Perognathus longimembris pacificus isolate PPM17 chromosome 19, ASM2315922v1, whole genome shotgun sequence.
type: Entry
definition: Perognathus longimembris pacificus isolate PPM17 chromosome 19, ASM2315922v1, whole genome shotgun sequence.
sequence version: NC_063179.1
sequence date: 2022-05-19
sequence: sequence
division: CON
label: NC_063179.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA837248
dblink: SAMN26876106
keyword: WGS
keyword: RefSeq
source: Perognathus longimembris pacificus (Pacific pocket mouse)
organism: Perognathus longimembris pacificus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Perognathinae; Perognathus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM041282.1.\nAssembly name: ASM2315922v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the San Diego Zoo Wildlife\nAlliance on 2022/04/27. The original whole-genome shotgun project\nhas the accession JALGBO000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: San Diego Zoo Wildlife Alliance\nAssembly Date :: 2021\nAssembly Method :: Peregrine v. JUNE-2020; HiRise v.\n JULY-2020; Juicer v. DECEMBER-2020;\n Juicebox Assembly Tools v. DECEMBER-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 23.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Perognathus longimembris pacificus\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 47349414
topology: linear
so has quality: SO_0000987
location: 1..47349414
location: region:1-47349414:1
RO_0002162: 214514

NC_063179
type: RefSeq
SIO_000068: refseq

PRJNA837248
type: BioProject
SIO_000068: bioproject

SAMN26876106
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47349414:1
position: 47349414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-47349414:1:source
so part of: sequence
organism: Perognathus longimembris pacificus
mol type: genomic DNA
isolate: PPM17
sub species: pacificus
chromosome: 19
sex: male
cell line: 21356
cell type: fibroblast
tissue type: trachea
dev stage: adult
country: USA: Santa Margarita
collection date: 2019
collected by: SDZWA

214514
type: Taxonomy
SIO_000068: taxonomy

LOC125367861
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367861
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 36453..36959
location: region:36453-36959:1
so has part: feature:36453-36959:1:exon

125367861
type: Gene
SIO_000068: ncbigene

position:36453:1
position: 36453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36959:1
position: 36959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36453-36959:1:exon

LOC125367861
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125367861
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC125367861
subclass of: SO_0000673
so part of: LOC125367861
location: 36453..36959
location: region:36453-36959:1
so has part: feature:36453-36959:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36453-36959:1:exon

Prdm9
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Prdm9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 81684..99118
location: region:81684-99118:1
so has part: feature:81684-99118:1:exon
subclass of: SO_0000010

125367699
type: Gene
SIO_000068: ncbigene

position:81684:1
position: 81684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99118:1
position: 99118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81684-99118:1:exon

Prdm9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Prdm9
product: PR/SET domain 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048368403.1
SIO_010081: Prdm9
subclass of: SO_0000673
so part of: Prdm9
location: join(81684..81875,82655..82778,83845..83952,87894..87949,90167..90320,91229..91330,91541..91812,92179..92246,94898..95091,97341..99118)
location: region:81684-99118:1
so has part: feature:81684-81875:1:exon
so has part: feature:82655-82778:1:exon
so has part: feature:83845-83952:1:exon
so has part: feature:87894-87949:1:exon
so has part: feature:90167-90320:1:exon
so has part: feature:91229-91330:1:exon
so has part: feature:91541-91812:1:exon
so has part: feature:92179-92246:1:exon
so has part: feature:94898-95091:1:exon
so has part: feature:97341-99118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81684-81875:1:exon

position:81875:1
position: 81875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82655-82778:1:exon

position:82655:1
position: 82655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82778:1
position: 82778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:83845-83952:1:exon

position:83845:1
position: 83845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83952:1
position: 83952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87894-87949:1:exon

position:87894:1
position: 87894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87949:1
position: 87949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:90167-90320:1:exon

position:90167:1
position: 90167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90320:1
position: 90320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91229-91330:1:exon

position:91229:1
position: 91229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91330:1
position: 91330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:91541-91812:1:exon

position:91541:1
position: 91541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91812:1
position: 91812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:92179-92246:1:exon

position:92179:1
position: 92179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92246:1
position: 92246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:94898-95091:1:exon

position:94898:1
position: 94898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95091:1
position: 95091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:97341-99118:1:exon

position:97341:1
position: 97341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Prdm9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Prdm9
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:98741..98743,aa:OTHER)
product: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase PRDM9
translation: MSIPDSSLEDSPEEEAGRPGCKPKVKDAFKDISMYFSKEEWTEMGEWEKIHYRNMKRNYNMLISIGLKAPRPVFMCHRRQAIKPQVDDTDDSDEEWTPRQQVKSPWVTFRTEQSKHQNQKGMPKTPLGKKPSLKKFSGITNVLKTSGLEQVQTVSPPGEASTYRQHYKQNLGPRTKEVKMRMYSLRERKGYTYEEVSEPQDDDYLYCEQCQNFFINSCIVHGPPIFVTDNVVDREHYDRSVLSLPPGLRIRQSSIPEAGLGVWNEECDLPLGLHFGPYEGQITEDEDVANSGYSWMITKGRNCYVYVDGKDKSQANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIKAGCELLVWYGDEYGQELGIKWGSKWKKELTAETEHKLEIHPCPLCSLAFSSQKFLSQHMEHSHHSQTFLRTSFRKNFQPWDPYQGDQLQEQQHLYNQNDKVADQEIKGSSKPTHKNTTHGVISRAFSSTPKGQVGRPGGTEKTMDEELRTVQKVNPDAASKLFVKAGISRIVPVKNDKSNIKHQPTHTGEKPYVCRECGRGFTWKSDLTRHQRTHTGEKPYVCGECGRGFTWKSDLTGHQRTHTGEKPYVCRECGRGFTWKSDLTRHQRTHTGEKPYVCRECGRGFTLKSHLTGHQRTHTGEKPYVCRECGRGFTVKSHLTQHQRTHTGEKPYVCRECGRGFTWKSDLTRHQRTHTGEKPYVCRECGRGFTVKSHLTRHQRTHTGEKPYVCRECGRGFTLKSHLTGHQRTHTGEKPYVCRECGRGFTVKSHLTGHQRTHTGEKPYVCRECGRGFTQKSHLTQHQRTHTGEKPYVCGECGRGFTVKSHLTWHQRTHTGEKPXACRECEQGFRLKSSFREHRRAHTEQAKPLLNNHRNDKCSTSR
SIO_010081: Prdm9
subclass of: SO_0000673
so part of: Prdm9
location: join(81804..81875,82655..82778,83845..83952,87894..87949,90167..90320,91229..91330,91541..91812,92179..92246,94898..95091,97341..98872)
location: region:81804-98872:1
so has part: feature:81804-81875:1:exon
so has part: feature:82655-82778:1:exon
so has part: feature:83845-83952:1:exon
so has part: feature:87894-87949:1:exon
so has part: feature:90167-90320:1:exon
so has part: feature:91229-91330:1:exon
so has part: feature:91541-91812:1:exon
so has part: feature:92179-92246:1:exon
so has part: feature:94898-95091:1:exon
so has part: feature:97341-98872:1:exon

XP_048224360.1
type: Protein
SIO_000068: ncbiprotein

position:81804:1
position: 81804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98872:1
position: 98872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81804-81875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82655-82778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83845-83952:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87894-87949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90167-90320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91229-91330:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91541-91812:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92179-92246:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:94898-95091:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97341-98872:1:exon

Lrrc14b
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Lrrc14b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 99898..104838
location: region:99898-104838:1
so has part: feature:99898-104838:1:exon
subclass of: SO_0000010

125367760
type: Gene
SIO_000068: ncbigene

position:99898:1
position: 99898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104838:1
position: 104838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99898-104838:1:exon

Lrrc14b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Lrrc14b
product: leucine rich repeat containing 14B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048368454.1
SIO_010081: Lrrc14b
subclass of: SO_0000673
so part of: Lrrc14b
location: join(99898..101269,103720..104838)
location: region:99898-104838:1
so has part: feature:99898-101269:1:exon
so has part: feature:103720-104838:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99898-101269:1:exon

position:101269:1
position: 101269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103720-104838:1:exon

position:103720:1
position: 103720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Lrrc14b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Lrrc14b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 14B
translation: MRSLRFISAEVLVSHPNVAVESLDSVAYNLYPLLFKASYLREQAEVTRAVLSCWPLEEFQLNVLLGPSTDHPEDLRDRACKTCLEACVQGLADHVLQGRSHRLQKADFTGIRDVQVQQCPCGRALGRWGRTELLARICCQLQAEPRTVRRPIEVLIDLFVTEGNFEMVVQALKPIDLAPLQMHCPSFRADSLSPGQLLQVLDLARPGELRKLEVVHNVRLHAGHVQQLLAQVGFPHLTSLTLPTKAFDIPFTAVPTSEGEDCLLASIARELSRMTQLVELSVAFSTLTGKIQTLLGPLKTPLRMLDLTNCALNHEDMAFLADCNHAAHLEVLDLSGHNLLHLYPSTFLKLLRQAAQTLRVLTLEECGITDSHVGMMILGLSSCHQLQEFKFLGNPLSACALKRLFSALCELPELRYIEFPVPKECYPEGVAYPQDELAMSKFDQQKYAVIAEELHTVLLQANREDIHTSTPLFGGFDPEVNETSHELGAFLLQAFKTALENFSRALKQVE
SIO_010081: Lrrc14b
subclass of: SO_0000673
so part of: Lrrc14b
location: join(100383..101269,103720..104365)
location: region:100383-104365:1
so has part: feature:100383-101269:1:exon
so has part: feature:103720-104365:1:exon

XP_048224411.1
type: Protein
SIO_000068: ncbiprotein

position:100383:1
position: 100383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104365:1
position: 104365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100383-101269:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103720-104365:1:exon

Ccdc127
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ccdc127
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(110090..118078)
location: region:110090-118078:-1
so has part: feature:110090-118078:-1:exon
subclass of: SO_0000010

125367786
type: Gene
SIO_000068: ncbigene

position:110090:-1
position: 110090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118078:-1
position: 118078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110090-118078:-1:exon

Ccdc127
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ccdc127
product: coiled-coil domain containing 127
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368478.1
SIO_010081: Ccdc127
subclass of: SO_0000673
so part of: Ccdc127
location: complement(join(110090..111187,113865..113995,117916..118078))
location: region:110090-118078:-1
so has part: feature:117916-118078:-1:exon
so has part: feature:113865-113995:-1:exon
so has part: feature:110090-111187:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117916-118078:-1:exon

position:117916:-1
position: 117916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113865-113995:-1:exon

position:113865:-1
position: 113865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113995:-1
position: 113995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:110090-111187:-1:exon

position:111187:-1
position: 111187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ccdc127
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ccdc127
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 127
translation: MNNLNDPPNWNIRPNPRADGGDGSRWNYALLVPMLGLAAFRWIWSRESQKEIEKEREVYRQRTVAFQQDLEARYHAVISEHRRAVAQLSLELEKEQNRTASYREALISQGRKLVEERKLLEQERARVLQEKSQVQPLRSVYLSCLEEEQDWQKKAQLTLKEVGEALMERQNIYCSPVLPRRVRLQLEKNLLVRVSMDSVATDLDMAAGLTDIFKHDKHCGDIWNTNKRQNGRLMWLYLKYWELVVELKKFKRVEQAILEK
SIO_010081: Ccdc127
subclass of: SO_0000673
so part of: Ccdc127
location: complement(join(110526..111187,113865..113985))
location: region:110526-113985:-1
so has part: feature:113865-113985:-1:exon
so has part: feature:110526-111187:-1:exon

XP_048224435.1
type: Protein
SIO_000068: ncbiprotein

position:110526:-1
position: 110526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113985:-1
position: 113985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113865-113985:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110526-111187:-1:exon

Sdha
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Sdha
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 118437..150965
location: region:118437-150965:1
so has part: feature:118437-150965:1:exon
subclass of: SO_0000010

125367785
type: Gene
SIO_000068: ncbigene

position:118437:1
position: 118437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150965:1
position: 150965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118437-150965:1:exon

Sdha
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sdha
product: succinate dehydrogenase complex flavoprotein subunit A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368477.1
SIO_010081: Sdha
subclass of: SO_0000673
so part of: Sdha
location: join(118437..118576,122443..122529,124002..124163,126919..127062,127438..127602,129891..130039,131768..131892,133052..133220,134254..134449,135131..135302,141141..141259,144688..144799,145198..145328,147082..147195,150658..150965)
location: region:118437-150965:1
so has part: feature:118437-118576:1:exon
so has part: feature:122443-122529:1:exon
so has part: feature:124002-124163:1:exon
so has part: feature:126919-127062:1:exon
so has part: feature:127438-127602:1:exon
so has part: feature:129891-130039:1:exon
so has part: feature:131768-131892:1:exon
so has part: feature:133052-133220:1:exon
so has part: feature:134254-134449:1:exon
so has part: feature:135131-135302:1:exon
so has part: feature:141141-141259:1:exon
so has part: feature:144688-144799:1:exon
so has part: feature:145198-145328:1:exon
so has part: feature:147082-147195:1:exon
so has part: feature:150658-150965:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118437-118576:1:exon

position:118576:1
position: 118576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:122443-122529:1:exon

position:122443:1
position: 122443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122529:1
position: 122529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:124002-124163:1:exon

position:124002:1
position: 124002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124163:1
position: 124163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:126919-127062:1:exon

position:126919:1
position: 126919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127062:1
position: 127062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:127438-127602:1:exon

position:127438:1
position: 127438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127602:1
position: 127602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:129891-130039:1:exon

position:129891:1
position: 129891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130039:1
position: 130039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:131768-131892:1:exon

position:131768:1
position: 131768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131892:1
position: 131892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:133052-133220:1:exon

position:133052:1
position: 133052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133220:1
position: 133220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:134254-134449:1:exon

position:134254:1
position: 134254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134449:1
position: 134449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:135131-135302:1:exon

position:135131:1
position: 135131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135302:1
position: 135302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:141141-141259:1:exon

position:141141:1
position: 141141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141259:1
position: 141259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:144688-144799:1:exon

position:144688:1
position: 144688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144799:1
position: 144799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:145198-145328:1:exon

position:145198:1
position: 145198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145328:1
position: 145328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:147082-147195:1:exon

position:147082:1
position: 147082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147195:1
position: 147195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:150658-150965:1:exon

position:150658:1
position: 150658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sdha
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sdha
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
translation: MAGLGALSRVLRARRLSLARAWPRAFQTRIQGFHFTVGGSKRASAKVTDAISTQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACLTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEEGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEDGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTVEIREGRGCGPEKDHVYLQLHHLPPEQLAMRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVLKHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESCRPGDKVPPIKANAGEESVMNLDKLRFADGNIRTSELRLSMQKSMQSHAAVFREGSVLQEGCKKISQLYGDLNHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDEYDYSKPTQGQQKRPFEEHWRKHTLSYVDVKTGKVNLEYRPVIDKTLNETDCATVPPAIRSY
SIO_010081: Sdha
subclass of: SO_0000673
so part of: Sdha
location: join(118514..118576,122443..122529,124002..124163,126919..127062,127438..127602,129891..130039,131768..131892,133052..133220,134254..134449,135131..135302,141141..141259,144688..144799,145198..145328,147082..147195,150658..150744)
location: region:118514-150744:1
so has part: feature:118514-118576:1:exon
so has part: feature:122443-122529:1:exon
so has part: feature:124002-124163:1:exon
so has part: feature:126919-127062:1:exon
so has part: feature:127438-127602:1:exon
so has part: feature:129891-130039:1:exon
so has part: feature:131768-131892:1:exon
so has part: feature:133052-133220:1:exon
so has part: feature:134254-134449:1:exon
so has part: feature:135131-135302:1:exon
so has part: feature:141141-141259:1:exon
so has part: feature:144688-144799:1:exon
so has part: feature:145198-145328:1:exon
so has part: feature:147082-147195:1:exon
so has part: feature:150658-150744:1:exon

XP_048224434.1
type: Protein
SIO_000068: ncbiprotein

position:118514:1
position: 118514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150744:1
position: 150744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118514-118576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:122443-122529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:124002-124163:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126919-127062:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127438-127602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129891-130039:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131768-131892:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133052-133220:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:134254-134449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:135131-135302:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:141141-141259:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:144688-144799:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:145198-145328:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147082-147195:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:150658-150744:1:exon

LOC125367788
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 124737..125818
location: region:124737-125818:1
so has part: feature:124737-125818:1:exon
subclass of: SO_0000011

125367788
type: Gene
SIO_000068: ncbigene

position:124737:1
position: 124737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125818:1
position: 125818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124737-125818:1:exon

LOC125367788
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125367788
product: uncharacterized LOC125367788
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007214155.1
SIO_010081: LOC125367788
subclass of: SO_0000673
so part of: LOC125367788
location: join(124737..125292,125506..125818)
location: region:124737-125818:1
so has part: feature:124737-125292:1:exon
so has part: feature:125506-125818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124737-125292:1:exon

position:125292:1
position: 125292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125506-125818:1:exon

position:125506:1
position: 125506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pdcd6
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Pdcd6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 155166..174914
location: region:155166-174914:1
so has part: feature:155166-174914:1:exon
subclass of: SO_0000010

125367787
type: Gene
SIO_000068: ncbigene

position:155166:1
position: 155166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174914:1
position: 174914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155166-174914:1:exon

Pdcd6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pdcd6
product: programmed cell death 6, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368482.1
SIO_010081: Pdcd6
subclass of: SO_0000673
so part of: Pdcd6
location: join(155166..155329,156409..156470,161567..161611,165037..165189,170694..170796,174335..174914)
location: region:155166-174914:1
so has part: feature:155166-155329:1:exon
so has part: feature:156409-156470:1:exon
so has part: feature:161567-161611:1:exon
so has part: feature:165037-165189:1:exon
so has part: feature:170694-170796:1:exon
so has part: feature:174335-174914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155166-155329:1:exon

position:155329:1
position: 155329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156409-156470:1:exon

position:156409:1
position: 156409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156470:1
position: 156470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:161567-161611:1:exon

position:161567:1
position: 161567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161611:1
position: 161611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:165037-165189:1:exon

position:165037:1
position: 165037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165189:1
position: 165189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:170694-170796:1:exon

position:170694:1
position: 170694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170796:1
position: 170796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:174335-174914:1:exon

position:174335:1
position: 174335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pdcd6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pdcd6
product: programmed cell death 6, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368481.1
SIO_010081: Pdcd6
subclass of: SO_0000673
so part of: Pdcd6
location: join(155167..155329,156409..156470,161567..161611,165037..165195,170694..170796,174335..174914)
location: region:155167-174914:1
so has part: feature:155167-155329:1:exon
so has part: feature:156409-156470:1:exon
so has part: feature:161567-161611:1:exon
so has part: feature:165037-165195:1:exon
so has part: feature:170694-170796:1:exon
so has part: feature:174335-174914:1:exon

position:155167:1
position: 155167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155167-155329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156409-156470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161567-161611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165037-165195:1:exon

position:165195:1
position: 165195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:170694-170796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174335-174914:1:exon

Pdcd6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pdcd6
product: programmed cell death 6, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368480.1
SIO_010081: Pdcd6
subclass of: SO_0000673
so part of: Pdcd6
location: join(155168..155329,156409..156470,161567..161611,165037..165189,170687..170796,174335..174914)
location: region:155168-174914:1
so has part: feature:155168-155329:1:exon
so has part: feature:156409-156470:1:exon
so has part: feature:161567-161611:1:exon
so has part: feature:165037-165189:1:exon
so has part: feature:170687-170796:1:exon
so has part: feature:174335-174914:1:exon

position:155168:1
position: 155168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155168-155329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156409-156470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161567-161611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165037-165189:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170687-170796:1:exon

position:170687:1
position: 170687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:174335-174914:1:exon

Pdcd6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pdcd6
product: programmed cell death 6, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368479.1
SIO_010081: Pdcd6
subclass of: SO_0000673
so part of: Pdcd6
location: join(155169..155329,156409..156470,161567..161611,165037..165195,170687..170796,174335..174914)
location: region:155169-174914:1
so has part: feature:155169-155329:1:exon
so has part: feature:156409-156470:1:exon
so has part: feature:161567-161611:1:exon
so has part: feature:165037-165195:1:exon
so has part: feature:170687-170796:1:exon
so has part: feature:174335-174914:1:exon

position:155169:1
position: 155169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155169-155329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156409-156470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161567-161611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165037-165195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170687-170796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174335-174914:1:exon

Pdcd6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pdcd6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 6 isoform X1
translation: MAAYSYRPGAGPSPAAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV
SIO_010081: Pdcd6
subclass of: SO_0000673
so part of: Pdcd6
location: join(155235..155329,156409..156470,161567..161611,165037..165195,170687..170796,174335..174433)
location: region:155235-174433:1
so has part: feature:155235-155329:1:exon
so has part: feature:156409-156470:1:exon
so has part: feature:161567-161611:1:exon
so has part: feature:165037-165195:1:exon
so has part: feature:170687-170796:1:exon
so has part: feature:174335-174433:1:exon

XP_048224436.1
type: Protein
SIO_000068: ncbiprotein

position:155235:1
position: 155235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174433:1
position: 174433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155235-155329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156409-156470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161567-161611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165037-165195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170687-170796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174335-174433:1:exon

Pdcd6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pdcd6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 6 isoform X2
translation: MAAYSYRPGAGPSPAAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV
SIO_010081: Pdcd6
subclass of: SO_0000673
so part of: Pdcd6
location: join(155235..155329,156409..156470,161567..161611,165037..165189,170687..170796,174335..174433)
location: region:155235-174433:1
so has part: feature:155235-155329:1:exon
so has part: feature:156409-156470:1:exon
so has part: feature:161567-161611:1:exon
so has part: feature:165037-165189:1:exon
so has part: feature:170687-170796:1:exon
so has part: feature:174335-174433:1:exon

XP_048224437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155235-155329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156409-156470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161567-161611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165037-165189:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170687-170796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174335-174433:1:exon

Pdcd6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pdcd6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 6 isoform X3
translation: MAAYSYRPGAGPSPAAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGSLTSSMTSSSESLTDKDEDRLHLMTSSRAASSCRG
SIO_010081: Pdcd6
subclass of: SO_0000673
so part of: Pdcd6
location: join(155235..155329,156409..156470,161567..161611,165037..165195,170694..170796,174335..174341)
location: region:155235-174341:1
so has part: feature:155235-155329:1:exon
so has part: feature:156409-156470:1:exon
so has part: feature:161567-161611:1:exon
so has part: feature:165037-165195:1:exon
so has part: feature:170694-170796:1:exon
so has part: feature:174335-174341:1:exon

XP_048224438.1
type: Protein
SIO_000068: ncbiprotein

position:174341:1
position: 174341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155235-155329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156409-156470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161567-161611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165037-165195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170694-170796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174335-174341:1:exon

Pdcd6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pdcd6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 6 isoform X4
translation: MAAYSYRPGAGPSPAAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGSLTSSMTSSSESLTDKDEDRLHLMTSSRAASSCRG
SIO_010081: Pdcd6
subclass of: SO_0000673
so part of: Pdcd6
location: join(155235..155329,156409..156470,161567..161611,165037..165189,170694..170796,174335..174341)
location: region:155235-174341:1
so has part: feature:155235-155329:1:exon
so has part: feature:156409-156470:1:exon
so has part: feature:161567-161611:1:exon
so has part: feature:165037-165189:1:exon
so has part: feature:170694-170796:1:exon
so has part: feature:174335-174341:1:exon

XP_048224439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155235-155329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156409-156470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161567-161611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165037-165189:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170694-170796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174335-174341:1:exon

LOC125367521
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(185462..185854)
location: region:185462-185854:-1
so has part: feature:185462-185854:-1:exon

125367521
type: Gene
SIO_000068: ncbigene

position:185462:-1
position: 185462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185854:-1
position: 185854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185462-185854:-1:exon

LOC125367521
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125367521
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125367521
subclass of: SO_0000673
so part of: LOC125367521
location: complement(185462..185854)
location: region:185462-185854:-1
so has part: feature:185462-185854:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185462-185854:-1:exon

Ahrr
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ahrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 191466..244779
location: region:191466-244779:1
so has part: feature:191466-244779:1:exon
subclass of: SO_0000010

125367862
type: Gene
SIO_000068: ncbigene

position:191466:1
position: 191466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244779:1
position: 244779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191466-244779:1:exon

Ahrr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ahrr
product: aryl hydrocarbon receptor repressor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048368580.1
SIO_010081: Ahrr
subclass of: SO_0000673
so part of: Ahrr
location: join(191466..191527,197558..197739,215362..215456,231353..231442,234456..234585,235885..236018,239513..239700,242666..242727,242951..243092,243801..244779)
location: region:191466-244779:1
so has part: feature:191466-191527:1:exon
so has part: feature:197558-197739:1:exon
so has part: feature:215362-215456:1:exon
so has part: feature:231353-231442:1:exon
so has part: feature:234456-234585:1:exon
so has part: feature:235885-236018:1:exon
so has part: feature:239513-239700:1:exon
so has part: feature:242666-242727:1:exon
so has part: feature:242951-243092:1:exon
so has part: feature:243801-244779:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:191466-191527:1:exon

position:191527:1
position: 191527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197558-197739:1:exon

position:197558:1
position: 197558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197739:1
position: 197739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:215362-215456:1:exon

position:215362:1
position: 215362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215456:1
position: 215456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:231353-231442:1:exon

position:231353:1
position: 231353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231442:1
position: 231442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:234456-234585:1:exon

position:234456:1
position: 234456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234585:1
position: 234585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:235885-236018:1:exon

position:235885:1
position: 235885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236018:1
position: 236018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:239513-239700:1:exon

position:239513:1
position: 239513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239700:1
position: 239700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:242666-242727:1:exon

position:242666:1
position: 242666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242727:1
position: 242727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:242951-243092:1:exon

position:242951:1
position: 242951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243092:1
position: 243092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:243801-244779:1:exon

position:243801:1
position: 243801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ahrr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ahrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor repressor
translation: MIPPGECTYAGRKRRKPVQKRRPAMGAEKSNPSKRHRDRLNAELDHLASLLPFPPDIISKLDKLSVLRLSVSYLRVKSFFQALQETQWPAVTLSSGESPSGGRPVQEGQLMLESLHGFALVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIHVEDRQDFCRQLHWAMDPPQAPCAQPQCSETDNIMLEKLLRTQEGTSGLLPEYSAFLTRCFVCRVRCLLDSTSGFLTMQFQGKLKLLFGQKKKGPSGAVLPPPLSLFCTVVPVISPSAAEMKMSSTFLRARHGSDMDPRSKATTSLYELELHRKSGYFAGRSNEENSIPEFRAQMDSSCLARSLARAPCLCFRGNSDFILNPKWGAGDQEEEGQERMPSAYAKAKRQKEMHRNNCHSETSVPMRPLNWVTEPRSPEDGSKLRLEPGKKNPCPMCAAPHSSCVSYPGTQSMSSASGLATTFSDSLGSPLSAYCSQINRPLRDVHQAQVYPSTYHVPHSTLGTRLPPSGVQCFMAGGFSIEGTNLPGLPVSTGPPCSPLSLEVPIKMENDAEAQDMAGGCPPSRVCLGSRAVAKRHVVTFSAKVHLKTEPGYQPQACTQPPECSVLGAHLHKRATAGPCRELAPLYPAPCSCREQWAPHHLCTPGHRESQHNPLGCDGRAPGAGPVVKCEPLDSLSWASPGQGAVSEMFPKVPL
SIO_010081: Ahrr
subclass of: SO_0000673
so part of: Ahrr
location: join(191466..191527,197558..197739,215362..215456,231353..231442,234456..234585,235885..236018,239513..239700,242666..242727,242951..243092,243801..244779)
location: region:191466-244779:1
so has part: feature:191466-191527:1:exon
so has part: feature:197558-197739:1:exon
so has part: feature:215362-215456:1:exon
so has part: feature:231353-231442:1:exon
so has part: feature:234456-234585:1:exon
so has part: feature:235885-236018:1:exon
so has part: feature:239513-239700:1:exon
so has part: feature:242666-242727:1:exon
so has part: feature:242951-243092:1:exon
so has part: feature:243801-244779:1:exon

XP_048224537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191466-191527:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197558-197739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215362-215456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231353-231442:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234456-234585:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:235885-236018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:239513-239700:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242666-242727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242951-243092:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:243801-244779:1:exon

LOC125367717
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367717
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 232655..233204
location: region:232655-233204:1
so has part: feature:232655-233204:1:exon

125367717
type: Gene
SIO_000068: ncbigene

position:232655:1
position: 232655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233204:1
position: 233204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232655-233204:1:exon

LOC125367717
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125367717
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125367717
subclass of: SO_0000673
so part of: LOC125367717
location: 232655..233204
location: region:232655-233204:1
so has part: feature:232655-233204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:232655-233204:1:exon

Exoc3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Exoc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 250672..275573
location: region:250672-275573:1
so has part: feature:250672-275573:1:exon
subclass of: SO_0000010

125367496
type: Gene
SIO_000068: ncbigene

position:250672:1
position: 250672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275573:1
position: 275573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250672-275573:1:exon

Exoc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Exoc3
product: exocyst complex component 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368182.1
SIO_010081: Exoc3
subclass of: SO_0000673
so part of: Exoc3
location: join(250672..250825,252352..252543,254364..254583,257576..258257,259858..259975,260707..260832,264381..264481,266782..266892,266967..267117,268420..268542,272972..273133,273667..273794,275322..275573)
location: region:250672-275573:1
so has part: feature:250672-250825:1:exon
so has part: feature:252352-252543:1:exon
so has part: feature:254364-254583:1:exon
so has part: feature:257576-258257:1:exon
so has part: feature:259858-259975:1:exon
so has part: feature:260707-260832:1:exon
so has part: feature:264381-264481:1:exon
so has part: feature:266782-266892:1:exon
so has part: feature:266967-267117:1:exon
so has part: feature:268420-268542:1:exon
so has part: feature:272972-273133:1:exon
so has part: feature:273667-273794:1:exon
so has part: feature:275322-275573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250672-250825:1:exon

position:250825:1
position: 250825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:252352-252543:1:exon

position:252352:1
position: 252352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252543:1
position: 252543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:254364-254583:1:exon

position:254364:1
position: 254364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254583:1
position: 254583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:257576-258257:1:exon

position:257576:1
position: 257576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258257:1
position: 258257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:259858-259975:1:exon

position:259858:1
position: 259858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259975:1
position: 259975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:260707-260832:1:exon

position:260707:1
position: 260707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260832:1
position: 260832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:264381-264481:1:exon

position:264381:1
position: 264381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264481:1
position: 264481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:266782-266892:1:exon

position:266782:1
position: 266782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266892:1
position: 266892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:266967-267117:1:exon

position:266967:1
position: 266967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267117:1
position: 267117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:268420-268542:1:exon

position:268420:1
position: 268420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268542:1
position: 268542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:272972-273133:1:exon

position:272972:1
position: 272972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273133:1
position: 273133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:273667-273794:1:exon

position:273667:1
position: 273667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273794:1
position: 273794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:275322-275573:1:exon

position:275322:1
position: 275322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Exoc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Exoc3
product: exocyst complex component 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368183.1
SIO_010081: Exoc3
subclass of: SO_0000673
so part of: Exoc3
location: join(251159..251176,252352..252543,254364..254583,257576..258257,259858..259975,260707..260832,264381..264481,266782..266892,266967..267117,268420..268542,272972..273133,273667..273794,275322..275573)
location: region:251159-275573:1
so has part: feature:251159-251176:1:exon
so has part: feature:252352-252543:1:exon
so has part: feature:254364-254583:1:exon
so has part: feature:257576-258257:1:exon
so has part: feature:259858-259975:1:exon
so has part: feature:260707-260832:1:exon
so has part: feature:264381-264481:1:exon
so has part: feature:266782-266892:1:exon
so has part: feature:266967-267117:1:exon
so has part: feature:268420-268542:1:exon
so has part: feature:272972-273133:1:exon
so has part: feature:273667-273794:1:exon
so has part: feature:275322-275573:1:exon

position:251159:1
position: 251159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251159-251176:1:exon

position:251176:1
position: 251176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:252352-252543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254364-254583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257576-258257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259858-259975:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:260707-260832:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264381-264481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:266782-266892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:266967-267117:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:268420-268542:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272972-273133:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273667-273794:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:275322-275573:1:exon

Exoc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Exoc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exocyst complex component 3
translation: MTRAEILPTCLIMKETDREAVATAVQRVAGMLQRPDQLDKVEQYRRREARKKASVEARLKAAIQSQLDGVRTGLSQLHNALSDVKDIQQSLGDVSKDWRQSINTIESLKDVKDAVVQHSQLAAAVENLKNIFSVPEIVRETQDLIEQGALLQAHRKLMDLECSRDGLMCEQCRMDSGNTRDMALIHSYFGSTQGLSDELAKQLWMVLQRSLVTVRRDPTLLVSVVRIIEREEKIDRRILDRKKQTGFVPPGRPKNWKEKMFAILERTVTTRIEGTQADTRESDKMWLVRHLEIIRKYVLDDLVVAKNMMVQCFPPHYEIFKNLLNMYHQALSTRMQDLASEDLEANEIVSLLTWVLNTYTSAEMMGNVELAPEVDVSALEPLLSPKVVSELLDTYMSTLTSNIIAWLRKALETDRKDWSKETEPEADQDGYYQTTLPAIVFQMFEQNLQVAAQISEDLKTKVLVLCLQQMNSFLSRYKDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQTFKESIISLKRKYLKNEAEEAVCLSQPSMDGILDAIAKEGCSSLLEEVFLDLEQHLNELMTKKWLLGSNAVDIICVTVEDYFNDFAKIKKPYKKRMMAEAHRRMVVEYLRAIMQKRISFRSAEERKEGAEKMVREAEQLRFLFRKLASGFGEDVDGHCDTIVAVAEVIKLTDPSLLYLEVSTLVSKYPDIRDDHIGALLAVRGDASRDMKQTIMETLEQGPTQASPSYVPIFKEIVVPSLNVAKLLK
SIO_010081: Exoc3
subclass of: SO_0000673
so part of: Exoc3
location: join(252364..252543,254364..254583,257576..258257,259858..259975,260707..260832,264381..264481,266782..266892,266967..267117,268420..268542,272972..273133,273667..273794,275322..275493)
location: region:252364-275493:1
so has part: feature:252364-252543:1:exon
so has part: feature:254364-254583:1:exon
so has part: feature:257576-258257:1:exon
so has part: feature:259858-259975:1:exon
so has part: feature:260707-260832:1:exon
so has part: feature:264381-264481:1:exon
so has part: feature:266782-266892:1:exon
so has part: feature:266967-267117:1:exon
so has part: feature:268420-268542:1:exon
so has part: feature:272972-273133:1:exon
so has part: feature:273667-273794:1:exon
so has part: feature:275322-275493:1:exon

XP_048224139.1
type: Protein
SIO_000068: ncbiprotein

position:252364:1
position: 252364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275493:1
position: 275493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252364-252543:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254364-254583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:257576-258257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259858-259975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:260707-260832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264381-264481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:266782-266892:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:266967-267117:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268420-268542:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:272972-273133:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273667-273794:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:275322-275493:1:exon

Exoc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Exoc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exocyst complex component 3
translation: MTRAEILPTCLIMKETDREAVATAVQRVAGMLQRPDQLDKVEQYRRREARKKASVEARLKAAIQSQLDGVRTGLSQLHNALSDVKDIQQSLGDVSKDWRQSINTIESLKDVKDAVVQHSQLAAAVENLKNIFSVPEIVRETQDLIEQGALLQAHRKLMDLECSRDGLMCEQCRMDSGNTRDMALIHSYFGSTQGLSDELAKQLWMVLQRSLVTVRRDPTLLVSVVRIIEREEKIDRRILDRKKQTGFVPPGRPKNWKEKMFAILERTVTTRIEGTQADTRESDKMWLVRHLEIIRKYVLDDLVVAKNMMVQCFPPHYEIFKNLLNMYHQALSTRMQDLASEDLEANEIVSLLTWVLNTYTSAEMMGNVELAPEVDVSALEPLLSPKVVSELLDTYMSTLTSNIIAWLRKALETDRKDWSKETEPEADQDGYYQTTLPAIVFQMFEQNLQVAAQISEDLKTKVLVLCLQQMNSFLSRYKDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQTFKESIISLKRKYLKNEAEEAVCLSQPSMDGILDAIAKEGCSSLLEEVFLDLEQHLNELMTKKWLLGSNAVDIICVTVEDYFNDFAKIKKPYKKRMMAEAHRRMVVEYLRAIMQKRISFRSAEERKEGAEKMVREAEQLRFLFRKLASGFGEDVDGHCDTIVAVAEVIKLTDPSLLYLEVSTLVSKYPDIRDDHIGALLAVRGDASRDMKQTIMETLEQGPTQASPSYVPIFKEIVVPSLNVAKLLK
SIO_010081: Exoc3
subclass of: SO_0000673
so part of: Exoc3
location: join(252364..252543,254364..254583,257576..258257,259858..259975,260707..260832,264381..264481,266782..266892,266967..267117,268420..268542,272972..273133,273667..273794,275322..275493)
location: region:252364-275493:1
so has part: feature:252364-252543:1:exon
so has part: feature:254364-254583:1:exon
so has part: feature:257576-258257:1:exon
so has part: feature:259858-259975:1:exon
so has part: feature:260707-260832:1:exon
so has part: feature:264381-264481:1:exon
so has part: feature:266782-266892:1:exon
so has part: feature:266967-267117:1:exon
so has part: feature:268420-268542:1:exon
so has part: feature:272972-273133:1:exon
so has part: feature:273667-273794:1:exon
so has part: feature:275322-275493:1:exon

XP_048224140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252364-252543:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254364-254583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:257576-258257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259858-259975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:260707-260832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264381-264481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:266782-266892:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:266967-267117:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268420-268542:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:272972-273133:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273667-273794:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:275322-275493:1:exon

Slc9a3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Slc9a3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(279888..324936)
location: region:279888-324936:-1
so has part: feature:279888-324936:-1:exon
subclass of: SO_0000010

125367436
type: Gene
SIO_000068: ncbigene

position:279888:-1
position: 279888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324936:-1
position: 324936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279888-324936:-1:exon

