521859-1522035:-1:exon

position:1522035:-1
position: 1522035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Arhgef37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arhgef37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 37
translation: MADPEADEPSSRPGSPSPEGPGSEDRALLHQRLAVRELLDTEASYLHRLRLCASDIRSRLQQLPPGDLNVLFSNMDEIVQLNSRFLHGLQEAASEEEEQARLVGHLFLDFQEELERVYKVYCAGYEKALLLLQEYREEPELHREIQRIIEAVAPQAGPSGLSFFLVSPVQRITKYPLLLHKILENTRPDAAARPVLRRAAAALEEVNANVNEHKMRQELASRYTKVEQLSLRERLARINTHTLSKKTTRLSQLLRQGAGLAPRTEDPEFDEVEERFQRVALCVTELKDNMAAYMDNLEVLVACVQSSLCRYSLYLWLGKKREETSCLPLAEYSYGLAQCLHLQMQQQKLKDELRAD
SIO_010081: Arhgef37
subclass of: SO_0000673
so part of: Arhgef37
location: complement(join(1521859..1522035,1528187..1528291,1529500..1529630,1529890..1530089,1536553..1536700,1539862..1539985,1541430..1541615))
location: region:1521859-1541615:-1
so has part: feature:1541430-1541615:-1:exon
so has part: feature:1539862-1539985:-1:exon
so has part: feature:1536553-1536700:-1:exon
so has part: feature:1529890-1530089:-1:exon
so has part: feature:1529500-1529630:-1:exon
so has part: feature:1528187-1528291:-1:exon
so has part: feature:1521859-1522035:-1:exon

XP_048187583.1
type: Protein
SIO_000068: ncbiprotein

position:1541615:-1
position: 1541615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1541430-1541615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539862-1539985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1536553-1536700:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1529890-1530089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1529500-1529630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1528187-1528291:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1521859-1522035:-1:exon

Csnk1a1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Csnk1a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1559957..1593568
location: region:1559957-1593568:1
so has part: feature:1559957-1593568:1:exon
subclass of: SO_0000010

125339812
type: Gene
SIO_000068: ncbigene

position:1559957:1
position: 1559957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1593568:1
position: 1593568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1559957-1593568:1:exon

Csnk1a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Csnk1a1
product: casein kinase 1 alpha 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331068.1
SIO_010081: Csnk1a1
subclass of: SO_0000673
so part of: Csnk1a1
location: join(1559957..1560155,1560309..1560415,1569173..1569299,1573679..1573777,1576080..1576163,1579977..1580116,1581373..1581451,1582186..1582260,1583982..1584088,1585213..1585361,1592705..1593568)
location: region:1559957-1593568:1
so has part: feature:1559957-1560155:1:exon
so has part: feature:1560309-1560415:1:exon
so has part: feature:1569173-1569299:1:exon
so has part: feature:1573679-1573777:1:exon
so has part: feature:1576080-1576163:1:exon
so has part: feature:1579977-1580116:1:exon
so has part: feature:1581373-1581451:1:exon
so has part: feature:1582186-1582260:1:exon
so has part: feature:1583982-1584088:1:exon
so has part: feature:1585213-1585361:1:exon
so has part: feature:1592705-1593568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1559957-1560155:1:exon

position:1560155:1
position: 1560155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1560309-1560415:1:exon

position:1560309:1
position: 1560309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1560415:1
position: 1560415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1569173-1569299:1:exon

position:1569173:1
position: 1569173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1569299:1
position: 1569299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1573679-1573777:1:exon

position:1573679:1
position: 1573679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1573777:1
position: 1573777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1576080-1576163:1:exon

position:1576080:1
position: 1576080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1576163:1
position: 1576163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1579977-1580116:1:exon

position:1579977:1
position: 1579977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1580116:1
position: 1580116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1581373-1581451:1:exon

position:1581373:1
position: 1581373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581451:1
position: 1581451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1582186-1582260:1:exon

position:1582186:1
position: 1582186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582260:1
position: 1582260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1583982-1584088:1:exon

position:1583982:1
position: 1583982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584088:1
position: 1584088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1585213-1585361:1:exon

position:1585213:1
position: 1585213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585361:1
position: 1585361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1592705-1593568:1:exon

position:1592705:1
position: 1592705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Csnk1a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Csnk1a1
product: casein kinase 1 alpha 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331069.1
SIO_010081: Csnk1a1
subclass of: SO_0000673
so part of: Csnk1a1
location: join(1559957..1560155,1560309..1560415,1569173..1569299,1573679..1573777,1576080..1576163,1579977..1580116,1581373..1581451,1582186..1582260,1583982..1584088,1585213..1585325,1592705..1593568)
location: region:1559957-1593568:1
so has part: feature:1559957-1560155:1:exon
so has part: feature:1560309-1560415:1:exon
so has part: feature:1569173-1569299:1:exon
so has part: feature:1573679-1573777:1:exon
so has part: feature:1576080-1576163:1:exon
so has part: feature:1579977-1580116:1:exon
so has part: feature:1581373-1581451:1:exon
so has part: feature:1582186-1582260:1:exon
so has part: feature:1583982-1584088:1:exon
so has part: feature:1585213-1585325:1:exon
so has part: feature:1592705-1593568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1559957-1560155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560309-1560415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1569173-1569299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1573679-1573777:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1576080-1576163:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1579977-1580116:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1581373-1581451:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1582186-1582260:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1583982-1584088:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1585213-1585325:1:exon

position:1585325:1
position: 1585325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1592705-1593568:1:exon

Csnk1a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Csnk1a1
product: casein kinase 1 alpha 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331070.1
SIO_010081: Csnk1a1
subclass of: SO_0000673
so part of: Csnk1a1
location: join(1559958..1560155,1560309..1560415,1569173..1569299,1573679..1573777,1579977..1580116,1581373..1581451,1582186..1582260,1583982..1584088,1585213..1585361,1592705..1593568)
location: region:1559958-1593568:1
so has part: feature:1559958-1560155:1:exon
so has part: feature:1560309-1560415:1:exon
so has part: feature:1569173-1569299:1:exon
so has part: feature:1573679-1573777:1:exon
so has part: feature:1579977-1580116:1:exon
so has part: feature:1581373-1581451:1:exon
so has part: feature:1582186-1582260:1:exon
so has part: feature:1583982-1584088:1:exon
so has part: feature:1585213-1585361:1:exon
so has part: feature:1592705-1593568:1:exon

position:1559958:1
position: 1559958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1559958-1560155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560309-1560415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1569173-1569299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1573679-1573777:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1579977-1580116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1581373-1581451:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1582186-1582260:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1583982-1584088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1585213-1585361:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1592705-1593568:1:exon

Csnk1a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Csnk1a1
product: casein kinase 1 alpha 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331071.1
SIO_010081: Csnk1a1
subclass of: SO_0000673
so part of: Csnk1a1
location: join(1559958..1560155,1560309..1560415,1569173..1569299,1573679..1573777,1579977..1580116,1581373..1581451,1582186..1582260,1583982..1584088,1585213..1585325,1592705..1593568)
location: region:1559958-1593568:1
so has part: feature:1559958-1560155:1:exon
so has part: feature:1560309-1560415:1:exon
so has part: feature:1569173-1569299:1:exon
so has part: feature:1573679-1573777:1:exon
so has part: feature:1579977-1580116:1:exon
so has part: feature:1581373-1581451:1:exon
so has part: feature:1582186-1582260:1:exon
so has part: feature:1583982-1584088:1:exon
so has part: feature:1585213-1585325:1:exon
so has part: feature:1592705-1593568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1559958-1560155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560309-1560415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1569173-1569299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1573679-1573777:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1579977-1580116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1581373-1581451:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1582186-1582260:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1583982-1584088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1585213-1585325:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1592705-1593568:1:exon

Csnk1a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Csnk1a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I isoform X1
translation: MASSSGSKAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAASSSAQGPQAQTPTGKQTDKTKSNMKGF
SIO_010081: Csnk1a1
subclass of: SO_0000673
so part of: Csnk1a1
location: join(1560033..1560155,1560309..1560415,1569173..1569299,1573679..1573777,1576080..1576163,1579977..1580116,1581373..1581451,1582186..1582260,1583982..1584088,1585213..1585361,1592705..1592712)
location: region:1560033-1592712:1
so has part: feature:1560033-1560155:1:exon
so has part: feature:1560309-1560415:1:exon
so has part: feature:1569173-1569299:1:exon
so has part: feature:1573679-1573777:1:exon
so has part: feature:1576080-1576163:1:exon
so has part: feature:1579977-1580116:1:exon
so has part: feature:1581373-1581451:1:exon
so has part: feature:1582186-1582260:1:exon
so has part: feature:1583982-1584088:1:exon
so has part: feature:1585213-1585361:1:exon
so has part: feature:1592705-1592712:1:exon

XP_048187025.1
type: Protein
SIO_000068: ncbiprotein

position:1560033:1
position: 1560033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1592712:1
position: 1592712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560033-1560155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560309-1560415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1569173-1569299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1573679-1573777:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1576080-1576163:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1579977-1580116:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1581373-1581451:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1582186-1582260:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1583982-1584088:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1585213-1585361:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1592705-1592712:1:exon

Csnk1a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Csnk1a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I isoform X2
translation: MASSSGSKAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAASSSAQGPQAQTPTGF
SIO_010081: Csnk1a1
subclass of: SO_0000673
so part of: Csnk1a1
location: join(1560033..1560155,1560309..1560415,1569173..1569299,1573679..1573777,1576080..1576163,1579977..1580116,1581373..1581451,1582186..1582260,1583982..1584088,1585213..1585325,1592705..1592712)
location: region:1560033-1592712:1
so has part: feature:1560033-1560155:1:exon
so has part: feature:1560309-1560415:1:exon
so has part: feature:1569173-1569299:1:exon
so has part: feature:1573679-1573777:1:exon
so has part: feature:1576080-1576163:1:exon
so has part: feature:1579977-1580116:1:exon
so has part: feature:1581373-1581451:1:exon
so has part: feature:1582186-1582260:1:exon
so has part: feature:1583982-1584088:1:exon
so has part: feature:1585213-1585325:1:exon
so has part: feature:1592705-1592712:1:exon

XP_048187026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1560033-1560155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560309-1560415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1569173-1569299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1573679-1573777:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1576080-1576163:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1579977-1580116:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1581373-1581451:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1582186-1582260:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1583982-1584088:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1585213-1585325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1592705-1592712:1:exon

Csnk1a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Csnk1a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I isoform X3
translation: MASSSGSKAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAASSSAQGPQAQTPTGKQTDKTKSNMKGF
SIO_010081: Csnk1a1
subclass of: SO_0000673
so part of: Csnk1a1
location: join(1560033..1560155,1560309..1560415,1569173..1569299,1573679..1573777,1579977..1580116,1581373..1581451,1582186..1582260,1583982..1584088,1585213..1585361,1592705..1592712)
location: region:1560033-1592712:1
so has part: feature:1560033-1560155:1:exon
so has part: feature:1560309-1560415:1:exon
so has part: feature:1569173-1569299:1:exon
so has part: feature:1573679-1573777:1:exon
so has part: feature:1579977-1580116:1:exon
so has part: feature:1581373-1581451:1:exon
so has part: feature:1582186-1582260:1:exon
so has part: feature:1583982-1584088:1:exon
so has part: feature:1585213-1585361:1:exon
so has part: feature:1592705-1592712:1:exon

XP_048187027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1560033-1560155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560309-1560415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1569173-1569299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1573679-1573777:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1579977-1580116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1581373-1581451:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1582186-1582260:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1583982-1584088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1585213-1585361:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1592705-1592712:1:exon

Csnk1a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Csnk1a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I isoform X4
translation: MASSSGSKAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAASSSAQGPQAQTPTGF
SIO_010081: Csnk1a1
subclass of: SO_0000673
so part of: Csnk1a1
location: join(1560033..1560155,1560309..1560415,1569173..1569299,1573679..1573777,1579977..1580116,1581373..1581451,1582186..1582260,1583982..1584088,1585213..1585325,1592705..1592712)
location: region:1560033-1592712:1
so has part: feature:1560033-1560155:1:exon
so has part: feature:1560309-1560415:1:exon
so has part: feature:1569173-1569299:1:exon
so has part: feature:1573679-1573777:1:exon
so has part: feature:1579977-1580116:1:exon
so has part: feature:1581373-1581451:1:exon
so has part: feature:1582186-1582260:1:exon
so has part: feature:1583982-1584088:1:exon
so has part: feature:1585213-1585325:1:exon
so has part: feature:1592705-1592712:1:exon

XP_048187028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1560033-1560155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560309-1560415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1569173-1569299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1573679-1573777:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1579977-1580116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1581373-1581451:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1582186-1582260:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1583982-1584088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1585213-1585325:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1592705-1592712:1:exon

Il17b
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Il17b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1641510..1645086
location: region:1641510-1645086:1
so has part: feature:1641510-1645086:1:exon
subclass of: SO_0000010

125340080
type: Gene
SIO_000068: ncbigene

position:1641510:1
position: 1641510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1645086:1
position: 1645086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1641510-1645086:1:exon

Il17b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Il17b
product: interleukin 17B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins
transcript id: XM_048331500.1
SIO_010081: Il17b
subclass of: SO_0000673
so part of: Il17b
location: join(1641510..1641530,1643185..1643474,1644855..1645086)
location: region:1641510-1645086:1
so has part: feature:1641510-1641530:1:exon
so has part: feature:1643185-1643474:1:exon
so has part: feature:1644855-1645086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1641510-1641530:1:exon

position:1641530:1
position: 1641530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1643185-1643474:1:exon

position:1643185:1
position: 1643185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1643474:1
position: 1643474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1644855-1645086:1:exon

position:1644855:1
position: 1644855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Il17b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Il17b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-17B
translation: MDWPHSLVLLCATSVLLGLGQPRSPKGKRKGQGRPGAQDPGPQQVPLDLVSRVKPFARMEEYERNLGEMVAQLRNSSEPARRKCEVNLQLWLSNKRSLSPWGYSINHDPGRIPADLPEARCLCLGCVNPFTMQEDRSMVSVPVFSQVPVRRRLCPPAPRPGPCRLRAGMETIAVGCTCIF
SIO_010081: Il17b
subclass of: SO_0000673
so part of: Il17b
location: join(1641510..1641530,1643185..1643474,1644855..1645086)
location: region:1641510-1645086:1
so has part: feature:1641510-1641530:1:exon
so has part: feature:1643185-1643474:1:exon
so has part: feature:1644855-1645086:1:exon

XP_048187457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1641510-1641530:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1643185-1643474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1644855-1645086:1:exon

Pcyox1l
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Pcyox1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1651130..1658785)
location: region:1651130-1658785:-1
so has part: feature:1651130-1658785:-1:exon
subclass of: SO_0000010

125340078
type: Gene
SIO_000068: ncbigene

position:1651130:-1
position: 1651130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1658785:-1
position: 1658785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1651130-1658785:-1:exon

Pcyox1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pcyox1l
product: prenylcysteine oxidase 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048331497.1
SIO_010081: Pcyox1l
subclass of: SO_0000673
so part of: Pcyox1l
location: complement(join(1651130..1651907,1652052..1652192,1653066..1653277,1653575..1653749,1654852..1655058,1658676..1658785))
location: region:1651130-1658785:-1
so has part: feature:1658676-1658785:-1:exon
so has part: feature:1654852-1655058:-1:exon
so has part: feature:1653575-1653749:-1:exon
so has part: feature:1653066-1653277:-1:exon
so has part: feature:1652052-1652192:-1:exon
so has part: feature:1651130-1651907:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1658676-1658785:-1:exon

position:1658676:-1
position: 1658676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1654852-1655058:-1:exon

position:1654852:-1
position: 1654852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1655058:-1
position: 1655058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1653575-1653749:-1:exon

position:1653575:-1
position: 1653575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1653749:-1
position: 1653749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1653066-1653277:-1:exon

position:1653066:-1
position: 1653066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1653277:-1
position: 1653277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1652052-1652192:-1:exon

position:1652052:-1
position: 1652052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1652192:-1
position: 1652192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1651130-1651907:-1:exon

position:1651907:-1
position: 1651907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pcyox1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pcyox1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prenylcysteine oxidase-like
translation: MARAARLLLAALAALLAAAAAAAEGGDAPPGRIAVVGAGIGGSAVAHFLQQHFGPRVQIDVYEKGVVGGRLATISVNKQHYESGTASFHSLSLHMQDFLKLLGLRPRRDVVGRSAIFGGEHLVLEETDWYLLNLFRLWWHYGISFLRLQMWVEEVMEKFMRIYKYQAHGFAFSGVEELLQSLGEAAFLNMTQRSVAEALLQVGVTQRFIDDVVSAVLRASDGQSAAMPAFAGAMSLAGAQGSLWAVEGGNKLVCSGLLKLSKAHVIHATVTSVALHSTEGRALYQVRHESDAGPGSDFYDIVVLAAPLPPDDSSGRFAFEGFAPPVEDVRGSFQPTVVSLVHGYLNSSYFGFPDPKLFPFASILTTDFPGFFCTLDNVCPVNVSASFRRKQPQEAAVWRVQSPAPLLRAQLKTLFRSYYSVQTAEWQAHPVYGSRRGFPRFALHDQLFYLNALEWAASSAEVMAVAAKNVALLAYNRWYQDLDKVDQKDLMHKVKTEL
SIO_010081: Pcyox1l
subclass of: SO_0000673
so part of: Pcyox1l
location: complement(join(1651246..1651907,1652052..1652192,1653066..1653277,1653575..1653749,1654852..1655058,1658676..1658775))
location: region:1651246-1658775:-1
so has part: feature:1658676-1658775:-1:exon
so has part: feature:1654852-1655058:-1:exon
so has part: feature:1653575-1653749:-1:exon
so has part: feature:1653066-1653277:-1:exon
so has part: feature:1652052-1652192:-1:exon
so has part: feature:1651246-1651907:-1:exon

XP_048187454.1
type: Protein
SIO_000068: ncbiprotein

position:1651246:-1
position: 1651246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1658775:-1
position: 1658775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1658676-1658775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1654852-1655058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653575-1653749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653066-1653277:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1652052-1652192:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1651246-1651907:-1:exon

Grpel2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Grpel2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1663005..1670042)
location: region:1663005-1670042:-1
so has part: feature:1663005-1670042:-1:exon
subclass of: SO_0000010

125340008
type: Gene
SIO_000068: ncbigene

position:1663005:-1
position: 1663005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1670042:-1
position: 1670042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1663005-1670042:-1:exon

Grpel2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Grpel2
product: GrpE like 2, mitochondrial
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331388.1
SIO_010081: Grpel2
subclass of: SO_0000673
so part of: Grpel2
location: complement(join(1663005..1664527,1665449..1665530,1666806..1666959,1669830..1670042))
location: region:1663005-1670042:-1
so has part: feature:1669830-1670042:-1:exon
so has part: feature:1666806-1666959:-1:exon
so has part: feature:1665449-1665530:-1:exon
so has part: feature:1663005-1664527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1669830-1670042:-1:exon

position:1669830:-1
position: 1669830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1666806-1666959:-1:exon

position:1666806:-1
position: 1666806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1666959:-1
position: 1666959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1665449-1665530:-1:exon

position:1665449:-1
position: 1665449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1665530:-1
position: 1665530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1663005-1664527:-1:exon

position:1664527:-1
position: 1664527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Grpel2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Grpel2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: grpE protein homolog 2, mitochondrial
translation: MAARSLWAARRRVPRLLACGGPAEGRDWLPPFSTATQRNAGEDCSSEDPPASHGPSIAEQALRLKAVKLEKEVQDLTLRYQRAVADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILENTTKCISEETKPGDQKLTLEKVFRGLSLLEAKLKSVFTKHGLEKMAPIGDKYDPHEHELICHVPAGIGVQPGTVALVRHDGYKLHGRTIRLAQVEVAVESQRRL
SIO_010081: Grpel2
subclass of: SO_0000673
so part of: Grpel2
location: complement(join(1664163..1664527,1665449..1665530,1666806..1666959,1669830..1669906))
location: region:1664163-1669906:-1
so has part: feature:1669830-1669906:-1:exon
so has part: feature:1666806-1666959:-1:exon
so has part: feature:1665449-1665530:-1:exon
so has part: feature:1664163-1664527:-1:exon

XP_048187345.1
type: Protein
SIO_000068: ncbiprotein

position:1664163:-1
position: 1664163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1669906:-1
position: 1669906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1669830-1669906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1666806-1666959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1665449-1665530:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1664163-1664527:-1:exon

Afap1l1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Afap1l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1671755..1718461)
location: region:1671755-1718461:-1
so has part: feature:1671755-1718461:-1:exon
subclass of: SO_0000010

125340009
type: Gene
SIO_000068: ncbigene

position:1671755:-1
position: 1671755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1718461:-1
position: 1718461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1671755-1718461:-1:exon

