Perognathus longimembris pacificus isolate PPM17 chromosome 19, ASM2315922v1, whole genome shotgun sequence.
Perognathus longimembris pacificus (Pacific pocket mouse)
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Perognathinae; Perognathus.
REFSEQ INFORMATION: The reference sequence is identical to\nCM041282.1.\nAssembly name: ASM2315922v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the San Diego Zoo Wildlife\nAlliance on 2022/04/27. The original whole-genome shotgun project\nhas the accession JALGBO000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: San Diego Zoo Wildlife Alliance\nAssembly Date :: 2021\nAssembly Method :: Peregrine v. JUNE-2020; HiRise v.\n JULY-2020; Juicer v. DECEMBER-2020;\n Juicebox Assembly Tools v. DECEMBER-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 23.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Perognathus longimembris pacificus\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: histone-lysine N-methyltransferase PRDM9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
leucine-rich repeat-containing protein 14B
COORDINATES: polyA evidence [ECO:0006239]
coiled-coil domain-containing protein 127
succinate dehydrogenase complex flavoprotein subunit A
succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
programmed cell death 6, transcript variant X4
programmed cell death 6, transcript variant X3
programmed cell death 6, transcript variant X2
programmed cell death 6, transcript variant X1
programmed cell death protein 6 isoform X1
programmed cell death protein 6 isoform X2
programmed cell death protein 6 isoform X3
programmed cell death protein 6 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
exocyst complex component 3, transcript variant X1
exocyst complex component 3, transcript variant X2
solute carrier family 9 member A3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
solute carrier family 9 member A3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
solute carrier family 9 member A3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
centrosomal protein 72, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
centrosomal protein 72, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
centrosomal protein of 72 kDa isoform X1
centrosomal protein of 72 kDa isoform X2
tubulin polymerization promoting protein
tubulin polymerization-promoting protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
bromodomain containing 9, transcript variant X8
bromodomain containing 9, transcript variant X7
bromodomain containing 9, transcript variant X6
bromodomain containing 9, transcript variant X5
bromodomain containing 9, transcript variant X2
bromodomain containing 9, transcript variant X3
bromodomain containing 9, transcript variant X4
bromodomain containing 9, transcript variant X1
bromodomain-containing protein 9 isoform X3
bromodomain-containing protein 9 isoform X2
bromodomain-containing protein 9 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
NKD inhibitor of WNT signaling pathway 2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: protein naked cuticle homolog 2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: solute carrier family 12 member 7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
cleft lip and palate transmembrane protein 1-like protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
lysophosphatidylcholine acyltransferase 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
39S ribosomal protein L36, mitochondrial
NADH:ubiquinone oxidoreductase subunit S6
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
iroquois-class homeodomain protein IRX-4-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-4-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00619
iroquois homeobox 2, transcript variant X1
iroquois homeobox 2, transcript variant X2
iroquois-class homeodomain protein IRX-2
pulmonary surfactant-associated protein D-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
iroquois-class homeodomain protein IRX-1
ADAM metallopeptidase with thrombospondin type 1 motif 16
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
A disintegrin and metalloproteinase with thrombospondin motifs 16
interactor of little elongation complex ELL subunit 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
mediator of RNA polymerase II transcription subunit 10
ubiquitin conjugating enzyme E2 Q family like 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
ubiquitin-conjugating enzyme E2Q-like protein 1
RNA cytosine C(5)-methyltransferase NSUN2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: terminal nucleotidyltransferase 4A
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: FAST kinase domain-containing protein 3, mitochondrial
5-methyltetrahydrofolate-homocysteine methyltransferase reductase, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
5-methyltetrahydrofolate-homocysteine methyltransferase reductase, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
5-methyltetrahydrofolate-homocysteine methyltransferase reductase, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: nucleotide motif:Rfam:12.0:RF01156
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
ATP synthase c subunit lysine N-methyltransferase, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
ATP synthase c subunit lysine N-methyltransferase, transcript variant X3