Slc9a3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slc9a3
product: solute carrier family 9 member A3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048368098.1
SIO_010081: Slc9a3
subclass of: SO_0000673
so part of: Slc9a3
location: complement(join(279888..280275,281857..282106,282658..282771,283379..283451,283705..283881,284124..284253,284833..284948,287457..287586,289149..289219,289389..289478,289924..290126,290509..290729,291521..291698,292314..292392,293230..293390,295969..296271,324656..324936))
location: region:279888-324936:-1
so has part: feature:324656-324936:-1:exon
so has part: feature:295969-296271:-1:exon
so has part: feature:293230-293390:-1:exon
so has part: feature:292314-292392:-1:exon
so has part: feature:291521-291698:-1:exon
so has part: feature:290509-290729:-1:exon
so has part: feature:289924-290126:-1:exon
so has part: feature:289389-289478:-1:exon
so has part: feature:289149-289219:-1:exon
so has part: feature:287457-287586:-1:exon
so has part: feature:284833-284948:-1:exon
so has part: feature:284124-284253:-1:exon
so has part: feature:283705-283881:-1:exon
so has part: feature:283379-283451:-1:exon
so has part: feature:282658-282771:-1:exon
so has part: feature:281857-282106:-1:exon
so has part: feature:279888-280275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324656-324936:-1:exon

position:324656:-1
position: 324656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295969-296271:-1:exon

position:295969:-1
position: 295969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296271:-1
position: 296271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293230-293390:-1:exon

position:293230:-1
position: 293230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293390:-1
position: 293390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:292314-292392:-1:exon

position:292314:-1
position: 292314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292392:-1
position: 292392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:291521-291698:-1:exon

position:291521:-1
position: 291521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291698:-1
position: 291698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:290509-290729:-1:exon

position:290509:-1
position: 290509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290729:-1
position: 290729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:289924-290126:-1:exon

position:289924:-1
position: 289924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290126:-1
position: 290126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:289389-289478:-1:exon

position:289389:-1
position: 289389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289478:-1
position: 289478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:289149-289219:-1:exon

position:289149:-1
position: 289149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289219:-1
position: 289219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:287457-287586:-1:exon

position:287457:-1
position: 287457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287586:-1
position: 287586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:284833-284948:-1:exon

position:284833:-1
position: 284833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284948:-1
position: 284948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:284124-284253:-1:exon

position:284124:-1
position: 284124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284253:-1
position: 284253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:283705-283881:-1:exon

position:283705:-1
position: 283705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283881:-1
position: 283881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:283379-283451:-1:exon

position:283379:-1
position: 283379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283451:-1
position: 283451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:282658-282771:-1:exon

position:282658:-1
position: 282658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282771:-1
position: 282771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:281857-282106:-1:exon

position:281857:-1
position: 281857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282106:-1
position: 282106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:279888-280275:-1:exon

position:280275:-1
position: 280275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc9a3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slc9a3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 3 isoform X2
translation: MSGLGVRPAGGPPRLLALALALGGLPRARGVEEELDSGQGFQVVTFEWHHVQDPYIIALWILVASLAKIVFHLSHKVTRVIPESALLIVLGVVLGGIVWAADHIASFTLTPTVFFFYLLPPIVLDAGYFMPNRLFFGNLGTILLYAVIGTVWNAATTGLSLYGVFLSGLMGDLRIGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNEVLFIIVFGESLLNDAVTVVLYNVFESFVSLGGDNVTGVDCVKGIVSFFVVSLGGTLVGVIFAFLLSLVTRFTKHVRIIEPGFVFVISYLSYLTSEMLSLSAILAITFCGICCQKYVKANISEQSATTVRYTMKMLASGAETIIFMFLGISAVDPLIWTWNTAFVLLTLVFISVYRAIGVVLQTWILNRYRMVQLETIDQVVMSYGGLRGAVAYALVVLLDKKKVKEKDLFVSTTLIVVFFTVIFQGLTIKPLVQWLKVKRSEEREPKLNEKLHGRAFDHILSAIEDISGQIGHNYLRDKWSNFDRRFLSKVLMRRSAQKSRDRILNVFHELNLKDAISYVAEGERRGSLAFIRSPSTDNMVNVDFSTPRPSTVEASVSYLLRENVSAVCLDMQSLEQRRKSIRDTEDMVTHHTLQQYLYKPRQEYKHLYSRHELTPSEDEKQDKEIFHRTMRKRLESFKSAKLGINQNKKAAKLYKRERAQKRRNSSIPNGKLPVENPVHTFIIQEKDLELSEPEEAPDYQAEETSGGIEFLANVTKGVASDSPAGIDNPVFSPDEDLDPSIMSRVPPWLSPGETVVPSQRARVQIPHSPSNFRRLTPFRISNKSVDSFLLADGSEEWPHPAVPESTHM
SIO_010081: Slc9a3
subclass of: SO_0000673
so part of: Slc9a3
location: complement(join(280272..280275,281857..282106,282658..282771,283379..283451,283705..283881,284124..284253,284833..284948,287457..287586,289149..289219,289389..289478,289924..290126,290509..290729,291521..291698,292314..292392,293230..293390,295969..296271,324656..324863))
location: region:280272-324863:-1
so has part: feature:324656-324863:-1:exon
so has part: feature:295969-296271:-1:exon
so has part: feature:293230-293390:-1:exon
so has part: feature:292314-292392:-1:exon
so has part: feature:291521-291698:-1:exon
so has part: feature:290509-290729:-1:exon
so has part: feature:289924-290126:-1:exon
so has part: feature:289389-289478:-1:exon
so has part: feature:289149-289219:-1:exon
so has part: feature:287457-287586:-1:exon
so has part: feature:284833-284948:-1:exon
so has part: feature:284124-284253:-1:exon
so has part: feature:283705-283881:-1:exon
so has part: feature:283379-283451:-1:exon
so has part: feature:282658-282771:-1:exon
so has part: feature:281857-282106:-1:exon
so has part: feature:280272-280275:-1:exon

XP_048224055.1
type: Protein
SIO_000068: ncbiprotein

position:280272:-1
position: 280272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324863:-1
position: 324863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324656-324863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295969-296271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293230-293390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292314-292392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:291521-291698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:290509-290729:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289924-290126:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289389-289478:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289149-289219:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287457-287586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:284833-284948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:284124-284253:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:283705-283881:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:283379-283451:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:282658-282771:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:281857-282106:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:280272-280275:-1:exon

Slc9a3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slc9a3
product: solute carrier family 9 member A3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048368097.1
SIO_010081: Slc9a3
subclass of: SO_0000673
so part of: Slc9a3
location: complement(join(281357..282106,282658..282771,283379..283451,283705..283881,284124..284253,284833..284948,287457..287586,289149..289219,289389..289478,289924..290126,290509..290729,291521..291698,292314..292392,293230..293390,295969..296271,324656..324936))
location: region:281357-324936:-1
so has part: feature:324656-324936:-1:exon
so has part: feature:295969-296271:-1:exon
so has part: feature:293230-293390:-1:exon
so has part: feature:292314-292392:-1:exon
so has part: feature:291521-291698:-1:exon
so has part: feature:290509-290729:-1:exon
so has part: feature:289924-290126:-1:exon
so has part: feature:289389-289478:-1:exon
so has part: feature:289149-289219:-1:exon
so has part: feature:287457-287586:-1:exon
so has part: feature:284833-284948:-1:exon
so has part: feature:284124-284253:-1:exon
so has part: feature:283705-283881:-1:exon
so has part: feature:283379-283451:-1:exon
so has part: feature:282658-282771:-1:exon
so has part: feature:281357-282106:-1:exon

position:281357:-1
position: 281357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324656-324936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295969-296271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293230-293390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292314-292392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:291521-291698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:290509-290729:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289924-290126:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289389-289478:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289149-289219:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287457-287586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:284833-284948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:284124-284253:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:283705-283881:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:283379-283451:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:282658-282771:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:281357-282106:-1:exon

Slc9a3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slc9a3
product: solute carrier family 9 member A3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048368099.1
SIO_010081: Slc9a3
subclass of: SO_0000673
so part of: Slc9a3
location: complement(join(281357..282106,282658..282771,283379..283451,283705..283881,284124..284253,284833..284948,287457..287586,289149..289219,289389..289478,289924..290126,290509..290729,291521..291698,292314..292392,293230..293390,295969..296271,311373..311419,324656..324782))
location: region:281357-324782:-1
so has part: feature:324656-324782:-1:exon
so has part: feature:311373-311419:-1:exon
so has part: feature:295969-296271:-1:exon
so has part: feature:293230-293390:-1:exon
so has part: feature:292314-292392:-1:exon
so has part: feature:291521-291698:-1:exon
so has part: feature:290509-290729:-1:exon
so has part: feature:289924-290126:-1:exon
so has part: feature:289389-289478:-1:exon
so has part: feature:289149-289219:-1:exon
so has part: feature:287457-287586:-1:exon
so has part: feature:284833-284948:-1:exon
so has part: feature:284124-284253:-1:exon
so has part: feature:283705-283881:-1:exon
so has part: feature:283379-283451:-1:exon
so has part: feature:282658-282771:-1:exon
so has part: feature:281357-282106:-1:exon

position:324782:-1
position: 324782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324656-324782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311373-311419:-1:exon

position:311373:-1
position: 311373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311419:-1
position: 311419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:295969-296271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293230-293390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292314-292392:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291521-291698:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:290509-290729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289924-290126:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289389-289478:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289149-289219:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:287457-287586:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:284833-284948:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:284124-284253:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:283705-283881:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:283379-283451:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:282658-282771:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:281357-282106:-1:exon

Slc9a3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slc9a3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 3 isoform X1
translation: MSGLGVRPAGGPPRLLALALALGGLPRARGVEEELDSGQGFQVVTFEWHHVQDPYIIALWILVASLAKIVFHLSHKVTRVIPESALLIVLGVVLGGIVWAADHIASFTLTPTVFFFYLLPPIVLDAGYFMPNRLFFGNLGTILLYAVIGTVWNAATTGLSLYGVFLSGLMGDLRIGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNEVLFIIVFGESLLNDAVTVVLYNVFESFVSLGGDNVTGVDCVKGIVSFFVVSLGGTLVGVIFAFLLSLVTRFTKHVRIIEPGFVFVISYLSYLTSEMLSLSAILAITFCGICCQKYVKANISEQSATTVRYTMKMLASGAETIIFMFLGISAVDPLIWTWNTAFVLLTLVFISVYRAIGVVLQTWILNRYRMVQLETIDQVVMSYGGLRGAVAYALVVLLDKKKVKEKDLFVSTTLIVVFFTVIFQGLTIKPLVQWLKVKRSEEREPKLNEKLHGRAFDHILSAIEDISGQIGHNYLRDKWSNFDRRFLSKVLMRRSAQKSRDRILNVFHELNLKDAISYVAEGERRGSLAFIRSPSTDNMVNVDFSTPRPSTVEASVSYLLRENVSAVCLDMQSLEQRRKSIRDTEDMVTHHTLQQYLYKPRQEYKHLYSRHELTPSEDEKQDKEIFHRTMRKRLESFKSAKLGINQNKKAAKLYKRERAQKRRNSSIPNGKLPVENPVHTFIIQEKDLELSEPEEAPDYQAEETSGGIEFLANVTKGVASDSPAGIDNPVFSPDEDLDPSIMSRVPPWLSPGETVVPSQRARVQIPHSPSNFRRLTPFRISNKSVDSFLLADGSEEWPHPAVPESTHM
SIO_010081: Slc9a3
subclass of: SO_0000673
so part of: Slc9a3
location: complement(join(281853..282106,282658..282771,283379..283451,283705..283881,284124..284253,284833..284948,287457..287586,289149..289219,289389..289478,289924..290126,290509..290729,291521..291698,292314..292392,293230..293390,295969..296271,324656..324863))
location: region:281853-324863:-1
so has part: feature:324656-324863:-1:exon
so has part: feature:295969-296271:-1:exon
so has part: feature:293230-293390:-1:exon
so has part: feature:292314-292392:-1:exon
so has part: feature:291521-291698:-1:exon
so has part: feature:290509-290729:-1:exon
so has part: feature:289924-290126:-1:exon
so has part: feature:289389-289478:-1:exon
so has part: feature:289149-289219:-1:exon
so has part: feature:287457-287586:-1:exon
so has part: feature:284833-284948:-1:exon
so has part: feature:284124-284253:-1:exon
so has part: feature:283705-283881:-1:exon
so has part: feature:283379-283451:-1:exon
so has part: feature:282658-282771:-1:exon
so has part: feature:281853-282106:-1:exon

XP_048224054.1
type: Protein
SIO_000068: ncbiprotein

position:281853:-1
position: 281853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324656-324863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295969-296271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293230-293390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292314-292392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:291521-291698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:290509-290729:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289924-290126:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289389-289478:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289149-289219:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287457-287586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:284833-284948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:284124-284253:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:283705-283881:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:283379-283451:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:282658-282771:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:281853-282106:-1:exon

Slc9a3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slc9a3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 3 isoform X3
translation: MPNRLFFGNLGTILLYAVIGTVWNAATTGLSLYGVFLSGLMGDLRIGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNEVLFIIVFGESLLNDAVTVVLYNVFESFVSLGGDNVTGVDCVKGIVSFFVVSLGGTLVGVIFAFLLSLVTRFTKHVRIIEPGFVFVISYLSYLTSEMLSLSAILAITFCGICCQKYVKANISEQSATTVRYTMKMLASGAETIIFMFLGISAVDPLIWTWNTAFVLLTLVFISVYRAIGVVLQTWILNRYRMVQLETIDQVVMSYGGLRGAVAYALVVLLDKKKVKEKDLFVSTTLIVVFFTVIFQGLTIKPLVQWLKVKRSEEREPKLNEKLHGRAFDHILSAIEDISGQIGHNYLRDKWSNFDRRFLSKVLMRRSAQKSRDRILNVFHELNLKDAISYVAEGERRGSLAFIRSPSTDNMVNVDFSTPRPSTVEASVSYLLRENVSAVCLDMQSLEQRRKSIRDTEDMVTHHTLQQYLYKPRQEYKHLYSRHELTPSEDEKQDKEIFHRTMRKRLESFKSAKLGINQNKKAAKLYKRERAQKRRNSSIPNGKLPVENPVHTFIIQEKDLELSEPEEAPDYQAEETSGGIEFLANVTKGVASDSPAGIDNPVFSPDEDLDPSIMSRVPPWLSPGETVVPSQRARVQIPHSPSNFRRLTPFRISNKSVDSFLLADGSEEWPHPAVPESTHM
SIO_010081: Slc9a3
subclass of: SO_0000673
so part of: Slc9a3
location: complement(join(281853..282106,282658..282771,283379..283451,283705..283881,284124..284253,284833..284948,287457..287586,289149..289219,289389..289478,289924..290126,290509..290729,291521..291698,292314..292392,293230..293390,295969..296092))
location: region:281853-296092:-1
so has part: feature:295969-296092:-1:exon
so has part: feature:293230-293390:-1:exon
so has part: feature:292314-292392:-1:exon
so has part: feature:291521-291698:-1:exon
so has part: feature:290509-290729:-1:exon
so has part: feature:289924-290126:-1:exon
so has part: feature:289389-289478:-1:exon
so has part: feature:289149-289219:-1:exon
so has part: feature:287457-287586:-1:exon
so has part: feature:284833-284948:-1:exon
so has part: feature:284124-284253:-1:exon
so has part: feature:283705-283881:-1:exon
so has part: feature:283379-283451:-1:exon
so has part: feature:282658-282771:-1:exon
so has part: feature:281853-282106:-1:exon

XP_048224056.1
type: Protein
SIO_000068: ncbiprotein

position:296092:-1
position: 296092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295969-296092:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293230-293390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:292314-292392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291521-291698:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290509-290729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289924-290126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289389-289478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289149-289219:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287457-287586:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:284833-284948:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:284124-284253:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:283705-283881:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:283379-283451:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:282658-282771:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:281853-282106:-1:exon

LOC125367438
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367438
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 305164..308378
location: region:305164-308378:1
so has part: feature:305164-308378:1:exon
subclass of: SO_0000011

125367438
type: Gene
SIO_000068: ncbigene

position:305164:1
position: 305164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308378:1
position: 308378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305164-308378:1:exon

LOC125367438
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125367438
product: uncharacterized LOC125367438
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007214085.1
SIO_010081: LOC125367438
subclass of: SO_0000673
so part of: LOC125367438
location: join(305164..305326,307049..307052,308368..308378)
location: region:305164-308378:1
so has part: feature:305164-305326:1:exon
so has part: feature:307049-307052:1:exon
so has part: feature:308368-308378:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:305164-305326:1:exon

position:305326:1
position: 305326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307049-307052:1:exon

position:307049:1
position: 307049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307052:1
position: 307052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308368-308378:1:exon

position:308368:1
position: 308368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cep72
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Cep72
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 367916..391894
location: region:367916-391894:1
so has part: feature:367916-391894:1:exon
subclass of: SO_0000010

125367662
type: Gene
SIO_000068: ncbigene

position:367916:1
position: 367916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391894:1
position: 391894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367916-391894:1:exon

Cep72
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cep72
product: centrosomal protein 72, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048368341.1
SIO_010081: Cep72
subclass of: SO_0000673
so part of: Cep72
location: join(367916..367994,370053..370180,371256..371448,374062..374170,375920..376098,379084..379272,380861..381159,382002..382140,382835..383031,386111..386237,387751..387862,391109..391894)
location: region:367916-391894:1
so has part: feature:367916-367994:1:exon
so has part: feature:370053-370180:1:exon
so has part: feature:371256-371448:1:exon
so has part: feature:374062-374170:1:exon
so has part: feature:375920-376098:1:exon
so has part: feature:379084-379272:1:exon
so has part: feature:380861-381159:1:exon
so has part: feature:382002-382140:1:exon
so has part: feature:382835-383031:1:exon
so has part: feature:386111-386237:1:exon
so has part: feature:387751-387862:1:exon
so has part: feature:391109-391894:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367916-367994:1:exon

position:367994:1
position: 367994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370053-370180:1:exon

position:370053:1
position: 370053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370180:1
position: 370180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:371256-371448:1:exon

position:371256:1
position: 371256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371448:1
position: 371448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:374062-374170:1:exon

position:374062:1
position: 374062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374170:1
position: 374170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:375920-376098:1:exon

position:375920:1
position: 375920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376098:1
position: 376098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:379084-379272:1:exon

position:379084:1
position: 379084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379272:1
position: 379272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:380861-381159:1:exon

position:380861:1
position: 380861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381159:1
position: 381159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:382002-382140:1:exon

position:382002:1
position: 382002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382140:1
position: 382140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:382835-383031:1:exon

position:382835:1
position: 382835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383031:1
position: 383031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:386111-386237:1:exon

position:386111:1
position: 386111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386237:1
position: 386237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:387751-387862:1:exon

position:387751:1
position: 387751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387862:1
position: 387862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:391109-391894:1:exon

position:391109:1
position: 391109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cep72
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cep72
product: centrosomal protein 72, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048368342.1
SIO_010081: Cep72
subclass of: SO_0000673
so part of: Cep72
location: join(367916..367994,370053..370180,371256..371448,374062..374170,375920..376098,380861..381159,382002..382140,382835..383031,386111..386237,387751..387862,391109..391894)
location: region:367916-391894:1
so has part: feature:367916-367994:1:exon
so has part: feature:370053-370180:1:exon
so has part: feature:371256-371448:1:exon
so has part: feature:374062-374170:1:exon
so has part: feature:375920-376098:1:exon
so has part: feature:380861-381159:1:exon
so has part: feature:382002-382140:1:exon
so has part: feature:382835-383031:1:exon
so has part: feature:386111-386237:1:exon
so has part: feature:387751-387862:1:exon
so has part: feature:391109-391894:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367916-367994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370053-370180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:371256-371448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:374062-374170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375920-376098:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380861-381159:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:382002-382140:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:382835-383031:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:386111-386237:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:387751-387862:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:391109-391894:1:exon

Cep72
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cep72
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 72 kDa isoform X1
translation: MAPGPRLVLCEETVRERSGFGPHRDLAELQSLSVPGTYQEKITHLGNSLMHLTGLKSLDLSRNSLVSLEGIQYLISLESLNLYYNCISSLAEVFRLHSLTELQEVDFRLNPVVKNESDYRLFVVHMLPKLRQLDDRPVRESERKASQLHFAPEDLPHSKESFSATLTIGRPHHSRARCTDALAKKCLVMDEDDEAVLNLIAECEWDLSNPPGSTSTSQKELEADLQRPQESRHVFSPPSIQHQCGDSVRRGHEKKKGSFRGCCPGQPPQDEYCGELPPQHGHGLHICFIPRPDSMDGEDSASSSQMPSLSSQKVLSPLPVCEKYRKRRMPGGRFQVLSDRECLNSLDRPDGPTSLEESLSRQDSSEVRVAFSHSEAIATEEQTSHGPSDARVLSPRPRSAAMPARRAALETALLGSLLDLVDRCWSGSGSLQSNETFLAQAKHILSSVPEFAAAQDSVSLGSEGISYLALENKSLQSRLAEQQQQCTTMMSEVTAELSKARKEMDTLRQHLDKSLEENSSLKSLLFSMKKEVKNADTSTALHLQITALETSVKQLSGEVVELKQHLEHYDRIQELTQMLQESHSSLVSTNEHLLQELSHARAQHREEMEQMHWSFQEFKKTTALFPTHSAHPGGHQSC
SIO_010081: Cep72
subclass of: SO_0000673
so part of: Cep72
location: join(367916..367994,370053..370180,371256..371448,374062..374170,375920..376098,379084..379272,380861..381159,382002..382140,382835..383031,386111..386237,387751..387862,391109..391274)
location: region:367916-391274:1
so has part: feature:367916-367994:1:exon
so has part: feature:370053-370180:1:exon
so has part: feature:371256-371448:1:exon
so has part: feature:374062-374170:1:exon
so has part: feature:375920-376098:1:exon
so has part: feature:379084-379272:1:exon
so has part: feature:380861-381159:1:exon
so has part: feature:382002-382140:1:exon
so has part: feature:382835-383031:1:exon
so has part: feature:386111-386237:1:exon
so has part: feature:387751-387862:1:exon
so has part: feature:391109-391274:1:exon

XP_048224298.1
type: Protein
SIO_000068: ncbiprotein

position:391274:1
position: 391274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367916-367994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370053-370180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:371256-371448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:374062-374170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375920-376098:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379084-379272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380861-381159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:382002-382140:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:382835-383031:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:386111-386237:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:387751-387862:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:391109-391274:1:exon

Cep72
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cep72
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 72 kDa isoform X2
translation: MAPGPRLVLCEETVRERSGFGPHRDLAELQSLSVPGTYQEKITHLGNSLMHLTGLKSLDLSRNSLVSLEGIQYLISLESLNLYYNCISSLAEVFRLHSLTELQEVDFRLNPVVKNESDYRLFVVHMLPKLRQLDDRPVRESERKASQLHFAPEDLPHSKESFSATLTIGRPHHSRARCTDALAKKCLVMDEDDEAVLNLIAECEWDLSNPPGSTSTSQKELEADLQRPQDSMDGEDSASSSQMPSLSSQKVLSPLPVCEKYRKRRMPGGRFQVLSDRECLNSLDRPDGPTSLEESLSRQDSSEVRVAFSHSEAIATEEQTSHGPSDARVLSPRPRSAAMPARRAALETALLGSLLDLVDRCWSGSGSLQSNETFLAQAKHILSSVPEFAAAQDSVSLGSEGISYLALENKSLQSRLAEQQQQCTTMMSEVTAELSKARKEMDTLRQHLDKSLEENSSLKSLLFSMKKEVKNADTSTALHLQITALETSVKQLSGEVVELKQHLEHYDRIQELTQMLQESHSSLVSTNEHLLQELSHARAQHREEMEQMHWSFQEFKKTTALFPTHSAHPGGHQSC
SIO_010081: Cep72
subclass of: SO_0000673
so part of: Cep72
location: join(367916..367994,370053..370180,371256..371448,374062..374170,375920..376098,380861..381159,382002..382140,382835..383031,386111..386237,387751..387862,391109..391274)
location: region:367916-391274:1
so has part: feature:367916-367994:1:exon
so has part: feature:370053-370180:1:exon
so has part: feature:371256-371448:1:exon
so has part: feature:374062-374170:1:exon
so has part: feature:375920-376098:1:exon
so has part: feature:380861-381159:1:exon
so has part: feature:382002-382140:1:exon
so has part: feature:382835-383031:1:exon
so has part: feature:386111-386237:1:exon
so has part: feature:387751-387862:1:exon
so has part: feature:391109-391274:1:exon

XP_048224299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367916-367994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370053-370180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:371256-371448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:374062-374170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375920-376098:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380861-381159:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:382002-382140:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:382835-383031:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:386111-386237:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:387751-387862:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:391109-391274:1:exon

LOC125367700
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(395683..418286)
location: region:395683-418286:-1
so has part: feature:395683-418286:-1:exon
subclass of: SO_0000010

125367700
type: Gene
SIO_000068: ncbigene

position:395683:-1
position: 395683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418286:-1
position: 418286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395683-418286:-1:exon

LOC125367700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125367700
product: tubulin polymerization promoting protein
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368404.1
SIO_010081: LOC125367700
subclass of: SO_0000673
so part of: LOC125367700
location: complement(join(395683..398203,398461..398614,406584..406904,418240..418286))
location: region:395683-418286:-1
so has part: feature:418240-418286:-1:exon
so has part: feature:406584-406904:-1:exon
so has part: feature:398461-398614:-1:exon
so has part: feature:395683-398203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:418240-418286:-1:exon

position:418240:-1
position: 418240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:406584-406904:-1:exon

position:406584:-1
position: 406584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406904:-1
position: 406904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:398461-398614:-1:exon

position:398461:-1
position: 398461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398614:-1
position: 398614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:395683-398203:-1:exon

position:398203:-1
position: 398203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125367700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125367700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin polymerization-promoting protein
translation: MAECKPKPAKSANRTPPKSPGDPAREKAAKRLSLESEGGNEGAAAAPSELSALEEAFRRFAVHGDTRASGREMHGKNWSKLCKDCHVIDGKNVTVTDVDIVFSKIKGKSCRTITFEQFQEALEELARKRFKDKSSEDAVREVHRLIEGRSPVISGVTKTVSSPTVSRLTDTTKFTGSHKERFDPSGKGKGKAGRVDLVDESGYVPGYKHAGTYDQKVQGGK
SIO_010081: LOC125367700
subclass of: SO_0000673
so part of: LOC125367700
location: complement(join(398009..398203,398461..398614,406584..406900))
location: region:398009-406900:-1
so has part: feature:406584-406900:-1:exon
so has part: feature:398461-398614:-1:exon
so has part: feature:398009-398203:-1:exon

XP_048224361.1
type: Protein
SIO_000068: ncbiprotein

position:398009:-1
position: 398009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406900:-1
position: 406900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406584-406900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:398461-398614:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398009-398203:-1:exon

LOC125367721
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(421354..443334)
location: region:421354-443334:-1
so has part: feature:421354-443334:-1:exon
subclass of: SO_0000010

125367721
type: Gene
SIO_000068: ncbigene

position:421354:-1
position: 421354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443334:-1
position: 443334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421354-443334:-1:exon

LOC125367721
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125367721
product: palmitoyltransferase ZDHHC11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048368418.1
SIO_010081: LOC125367721
subclass of: SO_0000673
so part of: LOC125367721
location: complement(join(421354..421904,423051..423153,425585..425622,428388..428500,431617..431772,433338..433462,435745..435846,436640..436818,440125..440346,441427..441526,443180..443334))
location: region:421354-443334:-1
so has part: feature:443180-443334:-1:exon
so has part: feature:441427-441526:-1:exon
so has part: feature:440125-440346:-1:exon
so has part: feature:436640-436818:-1:exon
so has part: feature:435745-435846:-1:exon
so has part: feature:433338-433462:-1:exon
so has part: feature:431617-431772:-1:exon
so has part: feature:428388-428500:-1:exon
so has part: feature:425585-425622:-1:exon
so has part: feature:423051-423153:-1:exon
so has part: feature:421354-421904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443180-443334:-1:exon

position:443180:-1
position: 443180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441427-441526:-1:exon

position:441427:-1
position: 441427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441526:-1
position: 441526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:440125-440346:-1:exon

position:440125:-1
position: 440125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440346:-1
position: 440346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:436640-436818:-1:exon

position:436640:-1
position: 436640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436818:-1
position: 436818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:435745-435846:-1:exon

position:435745:-1
position: 435745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435846:-1
position: 435846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:433338-433462:-1:exon

position:433338:-1
position: 433338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433462:-1
position: 433462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:431617-431772:-1:exon

position:431617:-1
position: 431617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431772:-1
position: 431772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:428388-428500:-1:exon

position:428388:-1
position: 428388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428500:-1
position: 428500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:425585-425622:-1:exon

position:425585:-1
position: 425585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425622:-1
position: 425622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:423051-423153:-1:exon

position:423051:-1
position: 423051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423153:-1
position: 423153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:421354-421904:-1:exon

position:421904:-1
position: 421904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125367721
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125367721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC11-like
translation: MDLCGRSQRQVLPEARDAAVKRTQPRPLSRVNGWSLPLHIFQAVSCTMYLVLSFITFGIFIPFLPDGGKYAAYTVVGGLFLFHLIVHLITITIDPADPNVRLKKSYSQPVPTFDRSKHGHVIQNQYCHLCEVTVSKKAKHCSACNKCVSGFDHHCKWLNNCVGSRNYWFFFCSVVSALAGMFSTMIILLYISVKLFTNPSELRTDPLYKEVSTVNTWLLFLPLCAVPVKTPMVLSILTVVLPLVLTSFVLLGHLLIFHFYLLAKHLSTFDYIMQARFQQSTSPTERKDLCAQMEGGLPQEENDSSKSPPSSSLPNGQKKKKLLLTSVCSVLFPKAAIHPKKCSSQAGLSSPQGLTALEGELPETKTEVYTHPQ
SIO_010081: LOC125367721
subclass of: SO_0000673
so part of: LOC125367721
location: complement(join(421821..421904,423051..423153,425585..425622,428388..428500,431617..431772,433338..433462,435745..435846,436640..436818,440125..440346))
location: region:421821-440346:-1
so has part: feature:440125-440346:-1:exon
so has part: feature:436640-436818:-1:exon
so has part: feature:435745-435846:-1:exon
so has part: feature:433338-433462:-1:exon
so has part: feature:431617-431772:-1:exon
so has part: feature:428388-428500:-1:exon
so has part: feature:425585-425622:-1:exon
so has part: feature:423051-423153:-1:exon
so has part: feature:421821-421904:-1:exon

XP_048224375.1
type: Protein
SIO_000068: ncbiprotein

position:421821:-1
position: 421821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440125-440346:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436640-436818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435745-435846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433338-433462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431617-431772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:428388-428500:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:425585-425622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:423051-423153:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:421821-421904:-1:exon

LOC125367722
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367722
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 428240..430190
location: region:428240-430190:1
so has part: feature:428240-430190:1:exon
subclass of: SO_0000011

125367722
type: Gene
SIO_000068: ncbigene

position:428240:1
position: 428240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430190:1
position: 430190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428240-430190:1:exon

LOC125367722
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125367722
product: uncharacterized LOC125367722
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007214135.1
SIO_010081: LOC125367722
subclass of: SO_0000673
so part of: LOC125367722
location: join(428240..428342,428397..428725,429827..430190)
location: region:428240-430190:1
so has part: feature:428240-428342:1:exon
so has part: feature:428397-428725:1:exon
so has part: feature:429827-430190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:428240-428342:1:exon

position:428342:1
position: 428342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:428397-428725:1:exon

position:428397:1
position: 428397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428725:1
position: 428725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:429827-430190:1:exon

position:429827:1
position: 429827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125367461
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367461
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 443778..459849
location: region:443778-459849:1
so has part: feature:443778-459849:1:exon
subclass of: SO_0000011

125367461
type: Gene
SIO_000068: ncbigene

position:443778:1
position: 443778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459849:1
position: 459849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443778-459849:1:exon

LOC125367461
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125367461
product: uncharacterized LOC125367461
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007214091.1
SIO_010081: LOC125367461
subclass of: SO_0000673
so part of: LOC125367461
location: join(443778..443788,446363..446364,459703..459849)
location: region:443778-459849:1
so has part: feature:443778-443788:1:exon
so has part: feature:446363-446364:1:exon
so has part: feature:459703-459849:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443778-443788:1:exon

position:443788:1
position: 443788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:446363-446364:1:exon

position:446363:1
position: 446363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446364:1
position: 446364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:459703-459849:1:exon

position:459703:1
position: 459703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Brd9
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Brd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(447659..478050)
location: region:447659-478050:-1
so has part: feature:447659-478050:-1:exon
subclass of: SO_0000010

125367460
type: Gene
SIO_000068: ncbigene

position:447659:-1
position: 447659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478050:-1
position: 478050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447659-478050:-1:exon

Brd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Brd9
product: bromodomain containing 9, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368133.1
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(447659..448155,448251..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469612,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478050))
location: region:447659-478050:-1
so has part: feature:477958-478050:-1:exon
so has part: feature:476389-476603:-1:exon
so has part: feature:476026-476158:-1:exon
so has part: feature:474420-474480:-1:exon
so has part: feature:472411-472555:-1:exon
so has part: feature:470208-470318:-1:exon
so has part: feature:469500-469612:-1:exon
so has part: feature:466444-466576:-1:exon
so has part: feature:464693-464768:-1:exon
so has part: feature:462201-462296:-1:exon
so has part: feature:460138-460270:-1:exon
so has part: feature:455211-455322:-1:exon
so has part: feature:451892-451930:-1:exon
so has part: feature:450950-451052:-1:exon
so has part: feature:449097-449264:-1:exon
so has part: feature:448251-448358:-1:exon
so has part: feature:447659-448155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477958-478050:-1:exon

position:477958:-1
position: 477958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:476389-476603:-1:exon

position:476389:-1
position: 476389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476603:-1
position: 476603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:476026-476158:-1:exon

position:476026:-1
position: 476026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476158:-1
position: 476158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

position:474420:-1
position: 474420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474480:-1
position: 474480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:472411-472555:-1:exon

position:472411:-1
position: 472411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472555:-1
position: 472555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

position:470208:-1
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urn:…
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urn:…
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position:464768:-1
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urn:…
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urn:…
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urn:…
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position:455322:-1
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urn:…
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SIO_000628: feature:451892-451930:-1:exon

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position:451930:-1
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urn:…
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urn:…
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urn:…
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position:448358:-1
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urn:…
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position:448155:-1
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reference: sequence
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Brd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Brd9
product: bromodomain containing 9, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368131.1
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(447659..448155,448251..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469615,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478050))
location: region:447659-478050:-1
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469500-469615:-1:exon

position:469615:-1
position: 469615
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:466444-466576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464693-464768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462201-462296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460138-460270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455211-455322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451892-451930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450950-451052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449097-449264:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448251-448358:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:447659-448155:-1:exon

Brd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Brd9
product: bromodomain containing 9, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368130.1
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(447659..447905,448255..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469675,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478050))
location: region:447659-478050:-1
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so has part: feature:449097-449264:-1:exon
so has part: feature:448255-448358:-1:exon
so has part: feature:447659-447905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477958-478050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476389-476603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476026-476158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472411-472555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469500-469675:-1:exon

position:469675:-1
position: 469675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:466444-466576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464693-464768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462201-462296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460138-460270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455211-455322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451892-451930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450950-451052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449097-449264:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448255-448358:-1:exon

position:448255:-1
position: 448255
reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:447659-447905:-1:exon

position:447905:-1
position: 447905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Brd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Brd9
product: bromodomain containing 9, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368129.1
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(447659..447908,448255..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469675,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478050))
location: region:447659-478050:-1
so has part: feature:477958-478050:-1:exon
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so has part: feature:449097-449264:-1:exon
so has part: feature:448255-448358:-1:exon
so has part: feature:447659-447908:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477958-478050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476389-476603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476026-476158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472411-472555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469500-469675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466444-466576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464693-464768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462201-462296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460138-460270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455211-455322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451892-451930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450950-451052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449097-449264:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448255-448358:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:447659-447908:-1:exon

position:447908:-1
position: 447908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Brd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Brd9
product: bromodomain containing 9, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368126.1
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(447659..448155,448255..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469675,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478050))
location: region:447659-478050:-1
so has part: feature:477958-478050:-1:exon
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so has part: feature:476026-476158:-1:exon
so has part: feature:474420-474480:-1:exon
so has part: feature:472411-472555:-1:exon
so has part: feature:470208-470318:-1:exon
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so has part: feature:462201-462296:-1:exon
so has part: feature:460138-460270:-1:exon
so has part: feature:455211-455322:-1:exon
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so has part: feature:449097-449264:-1:exon
so has part: feature:448255-448358:-1:exon
so has part: feature:447659-448155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477958-478050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476389-476603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476026-476158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472411-472555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469500-469675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466444-466576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464693-464768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462201-462296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460138-460270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455211-455322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451892-451930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450950-451052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449097-449264:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448255-448358:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:447659-448155:-1:exon

Brd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Brd9
product: bromodomain containing 9, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368127.1
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(447659..447905,448251..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469675,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478050))
location: region:447659-478050:-1
so has part: feature:477958-478050:-1:exon
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so has part: feature:476026-476158:-1:exon
so has part: feature:474420-474480:-1:exon
so has part: feature:472411-472555:-1:exon
so has part: feature:470208-470318:-1:exon
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so has part: feature:466444-466576:-1:exon
so has part: feature:464693-464768:-1:exon
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so has part: feature:460138-460270:-1:exon
so has part: feature:455211-455322:-1:exon
so has part: feature:451892-451930:-1:exon
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so has part: feature:449097-449264:-1:exon
so has part: feature:448251-448358:-1:exon
so has part: feature:447659-447905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477958-478050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476389-476603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476026-476158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472411-472555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469500-469675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466444-466576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464693-464768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462201-462296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460138-460270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455211-455322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451892-451930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450950-451052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449097-449264:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448251-448358:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:447659-447905:-1:exon

Brd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Brd9
product: bromodomain containing 9, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368128.1
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(447659..447908,448251..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469675,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478050))
location: region:447659-478050:-1
so has part: feature:477958-478050:-1:exon
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so has part: feature:476026-476158:-1:exon
so has part: feature:474420-474480:-1:exon
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so has part: feature:470208-470318:-1:exon
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so has part: feature:464693-464768:-1:exon
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so has part: feature:449097-449264:-1:exon
so has part: feature:448251-448358:-1:exon
so has part: feature:447659-447908:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477958-478050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476389-476603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476026-476158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472411-472555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469500-469675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466444-466576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464693-464768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462201-462296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460138-460270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455211-455322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451892-451930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450950-451052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449097-449264:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448251-448358:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:447659-447908:-1:exon

Brd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Brd9
product: bromodomain containing 9, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368125.1
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(447659..448155,448251..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469675,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478050))
location: region:447659-478050:-1
so has part: feature:477958-478050:-1:exon
so has part: feature:476389-476603:-1:exon
so has part: feature:476026-476158:-1:exon
so has part: feature:474420-474480:-1:exon
so has part: feature:472411-472555:-1:exon
so has part: feature:470208-470318:-1:exon
so has part: feature:469500-469675:-1:exon
so has part: feature:466444-466576:-1:exon
so has part: feature:464693-464768:-1:exon
so has part: feature:462201-462296:-1:exon
so has part: feature:460138-460270:-1:exon
so has part: feature:455211-455322:-1:exon
so has part: feature:451892-451930:-1:exon
so has part: feature:450950-451052:-1:exon
so has part: feature:449097-449264:-1:exon
so has part: feature:448251-448358:-1:exon
so has part: feature:447659-448155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477958-478050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476389-476603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476026-476158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472411-472555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469500-469675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466444-466576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464693-464768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462201-462296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460138-460270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455211-455322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451892-451930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450950-451052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449097-449264:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448251-448358:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:447659-448155:-1:exon