Afap1l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Afap1l1
product: actin filament associated protein 1 like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331389.1
SIO_010081: Afap1l1
subclass of: SO_0000673
so part of: Afap1l1
location: complement(join(1671755..1672860,1674554..1674682,1679302..1679480,1679727..1679891,1683421..1683535,1683629..1683695,1684310..1684455,1684960..1685171,1685282..1685446,1685667..1685760,1687339..1687431,1688988..1689167,1690509..1690729,1691023..1691121,1692876..1692984,1693217..1693320,1693583..1693661,1695632..1695756,1718430..1718461))
location: region:1671755-1718461:-1
so has part: feature:1718430-1718461:-1:exon
so has part: feature:1695632-1695756:-1:exon
so has part: feature:1693583-1693661:-1:exon
so has part: feature:1693217-1693320:-1:exon
so has part: feature:1692876-1692984:-1:exon
so has part: feature:1691023-1691121:-1:exon
so has part: feature:1690509-1690729:-1:exon
so has part: feature:1688988-1689167:-1:exon
so has part: feature:1687339-1687431:-1:exon
so has part: feature:1685667-1685760:-1:exon
so has part: feature:1685282-1685446:-1:exon
so has part: feature:1684960-1685171:-1:exon
so has part: feature:1684310-1684455:-1:exon
so has part: feature:1683629-1683695:-1:exon
so has part: feature:1683421-1683535:-1:exon
so has part: feature:1679727-1679891:-1:exon
so has part: feature:1679302-1679480:-1:exon
so has part: feature:1674554-1674682:-1:exon
so has part: feature:1671755-1672860:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1718430-1718461:-1:exon

position:1718430:-1
position: 1718430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1695632-1695756:-1:exon

position:1695632:-1
position: 1695632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1695756:-1
position: 1695756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1693583-1693661:-1:exon

position:1693583:-1
position: 1693583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693661:-1
position: 1693661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1693217-1693320:-1:exon

position:1693217:-1
position: 1693217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693320:-1
position: 1693320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1692876-1692984:-1:exon

position:1692876:-1
position: 1692876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1692984:-1
position: 1692984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1691023-1691121:-1:exon

position:1691023:-1
position: 1691023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1691121:-1
position: 1691121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1690509-1690729:-1:exon

position:1690509:-1
position: 1690509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1690729:-1
position: 1690729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1688988-1689167:-1:exon

position:1688988:-1
position: 1688988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1689167:-1
position: 1689167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1687339-1687431:-1:exon

position:1687339:-1
position: 1687339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1687431:-1
position: 1687431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1685667-1685760:-1:exon

position:1685667:-1
position: 1685667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1685760:-1
position: 1685760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1685282-1685446:-1:exon

position:1685282:-1
position: 1685282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1685446:-1
position: 1685446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1684960-1685171:-1:exon

position:1684960:-1
position: 1684960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1685171:-1
position: 1685171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1684310-1684455:-1:exon

position:1684310:-1
position: 1684310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1684455:-1
position: 1684455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1683629-1683695:-1:exon

position:1683629:-1
position: 1683629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1683695:-1
position: 1683695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1683421-1683535:-1:exon

position:1683421:-1
position: 1683421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1683535:-1
position: 1683535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1679727-1679891:-1:exon

position:1679727:-1
position: 1679727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1679891:-1
position: 1679891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1679302-1679480:-1:exon

position:1679302:-1
position: 1679302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1679480:-1
position: 1679480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1674554-1674682:-1:exon

position:1674554:-1
position: 1674554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1674682:-1
position: 1674682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1671755-1672860:-1:exon

position:1672860:-1
position: 1672860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Afap1l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Afap1l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin filament-associated protein 1-like 1
translation: MDRGRVLEQLLPELTGLLSLLDQELLSDSALQKKMAVASILQSLQPLPAKEASGLYANLHSGPSFVESLFEEFDCALGDLQDLAEDDREPSPRASPEPEPAGSPALRSAEDLPPPLPNKPPPEDYYEEALPLGPGKSPEYISSHDGCGPALSLMDGYYEDADGSYPTTRMNGELKSSYNDSDAVSSSYESYDEEEEEEEEGKGRRPRLQWPSEEASLRLVRGCRLCAFLLRKRRFGPWAKQLTLIRDDQLLCYKSSKDRQPALRLALGACAVVYAPKDGRRKRHELRFSQGAAEVLVLALQSREQAEEWLKAIGEVSRSARGAEAADAPRSPVLPCKPQVDKRLSQEKQASDSDSLGVGDGGSTLGRREAGEPGKGKKSGLAELKGSVSRAAGRKINRIISFSKKKAQAEDPQTSSPASSTEDEVPCCGYLNVLAAQGWRQRWCRVGRGTLFFHRDRADLRTHVNAVALRGCRLAPGFGPRHPFAFRLLRHGQAVAVLEASSSEDMGRWLGLLLAEMGSRVTPEALHYDYVDVDTLTSIVSAGRNSFLYARSCQDQWAEPRVYDDVPYEKDEEEPPRPPGAPVKRHASSCTEKPHRADPQVTVKRHASSANQSKYGKTRAEEDARRYLVEKEKLEQEKETIRTELLALRQERRELREALRSGPGARLKALEEAVAGLEAQCRAREERRIDLELKLVAVKERLQQSLAGGPALGLAVGGRGRRKETASPPENGVPDQSLPVNCVSELRKRSPSIVATNQGRVLQKAKEWEMKKT
SIO_010081: Afap1l1
subclass of: SO_0000673
so part of: Afap1l1
location: complement(join(1672837..1672860,1674554..1674682,1679302..1679480,1679727..1679891,1683421..1683535,1683629..1683695,1684310..1684455,1684960..1685171,1685282..1685446,1685667..1685760,1687339..1687431,1688988..1689167,1690509..1690729,1691023..1691121,1692876..1692984,1693217..1693320,1693583..1693661,1695632..1695756,1718430..1718445))
location: region:1672837-1718445:-1
so has part: feature:1718430-1718445:-1:exon
so has part: feature:1695632-1695756:-1:exon
so has part: feature:1693583-1693661:-1:exon
so has part: feature:1693217-1693320:-1:exon
so has part: feature:1692876-1692984:-1:exon
so has part: feature:1691023-1691121:-1:exon
so has part: feature:1690509-1690729:-1:exon
so has part: feature:1688988-1689167:-1:exon
so has part: feature:1687339-1687431:-1:exon
so has part: feature:1685667-1685760:-1:exon
so has part: feature:1685282-1685446:-1:exon
so has part: feature:1684960-1685171:-1:exon
so has part: feature:1684310-1684455:-1:exon
so has part: feature:1683629-1683695:-1:exon
so has part: feature:1683421-1683535:-1:exon
so has part: feature:1679727-1679891:-1:exon
so has part: feature:1679302-1679480:-1:exon
so has part: feature:1674554-1674682:-1:exon
so has part: feature:1672837-1672860:-1:exon

XP_048187346.1
type: Protein
SIO_000068: ncbiprotein

position:1672837:-1
position: 1672837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1718445:-1
position: 1718445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1718430-1718445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1695632-1695756:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1693583-1693661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1693217-1693320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1692876-1692984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1691023-1691121:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1690509-1690729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1688988-1689167:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1687339-1687431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1685667-1685760:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1685282-1685446:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1684960-1685171:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1684310-1684455:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1683629-1683695:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1683421-1683535:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1679727-1679891:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1679302-1679480:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1674554-1674682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1672837-1672860:-1:exon

Ablim3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ablim3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1726270..1815220)
location: region:1726270-1815220:-1
so has part: feature:1726270-1815220:-1:exon
subclass of: SO_0000010

125339875
type: Gene
SIO_000068: ncbigene

position:1726270:-1
position: 1726270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1815220:-1
position: 1815220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1726270-1815220:-1:exon

Ablim3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ablim3
product: actin binding LIM protein family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048331197.1
SIO_010081: Ablim3
subclass of: SO_0000673
so part of: Ablim3
location: complement(join(1726270..1727000,1728216..1728296,1728727..1728734,1729622..1729682,1732075..1732133,1732658..1732687,1734029..1734176,1734981..1735045,1736073..1736207,1736405..1736452,1738608..1738706,1740058..1740187,1745216..1745287,1747847..1747905,1757902..1757989,1762025..1762118,1762854..1762980,1767327..1767439,1769923..1770106,1781417..1781554,1814713..1814818,1815091..1815220))
location: region:1726270-1815220:-1
so has part: feature:1815091-1815220:-1:exon
so has part: feature:1814713-1814818:-1:exon
so has part: feature:1781417-1781554:-1:exon
so has part: feature:1769923-1770106:-1:exon
so has part: feature:1767327-1767439:-1:exon
so has part: feature:1762854-1762980:-1:exon
so has part: feature:1762025-1762118:-1:exon
so has part: feature:1757902-1757989:-1:exon
so has part: feature:1747847-1747905:-1:exon
so has part: feature:1745216-1745287:-1:exon
so has part: feature:1740058-1740187:-1:exon
so has part: feature:1738608-1738706:-1:exon
so has part: feature:1736405-1736452:-1:exon
so has part: feature:1736073-1736207:-1:exon
so has part: feature:1734981-1735045:-1:exon
so has part: feature:1734029-1734176:-1:exon
so has part: feature:1732658-1732687:-1:exon
so has part: feature:1732075-1732133:-1:exon
so has part: feature:1729622-1729682:-1:exon
so has part: feature:1728727-1728734:-1:exon
so has part: feature:1728216-1728296:-1:exon
so has part: feature:1726270-1727000:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1815091-1815220:-1:exon

position:1815091:-1
position: 1815091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1814713-1814818:-1:exon

position:1814713:-1
position: 1814713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1814818:-1
position: 1814818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1781417-1781554:-1:exon

position:1781417:-1
position: 1781417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1781554:-1
position: 1781554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1769923-1770106:-1:exon

position:1769923:-1
position: 1769923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1770106:-1
position: 1770106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1767327-1767439:-1:exon

position:1767327:-1
position: 1767327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1767439:-1
position: 1767439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1762854-1762980:-1:exon

position:1762854:-1
position: 1762854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1762980:-1
position: 1762980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1762025-1762118:-1:exon

position:1762025:-1
position: 1762025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1762118:-1
position: 1762118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1757902-1757989:-1:exon

position:1757902:-1
position: 1757902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1757989:-1
position: 1757989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1747847-1747905:-1:exon

position:1747847:-1
position: 1747847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747905:-1
position: 1747905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1745216-1745287:-1:exon

position:1745216:-1
position: 1745216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1745287:-1
position: 1745287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1740058-1740187:-1:exon

position:1740058:-1
position: 1740058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1740187:-1
position: 1740187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1738608-1738706:-1:exon

position:1738608:-1
position: 1738608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1738706:-1
position: 1738706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1736405-1736452:-1:exon

position:1736405:-1
position: 1736405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1736452:-1
position: 1736452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1736073-1736207:-1:exon

position:1736073:-1
position: 1736073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1736207:-1
position: 1736207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1734981-1735045:-1:exon

position:1734981:-1
position: 1734981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1735045:-1
position: 1735045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1734029-1734176:-1:exon

position:1734029:-1
position: 1734029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1734176:-1
position: 1734176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1732658-1732687:-1:exon

position:1732658:-1
position: 1732658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1732687:-1
position: 1732687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1732075-1732133:-1:exon

position:1732075:-1
position: 1732075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1732133:-1
position: 1732133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1729622-1729682:-1:exon

position:1729622:-1
position: 1729622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1729682:-1
position: 1729682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1728727-1728734:-1:exon

position:1728727:-1
position: 1728727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1728734:-1
position: 1728734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1728216-1728296:-1:exon

position:1728216:-1
position: 1728216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1728296:-1
position: 1728296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1726270-1727000:-1:exon

position:1727000:-1
position: 1727000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ablim3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ablim3
product: actin binding LIM protein family member 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331199.1
SIO_010081: Ablim3
subclass of: SO_0000673
so part of: Ablim3
location: complement(join(1726270..1727000,1728216..1728296,1728727..1728734,1729622..1729682,1732075..1732133,1732658..1732687,1734029..1734176,1734981..1735045,1736073..1736207,1736405..1736452,1738608..1738706,1740058..1740187,1740522..1740551,1742094..1742249,1745216..1745287,1747847..1747905,1757902..1757989,1762025..1762118,1762854..1762980,1767327..1767439,1769923..1770106,1781417..1781554,1814713..1814963))
location: region:1726270-1814963:-1
so has part: feature:1814713-1814963:-1:exon
so has part: feature:1781417-1781554:-1:exon
so has part: feature:1769923-1770106:-1:exon
so has part: feature:1767327-1767439:-1:exon
so has part: feature:1762854-1762980:-1:exon
so has part: feature:1762025-1762118:-1:exon
so has part: feature:1757902-1757989:-1:exon
so has part: feature:1747847-1747905:-1:exon
so has part: feature:1745216-1745287:-1:exon
so has part: feature:1742094-1742249:-1:exon
so has part: feature:1740522-1740551:-1:exon
so has part: feature:1740058-1740187:-1:exon
so has part: feature:1738608-1738706:-1:exon
so has part: feature:1736405-1736452:-1:exon
so has part: feature:1736073-1736207:-1:exon
so has part: feature:1734981-1735045:-1:exon
so has part: feature:1734029-1734176:-1:exon
so has part: feature:1732658-1732687:-1:exon
so has part: feature:1732075-1732133:-1:exon
so has part: feature:1729622-1729682:-1:exon
so has part: feature:1728727-1728734:-1:exon
so has part: feature:1728216-1728296:-1:exon
so has part: feature:1726270-1727000:-1:exon

position:1814963:-1
position: 1814963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1814713-1814963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1781417-1781554:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1769923-1770106:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1767327-1767439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1762854-1762980:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1762025-1762118:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1757902-1757989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1747847-1747905:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1745216-1745287:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742094-1742249:-1:exon

position:1742094:-1
position: 1742094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1742249:-1
position: 1742249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1740522-1740551:-1:exon

position:1740522:-1
position: 1740522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1740551:-1
position: 1740551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1740058-1740187:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1738608-1738706:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1736405-1736452:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1736073-1736207:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1734981-1735045:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1734029-1734176:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1732658-1732687:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1732075-1732133:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1729622-1729682:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1728727-1728734:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1728216-1728296:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1726270-1727000:-1:exon

Ablim3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ablim3
product: actin binding LIM protein family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048331196.1
SIO_010081: Ablim3
subclass of: SO_0000673
so part of: Ablim3
location: complement(join(1726270..1727000,1728216..1728296,1728727..1728734,1729622..1729682,1732075..1732133,1732658..1732687,1734029..1734176,1734981..1735045,1736073..1736207,1736405..1736452,1738608..1738706,1740058..1740187,1745216..1745287,1747847..1747905,1757902..1757989,1762025..1762118,1762854..1762980,1767327..1767439,1769923..1770106,1781417..1781554,1814713..1814958))
location: region:1726270-1814958:-1
so has part: feature:1814713-1814958:-1:exon
so has part: feature:1781417-1781554:-1:exon
so has part: feature:1769923-1770106:-1:exon
so has part: feature:1767327-1767439:-1:exon
so has part: feature:1762854-1762980:-1:exon
so has part: feature:1762025-1762118:-1:exon
so has part: feature:1757902-1757989:-1:exon
so has part: feature:1747847-1747905:-1:exon
so has part: feature:1745216-1745287:-1:exon
so has part: feature:1740058-1740187:-1:exon
so has part: feature:1738608-1738706:-1:exon
so has part: feature:1736405-1736452:-1:exon
so has part: feature:1736073-1736207:-1:exon
so has part: feature:1734981-1735045:-1:exon
so has part: feature:1734029-1734176:-1:exon
so has part: feature:1732658-1732687:-1:exon
so has part: feature:1732075-1732133:-1:exon
so has part: feature:1729622-1729682:-1:exon
so has part: feature:1728727-1728734:-1:exon
so has part: feature:1728216-1728296:-1:exon
so has part: feature:1726270-1727000:-1:exon

position:1814958:-1
position: 1814958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1814713-1814958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1781417-1781554:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1769923-1770106:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1767327-1767439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1762854-1762980:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1762025-1762118:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1757902-1757989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1747847-1747905:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1745216-1745287:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1740058-1740187:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1738608-1738706:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1736405-1736452:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1736073-1736207:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1734981-1735045:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1734029-1734176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1732658-1732687:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1732075-1732133:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1729622-1729682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1728727-1728734:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1728216-1728296:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1726270-1727000:-1:exon

Ablim3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ablim3
product: actin binding LIM protein family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048331198.1
SIO_010081: Ablim3
subclass of: SO_0000673
so part of: Ablim3
location: complement(join(1726270..1727000,1728216..1728296,1728727..1728734,1729622..1729682,1732075..1732133,1732658..1732687,1734029..1734176,1734981..1735045,1736073..1736207,1736405..1736452,1740058..1740187,1745216..1745287,1747847..1747905,1757902..1757989,1762025..1762118,1762854..1762980,1767327..1767439,1769923..1770106,1781417..1781554,1814713..1814955))
location: region:1726270-1814955:-1
so has part: feature:1814713-1814955:-1:exon
so has part: feature:1781417-1781554:-1:exon
so has part: feature:1769923-1770106:-1:exon
so has part: feature:1767327-1767439:-1:exon
so has part: feature:1762854-1762980:-1:exon
so has part: feature:1762025-1762118:-1:exon
so has part: feature:1757902-1757989:-1:exon
so has part: feature:1747847-1747905:-1:exon
so has part: feature:1745216-1745287:-1:exon
so has part: feature:1740058-1740187:-1:exon
so has part: feature:1736405-1736452:-1:exon
so has part: feature:1736073-1736207:-1:exon
so has part: feature:1734981-1735045:-1:exon
so has part: feature:1734029-1734176:-1:exon
so has part: feature:1732658-1732687:-1:exon
so has part: feature:1732075-1732133:-1:exon
so has part: feature:1729622-1729682:-1:exon
so has part: feature:1728727-1728734:-1:exon
so has part: feature:1728216-1728296:-1:exon
so has part: feature:1726270-1727000:-1:exon

position:1814955:-1
position: 1814955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1814713-1814955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1781417-1781554:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1769923-1770106:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1767327-1767439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1762854-1762980:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1762025-1762118:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1757902-1757989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1747847-1747905:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1745216-1745287:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1740058-1740187:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1736405-1736452:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1736073-1736207:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1734981-1735045:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1734029-1734176:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1732658-1732687:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1732075-1732133:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1729622-1729682:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1728727-1728734:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1728216-1728296:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1726270-1727000:-1:exon

Ablim3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ablim3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-binding LIM protein 3 isoform X2
translation: MNTSVPYQQTPYSPRGSSNVIQCYRCGDTCKGEVVRVHNNHFHIRCFTCQVCGCGLAQSGFFFKNQEYICTQDYQQLYGTRCDSCRDFITGEVISALGRTYHPKCFVCSLCRKPFPIGDKVTFSGKDCVCQTCSQSMTSSKPIKIRGPSHCAGCKEEIKHGQSLLALDKQWHVSCFKCQTCGVILTGEYISKDGVPYCEADYHSQFGIKCETCDRYISGRVLEAGGKHYHPTCARCVRCHQMFTEGEEMYLTGSEVWHPICKQAARAEKKLKHRRTSETSISPPGSSIGSPNRVICDIYENLDLRQRRASSPGYIDSPTYSRQGMSPTFSRSPHHYYRAAGESNIYRKPPIYKRHGDLSTATKSKTSEDISQASKYSPAYSPDPYYASESEYWTYHGSPKVPRARRFSSGGEEDDFDHSMHKLQSGIGRLILKEEMKARASSYADPWTPPRSSASSREALHTAGYDLSLNGSPRSHYLADSDPLISKSASLPAYRRNGLHRTPSADLFHYDSMNAVNWGLREYKIYPYELLLVTTRGRNRLPKDVDRTRLERHLSQEEFYQVFGMTISEFERLALWKRNELKKQARLF
SIO_010081: Ablim3
subclass of: SO_0000673
so part of: Ablim3
location: complement(join(1726887..1727000,1728216..1728296,1728727..1728734,1729622..1729682,1732075..1732133,1732658..1732687,1734029..1734176,1734981..1735045,1736073..1736207,1736405..1736452,1740058..1740187,1745216..1745287,1747847..1747905,1757902..1757989,1762025..1762118,1762854..1762980,1767327..1767439,1769923..1770106,1781417..1781554,1814713..1814725))
location: region:1726887-1814725:-1
so has part: feature:1814713-1814725:-1:exon
so has part: feature:1781417-1781554:-1:exon
so has part: feature:1769923-1770106:-1:exon
so has part: feature:1767327-1767439:-1:exon
so has part: feature:1762854-1762980:-1:exon
so has part: feature:1762025-1762118:-1:exon
so has part: feature:1757902-1757989:-1:exon
so has part: feature:1747847-1747905:-1:exon
so has part: feature:1745216-1745287:-1:exon
so has part: feature:1740058-1740187:-1:exon
so has part: feature:1736405-1736452:-1:exon
so has part: feature:1736073-1736207:-1:exon
so has part: feature:1734981-1735045:-1:exon
so has part: feature:1734029-1734176:-1:exon
so has part: feature:1732658-1732687:-1:exon
so has part: feature:1732075-1732133:-1:exon
so has part: feature:1729622-1729682:-1:exon
so has part: feature:1728727-1728734:-1:exon
so has part: feature:1728216-1728296:-1:exon
so has part: feature:1726887-1727000:-1:exon

XP_048187155.1
type: Protein
SIO_000068: ncbiprotein

position:1726887:-1
position: 1726887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1814725:-1
position: 1814725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1814713-1814725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1781417-1781554:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1769923-1770106:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1767327-1767439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1762854-1762980:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1762025-1762118:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1757902-1757989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1747847-1747905:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1745216-1745287:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1740058-1740187:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1736405-1736452:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1736073-1736207:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1734981-1735045:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1734029-1734176:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1732658-1732687:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1732075-1732133:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1729622-1729682:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1728727-1728734:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1728216-1728296:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1726887-1727000:-1:exon

Ablim3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ablim3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-binding LIM protein 3 isoform X1
translation: MNTSVPYQQTPYSPRGSSNVIQCYRCGDTCKGEVVRVHNNHFHIRCFTCQVCGCGLAQSGFFFKNQEYICTQDYQQLYGTRCDSCRDFITGEVISALGRTYHPKCFVCSLCRKPFPIGDKVTFSGKDCVCQTCSQSMTSSKPIKIRGPSHCAGCKEEIKHGQSLLALDKQWHVSCFKCQTCGVILTGEYISKDGVPYCEADYHSQFGIKCETCDRYISGRVLEAGGKHYHPTCARCVRCHQMFTEGEEMYLTGSEVWHPICKQAARAEKKLKHRRTSETSISPPGSSIGSPNRVICDIYENLDLRQRRASSPGYIDSPTYSRQGMSPTFSRSPHHYYRAGPESGRSSPYHSQLDVRSSTPTSYQAPKHFHIPAGESNIYRKPPIYKRHGDLSTATKSKTSEDISQASKYSPAYSPDPYYASESEYWTYHGSPKVPRARRFSSGGEEDDFDHSMHKLQSGIGRLILKEEMKARASSYADPWTPPRSSASSREALHTAGYDLSLNGSPRSHYLADSDPLISKSASLPAYRRNGLHRTPSADLFHYDSMNAVNWGLREYKIYPYELLLVTTRGRNRLPKDVDRTRLERHLSQEEFYQVFGMTISEFERLALWKRNELKKQARLF
SIO_010081: Ablim3
subclass of: SO_0000673
so part of: Ablim3
location: complement(join(1726887..1727000,1728216..1728296,1728727..1728734,1729622..1729682,1732075..1732133,1732658..1732687,1734029..1734176,1734981..1735045,1736073..1736207,1736405..1736452,1738608..1738706,1740058..1740187,1745216..1745287,1747847..1747905,1757902..1757989,1762025..1762118,1762854..1762980,1767327..1767439,1769923..1770106,1781417..1781554,1814713..1814725))
location: region:1726887-1814725:-1
so has part: feature:1814713-1814725:-1:exon
so has part: feature:1781417-1781554:-1:exon
so has part: feature:1769923-1770106:-1:exon
so has part: feature:1767327-1767439:-1:exon
so has part: feature:1762854-1762980:-1:exon
so has part: feature:1762025-1762118:-1:exon
so has part: feature:1757902-1757989:-1:exon
so has part: feature:1747847-1747905:-1:exon
so has part: feature:1745216-1745287:-1:exon
so has part: feature:1740058-1740187:-1:exon
so has part: feature:1738608-1738706:-1:exon
so has part: feature:1736405-1736452:-1:exon
so has part: feature:1736073-1736207:-1:exon
so has part: feature:1734981-1735045:-1:exon
so has part: feature:1734029-1734176:-1:exon
so has part: feature:1732658-1732687:-1:exon
so has part: feature:1732075-1732133:-1:exon
so has part: feature:1729622-1729682:-1:exon
so has part: feature:1728727-1728734:-1:exon
so has part: feature:1728216-1728296:-1:exon
so has part: feature:1726887-1727000:-1:exon