ATP synthase c subunit lysine N-methyltransferase, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
ATP synthase subunit C lysine N-methyltransferase isoform X2
ATP synthase subunit C lysine N-methyltransferase isoform X1
ATP synthase subunit C lysine N-methyltransferase isoform X3
membrane associated ring-CH-type finger 6, transcript variant X1
membrane associated ring-CH-type finger 6, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
E3 ubiquitin-protein ligase MARCHF6 isoform X1
E3 ubiquitin-protein ligase MARCHF6 isoform X2
rhophilin associated tail protein 1 like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ankyrin repeat domain-containing protein 33B
ankyrin repeat domain-containing protein 33B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 48% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
trio Rho guanine nucleotide exchange factor, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
triple functional domain protein isoform X1
trio Rho guanine nucleotide exchange factor, transcript variant X2
triple functional domain protein isoform X2
trio Rho guanine nucleotide exchange factor, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
triple functional domain protein isoform X3
OTU deubiquitinase with linear linkage specificity like
OTU deubiquitinase with linear linkage specificity, transcript variant X2
OTU deubiquitinase with linear linkage specificity, transcript variant X1
ANKH inorganic pyrophosphate transport regulator
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
F-box and leucine rich repeat protein 7, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
F-box and leucine rich repeat protein 7, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
membrane associated ring-CH-type finger 11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
reticulophagy regulator 1, transcript variant X1
reticulophagy regulator 1, transcript variant X2
brain abundant membrane attached signal protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
brain abundant membrane attached signal protein 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
brain abundant membrane attached signal protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: nucleotide motif:Rfam:12.0:RF00026
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
ATP synthase subunit gamma, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
COORDINATES: nucleotide motif:Rfam:12.0:RF00432
chromosome 19 C5orf22 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
UPF0489 protein C5orf22 homolog isoform X1
chromosome 19 C5orf22 homolog, transcript variant X2
UPF0489 protein C5orf22 homolog isoform X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: PDZ domain-containing protein 2
golgi phosphoprotein 3, transcript variant X1
golgi phosphoprotein 3, transcript variant X2
myotubularin related protein 12, transcript variant X1
myotubularin related protein 12, transcript variant X2
myotubularin-related protein 12 isoform X1
myotubularin-related protein 12 isoform X2
zinc finger RNA binding protein, transcript variant X2
zinc finger RNA binding protein, transcript variant X1
zinc finger RNA-binding protein isoform X2
zinc finger RNA-binding protein isoform X1
endoplasmic reticulum-Golgi intermediate compartment protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
SUB1 regulator of transcription, transcript variant X2
SUB1 regulator of transcription, transcript variant X1
activated RNA polymerase II transcriptional coactivator p15 isoform X1
activated RNA polymerase II transcriptional coactivator p15 isoform X2
natriuretic peptide receptor 3, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
natriuretic peptide receptor 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
natriuretic peptide receptor 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
natriuretic peptide receptor 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
atrial natriuretic peptide receptor 3 isoform X4
atrial natriuretic peptide receptor 3 isoform X3
atrial natriuretic peptide receptor 3 isoform X2
atrial natriuretic peptide receptor 3 isoform X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: oxidation resistance protein 1-like
ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
A disintegrin and metalloproteinase with thrombospondin motifs 12 isoform X1
ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
A disintegrin and metalloproteinase with thrombospondin motifs 12 isoform X2
ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X4
A disintegrin and metalloproteinase with thrombospondin motifs 12 isoform X3
solute carrier family 45 member 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
solute carrier family 45 member 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
membrane-associated transporter protein isoform X1
membrane-associated transporter protein isoform X2
C1q and TNF related 3, transcript variant X1
C1q and TNF related 3, transcript variant X2
complement C1q tumor necrosis factor-related protein 3 isoform X2
complement C1q tumor necrosis factor-related protein 3 isoform X1
COORDINATES: nucleotide motif:Rfam:12.0:RF00302
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
retinoic acid induced 14, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
retinoic acid induced 14, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