Brd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Brd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 9 isoform X3
translation: MGKKHKKHKAEWRSSYEDYADTPLEKPLKLVLKVGGSEVTELSGSGHDSSYYDDRSDHERERHREKKKKKKKKSEKEKHLDDEERRKRKEEKRRKREKEHCDSEGEADAFDPGKKVEVEPPPDRPVRACRTQPAENESTPMQQLLQHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKAALLGSEDTAVEETVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRISRSLPGSKMGYLKKLADGSLLYSVVNAAEPDADEEETHPVDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSASTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKMVDDLLDQITGGDHSRMLFQLKQRRSVPMRPADEVKVGDALGDGSGSVLDFMSMKSYSDVSLDISMLSSLGKVKKELDHDDGHLNLDETARLLQDLHEAQAERGGSRPSSNLSSLSNTSERDQHPPGSPSRLSVGEQPDVTHDPYEFLQSPEPAGSSRN
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(448258..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469612,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478009))
location: region:448258-478009:-1
so has part: feature:477958-478009:-1:exon
so has part: feature:476389-476603:-1:exon
so has part: feature:476026-476158:-1:exon
so has part: feature:474420-474480:-1:exon
so has part: feature:472411-472555:-1:exon
so has part: feature:470208-470318:-1:exon
so has part: feature:469500-469612:-1:exon
so has part: feature:466444-466576:-1:exon
so has part: feature:464693-464768:-1:exon
so has part: feature:462201-462296:-1:exon
so has part: feature:460138-460270:-1:exon
so has part: feature:455211-455322:-1:exon
so has part: feature:451892-451930:-1:exon
so has part: feature:450950-451052:-1:exon
so has part: feature:449097-449264:-1:exon
so has part: feature:448258-448358:-1:exon

XP_048224090.1
type: Protein
SIO_000068: ncbiprotein

position:448258:-1
position: 448258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478009:-1
position: 478009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477958-478009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476389-476603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476026-476158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472411-472555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469500-469612:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466444-466576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464693-464768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462201-462296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460138-460270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455211-455322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451892-451930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450950-451052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449097-449264:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448258-448358:-1:exon

Brd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Brd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 9 isoform X2
translation: MGKKHKKHKAEWRSSYEDYADTPLEKPLKLVLKVGGSEVTELSGSGHDSSYYDDRSDHERERHREKKKKKKKKSEKEKHLDDEERRKRKEEKRRKREKEHCDSEGEADAFDPGKKVEVEPPPDRPVRACRTQPAENESTPMQQLLQHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKQAALLGSEDTAVEETVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRISRSLPGSKMGYLKKLADGSLLYSVVNAAEPDADEEETHPVDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSASTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKMVDDLLDQITGGDHSRMLFQLKQRRSVPMRPADEVKVGDALGDGSGSVLDFMSMKSYSDVSLDISMLSSLGKVKKELDHDDGHLNLDETARLLQDLHEAQAERGGSRPSSNLSSLSNTSERDQHPPGSPSRLSVGEQPDVTHDPYEFLQSPEPAGSSRN
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(448258..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469615,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478009))
location: region:448258-478009:-1
so has part: feature:477958-478009:-1:exon
so has part: feature:476389-476603:-1:exon
so has part: feature:476026-476158:-1:exon
so has part: feature:474420-474480:-1:exon
so has part: feature:472411-472555:-1:exon
so has part: feature:470208-470318:-1:exon
so has part: feature:469500-469615:-1:exon
so has part: feature:466444-466576:-1:exon
so has part: feature:464693-464768:-1:exon
so has part: feature:462201-462296:-1:exon
so has part: feature:460138-460270:-1:exon
so has part: feature:455211-455322:-1:exon
so has part: feature:451892-451930:-1:exon
so has part: feature:450950-451052:-1:exon
so has part: feature:449097-449264:-1:exon
so has part: feature:448258-448358:-1:exon

XP_048224088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477958-478009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476389-476603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476026-476158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472411-472555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469500-469615:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466444-466576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464693-464768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462201-462296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460138-460270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455211-455322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451892-451930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450950-451052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449097-449264:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448258-448358:-1:exon

Brd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Brd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 9 isoform X1
translation: MGKKHKKHKAEWRSSYEDYADTPLEKPLKLVLKVGGSEVTELSGSGHDSSYYDDRSDHERERHREKKKKKKKKSEKEKHLDDEERRKRKEEKRRKREKEHCDSEGEADAFDPGKKVEVEPPPDRPVRACRTQPAENESTPMQQLLQHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKERLLALKRSMSFMQDMDFSQQAALLGSEDTAVEETVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRISRSLPGSKMGYLKKLADGSLLYSVVNAAEPDADEEETHPVDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSASTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKMVDDLLDQITGGDHSRMLFQLKQRRSVPMRPADEVKVGDALGDGSGSVLDFMSMKSYSDVSLDISMLSSLGKVKKELDHDDGHLNLDETARLLQDLHEAQAERGGSRPSSNLSSLSNTSERDQHPPGSPSRLSVGEQPDVTHDPYEFLQSPEPAGSSRN
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(448258..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469675,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478009))
location: region:448258-478009:-1
so has part: feature:477958-478009:-1:exon
so has part: feature:476389-476603:-1:exon
so has part: feature:476026-476158:-1:exon
so has part: feature:474420-474480:-1:exon
so has part: feature:472411-472555:-1:exon
so has part: feature:470208-470318:-1:exon
so has part: feature:469500-469675:-1:exon
so has part: feature:466444-466576:-1:exon
so has part: feature:464693-464768:-1:exon
so has part: feature:462201-462296:-1:exon
so has part: feature:460138-460270:-1:exon
so has part: feature:455211-455322:-1:exon
so has part: feature:451892-451930:-1:exon
so has part: feature:450950-451052:-1:exon
so has part: feature:449097-449264:-1:exon
so has part: feature:448258-448358:-1:exon

XP_048224082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477958-478009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476389-476603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476026-476158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472411-472555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469500-469675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466444-466576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464693-464768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462201-462296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460138-460270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455211-455322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451892-451930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450950-451052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449097-449264:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448258-448358:-1:exon

Brd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Brd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 9 isoform X1
translation: MGKKHKKHKAEWRSSYEDYADTPLEKPLKLVLKVGGSEVTELSGSGHDSSYYDDRSDHERERHREKKKKKKKKSEKEKHLDDEERRKRKEEKRRKREKEHCDSEGEADAFDPGKKVEVEPPPDRPVRACRTQPAENESTPMQQLLQHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKERLLALKRSMSFMQDMDFSQQAALLGSEDTAVEETVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRISRSLPGSKMGYLKKLADGSLLYSVVNAAEPDADEEETHPVDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSASTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKMVDDLLDQITGGDHSRMLFQLKQRRSVPMRPADEVKVGDALGDGSGSVLDFMSMKSYSDVSLDISMLSSLGKVKKELDHDDGHLNLDETARLLQDLHEAQAERGGSRPSSNLSSLSNTSERDQHPPGSPSRLSVGEQPDVTHDPYEFLQSPEPAGSSRN
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(448258..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469675,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478009))
location: region:448258-478009:-1
so has part: feature:477958-478009:-1:exon
so has part: feature:476389-476603:-1:exon
so has part: feature:476026-476158:-1:exon
so has part: feature:474420-474480:-1:exon
so has part: feature:472411-472555:-1:exon
so has part: feature:470208-470318:-1:exon
so has part: feature:469500-469675:-1:exon
so has part: feature:466444-466576:-1:exon
so has part: feature:464693-464768:-1:exon
so has part: feature:462201-462296:-1:exon
so has part: feature:460138-460270:-1:exon
so has part: feature:455211-455322:-1:exon
so has part: feature:451892-451930:-1:exon
so has part: feature:450950-451052:-1:exon
so has part: feature:449097-449264:-1:exon
so has part: feature:448258-448358:-1:exon

XP_048224083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477958-478009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476389-476603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476026-476158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472411-472555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469500-469675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466444-466576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464693-464768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462201-462296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460138-460270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455211-455322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451892-451930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450950-451052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449097-449264:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448258-448358:-1:exon

Brd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Brd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 9 isoform X1
translation: MGKKHKKHKAEWRSSYEDYADTPLEKPLKLVLKVGGSEVTELSGSGHDSSYYDDRSDHERERHREKKKKKKKKSEKEKHLDDEERRKRKEEKRRKREKEHCDSEGEADAFDPGKKVEVEPPPDRPVRACRTQPAENESTPMQQLLQHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKERLLALKRSMSFMQDMDFSQQAALLGSEDTAVEETVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRISRSLPGSKMGYLKKLADGSLLYSVVNAAEPDADEEETHPVDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSASTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKMVDDLLDQITGGDHSRMLFQLKQRRSVPMRPADEVKVGDALGDGSGSVLDFMSMKSYSDVSLDISMLSSLGKVKKELDHDDGHLNLDETARLLQDLHEAQAERGGSRPSSNLSSLSNTSERDQHPPGSPSRLSVGEQPDVTHDPYEFLQSPEPAGSSRN
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(448258..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469675,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478009))
location: region:448258-478009:-1
so has part: feature:477958-478009:-1:exon
so has part: feature:476389-476603:-1:exon
so has part: feature:476026-476158:-1:exon
so has part: feature:474420-474480:-1:exon
so has part: feature:472411-472555:-1:exon
so has part: feature:470208-470318:-1:exon
so has part: feature:469500-469675:-1:exon
so has part: feature:466444-466576:-1:exon
so has part: feature:464693-464768:-1:exon
so has part: feature:462201-462296:-1:exon
so has part: feature:460138-460270:-1:exon
so has part: feature:455211-455322:-1:exon
so has part: feature:451892-451930:-1:exon
so has part: feature:450950-451052:-1:exon
so has part: feature:449097-449264:-1:exon
so has part: feature:448258-448358:-1:exon

XP_048224084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477958-478009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476389-476603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476026-476158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472411-472555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469500-469675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466444-466576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464693-464768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462201-462296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460138-460270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455211-455322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451892-451930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450950-451052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449097-449264:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448258-448358:-1:exon

Brd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Brd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 9 isoform X1
translation: MGKKHKKHKAEWRSSYEDYADTPLEKPLKLVLKVGGSEVTELSGSGHDSSYYDDRSDHERERHREKKKKKKKKSEKEKHLDDEERRKRKEEKRRKREKEHCDSEGEADAFDPGKKVEVEPPPDRPVRACRTQPAENESTPMQQLLQHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKERLLALKRSMSFMQDMDFSQQAALLGSEDTAVEETVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRISRSLPGSKMGYLKKLADGSLLYSVVNAAEPDADEEETHPVDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSASTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKMVDDLLDQITGGDHSRMLFQLKQRRSVPMRPADEVKVGDALGDGSGSVLDFMSMKSYSDVSLDISMLSSLGKVKKELDHDDGHLNLDETARLLQDLHEAQAERGGSRPSSNLSSLSNTSERDQHPPGSPSRLSVGEQPDVTHDPYEFLQSPEPAGSSRN
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(448258..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469675,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478009))
location: region:448258-478009:-1
so has part: feature:477958-478009:-1:exon
so has part: feature:476389-476603:-1:exon
so has part: feature:476026-476158:-1:exon
so has part: feature:474420-474480:-1:exon
so has part: feature:472411-472555:-1:exon
so has part: feature:470208-470318:-1:exon
so has part: feature:469500-469675:-1:exon
so has part: feature:466444-466576:-1:exon
so has part: feature:464693-464768:-1:exon
so has part: feature:462201-462296:-1:exon
so has part: feature:460138-460270:-1:exon
so has part: feature:455211-455322:-1:exon
so has part: feature:451892-451930:-1:exon
so has part: feature:450950-451052:-1:exon
so has part: feature:449097-449264:-1:exon
so has part: feature:448258-448358:-1:exon

XP_048224085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477958-478009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476389-476603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476026-476158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472411-472555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469500-469675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466444-466576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464693-464768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462201-462296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460138-460270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455211-455322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451892-451930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450950-451052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449097-449264:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448258-448358:-1:exon

Brd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Brd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 9 isoform X1
translation: MGKKHKKHKAEWRSSYEDYADTPLEKPLKLVLKVGGSEVTELSGSGHDSSYYDDRSDHERERHREKKKKKKKKSEKEKHLDDEERRKRKEEKRRKREKEHCDSEGEADAFDPGKKVEVEPPPDRPVRACRTQPAENESTPMQQLLQHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKERLLALKRSMSFMQDMDFSQQAALLGSEDTAVEETVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRISRSLPGSKMGYLKKLADGSLLYSVVNAAEPDADEEETHPVDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSASTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKMVDDLLDQITGGDHSRMLFQLKQRRSVPMRPADEVKVGDALGDGSGSVLDFMSMKSYSDVSLDISMLSSLGKVKKELDHDDGHLNLDETARLLQDLHEAQAERGGSRPSSNLSSLSNTSERDQHPPGSPSRLSVGEQPDVTHDPYEFLQSPEPAGSSRN
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(448258..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469675,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478009))
location: region:448258-478009:-1
so has part: feature:477958-478009:-1:exon
so has part: feature:476389-476603:-1:exon
so has part: feature:476026-476158:-1:exon
so has part: feature:474420-474480:-1:exon
so has part: feature:472411-472555:-1:exon
so has part: feature:470208-470318:-1:exon
so has part: feature:469500-469675:-1:exon
so has part: feature:466444-466576:-1:exon
so has part: feature:464693-464768:-1:exon
so has part: feature:462201-462296:-1:exon
so has part: feature:460138-460270:-1:exon
so has part: feature:455211-455322:-1:exon
so has part: feature:451892-451930:-1:exon
so has part: feature:450950-451052:-1:exon
so has part: feature:449097-449264:-1:exon
so has part: feature:448258-448358:-1:exon

XP_048224086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477958-478009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476389-476603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476026-476158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472411-472555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469500-469675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466444-466576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464693-464768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462201-462296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460138-460270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455211-455322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451892-451930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450950-451052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449097-449264:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448258-448358:-1:exon

Brd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Brd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 9 isoform X1
translation: MGKKHKKHKAEWRSSYEDYADTPLEKPLKLVLKVGGSEVTELSGSGHDSSYYDDRSDHERERHREKKKKKKKKSEKEKHLDDEERRKRKEEKRRKREKEHCDSEGEADAFDPGKKVEVEPPPDRPVRACRTQPAENESTPMQQLLQHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKERLLALKRSMSFMQDMDFSQQAALLGSEDTAVEETVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRISRSLPGSKMGYLKKLADGSLLYSVVNAAEPDADEEETHPVDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSASTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKMVDDLLDQITGGDHSRMLFQLKQRRSVPMRPADEVKVGDALGDGSGSVLDFMSMKSYSDVSLDISMLSSLGKVKKELDHDDGHLNLDETARLLQDLHEAQAERGGSRPSSNLSSLSNTSERDQHPPGSPSRLSVGEQPDVTHDPYEFLQSPEPAGSSRN
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(448258..448358,449097..449264,450950..451052,451892..451930,455211..455322,460138..460270,462201..462296,464693..464768,466444..466576,469500..469675,470208..470318,472411..472555,474420..474480,476026..476158,476389..476603,477958..478009))
location: region:448258-478009:-1
so has part: feature:477958-478009:-1:exon
so has part: feature:476389-476603:-1:exon
so has part: feature:476026-476158:-1:exon
so has part: feature:474420-474480:-1:exon
so has part: feature:472411-472555:-1:exon
so has part: feature:470208-470318:-1:exon
so has part: feature:469500-469675:-1:exon
so has part: feature:466444-466576:-1:exon
so has part: feature:464693-464768:-1:exon
so has part: feature:462201-462296:-1:exon
so has part: feature:460138-460270:-1:exon
so has part: feature:455211-455322:-1:exon
so has part: feature:451892-451930:-1:exon
so has part: feature:450950-451052:-1:exon
so has part: feature:449097-449264:-1:exon
so has part: feature:448258-448358:-1:exon

XP_048224087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477958-478009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476389-476603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476026-476158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474420-474480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472411-472555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470208-470318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469500-469675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466444-466576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464693-464768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462201-462296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460138-460270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455211-455322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451892-451930:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450950-451052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449097-449264:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448258-448358:-1:exon

Trip13
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Trip13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 478099..496316
location: region:478099-496316:1
so has part: feature:478099-496316:1:exon
subclass of: SO_0000010

125367470
type: Gene
SIO_000068: ncbigene

position:478099:1
position: 478099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496316:1
position: 496316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478099-496316:1:exon

Trip13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Trip13
product: thyroid hormone receptor interactor 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048368145.1
SIO_010081: Trip13
subclass of: SO_0000673
so part of: Trip13
location: join(478099..478146,478265..478373,479107..479272,482894..483023,483978..484033,484677..484767,486721..486793,489733..489796,490571..490657,490871..490977,491517..491670,493287..493399,494421..494490,495301..496316)
location: region:478099-496316:1
so has part: feature:478099-478146:1:exon
so has part: feature:478265-478373:1:exon
so has part: feature:479107-479272:1:exon
so has part: feature:482894-483023:1:exon
so has part: feature:483978-484033:1:exon
so has part: feature:484677-484767:1:exon
so has part: feature:486721-486793:1:exon
so has part: feature:489733-489796:1:exon
so has part: feature:490571-490657:1:exon
so has part: feature:490871-490977:1:exon
so has part: feature:491517-491670:1:exon
so has part: feature:493287-493399:1:exon
so has part: feature:494421-494490:1:exon
so has part: feature:495301-496316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:478099-478146:1:exon

position:478146:1
position: 478146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:478265-478373:1:exon

position:478265:1
position: 478265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478373:1
position: 478373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479107-479272:1:exon

position:479107:1
position: 479107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479272:1
position: 479272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:482894-483023:1:exon

position:482894:1
position: 482894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483023:1
position: 483023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:483978-484033:1:exon

position:483978:1
position: 483978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484033:1
position: 484033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:484677-484767:1:exon

position:484677:1
position: 484677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484767:1
position: 484767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:486721-486793:1:exon

position:486721:1
position: 486721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486793:1
position: 486793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:489733-489796:1:exon

position:489733:1
position: 489733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489796:1
position: 489796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:490571-490657:1:exon

position:490571:1
position: 490571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490657:1
position: 490657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:490871-490977:1:exon

position:490871:1
position: 490871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490977:1
position: 490977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:491517-491670:1:exon

position:491517:1
position: 491517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491670:1
position: 491670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:493287-493399:1:exon

position:493287:1
position: 493287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493399:1
position: 493399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:494421-494490:1:exon

position:494421:1
position: 494421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494490:1
position: 494490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:495301-496316:1:exon

position:495301:1
position: 495301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Trip13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Trip13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pachytene checkpoint protein 2 homolog
translation: MDEAVGDLKQALPCVAESPAVHVEVLQRGGSTAKKEDIKLNVRKLLNRHNIVFGDYTWSEFDDPFLTRNVQSVSIVDTELKAKDLQPIDLNACTVALHIFQLNEDGPISENLEEETENIIAANHWVLPAAEFHGLWDSLVYDVEVKSHLLDYVMTTLLFSEKNVDSNLITWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLVEINSHSLFSKWFSESGKLVTRMFQKIHDLIDDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSNITEKIDVAFMDRADIKQYIGPPSAAAIFKIYLSCLEELMKCQIIYPRQQLLTLRELEMIGFIENNVSKLSLLLSEISRKSQGLSGRVLRKLPFLAHALYIQAPTVTIEGFLQALSLAVDKQFEEKKKLSTHI
SIO_010081: Trip13
subclass of: SO_0000673
so part of: Trip13
location: join(478282..478373,479107..479272,482894..483023,483978..484033,484677..484767,486721..486793,489733..489796,490571..490657,490871..490977,491517..491670,493287..493399,494421..494490,495301..495396)
location: region:478282-495396:1
so has part: feature:478282-478373:1:exon
so has part: feature:479107-479272:1:exon
so has part: feature:482894-483023:1:exon
so has part: feature:483978-484033:1:exon
so has part: feature:484677-484767:1:exon
so has part: feature:486721-486793:1:exon
so has part: feature:489733-489796:1:exon
so has part: feature:490571-490657:1:exon
so has part: feature:490871-490977:1:exon
so has part: feature:491517-491670:1:exon
so has part: feature:493287-493399:1:exon
so has part: feature:494421-494490:1:exon
so has part: feature:495301-495396:1:exon

XP_048224102.1
type: Protein
SIO_000068: ncbiprotein

position:478282:1
position: 478282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495396:1
position: 495396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478282-478373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479107-479272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482894-483023:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:483978-484033:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484677-484767:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486721-486793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:489733-489796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:490571-490657:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:490871-490977:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:491517-491670:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:493287-493399:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:494421-494490:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:495301-495396:1:exon

Nkd2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Nkd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 549230..575736
location: region:549230-575736:1
so has part: feature:549230-575736:1:exon
subclass of: SO_0000010

125367863
type: Gene
SIO_000068: ncbigene

position:549230:1
position: 549230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575736:1
position: 575736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549230-575736:1:exon

Nkd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Nkd2
product: NKD inhibitor of WNT signaling pathway 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048368582.1
SIO_010081: Nkd2
subclass of: SO_0000673
so part of: Nkd2
location: join(549230..549408,550174..550253,552290..552349,552491..552591,569840..569897,571309..571436,572052..572147,572773..572920,574041..574110,574490..574617,575180..575736)
location: region:549230-575736:1
so has part: feature:549230-549408:1:exon
so has part: feature:550174-550253:1:exon
so has part: feature:552290-552349:1:exon
so has part: feature:552491-552591:1:exon
so has part: feature:569840-569897:1:exon
so has part: feature:571309-571436:1:exon
so has part: feature:572052-572147:1:exon
so has part: feature:572773-572920:1:exon
so has part: feature:574041-574110:1:exon
so has part: feature:574490-574617:1:exon
so has part: feature:575180-575736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549230-549408:1:exon

position:549408:1
position: 549408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550174-550253:1:exon

position:550174:1
position: 550174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550253:1
position: 550253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:552290-552349:1:exon

position:552290:1
position: 552290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552349:1
position: 552349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552491-552591:1:exon

position:552491:1
position: 552491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552591:1
position: 552591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:569840-569897:1:exon

position:569840:1
position: 569840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569897:1
position: 569897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:571309-571436:1:exon

position:571309:1
position: 571309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571436:1
position: 571436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:572052-572147:1:exon

position:572052:1
position: 572052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572147:1
position: 572147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:572773-572920:1:exon

position:572773:1
position: 572773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572920:1
position: 572920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:574041-574110:1:exon

position:574041:1
position: 574041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574110:1
position: 574110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:574490-574617:1:exon

position:574490:1
position: 574490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574617:1
position: 574617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:575180-575736:1:exon

position:575180:1
position: 575180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nkd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Nkd2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein naked cuticle homolog 2
translation: MERTLHGRLRLATEGRVASATGTSQGTELKSAHPLPHGPQTSGDSTRPPGAEREGRSSSAPARGARDPGGRWPRKRRSMGKFQSKHGRMPCVTAAAHTCKRRESPEGDSFAASQAGRGGHRGAEEARCAGRVEHHVRDRPELLSGDPKEGPFREEQGPLVAVPPEKAEGREGPGQLLGLEDRERTGSHEGPRGPGKKNLNIDALQCDVSVEGDNRQEWTFTLYDFDNCGKVTREDMSSLMHTIYEVVDASINHSSGSSKTLRVKLTVSPEPSSKRKECLPSGQDQEPSRSRTESDLADDRRPSYHCRRPNTDSRPCSVRGSYCVDENTERRNHYLDLAGIENYTSKFGPGSPPDAGRQEHHSRAVHPQSRCRSQDSDAHGGHPRRSQAPADHPPPAAQPRPKGPEKQFLRSPKGSGKPPGGPGCGKAGKAPSHCPAAAPPPPAAQDGHHLPRPPPQPPPQPHGQKRHRQKGREGHSPLKAAHGQPAPAELEAARDLPPVLAPEGHGGPVIQRHEHHHHHEHHHHHHHHHFHPS
SIO_010081: Nkd2
subclass of: SO_0000673
so part of: Nkd2
location: join(549230..549408,550174..550253,552290..552349,552491..552591,569840..569897,571309..571436,572052..572147,572773..572920,574041..574110,574490..574617,575180..575736)
location: region:549230-575736:1
so has part: feature:549230-549408:1:exon
so has part: feature:550174-550253:1:exon
so has part: feature:552290-552349:1:exon
so has part: feature:552491-552591:1:exon
so has part: feature:569840-569897:1:exon
so has part: feature:571309-571436:1:exon
so has part: feature:572052-572147:1:exon
so has part: feature:572773-572920:1:exon
so has part: feature:574041-574110:1:exon
so has part: feature:574490-574617:1:exon
so has part: feature:575180-575736:1:exon

XP_048224539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549230-549408:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550174-550253:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552290-552349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552491-552591:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:569840-569897:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:571309-571436:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:572052-572147:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:572773-572920:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:574041-574110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:574490-574617:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:575180-575736:1:exon

Slc12a7
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Slc12a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(577464..624080)
location: region:577464-624080:-1
so has part: feature:577464-624080:-1:exon
subclass of: SO_0000010

125367453
type: Gene
SIO_000068: ncbigene

position:577464:-1
position: 577464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624080:-1
position: 624080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577464-624080:-1:exon

Slc12a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slc12a7
product: solute carrier family 12 member 7
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon
transcript id: XM_048368118.1
SIO_010081: Slc12a7
subclass of: SO_0000673
so part of: Slc12a7
location: complement(join(577464..578935,578975..579162,580366..580499,584258..584437,585460..585567,588072..588203,588644..588813,589177..589372,592543..592711,593056..593160,594059..594178,594632..594730,595117..595235,595845..596019,596915..596972,598194..598292,599033..599200,600760..600971,601528..601769,601981..602111,603783..603837,604914..605060,607519..607641,608064..608158,623902..624080))
location: region:577464-624080:-1
so has part: feature:623902-624080:-1:exon
so has part: feature:608064-608158:-1:exon
so has part: feature:607519-607641:-1:exon
so has part: feature:604914-605060:-1:exon
so has part: feature:603783-603837:-1:exon
so has part: feature:601981-602111:-1:exon
so has part: feature:601528-601769:-1:exon
so has part: feature:600760-600971:-1:exon
so has part: feature:599033-599200:-1:exon
so has part: feature:598194-598292:-1:exon
so has part: feature:596915-596972:-1:exon
so has part: feature:595845-596019:-1:exon
so has part: feature:595117-595235:-1:exon
so has part: feature:594632-594730:-1:exon
so has part: feature:594059-594178:-1:exon
so has part: feature:593056-593160:-1:exon
so has part: feature:592543-592711:-1:exon
so has part: feature:589177-589372:-1:exon
so has part: feature:588644-588813:-1:exon
so has part: feature:588072-588203:-1:exon
so has part: feature:585460-585567:-1:exon
so has part: feature:584258-584437:-1:exon
so has part: feature:580366-580499:-1:exon
so has part: feature:578975-579162:-1:exon
so has part: feature:577464-578935:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623902-624080:-1:exon

position:623902:-1
position: 623902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:608064-608158:-1:exon

position:608064:-1
position: 608064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608158:-1
position: 608158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:607519-607641:-1:exon

position:607519:-1
position: 607519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607641:-1
position: 607641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:604914-605060:-1:exon

position:604914:-1
position: 604914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605060:-1
position: 605060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:603783-603837:-1:exon

position:603783:-1
position: 603783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603837:-1
position: 603837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:601981-602111:-1:exon

position:601981:-1
position: 601981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602111:-1
position: 602111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:601528-601769:-1:exon

position:601528:-1
position: 601528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601769:-1
position: 601769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:600760-600971:-1:exon

position:600760:-1
position: 600760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600971:-1
position: 600971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:599033-599200:-1:exon

position:599033:-1
position: 599033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599200:-1
position: 599200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:598194-598292:-1:exon

position:598194:-1
position: 598194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598292:-1
position: 598292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:596915-596972:-1:exon

position:596915:-1
position: 596915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596972:-1
position: 596972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:595845-596019:-1:exon

position:595845:-1
position: 595845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596019:-1
position: 596019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:595117-595235:-1:exon

position:595117:-1
position: 595117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595235:-1
position: 595235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:594632-594730:-1:exon

position:594632:-1
position: 594632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594730:-1
position: 594730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:594059-594178:-1:exon

position:594059:-1
position: 594059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594178:-1
position: 594178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:593056-593160:-1:exon

position:593056:-1
position: 593056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593160:-1
position: 593160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:592543-592711:-1:exon

position:592543:-1
position: 592543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592711:-1
position: 592711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:589177-589372:-1:exon

position:589177:-1
position: 589177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589372:-1
position: 589372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:588644-588813:-1:exon

position:588644:-1
position: 588644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588813:-1
position: 588813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:588072-588203:-1:exon

position:588072:-1
position: 588072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588203:-1
position: 588203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:585460-585567:-1:exon

position:585460:-1
position: 585460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585567:-1
position: 585567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:584258-584437:-1:exon

position:584258:-1
position: 584258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584437:-1
position: 584437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:580366-580499:-1:exon

position:580366:-1
position: 580366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580499:-1
position: 580499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:578975-579162:-1:exon

position:578975:-1
position: 578975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579162:-1
position: 579162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:577464-578935:-1:exon

position:578935:-1
position: 578935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc12a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slc12a7
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: solute carrier family 12 member 7
translation: MPTNFTVVPVEGRADGDGAEVAGREETPGPAEEDGEPASPGPGDGTPREISPFINNVEMERESYYEGKNMALFEEEMDSNPMVSSLLNKLATYTNLSQGVVEHEEDEDSRRREAKAPRMGTFIGVYLPCLQNILGVILFLRLTWIVGAAGVLESFLIVAMCCTCTMLTAISMSAIATNGVVPAGGSYYMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGTIEIFLTYISPSAAIFQAEGAGGEAAAMLHNMRVYGSCTLVLMAVVVFVGVKYVNKLALVFLACVVLSILAIYAGVIKTAFDPPDIPVCLLGNRTLSRRSFNVCAKVEVISNGTVTTALWGLFCNGSSLSAACDEYFVQNNVTEVQGIPGVASGVFLDNLWGTYSDKGAFVEKKGVPSVPVPEEGRPSGMPYVLTDIMTYFTLLVGIYFPSVTGIMAGSNRSGDLKDAQKSIPTGTILAIVTTSFIYLSCIVLFGACIEGVVLRDKFGEALQGNLVIGMLAWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIARDGIVPFLQVFGHGKANGEPTWALLLTALICETGILIASLDAVAPILSMFFLMCYMFVNLACAVQTLLRTPNWRPRFKYYHWTLSFLGMSLCLALMFICSWYYALFAMLIAGCIYKYIEYRGAEKEWGDGIRGLSLNAARYALLRVEHGPPHTKNWRPQVLVMLNLDAEQCVKHPRLLSFTSQLKAGKGLTIVGSVLEGTYLDKHAEAQRAEENIRALMGAEKTKGFCQLVVSSNLRDGTSHLIQSAGLGGMKHNTVLMAWPKSWKQADNPFSWKNFVDTVRDTTAAQQALLVAKNIDMFPQNQERFSEGNIDVWWIVHDGGMLMLLPFLLCQHKVWRKCRMRIFTVAQVDDNSIQMKKDLQTFLYHLRISAEVEVVEMVENDISAFTYEKTLMMEQRSQMLKQMQLSKTEREREAQLIHDRNTASHTMATARTQXPPSTPDRVQMTWTKEKLIAEKHRNKDPGASGFKDLFSLKPDQSNVRRMHTAVKLNGVVLSKSQDAQLVLLNMPGPPRNRQGDENYMEFLEVLTEGLNRVLLVRGGGREVITIYS
SIO_010081: Slc12a7
subclass of: SO_0000673
so part of: Slc12a7
location: complement(join(579071..579162,580366..580499,584258..584437,585460..585567,588072..588203,588644..588813,589177..589372,592543..592711,593056..593160,594059..594178,594632..594730,595117..595235,595845..596019,596915..596972,598194..598292,599033..599200,600760..600971,601528..601769,601981..602111,603783..603837,604914..605060,607519..607641,608064..608158,623902..624028))
location: region:579071-624028:-1
so has part: feature:623902-624028:-1:exon
so has part: feature:608064-608158:-1:exon
so has part: feature:607519-607641:-1:exon
so has part: feature:604914-605060:-1:exon
so has part: feature:603783-603837:-1:exon
so has part: feature:601981-602111:-1:exon
so has part: feature:601528-601769:-1:exon
so has part: feature:600760-600971:-1:exon
so has part: feature:599033-599200:-1:exon
so has part: feature:598194-598292:-1:exon
so has part: feature:596915-596972:-1:exon
so has part: feature:595845-596019:-1:exon
so has part: feature:595117-595235:-1:exon
so has part: feature:594632-594730:-1:exon
so has part: feature:594059-594178:-1:exon
so has part: feature:593056-593160:-1:exon
so has part: feature:592543-592711:-1:exon
so has part: feature:589177-589372:-1:exon
so has part: feature:588644-588813:-1:exon
so has part: feature:588072-588203:-1:exon
so has part: feature:585460-585567:-1:exon
so has part: feature:584258-584437:-1:exon
so has part: feature:580366-580499:-1:exon
so has part: feature:579071-579162:-1:exon

XP_048224075.1
type: Protein
SIO_000068: ncbiprotein

position:579071:-1
position: 579071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624028:-1
position: 624028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623902-624028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:608064-608158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:607519-607641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604914-605060:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:603783-603837:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:601981-602111:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:601528-601769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600760-600971:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:599033-599200:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:598194-598292:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:596915-596972:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:595845-596019:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:595117-595235:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:594632-594730:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:594059-594178:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:593056-593160:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:592543-592711:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:589177-589372:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:588644-588813:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:588072-588203:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585460-585567:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:584258-584437:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:580366-580499:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:579071-579162:-1:exon

Clptm1l
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Clptm1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(654775..684838)
location: region:654775-684838:-1
so has part: feature:654775-684838:-1:exon
subclass of: SO_0000010

125367864
type: Gene
SIO_000068: ncbigene

position:654775:-1
position: 654775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684838:-1
position: 684838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654775-684838:-1:exon

Clptm1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Clptm1l
product: CLPTM1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048368583.1
SIO_010081: Clptm1l
subclass of: SO_0000673
so part of: Clptm1l
location: complement(join(654775..654925,670187..670320,670421..670476,671069..671103,671517..671599,672146..672196,674002..674067,674962..675065,676468..676552,677274..677368,677657..677774,680041..680119,680895..681043,681992..682181,684079..684179,684616..684838))
location: region:654775-684838:-1
so has part: feature:684616-684838:-1:exon
so has part: feature:684079-684179:-1:exon
so has part: feature:681992-682181:-1:exon
so has part: feature:680895-681043:-1:exon
so has part: feature:680041-680119:-1:exon
so has part: feature:677657-677774:-1:exon
so has part: feature:677274-677368:-1:exon
so has part: feature:676468-676552:-1:exon
so has part: feature:674962-675065:-1:exon
so has part: feature:674002-674067:-1:exon
so has part: feature:672146-672196:-1:exon
so has part: feature:671517-671599:-1:exon
so has part: feature:671069-671103:-1:exon
so has part: feature:670421-670476:-1:exon
so has part: feature:670187-670320:-1:exon
so has part: feature:654775-654925:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684616-684838:-1:exon

position:684616:-1
position: 684616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:684079-684179:-1:exon

position:684079:-1
position: 684079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684179:-1
position: 684179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:681992-682181:-1:exon

position:681992:-1
position: 681992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682181:-1
position: 682181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:680895-681043:-1:exon

position:680895:-1
position: 680895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681043:-1
position: 681043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:680041-680119:-1:exon

position:680041:-1
position: 680041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680119:-1
position: 680119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:677657-677774:-1:exon

position:677657:-1
position: 677657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677774:-1
position: 677774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:677274-677368:-1:exon

position:677274:-1
position: 677274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677368:-1
position: 677368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:676468-676552:-1:exon

position:676468:-1
position: 676468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676552:-1
position: 676552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:674962-675065:-1:exon

position:674962:-1
position: 674962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675065:-1
position: 675065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:674002-674067:-1:exon

position:674002:-1
position: 674002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674067:-1
position: 674067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:672146-672196:-1:exon

position:672146:-1
position: 672146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672196:-1
position: 672196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:671517-671599:-1:exon

position:671517:-1
position: 671517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671599:-1
position: 671599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:671069-671103:-1:exon

position:671069:-1
position: 671069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671103:-1
position: 671103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:670421-670476:-1:exon

position:670421:-1
position: 670421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670476:-1
position: 670476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:670187-670320:-1:exon

position:670187:-1
position: 670187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670320:-1
position: 670320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:654775-654925:-1:exon

position:654925:-1
position: 654925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Clptm1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Clptm1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleft lip and palate transmembrane protein 1-like protein
translation: MWSGRSSFTSLVVGVFVVYVVHTCWVMYGIVYTRPCAGATNCIQPYLARRPKLQLSVYTTTRSSLGAENNVDLVLNVEDFDVQSKFERTVNVSVPKKTRNNGTLYAYIFLHHAGVLPWHDGKQVHLVSPLTTYMIPKPEEINLLTGESAAQQQIEAEKKPSNALDEPVSHWRPRLTLNVMVEDFVFDGSSLPADVHRYMKMIQLGKTVHYLPILFIDQLSNRVKDLMVINRSTTELPLTVCYDKISLGRLRFWIHMQDAVYSLQQFGFSEKDADEVKGIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDISFWKKKKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLIPAGVGAAIELWKVKKALKMTVTWRGLRPRFQFGTYSECERKTEEYDTQAMKYLSYLLYPLCIGGAIYSLLNIKYKSWYSWLINSFVNGVYAFGFLFMLPQLFVNYKMKSVAHLPWKAFTYKVGPPPTGGGREPLQPSVLVAPFFLLEKSHREEPGAELSSGPGSNRLRGKKPDLMEERGPAQGKGPGHRATGAGGGQVSM
SIO_010081: Clptm1l
subclass of: SO_0000673
so part of: Clptm1l
location: complement(join(654775..654925,670187..670320,670421..670476,671069..671103,671517..671599,672146..672196,674002..674067,674962..675065,676468..676552,677274..677368,677657..677774,680041..680119,680895..681043,681992..682181,684079..684179,684616..684777))
location: region:654775-684777:-1
so has part: feature:684616-684777:-1:exon
so has part: feature:684079-684179:-1:exon
so has part: feature:681992-682181:-1:exon
so has part: feature:680895-681043:-1:exon
so has part: feature:680041-680119:-1:exon
so has part: feature:677657-677774:-1:exon
so has part: feature:677274-677368:-1:exon
so has part: feature:676468-676552:-1:exon
so has part: feature:674962-675065:-1:exon
so has part: feature:674002-674067:-1:exon
so has part: feature:672146-672196:-1:exon
so has part: feature:671517-671599:-1:exon
so has part: feature:671069-671103:-1:exon
so has part: feature:670421-670476:-1:exon
so has part: feature:670187-670320:-1:exon
so has part: feature:654775-654925:-1:exon

XP_048224540.1
type: Protein
SIO_000068: ncbiprotein

position:684777:-1
position: 684777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684616-684777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:684079-684179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:681992-682181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:680895-681043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:680041-680119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:677657-677774:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:677274-677368:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:676468-676552:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:674962-675065:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:674002-674067:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:672146-672196:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:671517-671599:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671069-671103:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:670421-670476:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:670187-670320:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:654775-654925:-1:exon

Slc6a3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Slc6a3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(699750..746724)
location: region:699750-746724:-1
so has part: feature:699750-746724:-1:exon
subclass of: SO_0000010

125367624
type: Gene
SIO_000068: ncbigene

position:699750:-1
position: 699750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746724:-1
position: 746724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699750-746724:-1:exon