XP_048187153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1814713-1814725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1781417-1781554:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1769923-1770106:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1767327-1767439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1762854-1762980:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1762025-1762118:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1757902-1757989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1747847-1747905:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1745216-1745287:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1740058-1740187:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1738608-1738706:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1736405-1736452:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1736073-1736207:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1734981-1735045:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1734029-1734176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1732658-1732687:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1732075-1732133:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1729622-1729682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1728727-1728734:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1728216-1728296:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1726887-1727000:-1:exon

Ablim3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ablim3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-binding LIM protein 3 isoform X1
translation: MNTSVPYQQTPYSPRGSSNVIQCYRCGDTCKGEVVRVHNNHFHIRCFTCQVCGCGLAQSGFFFKNQEYICTQDYQQLYGTRCDSCRDFITGEVISALGRTYHPKCFVCSLCRKPFPIGDKVTFSGKDCVCQTCSQSMTSSKPIKIRGPSHCAGCKEEIKHGQSLLALDKQWHVSCFKCQTCGVILTGEYISKDGVPYCEADYHSQFGIKCETCDRYISGRVLEAGGKHYHPTCARCVRCHQMFTEGEEMYLTGSEVWHPICKQAARAEKKLKHRRTSETSISPPGSSIGSPNRVICDIYENLDLRQRRASSPGYIDSPTYSRQGMSPTFSRSPHHYYRAGPESGRSSPYHSQLDVRSSTPTSYQAPKHFHIPAGESNIYRKPPIYKRHGDLSTATKSKTSEDISQASKYSPAYSPDPYYASESEYWTYHGSPKVPRARRFSSGGEEDDFDHSMHKLQSGIGRLILKEEMKARASSYADPWTPPRSSASSREALHTAGYDLSLNGSPRSHYLADSDPLISKSASLPAYRRNGLHRTPSADLFHYDSMNAVNWGLREYKIYPYELLLVTTRGRNRLPKDVDRTRLERHLSQEEFYQVFGMTISEFERLALWKRNELKKQARLF
SIO_010081: Ablim3
subclass of: SO_0000673
so part of: Ablim3
location: complement(join(1726887..1727000,1728216..1728296,1728727..1728734,1729622..1729682,1732075..1732133,1732658..1732687,1734029..1734176,1734981..1735045,1736073..1736207,1736405..1736452,1738608..1738706,1740058..1740187,1745216..1745287,1747847..1747905,1757902..1757989,1762025..1762118,1762854..1762980,1767327..1767439,1769923..1770106,1781417..1781554,1814713..1814725))
location: region:1726887-1814725:-1
so has part: feature:1814713-1814725:-1:exon
so has part: feature:1781417-1781554:-1:exon
so has part: feature:1769923-1770106:-1:exon
so has part: feature:1767327-1767439:-1:exon
so has part: feature:1762854-1762980:-1:exon
so has part: feature:1762025-1762118:-1:exon
so has part: feature:1757902-1757989:-1:exon
so has part: feature:1747847-1747905:-1:exon
so has part: feature:1745216-1745287:-1:exon
so has part: feature:1740058-1740187:-1:exon
so has part: feature:1738608-1738706:-1:exon
so has part: feature:1736405-1736452:-1:exon
so has part: feature:1736073-1736207:-1:exon
so has part: feature:1734981-1735045:-1:exon
so has part: feature:1734029-1734176:-1:exon
so has part: feature:1732658-1732687:-1:exon
so has part: feature:1732075-1732133:-1:exon
so has part: feature:1729622-1729682:-1:exon
so has part: feature:1728727-1728734:-1:exon
so has part: feature:1728216-1728296:-1:exon
so has part: feature:1726887-1727000:-1:exon

XP_048187154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1814713-1814725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1781417-1781554:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1769923-1770106:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1767327-1767439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1762854-1762980:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1762025-1762118:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1757902-1757989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1747847-1747905:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1745216-1745287:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1740058-1740187:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1738608-1738706:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1736405-1736452:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1736073-1736207:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1734981-1735045:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1734029-1734176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1732658-1732687:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1732075-1732133:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1729622-1729682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1728727-1728734:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1728216-1728296:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1726887-1727000:-1:exon

Ablim3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ablim3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-binding LIM protein 3 isoform X3
translation: MNTSVPYQQTPYSPRGSSNVIQCYRCGDTCKGEVVRVHNNHFHIRCFTCQVCGCGLAQSGFFFKNQEYICTQDYQQLYGTRCDSCRDFITGEVISALGRTYHPKCFVCSLCRKPFPIGDKVTFSGKDCVCQTCSQSMTSSKPIKIRGPSHCAGCKEEIKHGQSLLALDKQWHVSCFKCQTCGVILTGEYISKDGVPYCEADYHSQFGIKCETCDRYISGRVLEAGGKHYHPTCARCVRCHQMFTEGEEMYLTGSEVWHPICKQAARAEKKLKHRRTSETSISPPGSSIGSPNRVICAKVDNEILNYKDLAALPKVKSIYEVQRPDLISYEPHSRYTSDEMLERCGYGESLGTLSPYSQDIYENLDLRQRRASSPGYIDSPTYSRQGMSPTFSRSPHHYYRAGPESGRSSPYHSQLDVRSSTPTSYQAPKHFHIPAGESNIYRKPPIYKRHGDLSTATKSKTSEDISQASKYSPAYSPDPYYASESEYWTYHGSPKVPRARRFSSGGEEDDFDHSMHKLQSGIGRLILKEEMKARASSYADPWTPPRSSASSREALHTAGYDLSLNGSPRSHYLADSDPLISKSASLPAYRRNGLHRTPSADLFHYDSMNAVNWGLREYKIYPYELLLVTTRGRNRLPKDVDRTRLERHLSQEEFYQVFGMTISEFERLALWKRNELKKQARLF
SIO_010081: Ablim3
subclass of: SO_0000673
so part of: Ablim3
location: complement(join(1726887..1727000,1728216..1728296,1728727..1728734,1729622..1729682,1732075..1732133,1732658..1732687,1734029..1734176,1734981..1735045,1736073..1736207,1736405..1736452,1738608..1738706,1740058..1740187,1740522..1740551,1742094..1742249,1745216..1745287,1747847..1747905,1757902..1757989,1762025..1762118,1762854..1762980,1767327..1767439,1769923..1770106,1781417..1781554,1814713..1814725))
location: region:1726887-1814725:-1
so has part: feature:1814713-1814725:-1:exon
so has part: feature:1781417-1781554:-1:exon
so has part: feature:1769923-1770106:-1:exon
so has part: feature:1767327-1767439:-1:exon
so has part: feature:1762854-1762980:-1:exon
so has part: feature:1762025-1762118:-1:exon
so has part: feature:1757902-1757989:-1:exon
so has part: feature:1747847-1747905:-1:exon
so has part: feature:1745216-1745287:-1:exon
so has part: feature:1742094-1742249:-1:exon
so has part: feature:1740522-1740551:-1:exon
so has part: feature:1740058-1740187:-1:exon
so has part: feature:1738608-1738706:-1:exon
so has part: feature:1736405-1736452:-1:exon
so has part: feature:1736073-1736207:-1:exon
so has part: feature:1734981-1735045:-1:exon
so has part: feature:1734029-1734176:-1:exon
so has part: feature:1732658-1732687:-1:exon
so has part: feature:1732075-1732133:-1:exon
so has part: feature:1729622-1729682:-1:exon
so has part: feature:1728727-1728734:-1:exon
so has part: feature:1728216-1728296:-1:exon
so has part: feature:1726887-1727000:-1:exon

XP_048187156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1814713-1814725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1781417-1781554:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1769923-1770106:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1767327-1767439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1762854-1762980:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1762025-1762118:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1757902-1757989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1747847-1747905:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1745216-1745287:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742094-1742249:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1740522-1740551:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1740058-1740187:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1738608-1738706:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1736405-1736452:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1736073-1736207:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1734981-1735045:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1734029-1734176:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1732658-1732687:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1732075-1732133:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1729622-1729682:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1728727-1728734:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1728216-1728296:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1726887-1727000:-1:exon

LOC125339888
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125339888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1831051..1850677)
location: region:1831051-1850677:-1
so has part: feature:1831051-1850677:-1:exon
subclass of: SO_0000011

125339888
type: Gene
SIO_000068: ncbigene

position:1831051:-1
position: 1831051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1850677:-1
position: 1850677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1831051-1850677:-1:exon

LOC125339888
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125339888
product: uncharacterized LOC125339888
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007208651.1
SIO_010081: LOC125339888
subclass of: SO_0000673
so part of: LOC125339888
location: complement(join(1831051..1831062,1837866..1837873,1850514..1850677))
location: region:1831051-1850677:-1
so has part: feature:1850514-1850677:-1:exon
so has part: feature:1837866-1837873:-1:exon
so has part: feature:1831051-1831062:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1850514-1850677:-1:exon

position:1850514:-1
position: 1850514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1837866-1837873:-1:exon

position:1837866:-1
position: 1837866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1837873:-1
position: 1837873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1831051-1831062:-1:exon

position:1831062:-1
position: 1831062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sh3tc2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Sh3tc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1834775..1877992
location: region:1834775-1877992:1
so has part: feature:1834775-1877992:1:exon
subclass of: SO_0000010

125339887
type: Gene
SIO_000068: ncbigene

position:1834775:1
position: 1834775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1877992:1
position: 1877992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1834775-1877992:1:exon

Sh3tc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sh3tc2
product: SH3 domain and tetratricopeptide repeats 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048331217.1
SIO_010081: Sh3tc2
subclass of: SO_0000673
so part of: Sh3tc2
location: join(1834775..1834976,1841144..1841242,1841734..1841861,1845918..1846023,1847566..1847709,1848948..1849149,1850028..1850101,1852573..1852768,1859322..1859455,1861303..1861344,1861468..1863159,1863269..1863449,1871684..1871834,1872713..1872835,1874397..1874547,1876165..1876376,1877751..1877992)
location: region:1834775-1877992:1
so has part: feature:1834775-1834976:1:exon
so has part: feature:1841144-1841242:1:exon
so has part: feature:1841734-1841861:1:exon
so has part: feature:1845918-1846023:1:exon
so has part: feature:1847566-1847709:1:exon
so has part: feature:1848948-1849149:1:exon
so has part: feature:1850028-1850101:1:exon
so has part: feature:1852573-1852768:1:exon
so has part: feature:1859322-1859455:1:exon
so has part: feature:1861303-1861344:1:exon
so has part: feature:1861468-1863159:1:exon
so has part: feature:1863269-1863449:1:exon
so has part: feature:1871684-1871834:1:exon
so has part: feature:1872713-1872835:1:exon
so has part: feature:1874397-1874547:1:exon
so has part: feature:1876165-1876376:1:exon
so has part: feature:1877751-1877992:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1834775-1834976:1:exon

position:1834976:1
position: 1834976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1841144-1841242:1:exon

position:1841144:1
position: 1841144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1841242:1
position: 1841242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1841734-1841861:1:exon

position:1841734:1
position: 1841734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1841861:1
position: 1841861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1845918-1846023:1:exon

position:1845918:1
position: 1845918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1846023:1
position: 1846023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1847566-1847709:1:exon

position:1847566:1
position: 1847566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1847709:1
position: 1847709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1848948-1849149:1:exon

position:1848948:1
position: 1848948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1849149:1
position: 1849149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1850028-1850101:1:exon

position:1850028:1
position: 1850028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1850101:1
position: 1850101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1852573-1852768:1:exon

position:1852573:1
position: 1852573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1852768:1
position: 1852768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1859322-1859455:1:exon

position:1859322:1
position: 1859322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1859455:1
position: 1859455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1861303-1861344:1:exon

position:1861303:1
position: 1861303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1861344:1
position: 1861344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1861468-1863159:1:exon

position:1861468:1
position: 1861468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863159:1
position: 1863159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1863269-1863449:1:exon

position:1863269:1
position: 1863269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863449:1
position: 1863449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1871684-1871834:1:exon

position:1871684:1
position: 1871684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871834:1
position: 1871834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1872713-1872835:1:exon

position:1872713:1
position: 1872713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1872835:1
position: 1872835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1874397-1874547:1:exon

position:1874397:1
position: 1874397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1874547:1
position: 1874547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1876165-1876376:1:exon

position:1876165:1
position: 1876165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1876376:1
position: 1876376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1877751-1877992:1:exon

position:1877751:1
position: 1877751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sh3tc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sh3tc2
product: SH3 domain and tetratricopeptide repeats 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048331218.1
SIO_010081: Sh3tc2
subclass of: SO_0000673
so part of: Sh3tc2
location: join(1834775..1834976,1841144..1841242,1841734..1841861,1845918..1846023,1847566..1847709,1848948..1849149,1850028..1850101,1852573..1852768,1859322..1859455,1861303..1861344,1861468..1863159,1863269..1863449,1871684..1871834,1872713..1872835,1874397..1874547,1876180..1876376,1877751..1877990)
location: region:1834775-1877990:1
so has part: feature:1834775-1834976:1:exon
so has part: feature:1841144-1841242:1:exon
so has part: feature:1841734-1841861:1:exon
so has part: feature:1845918-1846023:1:exon
so has part: feature:1847566-1847709:1:exon
so has part: feature:1848948-1849149:1:exon
so has part: feature:1850028-1850101:1:exon
so has part: feature:1852573-1852768:1:exon
so has part: feature:1859322-1859455:1:exon
so has part: feature:1861303-1861344:1:exon
so has part: feature:1861468-1863159:1:exon
so has part: feature:1863269-1863449:1:exon
so has part: feature:1871684-1871834:1:exon
so has part: feature:1872713-1872835:1:exon
so has part: feature:1874397-1874547:1:exon
so has part: feature:1876180-1876376:1:exon
so has part: feature:1877751-1877990:1:exon

position:1877990:1
position: 1877990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1834775-1834976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1841144-1841242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1841734-1841861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1845918-1846023:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1847566-1847709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1848948-1849149:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1850028-1850101:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1852573-1852768:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1859322-1859455:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1861303-1861344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1861468-1863159:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1863269-1863449:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1871684-1871834:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1872713-1872835:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1874397-1874547:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1876180-1876376:1:exon

position:1876180:1
position: 1876180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1877751-1877990:1:exon

Sh3tc2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 214514
gene: Sh3tc2
product: SH3 domain and tetratricopeptide repeats 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_007208650.1
SIO_010081: Sh3tc2
so part of: Sh3tc2
location: join(1834775..1834976,1841144..1841242,1841734..1841861,1845918..1846023,1847566..1847709,1848948..1849149,1850028..1850101,1852573..1852768,1859322..1859455,1861303..1861344,1861468..1863159,1863309..1863449,1871684..1871834,1872713..1872835,1874397..1874534)
location: region:1834775-1874534:1
so has part: feature:1834775-1834976:1:exon
so has part: feature:1841144-1841242:1:exon
so has part: feature:1841734-1841861:1:exon
so has part: feature:1845918-1846023:1:exon
so has part: feature:1847566-1847709:1:exon
so has part: feature:1848948-1849149:1:exon
so has part: feature:1850028-1850101:1:exon
so has part: feature:1852573-1852768:1:exon
so has part: feature:1859322-1859455:1:exon
so has part: feature:1861303-1861344:1:exon
so has part: feature:1861468-1863159:1:exon
so has part: feature:1863309-1863449:1:exon
so has part: feature:1871684-1871834:1:exon
so has part: feature:1872713-1872835:1:exon
so has part: feature:1874397-1874534:1:exon

position:1874534:1
position: 1874534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1834775-1834976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1841144-1841242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1841734-1841861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1845918-1846023:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1847566-1847709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1848948-1849149:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1850028-1850101:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1852573-1852768:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1859322-1859455:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1861303-1861344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1861468-1863159:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1863309-1863449:1:exon

position:1863309:1
position: 1863309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1871684-1871834:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1872713-1872835:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1874397-1874534:1:exon

Sh3tc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sh3tc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
translation: MGGCFCIPGERSPSRGSGREGPFKGSTLSSQHVSSSEHEEKCFPRQKMTQDLTLSFSVKSRSRRCVNGPLQEAARRRLWALENRDQDVRALFKDLSARLVSIHSQKGQFLITFKTMEEIWKFSTYLKLGYVSTCLAYLLFDHKYWLNSRLVEDTEIQVSVDDEHLENMYMGLLIQEGHFVCRATCSVVPPAEKDGECLTLCKNELISVKLSADEAEWEGGSLVTGQRGLVPVSALEPLSVPFHQWFLRNYPGSCGLFRRRDWTGSYQIGRGRCKAVMDYQQQRKGELSFLQGESLEVIGFVIPGLQWFIGKSVSSGEVGFVPTRTIDPGSCSPMSKSSAFFSDEERSSLWTLGHDRKAEYVSFLRMLAHTDITSVYRLGGFESIQNLPNDLSASQPEGFKEARHGGTGEESQVLASRRSSSSVDSSMEDELLSATSDDYHLPEPDDLDDPELFMDLHDGQDEEEAENFASILAFLDRKGYTDSFKNLYDSSFSCLTSFFYDFTEEAQLVVYLEASRKWAKRRRLTWAHARLCFLLGRLSVRKVKLSQARVYFEEAIRVLDGAFEDLVLVATLHVNLAAIYLKQRLKPQDPTLLEKAGALLACLPGHEFGARNELDVVAYVLRQGVAAGSRPLEARACFLALRLLLSLGRHEEALPFAERLQVLSGLPLASDAMAAVLSFLYDRKYLPYLAVASVQQWCRQGAQRTALPVWQVSLVLQNAARLLGAPPSAWDEVSVLACPTLRRALAVCEEPADPGPRRALCLILSKLHLQHGAPAGAVHHLSQSLALGERLGEQEALESSLCLAWAYLLASRAKEALGILEPLLDSLKATECGTRRGVVHNLLGLALQEEGQVGRAAKSYLQALHRAQEAGDVRNQAVATANLGNLKGGAQQPDRDYLLQAVRLYSELEASKETDVELVQVLLWLAQDMVSGRQLTQSRFCYEVALLFGLRNRHLKSQLQVTKSLCHFYSSVSPNPEACITYHEHWLALAQQLRDRDMEGRLLESLGQLYRNLNTARSLRRSLHCIKESLRIFIDLGERDKAAEAWLGAGRLHYLIQEDELVELYLQAAIQTALKSEELSLALKLHEEAGDLFFNGARHRHRAVEYYRAGAVPLARRMKAVRTELRIFNKLTELQISLRGYEKALEFATLAARLSVVTVFLFLGDQKQKLVAFHRLATVYYSLNMYEMAEDCYLKTLSLCPPCMQSPKEALYYAKVYYRLGQLTFHQLKDAHDAAEYLLLALAAAVELGDAELQGRVRSRLELVFRSPLWTSSPSGGSSERARWLSGGGLAF
SIO_010081: Sh3tc2
subclass of: SO_0000673
so part of: Sh3tc2
location: join(1834925..1834976,1841144..1841242,1841734..1841861,1845918..1846023,1847566..1847709,1848948..1849149,1850028..1850101,1852573..1852768,1859322..1859455,1861303..1861344,1861468..1863159,1863269..1863449,1871684..1871834,1872713..1872835,1874397..1874547,1876165..1876376,1877751..1877942)
location: region:1834925-1877942:1
so has part: feature:1834925-1834976:1:exon
so has part: feature:1841144-1841242:1:exon
so has part: feature:1841734-1841861:1:exon
so has part: feature:1845918-1846023:1:exon
so has part: feature:1847566-1847709:1:exon
so has part: feature:1848948-1849149:1:exon
so has part: feature:1850028-1850101:1:exon
so has part: feature:1852573-1852768:1:exon
so has part: feature:1859322-1859455:1:exon
so has part: feature:1861303-1861344:1:exon
so has part: feature:1861468-1863159:1:exon
so has part: feature:1863269-1863449:1:exon
so has part: feature:1871684-1871834:1:exon
so has part: feature:1872713-1872835:1:exon
so has part: feature:1874397-1874547:1:exon
so has part: feature:1876165-1876376:1:exon
so has part: feature:1877751-1877942:1:exon

XP_048187174.1
type: Protein
SIO_000068: ncbiprotein

position:1834925:1
position: 1834925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1877942:1
position: 1877942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1834925-1834976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1841144-1841242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1841734-1841861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1845918-1846023:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1847566-1847709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1848948-1849149:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1850028-1850101:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1852573-1852768:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1859322-1859455:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1861303-1861344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1861468-1863159:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1863269-1863449:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1871684-1871834:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1872713-1872835:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1874397-1874547:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1876165-1876376:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1877751-1877942:1:exon