retinoic acid induced 14, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
retinoic acid induced 14, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
retinoic acid induced 14, transcript variant X4
retinoic acid induced 14, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
tetratricopeptide repeat protein 23-like
ribosome biogenesis protein BRX1 homolog
DnaJ heat shock protein family (Hsp40) member C21
alanine--glyoxylate aminotransferase 2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
alanine--glyoxylate aminotransferase 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
alanine--glyoxylate aminotransferase 2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
alanine--glyoxylate aminotransferase 2, transcript variant X1
alanine--glyoxylate aminotransferase 2, transcript variant X5
alanine--glyoxylate aminotransferase 2, transcript variant X6
alanine--glyoxylate aminotransferase 2, mitochondrial isoform X4
alanine--glyoxylate aminotransferase 2, mitochondrial isoform X2
alanine--glyoxylate aminotransferase 2, mitochondrial isoform X3
alanine--glyoxylate aminotransferase 2, mitochondrial isoform X1
alanine--glyoxylate aminotransferase 2, mitochondrial isoform X5
alanine--glyoxylate aminotransferase 2, mitochondrial isoform X6
prolactin receptor, transcript variant X1
prolactin receptor, transcript variant X2
prolactin receptor, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
eukaryotic translation initiation factor 4E-binding protein 1
calcyphosine like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
calcyphosine like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
UDP glycosyltransferase family 3 member A1, transcript variant X3
UDP glycosyltransferase family 3 member A1, transcript variant X1
UDP glycosyltransferase family 3 member A1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
UDP-glucuronosyltransferase 3A1 isoform X3
UDP-glucuronosyltransferase 3A1 isoform X1
UDP-glucuronosyltransferase 3A1 isoform X2
LMBR1 domain containing 2, transcript variant X1
LMBR1 domain containing 2, transcript variant X2
G-protein coupled receptor-associated protein LMBRD2
S-phase kinase associated protein 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
S-phase kinase associated protein 2, transcript variant X3
S-phase kinase associated protein 2, transcript variant X1
S-phase kinase-associated protein 2 isoform X1
S-phase kinase-associated protein 2 isoform X2
S-phase kinase associated protein 2, transcript variant X4
S-phase kinase-associated protein 2 isoform X3
NAD kinase 2, mitochondrial, transcript variant X1
NAD kinase 2, mitochondrial, transcript variant X2
NAD kinase 2, mitochondrial, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
RAN binding protein 3 like, transcript variant X3
RAN binding protein 3 like, transcript variant X2
RAN binding protein 3 like, transcript variant X4
RAN binding protein 3 like, transcript variant X1
solute carrier family 1 member 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
excitatory amino acid transporter 1 isoform X1
solute carrier family 1 member 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
excitatory amino acid transporter 1 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
NIPBL cohesin loading factor, transcript variant X1
NIPBL cohesin loading factor, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-like
ciliogenesis and planar polarity effector 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60% coverage of the annotated genomic feature by RNAseq alignments
ciliogenesis and planar polarity effector complex subunit 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
ciliogenesis and planar polarity effector 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
glial cell line-derived neurotrophic factor
EGF like, fibronectin type III and laminin G domains, transcript variant X1
EGF like, fibronectin type III and laminin G domains, transcript variant X2
EGF like, fibronectin type III and laminin G domains, transcript variant X3
LIF receptor subunit alpha, transcript variant X4
LIF receptor subunit alpha, transcript variant X2
LIF receptor subunit alpha, transcript variant X3
LIF receptor subunit alpha, transcript variant X1
leukemia inhibitory factor receptor isoform X4
leukemia inhibitory factor receptor isoform X2
leukemia inhibitory factor receptor isoform X3
leukemia inhibitory factor receptor isoform X1
oncostatin M receptor, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
oncostatin M receptor, transcript variant X2
oncostatin M receptor, transcript variant X3
oncostatin-M-specific receptor subunit beta isoform X1
oncostatin-M-specific receptor subunit beta isoform X2
oncostatin-M-specific receptor subunit beta isoform X3
RPTOR independent companion of MTOR complex 2, transcript variant X2
RPTOR independent companion of MTOR complex 2, transcript variant X1
rapamycin-insensitive companion of mTOR isoform X2
rapamycin-insensitive companion of mTOR isoform X1
FYN binding protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
FYN binding protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
DAB adaptor protein 2, transcript variant X1
DAB adaptor protein 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
tetratricopeptide repeat domain 33, transcript variant X1
tetratricopeptide repeat domain 33, transcript variant X2