Slc6a3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slc6a3
product: solute carrier family 6 member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048368307.1
SIO_010081: Slc6a3
subclass of: SO_0000673
so part of: Slc6a3
location: complement(join(699750..699886,702708..702779,706670..706837,707946..708046,709448..709547,710272..710400,711174..711286,715080..715204,716298..716401,716996..717130,717285..717423,722204..722435,743007..743138,744433..744759,746680..746724))
location: region:699750-746724:-1
so has part: feature:746680-746724:-1:exon
so has part: feature:744433-744759:-1:exon
so has part: feature:743007-743138:-1:exon
so has part: feature:722204-722435:-1:exon
so has part: feature:717285-717423:-1:exon
so has part: feature:716996-717130:-1:exon
so has part: feature:716298-716401:-1:exon
so has part: feature:715080-715204:-1:exon
so has part: feature:711174-711286:-1:exon
so has part: feature:710272-710400:-1:exon
so has part: feature:709448-709547:-1:exon
so has part: feature:707946-708046:-1:exon
so has part: feature:706670-706837:-1:exon
so has part: feature:702708-702779:-1:exon
so has part: feature:699750-699886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:746680-746724:-1:exon

position:746680:-1
position: 746680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744433-744759:-1:exon

position:744433:-1
position: 744433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744759:-1
position: 744759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:743007-743138:-1:exon

position:743007:-1
position: 743007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743138:-1
position: 743138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:722204-722435:-1:exon

position:722204:-1
position: 722204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722435:-1
position: 722435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:717285-717423:-1:exon

position:717285:-1
position: 717285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717423:-1
position: 717423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:716996-717130:-1:exon

position:716996:-1
position: 716996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717130:-1
position: 717130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:716298-716401:-1:exon

position:716298:-1
position: 716298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716401:-1
position: 716401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:715080-715204:-1:exon

position:715080:-1
position: 715080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715204:-1
position: 715204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:711174-711286:-1:exon

position:711174:-1
position: 711174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711286:-1
position: 711286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:710272-710400:-1:exon

position:710272:-1
position: 710272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710400:-1
position: 710400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:709448-709547:-1:exon

position:709448:-1
position: 709448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709547:-1
position: 709547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:707946-708046:-1:exon

position:707946:-1
position: 707946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708046:-1
position: 708046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:706670-706837:-1:exon

position:706670:-1
position: 706670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706837:-1
position: 706837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:702708-702779:-1:exon

position:702708:-1
position: 702708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702779:-1
position: 702779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:699750-699886:-1:exon

position:699886:-1
position: 699886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc6a3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slc6a3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent dopamine transporter
translation: MSKSKCAVGPMSSVVAPVEEPNATGPREVELILVKEQNGVQLTNSTLIKTPPTPGATQERETWSKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMIIAGMPLFYMELALGQFNREGAAGVWKICPVLKGVGFTVILISFYVGFFYNVIIAWALHYFFSSFTVDLPWIHCNNTWNSPNCSEAHAGNASGGTGANDTFRTTPAAEYFERGVLHLHQSRGIDDLGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGAMDGIRAYLSVDFYRLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIITTSINSLTSFSSGFVVFSFLGYMAQKHSVPIRDVATDGPGLIFIIYPEAIATLPLSSAWAVVFFIMLLTLGIDSAMGGMESVITGLIDEFQLLHRHREIFTLGIVLATFLLSLLCVTNGGIYVFTLLDHFAAGTSILFGVLIEAIGVAWFYGVQQFSEDIKQMTGQRPNLYWRLCWKLVSPCFLLFVVVVSIVTFRPPHYGSYIFPDWANVLGWAIAASSMAMVPIYATYKLCSLPGSFREKLAYAITPEKDRQLVDRGEVRQFTLRHWLLV
SIO_010081: Slc6a3
subclass of: SO_0000673
so part of: Slc6a3
location: complement(join(699863..699886,702708..702779,706670..706837,707946..708046,709448..709547,710272..710400,711174..711286,715080..715204,716298..716401,716996..717130,717285..717423,722204..722435,743007..743138,744433..744718))
location: region:699863-744718:-1
so has part: feature:744433-744718:-1:exon
so has part: feature:743007-743138:-1:exon
so has part: feature:722204-722435:-1:exon
so has part: feature:717285-717423:-1:exon
so has part: feature:716996-717130:-1:exon
so has part: feature:716298-716401:-1:exon
so has part: feature:715080-715204:-1:exon
so has part: feature:711174-711286:-1:exon
so has part: feature:710272-710400:-1:exon
so has part: feature:709448-709547:-1:exon
so has part: feature:707946-708046:-1:exon
so has part: feature:706670-706837:-1:exon
so has part: feature:702708-702779:-1:exon
so has part: feature:699863-699886:-1:exon

XP_048224264.1
type: Protein
SIO_000068: ncbiprotein

position:699863:-1
position: 699863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744718:-1
position: 744718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744433-744718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743007-743138:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:722204-722435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717285-717423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:716996-717130:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:716298-716401:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:715080-715204:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:711174-711286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:710272-710400:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:709448-709547:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:707946-708046:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:706670-706837:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:702708-702779:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:699863-699886:-1:exon

Lpcat1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Lpcat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(753418..798331)
location: region:753418-798331:-1
so has part: feature:753418-798331:-1:exon
subclass of: SO_0000010

125367693
type: Gene
SIO_000068: ncbigene

position:753418:-1
position: 753418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798331:-1
position: 798331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753418-798331:-1:exon

Lpcat1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Lpcat1
product: lysophosphatidylcholine acyltransferase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368390.1
SIO_010081: Lpcat1
subclass of: SO_0000673
so part of: Lpcat1
location: complement(join(753418..755211,756124..756265,757185..757283,757924..758077,758469..758594,759338..759420,761793..761847,762872..762906,763546..763604,766048..766108,767724..767836,771019..771233,778749..778891,798118..798331))
location: region:753418-798331:-1
so has part: feature:798118-798331:-1:exon
so has part: feature:778749-778891:-1:exon
so has part: feature:771019-771233:-1:exon
so has part: feature:767724-767836:-1:exon
so has part: feature:766048-766108:-1:exon
so has part: feature:763546-763604:-1:exon
so has part: feature:762872-762906:-1:exon
so has part: feature:761793-761847:-1:exon
so has part: feature:759338-759420:-1:exon
so has part: feature:758469-758594:-1:exon
so has part: feature:757924-758077:-1:exon
so has part: feature:757185-757283:-1:exon
so has part: feature:756124-756265:-1:exon
so has part: feature:753418-755211:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:798118-798331:-1:exon

position:798118:-1
position: 798118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:778749-778891:-1:exon

position:778749:-1
position: 778749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778891:-1
position: 778891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:771019-771233:-1:exon

position:771019:-1
position: 771019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771233:-1
position: 771233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:767724-767836:-1:exon

position:767724:-1
position: 767724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767836:-1
position: 767836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:766048-766108:-1:exon

position:766048:-1
position: 766048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766108:-1
position: 766108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:763546-763604:-1:exon

position:763546:-1
position: 763546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763604:-1
position: 763604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:762872-762906:-1:exon

position:762872:-1
position: 762872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762906:-1
position: 762906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:761793-761847:-1:exon

position:761793:-1
position: 761793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761847:-1
position: 761847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:759338-759420:-1:exon

position:759338:-1
position: 759338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759420:-1
position: 759420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:758469-758594:-1:exon

position:758469:-1
position: 758469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758594:-1
position: 758594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:757924-758077:-1:exon

position:757924:-1
position: 757924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758077:-1
position: 758077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:757185-757283:-1:exon

position:757185:-1
position: 757185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757283:-1
position: 757283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:756124-756265:-1:exon

position:756124:-1
position: 756124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756265:-1
position: 756265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:753418-755211:-1:exon

position:755211:-1
position: 755211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Lpcat1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Lpcat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysophosphatidylcholine acyltransferase 1
translation: MRLRGRALRAAPAPGARADAAPRLAPPGRNPFVHELRLSALQKAQVAIMTLTLFPIRLLFAAFMMLLAWPLALVASLGPADKEPEQSLALWRKVVDFLLKAIMRTMWFAGGFHRVTVKGQQALPTEAAILTLAPHSSYFDAIPVTMTMSSIVMKAESRNIPIWGTLIRYIRPVFVSRSDQDSRRKTVEEIKRRAQSSGTWPQIMIFPEGTCTNRTCLITFKPGAFIPGVPVQPVVLRYPNKLDTITWTWQGPGALEILWLTLCQFHNQVEIEFLPVYRPSEEERRNPSLYASNVRRVMAEALGISVTDYTFEDCQLALAEGQLRLPADTCLLEFARLVRGLGLKPEKLEKDLDKYSESARTRSGQGIDLSEFAAFLEVPVSDTLADMFSLFDESGDGKMDLREYVVALSVVCRPSRTLDTIQLAFKMYGSPEDSSIAENELSRILRTALGVAELRVTDLFQAIDREEKGKITFADFSRFAETAPDFAEEYLYPDQTRLDSGTPAPPAPVRNGFCADFSPDGLGAGSQPPHKKLD
SIO_010081: Lpcat1
subclass of: SO_0000673
so part of: Lpcat1
location: complement(join(755027..755211,756124..756265,757185..757283,757924..758077,758469..758594,759338..759420,761793..761847,762872..762906,763546..763604,766048..766108,767724..767836,771019..771233,778749..778891,798118..798252))
location: region:755027-798252:-1
so has part: feature:798118-798252:-1:exon
so has part: feature:778749-778891:-1:exon
so has part: feature:771019-771233:-1:exon
so has part: feature:767724-767836:-1:exon
so has part: feature:766048-766108:-1:exon
so has part: feature:763546-763604:-1:exon
so has part: feature:762872-762906:-1:exon
so has part: feature:761793-761847:-1:exon
so has part: feature:759338-759420:-1:exon
so has part: feature:758469-758594:-1:exon
so has part: feature:757924-758077:-1:exon
so has part: feature:757185-757283:-1:exon
so has part: feature:756124-756265:-1:exon
so has part: feature:755027-755211:-1:exon

XP_048224347.1
type: Protein
SIO_000068: ncbiprotein

position:755027:-1
position: 755027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798252:-1
position: 798252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798118-798252:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778749-778891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:771019-771233:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:767724-767836:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:766048-766108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:763546-763604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:762872-762906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:761793-761847:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:759338-759420:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:758469-758594:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:757924-758077:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:757185-757283:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:756124-756265:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:755027-755211:-1:exon

Mrpl36
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Mrpl36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(900941..901687)
location: region:900941-901687:-1
so has part: feature:900941-901687:-1:exon
subclass of: SO_0000010

125367674
type: Gene
SIO_000068: ncbigene

position:900941:-1
position: 900941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901687:-1
position: 901687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:900941-901687:-1:exon

Mrpl36
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Mrpl36
product: mitochondrial ribosomal protein L36
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048368358.1
SIO_010081: Mrpl36
subclass of: SO_0000673
so part of: Mrpl36
location: complement(join(900941..901277,901443..901687))
location: region:900941-901687:-1
so has part: feature:901443-901687:-1:exon
so has part: feature:900941-901277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901443-901687:-1:exon

position:901443:-1
position: 901443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:900941-901277:-1:exon

position:901277:-1
position: 901277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mrpl36
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Mrpl36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L36, mitochondrial
translation: MAAAWLRAALASVAEPLLHLRRAALAAFPPPPPGPPGPLGPLGPQPALGFKSKVSLRKRCRDCYLVKRRGRWFVLCRTHPRHKQRQL
SIO_010081: Mrpl36
subclass of: SO_0000673
so part of: Mrpl36
location: complement(901000..901263)
location: region:901000-901263:-1
so has part: feature:901000-901263:-1:exon

XP_048224315.1
type: Protein
SIO_000068: ncbiprotein

position:901000:-1
position: 901000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901263:-1
position: 901263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901000-901263:-1:exon

Ndufs6
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ndufs6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 903590..914168
location: region:903590-914168:1
so has part: feature:903590-914168:1:exon
subclass of: SO_0000010

125367673
type: Gene
SIO_000068: ncbigene

position:903590:1
position: 903590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914168:1
position: 914168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903590-914168:1:exon

Ndufs6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ndufs6
product: NADH:ubiquinone oxidoreductase subunit S6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368356.1
SIO_010081: Ndufs6
subclass of: SO_0000673
so part of: Ndufs6
location: join(903590..903737,904983..905036,913502..913623,914000..914168)
location: region:903590-914168:1
so has part: feature:903590-903737:1:exon
so has part: feature:904983-905036:1:exon
so has part: feature:913502-913623:1:exon
so has part: feature:914000-914168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:903590-903737:1:exon

position:903737:1
position: 903737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:904983-905036:1:exon

position:904983:1
position: 904983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905036:1
position: 905036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:913502-913623:1:exon

position:913502:1
position: 913502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913623:1
position: 913623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:914000-914168:1:exon

position:914000:1
position: 914000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ndufs6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ndufs6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
translation: MAALVTFRRLLPRGVRSFGVQLAPTGEKITHTGQVYDDKDYRKVRFVGRQKEVNKNFAIELIAEQPVSEVEHRVIACDGGGGALGHPKVYINLDKETKTDCGYCGLQFKQHPH
SIO_010081: Ndufs6
subclass of: SO_0000673
so part of: Ndufs6
location: join(903636..903737,904983..905036,913502..913623,914000..914063)
location: region:903636-914063:1
so has part: feature:903636-903737:1:exon
so has part: feature:904983-905036:1:exon
so has part: feature:913502-913623:1:exon
so has part: feature:914000-914063:1:exon

XP_048224313.1
type: Protein
SIO_000068: ncbiprotein

position:903636:1
position: 903636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914063:1
position: 914063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903636-903737:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:904983-905036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:913502-913623:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:914000-914063:1:exon

LOC125367865
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(921120..940267)
location: region:921120-940267:-1
so has part: feature:921120-940267:-1:exon
subclass of: SO_0000010

125367865
type: Gene
SIO_000068: ncbigene

position:921120:-1
position: 921120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940267:-1
position: 940267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921120-940267:-1:exon

LOC125367865
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125367865
product: collagen alpha-1(I) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_048368584.1
SIO_010081: LOC125367865
subclass of: SO_0000673
so part of: LOC125367865
location: complement(join(921120..923382,932102..932266,933887..934279,935110..935644,939841..940054,940211..940267))
location: region:921120-940267:-1
so has part: feature:940211-940267:-1:exon
so has part: feature:939841-940054:-1:exon
so has part: feature:935110-935644:-1:exon
so has part: feature:933887-934279:-1:exon
so has part: feature:932102-932266:-1:exon
so has part: feature:921120-923382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:940211-940267:-1:exon

position:940211:-1
position: 940211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:939841-940054:-1:exon

position:939841:-1
position: 939841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940054:-1
position: 940054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:935110-935644:-1:exon

position:935110:-1
position: 935110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935644:-1
position: 935644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:933887-934279:-1:exon

position:933887:-1
position: 933887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934279:-1
position: 934279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:932102-932266:-1:exon

position:932102:-1
position: 932102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932266:-1
position: 932266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:921120-923382:-1:exon

position:923382:-1
position: 923382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125367865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125367865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(I) chain-like
translation: MVSQAPEVAKAPNTTAFSPERWALRSHAECTRGPRHPPASPQHTPAPPPRPASPQGARFPSYPTVPASDCPFPSPRSGVVPSPGGLGKEPEPAPARCARGLELGKVARTPGHTPPTPGRGRRALGGRVVSLAAPRVPTGPLPKETPSPLSRKEGPAARRPSLPFLGPGGQQVSGRSQPGGLRAAGPGRPAAAGAKRRLSSPGWERARRAGRAPRPPQGRKVGARPPQGRRVGAQPPQGRKVGAPGGWLVSSDSAGAHPAPGRRAFRIPRMKPSDEARAEAGGGGRAPLRPCRPWMGGRKAPEPGREPRGRSLLLMRVEGGLLAGVEQARPGEACGRREGGRGARRDPSPRGARRGEAGRPGADRGPASGEPRSAAASLCCWQMQPCAYVVRTGVYRMHARCDRNPGPPGPAPPREFARDQPGSHVLRDAAPGSPAPAGRTELSALRHAGGPFVHPLRGAHRALSTPPVTCGAQAARGSQGPVHTACHLRGTGCAGLTGPCLHRLSGAQAARGSQGPVHTACHLRGTAARGSQGPVHTACQGHRLRGAHRALSTPPVTCGAQAVRGSQGPVHTACHLRGSGCSRITGPCPPPPVTCGAQAARSSQGPVHTACHLRGTGCAGSQGPVHTACHLRGTGCAGLTGPCLHRLSGAQAARGSTGPCPHRLSPAGHRLRGAHRALSTPPVRGTGCAGLTGPCPHRLSGAQAARGSQGPVHTACHLRGHRLRGAHRALSTPPVTCGAQAARGSQGPVHTACHLRDTGCAGLTGPCPHRLSPAGHRLLRDHRALSTPPVTCGAQAARGSQGPVHTACHLRGTGLRGAHRALSTPPVTCGAQAAPGSQGPVHTACHLRGTGCAGLTGPCPHRLSPAGHRLLRDHRALSTPPVRGTGCAGLTGPCPHHLCHLRGTGCAGLTGPCPHRLSPAGHRLRGAHRALSTPPVTCGAPAARGSQGPVHTACQGHRLRGAHRALSTPPVTCGGTGCTGLTGPCPHHLCHLRGIRVDTWGRTPQRDRDRDSGSRGGLHSPREGSRGQEHRAPPRDGRTVEWREEHPTRGPRSPHEAGGSTWPRDIERAQNVRRVPKLHRRESHEASSTGSPKPSLWGTPGDADRVGSPGGDRASSKTTEEQRSQGSHSPEPPSRHPGLLIVICHLLPPGRNADPEIDEGGGGEGPASERSYQHSAYSFTQHLVKGDGAAVLLPPRRCLKKTAMRPES
SIO_010081: LOC125367865
subclass of: SO_0000673
so part of: LOC125367865
location: complement(join(921120..923382,932102..932266,933887..934279,935110..935644,939841..940054,940211..940267))
location: region:921120-940267:-1
so has part: feature:940211-940267:-1:exon
so has part: feature:939841-940054:-1:exon
so has part: feature:935110-935644:-1:exon
so has part: feature:933887-934279:-1:exon
so has part: feature:932102-932266:-1:exon
so has part: feature:921120-923382:-1:exon

XP_048224541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:940211-940267:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:939841-940054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:935110-935644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:933887-934279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:932102-932266:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:921120-923382:-1:exon

LOC125367666
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367666
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(950406..954847)
location: region:950406-954847:-1
so has part: feature:950406-954847:-1:exon
subclass of: SO_0000010

125367666
type: Gene
SIO_000068: ncbigene

position:950406:-1
position: 950406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954847:-1
position: 954847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950406-954847:-1:exon

LOC125367666
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125367666
product: iroquois-class homeodomain protein IRX-4-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048368347.1
SIO_010081: LOC125367666
subclass of: SO_0000673
so part of: LOC125367666
location: complement(join(950406..951202,951614..951960,952715..952824,954324..954574,954803..954847))
location: region:950406-954847:-1
so has part: feature:954803-954847:-1:exon
so has part: feature:954324-954574:-1:exon
so has part: feature:952715-952824:-1:exon
so has part: feature:951614-951960:-1:exon
so has part: feature:950406-951202:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:954803-954847:-1:exon

position:954803:-1
position: 954803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:954324-954574:-1:exon

position:954324:-1
position: 954324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954574:-1
position: 954574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:952715-952824:-1:exon

position:952715:-1
position: 952715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952824:-1
position: 952824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:951614-951960:-1:exon

position:951614:-1
position: 951614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951960:-1
position: 951960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:950406-951202:-1:exon

position:951202:-1
position: 951202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125367666
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125367666
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-4-like
translation: MSYPQFGYPYSSAPQFLMATNSLSACCEPGGRPLAEPGPAAPAQAPVYCPVYESRLLATARHELNSAAALGVYGGPYGGAXGYGNYVTYGSEASAFYSLNSFESKDGAGSAHAGLGPAAAAYYPYEPALSQYPYDRYGTMDSGTRRKNATRETTATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCADEKRPYGEGEEEEEEEEEEAGEEEARGEAPKSAKSEEPVGKEDKELELSDLDDFDPLEAXTPECEPKAAFQPLDGSLDRVPATPEGPGRRGKETSGALRGALASSGXAGRSEDVERARSCLRGVVAGLEPQPGGGPPARGEAQLGFVPAGAPAGLEAKPRIWSLAQTATALSQTEFPSCMLKRRGPAASSAPPATPPAAPAPAGGALDRHQDSPVTSLRNWVDGVFHDPILRHSTLNQAWAAAKGALLDPXPAGRSLGAGAGVLTTPLARAFPPATPHDTPTASAARELLAVPKAGGEPFCA
SIO_010081: LOC125367666
subclass of: SO_0000673
so part of: LOC125367666
location: complement(join(950406..951202,951614..951960,952715..952824,954324..954574,954803..954847))
location: region:950406-954847:-1
so has part: feature:954803-954847:-1:exon
so has part: feature:954324-954574:-1:exon
so has part: feature:952715-952824:-1:exon
so has part: feature:951614-951960:-1:exon
so has part: feature:950406-951202:-1:exon

XP_048224304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:954803-954847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954324-954574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:952715-952824:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:951614-951960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:950406-951202:-1:exon

LOC125367665
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367665
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(968082..972614)
location: region:968082-972614:-1
so has part: feature:968082-972614:-1:exon
subclass of: SO_0000010

125367665
type: Gene
SIO_000068: ncbigene

position:968082:-1
position: 968082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972614:-1
position: 972614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:968082-972614:-1:exon

LOC125367665
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125367665
product: iroquois-class homeodomain protein IRX-4-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048368346.1
SIO_010081: LOC125367665
subclass of: SO_0000673
so part of: LOC125367665
location: complement(join(968082..968882,969299..969645,970411..970520,972088..972339,972570..972614))
location: region:968082-972614:-1
so has part: feature:972570-972614:-1:exon
so has part: feature:972088-972339:-1:exon
so has part: feature:970411-970520:-1:exon
so has part: feature:969299-969645:-1:exon
so has part: feature:968082-968882:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:972570-972614:-1:exon

position:972570:-1
position: 972570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972088-972339:-1:exon

position:972088:-1
position: 972088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972339:-1
position: 972339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:970411-970520:-1:exon

position:970411:-1
position: 970411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970520:-1
position: 970520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:969299-969645:-1:exon

position:969299:-1
position: 969299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969645:-1
position: 969645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:968082-968882:-1:exon

position:968882:-1
position: 968882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125367665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125367665
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-4-like
translation: MSYPQFGYPYSSAPQFLMATNSVSACCEPGGRPLAEPGPAAPAQAPVYCPVYESRLLATARHELNSAAALGVYGGPYGGAQGYGNYVTYGSEASAFYSLNSFESKDGAGSAHTGLGPAAAAYYPYEPALSQYPYDRYGTMDSGTRRKNATRETTATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCADEKRPYGEGEEEEEEEEEEAGEEEARGEAPKSAKSEEPVGKEDKELELSDLDDFDPLEAATPECEPKAAFQPLDGSLDRVPATPEGPGRRGKETSGALRGALASSGRPAGSEDVERARSCLRGVVAGLEPQPGGGPPARGEAQLGFVPAGAPAGLEAKPRIWSLAQTATALSQTEFPSCMLKRRGPAASSAPPATPPAAPAPAXGGALDRHQDSPVTSLRNWVDGVFHDPILRHSTLNQAWAAAKGALLDPGPAGRSLGAGAGVLTTPLARAFPPATPHDTPTASAARELLAVPKAGGEPFCA
SIO_010081: LOC125367665
subclass of: SO_0000673
so part of: LOC125367665
location: complement(join(968082..968882,969299..969645,970411..970520,972088..972339,972570..972614))
location: region:968082-972614:-1
so has part: feature:972570-972614:-1:exon
so has part: feature:972088-972339:-1:exon
so has part: feature:970411-970520:-1:exon
so has part: feature:969299-969645:-1:exon
so has part: feature:968082-968882:-1:exon

XP_048224303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:972570-972614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972088-972339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:970411-970520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:969299-969645:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968082-968882:-1:exon

LOC125367889
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367889
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 1150592..1150638
location: region:1150592-1150638:1
so has part: feature:1150592-1150638:1:exon

125367889
type: Gene
SIO_000068: ncbigene

position:1150592:1
position: 1150592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150638:1
position: 1150638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150592-1150638:1:exon

LOC125367889
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125367889
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00619
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC125367889
subclass of: SO_0000673
so part of: LOC125367889
location: 1150592..1150638
location: region:1150592-1150638:1
so has part: feature:1150592-1150638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1150592-1150638:1:exon

Irx2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Irx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1398844..1403838)
location: region:1398844-1403838:-1
so has part: feature:1398844-1403838:-1:exon
subclass of: SO_0000010

125367668
type: Gene
SIO_000068: ncbigene

position:1398844:-1
position: 1398844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1403838:-1
position: 1403838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1398844-1403838:-1:exon

Irx2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Irx2
product: iroquois homeobox 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368349.1
SIO_010081: Irx2
subclass of: SO_0000673
so part of: Irx2
location: complement(join(1398844..1400487,1401107..1401814,1402019..1402421,1403505..1403838))
location: region:1398844-1403838:-1
so has part: feature:1403505-1403838:-1:exon
so has part: feature:1402019-1402421:-1:exon
so has part: feature:1401107-1401814:-1:exon
so has part: feature:1398844-1400487:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1403505-1403838:-1:exon

position:1403505:-1
position: 1403505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1402019-1402421:-1:exon

position:1402019:-1
position: 1402019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402421:-1
position: 1402421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1401107-1401814:-1:exon

position:1401107:-1
position: 1401107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1401814:-1
position: 1401814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1398844-1400487:-1:exon

position:1400487:-1
position: 1400487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Irx2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Irx2
product: iroquois homeobox 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368350.1
SIO_010081: Irx2
subclass of: SO_0000673
so part of: Irx2
location: complement(join(1398844..1399827,1400412..1400487,1401107..1401814,1402019..1402421,1403505..1403837))
location: region:1398844-1403837:-1
so has part: feature:1403505-1403837:-1:exon
so has part: feature:1402019-1402421:-1:exon
so has part: feature:1401107-1401814:-1:exon
so has part: feature:1400412-1400487:-1:exon
so has part: feature:1398844-1399827:-1:exon

position:1403837:-1
position: 1403837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403505-1403837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1402019-1402421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1401107-1401814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1400412-1400487:-1:exon

position:1400412:-1
position: 1400412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1398844-1399827:-1:exon

position:1399827:-1
position: 1399827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Irx2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Irx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iroquois-class homeodomain protein IRX-2
translation: MSYPQGYLYQAPGSLALYSCPAYGASALAAPRSEELARSASGSAFSPYPGSAAFTAQAATGFGSPLQYSADAAAAAAAGFPSYMGAPYDTHTTGVTGAISYHPYGSAAYPYQLNDPAYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKSEDEDEDEGDAARGKGSPDKGHEGAETSAEDEGISLHVDSLTDHSCSAAESDGEKLPCRAGDPLCESGSECKDKFDELEDEDDDEEDCERDLAPPKPATSSPLTGLEAPLLSPRPEAGPRGKAPPGSRTSPGAPPPASKPKLWSLAEIATSDLKQPSSGPGGGPPGLPAPAAPASSGAPPGGPAYPASPLLGRPLYYTSPFYGNYTNYGNLNAALQGPGLLRYNAAAAAPGDSGHAAPKAAGDAGKAGAPALEPHYRPPGGGGYEPKKDTSEGCAVVGPGVQPYL
SIO_010081: Irx2
subclass of: SO_0000673
so part of: Irx2
location: complement(join(1400435..1400487,1401107..1401814,1402019..1402421,1403505..1403756))
location: region:1400435-1403756:-1
so has part: feature:1403505-1403756:-1:exon
so has part: feature:1402019-1402421:-1:exon
so has part: feature:1401107-1401814:-1:exon
so has part: feature:1400435-1400487:-1:exon

XP_048224306.1
type: Protein
SIO_000068: ncbiprotein

position:1400435:-1
position: 1400435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1403756:-1
position: 1403756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403505-1403756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1402019-1402421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1401107-1401814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1400435-1400487:-1:exon

Irx2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Irx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iroquois-class homeodomain protein IRX-2
translation: MSYPQGYLYQAPGSLALYSCPAYGASALAAPRSEELARSASGSAFSPYPGSAAFTAQAATGFGSPLQYSADAAAAAAAGFPSYMGAPYDTHTTGVTGAISYHPYGSAAYPYQLNDPAYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKSEDEDEDEGDAARGKGSPDKGHEGAETSAEDEGISLHVDSLTDHSCSAAESDGEKLPCRAGDPLCESGSECKDKFDELEDEDDDEEDCERDLAPPKPATSSPLTGLEAPLLSPRPEAGPRGKAPPGSRTSPGAPPPASKPKLWSLAEIATSDLKQPSSGPGGGPPGLPAPAAPASSGAPPGGPAYPASPLLGRPLYYTSPFYGNYTNYGNLNAALQGPGLLRYNAAAAAPGDSGHAAPKAAGDAGKAGAPALEPHYRPPGGGGYEPKKDTSEGCAVVGPGVQPYL
SIO_010081: Irx2
subclass of: SO_0000673
so part of: Irx2
location: complement(join(1400435..1400487,1401107..1401814,1402019..1402421,1403505..1403756))
location: region:1400435-1403756:-1
so has part: feature:1403505-1403756:-1:exon
so has part: feature:1402019-1402421:-1:exon
so has part: feature:1401107-1401814:-1:exon
so has part: feature:1400435-1400487:-1:exon

XP_048224307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1403505-1403756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1402019-1402421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1401107-1401814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1400435-1400487:-1:exon

LOC125367671
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367671
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1404476..1407493
location: region:1404476-1407493:1
so has part: feature:1404476-1407493:1:exon
subclass of: SO_0000010

125367671
type: Gene
SIO_000068: ncbigene

position:1404476:1
position: 1404476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1407493:1
position: 1407493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1404476-1407493:1:exon

LOC125367671
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125367671
product: pulmonary surfactant-associated protein D-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048368354.1
SIO_010081: LOC125367671
subclass of: SO_0000673
so part of: LOC125367671
location: join(1404476..1405090,1406914..1407493)
location: region:1404476-1407493:1
so has part: feature:1404476-1405090:1:exon
so has part: feature:1406914-1407493:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1404476-1405090:1:exon

position:1405090:1
position: 1405090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1406914-1407493:1:exon

position:1406914:1
position: 1406914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125367671
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125367671
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pulmonary surfactant-associated protein D-like
translation: MSPPPDGTRGHRRRGGAGRVTAVKAVKPSEPGGGADGRAHPASPRGGSHERNAASVPGPFGSADGREGPAGRAASRVAGGRGRKRARHRAAGGEGALCPATAGSAGHGAASPLRPRPRPRPGLHRAPPASSQAGFAQGVGKTTFRCFQ
SIO_010081: LOC125367671
subclass of: SO_0000673
so part of: LOC125367671
location: join(1405027..1405090,1406914..1407296)
location: region:1405027-1407296:1
so has part: feature:1405027-1405090:1:exon
so has part: feature:1406914-1407296:1:exon

XP_048224311.1
type: Protein
SIO_000068: ncbiprotein

position:1405027:1
position: 1405027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1407296:1
position: 1407296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1405027-1405090:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1406914-1407296:1:exon

LOC125367388
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1466779..1471068)
location: region:1466779-1471068:-1
so has part: feature:1466779-1471068:-1:exon
subclass of: SO_0000010

125367388
type: Gene
SIO_000068: ncbigene

position:1466779:-1
position: 1466779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471068:-1
position: 1471068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466779-1471068:-1:exon

LOC125367388
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125367388
product: hyphal wall protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048368034.1
SIO_010081: LOC125367388
subclass of: SO_0000673
so part of: LOC125367388
location: complement(join(1466779..1467574,1468722..1468998,1470861..1471068))
location: region:1466779-1471068:-1
so has part: feature:1470861-1471068:-1:exon
so has part: feature:1468722-1468998:-1:exon
so has part: feature:1466779-1467574:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1470861-1471068:-1:exon

position:1470861:-1
position: 1470861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1468722-1468998:-1:exon

position:1468722:-1
position: 1468722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1468998:-1
position: 1468998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1466779-1467574:-1:exon

position:1467574:-1
position: 1467574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125367388
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125367388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyphal wall protein 2-like
translation: MQCEPRARAFPPSGRRPAGTALFPADPGRSALGGEWLAYPGRGPGQQRGSSTPTPKCPAPGGPVRRVKEAPQELYHPITVNQHPRNFTNHPITENQHLRDSTNHPITVKQHPRNSTNHPITVNQHPRNFTNHPITVNQHPRNFTNHPITVKQHLRNFTTPSLASQHPRNSTNHPATASQHLRNSTNHPITVNQHLRDFTNHPATASQHLRNSTNHPATASQHPRNSTNHPATASQHLRNSTNHPITVNQHLWNFTNHPITVNQHPRNFTNHPITVNQHPRDSTNHPATASQHPRNSTNHPATASQHPRDSTNQPATASQHLRNFTTPATASQHPRDSTTHPVTTSQHPRNSSNHPITVNQHPRNFTNHLITVNQHPRNFTTHPITVNQHPRDSTNHPITVNQHLRNFTNQPITVNQHPRNFTTPSL
SIO_010081: LOC125367388
subclass of: SO_0000673
so part of: LOC125367388
location: complement(join(1466779..1467574,1468722..1468998,1470861..1471068))
location: region:1466779-1471068:-1
so has part: feature:1470861-1471068:-1:exon
so has part: feature:1468722-1468998:-1:exon
so has part: feature:1466779-1467574:-1:exon

XP_048223991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1470861-1471068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1468722-1468998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1466779-1467574:-1:exon

Irx1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Irx1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1816444..1821728
location: region:1816444-1821728:1
so has part: feature:1816444-1821728:1:exon
subclass of: SO_0000010

125367667
type: Gene
SIO_000068: ncbigene

position:1816444:1
position: 1816444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1821728:1
position: 1821728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1816444-1821728:1:exon

Irx1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Irx1
product: iroquois homeobox 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368348.1
SIO_010081: Irx1
subclass of: SO_0000673
so part of: Irx1
location: join(1816444..1816924,1819735..1820764,1820961..1821033,1821318..1821728)
location: region:1816444-1821728:1
so has part: feature:1816444-1816924:1:exon
so has part: feature:1819735-1820764:1:exon
so has part: feature:1820961-1821033:1:exon
so has part: feature:1821318-1821728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1816444-1816924:1:exon

position:1816924:1
position: 1816924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1819735-1820764:1:exon

position:1819735:1
position: 1819735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1820764:1
position: 1820764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1820961-1821033:1:exon

position:1820961:1
position: 1820961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1821033:1
position: 1821033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1821318-1821728:1:exon

position:1821318:1
position: 1821318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Irx1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Irx1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iroquois-class homeodomain protein IRX-1
translation: MSFPQLGYPQYLSAAGPGAYGGERPGVLAAAAAAAAAASSGRPGAAELGAGAGAAAVTSVLGMYAAAGPYAGAPNYSAFLPYAADLSLFSQMGSQYELKDNPGVHPATFAAHTAPAYYPYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESIDIDKIDEHDGDQSNEDEEDKAEAPRAPAAPTSVLARDRSSPLAAADLLKPPDSPLGLAKEIPDPGSTRLLSPGSAATGGLQGAPNSKPKIWSLAETATSPDGAPKASPPPPAGHPGGAHGLQHPAFLPSHGLYTCHIGKFSNWTNGAFLAQGSLLNMRSFLGVGAPHAAPHGPHLSAPPPAQPPVAVAAAGALHVDKASARCSPALPERDLVPTPDSPAQQLKSPFQPVRDNSLAPQEGTPRILAALPSA
SIO_010081: Irx1
subclass of: SO_0000673
so part of: Irx1
location: join(1816649..1816924,1819735..1820764,1820961..1821033,1821318..1821375)
location: region:1816649-1821375:1
so has part: feature:1816649-1816924:1:exon
so has part: feature:1819735-1820764:1:exon
so has part: feature:1820961-1821033:1:exon
so has part: feature:1821318-1821375:1:exon

XP_048224305.1
type: Protein
SIO_000068: ncbiprotein

position:1816649:1
position: 1816649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1821375:1
position: 1821375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1816649-1816924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1819735-1820764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1820961-1821033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1821318-1821375:1:exon

Adamts16
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Adamts16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2558780..2659364
location: region:2558780-2659364:1
so has part: feature:2558780-2659364:1:exon
subclass of: SO_0000010

125367390
type: Gene
SIO_000068: ncbigene

position:2558780:1
position: 2558780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2659364:1
position: 2659364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2558780-2659364:1:exon