Sh3tc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sh3tc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X2
translation: MGGCFCIPGERSPSRGSGREGPFKGSTLSSQHVSSSEHEEKCFPRQKMTQDLTLSFSVKSRSRRCVNGPLQEAARRRLWALENRDQDVRALFKDLSARLVSIHSQKGQFLITFKTMEEIWKFSTYLKLGYVSTCLAYLLFDHKYWLNSRLVEDTEIQVSVDDEHLENMYMGLLIQEGHFVCRATCSVVPPAEKDGECLTLCKNELISVKLSADEAEWEGGSLVTGQRGLVPVSALEPLSVPFHQWFLRNYPGSCGLFRRRDWTGSYQIGRGRCKAVMDYQQQRKGELSFLQGESLEVIGFVIPGLQWFIGKSVSSGEVGFVPTRTIDPGSCSPMSKSSAFFSDEERSSLWTLGHDRKAEYVSFLRMLAHTDITSVYRLGGFESIQNLPNDLSASQPEGFKEARHGGTGEESQVLASRRSSSSVDSSMEDELLSATSDDYHLPEPDDLDDPELFMDLHDGQDEEEAENFASILAFLDRKGYTDSFKNLYDSSFSCLTSFFYDFTEEAQLVVYLEASRKWAKRRRLTWAHARLCFLLGRLSVRKVKLSQARVYFEEAIRVLDGAFEDLVLVATLHVNLAAIYLKQRLKPQDPTLLEKAGALLACLPGHEFGARNELDVVAYVLRQGVAAGSRPLEARACFLALRLLLSLGRHEEALPFAERLQVLSGLPLASDAMAAVLSFLYDRKYLPYLAVASVQQWCRQGAQRTALPVWQVSLVLQNAARLLGAPPSAWDEVSVLACPTLRRALAVCEEPADPGPRRALCLILSKLHLQHGAPAGAVHHLSQSLALGERLGEQEALESSLCLAWAYLLASRAKEALGILEPLLDSLKATECGTRRGVVHNLLGLALQEEGQVGRAAKSYLQALHRAQEAGDVRNQAVATANLGNLKGGAQQPDRDYLLQAVRLYSELEASKETDVELVQVLLWLAQDMVSGRQLTQSRFCYEVALLFGLRNRHLKSQLQVTKSLCHFYSSVSPNPEACITYHEHWLALAQQLRDRDMEGRLLESLGQLYRNLNTARSLRRSLHCIKESLRIFIDLGERDKAAEAWLGAGRLHYLIQEDELVELYLQAAIQTALKSEELSLALKLHEEAGDLFFNGARHRHRAVEYYRAGAVPLARRMKAVRTELRIFNKLTELQISLRGYEKALEFATLAARLSVVTGDQKQKLVAFHRLATVYYSLNMYEMAEDCYLKTLSLCPPCMQSPKEALYYAKVYYRLGQLTFHQLKDAHDAAEYLLLALAAAVELGDAELQGRVRSRLELVFRSPLWTSSPSGGSSERARWLSGGGLAF
SIO_010081: Sh3tc2
subclass of: SO_0000673
so part of: Sh3tc2
location: join(1834925..1834976,1841144..1841242,1841734..1841861,1845918..1846023,1847566..1847709,1848948..1849149,1850028..1850101,1852573..1852768,1859322..1859455,1861303..1861344,1861468..1863159,1863269..1863449,1871684..1871834,1872713..1872835,1874397..1874547,1876180..1876376,1877751..1877942)
location: region:1834925-1877942:1
so has part: feature:1834925-1834976:1:exon
so has part: feature:1841144-1841242:1:exon
so has part: feature:1841734-1841861:1:exon
so has part: feature:1845918-1846023:1:exon
so has part: feature:1847566-1847709:1:exon
so has part: feature:1848948-1849149:1:exon
so has part: feature:1850028-1850101:1:exon
so has part: feature:1852573-1852768:1:exon
so has part: feature:1859322-1859455:1:exon
so has part: feature:1861303-1861344:1:exon
so has part: feature:1861468-1863159:1:exon
so has part: feature:1863269-1863449:1:exon
so has part: feature:1871684-1871834:1:exon
so has part: feature:1872713-1872835:1:exon
so has part: feature:1874397-1874547:1:exon
so has part: feature:1876180-1876376:1:exon
so has part: feature:1877751-1877942:1:exon

XP_048187175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1834925-1834976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1841144-1841242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1841734-1841861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1845918-1846023:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1847566-1847709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1848948-1849149:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1850028-1850101:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1852573-1852768:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1859322-1859455:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1861303-1861344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1861468-1863159:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1863269-1863449:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1871684-1871834:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1872713-1872835:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1874397-1874547:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1876180-1876376:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1877751-1877942:1:exon

Adrb2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Adrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1995231..1997099)
location: region:1995231-1997099:-1
so has part: feature:1995231-1997099:-1:exon
subclass of: SO_0000010

125340074
type: Gene
SIO_000068: ncbigene

position:1995231:-1
position: 1995231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1997099:-1
position: 1997099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1995231-1997099:-1:exon

Adrb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Adrb2
product: adrenoceptor beta 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331494.1
SIO_010081: Adrb2
subclass of: SO_0000673
so part of: Adrb2
location: complement(1995231..1997099)
location: region:1995231-1997099:-1
so has part: feature:1995231-1997099:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1995231-1997099:-1:exon

Adrb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Adrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-2 adrenergic receptor
translation: MGPPGNHSAFPLAPNGSSQAPPGRDPAEARDEAWVAGMALVMSLIVLAIVFGNVLVITAVARFERLQTVTNYFITSLACADLVMGLAVVPFGASHILMKTWTFGNFWCEFWTAIDVLCVTASIETLCVIAVDRYVAITAPFKYQSLLTKSKARGVILLVWVVSGLTSFLPIQMHWYRASHPEALACYAEDTCCDFFTNGAYAVASSIVSFYLPLVVMVFVYSRVFQVARRQLLKIDRAEGRFHHHAQQQQQQPLGPLEPDARGSGAPGAPGGRRSSKFCLKEHKALKTLGIIMGIFTLCWLPFFIVNVVHSIQDDLIPKEVYILLNWLGYVNSAFNPLIYCRSPDFRIAFQELLCLRRASVKAYGNGYSSNGHGQGKADYPGAQPSGDPPGTAGFGNRPGTVASDSVDSPRGRNWSTDDSLL
SIO_010081: Adrb2
subclass of: SO_0000673
so part of: Adrb2
location: complement(1995831..1997099)
location: region:1995831-1997099:-1
so has part: feature:1995831-1997099:-1:exon

XP_048187451.1
type: Protein
SIO_000068: ncbiprotein

position:1995831:-1
position: 1995831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1995831-1997099:-1:exon

Htr4
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Htr4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2134407..2169800
location: region:2134407-2169800:1
so has part: feature:2134407-2169800:1:exon
subclass of: SO_0000010

125340179
type: Gene
SIO_000068: ncbigene

position:2134407:1
position: 2134407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2169800:1
position: 2169800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2134407-2169800:1:exon

Htr4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Htr4
product: 5-hydroxytryptamine receptor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331627.1
SIO_010081: Htr4
subclass of: SO_0000673
so part of: Htr4
location: join(2134407..2134471,2134575..2134643,2134889..2135014,2136249..2136449,2149310..2149463,2150022..2150681,2167353..2167405,2169713..2169800)
location: region:2134407-2169800:1
so has part: feature:2134407-2134471:1:exon
so has part: feature:2134575-2134643:1:exon
so has part: feature:2134889-2135014:1:exon
so has part: feature:2136249-2136449:1:exon
so has part: feature:2149310-2149463:1:exon
so has part: feature:2150022-2150681:1:exon
so has part: feature:2167353-2167405:1:exon
so has part: feature:2169713-2169800:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2134407-2134471:1:exon

position:2134471:1
position: 2134471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2134575-2134643:1:exon

position:2134575:1
position: 2134575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2134643:1
position: 2134643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2134889-2135014:1:exon

position:2134889:1
position: 2134889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2135014:1
position: 2135014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2136249-2136449:1:exon

position:2136249:1
position: 2136249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2136449:1
position: 2136449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2149310-2149463:1:exon

position:2149310:1
position: 2149310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2149463:1
position: 2149463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2150022-2150681:1:exon

position:2150022:1
position: 2150022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2150681:1
position: 2150681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2167353-2167405:1:exon

position:2167353:1
position: 2167353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2167405:1
position: 2167405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2169713-2169800:1:exon

position:2169713:1
position: 2169713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Htr4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Htr4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 4
translation: MGILVPADAFRSSPGIAPASDGLAVVSFHDTGKHQECTQSTPGLSSEEGFGSVEKVLLLTFLSAIILMAILGNLLVMVAVCRDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDVWIYGEMFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPVRIALLLGGCWLVPMFISFLPIMQGWNNIGIVELIEQRKFNQHSNSTYCVFMVNKPYAVTCSVVAFYIPFLLMALAYYRIYVTARAHARQIRRLQRAGAGAAPEGGRGAGRGRAPPPADPHGATHRMRTETKAAKTLGVIMGCFCLCWAPFFVTNVADPFLDYAVPAQVWTAFLWLGYINSGLNPFLYAFLNKAFRRAFLSILCCDGGGRSRRPSVLLRPPAGPGSSSAAAAAAAPAPATASAATRQRLHAPAQPERQRFHRERVDSLPRIEDAAECGGRWESQCHPSEGDVSPGGRPAQ
SIO_010081: Htr4
subclass of: SO_0000673
so part of: Htr4
location: join(2134407..2134471,2134575..2134643,2134889..2135014,2136249..2136449,2149310..2149463,2150022..2150681,2167353..2167405,2169713..2169800)
location: region:2134407-2169800:1
so has part: feature:2134407-2134471:1:exon
so has part: feature:2134575-2134643:1:exon
so has part: feature:2134889-2135014:1:exon
so has part: feature:2136249-2136449:1:exon
so has part: feature:2149310-2149463:1:exon
so has part: feature:2150022-2150681:1:exon
so has part: feature:2167353-2167405:1:exon
so has part: feature:2169713-2169800:1:exon

XP_048187584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2134407-2134471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2134575-2134643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2134889-2135014:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2136249-2136449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2149310-2149463:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2150022-2150681:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2167353-2167405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2169713-2169800:1:exon

Fbxo38
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Fbxo38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2198546..2242010)
location: region:2198546-2242010:-1
so has part: feature:2198546-2242010:-1:exon
subclass of: SO_0000010

125339813
type: Gene
SIO_000068: ncbigene

position:2198546:-1
position: 2198546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2242010:-1
position: 2242010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2198546-2242010:-1:exon

Fbxo38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Fbxo38
product: F-box protein 38, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331074.1
SIO_010081: Fbxo38
subclass of: SO_0000673
so part of: Fbxo38
location: complement(join(2198546..2199416,2200248..2200361,2200641..2200744,2201301..2201446,2202566..2202732,2203346..2203448,2203610..2203710,2209311..2210048,2211619..2211798,2213070..2213189,2215403..2215613,2216454..2216596,2218207..2218377,2222522..2222652,2224300..2224393,2227324..2227461,2228741..2228878,2231924..2232089,2232289..2232452,2234034..2234167,2235074..2235257,2241917..2242010))
location: region:2198546-2242010:-1
so has part: feature:2241917-2242010:-1:exon
so has part: feature:2235074-2235257:-1:exon
so has part: feature:2234034-2234167:-1:exon
so has part: feature:2232289-2232452:-1:exon
so has part: feature:2231924-2232089:-1:exon
so has part: feature:2228741-2228878:-1:exon
so has part: feature:2227324-2227461:-1:exon
so has part: feature:2224300-2224393:-1:exon
so has part: feature:2222522-2222652:-1:exon
so has part: feature:2218207-2218377:-1:exon
so has part: feature:2216454-2216596:-1:exon
so has part: feature:2215403-2215613:-1:exon
so has part: feature:2213070-2213189:-1:exon
so has part: feature:2211619-2211798:-1:exon
so has part: feature:2209311-2210048:-1:exon
so has part: feature:2203610-2203710:-1:exon
so has part: feature:2203346-2203448:-1:exon
so has part: feature:2202566-2202732:-1:exon
so has part: feature:2201301-2201446:-1:exon
so has part: feature:2200641-2200744:-1:exon
so has part: feature:2200248-2200361:-1:exon
so has part: feature:2198546-2199416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2241917-2242010:-1:exon

position:2241917:-1
position: 2241917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2235074-2235257:-1:exon

position:2235074:-1
position: 2235074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2235257:-1
position: 2235257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2234034-2234167:-1:exon

position:2234034:-1
position: 2234034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2234167:-1
position: 2234167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2232289-2232452:-1:exon

position:2232289:-1
position: 2232289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2232452:-1
position: 2232452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2231924-2232089:-1:exon

position:2231924:-1
position: 2231924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2232089:-1
position: 2232089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2228741-2228878:-1:exon

position:2228741:-1
position: 2228741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2228878:-1
position: 2228878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2227324-2227461:-1:exon

position:2227324:-1
position: 2227324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2227461:-1
position: 2227461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2224300-2224393:-1:exon

position:2224300:-1
position: 2224300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2224393:-1
position: 2224393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2222522-2222652:-1:exon

position:2222522:-1
position: 2222522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2222652:-1
position: 2222652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2218207-2218377:-1:exon

position:2218207:-1
position: 2218207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2218377:-1
position: 2218377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2216454-2216596:-1:exon

position:2216454:-1
position: 2216454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2216596:-1
position: 2216596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2215403-2215613:-1:exon

position:2215403:-1
position: 2215403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2215613:-1
position: 2215613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2213070-2213189:-1:exon

position:2213070:-1
position: 2213070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2213189:-1
position: 2213189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2211619-2211798:-1:exon

position:2211619:-1
position: 2211619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2211798:-1
position: 2211798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2209311-2210048:-1:exon

position:2209311:-1
position: 2209311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2210048:-1
position: 2210048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2203610-2203710:-1:exon

position:2203610:-1
position: 2203610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2203710:-1
position: 2203710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2203346-2203448:-1:exon

position:2203346:-1
position: 2203346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2203448:-1
position: 2203448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2202566-2202732:-1:exon

position:2202566:-1
position: 2202566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2202732:-1
position: 2202732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2201301-2201446:-1:exon

position:2201301:-1
position: 2201301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2201446:-1
position: 2201446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2200641-2200744:-1:exon

position:2200641:-1
position: 2200641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2200744:-1
position: 2200744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2200248-2200361:-1:exon

position:2200248:-1
position: 2200248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2200361:-1
position: 2200361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2198546-2199416:-1:exon

position:2199416:-1
position: 2199416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Fbxo38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Fbxo38
product: F-box protein 38, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331075.1
SIO_010081: Fbxo38
subclass of: SO_0000673
so part of: Fbxo38
location: complement(join(2198546..2199416,2200248..2200361,2200641..2200744,2201301..2201446,2202566..2202732,2203346..2203448,2203610..2203710,2209311..2210045,2211619..2211798,2213070..2213189,2215403..2215613,2216454..2216596,2218207..2218377,2222522..2222652,2224300..2224393,2227324..2227461,2228741..2228878,2231924..2232089,2232289..2232452,2234034..2234167,2235074..2235257,2239850..2240287))
location: region:2198546-2240287:-1
so has part: feature:2239850-2240287:-1:exon
so has part: feature:2235074-2235257:-1:exon
so has part: feature:2234034-2234167:-1:exon
so has part: feature:2232289-2232452:-1:exon
so has part: feature:2231924-2232089:-1:exon
so has part: feature:2228741-2228878:-1:exon
so has part: feature:2227324-2227461:-1:exon
so has part: feature:2224300-2224393:-1:exon
so has part: feature:2222522-2222652:-1:exon
so has part: feature:2218207-2218377:-1:exon
so has part: feature:2216454-2216596:-1:exon
so has part: feature:2215403-2215613:-1:exon
so has part: feature:2213070-2213189:-1:exon
so has part: feature:2211619-2211798:-1:exon
so has part: feature:2209311-2210045:-1:exon
so has part: feature:2203610-2203710:-1:exon
so has part: feature:2203346-2203448:-1:exon
so has part: feature:2202566-2202732:-1:exon
so has part: feature:2201301-2201446:-1:exon
so has part: feature:2200641-2200744:-1:exon
so has part: feature:2200248-2200361:-1:exon
so has part: feature:2198546-2199416:-1:exon

position:2240287:-1
position: 2240287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2239850-2240287:-1:exon

position:2239850:-1
position: 2239850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2235074-2235257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2234034-2234167:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2232289-2232452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2231924-2232089:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2228741-2228878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2227324-2227461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2224300-2224393:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2222522-2222652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2218207-2218377:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2216454-2216596:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2215403-2215613:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2213070-2213189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2211619-2211798:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2209311-2210045:-1:exon

position:2210045:-1
position: 2210045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2203610-2203710:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2203346-2203448:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2202566-2202732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2201301-2201446:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2200641-2200744:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2200248-2200361:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2198546-2199416:-1:exon

Fbxo38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Fbxo38
product: F-box protein 38, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331076.1
SIO_010081: Fbxo38
subclass of: SO_0000673
so part of: Fbxo38
location: complement(join(2198546..2199416,2200248..2200361,2200641..2200744,2201301..2201446,2202566..2202732,2203346..2203448,2203610..2203710,2209536..2210048,2211619..2211798,2213070..2213189,2215403..2215613,2216454..2216596,2218207..2218377,2222522..2222652,2224300..2224393,2227324..2227461,2228741..2228878,2231924..2232089,2232289..2232452,2234034..2234167,2235074..2235257,2239850..2240287))
location: region:2198546-2240287:-1
so has part: feature:2239850-2240287:-1:exon
so has part: feature:2235074-2235257:-1:exon
so has part: feature:2234034-2234167:-1:exon
so has part: feature:2232289-2232452:-1:exon
so has part: feature:2231924-2232089:-1:exon
so has part: feature:2228741-2228878:-1:exon
so has part: feature:2227324-2227461:-1:exon
so has part: feature:2224300-2224393:-1:exon
so has part: feature:2222522-2222652:-1:exon
so has part: feature:2218207-2218377:-1:exon
so has part: feature:2216454-2216596:-1:exon
so has part: feature:2215403-2215613:-1:exon
so has part: feature:2213070-2213189:-1:exon
so has part: feature:2211619-2211798:-1:exon
so has part: feature:2209536-2210048:-1:exon
so has part: feature:2203610-2203710:-1:exon
so has part: feature:2203346-2203448:-1:exon
so has part: feature:2202566-2202732:-1:exon
so has part: feature:2201301-2201446:-1:exon
so has part: feature:2200641-2200744:-1:exon
so has part: feature:2200248-2200361:-1:exon
so has part: feature:2198546-2199416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2239850-2240287:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2235074-2235257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2234034-2234167:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2232289-2232452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2231924-2232089:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2228741-2228878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2227324-2227461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2224300-2224393:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2222522-2222652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2218207-2218377:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2216454-2216596:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2215403-2215613:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2213070-2213189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2211619-2211798:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2209536-2210048:-1:exon

position:2209536:-1
position: 2209536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2203610-2203710:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2203346-2203448:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2202566-2202732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2201301-2201446:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2200641-2200744:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2200248-2200361:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2198546-2199416:-1:exon

Fbxo38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Fbxo38
product: F-box protein 38, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331073.1
SIO_010081: Fbxo38
subclass of: SO_0000673
so part of: Fbxo38
location: complement(join(2198546..2199416,2200248..2200361,2200641..2200744,2201301..2201446,2202566..2202732,2203346..2203448,2203610..2203710,2209311..2210048,2211619..2211798,2213070..2213189,2215403..2215613,2216454..2216596,2218207..2218377,2222522..2222652,2224300..2224393,2227324..2227461,2228741..2228878,2231924..2232089,2232289..2232452,2234034..2234167,2235074..2235257,2239850..2240287))
location: region:2198546-2240287:-1
so has part: feature:2239850-2240287:-1:exon
so has part: feature:2235074-2235257:-1:exon
so has part: feature:2234034-2234167:-1:exon
so has part: feature:2232289-2232452:-1:exon
so has part: feature:2231924-2232089:-1:exon
so has part: feature:2228741-2228878:-1:exon
so has part: feature:2227324-2227461:-1:exon
so has part: feature:2224300-2224393:-1:exon
so has part: feature:2222522-2222652:-1:exon
so has part: feature:2218207-2218377:-1:exon
so has part: feature:2216454-2216596:-1:exon
so has part: feature:2215403-2215613:-1:exon
so has part: feature:2213070-2213189:-1:exon
so has part: feature:2211619-2211798:-1:exon
so has part: feature:2209311-2210048:-1:exon
so has part: feature:2203610-2203710:-1:exon
so has part: feature:2203346-2203448:-1:exon
so has part: feature:2202566-2202732:-1:exon
so has part: feature:2201301-2201446:-1:exon
so has part: feature:2200641-2200744:-1:exon
so has part: feature:2200248-2200361:-1:exon
so has part: feature:2198546-2199416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2239850-2240287:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2235074-2235257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2234034-2234167:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2232289-2232452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2231924-2232089:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2228741-2228878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2227324-2227461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2224300-2224393:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2222522-2222652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2218207-2218377:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2216454-2216596:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2215403-2215613:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2213070-2213189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2211619-2211798:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2209311-2210048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2203610-2203710:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2203346-2203448:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2202566-2202732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2201301-2201446:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2200641-2200744:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2200248-2200361:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2198546-2199416:-1:exon

Fbxo38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Fbxo38
product: F-box protein 38, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331080.1
SIO_010081: Fbxo38
subclass of: SO_0000673
so part of: Fbxo38
location: complement(join(2198546..2199416,2200248..2200361,2200641..2200744,2201301..2201446,2202566..2202732,2203346..2203448,2203610..2203710,2211619..2211798,2213070..2213189,2215403..2215613,2216454..2216596,2218207..2218377,2222522..2222652,2224300..2224393,2227324..2227461,2228741..2228878,2231924..2232089,2232289..2232452,2234034..2234167,2235074..2235257,2239850..2240286))
location: region:2198546-2240286:-1
so has part: feature:2239850-2240286:-1:exon
so has part: feature:2235074-2235257:-1:exon
so has part: feature:2234034-2234167:-1:exon
so has part: feature:2232289-2232452:-1:exon
so has part: feature:2231924-2232089:-1:exon
so has part: feature:2228741-2228878:-1:exon
so has part: feature:2227324-2227461:-1:exon
so has part: feature:2224300-2224393:-1:exon
so has part: feature:2222522-2222652:-1:exon
so has part: feature:2218207-2218377:-1:exon
so has part: feature:2216454-2216596:-1:exon
so has part: feature:2215403-2215613:-1:exon
so has part: feature:2213070-2213189:-1:exon
so has part: feature:2211619-2211798:-1:exon
so has part: feature:2203610-2203710:-1:exon
so has part: feature:2203346-2203448:-1:exon
so has part: feature:2202566-2202732:-1:exon
so has part: feature:2201301-2201446:-1:exon
so has part: feature:2200641-2200744:-1:exon
so has part: feature:2200248-2200361:-1:exon
so has part: feature:2198546-2199416:-1:exon

position:2240286:-1
position: 2240286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2239850-2240286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2235074-2235257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2234034-2234167:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2232289-2232452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2231924-2232089:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2228741-2228878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2227324-2227461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2224300-2224393:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2222522-2222652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2218207-2218377:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2216454-2216596:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2215403-2215613:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2213070-2213189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2211619-2211798:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2203610-2203710:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2203346-2203448:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2202566-2202732:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2201301-2201446:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2200641-2200744:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2200248-2200361:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2198546-2199416:-1:exon