tetratricopeptide repeat protein 33 isoform X1
tetratricopeptide repeat protein 33 isoform X2
protein kinase AMP-activated catalytic subunit alpha 1, transcript variant X1
protein kinase AMP-activated catalytic subunit alpha 1, transcript variant X3
protein kinase AMP-activated catalytic subunit alpha 1, transcript variant X2
5'-AMP-activated protein kinase catalytic subunit alpha-1 isoform X1
5'-AMP-activated protein kinase catalytic subunit alpha-1 isoform X3
5'-AMP-activated protein kinase catalytic subunit alpha-1 isoform X2
COORDINATES: nucleotide motif:Rfam:12.0:RF00577
caspase recruitment domain family member 6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
LOW QUALITY PROTEIN: caspase recruitment domain-containing protein 6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 20% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
maestro heat like repeat family member 2B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
maestro heat-like repeat-containing protein family member 2B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
phosphatidylinositol specific phospholipase C X domain containing 3
succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial
RAB7A interacting MON1-CCZ1 complex subunit 1
RAB7A-interacting MON1-CCZ1 complex subunit 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
growth hormone receptor, transcript variant X1
growth hormone receptor, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
coiled-coil domain-containing protein 152
zinc finger protein 131, transcript variant X2
zinc finger protein 131, transcript variant X4
zinc finger protein 131, transcript variant X6
zinc finger protein 131, transcript variant X5
zinc finger protein 131, transcript variant X3
zinc finger protein 131, transcript variant X1
zinc finger protein 131, transcript variant X7
zinc finger protein 131, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
3-hydroxy-3-methylglutaryl-CoA synthase 1, transcript variant X1
3-hydroxy-3-methylglutaryl-CoA synthase 1, transcript variant X2
hydroxymethylglutaryl-CoA synthase, cytoplasmic
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
poly(A) binding protein interacting protein 1, transcript variant X3
poly(A) binding protein interacting protein 1, transcript variant X2
poly(A) binding protein interacting protein 1, transcript variant X1
polyadenylate-binding protein-interacting protein 1 isoform X2
polyadenylate-binding protein-interacting protein 1 isoform X1
polyadenylate-binding protein-interacting protein 1 isoform X3
nicotinamide nucleotide transhydrogenase, transcript variant X1
nicotinamide nucleotide transhydrogenase, transcript variant X3
nicotinamide nucleotide transhydrogenase, transcript variant X2
nicotinamide nucleotide transhydrogenase, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
39S ribosomal protein S30, mitochondrial
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
LOW QUALITY PROTEIN: 5-hydroxytryptamine receptor 5B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: nucleotide motif:Rfam:12.0:RF00561
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
molybdopterin synthase catalytic subunit
pelota mRNA surveillance and ribosome rescue factor
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
ISL LIM homeobox 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 5 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
ISL LIM homeobox 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
insulin gene enhancer protein ISL-1 isoform X2
insulin gene enhancer protein ISL-1 isoform X1
poly(ADP-ribose) polymerase family member 8
protein mono-ADP-ribosyltransferase PARP8
hyperpolarization activated cyclic nucleotide gated potassium channel 1
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
LOW QUALITY PROTEIN: deleted in azoospermia-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
NADH:ubiquinone oxidoreductase subunit S4
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
heat shock protein family B (small) member 3
chondroitin sulfate proteoglycan 4, transcript variant X2
chondroitin sulfate proteoglycan 4, transcript variant X3
chondroitin sulfate proteoglycan 4, transcript variant X1
chondroitin sulfate proteoglycan 4 isoform X2
chondroitin sulfate proteoglycan 4 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
protein tyrosine phosphatase type IVA 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
cell division cycle protein 20 homolog B
glycine cleavage system H protein, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
glutathione peroxidase 8 (putative), transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments
glutathione peroxidase 8 (putative), transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
glutathione peroxidase 8 (putative), transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
probable glutathione peroxidase 8 isoform X1
probable glutathione peroxidase 8 isoform X2
probable glutathione peroxidase 8 isoform X3
multiciliate differentiation and DNA synthesis associated cell cycle protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
DExH-box helicase 29, transcript variant X1
DExH-box helicase 29, transcript variant X2
ATP-dependent RNA helicase DHX29 isoform X1
ATP-dependent RNA helicase DHX29 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
phospholipid phosphatase 1, transcript variant X1