Adamts16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Adamts16
product: ADAM metallopeptidase with thrombospondin type 1 motif 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048368035.1
SIO_010081: Adamts16
subclass of: SO_0000673
so part of: Adamts16
location: join(2558780..2558863,2558978..2559110,2564325..2564650,2588519..2588795,2592009..2592208,2593697..2593780,2595900..2596059,2597786..2597891,2603499..2603636,2611013..2611166,2619815..2619910,2622794..2622942,2623640..2623812,2625813..2625943,2627648..2627771,2627982..2628226,2629155..2629293,2632819..2632945,2652503..2652704,2652828..2653022,2654309..2654524,2657265..2657412,2659249..2659364)
location: region:2558780-2659364:1
so has part: feature:2558780-2558863:1:exon
so has part: feature:2558978-2559110:1:exon
so has part: feature:2564325-2564650:1:exon
so has part: feature:2588519-2588795:1:exon
so has part: feature:2592009-2592208:1:exon
so has part: feature:2593697-2593780:1:exon
so has part: feature:2595900-2596059:1:exon
so has part: feature:2597786-2597891:1:exon
so has part: feature:2603499-2603636:1:exon
so has part: feature:2611013-2611166:1:exon
so has part: feature:2619815-2619910:1:exon
so has part: feature:2622794-2622942:1:exon
so has part: feature:2623640-2623812:1:exon
so has part: feature:2625813-2625943:1:exon
so has part: feature:2627648-2627771:1:exon
so has part: feature:2627982-2628226:1:exon
so has part: feature:2629155-2629293:1:exon
so has part: feature:2632819-2632945:1:exon
so has part: feature:2652503-2652704:1:exon
so has part: feature:2652828-2653022:1:exon
so has part: feature:2654309-2654524:1:exon
so has part: feature:2657265-2657412:1:exon
so has part: feature:2659249-2659364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2558780-2558863:1:exon

position:2558863:1
position: 2558863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2558978-2559110:1:exon

position:2558978:1
position: 2558978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2559110:1
position: 2559110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2564325-2564650:1:exon

position:2564325:1
position: 2564325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2564650:1
position: 2564650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2588519-2588795:1:exon

position:2588519:1
position: 2588519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2588795:1
position: 2588795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2592009-2592208:1:exon

position:2592009:1
position: 2592009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2592208:1
position: 2592208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2593697-2593780:1:exon

position:2593697:1
position: 2593697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2593780:1
position: 2593780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2595900-2596059:1:exon

position:2595900:1
position: 2595900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2596059:1
position: 2596059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2597786-2597891:1:exon

position:2597786:1
position: 2597786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2597891:1
position: 2597891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2603499-2603636:1:exon

position:2603499:1
position: 2603499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2603636:1
position: 2603636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2611013-2611166:1:exon

position:2611013:1
position: 2611013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2611166:1
position: 2611166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2619815-2619910:1:exon

position:2619815:1
position: 2619815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2619910:1
position: 2619910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2622794-2622942:1:exon

position:2622794:1
position: 2622794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2622942:1
position: 2622942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2623640-2623812:1:exon

position:2623640:1
position: 2623640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2623812:1
position: 2623812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2625813-2625943:1:exon

position:2625813:1
position: 2625813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2625943:1
position: 2625943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2627648-2627771:1:exon

position:2627648:1
position: 2627648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2627771:1
position: 2627771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2627982-2628226:1:exon

position:2627982:1
position: 2627982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2628226:1
position: 2628226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2629155-2629293:1:exon

position:2629155:1
position: 2629155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2629293:1
position: 2629293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2632819-2632945:1:exon

position:2632819:1
position: 2632819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2632945:1
position: 2632945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2652503-2652704:1:exon

position:2652503:1
position: 2652503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2652704:1
position: 2652704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2652828-2653022:1:exon

position:2652828:1
position: 2652828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2653022:1
position: 2653022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2654309-2654524:1:exon

position:2654309:1
position: 2654309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2654524:1
position: 2654524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2657265-2657412:1:exon

position:2657265:1
position: 2657265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2657412:1
position: 2657412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2659249-2659364:1:exon

position:2659249:1
position: 2659249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Adamts16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Adamts16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A disintegrin and metalloproteinase with thrombospondin motifs 16
translation: MGAARTAGRGAGAGLALRGLLLAGVLLRCRPVAAVSPQAPARALGAAATAAGSPGGAPSPPPAERPGGAEGGEYDLVSAYEVDHRGEFVSHEITHHQRRRREADQQGGGTLHLRLKGIRHDFHLELEVASRLLAPGFLVQTLGKRGTKSVRAFPAEDLCFYQGSLRAHRNSSVALSTCQGLSGMIRTEEADYFLKPLPESLAGTLSGHPPAGPCSPSHMLYKRSTEPQAPQAPWANEILTVARKRELASRSLRDDSHGPGLQQKQHFCGRRKKYMPQPPTEDLFVLPDEYAPGPRHKRSLLKSPRQEELNVETLVVVDNKMMQNHGHDNITTYVLTVLNMVSALFKDGTIGGNINIAIVGLILLEDEQPGLVISHHADRTLSSFCQWQSGLMGKDGTRHDHAILLTGLDICSWKNEPCDTLGFAPISGMCSKYRSCTINEDTGLGLAFTIAHESGHNFGMVHDGEGNVCKKSEGNIMSPTLAGRNGVFSWSPCSRQYLHQFLSTAQAVCLADQPKPVTEYQYPEELPGELYDANTQCKWQFGEKAKLCLLGFTKDICKALWCHRVGRKCETKFMPAAEGTVCGQDMWCRGGQCVKYGDEGPRPTHGHWSDWSPWSPCSRTCGGGVSHRDRLCTNPRPSHGGKFCVGSTRALQLCNSQNCPRGSPDFRAAQCAEYDSKRFRGWHYKWKPYTQVEDQDLCKLYCIAEGFDFFFSLSNKVKDGTPCSEDSRNVCVDGMCERVGCDNVLGSDAAEDSCGVCRGNNSGCALHRGLYSRQHPARHYYHVVTIPPGARSIRVYETNESTSYLSVRNALNTYYLNGHWTVDWPGRYRFSGTAFDYKRPFKEPESLTAAGPTNETLVIELLFQGRNPGVAWEYSLPREGVERRPPAPPSYAWAVLRSDCSVSCGGGQMTTREGCFRDLRVPVNASFCNPETRPVTGLVSCERPACPPSWSVGNWSACSRTCGGGTQSRPVRCTRRARDRAEPVPAGRCPRPAPSARRACHAQSCPPAWSTGPWAECSRSCGKGWRKRSAVCKSTDPGAGPQLLPGAACAAEPKPRLQEACALKRCPKLRKLRWLVSAWAQCSVTCGRGTQKRFLRCAETYVSGKYRELPSKKCWLLPRPDLELQRGCALPPCPLRVATGPPRGSWSASPWSQCTASCGGGVKRRTVQCLSGGRPASGCSPSRRPDSSLACNTHFCPVAEEKDAACGDHFPWCYLVPQHRMCSHGFYSQQCCETCAESNL
SIO_010081: Adamts16
subclass of: SO_0000673
so part of: Adamts16
location: join(2558780..2558863,2558978..2559110,2564325..2564650,2588519..2588795,2592009..2592208,2593697..2593780,2595900..2596059,2597786..2597891,2603499..2603636,2611013..2611166,2619815..2619910,2622794..2622942,2623640..2623812,2625813..2625943,2627648..2627771,2627982..2628226,2629155..2629293,2632819..2632945,2652503..2652704,2652828..2653022,2654309..2654524,2657265..2657412,2659249..2659364)
location: region:2558780-2659364:1
so has part: feature:2558780-2558863:1:exon
so has part: feature:2558978-2559110:1:exon
so has part: feature:2564325-2564650:1:exon
so has part: feature:2588519-2588795:1:exon
so has part: feature:2592009-2592208:1:exon
so has part: feature:2593697-2593780:1:exon
so has part: feature:2595900-2596059:1:exon
so has part: feature:2597786-2597891:1:exon
so has part: feature:2603499-2603636:1:exon
so has part: feature:2611013-2611166:1:exon
so has part: feature:2619815-2619910:1:exon
so has part: feature:2622794-2622942:1:exon
so has part: feature:2623640-2623812:1:exon
so has part: feature:2625813-2625943:1:exon
so has part: feature:2627648-2627771:1:exon
so has part: feature:2627982-2628226:1:exon
so has part: feature:2629155-2629293:1:exon
so has part: feature:2632819-2632945:1:exon
so has part: feature:2652503-2652704:1:exon
so has part: feature:2652828-2653022:1:exon
so has part: feature:2654309-2654524:1:exon
so has part: feature:2657265-2657412:1:exon
so has part: feature:2659249-2659364:1:exon

XP_048223992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2558780-2558863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2558978-2559110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2564325-2564650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2588519-2588795:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2592009-2592208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2593697-2593780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2595900-2596059:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2597786-2597891:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2603499-2603636:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2611013-2611166:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2619815-2619910:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2622794-2622942:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2623640-2623812:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2625813-2625943:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2627648-2627771:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2627982-2628226:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2629155-2629293:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2632819-2632945:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2652503-2652704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2652828-2653022:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2654309-2654524:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2657265-2657412:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2659249-2659364:1:exon

Ice1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ice1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2711549..2756852
location: region:2711549-2756852:1
so has part: feature:2711549-2756852:1:exon
subclass of: SO_0000010

125367663
type: Gene
SIO_000068: ncbigene

position:2711549:1
position: 2711549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2756852:1
position: 2756852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2711549-2756852:1:exon

Ice1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ice1
product: interactor of little elongation complex ELL subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048368343.1
SIO_010081: Ice1
subclass of: SO_0000673
so part of: Ice1
location: join(2711549..2711821,2721799..2721857,2722850..2722884,2725108..2725126,2726204..2726315,2728250..2728326,2729652..2729689,2732275..2732357,2732550..2732589,2732672..2732728,2737622..2737708,2740770..2741185,2742338..2743044,2743081..2744441,2744604..2748037,2749239..2749407,2751436..2751596,2753558..2753748,2755540..2755646,2756124..2756222,2756471..2756852)
location: region:2711549-2756852:1
so has part: feature:2711549-2711821:1:exon
so has part: feature:2721799-2721857:1:exon
so has part: feature:2722850-2722884:1:exon
so has part: feature:2725108-2725126:1:exon
so has part: feature:2726204-2726315:1:exon
so has part: feature:2728250-2728326:1:exon
so has part: feature:2729652-2729689:1:exon
so has part: feature:2732275-2732357:1:exon
so has part: feature:2732550-2732589:1:exon
so has part: feature:2732672-2732728:1:exon
so has part: feature:2737622-2737708:1:exon
so has part: feature:2740770-2741185:1:exon
so has part: feature:2742338-2743044:1:exon
so has part: feature:2743081-2744441:1:exon
so has part: feature:2744604-2748037:1:exon
so has part: feature:2749239-2749407:1:exon
so has part: feature:2751436-2751596:1:exon
so has part: feature:2753558-2753748:1:exon
so has part: feature:2755540-2755646:1:exon
so has part: feature:2756124-2756222:1:exon
so has part: feature:2756471-2756852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2711549-2711821:1:exon

position:2711821:1
position: 2711821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2721799-2721857:1:exon

position:2721799:1
position: 2721799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2721857:1
position: 2721857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2722850-2722884:1:exon

position:2722850:1
position: 2722850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2722884:1
position: 2722884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2725108-2725126:1:exon

position:2725108:1
position: 2725108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2725126:1
position: 2725126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2726204-2726315:1:exon

position:2726204:1
position: 2726204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2726315:1
position: 2726315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2728250-2728326:1:exon

position:2728250:1
position: 2728250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2728326:1
position: 2728326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2729652-2729689:1:exon

position:2729652:1
position: 2729652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2729689:1
position: 2729689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2732275-2732357:1:exon

position:2732275:1
position: 2732275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2732357:1
position: 2732357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2732550-2732589:1:exon

position:2732550:1
position: 2732550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2732589:1
position: 2732589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2732672-2732728:1:exon

position:2732672:1
position: 2732672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2732728:1
position: 2732728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2737622-2737708:1:exon

position:2737622:1
position: 2737622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2737708:1
position: 2737708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2740770-2741185:1:exon

position:2740770:1
position: 2740770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2741185:1
position: 2741185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2742338-2743044:1:exon

position:2742338:1
position: 2742338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2743044:1
position: 2743044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2743081-2744441:1:exon

position:2743081:1
position: 2743081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2744441:1
position: 2744441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2744604-2748037:1:exon

position:2744604:1
position: 2744604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2748037:1
position: 2748037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2749239-2749407:1:exon

position:2749239:1
position: 2749239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2749407:1
position: 2749407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2751436-2751596:1:exon

position:2751436:1
position: 2751436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2751596:1
position: 2751596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2753558-2753748:1:exon

position:2753558:1
position: 2753558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2753748:1
position: 2753748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2755540-2755646:1:exon

position:2755540:1
position: 2755540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2755646:1
position: 2755646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2756124-2756222:1:exon

position:2756124:1
position: 2756124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2756222:1
position: 2756222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2756471-2756852:1:exon

position:2756471:1
position: 2756471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ice1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ice1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: little elongation complex subunit 1
translation: MMPGETHSAATGAAADLVQCQGCASLQQNLNEYVEALITLKQKIINTDNLLTEYQKKCDELQFARRENSTLHHQVEQMLQKISPLQKCQEELGTLKAELEEKKSSLKLYQASHQEYTRVKEECLKSDAQKKKLEAKVKKLEEAAVKQTQDFKQLRNEKKILEKEFKKTQERLDEFSKQKNKKGLRHIGTQISSDSYGSIDKRKVKLLLKELWLCVNTAQRLPGDVGRRTPEKFAQDDSSFSTSREDGTPSPSRDSPPRAAEVPTCLAELSMEVEESSTSCAGVQQERPFGATPSPHPVSSEGRSPEVLMQGPGDADRADSPGPVPMVDEDLQAAIDFFRLPLPLVSPVPSPPLTSSPNHRRPLPSLLAPETYFGEYTDSSDNDLATHGDSDASEDDIADAQACFGLSRKNNGHGAKSKEAAQVLSKFAVRGVKASAAPLGEPSTAAGAAPRDLTGGRGSRAAEAERRAEAGPRSAPAPAERVAERVLPGPSRSLSVEKLSGGPPRGGEPAAASSGLYFMPLVKRPLKELLGSDEEASSSSKKLGSPLSGLPRCAFAGDMPSTSDFGSFPRTPREPAKDQEDEQESTSESSDSEDDDPGDGMGPGGPSSSFSHPQPSRLQYMNDAGRPARAEPPEQPRVQGRFRARNMLPAPSEPPEPSVQGSSLGSRLCPPSPGPETPTQASTLALSVLRRMTEDGQSERQDSRPASPSSTSSQSCLSETDSGFDKSTSWHQGDSVRRGGEESPSVTSEQAVPASQNRGSSAMRELPGEHASPASLLLSPVSLTTQPASPKQSHSVSVESGQRENSPVSLTTQPASPKQSHSVSVESGQRENSPVSLTTQPASPKQSQSVSVDSGQHENTPLSLTTQPASPKQGQSVSVDSGQRENTPLSLTTQPASPKQSQSVSVDSGQHENTPLSLTTQPASPKQGQSDSVDSGQRENSPVSLTTQPASPKQSQSVSVDSGQCENSPLSFTTQPASPKQSQSVSVDSGQCENSPLSFTTQPASPKQGQSDSMDWGPHENNPVSVTTQPASPKQGQGVSVDSGQRENSSVSVTTQPASPQQGQSISVDSGQHVNSPVSLTTQLASPKQGHSDSMDWGQRENSPVSVTTQPASPKQGQGDSVDWGQRENSPVSVTIQPASPKLGQGDSVDWGLHEKVSTSALENCNSVTDDASVAEHANDRAETAGNIAEGPVKRSASPEFSVSYSKLDLGSQGDSLSAENFDCSTSRKLSSPEDSLCQSQGSSKGAAVHGEGPGEAAQPPRAPPATGPDSSAMESPELPPAEPALSEETPCGHASGPSSDTSAMASGSAATQQSASELSPSTSPAPRASPPPFLTAGTALGSAPSSPEEKTQASPSGGPPGTPSCRPRVAAGGEEDTGTEASEPSSCSEGEPEAGHARRASGEEGGAAAQGRPSPDVGYLTLALQDFNINTFPDIDRLSTSEVAMFLESCQLKDCSSGDSVSECSSKGTLNKEMSKDLEPSGASGEKCEQQLCEEATVGASEEWAEPEEEDGSSEDPRQLVQCSLETLSDVLAKTGPELEANCGDSGAGDIGTLPLLSANGSAATEGLKESSPPEGASSLAPHSPEPPLLVPEARVEDSPPGSGGCHSEHARGRLTAGPAAAVCADIGRNGRAGPADSSAPTSDSATESRMEQSSGDESEAFQSHLSAATSEVTDTHAEKDQSLGVEREDSWVVGGAAASPDVGTPRALEEGEDDSLSPTSTENSPETSPAAPPFQEPPSGSAPTGPQGGVSSNGPGANFDKSRLRNRPVKPSIWISSQIYDQTFEAQNVASDHTYCNSRPEPFCKNKTRSKISHKDQSNKPVKTSVSKGDVHPGDPPQPLPGEGSPKSQKGQPQPVLAHADTSMSTDGSLDTLSKIRQEVGPPLPPLLAPLIATPPRAAPPLSPLASSPSSPASPPGKMSPASEIPVPPVLSPWPEDPPSSSPLEPSPSPSSAAGGRILSSPLQFCAATPKHALPVPGRLPPCAPGPAAVGGPPENSV…
SIO_010081: Ice1
subclass of: SO_0000673
so part of: Ice1
location: join(2711738..2711821,2721799..2721857,2722850..2722884,2725108..2725126,2726204..2726315,2728250..2728326,2729652..2729689,2732275..2732357,2732550..2732589,2732672..2732728,2737622..2737708,2740770..2741185,2742338..2743044,2743081..2744441,2744604..2748037,2749239..2749407,2751436..2751596,2753558..2753748,2755540..2755646,2756124..2756222,2756471..2756667)
location: region:2711738-2756667:1
so has part: feature:2711738-2711821:1:exon
so has part: feature:2721799-2721857:1:exon
so has part: feature:2722850-2722884:1:exon
so has part: feature:2725108-2725126:1:exon
so has part: feature:2726204-2726315:1:exon
so has part: feature:2728250-2728326:1:exon
so has part: feature:2729652-2729689:1:exon
so has part: feature:2732275-2732357:1:exon
so has part: feature:2732550-2732589:1:exon
so has part: feature:2732672-2732728:1:exon
so has part: feature:2737622-2737708:1:exon
so has part: feature:2740770-2741185:1:exon
so has part: feature:2742338-2743044:1:exon
so has part: feature:2743081-2744441:1:exon
so has part: feature:2744604-2748037:1:exon
so has part: feature:2749239-2749407:1:exon
so has part: feature:2751436-2751596:1:exon
so has part: feature:2753558-2753748:1:exon
so has part: feature:2755540-2755646:1:exon
so has part: feature:2756124-2756222:1:exon
so has part: feature:2756471-2756667:1:exon

XP_048224300.1
type: Protein
SIO_000068: ncbiprotein

position:2711738:1
position: 2711738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2756667:1
position: 2756667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2711738-2711821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2721799-2721857:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2722850-2722884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2725108-2725126:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2726204-2726315:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2728250-2728326:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2729652-2729689:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2732275-2732357:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2732550-2732589:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2732672-2732728:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2737622-2737708:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2740770-2741185:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2742338-2743044:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2743081-2744441:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2744604-2748037:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2749239-2749407:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2751436-2751596:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2753558-2753748:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2755540-2755646:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2756124-2756222:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2756471-2756667:1:exon

LOC125367540
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3144295..3147667)
location: region:3144295-3147667:-1
so has part: feature:3144295-3147667:-1:exon
subclass of: SO_0000010

125367540
type: Gene
SIO_000068: ncbigene

position:3144295:-1
position: 3144295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3147667:-1
position: 3147667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3144295-3147667:-1:exon

LOC125367540
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125367540
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048368229.1
SIO_010081: LOC125367540
subclass of: SO_0000673
so part of: LOC125367540
location: complement(join(3144295..3144324,3144602..3146575,3146731..3146877,3147656..3147667))
location: region:3144295-3147667:-1
so has part: feature:3147656-3147667:-1:exon
so has part: feature:3146731-3146877:-1:exon
so has part: feature:3144602-3146575:-1:exon
so has part: feature:3144295-3144324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3147656-3147667:-1:exon

position:3147656:-1
position: 3147656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3146731-3146877:-1:exon

position:3146731:-1
position: 3146731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3146877:-1
position: 3146877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3144602-3146575:-1:exon

position:3144602:-1
position: 3144602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3146575:-1
position: 3146575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3144295-3144324:-1:exon

position:3144324:-1
position: 3144324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125367540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125367540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MELKETLSHVGVLCSAQLAEVATVSLVHMYRLFQGPVRNNGYLFVDANVSRHQKSDEKAELCVREPRRRRETVNTTSELRSKPLSRPAGHGDAPEGRGREDSPQRGRRRAGAPRRAGGERRGPPPTAATTHKRHHPRLPPPTAATTHECHHPRLPPPTAATTHGCHHPRVPPPTAATTHKRHHPRLPPPTAATTHECHLPRAPPPTAATTHERHLPRLPPPTSATTHERHHPRLPPPTSATSHGCHLPRAPPPTSATTHGCHHPRAPPPTSATTHGCHHPRVPPPTSATTHERHHPRVPPPTAATTHECHHPRLPPPTSATTHERHHPRLPHPTSDTSHGCHHPRLPPPTSATTHERHHPRLPPPTAATTHERHHPRLPPPTSATTHGCHHPRLPPPTSATTHGCHHPRVPPPTAATTHERHHPRLPPPTAATTHGCHHPRAPPPTAATSHERHHPRAPPPTSATTHERHHPRVTPPTAATTHGCHHPRAPPPTAATTHERHHPRAPPPTAATSHERHHPRAPPPTSATTHGCHHPRVPPPTSATTHERHHPRVPPPTSATTHGCHHPRAPPPTAATTHGCHHPRAPPPTSATSHERHHPRAPPPTSATSHGCHHPRAPPPTAATSHGCHHPRAPPPTAATTHGCHHPRLPPPTSATTHGCHHPRLPPPTAATTHGCHHPRAPPPTAATTHERHHPRLPPPTAATREPLCLGDGIYVLSL
SIO_010081: LOC125367540
subclass of: SO_0000673
so part of: LOC125367540
location: complement(join(3144295..3144324,3144602..3146575,3146731..3146877,3147656..3147667))
location: region:3144295-3147667:-1
so has part: feature:3147656-3147667:-1:exon
so has part: feature:3146731-3146877:-1:exon
so has part: feature:3144602-3146575:-1:exon
so has part: feature:3144295-3144324:-1:exon

XP_048224186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3147656-3147667:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3146731-3146877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144602-3146575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3144295-3144324:-1:exon

Med10
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Med10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3154855..3159826)
location: region:3154855-3159826:-1
so has part: feature:3154855-3159826:-1:exon
subclass of: SO_0000010

125367672
type: Gene
SIO_000068: ncbigene

position:3154855:-1
position: 3154855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3159826:-1
position: 3159826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3154855-3159826:-1:exon

Med10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Med10
product: mediator complex subunit 10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368355.1
SIO_010081: Med10
subclass of: SO_0000673
so part of: Med10
location: complement(join(3154855..3155360,3156225..3156327,3159008..3159091,3159636..3159826))
location: region:3154855-3159826:-1
so has part: feature:3159636-3159826:-1:exon
so has part: feature:3159008-3159091:-1:exon
so has part: feature:3156225-3156327:-1:exon
so has part: feature:3154855-3155360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3159636-3159826:-1:exon

position:3159636:-1
position: 3159636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3159008-3159091:-1:exon

position:3159008:-1
position: 3159008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3159091:-1
position: 3159091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3156225-3156327:-1:exon

position:3156225:-1
position: 3156225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3156327:-1
position: 3156327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3154855-3155360:-1:exon

position:3155360:-1
position: 3155360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Med10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Med10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 10
translation: MAEKFDHLEEHLEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKHEQVKGKIDTMKKFKTLLIQELSKVFPEDMAKYRSIRGEDHPPS
SIO_010081: Med10
subclass of: SO_0000673
so part of: Med10
location: complement(join(3155262..3155360,3156225..3156327,3159008..3159091,3159636..3159757))
location: region:3155262-3159757:-1
so has part: feature:3159636-3159757:-1:exon
so has part: feature:3159008-3159091:-1:exon
so has part: feature:3156225-3156327:-1:exon
so has part: feature:3155262-3155360:-1:exon

XP_048224312.1
type: Protein
SIO_000068: ncbiprotein

position:3155262:-1
position: 3155262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3159757:-1
position: 3159757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3159636-3159757:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3159008-3159091:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3156225-3156327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3155262-3155360:-1:exon

Ube2ql1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ube2ql1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3204608..3232504
location: region:3204608-3232504:1
so has part: feature:3204608-3232504:1:exon
subclass of: SO_0000010

125367669
type: Gene
SIO_000068: ncbigene

position:3204608:1
position: 3204608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3232504:1
position: 3232504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3204608-3232504:1:exon

Ube2ql1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ube2ql1
product: ubiquitin conjugating enzyme E2 Q family like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048368351.1
SIO_010081: Ube2ql1
subclass of: SO_0000673
so part of: Ube2ql1
location: join(3204608..3205400,3231744..3232504)
location: region:3204608-3232504:1
so has part: feature:3204608-3205400:1:exon
so has part: feature:3231744-3232504:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3204608-3205400:1:exon

position:3205400:1
position: 3205400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3231744-3232504:1:exon

position:3231744:1
position: 3231744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ube2ql1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ube2ql1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2Q-like protein 1
translation: MATLLRKIGLIRLHRDTGDPKHHRGGGGSGGQQSASLRGKGGAKSGGHKPPPPPQQPGGAGDASPGPGQGRRAAEPAPRDKAAAPAVGAAGAAGAGGPRERAAGARAGPGPAGAAGAAAGGCPVPAGRQQHCTQVRSRRLMKELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVKGQGRICRKAGKSKKSFSRKEAEATFKSLVKTHEKYGWVTPPVSDG
SIO_010081: Ube2ql1
subclass of: SO_0000673
so part of: Ube2ql1
location: join(3204627..3205400,3231744..3231875)
location: region:3204627-3231875:1
so has part: feature:3204627-3205400:1:exon
so has part: feature:3231744-3231875:1:exon

XP_048224308.1
type: Protein
SIO_000068: ncbiprotein

position:3204627:1
position: 3204627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3231875:1
position: 3231875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3204627-3205400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3231744-3231875:1:exon

Nsun2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Nsun2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3258337..3282864)
location: region:3258337-3282864:-1
so has part: feature:3258337-3282864:-1:exon
subclass of: SO_0000010

125367664
type: Gene
SIO_000068: ncbigene

position:3258337:-1
position: 3258337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3282864:-1
position: 3282864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3258337-3282864:-1:exon

Nsun2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Nsun2
product: NOP2/Sun RNA methyltransferase 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368344.1
SIO_010081: Nsun2
subclass of: SO_0000673
so part of: Nsun2
location: complement(join(3258337..3259106,3260708..3260747,3262487..3262625,3262875..3262955,3263495..3263630,3264163..3264255,3264482..3264663,3267460..3267556,3267863..3267993,3268479..3268552,3271038..3271168,3272392..3272466,3274495..3274687,3275814..3275898,3276541..3276612,3277337..3277442,3281797..3281901,3282487..3282644,3282739..3282864))
location: region:3258337-3282864:-1
so has part: feature:3282739-3282864:-1:exon
so has part: feature:3282487-3282644:-1:exon
so has part: feature:3281797-3281901:-1:exon
so has part: feature:3277337-3277442:-1:exon
so has part: feature:3276541-3276612:-1:exon
so has part: feature:3275814-3275898:-1:exon
so has part: feature:3274495-3274687:-1:exon
so has part: feature:3272392-3272466:-1:exon
so has part: feature:3271038-3271168:-1:exon
so has part: feature:3268479-3268552:-1:exon
so has part: feature:3267863-3267993:-1:exon
so has part: feature:3267460-3267556:-1:exon
so has part: feature:3264482-3264663:-1:exon
so has part: feature:3264163-3264255:-1:exon
so has part: feature:3263495-3263630:-1:exon
so has part: feature:3262875-3262955:-1:exon
so has part: feature:3262487-3262625:-1:exon
so has part: feature:3260708-3260747:-1:exon
so has part: feature:3258337-3259106:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3282739-3282864:-1:exon

position:3282739:-1
position: 3282739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3282487-3282644:-1:exon

position:3282487:-1
position: 3282487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3282644:-1
position: 3282644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3281797-3281901:-1:exon

position:3281797:-1
position: 3281797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3281901:-1
position: 3281901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3277337-3277442:-1:exon

position:3277337:-1
position: 3277337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3277442:-1
position: 3277442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3276541-3276612:-1:exon

position:3276541:-1
position: 3276541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3276612:-1
position: 3276612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3275814-3275898:-1:exon

position:3275814:-1
position: 3275814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3275898:-1
position: 3275898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3274495-3274687:-1:exon

position:3274495:-1
position: 3274495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3274687:-1
position: 3274687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3272392-3272466:-1:exon

position:3272392:-1
position: 3272392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3272466:-1
position: 3272466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3271038-3271168:-1:exon

position:3271038:-1
position: 3271038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3271168:-1
position: 3271168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3268479-3268552:-1:exon

position:3268479:-1
position: 3268479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3268552:-1
position: 3268552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3267863-3267993:-1:exon

position:3267863:-1
position: 3267863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3267993:-1
position: 3267993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3267460-3267556:-1:exon

position:3267460:-1
position: 3267460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3267556:-1
position: 3267556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3264482-3264663:-1:exon

position:3264482:-1
position: 3264482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3264663:-1
position: 3264663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3264163-3264255:-1:exon

position:3264163:-1
position: 3264163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3264255:-1
position: 3264255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3263495-3263630:-1:exon

position:3263495:-1
position: 3263495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3263630:-1
position: 3263630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3262875-3262955:-1:exon

position:3262875:-1
position: 3262875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3262955:-1
position: 3262955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3262487-3262625:-1:exon

position:3262487:-1
position: 3262487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3262625:-1
position: 3262625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3260708-3260747:-1:exon

position:3260708:-1
position: 3260708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3260747:-1
position: 3260747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3258337-3259106:-1:exon

position:3259106:-1
position: 3259106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Nsun2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Nsun2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA cytosine C(5)-methyltransferase NSUN2
translation: MGRRARARRQAPPRRGPGDAEDGGAEGGGKRGDAGWEGGYPEIVKENPLFERYYRELGIVPDGEWEQFMAALREPLPATLRITGYKSHAKEILHCLKNKYFKELEDLEVDGQKVEVPQPLSWYPEELAWHTNLSRKILRKSPQLEKFHQFLVSETESGNISRQEAVSMIPPLLLDVRPHHKILDMCAAPGSKTTQLIEMLHADMSVPFPEGFVIANDVDNKRCYLLVHQAKRLSSPCIMVVNHDASSIPRLTVDTDGRREILFYDRILCDVPCSGDGTMRKNIDVWKKWSPLNSLQLHGLQLRIATRGAEQLAEGGRMVYSTCSLNPVEDEAVIASLLEKSEGALELADVSGELPGLKWMPGVTQWKVMTRDGQWFADWDEVPHSRHTQIRPTMFPPKDPEKLQAMHLERCLRILPHHQNTGGFFVAVLVKKASMPWNKRQPKVQGRSAETRETSQSSPVTPTEESLTDPCELQDQAVAGSGDTETTGTAVSSENENKKDGVCGPPPSKKMKLFGFKEDPFVFIPEDDPLFPPIEKFYALDPSFPRMNLLTRTTEGKKRQLYMVSKELRNVLLNNSEKMKVINTGIKVWCRNNSGEEFDCAFRLAQEGIYTLYPFINSRIINISMEDVKILLTQENPFFRKLSSETYSQAKDLAKGSVVLKYEPDSARPGALQCPIVLCGWRGKASIRTFVPKNERLHYLRMMGLEVLGEKKKEGLILTSENAADPQQPEDREGAEAEADAPDATPGCDPAAAEPPR
SIO_010081: Nsun2
subclass of: SO_0000673
so part of: Nsun2
location: complement(join(3258833..3259106,3260708..3260747,3262487..3262625,3262875..3262955,3263495..3263630,3264163..3264255,3264482..3264663,3267460..3267556,3267863..3267993,3268479..3268552,3271038..3271168,3272392..3272466,3274495..3274687,3275814..3275898,3276541..3276612,3277337..3277442,3281797..3281901,3282487..3282644,3282739..3282840))
location: region:3258833-3282840:-1
so has part: feature:3282739-3282840:-1:exon
so has part: feature:3282487-3282644:-1:exon
so has part: feature:3281797-3281901:-1:exon
so has part: feature:3277337-3277442:-1:exon
so has part: feature:3276541-3276612:-1:exon
so has part: feature:3275814-3275898:-1:exon
so has part: feature:3274495-3274687:-1:exon
so has part: feature:3272392-3272466:-1:exon
so has part: feature:3271038-3271168:-1:exon
so has part: feature:3268479-3268552:-1:exon
so has part: feature:3267863-3267993:-1:exon
so has part: feature:3267460-3267556:-1:exon
so has part: feature:3264482-3264663:-1:exon
so has part: feature:3264163-3264255:-1:exon
so has part: feature:3263495-3263630:-1:exon
so has part: feature:3262875-3262955:-1:exon
so has part: feature:3262487-3262625:-1:exon
so has part: feature:3260708-3260747:-1:exon
so has part: feature:3258833-3259106:-1:exon

XP_048224301.1
type: Protein
SIO_000068: ncbiprotein

position:3258833:-1
position: 3258833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3282840:-1
position: 3282840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3282739-3282840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3282487-3282644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3281797-3281901:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3277337-3277442:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3276541-3276612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3275814-3275898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3274495-3274687:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3272392-3272466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3271038-3271168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3268479-3268552:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3267863-3267993:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3267460-3267556:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3264482-3264663:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3264163-3264255:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3263495-3263630:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3262875-3262955:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3262487-3262625:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3260708-3260747:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3258833-3259106:-1:exon

Srd5a1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Srd5a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3283366..3306843
location: region:3283366-3306843:1
so has part: feature:3283366-3306843:1:exon
subclass of: SO_0000010

125367670
type: Gene
SIO_000068: ncbigene

position:3283366:1
position: 3283366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3306843:1
position: 3306843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3283366-3306843:1:exon

Srd5a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Srd5a1
product: steroid 5 alpha-reductase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048368352.1
SIO_010081: Srd5a1
subclass of: SO_0000673
so part of: Srd5a1
location: join(3283366..3283738,3297982..3298148,3298872..3298973,3301347..3301497,3306768..3306843)
location: region:3283366-3306843:1
so has part: feature:3283366-3283738:1:exon
so has part: feature:3297982-3298148:1:exon
so has part: feature:3298872-3298973:1:exon
so has part: feature:3301347-3301497:1:exon
so has part: feature:3306768-3306843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3283366-3283738:1:exon

position:3283738:1
position: 3283738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3297982-3298148:1:exon

position:3297982:1
position: 3297982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3298148:1
position: 3298148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3298872-3298973:1:exon

position:3298872:1
position: 3298872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3298973:1
position: 3298973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3301347-3301497:1:exon

position:3301347:1
position: 3301347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3301497:1
position: 3301497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3306768-3306843:1:exon

position:3306768:1
position: 3306768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Srd5a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Srd5a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 3-oxo-5-alpha-steroid 4-dehydrogenase 1
translation: MELAEPHLLDALAYLEGFFGLLGFVTLQWLGSPYGRYSPQWSGPRVPARAAWLLQELPSLAWPLYECARARALRLRSWPNRILLAMFVVHYLQRTLIFPLLIRGGKPTLLFSYVLAFIFCTYNGYLQSRYLSQYAVYPEPWVTCPLFLAGFVLWLSGMVINIHSDHILRNLRKPGETGYKIPRGGLFEYVTGANYFGEVVEWGGFALASWSLQGGVFAFFTFCILITRAKQHHQWYLEKFEDYPKSRKIMIPFLY
SIO_010081: Srd5a1
subclass of: SO_0000673
so part of: Srd5a1
location: join(3283458..3283738,3297982..3298148,3298872..3298973,3301347..3301497,3306768..3306834)
location: region:3283458-3306834:1
so has part: feature:3283458-3283738:1:exon
so has part: feature:3297982-3298148:1:exon
so has part: feature:3298872-3298973:1:exon
so has part: feature:3301347-3301497:1:exon
so has part: feature:3306768-3306834:1:exon

XP_048224309.1
type: Protein
SIO_000068: ncbiprotein

position:3283458:1
position: 3283458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3306834:1
position: 3306834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3283458-3283738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3297982-3298148:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3298872-3298973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3301347-3301497:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3306768-3306834:1:exon

Tent4a
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tent4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3340742..3377523
location: region:3340742-3377523:1
so has part: feature:3340742-3377523:1:exon
subclass of: SO_0000010

125367611
type: Gene
SIO_000068: ncbigene

position:3340742:1
position: 3340742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3377523:1
position: 3377523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3340742-3377523:1:exon

Tent4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tent4a
product: terminal nucleotidyltransferase 4A
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
transcript id: XM_048368288.1
SIO_010081: Tent4a
subclass of: SO_0000673
so part of: Tent4a
location: join(3340742..3341568,3359496..3359619,3360788..3360834,3361939..3362059,3364367..3364474,3365284..3365412,3367458..3367671,3369550..3369676,3370543..3370643,3371409..3371581,3372000..3372158,3373801..3373965,3375437..3377523)
location: region:3340742-3377523:1
so has part: feature:3340742-3341568:1:exon
so has part: feature:3359496-3359619:1:exon
so has part: feature:3360788-3360834:1:exon
so has part: feature:3361939-3362059:1:exon
so has part: feature:3364367-3364474:1:exon
so has part: feature:3365284-3365412:1:exon
so has part: feature:3367458-3367671:1:exon
so has part: feature:3369550-3369676:1:exon
so has part: feature:3370543-3370643:1:exon
so has part: feature:3371409-3371581:1:exon
so has part: feature:3372000-3372158:1:exon
so has part: feature:3373801-3373965:1:exon
so has part: feature:3375437-3377523:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3340742-3341568:1:exon

position:3341568:1
position: 3341568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3359496-3359619:1:exon

position:3359496:1
position: 3359496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3359619:1
position: 3359619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3360788-3360834:1:exon

position:3360788:1
position: 3360788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3360834:1
position: 3360834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3361939-3362059:1:exon

position:3361939:1
position: 3361939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3362059:1
position: 3362059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3364367-3364474:1:exon

position:3364367:1
position: 3364367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3364474:1
position: 3364474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3365284-3365412:1:exon

position:3365284:1
position: 3365284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3365412:1
position: 3365412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3367458-3367671:1:exon

position:3367458:1
position: 3367458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3367671:1
position: 3367671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3369550-3369676:1:exon

position:3369550:1
position: 3369550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3369676:1
position: 3369676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3370543-3370643:1:exon

position:3370543:1
position: 3370543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3370643:1
position: 3370643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3371409-3371581:1:exon

position:3371409:1
position: 3371409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3371581:1
position: 3371581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3372000-3372158:1:exon

position:3372000:1
position: 3372000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3372158:1
position: 3372158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3373801-3373965:1:exon

position:3373801:1
position: 3373801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3373965:1
position: 3373965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3375437-3377523:1:exon

position:3375437:1
position: 3375437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tent4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tent4a
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: terminal nucleotidyltransferase 4A
translation: MDPRVAWIQPEQKGPANALWMQIWETSQGVGRAGSGFASYFCLNSPALDTGAAGGGGGGGGAGVGPGPAPPAAASPPPPPAPGPAAAAAAPGPAALPPALLTALGPGAAEGARRLHKSPSLSSSSSSSSSSNAESGTESPGCSSSSSSSSSSGGSGGGAASLGXPAGGGGGGFFSFADGAPGTPPGPHAGGPAPAGSPPPPPPPHQFHPGRRKRENKASTYGLNYLLSGSRAATLSGGGGGGGGPGAQAPRPGTPWKSRAYSPGIQGLHEEIIDFYNFMSPCPEEAAMRREVVKRIETVVKDLWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQLLEQALRKHNVAEPCSIKVLDKATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNYMKKYSLLPYLILVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLHPRIDARRADENLGMLLVEFFELYGRNFNYLKTGIRIKEGGAYIAKEEIMKAMTSGYRPSMLCIEDPLLPGNDVGRSSYGAMQVKQVFDYAYIVLSHAVSPLARSYPNRDSESTLGRIIKVTQEVIDYRRWIKEKWGGRVHPAPELDNRIKIKERIAPCNGEQAQNREPGSPYSQRLTLSLSSPQLLSSGSSASSVSSLSGSDIDSDTAPCSTPSVYQFSLQAPTALVATLPTALPMPSSKPQPSTSRTLIMTANNQTRFAIPPPALGVSPVPCRQAGVEGTTSLKAVHHVSSPAIPSASPNPLSSPHVYHKQHNGMKLSMKGSHSHAQGGGYGSVGGGGVRPPVGNRGHHQYNRTGWRRKKHAHTRDSLPVSLSR
SIO_010081: Tent4a
subclass of: SO_0000673
so part of: Tent4a
location: join(3340770..3341568,3359496..3359619,3360788..3360834,3361939..3362059,3364367..3364474,3365284..3365412,3367458..3367671,3369550..3369676,3370543..3370643,3371409..3371581,3372000..3372158,3373801..3373965,3375437..3375631)
location: region:3340770-3375631:1
so has part: feature:3340770-3341568:1:exon
so has part: feature:3359496-3359619:1:exon
so has part: feature:3360788-3360834:1:exon
so has part: feature:3361939-3362059:1:exon
so has part: feature:3364367-3364474:1:exon
so has part: feature:3365284-3365412:1:exon
so has part: feature:3367458-3367671:1:exon
so has part: feature:3369550-3369676:1:exon
so has part: feature:3370543-3370643:1:exon
so has part: feature:3371409-3371581:1:exon
so has part: feature:3372000-3372158:1:exon
so has part: feature:3373801-3373965:1:exon
so has part: feature:3375437-3375631:1:exon

XP_048224245.1
type: Protein
SIO_000068: ncbiprotein

position:3340770:1
position: 3340770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3375631:1
position: 3375631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3340770-3341568:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3359496-3359619:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3360788-3360834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3361939-3362059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3364367-3364474:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3365284-3365412:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3367458-3367671:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3369550-3369676:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3370543-3370643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3371409-3371581:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3372000-3372158:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3373801-3373965:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3375437-3375631:1:exon