Fbxo38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Fbxo38
product: F-box protein 38, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331077.1
SIO_010081: Fbxo38
subclass of: SO_0000673
so part of: Fbxo38
location: complement(join(2198546..2199416,2200248..2200361,2200641..2200744,2201301..2201446,2202566..2202732,2203346..2203448,2203610..2203710,2209536..2210045,2211619..2211798,2213070..2213189,2215403..2215613,2216454..2216596,2218207..2218377,2222522..2222652,2224300..2224393,2227324..2227461,2228741..2228878,2231924..2232089,2232289..2232452,2234034..2234167,2235074..2235257,2239850..2240286))
location: region:2198546-2240286:-1
so has part: feature:2239850-2240286:-1:exon
so has part: feature:2235074-2235257:-1:exon
so has part: feature:2234034-2234167:-1:exon
so has part: feature:2232289-2232452:-1:exon
so has part: feature:2231924-2232089:-1:exon
so has part: feature:2228741-2228878:-1:exon
so has part: feature:2227324-2227461:-1:exon
so has part: feature:2224300-2224393:-1:exon
so has part: feature:2222522-2222652:-1:exon
so has part: feature:2218207-2218377:-1:exon
so has part: feature:2216454-2216596:-1:exon
so has part: feature:2215403-2215613:-1:exon
so has part: feature:2213070-2213189:-1:exon
so has part: feature:2211619-2211798:-1:exon
so has part: feature:2209536-2210045:-1:exon
so has part: feature:2203610-2203710:-1:exon
so has part: feature:2203346-2203448:-1:exon
so has part: feature:2202566-2202732:-1:exon
so has part: feature:2201301-2201446:-1:exon
so has part: feature:2200641-2200744:-1:exon
so has part: feature:2200248-2200361:-1:exon
so has part: feature:2198546-2199416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2239850-2240286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2235074-2235257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2234034-2234167:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2232289-2232452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2231924-2232089:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2228741-2228878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2227324-2227461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2224300-2224393:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2222522-2222652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2218207-2218377:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2216454-2216596:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2215403-2215613:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2213070-2213189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2211619-2211798:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2209536-2210045:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2203610-2203710:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2203346-2203448:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2202566-2202732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2201301-2201446:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2200641-2200744:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2200248-2200361:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2198546-2199416:-1:exon

Fbxo38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Fbxo38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X5
translation: MGPRKKSVKTCLMNSEITEEPLSDETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKLKEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDSSFLTLLKKMPDVEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMRNCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWISDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNAQNNNANIHDNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDMVQEEGEVIAESGSDTPAHSQAAVPGDVDEEQAGPSGIQRVVKPTPITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKPGESAQSRELSEVAKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFSGPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFPEASRTEEDLKKYPKYPWGREIYTLEGVVDGAPYSLISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQLSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: Fbxo38
subclass of: SO_0000673
so part of: Fbxo38
location: complement(join(2199238..2199416,2200248..2200361,2200641..2200744,2201301..2201446,2202566..2202732,2203346..2203448,2203610..2203710,2211619..2211798,2213070..2213189,2215403..2215613,2216454..2216596,2218207..2218377,2222522..2222652,2224300..2224393,2227324..2227461,2228741..2228878,2231924..2232089,2232289..2232452,2234034..2234167,2235074..2235201))
location: region:2199238-2235201:-1
so has part: feature:2235074-2235201:-1:exon
so has part: feature:2234034-2234167:-1:exon
so has part: feature:2232289-2232452:-1:exon
so has part: feature:2231924-2232089:-1:exon
so has part: feature:2228741-2228878:-1:exon
so has part: feature:2227324-2227461:-1:exon
so has part: feature:2224300-2224393:-1:exon
so has part: feature:2222522-2222652:-1:exon
so has part: feature:2218207-2218377:-1:exon
so has part: feature:2216454-2216596:-1:exon
so has part: feature:2215403-2215613:-1:exon
so has part: feature:2213070-2213189:-1:exon
so has part: feature:2211619-2211798:-1:exon
so has part: feature:2203610-2203710:-1:exon
so has part: feature:2203346-2203448:-1:exon
so has part: feature:2202566-2202732:-1:exon
so has part: feature:2201301-2201446:-1:exon
so has part: feature:2200641-2200744:-1:exon
so has part: feature:2200248-2200361:-1:exon
so has part: feature:2199238-2199416:-1:exon

XP_048187037.1
type: Protein
SIO_000068: ncbiprotein

position:2199238:-1
position: 2199238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2235201:-1
position: 2235201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2235074-2235201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2234034-2234167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2232289-2232452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2231924-2232089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2228741-2228878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227324-2227461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2224300-2224393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2222522-2222652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2218207-2218377:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2216454-2216596:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2215403-2215613:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2213070-2213189:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2211619-2211798:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2203610-2203710:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2203346-2203448:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2202566-2202732:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2201301-2201446:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2200641-2200744:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2200248-2200361:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2199238-2199416:-1:exon

Fbxo38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Fbxo38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X4
translation: MGPRKKSVKTCLMNSEITEEPLSDETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKLKEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDSSFLTLLKKMPDVEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMRNCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWISDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNAQNNNANIHDNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDMVQEEGEVIAESGSDTPAHSQAAVPGDVDEEQAGPSGIQRVVKPTPITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKPGESAQSRELSVSGKGKTPLRKRYTSHQMGQSKPFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTAASTVGNSSSHSTASQSPDFVRTVTSSGSSEPSPTEVDVSRQCVCSPGGSEDSEVVEEGDAESSVCPRCCCHRPQEPQRRTSRCSDEERPSTSRASVVNGPDEVAKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFSGPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFPEASRTEEDLKKYPKYPWGREIYTLEGVVDGAPYSLISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQLSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: Fbxo38
subclass of: SO_0000673
so part of: Fbxo38
location: complement(join(2199238..2199416,2200248..2200361,2200641..2200744,2201301..2201446,2202566..2202732,2203346..2203448,2203610..2203710,2209536..2210045,2211619..2211798,2213070..2213189,2215403..2215613,2216454..2216596,2218207..2218377,2222522..2222652,2224300..2224393,2227324..2227461,2228741..2228878,2231924..2232089,2232289..2232452,2234034..2234167,2235074..2235201))
location: region:2199238-2235201:-1
so has part: feature:2235074-2235201:-1:exon
so has part: feature:2234034-2234167:-1:exon
so has part: feature:2232289-2232452:-1:exon
so has part: feature:2231924-2232089:-1:exon
so has part: feature:2228741-2228878:-1:exon
so has part: feature:2227324-2227461:-1:exon
so has part: feature:2224300-2224393:-1:exon
so has part: feature:2222522-2222652:-1:exon
so has part: feature:2218207-2218377:-1:exon
so has part: feature:2216454-2216596:-1:exon
so has part: feature:2215403-2215613:-1:exon
so has part: feature:2213070-2213189:-1:exon
so has part: feature:2211619-2211798:-1:exon
so has part: feature:2209536-2210045:-1:exon
so has part: feature:2203610-2203710:-1:exon
so has part: feature:2203346-2203448:-1:exon
so has part: feature:2202566-2202732:-1:exon
so has part: feature:2201301-2201446:-1:exon
so has part: feature:2200641-2200744:-1:exon
so has part: feature:2200248-2200361:-1:exon
so has part: feature:2199238-2199416:-1:exon

XP_048187034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2235074-2235201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2234034-2234167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2232289-2232452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2231924-2232089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2228741-2228878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227324-2227461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2224300-2224393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2222522-2222652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2218207-2218377:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2216454-2216596:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2215403-2215613:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2213070-2213189:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2211619-2211798:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2209536-2210045:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2203610-2203710:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2203346-2203448:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2202566-2202732:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2201301-2201446:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2200641-2200744:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2200248-2200361:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2199238-2199416:-1:exon

Fbxo38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Fbxo38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X2
translation: MGPRKKSVKTCLMNSEITEEPLSDETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKLKEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDSSFLTLLKKMPDVEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMRNCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWISDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNAQNNNANIHDNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDMVQEEGEVIAESGSDTPAHSQAAVPGDVDEEQAGPSGIQRVVKPTPITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKPGESAQSRELSVSGKGKTPLRKRYTSHQMGQSKPFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTAASTVGNSSSHSTASQSPDFVRTVTSSGSSEPSPTEVDVSRQCVCSPGGSEDSEVVEEGDAESSVCPRCCCHRPQEPQRRTSRCSDEERPSTSRASVVNGPDGTRSAFSFRTLPQGGSSGPAQDERTNGSGPGAAGEDRRGSPQPESCDVQSREDYPRRPLTRARSRLSHVPLVPESEVAKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFSGPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFPEASRTEEDLKKYPKYPWGREIYTLEGVVDGAPYSLISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQLSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: Fbxo38
subclass of: SO_0000673
so part of: Fbxo38
location: complement(join(2199238..2199416,2200248..2200361,2200641..2200744,2201301..2201446,2202566..2202732,2203346..2203448,2203610..2203710,2209311..2210045,2211619..2211798,2213070..2213189,2215403..2215613,2216454..2216596,2218207..2218377,2222522..2222652,2224300..2224393,2227324..2227461,2228741..2228878,2231924..2232089,2232289..2232452,2234034..2234167,2235074..2235201))
location: region:2199238-2235201:-1
so has part: feature:2235074-2235201:-1:exon
so has part: feature:2234034-2234167:-1:exon
so has part: feature:2232289-2232452:-1:exon
so has part: feature:2231924-2232089:-1:exon
so has part: feature:2228741-2228878:-1:exon
so has part: feature:2227324-2227461:-1:exon
so has part: feature:2224300-2224393:-1:exon
so has part: feature:2222522-2222652:-1:exon
so has part: feature:2218207-2218377:-1:exon
so has part: feature:2216454-2216596:-1:exon
so has part: feature:2215403-2215613:-1:exon
so has part: feature:2213070-2213189:-1:exon
so has part: feature:2211619-2211798:-1:exon
so has part: feature:2209311-2210045:-1:exon
so has part: feature:2203610-2203710:-1:exon
so has part: feature:2203346-2203448:-1:exon
so has part: feature:2202566-2202732:-1:exon
so has part: feature:2201301-2201446:-1:exon
so has part: feature:2200641-2200744:-1:exon
so has part: feature:2200248-2200361:-1:exon
so has part: feature:2199238-2199416:-1:exon

XP_048187032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2235074-2235201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2234034-2234167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2232289-2232452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2231924-2232089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2228741-2228878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227324-2227461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2224300-2224393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2222522-2222652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2218207-2218377:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2216454-2216596:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2215403-2215613:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2213070-2213189:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2211619-2211798:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2209311-2210045:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2203610-2203710:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2203346-2203448:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2202566-2202732:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2201301-2201446:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2200641-2200744:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2200248-2200361:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2199238-2199416:-1:exon

Fbxo38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Fbxo38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X3
translation: MGPRKKSVKTCLMNSEITEEPLSDETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKLKEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDSSFLTLLKKMPDVEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMRNCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWISDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNAQNNNANIHDNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDMVQEEGEVIAESGSDTPAHSQAAVPGDVDEEQAGPSGIQRVVKPTPITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKPGESAQSRELSAVSGKGKTPLRKRYTSHQMGQSKPFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTAASTVGNSSSHSTASQSPDFVRTVTSSGSSEPSPTEVDVSRQCVCSPGGSEDSEVVEEGDAESSVCPRCCCHRPQEPQRRTSRCSDEERPSTSRASVVNGPDEVAKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFSGPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFPEASRTEEDLKKYPKYPWGREIYTLEGVVDGAPYSLISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQLSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: Fbxo38
subclass of: SO_0000673
so part of: Fbxo38
location: complement(join(2199238..2199416,2200248..2200361,2200641..2200744,2201301..2201446,2202566..2202732,2203346..2203448,2203610..2203710,2209536..2210048,2211619..2211798,2213070..2213189,2215403..2215613,2216454..2216596,2218207..2218377,2222522..2222652,2224300..2224393,2227324..2227461,2228741..2228878,2231924..2232089,2232289..2232452,2234034..2234167,2235074..2235201))
location: region:2199238-2235201:-1
so has part: feature:2235074-2235201:-1:exon
so has part: feature:2234034-2234167:-1:exon
so has part: feature:2232289-2232452:-1:exon
so has part: feature:2231924-2232089:-1:exon
so has part: feature:2228741-2228878:-1:exon
so has part: feature:2227324-2227461:-1:exon
so has part: feature:2224300-2224393:-1:exon
so has part: feature:2222522-2222652:-1:exon
so has part: feature:2218207-2218377:-1:exon
so has part: feature:2216454-2216596:-1:exon
so has part: feature:2215403-2215613:-1:exon
so has part: feature:2213070-2213189:-1:exon
so has part: feature:2211619-2211798:-1:exon
so has part: feature:2209536-2210048:-1:exon
so has part: feature:2203610-2203710:-1:exon
so has part: feature:2203346-2203448:-1:exon
so has part: feature:2202566-2202732:-1:exon
so has part: feature:2201301-2201446:-1:exon
so has part: feature:2200641-2200744:-1:exon
so has part: feature:2200248-2200361:-1:exon
so has part: feature:2199238-2199416:-1:exon

XP_048187033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2235074-2235201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2234034-2234167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2232289-2232452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2231924-2232089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2228741-2228878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227324-2227461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2224300-2224393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2222522-2222652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2218207-2218377:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2216454-2216596:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2215403-2215613:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2213070-2213189:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2211619-2211798:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2209536-2210048:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2203610-2203710:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2203346-2203448:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2202566-2202732:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2201301-2201446:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2200641-2200744:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2200248-2200361:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2199238-2199416:-1:exon

Fbxo38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Fbxo38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X1
translation: MGPRKKSVKTCLMNSEITEEPLSDETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKLKEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDSSFLTLLKKMPDVEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMRNCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWISDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNAQNNNANIHDNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDMVQEEGEVIAESGSDTPAHSQAAVPGDVDEEQAGPSGIQRVVKPTPITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKPGESAQSRELSAVSGKGKTPLRKRYTSHQMGQSKPFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTAASTVGNSSSHSTASQSPDFVRTVTSSGSSEPSPTEVDVSRQCVCSPGGSEDSEVVEEGDAESSVCPRCCCHRPQEPQRRTSRCSDEERPSTSRASVVNGPDGTRSAFSFRTLPQGGSSGPAQDERTNGSGPGAAGEDRRGSPQPESCDVQSREDYPRRPLTRARSRLSHVPLVPESEVAKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFSGPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFPEASRTEEDLKKYPKYPWGREIYTLEGVVDGAPYSLISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQLSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: Fbxo38
subclass of: SO_0000673
so part of: Fbxo38
location: complement(join(2199238..2199416,2200248..2200361,2200641..2200744,2201301..2201446,2202566..2202732,2203346..2203448,2203610..2203710,2209311..2210048,2211619..2211798,2213070..2213189,2215403..2215613,2216454..2216596,2218207..2218377,2222522..2222652,2224300..2224393,2227324..2227461,2228741..2228878,2231924..2232089,2232289..2232452,2234034..2234167,2235074..2235201))
location: region:2199238-2235201:-1
so has part: feature:2235074-2235201:-1:exon
so has part: feature:2234034-2234167:-1:exon
so has part: feature:2232289-2232452:-1:exon
so has part: feature:2231924-2232089:-1:exon
so has part: feature:2228741-2228878:-1:exon
so has part: feature:2227324-2227461:-1:exon
so has part: feature:2224300-2224393:-1:exon
so has part: feature:2222522-2222652:-1:exon
so has part: feature:2218207-2218377:-1:exon
so has part: feature:2216454-2216596:-1:exon
so has part: feature:2215403-2215613:-1:exon
so has part: feature:2213070-2213189:-1:exon
so has part: feature:2211619-2211798:-1:exon
so has part: feature:2209311-2210048:-1:exon
so has part: feature:2203610-2203710:-1:exon
so has part: feature:2203346-2203448:-1:exon
so has part: feature:2202566-2202732:-1:exon
so has part: feature:2201301-2201446:-1:exon
so has part: feature:2200641-2200744:-1:exon
so has part: feature:2200248-2200361:-1:exon
so has part: feature:2199238-2199416:-1:exon

XP_048187030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2235074-2235201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2234034-2234167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2232289-2232452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2231924-2232089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2228741-2228878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227324-2227461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2224300-2224393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2222522-2222652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2218207-2218377:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2216454-2216596:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2215403-2215613:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2213070-2213189:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2211619-2211798:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2209311-2210048:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2203610-2203710:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2203346-2203448:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2202566-2202732:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2201301-2201446:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2200641-2200744:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2200248-2200361:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2199238-2199416:-1:exon

Fbxo38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Fbxo38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X1
translation: MGPRKKSVKTCLMNSEITEEPLSDETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKLKEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDSSFLTLLKKMPDVEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMRNCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWISDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNAQNNNANIHDNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDMVQEEGEVIAESGSDTPAHSQAAVPGDVDEEQAGPSGIQRVVKPTPITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKPGESAQSRELSAVSGKGKTPLRKRYTSHQMGQSKPFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTAASTVGNSSSHSTASQSPDFVRTVTSSGSSEPSPTEVDVSRQCVCSPGGSEDSEVVEEGDAESSVCPRCCCHRPQEPQRRTSRCSDEERPSTSRASVVNGPDGTRSAFSFRTLPQGGSSGPAQDERTNGSGPGAAGEDRRGSPQPESCDVQSREDYPRRPLTRARSRLSHVPLVPESEVAKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFSGPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFPEASRTEEDLKKYPKYPWGREIYTLEGVVDGAPYSLISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQLSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: Fbxo38
subclass of: SO_0000673
so part of: Fbxo38
location: complement(join(2199238..2199416,2200248..2200361,2200641..2200744,2201301..2201446,2202566..2202732,2203346..2203448,2203610..2203710,2209311..2210048,2211619..2211798,2213070..2213189,2215403..2215613,2216454..2216596,2218207..2218377,2222522..2222652,2224300..2224393,2227324..2227461,2228741..2228878,2231924..2232089,2232289..2232452,2234034..2234167,2235074..2235201))
location: region:2199238-2235201:-1
so has part: feature:2235074-2235201:-1:exon
so has part: feature:2234034-2234167:-1:exon
so has part: feature:2232289-2232452:-1:exon
so has part: feature:2231924-2232089:-1:exon
so has part: feature:2228741-2228878:-1:exon
so has part: feature:2227324-2227461:-1:exon
so has part: feature:2224300-2224393:-1:exon
so has part: feature:2222522-2222652:-1:exon
so has part: feature:2218207-2218377:-1:exon
so has part: feature:2216454-2216596:-1:exon
so has part: feature:2215403-2215613:-1:exon
so has part: feature:2213070-2213189:-1:exon
so has part: feature:2211619-2211798:-1:exon
so has part: feature:2209311-2210048:-1:exon
so has part: feature:2203610-2203710:-1:exon
so has part: feature:2203346-2203448:-1:exon
so has part: feature:2202566-2202732:-1:exon
so has part: feature:2201301-2201446:-1:exon
so has part: feature:2200641-2200744:-1:exon
so has part: feature:2200248-2200361:-1:exon
so has part: feature:2199238-2199416:-1:exon

XP_048187031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2235074-2235201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2234034-2234167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2232289-2232452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2231924-2232089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2228741-2228878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227324-2227461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2224300-2224393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2222522-2222652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2218207-2218377:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2216454-2216596:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2215403-2215613:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2213070-2213189:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2211619-2211798:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2209311-2210048:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2203610-2203710:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2203346-2203448:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2202566-2202732:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2201301-2201446:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2200641-2200744:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2200248-2200361:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2199238-2199416:-1:exon

LOC125340180
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125340180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2252438..2256031)
location: region:2252438-2256031:-1
so has part: feature:2252438-2256031:-1:exon
subclass of: SO_0000010

125340180
type: Gene
SIO_000068: ncbigene

position:2252438:-1
position: 2252438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2256031:-1
position: 2256031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2252438-2256031:-1:exon

LOC125340180
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125340180
product: serine protease inhibitor Kazal-type 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_048331628.1
SIO_010081: LOC125340180
subclass of: SO_0000673
so part of: LOC125340180
location: complement(join(2252438..2252483,2253280..2253404,2254002..2254024,2255971..2256031))
location: region:2252438-2256031:-1
so has part: feature:2255971-2256031:-1:exon
so has part: feature:2254002-2254024:-1:exon
so has part: feature:2253280-2253404:-1:exon
so has part: feature:2252438-2252483:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2255971-2256031:-1:exon

position:2255971:-1
position: 2255971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2254002-2254024:-1:exon

position:2254002:-1
position: 2254002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2254024:-1
position: 2254024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2253280-2253404:-1:exon

position:2253280:-1
position: 2253280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2253404:-1
position: 2253404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2252438-2252483:-1:exon

position:2252483:-1
position: 2252483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125340180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125340180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease inhibitor Kazal-type 7-like
translation: MKTFGGLLLLCAVAHFCSGSEVTNDPSMVDCSVYKKYPVVAIPCPITYLPVCGTNYITYGNSCLLCAEVLKSGGKVQLLHEGQC
SIO_010081: LOC125340180
subclass of: SO_0000673
so part of: LOC125340180
location: complement(join(2252438..2252483,2253280..2253404,2254002..2254024,2255971..2256031))
location: region:2252438-2256031:-1
so has part: feature:2255971-2256031:-1:exon
so has part: feature:2254002-2254024:-1:exon
so has part: feature:2253280-2253404:-1:exon
so has part: feature:2252438-2252483:-1:exon

XP_048187585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2255971-2256031:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2254002-2254024:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2253280-2253404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2252438-2252483:-1:exon

LOC125340236
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125340236
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2287314..2287420)
location: region:2287314-2287420:-1
so has part: feature:2287314-2287420:-1:exon
subclass of: SO_0000623

125340236
type: Gene
SIO_000068: ncbigene

position:2287314:-1
position: 2287314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2287420:-1
position: 2287420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2287314-2287420:-1:exon

LOC125340236
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snRNA
gene: LOC125340236
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007208719.1
SIO_010081: LOC125340236
subclass of: SO_0000673
so part of: LOC125340236
location: complement(2287314..2287420)
location: region:2287314-2287420:-1
so has part: feature:2287314-2287420:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2287314-2287420:-1:exon

LOC125340238
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125340238
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2317224..2317330)
location: region:2317224-2317330:-1
so has part: feature:2317224-2317330:-1:exon
subclass of: SO_0000623

125340238
type: Gene
SIO_000068: ncbigene

position:2317224:-1
position: 2317224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2317330:-1
position: 2317330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2317224-2317330:-1:exon

LOC125340238
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snRNA
gene: LOC125340238
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007208721.1
SIO_010081: LOC125340238
subclass of: SO_0000673
so part of: LOC125340238
location: complement(2317224..2317330)
location: region:2317224-2317330:-1
so has part: feature:2317224-2317330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2317224-2317330:-1:exon

LOC125340079
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125340079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2342286..2354143)
location: region:2342286-2354143:-1
so has part: feature:2342286-2354143:-1:exon
subclass of: SO_0000010

125340079
type: Gene
SIO_000068: ncbigene

position:2342286:-1
position: 2342286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2354143:-1
position: 2354143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2342286-2354143:-1:exon

LOC125340079
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125340079
product: serine protease inhibitor Kazal-type 6-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_048331499.1
SIO_010081: LOC125340079
subclass of: SO_0000673
so part of: LOC125340079
location: complement(join(2342286..2342331,2344424..2344539,2352279..2352301,2354086..2354143))
location: region:2342286-2354143:-1
so has part: feature:2354086-2354143:-1:exon
so has part: feature:2352279-2352301:-1:exon
so has part: feature:2344424-2344539:-1:exon
so has part: feature:2342286-2342331:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2354086-2354143:-1:exon

position:2354086:-1
position: 2354086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2352279-2352301:-1:exon

position:2352279:-1
position: 2352279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2352301:-1
position: 2352301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2344424-2344539:-1:exon

position:2344424:-1
position: 2344424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2344539:-1
position: 2344539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2342286-2342331:-1:exon

position:2342331:-1
position: 2342331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125340079
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125340079
product: serine protease inhibitor Kazal-type 6-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_048331498.1
SIO_010081: LOC125340079
subclass of: SO_0000673
so part of: LOC125340079
location: complement(join(2342286..2342331,2344424..2344539,2347031..2347123,2352279..2352301,2354086..2354143))
location: region:2342286-2354143:-1
so has part: feature:2354086-2354143:-1:exon
so has part: feature:2352279-2352301:-1:exon
so has part: feature:2347031-2347123:-1:exon
so has part: feature:2344424-2344539:-1:exon
so has part: feature:2342286-2342331:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2354086-2354143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2352279-2352301:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2347031-2347123:-1:exon

position:2347031:-1
position: 2347031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2347123:-1
position: 2347123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2344424-2344539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2342286-2342331:-1:exon

LOC125340079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125340079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease inhibitor Kazal-type 6-like isoform X2
translation: MKIAGVFVLLSLALFCMFSGVFSQGGQINCDEFRDPKIFCTRESNPHCGSDGQTYGNKCAFCKAMAKSNGKINLKHHGSC
SIO_010081: LOC125340079
subclass of: SO_0000673
so part of: LOC125340079
location: complement(join(2342286..2342331,2344424..2344539,2352279..2352301,2354086..2354143))
location: region:2342286-2354143:-1
so has part: feature:2354086-2354143:-1:exon
so has part: feature:2352279-2352301:-1:exon
so has part: feature:2344424-2344539:-1:exon
so has part: feature:2342286-2342331:-1:exon

XP_048187456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2354086-2354143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2352279-2352301:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2344424-2344539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2342286-2342331:-1:exon

LOC125340079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125340079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease inhibitor Kazal-type 6-like isoform X1
translation: MKIAGVFVLLSLALFCMFSGVFSQGGQDERGWITRSEARRPGRGGTPGRGGLRNRLFQINCDEFRDPKIFCTRESNPHCGSDGQTYGNKCAFCKAMAKSNGKINLKHHGSC
SIO_010081: LOC125340079
subclass of: SO_0000673
so part of: LOC125340079
location: complement(join(2342286..2342331,2344424..2344539,2347031..2347123,2352279..2352301,2354086..2354143))
location: region:2342286-2354143:-1
so has part: feature:2354086-2354143:-1:exon
so has part: feature:2352279-2352301:-1:exon
so has part: feature:2347031-2347123:-1:exon
so has part: feature:2344424-2344539:-1:exon
so has part: feature:2342286-2342331:-1:exon

XP_048187455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2354086-2354143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2352279-2352301:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2347031-2347123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2344424-2344539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2342286-2342331:-1:exon

Spink5
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Spink5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2370897..2423527)
location: region:2370897-2423527:-1
so has part: feature:2370897-2423527:-1:exon
subclass of: SO_0000010

125340181
type: Gene
SIO_000068: ncbigene

position:2370897:-1
position: 2370897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2423527:-1
position: 2423527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2370897-2423527:-1:exon

Spink5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Spink5
product: serine peptidase inhibitor Kazal type 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331629.1
SIO_010081: Spink5
subclass of: SO_0000673
so part of: Spink5
location: complement(join(2370897..2371050,2373264..2373394,2375199..2375301,2376239..2376333,2376927..2377104,2377779..2377906,2379935..2380031,2380198..2380325,2381324..2381390,2382689..2382816,2384332..2384419,2385800..2385927,2386875..2386929,2387825..2387952,2388490..2388577,2389210..2389337,2389983..2390031,2392385..2392512,2393035..2393116,2393860..2393987,2394699..2394783,2396249..2396376,2398388..2398475,2399344..2399471,2402712..2402778,2405395..2405522,2406202..2406265,2408754..2408881,2416221..2416293,2417744..2417871,2422287..2422312,2423473..2423527))
location: region:2370897-2423527:-1
so has part: feature:2423473-2423527:-1:exon
so has part: feature:2422287-2422312:-1:exon
so has part: feature:2417744-2417871:-1:exon
so has part: feature:2416221-2416293:-1:exon
so has part: feature:2408754-2408881:-1:exon
so has part: feature:2406202-2406265:-1:exon
so has part: feature:2405395-2405522:-1:exon
so has part: feature:2402712-2402778:-1:exon
so has part: feature:2399344-2399471:-1:exon
so has part: feature:2398388-2398475:-1:exon
so has part: feature:2396249-2396376:-1:exon
so has part: feature:2394699-2394783:-1:exon
so has part: feature:2393860-2393987:-1:exon
so has part: feature:2393035-2393116:-1:exon
so has part: feature:2392385-2392512:-1:exon
so has part: feature:2389983-2390031:-1:exon
so has part: feature:2389210-2389337:-1:exon
so has part: feature:2388490-2388577:-1:exon
so has part: feature:2387825-2387952:-1:exon
so has part: feature:2386875-2386929:-1:exon
so has part: feature:2385800-2385927:-1:exon
so has part: feature:2384332-2384419:-1:exon
so has part: feature:2382689-2382816:-1:exon
so has part: feature:2381324-2381390:-1:exon
so has part: feature:2380198-2380325:-1:exon
so has part: feature:2379935-2380031:-1:exon
so has part: feature:2377779-2377906:-1:exon
so has part: feature:2376927-2377104:-1:exon
so has part: feature:2376239-2376333:-1:exon
so has part: feature:2375199-2375301:-1:exon
so has part: feature:2373264-2373394:-1:exon
so has part: feature:2370897-2371050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2423473-2423527:-1:exon

position:2423473:-1
position: 2423473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2422287-2422312:-1:exon

position:2422287:-1
position: 2422287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2422312:-1
position: 2422312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2417744-2417871:-1:exon

position:2417744:-1
position: 2417744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2417871:-1
position: 2417871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2416221-2416293:-1:exon

position:2416221:-1
position: 2416221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2416293:-1
position: 2416293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2408754-2408881:-1:exon

position:2408754:-1
position: 2408754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2408881:-1
position: 2408881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2406202-2406265:-1:exon

position:2406202:-1
position: 2406202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2406265:-1
position: 2406265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2405395-2405522:-1:exon

position:2405395:-1
position: 2405395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2405522:-1
position: 2405522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2402712-2402778:-1:exon

position:2402712:-1
position: 2402712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2402778:-1
position: 2402778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2399344-2399471:-1:exon

position:2399344:-1
position: 2399344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2399471:-1
position: 2399471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2398388-2398475:-1:exon

position:2398388:-1
position: 2398388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2398475:-1
position: 2398475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2396249-2396376:-1:exon

position:2396249:-1
position: 2396249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2396376:-1
position: 2396376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2394699-2394783:-1:exon

position:2394699:-1
position: 2394699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2394783:-1
position: 2394783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2393860-2393987:-1:exon

position:2393860:-1
position: 2393860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2393987:-1
position: 2393987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2393035-2393116:-1:exon

position:2393035:-1
position: 2393035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2393116:-1
position: 2393116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2392385-2392512:-1:exon

position:2392385:-1
position: 2392385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392512:-1
position: 2392512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2389983-2390031:-1:exon

position:2389983:-1
position: 2389983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390031:-1
position: 2390031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2389210-2389337:-1:exon

position:2389210:-1
position: 2389210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2389337:-1
position: 2389337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2388490-2388577:-1:exon

position:2388490:-1
position: 2388490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2388577:-1
position: 2388577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2387825-2387952:-1:exon

position:2387825:-1
position: 2387825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2387952:-1
position: 2387952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2386875-2386929:-1:exon

position:2386875:-1
position: 2386875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2386929:-1
position: 2386929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2385800-2385927:-1:exon

position:2385800:-1
position: 2385800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2385927:-1
position: 2385927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2384332-2384419:-1:exon

position:2384332:-1
position: 2384332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2384419:-1
position: 2384419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2382689-2382816:-1:exon

position:2382689:-1
position: 2382689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2382816:-1
position: 2382816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2381324-2381390:-1:exon

position:2381324:-1
position: 2381324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2381390:-1
position: 2381390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2380198-2380325:-1:exon

position:2380198:-1
position: 2380198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2380325:-1
position: 2380325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2379935-2380031:-1:exon

position:2379935:-1
position: 2379935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2380031:-1
position: 2380031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2377779-2377906:-1:exon

position:2377779:-1
position: 2377779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2377906:-1
position: 2377906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2376927-2377104:-1:exon

position:2376927:-1
position: 2376927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2377104:-1
position: 2377104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2376239-2376333:-1:exon

position:2376239:-1
position: 2376239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2376333:-1
position: 2376333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2375199-2375301:-1:exon

position:2375199:-1
position: 2375199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2375301:-1
position: 2375301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2373264-2373394:-1:exon

position:2373264:-1
position: 2373264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2373394:-1
position: 2373394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2370897-2371050:-1:exon

position:2371050:-1
position: 2371050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Spink5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Spink5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease inhibitor Kazal-type 5
translation: MKAATVPVLLTLALCLIKDAVSEDANQDACNEFQALMKNGKLFCPQDKILFQSPEGITLINKCATCKLTLEKATKSQRRARHLARATRDTAPAKLNCNEFKKDGQDGEFVCTDAAAAVCGTDGKTYRSRCELCAEKAKSGSQIDIKREGECEGGNAEQDVCSAFRAYVKDGRLGCTRENDPIRGPDGRTHGNKCAMCAELFLKEAQENAKQGGENRIRRDAERELCKEFEGQVRNGRLPCTRESDPVRGPDGRMHDNKCSLCAEIFLRQFSEEKSQAGENLTKDEEKVKVKRETEKLCSEFQGRAKNGMLFCTRESDPVRGPDGKMHDNTCSMCQAFFIAEAEEKKKMEAQARNRRGAGRRTPSYAELCQEYRQIVRNGKLPCTRENDPIQGPDGKMHGNTCSMCEAFFQAEEKAKKKKESESRNKRQSKNTTSFEELCSGYRNSRRNGQLVCTRENDPIQGPDGKMHGNTCSMCDVFFKQEERAKAKAKRDAAKETCNEFRDHVREGMLICTRENDPVPGPDGKMHVNKCAMCASLFQLEEEEKKNSEKEEKETAETEKVKREAVQELCSEYRRHVRNGRLPCTRENDPIEGLDGKIHGNTCSMCEAFFLQEAKEKAESRARRGADQDTCNEFRSLLQDGNLYCTRENDPVRGPDGKTHGNKCAMCKSVFKKEDEERKRKEEENQRNAAGSHGGGGKAKDQCAEFREHMKNGKLSCTRESDPVRGADGKSYNNKCAMCKELLQREIEEKNKNSGSRTNGTGSGKDVCDQFRSQMKNGNLLCTRESDPVRGPDGKTHVNKCSMCKNKLEREAAEKKKKEDEAKRTTGERSKNKEVTHVTRDVCVEFRSKQRDGKLVCTRENDPVRGPYGKMHVNKCAMCQSLFQREADERKKDDGERKKDAEGSSARPSNDAKVTQAPCPLPSPGGRHEFASRNTAFAPMVADACGACTGESRPVRGADGTVYRNACYRCRAVLQQEALERAKLQGKPSHSRASEEQQSRAESSIASLNSDMCKHYQILPRMGYICPKVLKYVCGDDGQTYDNPCMLCHENLMRQANVHIRSEGKCEEAKAAEPALAAAASVSSPASTVLGLERVGSASVPL
SIO_010081: Spink5
subclass of: SO_0000673
so part of: Spink5
location: complement(join(2370897..2371050,2373264..2373394,2375199..2375301,2376239..2376333,2376927..2377104,2377779..2377906,2379935..2380031,2380198..2380325,2381324..2381390,2382689..2382816,2384332..2384419,2385800..2385927,2386875..2386929,2387825..2387952,2388490..2388577,2389210..2389337,2389983..2390031,2392385..2392512,2393035..2393116,2393860..2393987,2394699..2394783,2396249..2396376,2398388..2398475,2399344..2399471,2402712..2402778,2405395..2405522,2406202..2406265,2408754..2408881,2416221..2416293,2417744..2417871,2422287..2422312,2423473..2423527))
location: region:2370897-2423527:-1
so has part: feature:2423473-2423527:-1:exon
so has part: feature:2422287-2422312:-1:exon
so has part: feature:2417744-2417871:-1:exon
so has part: feature:2416221-2416293:-1:exon
so has part: feature:2408754-2408881:-1:exon
so has part: feature:2406202-2406265:-1:exon
so has part: feature:2405395-2405522:-1:exon
so has part: feature:2402712-2402778:-1:exon
so has part: feature:2399344-2399471:-1:exon
so has part: feature:2398388-2398475:-1:exon
so has part: feature:2396249-2396376:-1:exon
so has part: feature:2394699-2394783:-1:exon
so has part: feature:2393860-2393987:-1:exon
so has part: feature:2393035-2393116:-1:exon
so has part: feature:2392385-2392512:-1:exon
so has part: feature:2389983-2390031:-1:exon
so has part: feature:2389210-2389337:-1:exon
so has part: feature:2388490-2388577:-1:exon
so has part: feature:2387825-2387952:-1:exon
so has part: feature:2386875-2386929:-1:exon
so has part: feature:2385800-2385927:-1:exon
so has part: feature:2384332-2384419:-1:exon
so has part: feature:2382689-2382816:-1:exon
so has part: feature:2381324-2381390:-1:exon
so has part: feature:2380198-2380325:-1:exon
so has part: feature:2379935-2380031:-1:exon
so has part: feature:2377779-2377906:-1:exon
so has part: feature:2376927-2377104:-1:exon
so has part: feature:2376239-2376333:-1:exon
so has part: feature:2375199-2375301:-1:exon
so has part: feature:2373264-2373394:-1:exon
so has part: feature:2370897-2371050:-1:exon

XP_048187586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2423473-2423527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2422287-2422312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2417744-2417871:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2416221-2416293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2408754-2408881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2406202-2406265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2405395-2405522:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2402712-2402778:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2399344-2399471:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2398388-2398475:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2396249-2396376:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2394699-2394783:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2393860-2393987:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2393035-2393116:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2392385-2392512:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2389983-2390031:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2389210-2389337:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2388490-2388577:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2387825-2387952:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2386875-2386929:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2385800-2385927:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2384332-2384419:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2382689-2382816:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2381324-2381390:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2380198-2380325:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2379935-2380031:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2377779-2377906:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2376927-2377104:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2376239-2376333:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2375199-2375301:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2373264-2373394:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2370897-2371050:-1:exon

C22H5orf46
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: C22H5orf46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2492978..2503964
location: region:2492978-2503964:1
so has part: feature:2492978-2503964:1:exon
subclass of: SO_0000010

125340183
type: Gene
SIO_000068: ncbigene

position:2492978:1
position: 2492978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2503964:1
position: 2503964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2492978-2503964:1:exon

C22H5orf46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: C22H5orf46
product: chromosome 22 C5orf46 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_048331630.1
SIO_010081: C22H5orf46
subclass of: SO_0000673
so part of: C22H5orf46
location: join(2492978..2493047,2499118..2499261,2503834..2503964)
location: region:2492978-2503964:1
so has part: feature:2492978-2493047:1:exon
so has part: feature:2499118-2499261:1:exon
so has part: feature:2503834-2503964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2492978-2493047:1:exon

position:2493047:1
position: 2493047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2499118-2499261:1:exon

position:2499118:1
position: 2499118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2499261:1
position: 2499261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2503834-2503964:1:exon

position:2503834:1
position: 2503834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C22H5orf46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: C22H5orf46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C5orf46 homolog
translation: MAVSGLRQTIALGLLVLILTCHAEDKPSDNSEDKQDNKPDDSGKDQDFPKFLSILGTEIIENALDFVLRSMHIAAPKLHTQGHEGSGSIVTTALIGVEDTTETQEAWLHSVLYF
SIO_010081: C22H5orf46
subclass of: SO_0000673
so part of: C22H5orf46
location: join(2492978..2493047,2499118..2499261,2503834..2503964)
location: region:2492978-2503964:1
so has part: feature:2492978-2493047:1:exon
so has part: feature:2499118-2499261:1:exon
so has part: feature:2503834-2503964:1:exon

XP_048187587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2492978-2493047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2499118-2499261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2503834-2503964:1:exon

Scgb3a2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Scgb3a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2510166..2513482)
location: region:2510166-2513482:-1
so has part: feature:2510166-2513482:-1:exon
subclass of: SO_0000010

125340102
type: Gene
SIO_000068: ncbigene

position:2510166:-1
position: 2510166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2513482:-1
position: 2513482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2510166-2513482:-1:exon

Scgb3a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Scgb3a2
product: secretoglobin family 3A member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_048331547.1
SIO_010081: Scgb3a2
subclass of: SO_0000673
so part of: Scgb3a2
location: complement(join(2510166..2510189,2510515..2510717,2513428..2513482))
location: region:2510166-2513482:-1
so has part: feature:2513428-2513482:-1:exon
so has part: feature:2510515-2510717:-1:exon
so has part: feature:2510166-2510189:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2513428-2513482:-1:exon

position:2513428:-1
position: 2513428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2510515-2510717:-1:exon

position:2510515:-1
position: 2510515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2510717:-1
position: 2510717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2510166-2510189:-1:exon

position:2510189:-1
position: 2510189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Scgb3a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Scgb3a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretoglobin family 3A member 2
translation: MKLLAALLVVTVGLCGYSAAAFFLNSVPLPVDQVLPLPLDSLLPFQDPLKLLLKTLGISVEHLVSGLKKCVDELGPEASEAVKKLLEALSHLV
SIO_010081: Scgb3a2
subclass of: SO_0000673
so part of: Scgb3a2
location: complement(join(2510166..2510189,2510515..2510717,2513428..2513482))
location: region:2510166-2513482:-1
so has part: feature:2513428-2513482:-1:exon
so has part: feature:2510515-2510717:-1:exon
so has part: feature:2510166-2510189:-1:exon

XP_048187504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2513428-2513482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2510515-2510717:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2510166-2510189:-1:exon

Spink1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Spink1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2526103..2534441
location: region:2526103-2534441:1
so has part: feature:2526103-2534441:1:exon
subclass of: SO_0000010

125340184
type: Gene
SIO_000068: ncbigene

position:2526103:1
position: 2526103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2534441:1
position: 2534441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2526103-2534441:1:exon

Spink1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Spink1
product: serine peptidase inhibitor Kazal type 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331631.1
SIO_010081: Spink1
subclass of: SO_0000673
so part of: Spink1
location: join(2526103..2526157,2528169..2528200,2530136..2530242,2534382..2534441)
location: region:2526103-2534441:1
so has part: feature:2526103-2526157:1:exon
so has part: feature:2528169-2528200:1:exon
so has part: feature:2530136-2530242:1:exon
so has part: feature:2534382-2534441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2526103-2526157:1:exon

position:2526157:1
position: 2526157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2528169-2528200:1:exon

position:2528169:1
position: 2528169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2528200:1
position: 2528200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2530136-2530242:1:exon

position:2530136:1
position: 2530136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2530242:1
position: 2530242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2534382-2534441:1:exon

position:2534382:1
position: 2534382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Spink1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Spink1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease inhibitor Kazal-type 1
translation: MKVDRTLLLSALALLTLCGNATAESLGRKANCNEEMMGCPRIYQPVCGTDGVTYSNECMLCAENTKRQVPVRIQKSGPC
SIO_010081: Spink1
subclass of: SO_0000673
so part of: Spink1
location: join(2526103..2526157,2528169..2528200,2530136..2530242,2534382..2534427)
location: region:2526103-2534427:1
so has part: feature:2526103-2526157:1:exon
so has part: feature:2528169-2528200:1:exon
so has part: feature:2530136-2530242:1:exon
so has part: feature:2534382-2534427:1:exon

XP_048187588.1
type: Protein
SIO_000068: ncbiprotein

position:2534427:1
position: 2534427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2526103-2526157:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2528169-2528200:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2530136-2530242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2534382-2534427:1:exon

Jakmip2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Jakmip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2583866..2637630
location: region:2583866-2637630:1
so has part: feature:2583866-2637630:1:exon
subclass of: SO_0000010

125340029
type: Gene
SIO_000068: ncbigene

position:2583866:1
position: 2583866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2637630:1
position: 2637630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2583866-2637630:1:exon

Jakmip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Jakmip2
product: janus kinase and microtubule interacting protein 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331424.1
SIO_010081: Jakmip2
subclass of: SO_0000673
so part of: Jakmip2
location: join(2583866..2584049,2590737..2591234,2595573..2595782,2597337..2597435,2601321..2601467,2602047..2602187,2604200..2604256,2605170..2605289,2606231..2606359,2608242..2608325,2609039..2609101,2613369..2613467,2614836..2614934,2616798..2616851,2617720..2617785,2621526..2621594,2622389..2622466,2624205..2624408,2628418..2628483,2637079..2637630)
location: region:2583866-2637630:1
so has part: feature:2583866-2584049:1:exon
so has part: feature:2590737-2591234:1:exon
so has part: feature:2595573-2595782:1:exon
so has part: feature:2597337-2597435:1:exon
so has part: feature:2601321-2601467:1:exon
so has part: feature:2602047-2602187:1:exon
so has part: feature:2604200-2604256:1:exon
so has part: feature:2605170-2605289:1:exon
so has part: feature:2606231-2606359:1:exon
so has part: feature:2608242-2608325:1:exon
so has part: feature:2609039-2609101:1:exon
so has part: feature:2613369-2613467:1:exon
so has part: feature:2614836-2614934:1:exon
so has part: feature:2616798-2616851:1:exon
so has part: feature:2617720-2617785:1:exon
so has part: feature:2621526-2621594:1:exon
so has part: feature:2622389-2622466:1:exon
so has part: feature:2624205-2624408:1:exon
so has part: feature:2628418-2628483:1:exon
so has part: feature:2637079-2637630:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2583866-2584049:1:exon

position:2584049:1
position: 2584049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2590737-2591234:1:exon

position:2590737:1
position: 2590737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2591234:1
position: 2591234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2595573-2595782:1:exon

position:2595573:1
position: 2595573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2595782:1
position: 2595782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2597337-2597435:1:exon

position:2597337:1
position: 2597337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2597435:1
position: 2597435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2601321-2601467:1:exon

position:2601321:1
position: 2601321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2601467:1
position: 2601467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2602047-2602187:1:exon

position:2602047:1
position: 2602047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2602187:1
position: 2602187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2604200-2604256:1:exon

position:2604200:1
position: 2604200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2604256:1
position: 2604256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2605170-2605289:1:exon

position:2605170:1
position: 2605170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2605289:1
position: 2605289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2606231-2606359:1:exon

position:2606231:1
position: 2606231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2606359:1
position: 2606359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2608242-2608325:1:exon

position:2608242:1
position: 2608242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2608325:1
position: 2608325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2609039-2609101:1:exon

position:2609039:1
position: 2609039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2609101:1
position: 2609101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2613369-2613467:1:exon

position:2613369:1
position: 2613369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2613467:1
position: 2613467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2614836-2614934:1:exon

position:2614836:1
position: 2614836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2614934:1
position: 2614934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2616798-2616851:1:exon

position:2616798:1
position: 2616798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2616851:1
position: 2616851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2617720-2617785:1:exon

position:2617720:1
position: 2617720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2617785:1
position: 2617785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2621526-2621594:1:exon

position:2621526:1
position: 2621526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2621594:1
position: 2621594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2622389-2622466:1:exon

position:2622389:1
position: 2622389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2622466:1
position: 2622466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2624205-2624408:1:exon

position:2624205:1
position: 2624205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2624408:1
position: 2624408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2628418-2628483:1:exon

position:2628418:1
position: 2628418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2628483:1
position: 2628483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2637079-2637630:1:exon

position:2637079:1
position: 2637079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Jakmip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Jakmip2
product: janus kinase and microtubule interacting protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048331426.1
SIO_010081: Jakmip2
subclass of: SO_0000673
so part of: Jakmip2
location: join(2583866..2584049,2590737..2591234,2595573..2595782,2597337..2597435,2601321..2601467,2602047..2602187,2604200..2604256,2605170..2605289,2606231..2606359,2608242..2608325,2609039..2609101,2613369..2613467,2614836..2614934,2616798..2616851,2617720..2617785,2621526..2621594,2622389..2622466,2624205..2624408,2628418..2628483,2632027..2632097,2637079..2637194)
location: region:2583866-2637194:1
so has part: feature:2583866-2584049:1:exon
so has part: feature:2590737-2591234:1:exon
so has part: feature:2595573-2595782:1:exon
so has part: feature:2597337-2597435:1:exon
so has part: feature:2601321-2601467:1:exon
so has part: feature:2602047-2602187:1:exon
so has part: feature:2604200-2604256:1:exon
so has part: feature:2605170-2605289:1:exon
so has part: feature:2606231-2606359:1:exon
so has part: feature:2608242-2608325:1:exon
so has part: feature:2609039-2609101:1:exon
so has part: feature:2613369-2613467:1:exon
so has part: feature:2614836-2614934:1:exon
so has part: feature:2616798-2616851:1:exon
so has part: feature:2617720-2617785:1:exon
so has part: feature:2621526-2621594:1:exon
so has part: feature:2622389-2622466:1:exon
so has part: feature:2624205-2624408:1:exon
so has part: feature:2628418-2628483:1:exon
so has part: feature:2632027-2632097:1:exon
so has part: feature:2637079-2637194:1:exon

position:2637194:1
position: 2637194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2583866-2584049:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2590737-2591234:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2595573-2595782:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2597337-2597435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2601321-2601467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2602047-2602187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2604200-2604256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2605170-2605289:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2606231-2606359:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2608242-2608325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2609039-2609101:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2613369-2613467:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2614836-2614934:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2616798-2616851:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2617720-2617785:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2621526-2621594:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2622389-2622466:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2624205-2624408:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2628418-2628483:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2632027-2632097:1:exon

position:2632027:1
position: 2632027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2632097:1
position: 2632097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2637079-2637194:1:exon

Jakmip2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Jakmip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 2 isoform X1
translation: MSKKGRNKGEKPEALVVALQAANEDLRTKLTDIQIELHQEKSKVSKLEREKTQEAKRIRELEQRKHTVLVTELKAKLHEEKMKELQAVRENLIKQHEQDMARTVKVRDGEIQRLKSALCALRDGSSDKVRTALTIEAREEARKLFDAERLKLLQEITDLKTAKKQVDEALSNMIQADKIKAGDLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDRIIFSLEKELETQTGYVQKLQLQKEALDEQLFLVKEAECNMSSPKREIPGRAGDGSEHCSSPDLRRNQKRIAELNATIRKLEDRNTLLGDERNELLKRVRETEKQCKPLLERNKCLAKRNDELMVSLQRMEEKLKAVTKENSEMREKITSHPPLKKLKSLNDLDQANEEQETEFLKLQVIEQQNIIDELTRDREKLIRRRKHRRSSKPIKRPVLDPFIGYDEDSMDSETSSMASFRTDRTPATPDDDLDEGLAAEESELRFRQLTKEYQALQRAYALLQEQTGGIIDAEREAKAQEQLQAEVLRYKAKIEDLEATLAQKGQDSHWVEDKQLFIKRNQELLEKIEKQEAENHRLQQELQDARDQNELLEFRNLELEERERRSPPFSLQIHPFSDGVSALQIYCMKEGVKDVNIPDLIKQLDILGDNGNLRNEEQVAIIQASTVLSLAEKWIQQIEGAEAALHQKMMELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLSEKQQEELRTAVEKLRRQMLRKSREYDCQILQERMELLQQAHQRIRDLEDKTDIQKRQIKDLEEKKIQNYGSYPRKANASKPLKMAKLFTPVQRRWKAENLPVARTAAMYFKAIIRGCLLDSSYRTLLKIYTICCIY
SIO_010081: Jakmip2
subclass of: SO_0000673
so part of: Jakmip2
location: join(2583921..2584049,2590737..2591234,2595573..2595782,2597337..2597435,2601321..2601467,2602047..2602187,2604200..2604256,2605170..2605289,2606231..2606359,2608242..2608325,2609039..2609101,2613369..2613467,2614836..2614934,2616798..2616851,2617720..2617785,2621526..2621594,2622389..2622466,2624205..2624408,2628418..2628483,2637079..2637297)
location: region:2583921-2637297:1
so has part: feature:2583921-2584049:1:exon
so has part: feature:2590737-2591234:1:exon
so has part: feature:2595573-2595782:1:exon
so has part: feature:2597337-2597435:1:exon
so has part: feature:2601321-2601467:1:exon
so has part: feature:2602047-2602187:1:exon
so has part: feature:2604200-2604256:1:exon
so has part: feature:2605170-2605289:1:exon
so has part: feature:2606231-2606359:1:exon
so has part: feature:2608242-2608325:1:exon
so has part: feature:2609039-2609101:1:exon
so has part: feature:2613369-2613467:1:exon
so has part: feature:2614836-2614934:1:exon
so has part: feature:2616798-2616851:1:exon
so has part: feature:2617720-2617785:1:exon
so has part: feature:2621526-2621594:1:exon
so has part: feature:2622389-2622466:1:exon
so has part: feature:2624205-2624408:1:exon
so has part: feature:2628418-2628483:1:exon
so has part: feature:2637079-2637297:1:exon

XP_048187381.1
type: Protein
SIO_000068: ncbiprotein

position:2583921:1
position: 2583921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2637297:1
position: 2637297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2583921-2584049:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2590737-2591234:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2595573-2595782:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2597337-2597435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2601321-2601467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2602047-2602187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2604200-2604256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2605170-2605289:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2606231-2606359:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2608242-2608325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2609039-2609101:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2613369-2613467:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2614836-2614934:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2616798-2616851:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2617720-2617785:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2621526-2621594:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2622389-2622466:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2624205-2624408:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2628418-2628483:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2637079-2637297:1:exon

Jakmip2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Jakmip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 2 isoform X2
translation: MSKKGRNKGEKPEALVVALQAANEDLRTKLTDIQIELHQEKSKVSKLEREKTQEAKRIRELEQRKHTVLVTELKAKLHEEKMKELQAVRENLIKQHEQDMARTVKVRDGEIQRLKSALCALRDGSSDKVRTALTIEAREEARKLFDAERLKLLQEITDLKTAKKQVDEALSNMIQADKIKAGDLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDRIIFSLEKELETQTGYVQKLQLQKEALDEQLFLVKEAECNMSSPKREIPGRAGDGSEHCSSPDLRRNQKRIAELNATIRKLEDRNTLLGDERNELLKRVRETEKQCKPLLERNKCLAKRNDELMVSLQRMEEKLKAVTKENSEMREKITSHPPLKKLKSLNDLDQANEEQETEFLKLQVIEQQNIIDELTRDREKLIRRRKHRRSSKPIKRPVLDPFIGYDEDSMDSETSSMASFRTDRTPATPDDDLDEGLAAEESELRFRQLTKEYQALQRAYALLQEQTGGIIDAEREAKAQEQLQAEVLRYKAKIEDLEATLAQKGQDSHWVEDKQLFIKRNQELLEKIEKQEAENHRLQQELQDARDQNELLEFRNLELEERERRSPPFSLQIHPFSDGVSALQIYCMKEGVKDVNIPDLIKQLDILGDNGNLRNEEQVAIIQASTVLSLAEKWIQQIEGAEAALHQKMMELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLSEKQQEELRTAVEKLRRQMLRKSREYDCQILQERMELLQQAHQRIRDLEDKTDIQKRQIKDLEEKFLFLFLFFSLAFILWP
SIO_010081: Jakmip2
subclass of: SO_0000673
so part of: Jakmip2
location: join(2583921..2584049,2590737..2591234,2595573..2595782,2597337..2597435,2601321..2601467,2602047..2602187,2604200..2604256,2605170..2605289,2606231..2606359,2608242..2608325,2609039..2609101,2613369..2613467,2614836..2614934,2616798..2616851,2617720..2617785,2621526..2621594,2622389..2622466,2624205..2624408,2628418..2628483,2632027..2632077)
location: region:2583921-2632077:1
so has part: feature:2583921-2584049:1:exon
so has part: feature:2590737-2591234:1:exon
so has part: feature:2595573-2595782:1:exon
so has part: feature:2597337-2597435:1:exon
so has part: feature:2601321-2601467:1:exon
so has part: feature:2602047-2602187:1:exon
so has part: feature:2604200-2604256:1:exon
so has part: feature:2605170-2605289:1:exon
so has part: feature:2606231-2606359:1:exon
so has part: feature:2608242-2608325:1:exon
so has part: feature:2609039-2609101:1:exon
so has part: feature:2613369-2613467:1:exon
so has part: feature:2614836-2614934:1:exon
so has part: feature:2616798-2616851:1:exon
so has part: feature:2617720-2617785:1:exon
so has part: feature:2621526-2621594:1:exon
so has part: feature:2622389-2622466:1:exon
so has part: feature:2624205-2624408:1:exon
so has part: feature:2628418-2628483:1:exon
so has part: feature:2632027-2632077:1:exon

XP_048187383.1
type: Protein
SIO_000068: ncbiprotein

position:2632077:1
position: 2632077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2583921-2584049:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2590737-2591234:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2595573-2595782:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2597337-2597435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2601321-2601467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2602047-2602187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2604200-2604256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2605170-2605289:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2606231-2606359:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2608242-2608325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2609039-2609101:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2613369-2613467:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2614836-2614934:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2616798-2616851:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2617720-2617785:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2621526-2621594:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2622389-2622466:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2624205-2624408:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2628418-2628483:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2632027-2632077:1:exon

Dpysl3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Dpysl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2674348..2737494
location: region:2674348-2737494:1
so has part: feature:2674348-2737494:1:exon
subclass of: SO_0000010

125339838
type: Gene
SIO_000068: ncbigene

position:2674348:1
position: 2674348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2737494:1
position: 2737494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2674348-2737494:1:exon

Dpysl3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Dpysl3
product: dihydropyrimidinase like 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 30 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048331125.1
SIO_010081: Dpysl3
subclass of: SO_0000673
so part of: Dpysl3
location: join(2674348..2674695,2719051..2719139,2720355..2720539,2723284..2723448,2724972..2725033,2725726..2725806,2729476..2729544,2730906..2731026,2732216..2732372,2733015..2733156,2734796..2734966,2735094..2735273,2736665..2736827,2737347..2737494)
location: region:2674348-2737494:1
so has part: feature:2674348-2674695:1:exon
so has part: feature:2719051-2719139:1:exon
so has part: feature:2720355-2720539:1:exon
so has part: feature:2723284-2723448:1:exon
so has part: feature:2724972-2725033:1:exon
so has part: feature:2725726-2725806:1:exon
so has part: feature:2729476-2729544:1:exon
so has part: feature:2730906-2731026:1:exon
so has part: feature:2732216-2732372:1:exon
so has part: feature:2733015-2733156:1:exon
so has part: feature:2734796-2734966:1:exon
so has part: feature:2735094-2735273:1:exon
so has part: feature:2736665-2736827:1:exon
so has part: feature:2737347-2737494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2674348-2674695:1:exon

position:2674695:1
position: 2674695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2719051-2719139:1:exon

position:2719051:1
position: 2719051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2719139:1
position: 2719139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2720355-2720539:1:exon

position:2720355:1
position: 2720355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2720539:1
position: 2720539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2723284-2723448:1:exon

position:2723284:1
position: 2723284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2723448:1
position: 2723448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2724972-2725033:1:exon

position:2724972:1
position: 2724972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2725033:1
position: 2725033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2725726-2725806:1:exon

position:2725726:1
position: 2725726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2725806:1
position: 2725806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2729476-2729544:1:exon

position:2729476:1
position: 2729476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2729544:1
position: 2729544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2730906-2731026:1:exon

position:2730906:1
position: 2730906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2731026:1
position: 2731026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2732216-2732372:1:exon

position:2732216:1
position: 2732216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2732372:1
position: 2732372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2733015-2733156:1:exon

position:2733015:1
position: 2733015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2733156:1
position: 2733156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2734796-2734966:1:exon

position:2734796:1
position: 2734796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2734966:1
position: 2734966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2735094-2735273:1:exon

position:2735094:1
position: 2735094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2735273:1
position: 2735273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2736665-2736827:1:exon

position:2736665:1
position: 2736665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2736827:1
position: 2736827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2737347-2737494:1:exon

position:2737347:1
position: 2737347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Dpysl3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Dpysl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydropyrimidinase-related protein 3 isoform X1
translation: MASGRRGWDRSHEDDLPVYLARPGSAAQVPRQKSGGMFCSVEGAFESKTLDLRALSVGQRGARGAGGAGGRGPAAAAAEGEAGDPAPPAPPAPPARVEIRAASGKEALQNLGAQGQSDRLLIKGGRIVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIEANGKMVIPGGIDVHTHFQMPYKGMTTVDDFFQGTKAALAGGTTMIIDHVVPEPESSLSEAYEKWREWADAKSCCDYALHVDITRWTDSVRQEVQSLVKDKGVNSFMVYMAYKDLYQVSNTELYEIFTCLGELGAIAQVHAENGDIIAQEQSRMLEMGITGPEGHVLSRPEELEAEAVFRAITIASQTNCPLYVTKVMSKSAADLISQARKKGNVVFGEPITASLGIDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYINSLLASGDLQLSGSAHCTFSTAQKAIGKDNFTAIPEGTNGVEERMSVIWDKAVATGKMDENQFVAVTSTNAAKVFNLYPRKGRVSVGSDSDLVIWDPDAVKIVSAKSHQSASEYNIFEGMELRGAPLVVICQGKIMMEDGNLHVTAGGGRFVPCGPFSDYVYKRIKARRKMADLHAVPRGLYDGPVFDLTTTPKGGTPAGSTRGSPTRPNPPVRNLHQSGFSLSGTQVDEGVRSASKRIVAPPGGRSNITSLS
SIO_010081: Dpysl3
subclass of: SO_0000673
so part of: Dpysl3
location: join(2674348..2674695,2719051..2719139,2720355..2720539,2723284..2723448,2724972..2725033,2725726..2725806,2729476..2729544,2730906..2731026,2732216..2732372,2733015..2733156,2734796..2734966,2735094..2735273,2736665..2736827,2737347..2737435)
location: region:2674348-2737435:1
so has part: feature:2674348-2674695:1:exon
so has part: feature:2719051-2719139:1:exon
so has part: feature:2720355-2720539:1:exon
so has part: feature:2723284-2723448:1:exon
so has part: feature:2724972-2725033:1:exon
so has part: feature:2725726-2725806:1:exon
so has part: feature:2729476-2729544:1:exon
so has part: feature:2730906-2731026:1:exon
so has part: feature:2732216-2732372:1:exon
so has part: feature:2733015-2733156:1:exon
so has part: feature:2734796-2734966:1:exon
so has part: feature:2735094-2735273:1:exon
so has part: feature:2736665-2736827:1:exon
so has part: feature:2737347-2737435:1:exon

XP_048187082.1
type: Protein
SIO_000068: ncbiprotein

position:2737435:1
position: 2737435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2674348-2674695:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2719051-2719139:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2720355-2720539:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2723284-2723448:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2724972-2725033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2725726-2725806:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2729476-2729544:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2730906-2731026:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2732216-2732372:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2733015-2733156:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2734796-2734966:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2735094-2735273:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2736665-2736827:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2737347-2737435:1:exon

Dpysl3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Dpysl3
product: dihydropyrimidinase like 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048331126.1
SIO_010081: Dpysl3
subclass of: SO_0000673
so part of: Dpysl3
location: join(2697368..2697417,2719051..2719139,2720355..2720539,2723284..2723448,2724972..2725033,2725726..2725806,2729476..2729544,2730906..2731026,2732216..2732372,2733015..2733156,2734796..2734966,2735094..2735273,2736665..2736827,2737347..2737494)
location: region:2697368-2737494:1
so has part: feature:2697368-2697417:1:exon
so has part: feature:2719051-2719139:1:exon
so has part: feature:2720355-2720539:1:exon
so has part: feature:2723284-2723448:1:exon
so has part: feature:2724972-2725033:1:exon
so has part: feature:2725726-2725806:1:exon
so has part: feature:2729476-2729544:1:exon
so has part: feature:2730906-2731026:1:exon
so has part: feature:2732216-2732372:1:exon
so has part: feature:2733015-2733156:1:exon
so has part: feature:2734796-2734966:1:exon
so has part: feature:2735094-2735273:1:exon
so has part: feature:2736665-2736827:1:exon
so has part: feature:2737347-2737494:1:exon

position:2697368:1
position: 2697368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2697368-2697417:1:exon

position:2697417:1
position: 2697417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2719051-2719139:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2720355-2720539:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2723284-2723448:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2724972-2725033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2725726-2725806:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2729476-2729544:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2730906-2731026:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2732216-2732372:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2733015-2733156:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2734796-2734966:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2735094-2735273:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2736665-2736827:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2737347-2737494:1:exon

Dpysl3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Dpysl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydropyrimidinase-related protein 3 isoform X2
translation: MSYQGKKNIPRITSDRLLIKGGRIVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIEANGKMVIPGGIDVHTHFQMPYKGMTTVDDFFQGTKAALAGGTTMIIDHVVPEPESSLSEAYEKWREWADAKSCCDYALHVDITRWTDSVRQEVQSLVKDKGVNSFMVYMAYKDLYQVSNTELYEIFTCLGELGAIAQVHAENGDIIAQEQSRMLEMGITGPEGHVLSRPEELEAEAVFRAITIASQTNCPLYVTKVMSKSAADLISQARKKGNVVFGEPITASLGIDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYINSLLASGDLQLSGSAHCTFSTAQKAIGKDNFTAIPEGTNGVEERMSVIWDKAVATGKMDENQFVAVTSTNAAKVFNLYPRKGRVSVGSDSDLVIWDPDAVKIVSAKSHQSASEYNIFEGMELRGAPLVVICQGKIMMEDGNLHVTAGGGRFVPCGPFSDYVYKRIKARRKMADLHAVPRGLYDGPVFDLTTTPKGGTPAGSTRGSPTRPNPPVRNLHQSGFSLSGTQVDEGVRSASKRIVAPPGGRSNITSLS
SIO_010081: Dpysl3
subclass of: SO_0000673
so part of: Dpysl3
location: join(2697379..2697417,2719051..2719139,2720355..2720539,2723284..2723448,2724972..2725033,2725726..2725806,2729476..2729544,2730906..2731026,2732216..2732372,2733015..2733156,2734796..2734966,2735094..2735273,2736665..2736827,2737347..2737435)
location: region:2697379-2737435:1
so has part: feature:2697379-2697417:1:exon
so has part: feature:2719051-2719139:1:exon
so has part: feature:2720355-2720539:1:exon
so has part: feature:2723284-2723448:1:exon
so has part: feature:2724972-2725033:1:exon
so has part: feature:2725726-2725806:1:exon
so has part: feature:2729476-2729544:1:exon
so has part: feature:2730906-2731026:1:exon
so has part: feature:2732216-2732372:1:exon
so has part: feature:2733015-2733156:1:exon
so has part: feature:2734796-2734966:1:exon
so has part: feature:2735094-2735273:1:exon
so has part: feature:2736665-2736827:1:exon
so has part: feature:2737347-2737435:1:exon

XP_048187083.1
type: Protein
SIO_000068: ncbiprotein

position:2697379:1
position: 2697379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2697379-2697417:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2719051-2719139:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2720355-2720539:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2723284-2723448:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2724972-2725033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2725726-2725806:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2729476-2729544:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2730906-2731026:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2732216-2732372:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2733015-2733156:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2734796-2734966:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2735094-2735273:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2736665-2736827:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2737347-2737435:1:exon

Stk32a
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Stk32a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2745374..2818651)
location: region:2745374-2818651:-1
so has part: feature:2745374-2818651:-1:exon
subclass of: SO_0000010

125339922
type: Gene
SIO_000068: ncbigene

position:2745374:-1
position: 2745374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2818651:-1
position: 2818651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2745374-2818651:-1:exon

Stk32a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Stk32a
product: serine/threonine kinase 32A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331296.1
SIO_010081: Stk32a
subclass of: SO_0000673
so part of: Stk32a
location: complement(join(2745374..2745487,2746096..2746160,2748124..2748252,2749583..2749708,2750264..2750380,2752636..2752733,2760493..2760582,2766946..2766983,2781320..2781493,2801872..2802023,2803447..2803502,2818516..2818651))
location: region:2745374-2818651:-1
so has part: feature:2818516-2818651:-1:exon
so has part: feature:2803447-2803502:-1:exon
so has part: feature:2801872-2802023:-1:exon
so has part: feature:2781320-2781493:-1:exon
so has part: feature:2766946-2766983:-1:exon
so has part: feature:2760493-2760582:-1:exon
so has part: feature:2752636-2752733:-1:exon
so has part: feature:2750264-2750380:-1:exon
so has part: feature:2749583-2749708:-1:exon
so has part: feature:2748124-2748252:-1:exon
so has part: feature:2746096-2746160:-1:exon
so has part: feature:2745374-2745487:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2818516-2818651:-1:exon

position:2818516:-1
position: 2818516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2803447-2803502:-1:exon

position:2803447:-1
position: 2803447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2803502:-1
position: 2803502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2801872-2802023:-1:exon

position:2801872:-1
position: 2801872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2802023:-1
position: 2802023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2781320-2781493:-1:exon

position:2781320:-1
position: 2781320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2781493:-1
position: 2781493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2766946-2766983:-1:exon

position:2766946:-1
position: 2766946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2766983:-1
position: 2766983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2760493-2760582:-1:exon

position:2760493:-1
position: 2760493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2760582:-1
position: 2760582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2752636-2752733:-1:exon

position:2752636:-1
position: 2752636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2752733:-1
position: 2752733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2750264-2750380:-1:exon

position:2750264:-1
position: 2750264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2750380:-1
position: 2750380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2749583-2749708:-1:exon

position:2749583:-1
position: 2749583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2749708:-1
position: 2749708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2748124-2748252:-1:exon

position:2748124:-1
position: 2748124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2748252:-1
position: 2748252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2746096-2746160:-1:exon

position:2746096:-1
position: 2746096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2746160:-1
position: 2746160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2745374-2745487:-1:exon

position:2745487:-1
position: 2745487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Stk32a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Stk32a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 32A
translation: MGANASSKPPVFDENADVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVRFEEDTVKLFICELAMALDYLQGQRIIHRDMKPDNILLDEHGHVHITDFNIAAVLPDEARITTLAGTKPYMAPEMFGSRKEAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIAHTFQTAMVTYPAAWSQEMVSLLKKLLEPDPDRRVSHLADVQRLPSMNDVNWDAVLHKRLTPGFVPSKGRLNCDPTFELEEMILESKPLHKKKKRLAKREKEIRKCDSAQTCLLREHLESVQKEFIIFNREKAQRDFTRREAGVALDHTPQEEDGQNNNL
SIO_010081: Stk32a
subclass of: SO_0000673
so part of: Stk32a
location: complement(join(2745400..2745487,2746096..2746160,2748124..2748252,2749583..2749708,2750264..2750380,2752636..2752733,2760493..2760582,2766946..2766983,2781320..2781493,2801872..2802023,2803447..2803502,2818516..2818567))
location: region:2745400-2818567:-1
so has part: feature:2818516-2818567:-1:exon
so has part: feature:2803447-2803502:-1:exon
so has part: feature:2801872-2802023:-1:exon
so has part: feature:2781320-2781493:-1:exon
so has part: feature:2766946-2766983:-1:exon
so has part: feature:2760493-2760582:-1:exon
so has part: feature:2752636-2752733:-1:exon
so has part: feature:2750264-2750380:-1:exon
so has part: feature:2749583-2749708:-1:exon
so has part: feature:2748124-2748252:-1:exon
so has part: feature:2746096-2746160:-1:exon
so has part: feature:2745400-2745487:-1:exon

XP_048187253.1
type: Protein
SIO_000068: ncbiprotein

position:2745400:-1
position: 2745400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2818567:-1
position: 2818567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2818516-2818567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2803447-2803502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2801872-2802023:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2781320-2781493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2766946-2766983:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2760493-2760582:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2752636-2752733:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2750264-2750380:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2749583-2749708:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2748124-2748252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2746096-2746160:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2745400-2745487:-1:exon

Ppp2r2b
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ppp2r2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2907416..3204455
location: region:2907416-3204455:1
so has part: feature:2907416-3204455:1:exon
subclass of: SO_0000010

125340030
type: Gene
SIO_000068: ncbigene

position:2907416:1
position: 2907416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3204455:1
position: 3204455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2907416-3204455:1:exon

Ppp2r2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ppp2r2b
product: protein phosphatase 2 regulatory subunit Bbeta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 24 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331428.1
SIO_010081: Ppp2r2b
subclass of: SO_0000673
so part of: Ppp2r2b
location: join(2907416..2907725,3138287..3138384,3141617..3141782,3144819..3144931,3174527..3174704,3182626..3182790,3196441..3196610,3202339..3202430,3204012..3204455)
location: region:2907416-3204455:1
so has part: feature:2907416-2907725:1:exon
so has part: feature:3138287-3138384:1:exon
so has part: feature:3141617-3141782:1:exon
so has part: feature:3144819-3144931:1:exon
so has part: feature:3174527-3174704:1:exon
so has part: feature:3182626-3182790:1:exon
so has part: feature:3196441-3196610:1:exon
so has part: feature:3202339-3202430:1:exon
so has part: feature:3204012-3204455:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2907416-2907725:1:exon

position:2907725:1
position: 2907725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3138287-3138384:1:exon

position:3138287:1
position: 3138287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3138384:1
position: 3138384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3141617-3141782:1:exon

position:3141617:1
position: 3141617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141782:1
position: 3141782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3144819-3144931:1:exon

position:3144819:1
position: 3144819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3144931:1
position: 3144931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3174527-3174704:1:exon

position:3174527:1
position: 3174527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3174704:1
position: 3174704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3182626-3182790:1:exon

position:3182626:1
position: 3182626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3182790:1
position: 3182790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3196441-3196610:1:exon

position:3196441:1
position: 3196441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3196610:1
position: 3196610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3202339-3202430:1:exon

position:3202339:1
position: 3202339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3202430:1
position: 3202430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3204012-3204455:1:exon

position:3204012:1
position: 3204012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ppp2r2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ppp2r2b
product: protein phosphatase 2 regulatory subunit Bbeta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 35 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048331427.1
SIO_010081: Ppp2r2b
subclass of: SO_0000673
so part of: Ppp2r2b
location: join(2907429..2907725,3008659..3008852,3138287..3138384,3141617..3141782,3144819..3144931,3174527..3174704,3182626..3182790,3196441..3196610,3202339..3202430,3204012..3204455)
location: region:2907429-3204455:1
so has part: feature:2907429-2907725:1:exon
so has part: feature:3008659-3008852:1:exon
so has part: feature:3138287-3138384:1:exon
so has part: feature:3141617-3141782:1:exon
so has part: feature:3144819-3144931:1:exon
so has part: feature:3174527-3174704:1:exon
so has part: feature:3182626-3182790:1:exon
so has part: feature:3196441-3196610:1:exon
so has part: feature:3202339-3202430:1:exon
so has part: feature:3204012-3204455:1:exon

position:2907429:1
position: 2907429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2907429-2907725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3008659-3008852:1:exon

position:3008659:1
position: 3008659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3008852:1
position: 3008852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3138287-3138384:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3141617-3141782:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3144819-3144931:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3174527-3174704:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3182626-3182790:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3196441-3196610:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3202339-3202430:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3204012-3204455:1:exon

Ppp2r2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ppp2r2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
translation: MFSLEDEMLLSLPALHLQTSEHHPLFQLPHGRLGPWRSPAGSRAALSREPGRGRGSWRLVCRLVVPTHASPPSMEEDIDTRKINNSFLRDHSYATEADIISTVEFNHTGELLATGDKGGRVVIFQREQESKTQVHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEEGRLRDPATITTLRVPVLRPMDLMVEATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPANMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRASALCDRHTKFFEEPEDPSNRSFFSEIISSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILHTAWHPSENIIAVAATNNLYIFQDKVN
SIO_010081: Ppp2r2b
subclass of: SO_0000673
so part of: Ppp2r2b
location: join(2907631..2907725,3008659..3008852,3138287..3138384,3141617..3141782,3144819..3144931,3174527..3174704,3182626..3182790,3196441..3196610,3202339..3202430,3204012..3204291)
location: region:2907631-3204291:1
so has part: feature:2907631-2907725:1:exon
so has part: feature:3008659-3008852:1:exon
so has part: feature:3138287-3138384:1:exon
so has part: feature:3141617-3141782:1:exon
so has part: feature:3144819-3144931:1:exon
so has part: feature:3174527-3174704:1:exon
so has part: feature:3182626-3182790:1:exon
so has part: feature:3196441-3196610:1:exon
so has part: feature:3202339-3202430:1:exon
so has part: feature:3204012-3204291:1:exon

XP_048187384.1
type: Protein
SIO_000068: ncbiprotein

position:2907631:1
position: 2907631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3204291:1
position: 3204291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2907631-2907725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3008659-3008852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3138287-3138384:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3141617-3141782:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3144819-3144931:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3174527-3174704:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3182626-3182790:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3196441-3196610:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3202339-3202430:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3204012-3204291:1:exon

Ppp2r2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ppp2r2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2
translation: MKCFSRYLPYIFRPPNTILSSSCHTEADIISTVEFNHTGELLATGDKGGRVVIFQREQESKTQVHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEEGRLRDPATITTLRVPVLRPMDLMVEATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPANMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRASALCDRHTKFFEEPEDPSNRSFFSEIISSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILHTAWHPSENIIAVAATNNLYIFQDKVN
SIO_010081: Ppp2r2b
subclass of: SO_0000673
so part of: Ppp2r2b
location: join(2907647..2907725,3138287..3138384,3141617..3141782,3144819..3144931,3174527..3174704,3182626..3182790,3196441..3196610,3202339..3202430,3204012..3204291)
location: region:2907647-3204291:1
so has part: feature:2907647-2907725:1:exon
so has part: feature:3138287-3138384:1:exon
so has part: feature:3141617-3141782:1:exon
so has part: feature:3144819-3144931:1:exon
so has part: feature:3174527-3174704:1:exon
so has part: feature:3182626-3182790:1:exon
so has part: feature:3196441-3196610:1:exon
so has part: feature:3202339-3202430:1:exon
so has part: feature:3204012-3204291:1:exon

XP_048187385.1
type: Protein
SIO_000068: ncbiprotein

position:2907647:1
position: 2907647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2907647-2907725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3138287-3138384:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3141617-3141782:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3144819-3144931:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3174527-3174704:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3182626-3182790:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3196441-3196610:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3202339-3202430:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3204012-3204291:1:exon

Ppp2r2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ppp2r2b
product: protein phosphatase 2 regulatory subunit Bbeta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 33 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048331429.1
SIO_010081: Ppp2r2b
subclass of: SO_0000673
so part of: Ppp2r2b
location: join(3008628..3008852,3138287..3138384,3141617..3141782,3144819..3144931,3174527..3174704,3182626..3182790,3196441..3196610,3202339..3202430,3204012..3204455)
location: region:3008628-3204455:1
so has part: feature:3008628-3008852:1:exon
so has part: feature:3138287-3138384:1:exon
so has part: feature:3141617-3141782:1:exon
so has part: feature:3144819-3144931:1:exon
so has part: feature:3174527-3174704:1:exon
so has part: feature:3182626-3182790:1:exon
so has part: feature:3196441-3196610:1:exon
so has part: feature:3202339-3202430:1:exon
so has part: feature:3204012-3204455:1:exon

position:3008628:1
position: 3008628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3008628-3008852:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3138287-3138384:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3141617-3141782:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3144819-3144931:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3174527-3174704:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3182626-3182790:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3196441-3196610:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3202339-3202430:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3204012-3204455:1:exon

Ppp2r2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ppp2r2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X3
translation: MEEDIDTRKINNSFLRDHSYATEADIISTVEFNHTGELLATGDKGGRVVIFQREQESKTQVHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEEGRLRDPATITTLRVPVLRPMDLMVEATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPANMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRASALCDRHTKFFEEPEDPSNRSFFSEIISSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILHTAWHPSENIIAVAATNNLYIFQDKVN
SIO_010081: Ppp2r2b
subclass of: SO_0000673
so part of: Ppp2r2b
location: join(3008783..3008852,3138287..3138384,3141617..3141782,3144819..3144931,3174527..3174704,3182626..3182790,3196441..3196610,3202339..3202430,3204012..3204291)
location: region:3008783-3204291:1
so has part: feature:3008783-3008852:1:exon
so has part: feature:3138287-3138384:1:exon
so has part: feature:3141617-3141782:1:exon
so has part: feature:3144819-3144931:1:exon
so has part: feature:3174527-3174704:1:exon
so has part: feature:3182626-3182790:1:exon
so has part: feature:3196441-3196610:1:exon
so has part: feature:3202339-3202430:1:exon
so has part: feature:3204012-3204291:1:exon

XP_048187386.1
type: Protein
SIO_000068: ncbiprotein

position:3008783:1
position: 3008783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3008783-3008852:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3138287-3138384:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3141617-3141782:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3144819-3144931:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3174527-3174704:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3182626-3182790:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3196441-3196610:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3202339-3202430:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3204012-3204291:1:exon

Tcerg1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tcerg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3240714..3293206)
location: region:3240714-3293206:-1
so has part: feature:3240714-3293206:-1:exon
subclass of: SO_0000010

125339823
type: Gene
SIO_000068: ncbigene

position:3240714:-1
position: 3240714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3293206:-1
position: 3293206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3240714-3293206:-1:exon

Tcerg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tcerg1
product: transcription elongation regulator 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331104.1
SIO_010081: Tcerg1
subclass of: SO_0000673
so part of: Tcerg1
location: complement(join(3240714..3241759,3242931..3243031,3244168..3244251,3244844..3245023,3246673..3246855,3247116..3247280,3250528..3250678,3254979..3255097,3260903..3260992,3261793..3261928,3264389..3264455,3264602..3264658,3266289..3266449,3271121..3271209,3272012..3272124,3273001..3273201,3278786..3279028,3283684..3284149,3285223..3285375,3286613..3286838,3293110..3293206))
location: region:3240714-3293206:-1
so has part: feature:3293110-3293206:-1:exon
so has part: feature:3286613-3286838:-1:exon
so has part: feature:3285223-3285375:-1:exon
so has part: feature:3283684-3284149:-1:exon
so has part: feature:3278786-3279028:-1:exon
so has part: feature:3273001-3273201:-1:exon
so has part: feature:3272012-3272124:-1:exon
so has part: feature:3271121-3271209:-1:exon
so has part: feature:3266289-3266449:-1:exon
so has part: feature:3264602-3264658:-1:exon
so has part: feature:3264389-3264455:-1:exon
so has part: feature:3261793-3261928:-1:exon
so has part: feature:3260903-3260992:-1:exon
so has part: feature:3254979-3255097:-1:exon
so has part: feature:3250528-3250678:-1:exon
so has part: feature:3247116-3247280:-1:exon
so has part: feature:3246673-3246855:-1:exon
so has part: feature:3244844-3245023:-1:exon
so has part: feature:3244168-3244251:-1:exon
so has part: feature:3242931-3243031:-1:exon
so has part: feature:3240714-3241759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3293110-3293206:-1:exon

position:3293110:-1
position: 3293110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3286613-3286838:-1:exon

position:3286613:-1
position: 3286613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3286838:-1
position: 3286838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3285223-3285375:-1:exon

position:3285223:-1
position: 3285223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3285375:-1
position: 3285375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3283684-3284149:-1:exon

position:3283684:-1
position: 3283684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3284149:-1
position: 3284149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3278786-3279028:-1:exon

position:3278786:-1
position: 3278786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3279028:-1
position: 3279028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3273001-3273201:-1:exon

position:3273001:-1
position: 3273001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3273201:-1
position: 3273201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3272012-3272124:-1:exon

position:3272012:-1
position: 3272012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3272124:-1
position: 3272124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3271121-3271209:-1:exon

position:3271121:-1
position: 3271121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3271209:-1
position: 3271209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3266289-3266449:-1:exon

position:3266289:-1
position: 3266289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3266449:-1
position: 3266449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3264602-3264658:-1:exon

position:3264602:-1
position: 3264602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3264658:-1
position: 3264658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3264389-3264455:-1:exon

position:3264389:-1
position: 3264389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3264455:-1
position: 3264455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3261793-3261928:-1:exon

position:3261793:-1
position: 3261793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3261928:-1
position: 3261928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3260903-3260992:-1:exon

position:3260903:-1
position: 3260903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3260992:-1
position: 3260992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3254979-3255097:-1:exon

position:3254979:-1
position: 3254979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3255097:-1
position: 3255097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3250528-3250678:-1:exon

position:3250528:-1
position: 3250528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3250678:-1
position: 3250678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3247116-3247280:-1:exon

position:3247116:-1
position: 3247116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3247280:-1
position: 3247280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3246673-3246855:-1:exon

position:3246673:-1
position: 3246673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3246855:-1
position: 3246855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3244844-3245023:-1:exon

position:3244844:-1
position: 3244844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3245023:-1
position: 3245023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3244168-3244251:-1:exon

position:3244168:-1
position: 3244168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3244251:-1
position: 3244251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3242931-3243031:-1:exon

position:3242931:-1
position: 3242931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3243031:-1
position: 3243031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3240714-3241759:-1:exon

position:3241759:-1
position: 3241759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tcerg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tcerg1
product: transcription elongation regulator 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331103.1
SIO_010081: Tcerg1
subclass of: SO_0000673
so part of: Tcerg1
location: complement(join(3240714..3241759,3242931..3243031,3244168..3244251,3244844..3245023,3246673..3246855,3247116..3247280,3250528..3250678,3254979..3255097,3260903..3260992,3261793..3261928,3263272..3263322,3264389..3264455,3264602..3264658,3266289..3266449,3271121..3271209,3272012..3272124,3273001..3273201,3278786..3279028,3283684..3284149,3285223..3285375,3286613..3286838,3293110..3293206))
location: region:3240714-3293206:-1
so has part: feature:3293110-3293206:-1:exon
so has part: feature:3286613-3286838:-1:exon
so has part: feature:3285223-3285375:-1:exon
so has part: feature:3283684-3284149:-1:exon
so has part: feature:3278786-3279028:-1:exon
so has part: feature:3273001-3273201:-1:exon
so has part: feature:3272012-3272124:-1:exon
so has part: feature:3271121-3271209:-1:exon
so has part: feature:3266289-3266449:-1:exon
so has part: feature:3264602-3264658:-1:exon
so has part: feature:3264389-3264455:-1:exon
so has part: feature:3263272-3263322:-1:exon
so has part: feature:3261793-3261928:-1:exon
so has part: feature:3260903-3260992:-1:exon
so has part: feature:3254979-3255097:-1:exon
so has part: feature:3250528-3250678:-1:exon
so has part: feature:3247116-3247280:-1:exon
so has part: feature:3246673-3246855:-1:exon
so has part: feature:3244844-3245023:-1:exon
so has part: feature:3244168-3244251:-1:exon
so has part: feature:3242931-3243031:-1:exon
so has part: feature:3240714-3241759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3293110-3293206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3286613-3286838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3285223-3285375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3283684-3284149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3278786-3279028:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3273001-3273201:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3272012-3272124:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3271121-3271209:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3266289-3266449:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3264602-3264658:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3264389-3264455:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3263272-3263322:-1:exon

position:3263272:-1
position: 3263272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3263322:-1
position: 3263322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3261793-3261928:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3260903-3260992:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3254979-3255097:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3250528-3250678:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3247116-3247280:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3246673-3246855:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3244844-3245023:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3244168-3244251:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3242931-3243031:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3240714-3241759:-1:exon

Tcerg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tcerg1
product: transcription elongation regulator 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048331102.1
SIO_010081: Tcerg1
subclass of: SO_0000673
so part of: Tcerg1
location: complement(join(3240714..3241759,3242931..3243031,3244168..3244251,3244844..3245023,3246673..3246855,3247116..3247280,3250528..3250678,3254979..3255097,3260903..3260992,3261793..3261928,3264389..3264455,3264602..3264658,3266289..3266449,3271121..3271209,3272012..3272124,3273001..3273201,3274670..3274732,3278786..3279028,3283684..3284149,3285223..3285375,3286613..3286838,3293110..3293206))
location: region:3240714-3293206:-1
so has part: feature:3293110-3293206:-1:exon
so has part: feature:3286613-3286838:-1:exon
so has part: feature:3285223-3285375:-1:exon
so has part: feature:3283684-3284149:-1:exon
so has part: feature:3278786-3279028:-1:exon
so has part: feature:3274670-3274732:-1:exon
so has part: feature:3273001-3273201:-1:exon
so has part: feature:3272012-3272124:-1:exon
so has part: feature:3271121-3271209:-1:exon
so has part: feature:3266289-3266449:-1:exon
so has part: feature:3264602-3264658:-1:exon
so has part: feature:3264389-3264455:-1:exon
so has part: feature:3261793-3261928:-1:exon
so has part: feature:3260903-3260992:-1:exon
so has part: feature:3254979-3255097:-1:exon
so has part: feature:3250528-3250678:-1:exon
so has part: feature:3247116-3247280:-1:exon
so has part: feature:3246673-3246855:-1:exon
so has part: feature:3244844-3245023:-1:exon
so has part: feature:3244168-3244251:-1:exon
so has part: feature:3242931-3243031:-1:exon
so has part: feature:3240714-3241759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3293110-3293206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3286613-3286838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3285223-3285375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3283684-3284149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3278786-3279028:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3274670-3274732:-1:exon

position:3274670:-1
position: 3274670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3274732:-1
position: 3274732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3273001-3273201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3272012-3272124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3271121-3271209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3266289-3266449:-1:exon