phospholipid phosphatase 1, transcript variant X4
phospholipid phosphatase 1, transcript variant X2
phospholipid phosphatase 1, transcript variant X3
solute carrier family 38 member 9, transcript variant X1
solute carrier family 38 member 9, transcript variant X2
solute carrier family 38 member 9, transcript variant X4
solute carrier family 38 member 9, transcript variant X3
sodium-coupled neutral amino acid transporter 9 isoform X1
sodium-coupled neutral amino acid transporter 9 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
probable ATP-dependent RNA helicase DDX4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: interleukin-31 receptor subunit alpha
interleukin 6 cytokine family signal transducer, transcript variant X1
interleukin 6 cytokine family signal transducer, transcript variant X2
interleukin-6 receptor subunit beta isoform X1
interleukin-6 receptor subunit beta isoform X2
ankyrin repeat domain 55, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
ankyrin repeat domain 55, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
ankyrin repeat domain-containing protein 55 isoform X1
ankyrin repeat domain-containing protein 55 isoform X2
ankyrin repeat domain 55, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
ankyrin repeat domain-containing protein 55 isoform X3
PEST proteolytic signal-containing nuclear protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
mitogen-activated protein kinase kinase kinase 1, transcript variant X1
mitogen-activated protein kinase kinase kinase 1 isoform X1
mitogen-activated protein kinase kinase kinase 1, transcript variant X2
mitogen-activated protein kinase kinase kinase 1 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
MIER family member 3, transcript variant X2
MIER family member 3, transcript variant X1
MIER family member 3, transcript variant X5
MIER family member 3, transcript variant X4
MIER family member 3, transcript variant X3
mesoderm induction early response protein 3 isoform X2
mesoderm induction early response protein 3 isoform X1
mesoderm induction early response protein 3 isoform X4
mesoderm induction early response protein 3 isoform X3
mesoderm induction early response protein 3 isoform X5
GC-rich promoter binding protein 1, transcript variant X3
GC-rich promoter binding protein 1, transcript variant X2
GC-rich promoter binding protein 1, transcript variant X1
GC-rich promoter binding protein 1, transcript variant X4
GC-rich promoter binding protein 1, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
GC-rich promoter binding protein 1, transcript variant X6
actin beta like 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
actin beta like 2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
actin beta like 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 343 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
GRB2 binding adaptor protein, transmembrane
RAB3C, member RAS oncogene family, transcript variant X2
RAB3C, member RAS oncogene family, transcript variant X1
phosphodiesterase 4D, transcript variant X1
phosphodiesterase 4D, transcript variant X2
phosphodiesterase 4D, transcript variant X4
phosphodiesterase 4D, transcript variant X3
phosphodiesterase 4D, transcript variant X6
phosphodiesterase 4D, transcript variant X5
phosphodiesterase 4D, transcript variant X7
phosphodiesterase 4D, transcript variant X8
cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X1
cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X2
cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X3
cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X4
cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X5
cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X6
uncharacterized LOC125367632, transcript variant X1
uncharacterized LOC125367632, transcript variant X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: DNA cross-link repair 1A protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
elongation of very long chain fatty acids protein 7
ERCC excision repair 8, CSA ubiquitin ligase complex subunit, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
ERCC excision repair 8, CSA ubiquitin ligase complex subunit, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
ERCC excision repair 8, CSA ubiquitin ligase complex subunit, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
DNA excision repair protein ERCC-8 isoform X1
DNA excision repair protein ERCC-8 isoform X2
DNA excision repair protein ERCC-8 isoform X3
NADH:ubiquinone oxidoreductase complex assembly factor 2
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2
small integral membrane protein 15, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
small integral membrane protein 15, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
small integral membrane protein 15, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
zinc finger SWIM domain-containing protein 6
kinesin family member 2A, transcript variant X3
kinesin family member 2A, transcript variant X4
kinesin family member 2A, transcript variant X1
kinesin family member 2A, transcript variant X2
DIM1 rRNA methyltransferase and ribosome maturation factor
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
leucine-rich repeat-containing protein 70
COORDINATES: nucleotide motif:Rfam:12.0:RF00004
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