Adcy2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Adcy2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3648185..3945743
location: region:3648185-3945743:1
so has part: feature:3648185-3945743:1:exon
subclass of: SO_0000010

125367715
type: Gene
SIO_000068: ncbigene

position:3648185:1
position: 3648185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3945743:1
position: 3945743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3648185-3945743:1:exon

Adcy2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Adcy2
product: adenylate cyclase 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368415.1
SIO_010081: Adcy2
subclass of: SO_0000673
so part of: Adcy2
location: join(3648185..3648394,3663915..3664112,3744477..3744638,3825678..3825827,3866072..3866220,3869300..3869411,3872486..3872613,3876299..3876457,3877319..3877451,3878752..3878928,3880781..3880824,3882214..3882294,3887627..3887696,3889039..3889136,3897432..3897516,3906123..3906260,3910828..3910947,3913950..3914119,3923309..3923393,3927416..3927574,3928648..3928794,3930743..3930850,3941284..3941398,3942855..3942979,3944913..3945743)
location: region:3648185-3945743:1
so has part: feature:3648185-3648394:1:exon
so has part: feature:3663915-3664112:1:exon
so has part: feature:3744477-3744638:1:exon
so has part: feature:3825678-3825827:1:exon
so has part: feature:3866072-3866220:1:exon
so has part: feature:3869300-3869411:1:exon
so has part: feature:3872486-3872613:1:exon
so has part: feature:3876299-3876457:1:exon
so has part: feature:3877319-3877451:1:exon
so has part: feature:3878752-3878928:1:exon
so has part: feature:3880781-3880824:1:exon
so has part: feature:3882214-3882294:1:exon
so has part: feature:3887627-3887696:1:exon
so has part: feature:3889039-3889136:1:exon
so has part: feature:3897432-3897516:1:exon
so has part: feature:3906123-3906260:1:exon
so has part: feature:3910828-3910947:1:exon
so has part: feature:3913950-3914119:1:exon
so has part: feature:3923309-3923393:1:exon
so has part: feature:3927416-3927574:1:exon
so has part: feature:3928648-3928794:1:exon
so has part: feature:3930743-3930850:1:exon
so has part: feature:3941284-3941398:1:exon
so has part: feature:3942855-3942979:1:exon
so has part: feature:3944913-3945743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3648185-3648394:1:exon

position:3648394:1
position: 3648394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3663915-3664112:1:exon

position:3663915:1
position: 3663915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3664112:1
position: 3664112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3744477-3744638:1:exon

position:3744477:1
position: 3744477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3744638:1
position: 3744638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3825678-3825827:1:exon

position:3825678:1
position: 3825678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3825827:1
position: 3825827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3866072-3866220:1:exon

position:3866072:1
position: 3866072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3866220:1
position: 3866220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3869300-3869411:1:exon

position:3869300:1
position: 3869300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3869411:1
position: 3869411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3872486-3872613:1:exon

position:3872486:1
position: 3872486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3872613:1
position: 3872613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3876299-3876457:1:exon

position:3876299:1
position: 3876299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3876457:1
position: 3876457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3877319-3877451:1:exon

position:3877319:1
position: 3877319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3877451:1
position: 3877451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3878752-3878928:1:exon

position:3878752:1
position: 3878752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3878928:1
position: 3878928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3880781-3880824:1:exon

position:3880781:1
position: 3880781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3880824:1
position: 3880824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3882214-3882294:1:exon

position:3882214:1
position: 3882214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3882294:1
position: 3882294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3887627-3887696:1:exon

position:3887627:1
position: 3887627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3887696:1
position: 3887696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3889039-3889136:1:exon

position:3889039:1
position: 3889039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3889136:1
position: 3889136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3897432-3897516:1:exon

position:3897432:1
position: 3897432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3897516:1
position: 3897516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3906123-3906260:1:exon

position:3906123:1
position: 3906123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3906260:1
position: 3906260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3910828-3910947:1:exon

position:3910828:1
position: 3910828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3910947:1
position: 3910947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3913950-3914119:1:exon

position:3913950:1
position: 3913950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3914119:1
position: 3914119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3923309-3923393:1:exon

position:3923309:1
position: 3923309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3923393:1
position: 3923393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3927416-3927574:1:exon

position:3927416:1
position: 3927416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3927574:1
position: 3927574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3928648-3928794:1:exon

position:3928648:1
position: 3928648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3928794:1
position: 3928794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3930743-3930850:1:exon

position:3930743:1
position: 3930743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3930850:1
position: 3930850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3941284-3941398:1:exon

position:3941284:1
position: 3941284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3941398:1
position: 3941398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3942855-3942979:1:exon

position:3942855:1
position: 3942855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3942979:1
position: 3942979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3944913-3945743:1:exon

position:3944913:1
position: 3944913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Adcy2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Adcy2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate cyclase type 2
translation: MWREAMRRRRYLRDGGEAAAGGGEGRRRSRDWLYESYYRMSQQHPLIVFLLLIVMGACLALLAVFFALGLEVEDHVAFLITVPTALAIFFAIFILVCIESVFKKLLRVFSLVIWTCLVAMGYLFMGFGDAVSPWDQVSFFLFIVFVVYTMLPFNMRDAIIASVLTSSSHTIVLSVYLSATPGGTEHLVWQILANVIIFICGNLAGAYHKQLMELALQQTYQDTCNCIKSRIKLEFEKRQQERLLLSLLPAHIAMEMKAEIIQRLQGPKAGQMENTNNFHNLYVKRHTNVSILYADIVGFTRLASDCSPGELVHMLNELFGKFDQIAKENECMRIKILGDCYYCVSGLPISLPNHAKNCVKMGLDMCEAIKKVRDATGVDINMRVGVHSGNVLCGVIGLQKWQYDVWSHDVTLANHMEAGGVPGRVHISSVTLEHLNGAYKVEEGDGDIRDPYLKQHLVKTYFVINPKGERRSPQHLFRPRHTLDGAKMRASVRMTRYLESWGAAKPFAHLHHRDSMTTENGKISTTDVPMGQHNFQNRTLRTKSQKKRFEEELNERMIQAIDGINAQKQWLKSEDIQRISLLFYNKILEKEYRATALPAFKYYVTCACLIFFCIFIVQILVLPKTSVLGISFGAAFLSLAFILFLCFAGQLLQCSKKASTSLMWLLKSSGIIANRPWPRVSLTVITTTIVLTMAVFNMFFLSDSEETIPPTANITNSSFSASSNQAAVLRAQNLFFLPYFIYSCILGLISCSVFLRVNYELKMLIMMLALVGYNTILLHTHAHVLDAYSQVLFERPGIWKDLKTMGSVSLSIFFITLLVLGRQNEYYCRLDFLWKNKFKKEREEIETMENLNRVLLENVLPAHVAEHFLARSLKNEELYHQSYECVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAATGLSAVPSQEHAQEPDRQYMHIGTMVEFAFALVAKLDAINKHSFNDFKLRVGMNHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTLGYTCTCRGIINVKGKGDLKTYFVNTEMSRSLSQSNVAS
SIO_010081: Adcy2
subclass of: SO_0000673
so part of: Adcy2
location: join(3648185..3648394,3663915..3664112,3744477..3744638,3825678..3825827,3866072..3866220,3869300..3869411,3872486..3872613,3876299..3876457,3877319..3877451,3878752..3878928,3880781..3880824,3882214..3882294,3887627..3887696,3889039..3889136,3897432..3897516,3906123..3906260,3910828..3910947,3913950..3914119,3923309..3923393,3927416..3927574,3928648..3928794,3930743..3930850,3941284..3941398,3942855..3942979,3944913..3945065)
location: region:3648185-3945065:1
so has part: feature:3648185-3648394:1:exon
so has part: feature:3663915-3664112:1:exon
so has part: feature:3744477-3744638:1:exon
so has part: feature:3825678-3825827:1:exon
so has part: feature:3866072-3866220:1:exon
so has part: feature:3869300-3869411:1:exon
so has part: feature:3872486-3872613:1:exon
so has part: feature:3876299-3876457:1:exon
so has part: feature:3877319-3877451:1:exon
so has part: feature:3878752-3878928:1:exon
so has part: feature:3880781-3880824:1:exon
so has part: feature:3882214-3882294:1:exon
so has part: feature:3887627-3887696:1:exon
so has part: feature:3889039-3889136:1:exon
so has part: feature:3897432-3897516:1:exon
so has part: feature:3906123-3906260:1:exon
so has part: feature:3910828-3910947:1:exon
so has part: feature:3913950-3914119:1:exon
so has part: feature:3923309-3923393:1:exon
so has part: feature:3927416-3927574:1:exon
so has part: feature:3928648-3928794:1:exon
so has part: feature:3930743-3930850:1:exon
so has part: feature:3941284-3941398:1:exon
so has part: feature:3942855-3942979:1:exon
so has part: feature:3944913-3945065:1:exon

XP_048224372.1
type: Protein
SIO_000068: ncbiprotein

position:3945065:1
position: 3945065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3648185-3648394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3663915-3664112:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3744477-3744638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3825678-3825827:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3866072-3866220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3869300-3869411:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3872486-3872613:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3876299-3876457:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3877319-3877451:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3878752-3878928:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3880781-3880824:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3882214-3882294:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3887627-3887696:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3889039-3889136:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3897432-3897516:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3906123-3906260:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3910828-3910947:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3913950-3914119:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3923309-3923393:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3927416-3927574:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3928648-3928794:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3930743-3930850:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3941284-3941398:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3942855-3942979:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3944913-3945065:1:exon

C19H5orf49
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: C19H5orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3949690..3955707)
location: region:3949690-3955707:-1
so has part: feature:3949690-3955707:-1:exon
subclass of: SO_0000010

125367541
type: Gene
SIO_000068: ncbigene

position:3949690:-1
position: 3949690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3955707:-1
position: 3955707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3949690-3955707:-1:exon

C19H5orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: C19H5orf49
product: chromosome 19 C5orf49 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048368230.1
SIO_010081: C19H5orf49
subclass of: SO_0000673
so part of: C19H5orf49
location: complement(join(3949690..3949869,3950522..3950638,3955510..3955707))
location: region:3949690-3955707:-1
so has part: feature:3955510-3955707:-1:exon
so has part: feature:3950522-3950638:-1:exon
so has part: feature:3949690-3949869:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3955510-3955707:-1:exon

position:3955510:-1
position: 3955510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3950522-3950638:-1:exon

position:3950522:-1
position: 3950522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3950638:-1
position: 3950638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3949690-3949869:-1:exon

position:3949869:-1
position: 3949869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C19H5orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: C19H5orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C5orf49 homolog
translation: MAAAAGGEVAWADWVDEVEDEEEEITAATLRGKPRQLPTSAQATMGFVPLRRLGPKEHSYFNRPAKTGIVSLYDCFYKQSLDYNQKLHRDDREHAKGMGLHISEEEQERTVGVLSSSVYGRRIDKPVEPLNRDHGRVNHVQNDFYRKNDITSIKEPGFGDIAPA
SIO_010081: C19H5orf49
subclass of: SO_0000673
so part of: C19H5orf49
location: complement(join(3949690..3949869,3950522..3950638,3955510..3955707))
location: region:3949690-3955707:-1
so has part: feature:3955510-3955707:-1:exon
so has part: feature:3950522-3950638:-1:exon
so has part: feature:3949690-3949869:-1:exon

XP_048224187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3955510-3955707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3950522-3950638:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3949690-3949869:-1:exon

Fastkd3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Fastkd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3961950..3969759)
location: region:3961950-3969759:-1
so has part: feature:3961950-3969759:-1:exon
subclass of: SO_0000010

125367727
type: Gene
SIO_000068: ncbigene

position:3961950:-1
position: 3961950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3969759:-1
position: 3969759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3961950-3969759:-1:exon

Fastkd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Fastkd3
product: FAST kinase domains 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
transcript id: XM_048368421.1
SIO_010081: Fastkd3
subclass of: SO_0000673
so part of: Fastkd3
location: complement(join(3961950..3962236,3962666..3962802,3963634..3963748,3964044..3964113,3965082..3965256,3966769..3966854,3967518..3969014,3969714..3969759))
location: region:3961950-3969759:-1
so has part: feature:3969714-3969759:-1:exon
so has part: feature:3967518-3969014:-1:exon
so has part: feature:3966769-3966854:-1:exon
so has part: feature:3965082-3965256:-1:exon
so has part: feature:3964044-3964113:-1:exon
so has part: feature:3963634-3963748:-1:exon
so has part: feature:3962666-3962802:-1:exon
so has part: feature:3961950-3962236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3969714-3969759:-1:exon

position:3969714:-1
position: 3969714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3967518-3969014:-1:exon

position:3967518:-1
position: 3967518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3969014:-1
position: 3969014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3966769-3966854:-1:exon

position:3966769:-1
position: 3966769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3966854:-1
position: 3966854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3965082-3965256:-1:exon

position:3965082:-1
position: 3965082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3965256:-1
position: 3965256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3964044-3964113:-1:exon

position:3964044:-1
position: 3964044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3964113:-1
position: 3964113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3963634-3963748:-1:exon

position:3963634:-1
position: 3963634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3963748:-1
position: 3963748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3962666-3962802:-1:exon

position:3962666:-1
position: 3962666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3962802:-1
position: 3962802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3961950-3962236:-1:exon

position:3962236:-1
position: 3962236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Fastkd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Fastkd3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: FAST kinase domain-containing protein 3, mitochondrial
translation: MALIALRGSFPPLSAVRSSGALAAAAAAAAAAAAAARNQPANPAHGGLAESRPPWFCSLQPGPRRLRFHHAIXREFHSESGKDPHLAGQPPPPAPVRPWDALKQTLQRENEKALSRRLHRCASSEDVLSFISTLETLPDTLAAAALQQICEVENRQRDGSLPRAVLEHSAFRALCLRFERAPSELSNAALVTALRALILLDTDPRGHLIINLVAECHNRLRRGGLGRHHLCILGESLIRLPGVAWEVLEQVLCQLQGEKLETFTPEDTVAIYRILQACPDKTDQHQTFLNAINTFALSVVYYLSPRSISQILTALVVLDQMQAIPLVIKLGKSVVRYIPYFTNEELRNVLEAFIYFGHYDRFFMKALEQHVASLCLTLDSAVTSKVMEYCSKKLILSKPIFNAVAETFVCQPDKFSPTQIVELIEPFGKLNYLPPNATALFTKLENVLFTHFNSFPPKTLLRLLHSCSLIECHPVNFMARLFSPVFLQRLQGDQLYLDRLSLAQLTQLSMTSILECPFYKGPKLLPKFQVKSFLTPCCSLETPVHTPLYKSVMMGLIDLLGSRLYFASKVLTPYCYTIDVEIKLDEDGFALPFTAEEDVHKRVALCVDGPQRFCSNSTHLLGKEAIKQRHLRLLGYQVVQVPCHDMEALTSRLEVVEYLQRKIFSQNSALQW
SIO_010081: Fastkd3
subclass of: SO_0000673
so part of: Fastkd3
location: complement(join(3962704..3962802,3963634..3963748,3964044..3964113,3965082..3965256,3966769..3966854,3967518..3968990))
location: region:3962704-3968990:-1
so has part: feature:3967518-3968990:-1:exon
so has part: feature:3966769-3966854:-1:exon
so has part: feature:3965082-3965256:-1:exon
so has part: feature:3964044-3964113:-1:exon
so has part: feature:3963634-3963748:-1:exon
so has part: feature:3962704-3962802:-1:exon

XP_048224378.1
type: Protein
SIO_000068: ncbiprotein

position:3962704:-1
position: 3962704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3968990:-1
position: 3968990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3967518-3968990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3966769-3966854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3965082-3965256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3964044-3964113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3963634-3963748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3962704-3962802:-1:exon

Mtrr
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Mtrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3969972..3991529
location: region:3969972-3991529:1
so has part: feature:3969972-3991529:1:exon
subclass of: SO_0000010

125367698
type: Gene
SIO_000068: ncbigene

position:3969972:1
position: 3969972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3991529:1
position: 3991529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3969972-3991529:1:exon

Mtrr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Mtrr
product: 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048368402.1
SIO_010081: Mtrr
subclass of: SO_0000673
so part of: Mtrr
location: join(3969972..3970069,3971231..3971385,3973245..3973398,3975970..3976087,3976548..3976926,3979759..3979881,3980803..3980956,3981605..3981693,3983056..3983236,3984492..3984534,3985903..3986086,3987356..3987474,3988666..3988758,3988867..3989043,3991169..3991529)
location: region:3969972-3991529:1
so has part: feature:3969972-3970069:1:exon
so has part: feature:3971231-3971385:1:exon
so has part: feature:3973245-3973398:1:exon
so has part: feature:3975970-3976087:1:exon
so has part: feature:3976548-3976926:1:exon
so has part: feature:3979759-3979881:1:exon
so has part: feature:3980803-3980956:1:exon
so has part: feature:3981605-3981693:1:exon
so has part: feature:3983056-3983236:1:exon
so has part: feature:3984492-3984534:1:exon
so has part: feature:3985903-3986086:1:exon
so has part: feature:3987356-3987474:1:exon
so has part: feature:3988666-3988758:1:exon
so has part: feature:3988867-3989043:1:exon
so has part: feature:3991169-3991529:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3969972-3970069:1:exon

position:3970069:1
position: 3970069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3971231-3971385:1:exon

position:3971231:1
position: 3971231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3971385:1
position: 3971385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3973245-3973398:1:exon

position:3973245:1
position: 3973245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3973398:1
position: 3973398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3975970-3976087:1:exon

position:3975970:1
position: 3975970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3976087:1
position: 3976087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3976548-3976926:1:exon

position:3976548:1
position: 3976548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3976926:1
position: 3976926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3979759-3979881:1:exon

position:3979759:1
position: 3979759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3979881:1
position: 3979881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3980803-3980956:1:exon

position:3980803:1
position: 3980803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3980956:1
position: 3980956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3981605-3981693:1:exon

position:3981605:1
position: 3981605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3981693:1
position: 3981693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3983056-3983236:1:exon

position:3983056:1
position: 3983056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3983236:1
position: 3983236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3984492-3984534:1:exon

position:3984492:1
position: 3984492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3984534:1
position: 3984534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3985903-3986086:1:exon

position:3985903:1
position: 3985903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3986086:1
position: 3986086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3987356-3987474:1:exon

position:3987356:1
position: 3987356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3987474:1
position: 3987474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3988666-3988758:1:exon

position:3988666:1
position: 3988666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3988758:1
position: 3988758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3988867-3989043:1:exon

position:3988867:1
position: 3988867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3989043:1
position: 3989043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3991169-3991529:1:exon

position:3991169:1
position: 3991169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mtrr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Mtrr
product: 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048368400.1
SIO_010081: Mtrr
subclass of: SO_0000673
so part of: Mtrr
location: join(3969980..3970059,3971231..3971385,3973245..3973398,3975970..3976087,3976548..3976926,3979759..3979881,3980803..3980956,3981605..3981693,3983056..3983236,3984492..3984534,3985903..3986086,3987356..3987474,3988666..3988758,3988867..3989043,3991169..3991529)
location: region:3969980-3991529:1
so has part: feature:3969980-3970059:1:exon
so has part: feature:3971231-3971385:1:exon
so has part: feature:3973245-3973398:1:exon
so has part: feature:3975970-3976087:1:exon
so has part: feature:3976548-3976926:1:exon
so has part: feature:3979759-3979881:1:exon
so has part: feature:3980803-3980956:1:exon
so has part: feature:3981605-3981693:1:exon
so has part: feature:3983056-3983236:1:exon
so has part: feature:3984492-3984534:1:exon
so has part: feature:3985903-3986086:1:exon
so has part: feature:3987356-3987474:1:exon
so has part: feature:3988666-3988758:1:exon
so has part: feature:3988867-3989043:1:exon
so has part: feature:3991169-3991529:1:exon

position:3969980:1
position: 3969980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3969980-3970059:1:exon

position:3970059:1
position: 3970059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3971231-3971385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3973245-3973398:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3975970-3976087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3976548-3976926:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3979759-3979881:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3980803-3980956:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3981605-3981693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3983056-3983236:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3984492-3984534:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3985903-3986086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3987356-3987474:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3988666-3988758:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3988867-3989043:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3991169-3991529:1:exon

Mtrr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Mtrr
product: 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048368399.1
SIO_010081: Mtrr
subclass of: SO_0000673
so part of: Mtrr
location: join(3969997..3970059,3971225..3971385,3973245..3973398,3975970..3976087,3976548..3976926,3979759..3979881,3980803..3980956,3981605..3981693,3983056..3983236,3984492..3984534,3985903..3986086,3987356..3987474,3988666..3988758,3988867..3989043,3991169..3991529)
location: region:3969997-3991529:1
so has part: feature:3969997-3970059:1:exon
so has part: feature:3971225-3971385:1:exon
so has part: feature:3973245-3973398:1:exon
so has part: feature:3975970-3976087:1:exon
so has part: feature:3976548-3976926:1:exon
so has part: feature:3979759-3979881:1:exon
so has part: feature:3980803-3980956:1:exon
so has part: feature:3981605-3981693:1:exon
so has part: feature:3983056-3983236:1:exon
so has part: feature:3984492-3984534:1:exon
so has part: feature:3985903-3986086:1:exon
so has part: feature:3987356-3987474:1:exon
so has part: feature:3988666-3988758:1:exon
so has part: feature:3988867-3989043:1:exon
so has part: feature:3991169-3991529:1:exon

position:3969997:1
position: 3969997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3969997-3970059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3971225-3971385:1:exon

position:3971225:1
position: 3971225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3973245-3973398:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3975970-3976087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3976548-3976926:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3979759-3979881:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3980803-3980956:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3981605-3981693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3983056-3983236:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3984492-3984534:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3985903-3986086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3987356-3987474:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3988666-3988758:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3988867-3989043:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3991169-3991529:1:exon

Mtrr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Mtrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methionine synthase reductase
translation: MRRFLLLYATQKGQAKAIAEEIQEQAAGHGFSADLHCISESDKYDLNTETAPLVVVVSTTGTGDPPDTARKFVKEIHDKTLPPDFFAHLRYGLLGLGDSEYTYFCNGGKVIDKRLQELGAQHFYDTGHADDCVGLELVVEPWIAGLWTALTKHFQSSGGRGEMSRALPRTSSTFLRTDPSKPETLHVESQIELLRLEDPGGRESEVSDRGEPNGSPSSPLIQDSEPSLVRSVPPLSQASLSIPALPPEYLQVHLRESLGQEESQELVTSVDPVFQVPVSKATQLTADDAVKTTLLLELDIAKTGFSYQPGDAFNVICPNSDSEVRSLLRRLRLADQREHRVFLEIKADTKKKGAVLPQHVPEGCSLQFLLTWCLEIRSVPKKAFVRALAEHARDGAEKRRLQELCSKQGAPDYARFVRDAAAGLLDLLLAFPSCRPPLGLLLEHLPKLQPRPYSCASSSLRHPGALRFAFTVVELPAPAAGGARRGVCTGWLAALAAPLLQPDARAAQADGREAPAPKISISPRPPSSFHLPSDRSAPVIMVGPGTGVAPFIGFLQHREKLQEEHPEESFGATWLFFGCRHEARDYLFREELRHFLECGTLTHLKVSFSRDAPEGPAGPRRVQDNLRLHGPGLAGALLRENGHVYVCGDAKNMARDVHDALVEIISQEAGVDRLDAVKTLAALKEEKRYLQDVWS
SIO_010081: Mtrr
subclass of: SO_0000673
so part of: Mtrr
location: join(3971257..3971385,3973245..3973398,3975970..3976087,3976548..3976926,3979759..3979881,3980803..3980956,3981605..3981693,3983056..3983236,3984492..3984534,3985903..3986086,3987356..3987474,3988666..3988758,3988867..3989043,3991169..3991313)
location: region:3971257-3991313:1
so has part: feature:3971257-3971385:1:exon
so has part: feature:3973245-3973398:1:exon
so has part: feature:3975970-3976087:1:exon
so has part: feature:3976548-3976926:1:exon
so has part: feature:3979759-3979881:1:exon
so has part: feature:3980803-3980956:1:exon
so has part: feature:3981605-3981693:1:exon
so has part: feature:3983056-3983236:1:exon
so has part: feature:3984492-3984534:1:exon
so has part: feature:3985903-3986086:1:exon
so has part: feature:3987356-3987474:1:exon
so has part: feature:3988666-3988758:1:exon
so has part: feature:3988867-3989043:1:exon
so has part: feature:3991169-3991313:1:exon

XP_048224356.1
type: Protein
SIO_000068: ncbiprotein

position:3971257:1
position: 3971257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3991313:1
position: 3991313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3971257-3971385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3973245-3973398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3975970-3976087:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3976548-3976926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3979759-3979881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3980803-3980956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3981605-3981693:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3983056-3983236:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3984492-3984534:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3985903-3986086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3987356-3987474:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3988666-3988758:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3988867-3989043:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3991169-3991313:1:exon

Mtrr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Mtrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methionine synthase reductase
translation: MRRFLLLYATQKGQAKAIAEEIQEQAAGHGFSADLHCISESDKYDLNTETAPLVVVVSTTGTGDPPDTARKFVKEIHDKTLPPDFFAHLRYGLLGLGDSEYTYFCNGGKVIDKRLQELGAQHFYDTGHADDCVGLELVVEPWIAGLWTALTKHFQSSGGRGEMSRALPRTSSTFLRTDPSKPETLHVESQIELLRLEDPGGRESEVSDRGEPNGSPSSPLIQDSEPSLVRSVPPLSQASLSIPALPPEYLQVHLRESLGQEESQELVTSVDPVFQVPVSKATQLTADDAVKTTLLLELDIAKTGFSYQPGDAFNVICPNSDSEVRSLLRRLRLADQREHRVFLEIKADTKKKGAVLPQHVPEGCSLQFLLTWCLEIRSVPKKAFVRALAEHARDGAEKRRLQELCSKQGAPDYARFVRDAAAGLLDLLLAFPSCRPPLGLLLEHLPKLQPRPYSCASSSLRHPGALRFAFTVVELPAPAAGGARRGVCTGWLAALAAPLLQPDARAAQADGREAPAPKISISPRPPSSFHLPSDRSAPVIMVGPGTGVAPFIGFLQHREKLQEEHPEESFGATWLFFGCRHEARDYLFREELRHFLECGTLTHLKVSFSRDAPEGPAGPRRVQDNLRLHGPGLAGALLRENGHVYVCGDAKNMARDVHDALVEIISQEAGVDRLDAVKTLAALKEEKRYLQDVWS
SIO_010081: Mtrr
subclass of: SO_0000673
so part of: Mtrr
location: join(3971257..3971385,3973245..3973398,3975970..3976087,3976548..3976926,3979759..3979881,3980803..3980956,3981605..3981693,3983056..3983236,3984492..3984534,3985903..3986086,3987356..3987474,3988666..3988758,3988867..3989043,3991169..3991313)
location: region:3971257-3991313:1
so has part: feature:3971257-3971385:1:exon
so has part: feature:3973245-3973398:1:exon
so has part: feature:3975970-3976087:1:exon
so has part: feature:3976548-3976926:1:exon
so has part: feature:3979759-3979881:1:exon
so has part: feature:3980803-3980956:1:exon
so has part: feature:3981605-3981693:1:exon
so has part: feature:3983056-3983236:1:exon
so has part: feature:3984492-3984534:1:exon
so has part: feature:3985903-3986086:1:exon
so has part: feature:3987356-3987474:1:exon
so has part: feature:3988666-3988758:1:exon
so has part: feature:3988867-3989043:1:exon
so has part: feature:3991169-3991313:1:exon

XP_048224357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3971257-3971385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3973245-3973398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3975970-3976087:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3976548-3976926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3979759-3979881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3980803-3980956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3981605-3981693:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3983056-3983236:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3984492-3984534:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3985903-3986086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3987356-3987474:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3988666-3988758:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3988867-3989043:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3991169-3991313:1:exon

Mtrr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Mtrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methionine synthase reductase
translation: MRRFLLLYATQKGQAKAIAEEIQEQAAGHGFSADLHCISESDKYDLNTETAPLVVVVSTTGTGDPPDTARKFVKEIHDKTLPPDFFAHLRYGLLGLGDSEYTYFCNGGKVIDKRLQELGAQHFYDTGHADDCVGLELVVEPWIAGLWTALTKHFQSSGGRGEMSRALPRTSSTFLRTDPSKPETLHVESQIELLRLEDPGGRESEVSDRGEPNGSPSSPLIQDSEPSLVRSVPPLSQASLSIPALPPEYLQVHLRESLGQEESQELVTSVDPVFQVPVSKATQLTADDAVKTTLLLELDIAKTGFSYQPGDAFNVICPNSDSEVRSLLRRLRLADQREHRVFLEIKADTKKKGAVLPQHVPEGCSLQFLLTWCLEIRSVPKKAFVRALAEHARDGAEKRRLQELCSKQGAPDYARFVRDAAAGLLDLLLAFPSCRPPLGLLLEHLPKLQPRPYSCASSSLRHPGALRFAFTVVELPAPAAGGARRGVCTGWLAALAAPLLQPDARAAQADGREAPAPKISISPRPPSSFHLPSDRSAPVIMVGPGTGVAPFIGFLQHREKLQEEHPEESFGATWLFFGCRHEARDYLFREELRHFLECGTLTHLKVSFSRDAPEGPAGPRRVQDNLRLHGPGLAGALLRENGHVYVCGDAKNMARDVHDALVEIISQEAGVDRLDAVKTLAALKEEKRYLQDVWS
SIO_010081: Mtrr
subclass of: SO_0000673
so part of: Mtrr
location: join(3971257..3971385,3973245..3973398,3975970..3976087,3976548..3976926,3979759..3979881,3980803..3980956,3981605..3981693,3983056..3983236,3984492..3984534,3985903..3986086,3987356..3987474,3988666..3988758,3988867..3989043,3991169..3991313)
location: region:3971257-3991313:1
so has part: feature:3971257-3971385:1:exon
so has part: feature:3973245-3973398:1:exon
so has part: feature:3975970-3976087:1:exon
so has part: feature:3976548-3976926:1:exon
so has part: feature:3979759-3979881:1:exon
so has part: feature:3980803-3980956:1:exon
so has part: feature:3981605-3981693:1:exon
so has part: feature:3983056-3983236:1:exon
so has part: feature:3984492-3984534:1:exon
so has part: feature:3985903-3986086:1:exon
so has part: feature:3987356-3987474:1:exon
so has part: feature:3988666-3988758:1:exon
so has part: feature:3988867-3989043:1:exon
so has part: feature:3991169-3991313:1:exon

XP_048224359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3971257-3971385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3973245-3973398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3975970-3976087:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3976548-3976926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3979759-3979881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3980803-3980956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3981605-3981693:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3983056-3983236:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3984492-3984534:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3985903-3986086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3987356-3987474:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3988666-3988758:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3988867-3989043:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3991169-3991313:1:exon

LOC125367754
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367754
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4307561..4338573
location: region:4307561-4338573:1
so has part: feature:4307561-4338573:1:exon
subclass of: SO_0000011

125367754
type: Gene
SIO_000068: ncbigene

position:4307561:1
position: 4307561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4338573:1
position: 4338573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4307561-4338573:1:exon

LOC125367754
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125367754
product: uncharacterized LOC125367754
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007214144.1
SIO_010081: LOC125367754
subclass of: SO_0000673
so part of: LOC125367754
location: join(4307561..4307571,4309104..4309193,4337465..4338573)
location: region:4307561-4338573:1
so has part: feature:4307561-4307571:1:exon
so has part: feature:4309104-4309193:1:exon
so has part: feature:4337465-4338573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4307561-4307571:1:exon

position:4307571:1
position: 4307571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4309104-4309193:1:exon

position:4309104:1
position: 4309104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4309193:1
position: 4309193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4337465-4338573:1:exon

position:4337465:1
position: 4337465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sema5a
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Sema5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4307957..4679125)
location: region:4307957-4679125:-1
so has part: feature:4307957-4679125:-1:exon
subclass of: SO_0000010

125367751
type: Gene
SIO_000068: ncbigene

position:4307957:-1
position: 4307957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4679125:-1
position: 4679125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4307957-4679125:-1:exon

Sema5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sema5a
product: semaphorin 5A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048368447.1
SIO_010081: Sema5a
subclass of: SO_0000673
so part of: Sema5a
location: complement(join(4307957..4313510,4315118..4315329,4319058..4319102,4320500..4320655,4321789..4321959,4328003..4328221,4330871..4331096,4357155..4357302,4360446..4360589,4363105..4363286,4368713..4368830,4375879..4376086,4398410..4398614,4403859..4403994,4408943..4409228,4417946..4418159,4419830..4419928,4429842..4429904,4479380..4479425,4490051..4490150,4527194..4527391,4586438..4586529,4679011..4679125))
location: region:4307957-4679125:-1
so has part: feature:4679011-4679125:-1:exon
so has part: feature:4586438-4586529:-1:exon
so has part: feature:4527194-4527391:-1:exon
so has part: feature:4490051-4490150:-1:exon
so has part: feature:4479380-4479425:-1:exon
so has part: feature:4429842-4429904:-1:exon
so has part: feature:4419830-4419928:-1:exon
so has part: feature:4417946-4418159:-1:exon
so has part: feature:4408943-4409228:-1:exon
so has part: feature:4403859-4403994:-1:exon
so has part: feature:4398410-4398614:-1:exon
so has part: feature:4375879-4376086:-1:exon
so has part: feature:4368713-4368830:-1:exon
so has part: feature:4363105-4363286:-1:exon
so has part: feature:4360446-4360589:-1:exon
so has part: feature:4357155-4357302:-1:exon
so has part: feature:4330871-4331096:-1:exon
so has part: feature:4328003-4328221:-1:exon
so has part: feature:4321789-4321959:-1:exon
so has part: feature:4320500-4320655:-1:exon
so has part: feature:4319058-4319102:-1:exon
so has part: feature:4315118-4315329:-1:exon
so has part: feature:4307957-4313510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4679011-4679125:-1:exon

position:4679011:-1
position: 4679011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4586438-4586529:-1:exon

position:4586438:-1
position: 4586438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4586529:-1
position: 4586529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4527194-4527391:-1:exon

position:4527194:-1
position: 4527194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4527391:-1
position: 4527391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4490051-4490150:-1:exon

position:4490051:-1
position: 4490051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4490150:-1
position: 4490150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4479380-4479425:-1:exon

position:4479380:-1
position: 4479380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4479425:-1
position: 4479425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4429842-4429904:-1:exon

position:4429842:-1
position: 4429842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4429904:-1
position: 4429904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4419830-4419928:-1:exon

position:4419830:-1
position: 4419830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4419928:-1
position: 4419928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4417946-4418159:-1:exon

position:4417946:-1
position: 4417946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4418159:-1
position: 4418159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4408943-4409228:-1:exon

position:4408943:-1
position: 4408943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4409228:-1
position: 4409228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4403859-4403994:-1:exon

position:4403859:-1
position: 4403859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4403994:-1
position: 4403994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4398410-4398614:-1:exon

position:4398410:-1
position: 4398410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4398614:-1
position: 4398614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4375879-4376086:-1:exon

position:4375879:-1
position: 4375879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4376086:-1
position: 4376086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4368713-4368830:-1:exon

position:4368713:-1
position: 4368713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4368830:-1
position: 4368830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4363105-4363286:-1:exon

position:4363105:-1
position: 4363105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4363286:-1
position: 4363286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4360446-4360589:-1:exon

position:4360446:-1
position: 4360446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4360589:-1
position: 4360589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4357155-4357302:-1:exon

position:4357155:-1
position: 4357155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4357302:-1
position: 4357302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4330871-4331096:-1:exon

position:4330871:-1
position: 4330871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4331096:-1
position: 4331096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4328003-4328221:-1:exon

position:4328003:-1
position: 4328003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4328221:-1
position: 4328221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4321789-4321959:-1:exon

position:4321789:-1
position: 4321789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4321959:-1
position: 4321959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4320500-4320655:-1:exon

position:4320500:-1
position: 4320500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4320655:-1
position: 4320655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4319058-4319102:-1:exon

position:4319058:-1
position: 4319058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4319102:-1
position: 4319102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4315118-4315329:-1:exon

position:4315118:-1
position: 4315118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4315329:-1
position: 4315329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4307957-4313510:-1:exon

position:4313510:-1
position: 4313510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sema5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sema5a
product: semaphorin 5A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048368446.1
SIO_010081: Sema5a
subclass of: SO_0000673
so part of: Sema5a
location: complement(join(4307957..4313510,4315118..4315329,4319058..4319105,4320500..4320655,4321789..4321959,4328003..4328221,4330871..4331096,4357155..4357302,4360446..4360589,4363105..4363286,4368713..4368830,4375879..4376086,4398410..4398614,4403859..4403994,4408943..4409228,4417946..4418159,4419830..4419928,4429842..4429904,4479380..4479425,4490051..4490150,4527194..4527391,4586438..4586529,4679011..4679125))
location: region:4307957-4679125:-1
so has part: feature:4679011-4679125:-1:exon
so has part: feature:4586438-4586529:-1:exon
so has part: feature:4527194-4527391:-1:exon
so has part: feature:4490051-4490150:-1:exon
so has part: feature:4479380-4479425:-1:exon
so has part: feature:4429842-4429904:-1:exon
so has part: feature:4419830-4419928:-1:exon
so has part: feature:4417946-4418159:-1:exon
so has part: feature:4408943-4409228:-1:exon
so has part: feature:4403859-4403994:-1:exon
so has part: feature:4398410-4398614:-1:exon
so has part: feature:4375879-4376086:-1:exon
so has part: feature:4368713-4368830:-1:exon
so has part: feature:4363105-4363286:-1:exon
so has part: feature:4360446-4360589:-1:exon
so has part: feature:4357155-4357302:-1:exon
so has part: feature:4330871-4331096:-1:exon
so has part: feature:4328003-4328221:-1:exon
so has part: feature:4321789-4321959:-1:exon
so has part: feature:4320500-4320655:-1:exon
so has part: feature:4319058-4319105:-1:exon
so has part: feature:4315118-4315329:-1:exon
so has part: feature:4307957-4313510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4679011-4679125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4586438-4586529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4527194-4527391:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4490051-4490150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4479380-4479425:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4429842-4429904:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4419830-4419928:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4417946-4418159:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4408943-4409228:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4403859-4403994:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4398410-4398614:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4375879-4376086:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4368713-4368830:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4363105-4363286:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4360446-4360589:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4357155-4357302:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4330871-4331096:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4328003-4328221:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4321789-4321959:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4320500-4320655:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4319058-4319105:-1:exon

position:4319105:-1
position: 4319105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4315118-4315329:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4307957-4313510:-1:exon

Sema5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sema5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-5A isoform X2
translation: MRGACIITWLFSSLGMWRLVQPKAQDAAHCQRAEHPIVSYKEIGPWLREFRVKNAVDFSRLTFDPGQKELVVGARNYLFRLLLEDLSLIQAVEWGCDEATTKACYSKGKSKEECQNYIRVLLVGGERLFTCGTNAFTPVCTNRSLSNLTEIHDQISGMARCPYSPQHNSTALLTASGELYAATAMDFPGRDPAIYRSLGALPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEHDCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQSTFFLPELDLIYGIFTTNVNSIAASAVCVFNLSAISQAFNGPFKYQENSRSAWLPYPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFLLMHEVVQPVTPVPAFMEDNSRFSHVAVDVVQGRDTLVHIIYLATDYGTIKKVRAPLNQSAGSCVLEEIELFPERRREPIRSLEILHSQSALFVGLQEHVAKVPLKRCQFHRARSTCIGAQDPYCGWDSVMKKCTSLEESLSMTQWEQSISSCPTRNLTVDGSFGLWSPWFPCTHTDGSAVGSCLCRSRSCDSPAPQCGGWQCQGPSMEITNCSRNGGWTPWTSWSPCSTTCGIGFQVRQRSCSNPTPRHGGRVCVGQNREERYCNEHLLCPPHTFWTGWGPWERCTAQCGGGIQARRRTCEHGPDCAGCNVEYQPCNTNACPELKKTTPWTPWTPVNISDNGGHYEQRFRYTCKARLADPNLLEVGRQRIEMRYCSSDGTSGCSTDGLSGDFLRAGRYSAHTVNGAWSAWTSWSQCSRDCSRGIRNRKRVCNNPEPKYGGMPCLGPSLEYQECNILPCPVDGMWSCWSSWSKCSATCGGGHFMRTRSCTNPAPAYGGDICLGLHTEEALCNTQPCPESWSAWSDWSACDASGIQIRARHCILLFPVGSQCSGNTTESRPCVFDSNFIPVSVARSSSVEEKRCGEFNMFHMIAVGLSSSVLGCLLTLLVYTYCQRYQQQSHDATVIHPVSPAPLNTSITNHINKLDKYDSVEAIKAFNKNNLILEERNKYFNPHLTGKTYSNAYFTDLNNYDEY
SIO_010081: Sema5a
subclass of: SO_0000673
so part of: Sema5a
location: complement(join(4313391..4313510,4315118..4315329,4319058..4319102,4320500..4320655,4321789..4321959,4328003..4328221,4330871..4331096,4357155..4357302,4360446..4360589,4363105..4363286,4368713..4368830,4375879..4376086,4398410..4398614,4403859..4403994,4408943..4409228,4417946..4418159,4419830..4419928,4429842..4429904,4479380..4479425,4490051..4490150,4527194..4527317))
location: region:4313391-4527317:-1
so has part: feature:4527194-4527317:-1:exon
so has part: feature:4490051-4490150:-1:exon
so has part: feature:4479380-4479425:-1:exon
so has part: feature:4429842-4429904:-1:exon
so has part: feature:4419830-4419928:-1:exon
so has part: feature:4417946-4418159:-1:exon
so has part: feature:4408943-4409228:-1:exon
so has part: feature:4403859-4403994:-1:exon
so has part: feature:4398410-4398614:-1:exon
so has part: feature:4375879-4376086:-1:exon
so has part: feature:4368713-4368830:-1:exon
so has part: feature:4363105-4363286:-1:exon
so has part: feature:4360446-4360589:-1:exon
so has part: feature:4357155-4357302:-1:exon
so has part: feature:4330871-4331096:-1:exon
so has part: feature:4328003-4328221:-1:exon
so has part: feature:4321789-4321959:-1:exon
so has part: feature:4320500-4320655:-1:exon
so has part: feature:4319058-4319102:-1:exon
so has part: feature:4315118-4315329:-1:exon
so has part: feature:4313391-4313510:-1:exon

XP_048224404.1
type: Protein
SIO_000068: ncbiprotein

position:4313391:-1
position: 4313391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4527317:-1
position: 4527317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4527194-4527317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4490051-4490150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4479380-4479425:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4429842-4429904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4419830-4419928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4417946-4418159:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4408943-4409228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4403859-4403994:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4398410-4398614:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4375879-4376086:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4368713-4368830:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4363105-4363286:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4360446-4360589:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4357155-4357302:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4330871-4331096:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4328003-4328221:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4321789-4321959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4320500-4320655:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4319058-4319102:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4315118-4315329:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4313391-4313510:-1:exon

Sema5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sema5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-5A isoform X1
translation: MRGACIITWLFSSLGMWRLVQPKAQDAAHCQRAEHPIVSYKEIGPWLREFRVKNAVDFSRLTFDPGQKELVVGARNYLFRLLLEDLSLIQAVEWGCDEATTKACYSKGKSKEECQNYIRVLLVGGERLFTCGTNAFTPVCTNRSLSNLTEIHDQISGMARCPYSPQHNSTALLTASGELYAATAMDFPGRDPAIYRSLGALPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEHDCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQSTFFLPELDLIYGIFTTNVNSIAASAVCVFNLSAISQAFNGPFKYQENSRSAWLPYPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFLLMHEVVQPVTPVPAFMEDNSRFSHVAVDVVQGRDTLVHIIYLATDYGTIKKVRAPLNQSAGSCVLEEIELFPERRREPIRSLEILHSQSALFVGLQEHVAKVPLKRCQFHRARSTCIGAQDPYCGWDSVMKKCTSLEESLSMTQWEQSISSCPTRNLTVDGSFGLWSPWFPCTHTDGSAVGSCLCRSRSCDSPAPQCGGWQCQGPSMEITNCSRNGGWTPWTSWSPCSTTCGIGFQVRQRSCSNPTPRHGGRVCVGQNREERYCNEHLLCPPHTFWTGWGPWERCTAQCGGGIQARRRTCEHGPDCAGCNVEYQPCNTNACPELKKTTPWTPWTPVNISDNGGHYEQRFRYTCKARLADPNLLEVGRQRIEMRYCSSDGTSGCSTDGLSGDFLRAGRYSAHTVNGAWSAWTSWSQCSRDCSRGIRNRKRVCNNPEPKYGGMPCLGPSLEYQECNILPCPVDGMWSCWSSWSKCSATCGGGHFMRTRSCTNPAPAYGGDICLGLHTEEALCNTQPCPESWSAWSDWSACDASGIQIRARHCILLFPVGSQCSGNTTESRPCVFDSNFIPEVSVARSSSVEEKRCGEFNMFHMIAVGLSSSVLGCLLTLLVYTYCQRYQQQSHDATVIHPVSPAPLNTSITNHINKLDKYDSVEAIKAFNKNNLILEERNKYFNPHLTGKTYSNAYFTDLNNYDEY
SIO_010081: Sema5a
subclass of: SO_0000673
so part of: Sema5a
location: complement(join(4313391..4313510,4315118..4315329,4319058..4319105,4320500..4320655,4321789..4321959,4328003..4328221,4330871..4331096,4357155..4357302,4360446..4360589,4363105..4363286,4368713..4368830,4375879..4376086,4398410..4398614,4403859..4403994,4408943..4409228,4417946..4418159,4419830..4419928,4429842..4429904,4479380..4479425,4490051..4490150,4527194..4527317))
location: region:4313391-4527317:-1
so has part: feature:4527194-4527317:-1:exon
so has part: feature:4490051-4490150:-1:exon
so has part: feature:4479380-4479425:-1:exon
so has part: feature:4429842-4429904:-1:exon
so has part: feature:4419830-4419928:-1:exon
so has part: feature:4417946-4418159:-1:exon
so has part: feature:4408943-4409228:-1:exon
so has part: feature:4403859-4403994:-1:exon
so has part: feature:4398410-4398614:-1:exon
so has part: feature:4375879-4376086:-1:exon
so has part: feature:4368713-4368830:-1:exon
so has part: feature:4363105-4363286:-1:exon
so has part: feature:4360446-4360589:-1:exon
so has part: feature:4357155-4357302:-1:exon
so has part: feature:4330871-4331096:-1:exon
so has part: feature:4328003-4328221:-1:exon
so has part: feature:4321789-4321959:-1:exon
so has part: feature:4320500-4320655:-1:exon
so has part: feature:4319058-4319105:-1:exon
so has part: feature:4315118-4315329:-1:exon
so has part: feature:4313391-4313510:-1:exon

XP_048224403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4527194-4527317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4490051-4490150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4479380-4479425:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4429842-4429904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4419830-4419928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4417946-4418159:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4408943-4409228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4403859-4403994:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4398410-4398614:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4375879-4376086:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4368713-4368830:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4363105-4363286:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4360446-4360589:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4357155-4357302:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4330871-4331096:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4328003-4328221:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4321789-4321959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4320500-4320655:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4319058-4319105:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4315118-4315329:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4313391-4313510:-1:exon

LOC125367752
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4516864..4517702)
location: region:4516864-4517702:-1
so has part: feature:4516864-4517702:-1:exon
subclass of: SO_0000010

125367752
type: Gene
SIO_000068: ncbigene

position:4516864:-1
position: 4516864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4517702:-1
position: 4517702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4516864-4517702:-1:exon

LOC125367752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125367752
product: nuclear transport factor 2-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368448.1
SIO_010081: LOC125367752
subclass of: SO_0000673
so part of: LOC125367752
location: complement(4516864..4517702)
location: region:4516864-4517702:-1
so has part: feature:4516864-4517702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4516864-4517702:-1:exon

LOC125367752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125367752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transport factor 2-like
translation: MGDKPVWEQIGSSFVQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSVTAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNIDDAWVCTNDMFRLALHNFG
SIO_010081: LOC125367752
subclass of: SO_0000673
so part of: LOC125367752
location: complement(4517253..4517636)
location: region:4517253-4517636:-1
so has part: feature:4517253-4517636:-1:exon

XP_048224405.1
type: Protein
SIO_000068: ncbiprotein

position:4517253:-1
position: 4517253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4517636:-1
position: 4517636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4517253-4517636:-1:exon

LOC125367753
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4680086..4683836
location: region:4680086-4683836:1
so has part: feature:4680086-4683836:1:exon
subclass of: SO_0000011

125367753
type: Gene
SIO_000068: ncbigene

position:4680086:1
position: 4680086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4683836:1
position: 4683836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4680086-4683836:1:exon

LOC125367753
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125367753
product: uncharacterized LOC125367753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_007214143.1
SIO_010081: LOC125367753
subclass of: SO_0000673
so part of: LOC125367753
location: join(4680086..4680133,4682259..4682786,4683112..4683836)
location: region:4680086-4683836:1
so has part: feature:4680086-4680133:1:exon
so has part: feature:4682259-4682786:1:exon
so has part: feature:4683112-4683836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4680086-4680133:1:exon

position:4680133:1
position: 4680133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4682259-4682786:1:exon

position:4682259:1
position: 4682259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4682786:1
position: 4682786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4683112-4683836:1:exon

position:4683112:1
position: 4683112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125367890
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367890
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4682104..4682173
location: region:4682104-4682173:1
so has part: feature:4682104-4682173:1:exon
subclass of: SO_0000578

125367890
type: Gene
SIO_000068: ncbigene

position:4682104:1
position: 4682104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4682173:1
position: 4682173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4682104-4682173:1:exon

LOC125367890
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snoRNA
gene: LOC125367890
product: small nucleolar RNA SNORD123
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01156
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007214186.1
SIO_010081: LOC125367890
subclass of: SO_0000673
so part of: LOC125367890
location: 4682104..4682173
location: region:4682104-4682173:1
so has part: feature:4682104-4682173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4682104-4682173:1:exon

Tas2r1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tas2r1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4732601..4739734)
location: region:4732601-4739734:-1
so has part: feature:4732601-4739734:-1:exon
subclass of: SO_0000010

125367542
type: Gene
SIO_000068: ncbigene

position:4732601:-1
position: 4732601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4739734:-1
position: 4739734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4732601-4739734:-1:exon

Tas2r1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tas2r1
product: taste 2 receptor member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048368232.1
SIO_010081: Tas2r1
subclass of: SO_0000673
so part of: Tas2r1
location: complement(join(4732601..4733704,4734604..4734723,4739720..4739734))
location: region:4732601-4739734:-1
so has part: feature:4739720-4739734:-1:exon
so has part: feature:4734604-4734723:-1:exon
so has part: feature:4732601-4733704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4739720-4739734:-1:exon

position:4739720:-1
position: 4739720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4734604-4734723:-1:exon

position:4734604:-1
position: 4734604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4734723:-1
position: 4734723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4732601-4733704:-1:exon

position:4733704:-1
position: 4733704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tas2r1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tas2r1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: taste receptor type 2 member 1
translation: MVDSQGLSTRAERGTKATWQCPNVEASLVATASERGVVNGIRKPECFVKAPDQIEGKRKTRMIETVSKYTYIPPTGESGYPFLKMIGADHITTLLLTMVQLLTGVVANGIIMTVNAVGLIKQRKTAALDLLLLCLASSRLFLQLYLVFALMMVFSVKQVSIIPVTVVILLFTNEVGLWFATWLGVFYCVKIATIPHPFFLWLKMRISRLVPWLIVGSLLHSAILSAIQGKYAWAVTKRILGNFFFKNTTQPSEIVMPILQSFLFITNLTLPFLIFLTAVGLLIFFLVKHTERMRTMGESASSPGQSAHTSAVLSVLSFLVLYVSHYLVAIFFCTQNYRFGSLFFFLCVLVGGTYPSVHSIILIFVNPKLKQNVKTLLLSLRKCCP
SIO_010081: Tas2r1
subclass of: SO_0000673
so part of: Tas2r1
location: complement(join(4732682..4733704,4734604..4734723,4739720..4739734))
location: region:4732682-4739734:-1
so has part: feature:4739720-4739734:-1:exon
so has part: feature:4734604-4734723:-1:exon
so has part: feature:4732682-4733704:-1:exon

XP_048224189.1
type: Protein
SIO_000068: ncbiprotein

position:4732682:-1
position: 4732682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4739720-4739734:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4734604-4734723:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4732682-4733704:-1:exon

LOC125367543
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4895906..4897183)
location: region:4895906-4897183:-1
so has part: feature:4895906-4897183:-1:exon

125367543
type: Gene
SIO_000068: ncbigene

position:4895906:-1
position: 4895906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4897183:-1
position: 4897183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4895906-4897183:-1:exon

LOC125367543
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125367543
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125367543
subclass of: SO_0000673
so part of: LOC125367543
location: complement(4895906..4896410)
location: region:4895906-4896410:-1
so has part: feature:4895906-4896410:-1:exon

position:4896410:-1
position: 4896410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4895906-4896410:-1:exon

LOC125367543
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125367543
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125367543
subclass of: SO_0000673
so part of: LOC125367543
location: complement(4896799..4896892)
location: region:4896799-4896892:-1
so has part: feature:4896799-4896892:-1:exon

position:4896799:-1
position: 4896799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4896892:-1
position: 4896892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4896799-4896892:-1:exon

LOC125367543
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125367543
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125367543
subclass of: SO_0000673
so part of: LOC125367543
location: complement(4896992..4897183)
location: region:4896992-4897183:-1
so has part: feature:4896992-4897183:-1:exon

position:4896992:-1
position: 4896992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4896992-4897183:-1:exon

Atpsckmt
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Atpsckmt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5083688..5102278)
location: region:5083688-5102278:-1
so has part: feature:5083688-5102278:-1:exon
subclass of: SO_0000010

125367447
type: Gene
SIO_000068: ncbigene

position:5083688:-1
position: 5083688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5102278:-1
position: 5102278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5083688-5102278:-1:exon

Atpsckmt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Atpsckmt
product: ATP synthase c subunit lysine N-methyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048368109.1
SIO_010081: Atpsckmt
subclass of: SO_0000673
so part of: Atpsckmt
location: complement(join(5083688..5084074,5084161..5084407,5084639..5085213,5091672..5091722,5093014..5093151,5096255..5096550,5102224..5102278))
location: region:5083688-5102278:-1
so has part: feature:5102224-5102278:-1:exon
so has part: feature:5096255-5096550:-1:exon
so has part: feature:5093014-5093151:-1:exon
so has part: feature:5091672-5091722:-1:exon
so has part: feature:5084639-5085213:-1:exon
so has part: feature:5084161-5084407:-1:exon
so has part: feature:5083688-5084074:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5102224-5102278:-1:exon

position:5102224:-1
position: 5102224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5096255-5096550:-1:exon

position:5096255:-1
position: 5096255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5096550:-1
position: 5096550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5093014-5093151:-1:exon

position:5093014:-1
position: 5093014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5093151:-1
position: 5093151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5091672-5091722:-1:exon

position:5091672:-1
position: 5091672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5091722:-1
position: 5091722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5084639-5085213:-1:exon

position:5084639:-1
position: 5084639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5085213:-1
position: 5085213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5084161-5084407:-1:exon

position:5084161:-1
position: 5084161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5084407:-1
position: 5084407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5083688-5084074:-1:exon

position:5084074:-1
position: 5084074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Atpsckmt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Atpsckmt
product: ATP synthase c subunit lysine N-methyltransferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048368110.1
SIO_010081: Atpsckmt
subclass of: SO_0000673
so part of: Atpsckmt
location: complement(join(5083688..5084074,5084161..5084407,5084639..5085213,5091672..5091722,5093014..5093151,5096255..5096550,5099932..5099957))
location: region:5083688-5099957:-1
so has part: feature:5099932-5099957:-1:exon
so has part: feature:5096255-5096550:-1:exon
so has part: feature:5093014-5093151:-1:exon
so has part: feature:5091672-5091722:-1:exon
so has part: feature:5084639-5085213:-1:exon
so has part: feature:5084161-5084407:-1:exon
so has part: feature:5083688-5084074:-1:exon

position:5099957:-1
position: 5099957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5099932-5099957:-1:exon

position:5099932:-1
position: 5099932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5096255-5096550:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5093014-5093151:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5091672-5091722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5084639-5085213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5084161-5084407:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5083688-5084074:-1:exon

Atpsckmt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Atpsckmt
product: ATP synthase c subunit lysine N-methyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048368108.1
SIO_010081: Atpsckmt
subclass of: SO_0000673
so part of: Atpsckmt
location: complement(join(5083688..5084074,5084161..5084407,5084639..5085213,5091672..5091722,5093014..5093151,5096255..5097074))
location: region:5083688-5097074:-1
so has part: feature:5096255-5097074:-1:exon
so has part: feature:5093014-5093151:-1:exon
so has part: feature:5091672-5091722:-1:exon
so has part: feature:5084639-5085213:-1:exon
so has part: feature:5084161-5084407:-1:exon
so has part: feature:5083688-5084074:-1:exon

position:5097074:-1
position: 5097074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5096255-5097074:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5093014-5093151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5091672-5091722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5084639-5085213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5084161-5084407:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5083688-5084074:-1:exon

Atpsckmt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Atpsckmt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit C lysine N-methyltransferase isoform X2
translation: MERGLGGGGAATPEMPQEEGPPRLPPDSLEVEGHSLKRSKWGVLFTGIVGGALVAVYAGATPFIAPALRKVCLPFVPATSKQIENVVRMLGHRRGSLVDIGSGDGRIVIAAAKEGFTAVGYELNPWLVWYSRYRAWREGVHGSAKFYISDLWKVSFSQYSNVVIFGVPQMMLQLEKKLELELEDDARVIACRFPFPHWTPDHITGEGTDTVWAYDVGTFRGRGKSLEN
SIO_010081: Atpsckmt
subclass of: SO_0000673
so part of: Atpsckmt
location: complement(join(5085037..5085213,5091672..5091722,5093014..5093151,5096255..5096550,5102224..5102248))
location: region:5085037-5102248:-1
so has part: feature:5102224-5102248:-1:exon
so has part: feature:5096255-5096550:-1:exon
so has part: feature:5093014-5093151:-1:exon
so has part: feature:5091672-5091722:-1:exon
so has part: feature:5085037-5085213:-1:exon

XP_048224066.1
type: Protein
SIO_000068: ncbiprotein

position:5085037:-1
position: 5085037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5102248:-1
position: 5102248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5102224-5102248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5096255-5096550:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5093014-5093151:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5091672-5091722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5085037-5085213:-1:exon

Atpsckmt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Atpsckmt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit C lysine N-methyltransferase isoform X1
translation: MDLLELHEKGLSIGSGAEHLPSMCKALNLIPTTRGGEKGRKKKCSLGFQMCGYMPFFFAFNIGAATPEMPQEEGPPRLPPDSLEVEGHSLKRSKWGVLFTGIVGGALVAVYAGATPFIAPALRKVCLPFVPATSKQIENVVRMLGHRRGSLVDIGSGDGRIVIAAAKEGFTAVGYELNPWLVWYSRYRAWREGVHGSAKFYISDLWKVSFSQYSNVVIFGVPQMMLQLEKKLELELEDDARVIACRFPFPHWTPDHITGEGTDTVWAYDVGTFRGRGKSLEN
SIO_010081: Atpsckmt
subclass of: SO_0000673
so part of: Atpsckmt
location: complement(join(5085037..5085213,5091672..5091722,5093014..5093151,5096255..5096737))
location: region:5085037-5096737:-1
so has part: feature:5096255-5096737:-1:exon
so has part: feature:5093014-5093151:-1:exon
so has part: feature:5091672-5091722:-1:exon
so has part: feature:5085037-5085213:-1:exon

XP_048224065.1
type: Protein
SIO_000068: ncbiprotein

position:5096737:-1
position: 5096737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5096255-5096737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5093014-5093151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5091672-5091722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5085037-5085213:-1:exon

Atpsckmt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Atpsckmt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit C lysine N-methyltransferase isoform X3
translation: MPQEEGPPRLPPDSLEVEGHSLKRSKWGVLFTGIVGGALVAVYAGATPFIAPALRKVCLPFVPATSKQIENVVRMLGHRRGSLVDIGSGDGRIVIAAAKEGFTAVGYELNPWLVWYSRYRAWREGVHGSAKFYISDLWKVSFSQYSNVVIFGVPQMMLQLEKKLELELEDDARVIACRFPFPHWTPDHITGEGTDTVWAYDVGTFRGRGKSLEN
SIO_010081: Atpsckmt
subclass of: SO_0000673
so part of: Atpsckmt
location: complement(join(5085037..5085213,5091672..5091722,5093014..5093151,5096255..5096533))
location: region:5085037-5096533:-1
so has part: feature:5096255-5096533:-1:exon
so has part: feature:5093014-5093151:-1:exon
so has part: feature:5091672-5091722:-1:exon
so has part: feature:5085037-5085213:-1:exon

XP_048224067.1
type: Protein
SIO_000068: ncbiprotein

position:5096533:-1
position: 5096533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5096255-5096533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5093014-5093151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5091672-5091722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5085037-5085213:-1:exon

LOC125367449
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5094646..5095100
location: region:5094646-5095100:1
so has part: feature:5094646-5095100:1:exon
subclass of: SO_0000011

125367449
type: Gene
SIO_000068: ncbigene

position:5094646:1
position: 5094646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5095100:1
position: 5095100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5094646-5095100:1:exon

LOC125367449
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125367449
product: uncharacterized LOC125367449
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007214088.1
SIO_010081: LOC125367449
subclass of: SO_0000673
so part of: LOC125367449
location: join(5094646..5094688,5094925..5095100)
location: region:5094646-5095100:1
so has part: feature:5094646-5094688:1:exon
so has part: feature:5094925-5095100:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5094646-5094688:1:exon

position:5094688:1
position: 5094688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5094925-5095100:1:exon

position:5094925:1
position: 5094925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cct5
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Cct5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5102581..5117614
location: region:5102581-5117614:1
so has part: feature:5102581-5117614:1:exon
subclass of: SO_0000010

125367445
type: Gene
SIO_000068: ncbigene

position:5102581:1
position: 5102581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5117614:1
position: 5117614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5102581-5117614:1:exon

Cct5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cct5
product: chaperonin containing TCP1 subunit 5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368107.1
SIO_010081: Cct5
subclass of: SO_0000673
so part of: Cct5
location: join(5102581..5102730,5107597..5107657,5108585..5108749,5110503..5110701,5111511..5111703,5112021..5112170,5113943..5114062,5114580..5114765,5115431..5115568,5116058..5116238,5117268..5117614)
location: region:5102581-5117614:1
so has part: feature:5102581-5102730:1:exon
so has part: feature:5107597-5107657:1:exon
so has part: feature:5108585-5108749:1:exon
so has part: feature:5110503-5110701:1:exon
so has part: feature:5111511-5111703:1:exon
so has part: feature:5112021-5112170:1:exon
so has part: feature:5113943-5114062:1:exon
so has part: feature:5114580-5114765:1:exon
so has part: feature:5115431-5115568:1:exon
so has part: feature:5116058-5116238:1:exon
so has part: feature:5117268-5117614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5102581-5102730:1:exon

position:5102730:1
position: 5102730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5107597-5107657:1:exon

position:5107597:1
position: 5107597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5107657:1
position: 5107657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5108585-5108749:1:exon

position:5108585:1
position: 5108585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5108749:1
position: 5108749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5110503-5110701:1:exon

position:5110503:1
position: 5110503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5110701:1
position: 5110701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5111511-5111703:1:exon

position:5111511:1
position: 5111511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5111703:1
position: 5111703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5112021-5112170:1:exon

position:5112021:1
position: 5112021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5112170:1
position: 5112170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5113943-5114062:1:exon

position:5113943:1
position: 5113943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5114062:1
position: 5114062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5114580-5114765:1:exon

position:5114580:1
position: 5114580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5114765:1
position: 5114765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5115431-5115568:1:exon

position:5115431:1
position: 5115431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5115568:1
position: 5115568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5116058-5116238:1:exon

position:5116058:1
position: 5116058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5116238:1
position: 5116238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5117268-5117614:1:exon

position:5117268:1
position: 5117268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cct5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cct5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 1 subunit epsilon
translation: MTSVGTLAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGEVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMVNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVENAKIAILTCPFEPPKPKTKHKLDVTSVDDYKALQQYEKEKFEEMITQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVGQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKDKNPALGIDCLHRGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGESEE
SIO_010081: Cct5
subclass of: SO_0000673
so part of: Cct5
location: join(5102626..5102730,5107597..5107657,5108585..5108749,5110503..5110701,5111511..5111703,5112021..5112170,5113943..5114062,5114580..5114765,5115431..5115568,5116058..5116238,5117268..5117395)
location: region:5102626-5117395:1
so has part: feature:5102626-5102730:1:exon
so has part: feature:5107597-5107657:1:exon
so has part: feature:5108585-5108749:1:exon
so has part: feature:5110503-5110701:1:exon
so has part: feature:5111511-5111703:1:exon
so has part: feature:5112021-5112170:1:exon
so has part: feature:5113943-5114062:1:exon
so has part: feature:5114580-5114765:1:exon
so has part: feature:5115431-5115568:1:exon
so has part: feature:5116058-5116238:1:exon
so has part: feature:5117268-5117395:1:exon

XP_048224064.1
type: Protein
SIO_000068: ncbiprotein

position:5102626:1
position: 5102626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5117395:1
position: 5117395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5102626-5102730:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5107597-5107657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5108585-5108749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5110503-5110701:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5111511-5111703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5112021-5112170:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5113943-5114062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5114580-5114765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5115431-5115568:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5116058-5116238:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5117268-5117395:1:exon

Cmbl
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Cmbl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5120618..5127830)
location: region:5120618-5127830:-1
so has part: feature:5120618-5127830:-1:exon
subclass of: SO_0000010

125367448
type: Gene
SIO_000068: ncbigene

position:5120618:-1
position: 5120618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5127830:-1
position: 5127830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5120618-5127830:-1:exon

Cmbl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cmbl
product: carboxymethylenebutenolidase homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368111.1
SIO_010081: Cmbl
subclass of: SO_0000673
so part of: Cmbl
location: complement(join(5120618..5121339,5122921..5123012,5125674..5125816,5126085..5126192,5127559..5127830))
location: region:5120618-5127830:-1
so has part: feature:5127559-5127830:-1:exon
so has part: feature:5126085-5126192:-1:exon
so has part: feature:5125674-5125816:-1:exon
so has part: feature:5122921-5123012:-1:exon
so has part: feature:5120618-5121339:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5127559-5127830:-1:exon

position:5127559:-1
position: 5127559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5126085-5126192:-1:exon

position:5126085:-1
position: 5126085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5126192:-1
position: 5126192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5125674-5125816:-1:exon

position:5125674:-1
position: 5125674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5125816:-1
position: 5125816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5122921-5123012:-1:exon

position:5122921:-1
position: 5122921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5123012:-1
position: 5123012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5120618-5121339:-1:exon

position:5121339:-1
position: 5121339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cmbl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cmbl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxymethylenebutenolidase homolog
translation: MANEAHPCPCDIGHRLEYGGMGHEVQAGHIQAYVTRSPVDAGKAVVIVQDIFGWKLPNTRYIADMIAGNGYTVIVPDFFVGQEPWSPSGDWSMFPEWLKTKNARKINREFDAALKYLKEQCHAQKVGVVGFCWGGVAVHHIMATYPDVRAGVSLYGIVKDSEDVYSLKNPTLFIFAEKDAVIPLEQVSSLTQKLKEHCKVEYQIKTFSGQTHGFVHRKKEDCLPADKPYIDEARRNLIEWLNKYV
SIO_010081: Cmbl
subclass of: SO_0000673
so part of: Cmbl
location: complement(join(5121160..5121339,5122921..5123012,5125674..5125816,5126085..5126192,5127559..5127773))
location: region:5121160-5127773:-1
so has part: feature:5127559-5127773:-1:exon
so has part: feature:5126085-5126192:-1:exon
so has part: feature:5125674-5125816:-1:exon
so has part: feature:5122921-5123012:-1:exon
so has part: feature:5121160-5121339:-1:exon

XP_048224068.1
type: Protein
SIO_000068: ncbiprotein

position:5121160:-1
position: 5121160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5127773:-1
position: 5127773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5127559-5127773:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5126085-5126192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5125674-5125816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5122921-5123012:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5121160-5121339:-1:exon

Marchf6
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Marchf6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5158623..5216702
location: region:5158623-5216702:1
so has part: feature:5158623-5216702:1:exon
subclass of: SO_0000010

125367393
type: Gene
SIO_000068: ncbigene

position:5158623:1
position: 5158623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5216702:1
position: 5216702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5158623-5216702:1:exon

Marchf6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Marchf6
product: membrane associated ring-CH-type finger 6, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368038.1
SIO_010081: Marchf6
subclass of: SO_0000673
so part of: Marchf6
location: join(5158623..5158855,5169702..5169798,5170483..5170556,5173219..5173362,5176008..5176080,5178437..5178605,5179918..5180107,5183400..5183461,5184019..5184051,5187725..5187776,5188587..5188645,5189951..5190031,5190268..5190336,5190411..5190485,5191035..5191169,5191867..5191986,5192922..5193022,5193875..5194012,5197699..5197900,5199726..5199795,5200806..5200987,5203050..5203184,5205338..5205427,5206905..5207037,5209740..5209875,5213260..5216702)
location: region:5158623-5216702:1
so has part: feature:5158623-5158855:1:exon
so has part: feature:5169702-5169798:1:exon
so has part: feature:5170483-5170556:1:exon
so has part: feature:5173219-5173362:1:exon
so has part: feature:5176008-5176080:1:exon
so has part: feature:5178437-5178605:1:exon
so has part: feature:5179918-5180107:1:exon
so has part: feature:5183400-5183461:1:exon
so has part: feature:5184019-5184051:1:exon
so has part: feature:5187725-5187776:1:exon
so has part: feature:5188587-5188645:1:exon
so has part: feature:5189951-5190031:1:exon
so has part: feature:5190268-5190336:1:exon
so has part: feature:5190411-5190485:1:exon
so has part: feature:5191035-5191169:1:exon
so has part: feature:5191867-5191986:1:exon
so has part: feature:5192922-5193022:1:exon
so has part: feature:5193875-5194012:1:exon
so has part: feature:5197699-5197900:1:exon
so has part: feature:5199726-5199795:1:exon
so has part: feature:5200806-5200987:1:exon
so has part: feature:5203050-5203184:1:exon
so has part: feature:5205338-5205427:1:exon
so has part: feature:5206905-5207037:1:exon
so has part: feature:5209740-5209875:1:exon
so has part: feature:5213260-5216702:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5158623-5158855:1:exon

position:5158855:1
position: 5158855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5169702-5169798:1:exon

position:5169702:1
position: 5169702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5169798:1
position: 5169798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5170483-5170556:1:exon

position:5170483:1
position: 5170483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5170556:1
position: 5170556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5173219-5173362:1:exon

position:5173219:1
position: 5173219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5173362:1
position: 5173362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5176008-5176080:1:exon

position:5176008:1
position: 5176008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5176080:1
position: 5176080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5178437-5178605:1:exon

position:5178437:1
position: 5178437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5178605:1
position: 5178605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5179918-5180107:1:exon

position:5179918:1
position: 5179918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5180107:1
position: 5180107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5183400-5183461:1:exon

position:5183400:1
position: 5183400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5183461:1
position: 5183461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5184019-5184051:1:exon

position:5184019:1
position: 5184019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5184051:1
position: 5184051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5187725-5187776:1:exon

position:5187725:1
position: 5187725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5187776:1
position: 5187776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5188587-5188645:1:exon

position:5188587:1
position: 5188587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5188645:1
position: 5188645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5189951-5190031:1:exon

position:5189951:1
position: 5189951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5190031:1
position: 5190031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5190268-5190336:1:exon

position:5190268:1
position: 5190268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5190336:1
position: 5190336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5190411-5190485:1:exon

position:5190411:1
position: 5190411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5190485:1
position: 5190485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5191035-5191169:1:exon

position:5191035:1
position: 5191035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5191169:1
position: 5191169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5191867-5191986:1:exon

position:5191867:1
position: 5191867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5191986:1
position: 5191986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5192922-5193022:1:exon

position:5192922:1
position: 5192922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5193022:1
position: 5193022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5193875-5194012:1:exon

position:5193875:1
position: 5193875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5194012:1
position: 5194012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5197699-5197900:1:exon

position:5197699:1
position: 5197699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5197900:1
position: 5197900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5199726-5199795:1:exon

position:5199726:1
position: 5199726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5199795:1
position: 5199795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5200806-5200987:1:exon

position:5200806:1
position: 5200806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5200987:1
position: 5200987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5203050-5203184:1:exon

position:5203050:1
position: 5203050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5203184:1
position: 5203184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5205338-5205427:1:exon

position:5205338:1
position: 5205338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5205427:1
position: 5205427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5206905-5207037:1:exon

position:5206905:1
position: 5206905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5207037:1
position: 5207037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:5209740-5209875:1:exon

position:5209740:1
position: 5209740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5209875:1
position: 5209875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:5213260-5216702:1:exon

position:5213260:1
position: 5213260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Marchf6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Marchf6
product: membrane associated ring-CH-type finger 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048368040.1
SIO_010081: Marchf6
subclass of: SO_0000673
so part of: Marchf6
location: join(5158674..5158855,5169702..5169798,5170483..5170556,5173219..5173362,5176008..5176080,5178437..5178605,5179918..5180107,5183400..5183461,5184019..5184051,5187725..5187776,5188587..5188645,5189951..5190031,5190268..5190336,5190411..5190485,5191035..5191169,5191867..5191986,5192922..5193022,5193875..5194012,5197699..5197900,5199726..5199795,5200806..5200987,5203050..5203184,5205338..5205447,5206473..5206494)
location: region:5158674-5206494:1
so has part: feature:5158674-5158855:1:exon
so has part: feature:5169702-5169798:1:exon
so has part: feature:5170483-5170556:1:exon
so has part: feature:5173219-5173362:1:exon
so has part: feature:5176008-5176080:1:exon
so has part: feature:5178437-5178605:1:exon
so has part: feature:5179918-5180107:1:exon
so has part: feature:5183400-5183461:1:exon
so has part: feature:5184019-5184051:1:exon
so has part: feature:5187725-5187776:1:exon
so has part: feature:5188587-5188645:1:exon
so has part: feature:5189951-5190031:1:exon
so has part: feature:5190268-5190336:1:exon
so has part: feature:5190411-5190485:1:exon
so has part: feature:5191035-5191169:1:exon
so has part: feature:5191867-5191986:1:exon
so has part: feature:5192922-5193022:1:exon
so has part: feature:5193875-5194012:1:exon
so has part: feature:5197699-5197900:1:exon
so has part: feature:5199726-5199795:1:exon
so has part: feature:5200806-5200987:1:exon
so has part: feature:5203050-5203184:1:exon
so has part: feature:5205338-5205447:1:exon
so has part: feature:5206473-5206494:1:exon

position:5158674:1
position: 5158674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5206494:1
position: 5206494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5158674-5158855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5169702-5169798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5170483-5170556:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5173219-5173362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5176008-5176080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5178437-5178605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5179918-5180107:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5183400-5183461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5184019-5184051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5187725-5187776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5188587-5188645:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5189951-5190031:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5190268-5190336:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5190411-5190485:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5191035-5191169:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5191867-5191986:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5192922-5193022:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5193875-5194012:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5197699-5197900:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5199726-5199795:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5200806-5200987:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5203050-5203184:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5205338-5205447:1:exon

position:5205447:1
position: 5205447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5206473-5206494:1:exon

position:5206473:1
position: 5206473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Marchf6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Marchf6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MARCHF6 isoform X1
translation: MDTAEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYSPDMPSRLPIQDIFAGLVTSIGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLFTGSVSSLLTLPLDMLSTENLLADCLQGCFVVTCTLCAFISLVWLREQIVHGGAPIWLEHAAPPFNAAGHHQNEAPAGGNGADNVAADQPANPPAENAVVGENPEAQDDQAEEEEEDNEEEDDAGAEDAAEANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVVSLNTLFILVFAFCPYHIGHFSLVGLGFEEHVQASHFEGLITTIVGYILLAITLIICHGLATLVKFHRSRRLLGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDATLKDRELSFQSAPGTTMFLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRFILSVIVFGSIVLLMLWLPIRIIKSLLPNFLPYNVMLYSDAPVSELSLELLLLQVVLPALLEQGHTRQWLKGLVRAWTVTAGYLLDLHSYLLGDQEENENSANQQVNNNQHARNNAIPVVGEGLHAAHQAILQQGGPVGFQPYRRPLNFPLRIFLLIVFMCITLLIASLICLTLPVFAGRWLMSFWTGTAKIHELYTAACGLYVCWLTIRAVTVLVAWMPQGRRVIFQKVKEWSLMIMKTLIVAVLLAGVVPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAKIIAAITLMGPQWWLKTVIEQVYANGIRNIDLHYIIRKLAAPVISVLLLSLCVPYVIASGIVPLLGVTAEMQNLVHRRIYPFLLMVVVLMGILSFQVRQFKRLYEHIKNDKYLVGQRLVNYERKSGKQGTSAPPPQSSQE
SIO_010081: Marchf6
subclass of: SO_0000673
so part of: Marchf6
location: join(5158837..5158855,5169702..5169798,5170483..5170556,5173219..5173362,5176008..5176080,5178437..5178605,5179918..5180107,5183400..5183461,5184019..5184051,5187725..5187776,5188587..5188645,5189951..5190031,5190268..5190336,5190411..5190485,5191035..5191169,5191867..5191986,5192922..5193022,5193875..5194012,5197699..5197900,5199726..5199795,5200806..5200987,5203050..5203184,5205338..5205427,5206905..5207037,5209740..5209875,5213260..5213350)
location: region:5158837-5213350:1
so has part: feature:5158837-5158855:1:exon
so has part: feature:5169702-5169798:1:exon
so has part: feature:5170483-5170556:1:exon
so has part: feature:5173219-5173362:1:exon
so has part: feature:5176008-5176080:1:exon
so has part: feature:5178437-5178605:1:exon
so has part: feature:5179918-5180107:1:exon
so has part: feature:5183400-5183461:1:exon
so has part: feature:5184019-5184051:1:exon
so has part: feature:5187725-5187776:1:exon
so has part: feature:5188587-5188645:1:exon
so has part: feature:5189951-5190031:1:exon
so has part: feature:5190268-5190336:1:exon
so has part: feature:5190411-5190485:1:exon
so has part: feature:5191035-5191169:1:exon
so has part: feature:5191867-5191986:1:exon
so has part: feature:5192922-5193022:1:exon
so has part: feature:5193875-5194012:1:exon
so has part: feature:5197699-5197900:1:exon
so has part: feature:5199726-5199795:1:exon
so has part: feature:5200806-5200987:1:exon
so has part: feature:5203050-5203184:1:exon
so has part: feature:5205338-5205427:1:exon
so has part: feature:5206905-5207037:1:exon
so has part: feature:5209740-5209875:1:exon
so has part: feature:5213260-5213350:1:exon

XP_048223995.1
type: Protein
SIO_000068: ncbiprotein

position:5158837:1
position: 5158837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5213350:1
position: 5213350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5158837-5158855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5169702-5169798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5170483-5170556:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5173219-5173362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5176008-5176080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5178437-5178605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5179918-5180107:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5183400-5183461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5184019-5184051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5187725-5187776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5188587-5188645:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5189951-5190031:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5190268-5190336:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5190411-5190485:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5191035-5191169:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5191867-5191986:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5192922-5193022:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5193875-5194012:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5197699-5197900:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5199726-5199795:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5200806-5200987:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5203050-5203184:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5205338-5205427:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5206905-5207037:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5209740-5209875:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5213260-5213350:1:exon

Marchf6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Marchf6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MARCHF6 isoform X2
translation: MDTAEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYSPDMPSRLPIQDIFAGLVTSIGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLFTGSVSSLLTLPLDMLSTENLLADCLQGCFVVTCTLCAFISLVWLREQIVHGGAPIWLEHAAPPFNAAGHHQNEAPAGGNGADNVAADQPANPPAENAVVGENPEAQDDQAEEEEEDNEEEDDAGAEDAAEANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVVSLNTLFILVFAFCPYHIGHFSLVGLGFEEHVQASHFEGLITTIVGYILLAITLIICHGLATLVKFHRSRRLLGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDATLKDRELSFQSAPGTTMFLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRFILSVIVFGSIVLLMLWLPIRIIKSLLPNFLPYNVMLYSDAPVSELSLELLLLQVVLPALLEQGHTRQWLKGLVRAWTVTAGYLLDLHSYLLGDQEENENSANQQVNNNQHARNNAIPVVGEGLHAAHQAILQQGGPVGFQPYRRPLNFPLRIFLLIVFMCITLLIASLICLTLPVFAGRWLMSFWTGTAKIHELYTAACGLYVCWLTIRAVTVLVAWMPQGRRVIFQKVKEWSLMIMKTLIVAVLLAGVVPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAKIIAAITLMGPQWWLKTVIEQVSTEFSEN
SIO_010081: Marchf6
subclass of: SO_0000673
so part of: Marchf6
location: join(5158837..5158855,5169702..5169798,5170483..5170556,5173219..5173362,5176008..5176080,5178437..5178605,5179918..5180107,5183400..5183461,5184019..5184051,5187725..5187776,5188587..5188645,5189951..5190031,5190268..5190336,5190411..5190485,5191035..5191169,5191867..5191986,5192922..5193022,5193875..5194012,5197699..5197900,5199726..5199795,5200806..5200987,5203050..5203184,5205338..5205447,5206473..5206479)
location: region:5158837-5206479:1
so has part: feature:5158837-5158855:1:exon
so has part: feature:5169702-5169798:1:exon
so has part: feature:5170483-5170556:1:exon
so has part: feature:5173219-5173362:1:exon
so has part: feature:5176008-5176080:1:exon
so has part: feature:5178437-5178605:1:exon
so has part: feature:5179918-5180107:1:exon
so has part: feature:5183400-5183461:1:exon
so has part: feature:5184019-5184051:1:exon
so has part: feature:5187725-5187776:1:exon
so has part: feature:5188587-5188645:1:exon
so has part: feature:5189951-5190031:1:exon
so has part: feature:5190268-5190336:1:exon
so has part: feature:5190411-5190485:1:exon
so has part: feature:5191035-5191169:1:exon
so has part: feature:5191867-5191986:1:exon
so has part: feature:5192922-5193022:1:exon
so has part: feature:5193875-5194012:1:exon
so has part: feature:5197699-5197900:1:exon
so has part: feature:5199726-5199795:1:exon
so has part: feature:5200806-5200987:1:exon
so has part: feature:5203050-5203184:1:exon
so has part: feature:5205338-5205447:1:exon
so has part: feature:5206473-5206479:1:exon

XP_048223997.1
type: Protein
SIO_000068: ncbiprotein

position:5206479:1
position: 5206479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5158837-5158855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5169702-5169798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5170483-5170556:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5173219-5173362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5176008-5176080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5178437-5178605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5179918-5180107:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5183400-5183461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5184019-5184051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5187725-5187776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5188587-5188645:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5189951-5190031:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5190268-5190336:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5190411-5190485:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5191035-5191169:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5191867-5191986:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5192922-5193022:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5193875-5194012:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5197699-5197900:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5199726-5199795:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5200806-5200987:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5203050-5203184:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5205338-5205447:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5206473-5206479:1:exon

Ropn1l
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ropn1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5220981..5231220
location: region:5220981-5231220:1
so has part: feature:5220981-5231220:1:exon
subclass of: SO_0000010

125367691
type: Gene
SIO_000068: ncbigene

position:5220981:1
position: 5220981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5231220:1
position: 5231220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5220981-5231220:1:exon

Ropn1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ropn1l
product: rhophilin associated tail protein 1 like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048368386.1
SIO_010081: Ropn1l
subclass of: SO_0000673
so part of: Ropn1l
location: join(5220981..5221111,5223046..5223169,5225462..5225623,5229609..5229784,5231038..5231220)
location: region:5220981-5231220:1
so has part: feature:5220981-5221111:1:exon
so has part: feature:5223046-5223169:1:exon
so has part: feature:5225462-5225623:1:exon
so has part: feature:5229609-5229784:1:exon
so has part: feature:5231038-5231220:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5220981-5221111:1:exon

position:5221111:1
position: 5221111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5223046-5223169:1:exon

position:5223046:1
position: 5223046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5223169:1
position: 5223169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5225462-5225623:1:exon

position:5225462:1
position: 5225462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5225623:1
position: 5225623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5229609-5229784:1:exon

position:5229609:1
position: 5229609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5229784:1
position: 5229784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5231038-5231220:1:exon

position:5231038:1
position: 5231038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ropn1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ropn1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ropporin-1-like protein
translation: MPLPDTMFCAQQIHIPPELPDILKQFTKAAIRTQPADVLQWSAGYFSALSRGDPLPVKDRIEMPMATQKTDSGLTQGLLKVLHKQCGHRQYVELDDLEKKWKNLCLPVEKFRALLLLDPCVDRIEWRKFLALGCSTLGGSLNSAMKHLCEILTQDPEGGPARIPFETFAYIYRYLAGLDPNILPAETESYLSNLKSNVEARKNGMVGLSDFFVPKRKL
SIO_010081: Ropn1l
subclass of: SO_0000673
so part of: Ropn1l
location: join(5220981..5221111,5223046..5223169,5225462..5225623,5229609..5229784,5231038..5231101)
location: region:5220981-5231101:1
so has part: feature:5220981-5221111:1:exon
so has part: feature:5223046-5223169:1:exon
so has part: feature:5225462-5225623:1:exon
so has part: feature:5229609-5229784:1:exon
so has part: feature:5231038-5231101:1:exon

XP_048224343.1
type: Protein
SIO_000068: ncbiprotein

position:5231101:1
position: 5231101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5220981-5221111:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5223046-5223169:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5225462-5225623:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5229609-5229784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5231038-5231101:1:exon

Ankrd33b
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ankrd33b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5262677..5272428
location: region:5262677-5272428:1
so has part: feature:5262677-5272428:1:exon
subclass of: SO_0000010

125367544
type: Gene
SIO_000068: ncbigene

position:5262677:1
position: 5262677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5272428:1
position: 5272428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5262677-5272428:1:exon

Ankrd33b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ankrd33b
product: ankyrin repeat domain 33B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048368233.1
SIO_010081: Ankrd33b
subclass of: SO_0000673
so part of: Ankrd33b
location: join(5262677..5262991,5272366..5272428)
location: region:5262677-5272428:1
so has part: feature:5262677-5262991:1:exon
so has part: feature:5272366-5272428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5262677-5262991:1:exon

position:5262991:1
position: 5262991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5272366-5272428:1:exon

position:5272366:1
position: 5272366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ankrd33b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ankrd33b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 33B
translation: MVLLLLAGSGPEGGGARCPSPPAPADPEDDEGCEDARSLAADDAFYPPGGGERGGAERGAGVPEAVPEAAALLRAAGANDVELLRALVRRGPRLEEVRETDRNGRAESYEVAPSGLEIATWWRLA
SIO_010081: Ankrd33b
subclass of: SO_0000673
so part of: Ankrd33b
location: join(5262677..5262991,5272366..5272428)
location: region:5262677-5272428:1
so has part: feature:5262677-5262991:1:exon
so has part: feature:5272366-5272428:1:exon

XP_048224190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5262677-5262991:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5272366-5272428:1:exon

LOC125367522
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367522
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5262868..5294155
location: region:5262868-5294155:1
so has part: feature:5262868-5294155:1:exon
subclass of: SO_0000010

125367522
type: Gene
SIO_000068: ncbigene

position:5262868:1
position: 5262868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5294155:1
position: 5294155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5262868-5294155:1:exon

LOC125367522
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125367522
product: ankyrin repeat domain-containing protein 33B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048368216.1
SIO_010081: LOC125367522
subclass of: SO_0000673
so part of: LOC125367522
location: join(5262868..5262991,5283339..5283469,5288320..5288460,5293395..5294155)
location: region:5262868-5294155:1
so has part: feature:5262868-5262991:1:exon
so has part: feature:5283339-5283469:1:exon
so has part: feature:5288320-5288460:1:exon
so has part: feature:5293395-5294155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5262868-5262991:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5283339-5283469:1:exon

position:5283339:1
position: 5283339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5283469:1
position: 5283469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5288320-5288460:1:exon

position:5288320:1
position: 5288320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5288460:1
position: 5288460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5293395-5294155:1:exon

position:5293395:1
position: 5293395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125367522
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125367522
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 33B-like
translation: MTAAQAGHATITNYLLNYFPGVDLERRNVFGFTALMKAAMLGRTDCIRALMLAGADVDARDPRRGLSAQEWAAFTGRAEAARLMRRLLERPCPEQLGDKYRPEWPAAGEALAGKPAAPRGCLQRLRRCLRWALAARGARGPEDGGALDHMVRVTTGLRSPAVAIACRTVCPDSPPRVGQRRWAVPEILAARGTGAGGEARAPPPPPPPPPSPAARRPPAPRQPGLLALPLLRRRGSVRPGLVVPRVRVSKAPAPTFQPERAAGTKDSAHLQIPKWRYKEAKEEKRRAEEAERQRLAREAPRWRRRT
SIO_010081: LOC125367522
subclass of: SO_0000673
so part of: LOC125367522
location: join(5283451..5283469,5288320..5288460,5293395..5294155)
location: region:5283451-5294155:1
so has part: feature:5283451-5283469:1:exon
so has part: feature:5288320-5288460:1:exon
so has part: feature:5293395-5294155:1:exon

XP_048224173.1
type: Protein
SIO_000068: ncbiprotein

position:5283451:1
position: 5283451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5283451-5283469:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5288320-5288460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5293395-5294155:1:exon

LOC125367523
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5307176..5338959)
location: region:5307176-5338959:-1
so has part: feature:5307176-5338959:-1:exon
subclass of: SO_0000010

125367523
type: Gene
SIO_000068: ncbigene

position:5307176:-1
position: 5307176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5338959:-1
position: 5338959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5307176-5338959:-1:exon

LOC125367523
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125367523
product: death associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048368217.1
SIO_010081: LOC125367523
subclass of: SO_0000673
so part of: LOC125367523
location: complement(join(5307176..5307350,5307863..5307905,5329550..5329646,5338828..5338959))
location: region:5307176-5338959:-1
so has part: feature:5338828-5338959:-1:exon
so has part: feature:5329550-5329646:-1:exon
so has part: feature:5307863-5307905:-1:exon
so has part: feature:5307176-5307350:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5338828-5338959:-1:exon

position:5338828:-1
position: 5338828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5329550-5329646:-1:exon

position:5329550:-1
position: 5329550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5329646:-1
position: 5329646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5307863-5307905:-1:exon

position:5307863:-1
position: 5307863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5307905:-1
position: 5307905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5307176-5307350:-1:exon

position:5307350:-1
position: 5307350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125367523
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125367523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death-associated protein 1
translation: MSSPPEGKLETKAGHPPAVKAGGMRIVQKHPHTGDAKEEKDKDEQEWESSSPPKPTVFISGVIARGDKDFPPAAAQVAHQKPHASMDKHASPRTQNIQQPRK
SIO_010081: LOC125367523
subclass of: SO_0000673
so part of: LOC125367523
location: complement(join(5307237..5307350,5307863..5307905,5329550..5329646,5338828..5338882))
location: region:5307237-5338882:-1
so has part: feature:5338828-5338882:-1:exon
so has part: feature:5329550-5329646:-1:exon
so has part: feature:5307863-5307905:-1:exon
so has part: feature:5307237-5307350:-1:exon

XP_048224174.1
type: Protein
SIO_000068: ncbiprotein

position:5307237:-1
position: 5307237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5338882:-1
position: 5338882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5338828-5338882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5329550-5329646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5307863-5307905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5307237-5307350:-1:exon

Ctnnd2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ctnnd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5419785..6136345)
location: region:5419785-6136345:-1
so has part: feature:5419785-6136345:-1:exon
subclass of: SO_0000010

125367516
type: Gene
SIO_000068: ncbigene

position:5419785:-1
position: 5419785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6136345:-1
position: 6136345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5419785-6136345:-1:exon

Ctnnd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ctnnd2
product: catenin delta 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048368208.1
SIO_010081: Ctnnd2
subclass of: SO_0000673
so part of: Ctnnd2
location: complement(join(5419785..5421063,5426496..5426569,5429159..5429290,5432814..5432940,5455630..5455714,5460877..5461087,5507543..5507693,5508655..5508729,5522282..5522455,5529704..5529889,5535702..5535819,5566091..5566274,5600222..5600435,5628851..5628983,5691129..5691381,5702087..5702281,5720674..5721259,5731394..5731566,5748700..5748816,5749195..5749229,5873175..5873287,6001304..6001440,6136159..6136345))
location: region:5419785-6136345:-1
so has part: feature:6136159-6136345:-1:exon
so has part: feature:6001304-6001440:-1:exon
so has part: feature:5873175-5873287:-1:exon
so has part: feature:5749195-5749229:-1:exon
so has part: feature:5748700-5748816:-1:exon
so has part: feature:5731394-5731566:-1:exon
so has part: feature:5720674-5721259:-1:exon
so has part: feature:5702087-5702281:-1:exon
so has part: feature:5691129-5691381:-1:exon
so has part: feature:5628851-5628983:-1:exon
so has part: feature:5600222-5600435:-1:exon
so has part: feature:5566091-5566274:-1:exon
so has part: feature:5535702-5535819:-1:exon
so has part: feature:5529704-5529889:-1:exon
so has part: feature:5522282-5522455:-1:exon
so has part: feature:5508655-5508729:-1:exon
so has part: feature:5507543-5507693:-1:exon
so has part: feature:5460877-5461087:-1:exon
so has part: feature:5455630-5455714:-1:exon
so has part: feature:5432814-5432940:-1:exon
so has part: feature:5429159-5429290:-1:exon
so has part: feature:5426496-5426569:-1:exon
so has part: feature:5419785-5421063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6136159-6136345:-1:exon

position:6136159:-1
position: 6136159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6001304-6001440:-1:exon

position:6001304:-1
position: 6001304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6001440:-1
position: 6001440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5873175-5873287:-1:exon

position:5873175:-1
position: 5873175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5873287:-1
position: 5873287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5749195-5749229:-1:exon

position:5749195:-1
position: 5749195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5749229:-1
position: 5749229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5748700-5748816:-1:exon

position:5748700:-1
position: 5748700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5748816:-1
position: 5748816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5731394-5731566:-1:exon

position:5731394:-1
position: 5731394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5731566:-1
position: 5731566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5720674-5721259:-1:exon

position:5720674:-1
position: 5720674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5721259:-1
position: 5721259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5702087-5702281:-1:exon

position:5702087:-1
position: 5702087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5702281:-1
position: 5702281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5691129-5691381:-1:exon

position:5691129:-1
position: 5691129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5691381:-1
position: 5691381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5628851-5628983:-1:exon

position:5628851:-1
position: 5628851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5628983:-1
position: 5628983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5600222-5600435:-1:exon

position:5600222:-1
position: 5600222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5600435:-1
position: 5600435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5566091-5566274:-1:exon

position:5566091:-1
position: 5566091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5566274:-1
position: 5566274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5535702-5535819:-1:exon

position:5535702:-1
position: 5535702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5535819:-1
position: 5535819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5529704-5529889:-1:exon

position:5529704:-1
position: 5529704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5529889:-1
position: 5529889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5522282-5522455:-1:exon

position:5522282:-1
position: 5522282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5522455:-1
position: 5522455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5508655-5508729:-1:exon

position:5508655:-1
position: 5508655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5508729:-1
position: 5508729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5507543-5507693:-1:exon

position:5507543:-1
position: 5507543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5507693:-1
position: 5507693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5460877-5461087:-1:exon

position:5460877:-1
position: 5460877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5461087:-1
position: 5461087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5455630-5455714:-1:exon

position:5455630:-1
position: 5455630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5455714:-1
position: 5455714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5432814-5432940:-1:exon

position:5432814:-1
position: 5432814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5432940:-1
position: 5432940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5429159-5429290:-1:exon

position:5429159:-1
position: 5429159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5429290:-1
position: 5429290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5426496-5426569:-1:exon

position:5426496:-1
position: 5426496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5426569:-1
position: 5426569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5419785-5421063:-1:exon

position:5421063:-1
position: 5421063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ctnnd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ctnnd2
product: catenin delta 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048368209.1
SIO_010081: Ctnnd2
subclass of: SO_0000673
so part of: Ctnnd2
location: complement(join(5420617..5421063,5426496..5426569,5429159..5429290,5432814..5432940,5455630..5455714,5460877..5461087,5507543..5507693,5522282..5522455,5529704..5529889,5535702..5535819,5566091..5566274,5600222..5600435,5628851..5628983,5691129..5691381,5702087..5702281,5720674..5721259,5731394..5731566,5748700..5748816,5749195..5749229,5873175..5873287,6001304..6001440,6136159..6136345))
location: region:5420617-6136345:-1
so has part: feature:6136159-6136345:-1:exon
so has part: feature:6001304-6001440:-1:exon
so has part: feature:5873175-5873287:-1:exon
so has part: feature:5749195-5749229:-1:exon
so has part: feature:5748700-5748816:-1:exon
so has part: feature:5731394-5731566:-1:exon
so has part: feature:5720674-5721259:-1:exon
so has part: feature:5702087-5702281:-1:exon
so has part: feature:5691129-5691381:-1:exon
so has part: feature:5628851-5628983:-1:exon
so has part: feature:5600222-5600435:-1:exon
so has part: feature:5566091-5566274:-1:exon
so has part: feature:5535702-5535819:-1:exon
so has part: feature:5529704-5529889:-1:exon
so has part: feature:5522282-5522455:-1:exon
so has part: feature:5507543-5507693:-1:exon
so has part: feature:5460877-5461087:-1:exon
so has part: feature:5455630-5455714:-1:exon
so has part: feature:5432814-5432940:-1:exon
so has part: feature:5429159-5429290:-1:exon
so has part: feature:5426496-5426569:-1:exon
so has part: feature:5420617-5421063:-1:exon

position:5420617:-1
position: 5420617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6136159-6136345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6001304-6001440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5873175-5873287:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5749195-5749229:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5748700-5748816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5731394-5731566:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5720674-5721259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5702087-5702281:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5691129-5691381:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5628851-5628983:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5600222-5600435:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5566091-5566274:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5535702-5535819:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5529704-5529889:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5522282-5522455:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5507543-5507693:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5460877-5461087:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5455630-5455714:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5432814-5432940:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5429159-5429290:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5426496-5426569:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5420617-5421063:-1:exon

Ctnnd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ctnnd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: catenin delta-2 isoform X2
translation: MFARKPAGAAPLGAMPVPDQPQSASEKTSSLSPGLNTSNGDGSETETTSAILASVKEQELQFERLTRELEAERQIVASQLERCKLGSETGSVSSISSAEEQFHWQSQDGQKDIEDELTTGLELVDSCIRSLQESGILDPQDYSTSERPSLLSQSALQLNSKPEGSFQYPASYHSNQTLALGDTGPTQLPGRSTQARAAGQSFSQGTTSRAAAAAAGHLPGADPAPPPPPPPREPFAPSLGSAFHLPDAPPAAAAAAALYYSSSTLPAPPRGGSPLAAAAPGGSPTKLQRGGSAPEGAAYAAPRGSSPKQSPSRLAKSYSTSSPINIVVSSAGLSPIRVTSPPTVQSTLSSSPIHQLSSTIGTYATLSPTKRLVHAAEPYGKHSQELYATATLQRPGSLAAGSRASYSSQHGHLGPELRALQSPEHHIDPIYEDRVYQKPPMRSLSQSQGDPLPPAHTGTYRTSTAPSSPGVDSAPLQRAGSQHGTQATTAPFQRASYAAGPASNYADPYRQLQYCPSVESPYSKSGPALPPEGTLARSPSIDSIQKDPREFGWRDPELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNKIALKNCGGIPALVRLLRKTTDLEIRELVTGVLWNLSSCDALKMPIIQDALAVLTNAVIIPHSGWENSPLQDDRKIQLHSSQVLRNATGCLRNVSSAGEEARRRMRECDGLTDALLYVIQSALGSSEIDSKTVENCVCILRNLSYRLAAETSQGQHMGTDELDGLLCGEANGKDAESSGCWGKKKKKKKSQDQWDGVGPLPDCAEPPKGIQMLWHPSIVKPYLTLLSECSNPDTLEGAAGALQNLAAGSWKWSVYIRAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMALDVRNKELIGKYAMRDLVHRLPGGNNSNNAASKAMSDDTVTAVCCTLHEVITKNMENAKALRDAGGIEKLVGISKSKGDKHSPKVVKAASQVLNSMWQYRDLRSLYKKDGWSQYHFVASSSTIERDRQRPYSSSRTPSISPVRVSPNNRSASAPASPREMISLKERKTDYESTGSNATYHGTKGEHTSRKDTMTAQNTGISTLYRNSYGAPAEDIKHNQVSAQPAPQEPSRKDYETYQPFPNSTRNYDESFFEDQVHHRPPASEYTMHLGLKSTGNYVDFYSAARPYSELNYETSHYPASPDSWV
SIO_010081: Ctnnd2
subclass of: SO_0000673
so part of: Ctnnd2
location: complement(join(5420803..5421063,5426496..5426569,5429159..5429290,5432814..5432940,5455630..5455714,5460877..5461087,5507543..5507693,5522282..5522455,5529704..5529889,5535702..5535819,5566091..5566274,5600222..5600435,5628851..5628983,5691129..5691381,5702087..5702281,5720674..5721259,5731394..5731566,5748700..5748816,5749195..5749229,5873175..5873287,6001304..6001440,6136159..6136195))
location: region:5420803-6136195:-1
so has part: feature:6136159-6136195:-1:exon
so has part: feature:6001304-6001440:-1:exon
so has part: feature:5873175-5873287:-1:exon
so has part: feature:5749195-5749229:-1:exon
so has part: feature:5748700-5748816:-1:exon
so has part: feature:5731394-5731566:-1:exon
so has part: feature:5720674-5721259:-1:exon
so has part: feature:5702087-5702281:-1:exon
so has part: feature:5691129-5691381:-1:exon
so has part: feature:5628851-5628983:-1:exon
so has part: feature:5600222-5600435:-1:exon
so has part: feature:5566091-5566274:-1:exon
so has part: feature:5535702-5535819:-1:exon
so has part: feature:5529704-5529889:-1:exon
so has part: feature:5522282-5522455:-1:exon
so has part: feature:5507543-5507693:-1:exon
so has part: feature:5460877-5461087:-1:exon
so has part: feature:5455630-5455714:-1:exon
so has part: feature:5432814-5432940:-1:exon
so has part: feature:5429159-5429290:-1:exon
so has part: feature:5426496-5426569:-1:exon
so has part: feature:5420803-5421063:-1:exon

XP_048224166.1
type: Protein
SIO_000068: ncbiprotein

position:5420803:-1
position: 5420803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6136195:-1
position: 6136195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6136159-6136195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6001304-6001440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5873175-5873287:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5749195-5749229:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5748700-5748816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5731394-5731566:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5720674-5721259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5702087-5702281:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5691129-5691381:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5628851-5628983:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5600222-5600435:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5566091-5566274:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5535702-5535819:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5529704-5529889:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5522282-5522455:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5507543-5507693:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5460877-5461087:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5455630-5455714:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5432814-5432940:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5429159-5429290:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5426496-5426569:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5420803-5421063:-1:exon

Ctnnd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ctnnd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: catenin delta-2 isoform X1
translation: MFARKPAGAAPLGAMPVPDQPQSASEKTSSLSPGLNTSNGDGSETETTSAILASVKEQELQFERLTRELEAERQIVASQLERCKLGSETGSVSSISSAEEQFHWQSQDGQKDIEDELTTGLELVDSCIRSLQESGILDPQDYSTSERPSLLSQSALQLNSKPEGSFQYPASYHSNQTLALGDTGPTQLPGRSTQARAAGQSFSQGTTSRAAAAAAGHLPGADPAPPPPPPPREPFAPSLGSAFHLPDAPPAAAAAAALYYSSSTLPAPPRGGSPLAAAAPGGSPTKLQRGGSAPEGAAYAAPRGSSPKQSPSRLAKSYSTSSPINIVVSSAGLSPIRVTSPPTVQSTLSSSPIHQLSSTIGTYATLSPTKRLVHAAEPYGKHSQELYATATLQRPGSLAAGSRASYSSQHGHLGPELRALQSPEHHIDPIYEDRVYQKPPMRSLSQSQGDPLPPAHTGTYRTSTAPSSPGVDSAPLQRAGSQHGTQATTAPFQRASYAAGPASNYADPYRQLQYCPSVESPYSKSGPALPPEGTLARSPSIDSIQKDPREFGWRDPELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNKIALKNCGGIPALVRLLRKTTDLEIRELVTGVLWNLSSCDALKMPIIQDALAVLTNAVIIPHSGWENSPLQDDRKIQLHSSQVLRNATGCLRNVSSAGEEARRRMRECDGLTDALLYVIQSALGSSEIDSKTVENCVCILRNLSYRLAAETSQGQHMGTDELDGLLCGEANGKDAESSGCWGKKKKKKKSQDQWDGVGPLPDCAEPPKGIQMLWHPSIVKPYLTLLSECSNPDTLEGAAGALQNLAAGSWKGWAEDVAGMAYALRSLPEGAPCLPQWSVYIRAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMALDVRNKELIGKYAMRDLVHRLPGGNNSNNAASKAMSDDTVTAVCCTLHEVITKNMENAKALRDAGGIEKLVGISKSKGDKHSPKVVKAASQVLNSMWQYRDLRSLYKKDGWSQYHFVASSSTIERDRQRPYSSSRTPSISPVRVSPNNRSASAPASPREMISLKERKTDYESTGSNATYHGTKGEHTSRKDTMTAQNTGISTLYRNSYGAPAEDIKHNQVSAQPAPQEPSRKDYETYQPFPNSTRNYDESFFEDQVHHRPPASEYTMHLGLKSTGNYVDFYSAARPYSELNYETSHYPASPDSWV
SIO_010081: Ctnnd2
subclass of: SO_0000673
so part of: Ctnnd2
location: complement(join(5420803..5421063,5426496..5426569,5429159..5429290,5432814..5432940,5455630..5455714,5460877..5461087,5507543..5507693,5508655..5508729,5522282..5522455,5529704..5529889,5535702..5535819,5566091..5566274,5600222..5600435,5628851..5628983,5691129..5691381,5702087..5702281,5720674..5721259,5731394..5731566,5748700..5748816,5749195..5749229,5873175..5873287,6001304..6001440,6136159..6136195))
location: region:5420803-6136195:-1
so has part: feature:6136159-6136195:-1:exon
so has part: feature:6001304-6001440:-1:exon
so has part: feature:5873175-5873287:-1:exon
so has part: feature:5749195-5749229:-1:exon
so has part: feature:5748700-5748816:-1:exon
so has part: feature:5731394-5731566:-1:exon
so has part: feature:5720674-5721259:-1:exon
so has part: feature:5702087-5702281:-1:exon
so has part: feature:5691129-5691381:-1:exon
so has part: feature:5628851-5628983:-1:exon
so has part: feature:5600222-5600435:-1:exon
so has part: feature:5566091-5566274:-1:exon
so has part: feature:5535702-5535819:-1:exon
so has part: feature:5529704-5529889:-1:exon
so has part: feature:5522282-5522455:-1:exon
so has part: feature:5508655-5508729:-1:exon
so has part: feature:5507543-5507693:-1:exon
so has part: feature:5460877-5461087:-1:exon
so has part: feature:5455630-5455714:-1:exon
so has part: feature:5432814-5432940:-1:exon
so has part: feature:5429159-5429290:-1:exon
so has part: feature:5426496-5426569:-1:exon
so has part: feature:5420803-5421063:-1:exon

XP_048224165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6136159-6136195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6001304-6001440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5873175-5873287:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5749195-5749229:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5748700-5748816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5731394-5731566:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5720674-5721259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5702087-5702281:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5691129-5691381:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5628851-5628983:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5600222-5600435:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5566091-5566274:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5535702-5535819:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5529704-5529889:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5522282-5522455:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5508655-5508729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5507543-5507693:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5460877-5461087:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5455630-5455714:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5432814-5432940:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5429159-5429290:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5426496-5426569:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5420803-5421063:-1:exon

LOC125367517
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367517
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6073862..6074947
location: region:6073862-6074947:1
so has part: feature:6073862-6074947:1:exon

125367517
type: Gene
SIO_000068: ncbigene

position:6073862:1
position: 6073862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6074947:1
position: 6074947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6073862-6074947:1:exon

LOC125367517
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125367517
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC125367517
subclass of: SO_0000673
so part of: LOC125367517
location: 6073862..6074947
location: region:6073862-6074947:1
so has part: feature:6073862-6074947:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6073862-6074947:1:exon

LOC125367530
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6712123..6713079)
location: region:6712123-6713079:-1
so has part: feature:6712123-6713079:-1:exon

125367530
type: Gene
SIO_000068: ncbigene

position:6712123:-1
position: 6712123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6713079:-1
position: 6713079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6712123-6713079:-1:exon

LOC125367530
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125367530
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 48% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC125367530
subclass of: SO_0000673
so part of: LOC125367530
location: complement(6712123..6712274)
location: region:6712123-6712274:-1
so has part: feature:6712123-6712274:-1:exon

position:6712274:-1
position: 6712274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6712123-6712274:-1:exon

LOC125367530
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125367530
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 48% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC125367530
subclass of: SO_0000673
so part of: LOC125367530
location: complement(6712520..6713079)
location: region:6712520-6713079:-1
so has part: feature:6712520-6713079:-1:exon

position:6712520:-1
position: 6712520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6712520-6713079:-1:exon

LOC125367532
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367532
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6956655..6957787
location: region:6956655-6957787:1
so has part: feature:6956655-6957787:1:exon

125367532
type: Gene
SIO_000068: ncbigene

position:6956655:1
position: 6956655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6957787:1
position: 6957787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6956655-6957787:1:exon

LOC125367532
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125367532
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125367532
subclass of: SO_0000673
so part of: LOC125367532
location: 6956655..6957787
location: region:6956655-6957787:1
so has part: feature:6956655-6957787:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6956655-6957787:1:exon

LOC125367533
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367533
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6958264..6974840)
location: region:6958264-6974840:-1
so has part: feature:6958264-6974840:-1:exon
subclass of: SO_0000011

125367533
type: Gene
SIO_000068: ncbigene

position:6958264:-1
position: 6958264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6974840:-1
position: 6974840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6958264-6974840:-1:exon

LOC125367533
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125367533
product: uncharacterized LOC125367533
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007214104.1
SIO_010081: LOC125367533
subclass of: SO_0000673
so part of: LOC125367533
location: complement(join(6958264..6958447,6969237..6969240,6974829..6974840))
location: region:6958264-6974840:-1
so has part: feature:6974829-6974840:-1:exon
so has part: feature:6969237-6969240:-1:exon
so has part: feature:6958264-6958447:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6974829-6974840:-1:exon

position:6974829:-1
position: 6974829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6969237-6969240:-1:exon

position:6969237:-1
position: 6969237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6969240:-1
position: 6969240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6958264-6958447:-1:exon

position:6958447:-1
position: 6958447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dnah5
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Dnah5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6976648..7182173)
location: region:6976648-7182173:-1
so has part: feature:6976648-7182173:-1:exon
subclass of: SO_0000010

125367677
type: Gene
SIO_000068: ncbigene

position:6976648:-1
position: 6976648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7182173:-1
position: 7182173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6976648-7182173:-1:exon

Dnah5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Dnah5
product: dynein axonemal heavy chain 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048368360.1
SIO_010081: Dnah5
subclass of: SO_0000673
so part of: Dnah5
location: complement(join(6976648..6976799,6986098..6986329,6986724..6986876,6987658..6987870,6989749..6989964,6992048..6992251,6993118..6993323,6994846..6995065,6996116..6996361,6998510..6998659,7000305..7000426,7005190..7005380,7005882..7005996,7006930..7007173,7014730..7014912,7015887..7016042,7017432..7017748,7018288..7018423,7022380..7022517,7025901..7026080,7028293..7028496,7031966..7032142,7032387..7032501,7034014..7034245,7038014..7038281,7039115..7039268,7042337..7042467,7044194..7044360,7046684..7046900,7048930..7049153,7050547..7050760,7050962..7051084,7058848..7058982,7059647..7059789,7060428..7060626,7060767..7060943,7062525..7062766,7065661..7065807,7067881..7068034,7070302..7070409,7071449..7071583,7072646..7072840,7073166..7073353,7073894..7074072,7080081..7080253,7081821..7082045,7083157..7083369,7085543..7085699,7088408..7088571,7090123..7090276,7093305..7093504,7095559..7095799,7096659..7096897,7097377..7097439,7098672..7098890,7100043..7100278,7100850..7101051,7105648..7105781,7107837..7107924,7108012..7108202,7108829..7109065,7109746..7109911,7113086..7113231,7117080..7117251,7121236..7121442,7122892..7123213,7123901..7123986,7125152..7125259,7127980..7128195,7128624..7128746,7130895..7131002,7131931..7132044,7133523..7133699,7134618..7134755,7136853..7137074,7137990..7138150,7139892..7139976,7140788..7140922,7182041..7182173))
location: region:6976648-7182173:-1
so has part: feature:7182041-7182173:-1:exon
so has part: feature:7140788-7140922:-1:exon
so has part: feature:7139892-7139976:-1:exon
so has part: feature:7137990-7138150:-1:exon
so has part: feature:7136853-7137074:-1:exon
so has part: feature:7134618-7134755:-1:exon
so has part: feature:7133523-7133699:-1:exon
so has part: feature:7131931-7132044:-1:exon
so has part: feature:7130895-7131002:-1:exon
so has part: feature:7128624-7128746:-1:exon
so has part: feature:7127980-7128195:-1:exon
so has part: feature:7125152-7125259:-1:exon
so has part: feature:7123901-7123986:-1:exon
so has part: feature:7122892-7123213:-1:exon
so has part: feature:7121236-7121442:-1:exon
so has part: feature:7117080-7117251:-1:exon
so has part: feature:7113086-7113231:-1:exon
so has part: feature:7109746-7109911:-1:exon
so has part: feature:7108829-7109065:-1:exon
so has part: feature:7108012-7108202:-1:exon
so has part: feature:7107837-7107924:-1:exon
so has part: feature:7105648-7105781:-1:exon
so has part: feature:7100850-7101051:-1:exon
so has part: feature:7100043-7100278:-1:exon
so has part: feature:7098672-7098890:-1:exon
so has part: feature:7097377-7097439:-1:exon
so has part: feature:7096659-7096897:-1:exon
so has part: feature:7095559-7095799:-1:exon
so has part: feature:7093305-7093504:-1:exon
so has part: feature:7090123-7090276:-1:exon
so has part: feature:7088408-7088571:-1:exon
so has part: feature:7085543-7085699:-1:exon
so has part: feature:7083157-7083369:-1:exon
so has part: feature:7081821-7082045:-1:exon
so has part: feature:7080081-7080253:-1:exon
so has part: feature:7073894-7074072:-1:exon
so has part: feature:7073166-7073353:-1:exon
so has part: feature:7072646-7072840:-1:exon
so has part: feature:7071449-7071583:-1:exon
so has part: feature:7070302-7070409:-1:exon
so has part: feature:7067881-7068034:-1:exon
so has part: feature:7065661-7065807:-1:exon
so has part: feature:7062525-7062766:-1:exon
so has part: feature:7060767-7060943:-1:exon
so has part: feature:7060428-7060626:-1:exon
so has part: feature:7059647-7059789:-1:exon
so has part: feature:7058848-7058982:-1:exon
so has part: feature:7050962-7051084:-1:exon
so has part: feature:7050547-7050760:-1:exon
so has part: feature:7048930-7049153:-1:exon
so has part: feature:7046684-7046900:-1:exon
so has part: feature:7044194-7044360:-1:exon
so has part: feature:7042337-7042467:-1:exon
so has part: feature:7039115-7039268:-1:exon
so has part: feature:7038014-7038281:-1:exon
so has part: feature:7034014-7034245:-1:exon
so has part: feature:7032387-7032501:-1:exon
so has part: feature:7031966-7032142:-1:exon
so has part: feature:7028293-7028496:-1:exon
so has part: feature:7025901-7026080:-1:exon
so has part: feature:7022380-7022517:-1:exon
so has part: feature:7018288-7018423:-1:exon
so has part: feature:7017432-7017748:-1:exon
so has part: feature:7015887-7016042:-1:exon
so has part: feature:7014730-7014912:-1:exon
so has part: feature:7006930-7007173:-1:exon
so has part: feature:7005882-7005996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7182041-7182173:-1:exon

position:7182041:-1
position: 7182041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7140788-7140922:-1:exon

position:7140788:-1
position: 7140788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7140922:-1
position: 7140922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7139892-7139976:-1:exon

position:7139892:-1
position: 7139892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7139976:-1
position: 7139976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7137990-7138150:-1:exon

position:7137990:-1
position: 7137990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7138150:-1
position: 7138150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7136853-7137074:-1:exon

position:7136853:-1
position: 7136853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7137074:-1
position: 7137074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7134618-7134755:-1:exon

position:7134618:-1
position: 7134618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7134755:-1
position: 7134755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7133523-7133699:-1:exon

position:7133523:-1
position: 7133523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7133699:-1
position: 7133699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7131931-7132044:-1:exon

position:7131931:-1
position: 7131931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7132044:-1
position: 7132044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7130895-7131002:-1:exon

position:7130895:-1
position: 7130895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7131002:-1
position: 7131002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7128624-7128746:-1:exon

position:7128624:-1
position: 7128624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7128746:-1
position: 7128746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7127980-7128195:-1:exon

position:7127980:-1
position: 7127980
reference: sequence
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