mannosylglucosyl-3-phosphoglycerate phosphatase-like
regulator of G protein signaling 7 binding protein, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
regulator of G protein signaling 7 binding protein, transcript variant X1
regulator of G protein signaling 7 binding protein, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
regulator of G-protein signaling 7-binding protein isoform X1
regulator of G-protein signaling 7-binding protein isoform X3
regulator of G protein signaling 7 binding protein, transcript variant X3
regulator of G-protein signaling 7-binding protein isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
CWC27 spliceosome associated cyclophilin, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
CWC27 spliceosome associated cyclophilin, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
spliceosome-associated protein CWC27 homolog
COORDINATES: nucleotide motif:Rfam:12.0:RF00015
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
ADAM metallopeptidase with thrombospondin type 1 motif 6, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ADAM metallopeptidase with thrombospondin type 1 motif 6, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ADAM metallopeptidase with thrombospondin type 1 motif 6, transcript variant X1
A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X2
A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X1
peptidylprolyl isomerase domain and WD repeat containing 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X1
peptidylprolyl isomerase domain and WD repeat containing 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X2
corticotropin releasing hormone binding protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
corticotropin-releasing factor-binding protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
IQ motif containing GTPase activating protein 2
ras GTPase-activating-like protein IQGAP2
coagulation factor II thrombin receptor like 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: proteinase-activated receptor 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
POC5 centriolar protein, transcript variant X2
POC5 centriolar protein, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
ankyrin repeat and death domain containing 1B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 89% coverage of the annotated genomic feature by RNAseq alignments
ankyrin repeat and death domain-containing protein 1B
DNA polymerase kappa, transcript variant X3
DNA polymerase kappa, transcript variant X5
DNA polymerase kappa, transcript variant X1
DNA polymerase kappa, transcript variant X4
DNA polymerase kappa, transcript variant X2
DNA polymerase kappa, transcript variant X6
ceramide transporter 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
ceramide transporter 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
3-hydroxy-3-methylglutaryl-CoA reductase
3-hydroxy-3-methylglutaryl-Coenzyme A reductase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
ankyrin repeat domain-containing protein 31
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4
family with sequence similarity 169 member A, transcript variant X1
family with sequence similarity 169 member A, transcript variant X2
soluble lamin-associated protein of 75 kDa isoform X1
soluble lamin-associated protein of 75 kDa isoform X2
NSA2 ribosome biogenesis factor, transcript variant X2
NSA2 ribosome biogenesis factor, transcript variant X1
ribosome biogenesis protein NSA2 homolog
GTP dependent ribosome recycling factor mitochondrial 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
ribosome-releasing factor 2, mitochondrial isoform X1
GTP dependent ribosome recycling factor mitochondrial 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
ribosome-releasing factor 2, mitochondrial isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
Rho guanine nucleotide exchange factor 28, transcript variant X1
Rho guanine nucleotide exchange factor 28, transcript variant X2
rho guanine nucleotide exchange factor 28 isoform X1
rho guanine nucleotide exchange factor 28 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
UTP15 small subunit processome component, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
UTP15 small subunit processome component, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
U3 small nucleolar RNA-associated protein 15 homolog
ankyrin repeat family A member 2, transcript variant X1
ankyrin repeat family A member 2, transcript variant X2
ankyrin repeat family A protein 2 isoform X1
ankyrin repeat family A member 2, transcript variant X3
ankyrin repeat family A protein 2 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 23% coverage of the annotated genomic feature by RNAseq alignments
basic transcription factor 3, transcript variant X2
basic transcription factor 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: transmembrane protein 171
FCH and mu domain containing endocytic adaptor 2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: F-BAR domain only protein 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
pentatricopeptide repeat-containing protein 2, mitochondrial
28S ribosomal protein S27, mitochondrial
LOW QUALITY PROTEIN: microtubule-associated protein 1B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
cocaine- and amphetamine-regulated transcript protein
methylcrotonyl-CoA carboxylase subunit 2
methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
transcription factor TFIIIB component B'' homolog
general transcription factor IIH subunit 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
general transcription factor IIH subunit 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
general transcription factor IIH subunit 2 isoform X1
general transcription factor IIH subunit 2 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
RAD17 checkpoint clamp loader component, transcript variant X2
RAD17 checkpoint clamp loader component, transcript variant X3
RAD17 checkpoint clamp loader component, transcript variant X1
TATA-box binding protein associated factor 9
transcription initiation factor TFIID subunit 9
coiled-coil domain containing 125, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
coiled-coil domain containing 125, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
coiled-coil domain-containing protein 125 isoform X1
coiled-coil domain-containing protein 125 isoform X2
cyclin dependent kinase 7, transcript variant X1
cyclin dependent kinase 7, transcript variant X2
alpha-ketoglutarate dehydrogenase component 4
phosphoinositide-3-kinase regulatory subunit 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
phosphoinositide-3-kinase regulatory subunit 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
phosphoinositide-3-kinase regulatory subunit 1, transcript variant X1
phosphoinositide-3-kinase regulatory subunit 1, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
phosphoinositide-3-kinase regulatory subunit 1, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1
phosphatidylinositol 3-kinase regulatory subunit alpha isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 76% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
microtubule-associated serine/threonine-protein kinase 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X1
splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X3
splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X2
splicing regulatory glutamine/lysine-rich protein 1 isoform X1
splicing regulatory glutamine/lysine-rich protein 1 isoform X2
erbb2 interacting protein, transcript variant X6
erbb2 interacting protein, transcript variant X2
erbb2 interacting protein, transcript variant X1
erbb2 interacting protein, transcript variant X5
erbb2 interacting protein, transcript variant X7
erbb2 interacting protein, transcript variant X3
erbb2 interacting protein, transcript variant X4
erbb2 interacting protein, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
small glutamine rich tetratricopeptide repeat co-chaperone beta, transcript variant X1
small glutamine rich tetratricopeptide repeat co-chaperone beta, transcript variant X2
small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1
small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
trafficking protein particle complex subunit 13, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
trafficking protein particle complex subunit 13, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
trafficking protein particle complex subunit 13, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
trafficking protein particle complex subunit 13, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
trafficking protein particle complex subunit 13 isoform X3
trafficking protein particle complex subunit 13 isoform X2
trafficking protein particle complex subunit 13 isoform X1
trafficking protein particle complex subunit 13 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
bromodomain containing 8, transcript variant X1
bromodomain containing 8, transcript variant X4
bromodomain-containing protein 8 isoform X1
bromodomain-containing protein 8 isoform X3
bromodomain containing 8, transcript variant X2
bromodomain containing 8, transcript variant X3
bromodomain-containing protein 8 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
bromodomain-containing protein 8-like, transcript variant X1
bromodomain-containing protein 8-like, transcript variant X2
bromodomain-containing protein 8-like isoform X1
bromodomain-containing protein 8-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
family with sequence similarity 13 member B, transcript variant X1
family with sequence similarity 13 member B, transcript variant X2
family with sequence similarity 13 member B, transcript variant X4
family with sequence similarity 13 member B, transcript variant X5
family with sequence similarity 13 member B, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
polycystin 2 like 2, transient receptor potential cation channel, transcript variant X4
polycystin 2 like 2, transient receptor potential cation channel, transcript variant X2
polycystin 2 like 2, transient receptor potential cation channel, transcript variant X5
polycystin 2 like 2, transient receptor potential cation channel, transcript variant X3
polycystin 2 like 2, transient receptor potential cation channel, transcript variant X1
polycystic kidney disease 2-like 2 protein isoform X4
polycystic kidney disease 2-like 2 protein isoform X2
polycystic kidney disease 2-like 2 protein isoform X5
polycystic kidney disease 2-like 2 protein isoform X3
polycystic kidney disease 2-like 2 protein isoform X1
COORDINATES: nucleotide motif:Rfam:12.0:RF00156
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns