Perognathus longimembris pacificus isolate PPM17 chromosome 18, ASM2315922v1, whole genome shotgun sequence.
type: Entry
definition: Perognathus longimembris pacificus isolate PPM17 chromosome 18, ASM2315922v1, whole genome shotgun sequence.
sequence version: NC_063178.1
sequence date: 2022-05-19
sequence: sequence
division: CON
label: NC_063178.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA837248
dblink: SAMN26876106
keyword: WGS
keyword: RefSeq
source: Perognathus longimembris pacificus (Pacific pocket mouse)
organism: Perognathus longimembris pacificus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Perognathinae; Perognathus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM041281.1.\nAssembly name: ASM2315922v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the San Diego Zoo Wildlife\nAlliance on 2022/04/27. The original whole-genome shotgun project\nhas the accession JALGBO000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: San Diego Zoo Wildlife Alliance\nAssembly Date :: 2021\nAssembly Method :: Peregrine v. JUNE-2020; HiRise v.\n JULY-2020; Juicer v. DECEMBER-2020;\n Juicebox Assembly Tools v. DECEMBER-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 23.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Perognathus longimembris pacificus\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 54053379
topology: linear
so has quality: SO_0000987
location: 1..54053379
location: region:1-54053379:1
RO_0002162: 214514

NC_063178
type: RefSeq
SIO_000068: refseq

PRJNA837248
type: BioProject
SIO_000068: bioproject

SAMN26876106
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54053379:1
position: 54053379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-54053379:1:source
so part of: sequence
organism: Perognathus longimembris pacificus
mol type: genomic DNA
isolate: PPM17
sub species: pacificus
chromosome: 18
sex: male
cell line: 21356
cell type: fibroblast
tissue type: trachea
dev stage: adult
country: USA: Santa Margarita
collection date: 2019
collected by: SDZWA

214514
type: Taxonomy
SIO_000068: taxonomy

LOC125367162
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(62250..72029)
location: region:62250-72029:-1
so has part: feature:62250-72029:-1:exon
subclass of: SO_0000010

125367162
type: Gene
SIO_000068: ncbigene

position:62250:-1
position: 62250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72029:-1
position: 72029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62250-72029:-1:exon

LOC125367162
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125367162
product: zinc finger protein 709-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048367789.1
SIO_010081: LOC125367162
subclass of: SO_0000673
so part of: LOC125367162
location: complement(join(62250..64909,65444..65504,65688..65814,71893..72029))
location: region:62250-72029:-1
so has part: feature:71893-72029:-1:exon
so has part: feature:65688-65814:-1:exon
so has part: feature:65444-65504:-1:exon
so has part: feature:62250-64909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71893-72029:-1:exon

position:71893:-1
position: 71893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65688-65814:-1:exon

position:65688:-1
position: 65688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65814:-1
position: 65814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:65444-65504:-1:exon

position:65444:-1
position: 65444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65504:-1
position: 65504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:62250-64909:-1:exon

position:64909:-1
position: 64909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125367162
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125367162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 709-like
translation: MDSVTFEDVAVNFTQEEWALLDPSQKNFYRDVMLETFSNLASVGNKWRVQNISDQPKNPGRSLSHTISHSGYKPYVHEEYGEKLYKCEKCEKTLMSLTSVQGLEASHNVNGPYECKVCFKAFDFLRPFRVHQQTHSAKFHSIKNPYDCKQSAETFVCCSSFQIHGRIYTVEKSYECKQCGKAFRHFSYLQVHKRTHNEEKPYKCKQCRKAFKDHSSLHVHERSHSGEKPYECKQCGKNFRFVGHFQAHQRRHTGEKFYECKQCGKAIKHLSYLQIHERMHTEGKPYECKQCGKMLSSTSSLKLHERTHTREKPCECKQCGKILSSSKSLQRHEKIHTRDRPHECKQCHKAFRDHSSLQVHERIHTGEKPYECKQCGKHFRYLGHFRVHQRRHTGEKPYVCKQCGKAFSDHSCFRRHEKTHTVEKPYQCEQCFKVFKYHLSLRRHERTHTGEKPYECKECGKAFRDHSSLQVHERVHTGEKPYECKQCGKAFRYLNYLQVHERTHTGEKPYECKQCGKAFMCLGYLRVHENTHTGEKPYQCKQCFKVFKYHLSVRRHERTHTGEKPYECKYCGKAFRYHSSLQVHERIHTGEKPYKCKQCGKAFRYLNYLQVHERTHTGVKPNITVNSMEKPSEIYYL
SIO_010081: LOC125367162
subclass of: SO_0000673
so part of: LOC125367162
location: complement(join(63187..64909,65444..65504,65688..65814,71893..71895))
location: region:63187-71895:-1
so has part: feature:71893-71895:-1:exon
so has part: feature:65688-65814:-1:exon
so has part: feature:65444-65504:-1:exon
so has part: feature:63187-64909:-1:exon

XP_048223746.1
type: Protein
SIO_000068: ncbiprotein

position:63187:-1
position: 63187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71895:-1
position: 71895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71893-71895:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65688-65814:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65444-65504:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63187-64909:-1:exon

Rhou
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Rhou
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 92787..100760
location: region:92787-100760:1
so has part: feature:92787-100760:1:exon
subclass of: SO_0000010

125367171
type: Gene
SIO_000068: ncbigene

position:92787:1
position: 92787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100760:1
position: 100760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92787-100760:1:exon

Rhou
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rhou
product: ras homolog family member U
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367798.1
SIO_010081: Rhou
subclass of: SO_0000673
so part of: Rhou
location: join(92787..93042,94226..94284,97302..98819,99156..100760)
location: region:92787-100760:1
so has part: feature:92787-93042:1:exon
so has part: feature:94226-94284:1:exon
so has part: feature:97302-98819:1:exon
so has part: feature:99156-100760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92787-93042:1:exon

position:93042:1
position: 93042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94226-94284:1:exon

position:94226:1
position: 94226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94284:1
position: 94284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:97302-98819:1:exon

position:97302:1
position: 97302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98819:1
position: 98819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:99156-100760:1:exon

position:99156:1
position: 99156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rhou
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rhou
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoU
translation: MAPQQGRPSLRARGEPPPAPPVPPRRARGGRGAAGGRGRAGGAEARGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDRLRPLCYTNADIFLLCFSVVSPASFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQHSDSQQQPKKCKSRTPDKVRDLSKSWWRKYCCLA
SIO_010081: Rhou
subclass of: SO_0000673
so part of: Rhou
location: join(92787..93042,94226..94284,97302..97757)
location: region:92787-97757:1
so has part: feature:92787-93042:1:exon
so has part: feature:94226-94284:1:exon
so has part: feature:97302-97757:1:exon

XP_048223755.1
type: Protein
SIO_000068: ncbiprotein

position:97757:1
position: 97757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92787-93042:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94226-94284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97302-97757:1:exon

Rab4a
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Rab4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 154411..170745
location: region:154411-170745:1
so has part: feature:154411-170745:1:exon
subclass of: SO_0000010

125366851
type: Gene
SIO_000068: ncbigene

position:154411:1
position: 154411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170745:1
position: 170745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154411-170745:1:exon

Rab4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rab4a
product: RAB4A, member RAS oncogene family, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367574.1
SIO_010081: Rab4a
subclass of: SO_0000673
so part of: Rab4a
location: join(154411..154589,161732..161944,162700..162780,163060..163174,164380..164442,165777..165931,166617..166712,169576..169706,170063..170745)
location: region:154411-170745:1
so has part: feature:154411-154589:1:exon
so has part: feature:161732-161944:1:exon
so has part: feature:162700-162780:1:exon
so has part: feature:163060-163174:1:exon
so has part: feature:164380-164442:1:exon
so has part: feature:165777-165931:1:exon
so has part: feature:166617-166712:1:exon
so has part: feature:169576-169706:1:exon
so has part: feature:170063-170745:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:154411-154589:1:exon

position:154589:1
position: 154589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161732-161944:1:exon

position:161732:1
position: 161732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161944:1
position: 161944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:162700-162780:1:exon

position:162700:1
position: 162700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162780:1
position: 162780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:163060-163174:1:exon

position:163060:1
position: 163060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163174:1
position: 163174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:164380-164442:1:exon

position:164380:1
position: 164380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164442:1
position: 164442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:165777-165931:1:exon

position:165777:1
position: 165777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165931:1
position: 165931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:166617-166712:1:exon

position:166617:1
position: 166617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166712:1
position: 166712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:169576-169706:1:exon

position:169576:1
position: 169576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169706:1
position: 169706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:170063-170745:1:exon

position:170063:1
position: 170063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rab4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rab4a
product: RAB4A, member RAS oncogene family, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367575.1
SIO_010081: Rab4a
subclass of: SO_0000673
so part of: Rab4a
location: join(154416..154589,162700..162780,163060..163174,164380..164442,165777..165931,166617..166712,169576..169706,170063..170745)
location: region:154416-170745:1
so has part: feature:154416-154589:1:exon
so has part: feature:162700-162780:1:exon
so has part: feature:163060-163174:1:exon
so has part: feature:164380-164442:1:exon
so has part: feature:165777-165931:1:exon
so has part: feature:166617-166712:1:exon
so has part: feature:169576-169706:1:exon
so has part: feature:170063-170745:1:exon

position:154416:1
position: 154416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154416-154589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162700-162780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163060-163174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164380-164442:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165777-165931:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:166617-166712:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169576-169706:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170063-170745:1:exon

Rab4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rab4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-4A isoform X1
translation: MAQTAMSETYERKARAGEPQSDLGNYLEMMLPGVSRAELPQPQEARQPGAIGGRSRDEHPHSYFRGERARVCCSQNTQRSLDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQSIVIILCGNKKDLDGDREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERMGSGIQYGDAALRQLRSPRRTQAPSAQECGC
SIO_010081: Rab4a
subclass of: SO_0000673
so part of: Rab4a
location: join(154559..154589,161732..161944,162700..162780,163060..163174,164380..164442,165777..165931,166617..166712,169576..169691)
location: region:154559-169691:1
so has part: feature:154559-154589:1:exon
so has part: feature:161732-161944:1:exon
so has part: feature:162700-162780:1:exon
so has part: feature:163060-163174:1:exon
so has part: feature:164380-164442:1:exon
so has part: feature:165777-165931:1:exon
so has part: feature:166617-166712:1:exon
so has part: feature:169576-169691:1:exon

XP_048223531.1
type: Protein
SIO_000068: ncbiprotein

position:154559:1
position: 154559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169691:1
position: 169691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154559-154589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161732-161944:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162700-162780:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:163060-163174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:164380-164442:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165777-165931:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:166617-166712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169576-169691:1:exon

Rab4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rab4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-4A isoform X2
translation: MAQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQSIVIILCGNKKDLDGDREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERMGSGIQYGDAALRQLRSPRRTQAPSAQECGC
SIO_010081: Rab4a
subclass of: SO_0000673
so part of: Rab4a
location: join(154559..154589,162700..162780,163060..163174,164380..164442,165777..165931,166617..166712,169576..169691)
location: region:154559-169691:1
so has part: feature:154559-154589:1:exon
so has part: feature:162700-162780:1:exon
so has part: feature:163060-163174:1:exon
so has part: feature:164380-164442:1:exon
so has part: feature:165777-165931:1:exon
so has part: feature:166617-166712:1:exon
so has part: feature:169576-169691:1:exon

XP_048223532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154559-154589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162700-162780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163060-163174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164380-164442:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165777-165931:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:166617-166712:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169576-169691:1:exon

LOC125366852
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125366852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(164483..186302)
location: region:164483-186302:-1
so has part: feature:164483-186302:-1:exon
subclass of: SO_0000010

125366852
type: Gene
SIO_000068: ncbigene

position:164483:-1
position: 164483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186302:-1
position: 186302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164483-186302:-1:exon

LOC125366852
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125366852
product: centriole, cilia and spindle associated protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048367577.1
SIO_010081: LOC125366852
subclass of: SO_0000673
so part of: LOC125366852
location: complement(join(164483..164492,181509..181836,185873..186302))
location: region:164483-186302:-1
so has part: feature:185873-186302:-1:exon
so has part: feature:181509-181836:-1:exon
so has part: feature:164483-164492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185873-186302:-1:exon

position:185873:-1
position: 185873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181509-181836:-1:exon

position:181509:-1
position: 181509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181836:-1
position: 181836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:164483-164492:-1:exon

position:164492:-1
position: 164492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125366852
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125366852
product: centriole, cilia and spindle associated protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048367576.1
SIO_010081: LOC125366852
subclass of: SO_0000673
so part of: LOC125366852
location: complement(join(177808..179019,179075..180231,181565..181836,185873..186302))
location: region:177808-186302:-1
so has part: feature:185873-186302:-1:exon
so has part: feature:181565-181836:-1:exon
so has part: feature:179075-180231:-1:exon
so has part: feature:177808-179019:-1:exon

position:177808:-1
position: 177808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185873-186302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181565-181836:-1:exon

position:181565:-1
position: 181565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:179075-180231:-1:exon

position:179075:-1
position: 179075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180231:-1
position: 180231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:177808-179019:-1:exon

position:179019:-1
position: 179019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125366852
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125366852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriole, cilia and spindle-associated protein isoform X1
translation: MSPGSGVKSEYMKRYREPRWDEFAACYRELRRYRLGRRLLEQAHAPWLWDAWGPDGASDSSASSSPAPRCASAEPAEPAEPAEPAEPAEPSAREEPERLDAEAGDSKATDEPDAALAALPVKDGEEKPEPEPRRKDTSDMLPASVKPGQQPSALLALENKKSVRSLQRSTSQIRGNKHPFALYGWGEKQMDTGNQKTHNVCASASVNEIHESALRAKNRRQVEKRKLAAQRQRAYSVDVDKSRTVKVSTENPWMTEYMRCYSARA
SIO_010081: LOC125366852
subclass of: SO_0000673
so part of: LOC125366852
location: complement(join(180058..180231,181565..181836,185873..186224))
location: region:180058-186224:-1
so has part: feature:185873-186224:-1:exon
so has part: feature:181565-181836:-1:exon
so has part: feature:180058-180231:-1:exon

XP_048223533.1
type: Protein
SIO_000068: ncbiprotein

position:180058:-1
position: 180058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186224:-1
position: 186224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185873-186224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181565-181836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:180058-180231:-1:exon

LOC125366852
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125366852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriole, cilia and spindle-associated protein isoform X2
translation: MSPGSGVKSEYMKRYREPRWDEFAACYRELRRYRLGRRLLEQAHAPWLWDAWGPDGASDSSASSSPAPRCASAEPAEPAEPAEPAEPAEPSAREEPERLDAEAGDSKATDEPDAALAALPVKDGEEKPEPEPRRKDTSDMLPASVKPGQQPSALLALENKKSVRSLQRSTSQIRGNKHPFALYGWGEKQMDTGNQKTHNVCASASVNEVRLPWK
SIO_010081: LOC125366852
subclass of: SO_0000673
so part of: LOC125366852
location: complement(join(181544..181836,185873..186224))
location: region:181544-186224:-1
so has part: feature:185873-186224:-1:exon
so has part: feature:181544-181836:-1:exon

XP_048223534.1
type: Protein
SIO_000068: ncbiprotein

position:181544:-1
position: 181544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185873-186224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181544-181836:-1:exon

Acta1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Acta1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(210891..214900)
location: region:210891-214900:-1
so has part: feature:210891-214900:-1:exon
subclass of: SO_0000010

125367172
type: Gene
SIO_000068: ncbigene

position:210891:-1
position: 210891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214900:-1
position: 214900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210891-214900:-1:exon

Acta1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Acta1
product: actin alpha 1, skeletal muscle
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367799.1
SIO_010081: Acta1
subclass of: SO_0000673
so part of: Acta1
location: complement(join(210891..211219,211316..211497,212859..213050,213145..213306,213730..214054,214152..214292,214803..214900))
location: region:210891-214900:-1
so has part: feature:214803-214900:-1:exon
so has part: feature:214152-214292:-1:exon
so has part: feature:213730-214054:-1:exon
so has part: feature:213145-213306:-1:exon
so has part: feature:212859-213050:-1:exon
so has part: feature:211316-211497:-1:exon
so has part: feature:210891-211219:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:214803-214900:-1:exon

position:214803:-1
position: 214803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214152-214292:-1:exon

position:214152:-1
position: 214152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214292:-1
position: 214292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:213730-214054:-1:exon

position:213730:-1
position: 213730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214054:-1
position: 214054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:213145-213306:-1:exon

position:213145:-1
position: 213145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213306:-1
position: 213306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:212859-213050:-1:exon

position:212859:-1
position: 212859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213050:-1
position: 213050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:211316-211497:-1:exon

position:211316:-1
position: 211316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211497:-1
position: 211497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:210891-211219:-1:exon

position:211219:-1
position: 211219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Acta1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Acta1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin, alpha skeletal muscle
translation: MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF
SIO_010081: Acta1
subclass of: SO_0000673
so part of: Acta1
location: complement(join(211076..211219,211316..211497,212859..213050,213145..213306,213730..214054,214152..214280))
location: region:211076-214280:-1
so has part: feature:214152-214280:-1:exon
so has part: feature:213730-214054:-1:exon
so has part: feature:213145-213306:-1:exon
so has part: feature:212859-213050:-1:exon
so has part: feature:211316-211497:-1:exon
so has part: feature:211076-211219:-1:exon

XP_048223756.1
type: Protein
SIO_000068: ncbiprotein

position:211076:-1
position: 211076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214280:-1
position: 214280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214152-214280:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213730-214054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213145-213306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212859-213050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211316-211497:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211076-211219:-1:exon

Nup133
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Nup133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(220161..260729)
location: region:220161-260729:-1
so has part: feature:220161-260729:-1:exon
subclass of: SO_0000010

125367235
type: Gene
SIO_000068: ncbigene

position:220161:-1
position: 220161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260729:-1
position: 260729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220161-260729:-1:exon

Nup133
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Nup133
product: nucleoporin 133
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367837.1
SIO_010081: Nup133
subclass of: SO_0000673
so part of: Nup133
location: complement(join(220161..220354,221297..221385,223645..223709,224924..225004,225721..225839,227008..227143,228891..229049,232152..232285,232772..233023,233724..233823,234523..234645,235214..235438,237990..238084,239662..239825,242526..242617,244363..244520,245138..245285,245998..246145,250060..250130,250598..250753,252458..252628,253555..253689,255330..255437,256421..256524,257779..257897,260470..260729))
location: region:220161-260729:-1
so has part: feature:260470-260729:-1:exon
so has part: feature:257779-257897:-1:exon
so has part: feature:256421-256524:-1:exon
so has part: feature:255330-255437:-1:exon
so has part: feature:253555-253689:-1:exon
so has part: feature:252458-252628:-1:exon
so has part: feature:250598-250753:-1:exon
so has part: feature:250060-250130:-1:exon
so has part: feature:245998-246145:-1:exon
so has part: feature:245138-245285:-1:exon
so has part: feature:244363-244520:-1:exon
so has part: feature:242526-242617:-1:exon
so has part: feature:239662-239825:-1:exon
so has part: feature:237990-238084:-1:exon
so has part: feature:235214-235438:-1:exon
so has part: feature:234523-234645:-1:exon
so has part: feature:233724-233823:-1:exon
so has part: feature:232772-233023:-1:exon
so has part: feature:232152-232285:-1:exon
so has part: feature:228891-229049:-1:exon
so has part: feature:227008-227143:-1:exon
so has part: feature:225721-225839:-1:exon
so has part: feature:224924-225004:-1:exon
so has part: feature:223645-223709:-1:exon
so has part: feature:221297-221385:-1:exon
so has part: feature:220161-220354:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:260470-260729:-1:exon

position:260470:-1
position: 260470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:257779-257897:-1:exon

position:257779:-1
position: 257779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257897:-1
position: 257897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:256421-256524:-1:exon

position:256421:-1
position: 256421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256524:-1
position: 256524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:255330-255437:-1:exon

position:255330:-1
position: 255330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255437:-1
position: 255437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:253555-253689:-1:exon

position:253555:-1
position: 253555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253689:-1
position: 253689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:252458-252628:-1:exon

position:252458:-1
position: 252458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252628:-1
position: 252628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:250598-250753:-1:exon

position:250598:-1
position: 250598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250753:-1
position: 250753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:250060-250130:-1:exon

position:250060:-1
position: 250060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250130:-1
position: 250130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:245998-246145:-1:exon

position:245998:-1
position: 245998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246145:-1
position: 246145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:245138-245285:-1:exon

position:245138:-1
position: 245138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245285:-1
position: 245285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:244363-244520:-1:exon

position:244363:-1
position: 244363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244520:-1
position: 244520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:242526-242617:-1:exon

position:242526:-1
position: 242526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242617:-1
position: 242617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:239662-239825:-1:exon

position:239662:-1
position: 239662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239825:-1
position: 239825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:237990-238084:-1:exon

position:237990:-1
position: 237990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238084:-1
position: 238084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:235214-235438:-1:exon

position:235214:-1
position: 235214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235438:-1
position: 235438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:234523-234645:-1:exon

position:234523:-1
position: 234523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234645:-1
position: 234645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:233724-233823:-1:exon

position:233724:-1
position: 233724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233823:-1
position: 233823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:232772-233023:-1:exon

position:232772:-1
position: 232772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233023:-1
position: 233023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:232152-232285:-1:exon

position:232152:-1
position: 232152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232285:-1
position: 232285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:228891-229049:-1:exon

position:228891:-1
position: 228891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229049:-1
position: 229049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:227008-227143:-1:exon

position:227008:-1
position: 227008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227143:-1
position: 227143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:225721-225839:-1:exon

position:225721:-1
position: 225721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225839:-1
position: 225839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:224924-225004:-1:exon

position:224924:-1
position: 224924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225004:-1
position: 225004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:223645-223709:-1:exon

position:223645:-1
position: 223645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223709:-1
position: 223709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:221297-221385:-1:exon

position:221297:-1
position: 221297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221385:-1
position: 221385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:220161-220354:-1:exon

position:220354:-1
position: 220354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Nup133
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Nup133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup133
translation: MFPAVPSPRTPGPGSRRAPLAGVGPASTPRAASRRGLPVGAVVGSPALFSPVGRRSSLSSRGTPTRTVPHQSIMEFVNYDVKTFGSSLPVKVMEALAMAEVDDPLSVFVDESGWAYLVCKEKLLIWKITPSPVTKLSVCKELQLPLSDLHLNTDLVALSYSAASGETHSIQAVAVMVATREGSVRYWPSLAGEDTYTETCVDLGGDKTCMFLTAVQGGSFILSSVGCQLIRLIPESSGKIHQHVLPQGQGMLSGIGRRVSSLFGILSPSSDLMLAGVLWDKGNSSFYSLTNSNISKWELDDSSEKQAHSWDVHRALKENITDAIWGSESNYEAIKEGVNIRYLDLKQNCDGLLVLAAAWHPADSPCLIYYSLITVEDNGSQKSDAITVEVTQYNPPFQSEDLIMCRLMVPNFSSQAAYLYTENSVYVCSTGTGKSSLPPEKIVFTAQGDGILGAGSYGGVPVLFSRNNGLVSITSRESVSLLAEDLEESLASSVAGPNNESIVFETSMKKETIAQEDKTKLLKAAFLQYCRKDVGRAQMMVDEMFSSRSDLDSDSELDRAVTQISVDLVDDYPASDPRWAESVPEEAPGLSNTSLIILHQLEDKVKAHCLLVDFLHHVGLFERLGTSPVRGTLMATRLLLCEHAEKLSAAIALKNHHSRLPDLVNTAILIALNKRDCEVPSSLTPADVFFREVSQVDTICECLLEHEEQVLRDAPLDSVEWAEVAISVNTVLKDMLQAATHYRQNRNSMYRREEPVGKEPEYVPWTATSGPAGIRTAVVRQHGVILKTVYPQADSNLRNIVTEQLVALIDCFLDGYVLQLKSLDKPSNQERYSNLEVEYLQKRSDLLSPLLTLGQYPWAASLAEKYCDFDILVQMCEQTDNQARLQRYMTQFADQNFSDFLFRWYLEKGKRGKLLSQPISQHGQLANFLQAHEHLSWLHEINSQELEKAHATLLGLANMETRYFAKKKTLLGLSKLAALASDLSEDMLQEKIEAMAEQERFLLHQETLPEQLLSEKQLSLSAMPVLTAPQLISLYICEENRRANEYDFKKALDLLEYIDEEEDVNINDLKLEILCRALQRDNWSSSDGKDDPIEVSKDSVFVKILQKLLKDGIQLSEYLPEVKDLLQADQLGSLKSNPYFEFVLKANYEYYVQG
SIO_010081: Nup133
subclass of: SO_0000673
so part of: Nup133
location: complement(join(220224..220354,221297..221385,223645..223709,224924..225004,225721..225839,227008..227143,228891..229049,232152..232285,232772..233023,233724..233823,234523..234645,235214..235438,237990..238084,239662..239825,242526..242617,244363..244520,245138..245285,245998..246145,250060..250130,250598..250753,252458..252628,253555..253689,255330..255437,256421..256524,257779..257897,260470..260651))
location: region:220224-260651:-1
so has part: feature:260470-260651:-1:exon
so has part: feature:257779-257897:-1:exon
so has part: feature:256421-256524:-1:exon
so has part: feature:255330-255437:-1:exon
so has part: feature:253555-253689:-1:exon
so has part: feature:252458-252628:-1:exon
so has part: feature:250598-250753:-1:exon
so has part: feature:250060-250130:-1:exon
so has part: feature:245998-246145:-1:exon
so has part: feature:245138-245285:-1:exon
so has part: feature:244363-244520:-1:exon
so has part: feature:242526-242617:-1:exon
so has part: feature:239662-239825:-1:exon
so has part: feature:237990-238084:-1:exon
so has part: feature:235214-235438:-1:exon
so has part: feature:234523-234645:-1:exon
so has part: feature:233724-233823:-1:exon
so has part: feature:232772-233023:-1:exon
so has part: feature:232152-232285:-1:exon
so has part: feature:228891-229049:-1:exon
so has part: feature:227008-227143:-1:exon
so has part: feature:225721-225839:-1:exon
so has part: feature:224924-225004:-1:exon
so has part: feature:223645-223709:-1:exon
so has part: feature:221297-221385:-1:exon
so has part: feature:220224-220354:-1:exon

XP_048223794.1
type: Protein
SIO_000068: ncbiprotein

position:220224:-1
position: 220224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260651:-1
position: 260651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260470-260651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:257779-257897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256421-256524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255330-255437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:253555-253689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:252458-252628:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:250598-250753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:250060-250130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:245998-246145:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:245138-245285:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:244363-244520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:242526-242617:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239662-239825:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:237990-238084:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:235214-235438:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:234523-234645:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:233724-233823:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:232772-233023:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:232152-232285:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:228891-229049:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:227008-227143:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:225721-225839:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:224924-225004:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:223645-223709:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:221297-221385:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:220224-220354:-1:exon

Abcb10
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Abcb10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(268033..301876)
location: region:268033-301876:-1
so has part: feature:268033-301876:-1:exon
subclass of: SO_0000010

125367236
type: Gene
SIO_000068: ncbigene

position:268033:-1
position: 268033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301876:-1
position: 301876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268033-301876:-1:exon

Abcb10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Abcb10
product: ATP binding cassette subfamily B member 10, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367841.1
SIO_010081: Abcb10
subclass of: SO_0000673
so part of: Abcb10
location: complement(join(268033..268365,268960..268994,269955..269998,271442..271622,273405..273484,274843..275052,276062..276157,285374..285509,286620..286766,287903..288037,291550..291752,292522..292773,295561..295565,301865..301876))
location: region:268033-301876:-1
so has part: feature:301865-301876:-1:exon
so has part: feature:295561-295565:-1:exon
so has part: feature:292522-292773:-1:exon
so has part: feature:291550-291752:-1:exon
so has part: feature:287903-288037:-1:exon
so has part: feature:286620-286766:-1:exon
so has part: feature:285374-285509:-1:exon
so has part: feature:276062-276157:-1:exon
so has part: feature:274843-275052:-1:exon
so has part: feature:273405-273484:-1:exon
so has part: feature:271442-271622:-1:exon
so has part: feature:269955-269998:-1:exon
so has part: feature:268960-268994:-1:exon
so has part: feature:268033-268365:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:301865-301876:-1:exon

position:301865:-1
position: 301865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295561-295565:-1:exon

position:295561:-1
position: 295561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295565:-1
position: 295565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:292522-292773:-1:exon

position:292522:-1
position: 292522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292773:-1
position: 292773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:291550-291752:-1:exon

position:291550:-1
position: 291550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291752:-1
position: 291752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:287903-288037:-1:exon

position:287903:-1
position: 287903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288037:-1
position: 288037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:286620-286766:-1:exon

position:286620:-1
position: 286620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286766:-1
position: 286766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:285374-285509:-1:exon

position:285374:-1
position: 285374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285509:-1
position: 285509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:276062-276157:-1:exon

position:276062:-1
position: 276062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276157:-1
position: 276157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:274843-275052:-1:exon

position:274843:-1
position: 274843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275052:-1
position: 275052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:273405-273484:-1:exon

position:273405:-1
position: 273405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273484:-1
position: 273484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:271442-271622:-1:exon

position:271442:-1
position: 271442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271622:-1
position: 271622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:269955-269998:-1:exon

position:269955:-1
position: 269955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269998:-1
position: 269998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:268960-268994:-1:exon

position:268960:-1
position: 268960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268994:-1
position: 268994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:268033-268365:-1:exon

position:268365:-1
position: 268365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Abcb10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Abcb10
product: ATP binding cassette subfamily B member 10, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367840.1
SIO_010081: Abcb10
subclass of: SO_0000673
so part of: Abcb10
location: complement(join(268033..268365,268960..268994,269955..269998,271442..271622,273405..273484,274843..275052,276062..276157,285374..285509,286620..286766,287903..288037,291550..291752,292522..292722,297173..297474,297517..297634))
location: region:268033-297634:-1
so has part: feature:297517-297634:-1:exon
so has part: feature:297173-297474:-1:exon
so has part: feature:292522-292722:-1:exon
so has part: feature:291550-291752:-1:exon
so has part: feature:287903-288037:-1:exon
so has part: feature:286620-286766:-1:exon
so has part: feature:285374-285509:-1:exon
so has part: feature:276062-276157:-1:exon
so has part: feature:274843-275052:-1:exon
so has part: feature:273405-273484:-1:exon
so has part: feature:271442-271622:-1:exon
so has part: feature:269955-269998:-1:exon
so has part: feature:268960-268994:-1:exon
so has part: feature:268033-268365:-1:exon

position:297634:-1
position: 297634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297517-297634:-1:exon

position:297517:-1
position: 297517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297173-297474:-1:exon

position:297173:-1
position: 297173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297474:-1
position: 297474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:292522-292722:-1:exon

position:292722:-1
position: 292722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:291550-291752:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:287903-288037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:286620-286766:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285374-285509:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276062-276157:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274843-275052:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273405-273484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:271442-271622:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:269955-269998:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:268960-268994:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:268033-268365:-1:exon

Abcb10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Abcb10
product: ATP binding cassette subfamily B member 10, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367839.1
SIO_010081: Abcb10
subclass of: SO_0000673
so part of: Abcb10
location: complement(join(268033..268365,268960..268994,269955..269998,271442..271622,273405..273484,274843..275049,276062..276157,285374..285509,286620..286766,287903..288037,291550..291752,292522..292722,297173..297634))
location: region:268033-297634:-1
so has part: feature:297173-297634:-1:exon
so has part: feature:292522-292722:-1:exon
so has part: feature:291550-291752:-1:exon
so has part: feature:287903-288037:-1:exon
so has part: feature:286620-286766:-1:exon
so has part: feature:285374-285509:-1:exon
so has part: feature:276062-276157:-1:exon
so has part: feature:274843-275049:-1:exon
so has part: feature:273405-273484:-1:exon
so has part: feature:271442-271622:-1:exon
so has part: feature:269955-269998:-1:exon
so has part: feature:268960-268994:-1:exon
so has part: feature:268033-268365:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297173-297634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292522-292722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:291550-291752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:287903-288037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:286620-286766:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285374-285509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:276062-276157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274843-275049:-1:exon

position:275049:-1
position: 275049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:273405-273484:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:271442-271622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:269955-269998:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:268960-268994:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:268033-268365:-1:exon

Abcb10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Abcb10
product: ATP binding cassette subfamily B member 10, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367838.1
SIO_010081: Abcb10
subclass of: SO_0000673
so part of: Abcb10
location: complement(join(268033..268365,268960..268994,269955..269998,271442..271622,273405..273484,274843..275052,276062..276157,285374..285509,286620..286766,287903..288037,291550..291752,292522..292722,297173..297634))
location: region:268033-297634:-1
so has part: feature:297173-297634:-1:exon
so has part: feature:292522-292722:-1:exon
so has part: feature:291550-291752:-1:exon
so has part: feature:287903-288037:-1:exon
so has part: feature:286620-286766:-1:exon
so has part: feature:285374-285509:-1:exon
so has part: feature:276062-276157:-1:exon
so has part: feature:274843-275052:-1:exon
so has part: feature:273405-273484:-1:exon
so has part: feature:271442-271622:-1:exon
so has part: feature:269955-269998:-1:exon
so has part: feature:268960-268994:-1:exon
so has part: feature:268033-268365:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297173-297634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292522-292722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:291550-291752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:287903-288037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:286620-286766:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285374-285509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:276062-276157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274843-275052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273405-273484:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:271442-271622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:269955-269998:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:268960-268994:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:268033-268365:-1:exon

Abcb10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Abcb10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family B member 10, mitochondrial isoform X3
translation: MRGPAAWAPARLLLRGPGPAARPWAPAARAWTPLVRETPAARVPGTSPPRLPGGWGLARALGQWAGASGFHRSAALVPRPAPRPPRARLQTGPVAEARDAGDDSQRRPAAARRSEAQRLLGLVGPERGRLSAAVGFLAVSSAVTMSAPFFLGRIIDVIYTNAAVEYSHSLTRLCMGLTGVFLCGATANAIRIYLMQSSGQRIVNRLRMLLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASIGISMMFFVSPSLATFVLSVVPPMSILAVIYGRYLRKLSKATQDSLAQATQLAEERIGNIRTVRAFGKEMTEVEKYASGVDHVLQLARKEAFARAGFFGAAGLSGNLIVLLVLYKGGLLMGTAHMTVGELSSFLMYAFWVGLSIGGLSSFYSELMKGLGAGGRLWELLEREPQLPFNEGVTLSEKSFQGALEFKNVHFAYPARPELPVFQDFSLSIPAGSVTALVGSSGSGKSSVVSLLLRLYDPVSGTVSLDGHDIRQLNPVWLRSKIGTVSQEPVLFSCSIAENIAYGAANPSSVTVEQVERVAEVANAASFIRSFPQGFHTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMEGRTVLIIAHRLSTIKNANLVAVLNQGKITECGKHEELLSKPDGIYRKLMNKQSSISV
SIO_010081: Abcb10
subclass of: SO_0000673
so part of: Abcb10
location: complement(join(268134..268365,268960..268994,269955..269998,271442..271622,273405..273484,274843..275052,276062..276157,285374..285509,286620..286766,287903..288037,291550..291752,292522..292722,297173..297474,297517..297608))
location: region:268134-297608:-1
so has part: feature:297517-297608:-1:exon
so has part: feature:297173-297474:-1:exon
so has part: feature:292522-292722:-1:exon
so has part: feature:291550-291752:-1:exon
so has part: feature:287903-288037:-1:exon
so has part: feature:286620-286766:-1:exon
so has part: feature:285374-285509:-1:exon
so has part: feature:276062-276157:-1:exon
so has part: feature:274843-275052:-1:exon
so has part: feature:273405-273484:-1:exon
so has part: feature:271442-271622:-1:exon
so has part: feature:269955-269998:-1:exon
so has part: feature:268960-268994:-1:exon
so has part: feature:268134-268365:-1:exon

XP_048223797.1
type: Protein
SIO_000068: ncbiprotein

position:268134:-1
position: 268134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297608:-1
position: 297608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297517-297608:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297173-297474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:292522-292722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291550-291752:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:287903-288037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:286620-286766:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285374-285509:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276062-276157:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274843-275052:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273405-273484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:271442-271622:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:269955-269998:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:268960-268994:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:268134-268365:-1:exon

Abcb10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Abcb10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family B member 10, mitochondrial isoform X2
translation: MRGPAAWAPARLLLRGPGPAARPWAPAARAWSPAARPWAPAARARTPLVRETPAARVPGTSPPRLPGGWGLARALGQWAGASGFHRSAALVPRPAPRPPRARLQTGPVAEARDAGDDSQRRPAAARRSEAQRLLGLVGPERGRLSAAVGFLAVSSAVTMSAPFFLGRIIDVIYTNAAVEYSHSLTRLCMGLTGVFLCGATANAIRIYLMQSSGQRIVNRLRMLLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASIGISMMFFVSPSLATFVLSVVPPMSILAVIYGRYLRKLSKATQDSLAQATQLAEERIGNIRTVRAFGKEMTEVEKYASGVDHVLQLARKEAFARAGFFGAAGLSGNLIVLLVLYKGGLLMGTAHMTVGELSSFLMYAFWVGLSIGGLSSFYSELMKGLGAGGRLWELLEREPQLPFNGVTLSEKSFQGALEFKNVHFAYPARPELPVFQDFSLSIPAGSVTALVGSSGSGKSSVVSLLLRLYDPVSGTVSLDGHDIRQLNPVWLRSKIGTVSQEPVLFSCSIAENIAYGAANPSSVTVEQVERVAEVANAASFIRSFPQGFHTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMEGRTVLIIAHRLSTIKNANLVAVLNQGKITECGKHEELLSKPDGIYRKLMNKQSSISV
SIO_010081: Abcb10
subclass of: SO_0000673
so part of: Abcb10
location: complement(join(268134..268365,268960..268994,269955..269998,271442..271622,273405..273484,274843..275049,276062..276157,285374..285509,286620..286766,287903..288037,291550..291752,292522..292722,297173..297608))
location: region:268134-297608:-1
so has part: feature:297173-297608:-1:exon
so has part: feature:292522-292722:-1:exon
so has part: feature:291550-291752:-1:exon
so has part: feature:287903-288037:-1:exon
so has part: feature:286620-286766:-1:exon
so has part: feature:285374-285509:-1:exon
so has part: feature:276062-276157:-1:exon
so has part: feature:274843-275049:-1:exon
so has part: feature:273405-273484:-1:exon
so has part: feature:271442-271622:-1:exon
so has part: feature:269955-269998:-1:exon
so has part: feature:268960-268994:-1:exon
so has part: feature:268134-268365:-1:exon

XP_048223796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297173-297608:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292522-292722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:291550-291752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:287903-288037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:286620-286766:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285374-285509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:276062-276157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274843-275049:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273405-273484:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:271442-271622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:269955-269998:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:268960-268994:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:268134-268365:-1:exon

Abcb10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Abcb10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family B member 10, mitochondrial isoform X1
translation: MRGPAAWAPARLLLRGPGPAARPWAPAARAWSPAARPWAPAARARTPLVRETPAARVPGTSPPRLPGGWGLARALGQWAGASGFHRSAALVPRPAPRPPRARLQTGPVAEARDAGDDSQRRPAAARRSEAQRLLGLVGPERGRLSAAVGFLAVSSAVTMSAPFFLGRIIDVIYTNAAVEYSHSLTRLCMGLTGVFLCGATANAIRIYLMQSSGQRIVNRLRMLLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASIGISMMFFVSPSLATFVLSVVPPMSILAVIYGRYLRKLSKATQDSLAQATQLAEERIGNIRTVRAFGKEMTEVEKYASGVDHVLQLARKEAFARAGFFGAAGLSGNLIVLLVLYKGGLLMGTAHMTVGELSSFLMYAFWVGLSIGGLSSFYSELMKGLGAGGRLWELLEREPQLPFNEGVTLSEKSFQGALEFKNVHFAYPARPELPVFQDFSLSIPAGSVTALVGSSGSGKSSVVSLLLRLYDPVSGTVSLDGHDIRQLNPVWLRSKIGTVSQEPVLFSCSIAENIAYGAANPSSVTVEQVERVAEVANAASFIRSFPQGFHTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMEGRTVLIIAHRLSTIKNANLVAVLNQGKITECGKHEELLSKPDGIYRKLMNKQSSISV
SIO_010081: Abcb10
subclass of: SO_0000673
so part of: Abcb10
location: complement(join(268134..268365,268960..268994,269955..269998,271442..271622,273405..273484,274843..275052,276062..276157,285374..285509,286620..286766,287903..288037,291550..291752,292522..292722,297173..297608))
location: region:268134-297608:-1
so has part: feature:297173-297608:-1:exon
so has part: feature:292522-292722:-1:exon
so has part: feature:291550-291752:-1:exon
so has part: feature:287903-288037:-1:exon
so has part: feature:286620-286766:-1:exon
so has part: feature:285374-285509:-1:exon
so has part: feature:276062-276157:-1:exon
so has part: feature:274843-275052:-1:exon
so has part: feature:273405-273484:-1:exon
so has part: feature:271442-271622:-1:exon
so has part: feature:269955-269998:-1:exon
so has part: feature:268960-268994:-1:exon
so has part: feature:268134-268365:-1:exon

XP_048223795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297173-297608:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292522-292722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:291550-291752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:287903-288037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:286620-286766:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285374-285509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:276062-276157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274843-275052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273405-273484:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:271442-271622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:269955-269998:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:268960-268994:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:268134-268365:-1:exon

Abcb10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Abcb10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family B member 10, mitochondrial isoform X4
translation: MHTHSCLPAAVGFLAVSSAVTMSAPFFLGRIIDVIYTNAAVEYSHSLTRLCMGLTGVFLCGATANAIRIYLMQSSGQRIVNRLRMLLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASIGISMMFFVSPSLATFVLSVVPPMSILAVIYGRYLRKLSKATQDSLAQATQLAEERIGNIRTVRAFGKEMTEVEKYASGVDHVLQLARKEAFARAGFFGAAGLSGNLIVLLVLYKGGLLMGTAHMTVGELSSFLMYAFWVGLSIGGLSSFYSELMKGLGAGGRLWELLEREPQLPFNEGVTLSEKSFQGALEFKNVHFAYPARPELPVFQDFSLSIPAGSVTALVGSSGSGKSSVVSLLLRLYDPVSGTVSLDGHDIRQLNPVWLRSKIGTVSQEPVLFSCSIAENIAYGAANPSSVTVEQVERVAEVANAASFIRSFPQGFHTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMEGRTVLIIAHRLSTIKNANLVAVLNQGKITECGKHEELLSKPDGIYRKLMNKQSSISV
SIO_010081: Abcb10
subclass of: SO_0000673
so part of: Abcb10
location: complement(join(268134..268365,268960..268994,269955..269998,271442..271622,273405..273484,274843..275052,276062..276157,285374..285509,286620..286766,287903..288037,291550..291752,292522..292747))
location: region:268134-292747:-1
so has part: feature:292522-292747:-1:exon
so has part: feature:291550-291752:-1:exon
so has part: feature:287903-288037:-1:exon
so has part: feature:286620-286766:-1:exon
so has part: feature:285374-285509:-1:exon
so has part: feature:276062-276157:-1:exon
so has part: feature:274843-275052:-1:exon
so has part: feature:273405-273484:-1:exon
so has part: feature:271442-271622:-1:exon
so has part: feature:269955-269998:-1:exon
so has part: feature:268960-268994:-1:exon
so has part: feature:268134-268365:-1:exon

XP_048223798.1
type: Protein
SIO_000068: ncbiprotein

position:292747:-1
position: 292747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292522-292747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:291550-291752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287903-288037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286620-286766:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285374-285509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276062-276157:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:274843-275052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:273405-273484:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:271442-271622:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:269955-269998:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:268960-268994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:268134-268365:-1:exon

Taf5l
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Taf5l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(298899..324407)
location: region:298899-324407:-1
so has part: feature:298899-324407:-1:exon
subclass of: SO_0000010

125367237
type: Gene
SIO_000068: ncbigene

position:298899:-1
position: 298899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324407:-1
position: 324407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298899-324407:-1:exon

Taf5l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Taf5l
product: TATA-box binding protein associated factor 5 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048367845.1
SIO_010081: Taf5l
subclass of: SO_0000673
so part of: Taf5l
location: complement(join(298899..300999,307756..308614,311794..311898))
location: region:298899-311898:-1
so has part: feature:311794-311898:-1:exon
so has part: feature:307756-308614:-1:exon
so has part: feature:298899-300999:-1:exon

position:311898:-1
position: 311898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311794-311898:-1:exon

position:311794:-1
position: 311794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307756-308614:-1:exon

position:307756:-1
position: 307756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308614:-1
position: 308614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:298899-300999:-1:exon

position:300999:-1
position: 300999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Taf5l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Taf5l
product: TATA-box binding protein associated factor 5 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048367844.1
SIO_010081: Taf5l
subclass of: SO_0000673
so part of: Taf5l
location: complement(join(298902..300999,307756..308480,311794..311898,314449..314593,323858..324020))
location: region:298902-324020:-1
so has part: feature:323858-324020:-1:exon
so has part: feature:314449-314593:-1:exon
so has part: feature:311794-311898:-1:exon
so has part: feature:307756-308480:-1:exon
so has part: feature:298902-300999:-1:exon

position:298902:-1
position: 298902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324020:-1
position: 324020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323858-324020:-1:exon

position:323858:-1
position: 323858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314449-314593:-1:exon

position:314449:-1
position: 314449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314593:-1
position: 314593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:311794-311898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307756-308480:-1:exon

position:308480:-1
position: 308480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:298902-300999:-1:exon

Taf5l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Taf5l
product: TATA-box binding protein associated factor 5 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048367843.1
SIO_010081: Taf5l
subclass of: SO_0000673
so part of: Taf5l
location: complement(join(298904..300999,307756..308480,311794..311898,314449..314593,324251..324407))
location: region:298904-324407:-1
so has part: feature:324251-324407:-1:exon
so has part: feature:314449-314593:-1:exon
so has part: feature:311794-311898:-1:exon
so has part: feature:307756-308480:-1:exon
so has part: feature:298904-300999:-1:exon

position:298904:-1
position: 298904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324251-324407:-1:exon

position:324251:-1
position: 324251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314449-314593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311794-311898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307756-308480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298904-300999:-1:exon

Taf5l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Taf5l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
translation: MKRVRTEQVQVAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANVVSAAPCQAEPQQYEIQFGRLRSFLTDSDSQHSHEVMPLLYPLFVYLHFNLVQSGPKSTIESFYSRFHGMFLQNASQKDVIEQLQTTQTFQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQSDNNTALCKVLTVHIHLDVQPAKRTDYQLYASGSSSRNESSGLEPPEVPSPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDSSCIKLWSLQSKKLKSEPHRVDTSRIRLACDTLEEEEDEDDSVGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLVASASMDNSVRVWDIRNTCCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
SIO_010081: Taf5l
subclass of: SO_0000673
so part of: Taf5l
location: complement(join(300202..300999,307756..308480,311794..311898,314449..314590))
location: region:300202-314590:-1
so has part: feature:314449-314590:-1:exon
so has part: feature:311794-311898:-1:exon
so has part: feature:307756-308480:-1:exon
so has part: feature:300202-300999:-1:exon

XP_048223800.1
type: Protein
SIO_000068: ncbiprotein

position:300202:-1
position: 300202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314590:-1
position: 314590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314449-314590:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311794-311898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307756-308480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300202-300999:-1:exon

Taf5l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Taf5l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
translation: MKRVRTEQVQVAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANVVSAAPCQAEPQQYEIQFGRLRSFLTDSDSQHSHEVMPLLYPLFVYLHFNLVQSGPKSTIESFYSRFHGMFLQNASQKDVIEQLQTTQTFQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQSDNNTALCKVLTVHIHLDVQPAKRTDYQLYASGSSSRNESSGLEPPEVPSPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDSSCIKLWSLQSKKLKSEPHRVDTSRIRLACDTLEEEEDEDDSVGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLVASASMDNSVRVWDIRNTCCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
SIO_010081: Taf5l
subclass of: SO_0000673
so part of: Taf5l
location: complement(join(300202..300999,307756..308480,311794..311898,314449..314590))
location: region:300202-314590:-1
so has part: feature:314449-314590:-1:exon
so has part: feature:311794-311898:-1:exon
so has part: feature:307756-308480:-1:exon
so has part: feature:300202-300999:-1:exon

XP_048223801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314449-314590:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311794-311898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307756-308480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300202-300999:-1:exon

Taf5l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Taf5l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X2
translation: MSAFFLIADSDSQHSHEVMPLLYPLFVYLHFNLVQSGPKSTIESFYSRFHGMFLQNASQKDVIEQLQTTQTFQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQSDNNTALCKVLTVHIHLDVQPAKRTDYQLYASGSSSRNESSGLEPPEVPSPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDSSCIKLWSLQSKKLKSEPHRVDTSRIRLACDTLEEEEDEDDSVGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLVASASMDNSVRVWDIRNTCCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
SIO_010081: Taf5l
subclass of: SO_0000673
so part of: Taf5l
location: complement(join(300202..300999,307756..308505))
location: region:300202-308505:-1
so has part: feature:307756-308505:-1:exon
so has part: feature:300202-300999:-1:exon

XP_048223802.1
type: Protein
SIO_000068: ncbiprotein

position:308505:-1
position: 308505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307756-308505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300202-300999:-1:exon

Urb2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Urb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 324455..348443
location: region:324455-348443:1
so has part: feature:324455-348443:1:exon
subclass of: SO_0000010

125367234
type: Gene
SIO_000068: ncbigene

position:324455:1
position: 324455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348443:1
position: 348443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324455-348443:1:exon

Urb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Urb2
product: URB2 ribosome biogenesis homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048367835.1
SIO_010081: Urb2
subclass of: SO_0000673
so part of: Urb2
location: join(324455..324583,326030..326168,327479..327655,329698..333025,336550..336710,338620..338730,339533..339775,340985..341072,344744..344883,348091..348443)
location: region:324455-348443:1
so has part: feature:324455-324583:1:exon
so has part: feature:326030-326168:1:exon
so has part: feature:327479-327655:1:exon
so has part: feature:329698-333025:1:exon
so has part: feature:336550-336710:1:exon
so has part: feature:338620-338730:1:exon
so has part: feature:339533-339775:1:exon
so has part: feature:340985-341072:1:exon
so has part: feature:344744-344883:1:exon
so has part: feature:348091-348443:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324455-324583:1:exon

position:324583:1
position: 324583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326030-326168:1:exon

position:326030:1
position: 326030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326168:1
position: 326168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327479-327655:1:exon

position:327479:1
position: 327479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327655:1
position: 327655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:329698-333025:1:exon

position:329698:1
position: 329698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333025:1
position: 333025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:336550-336710:1:exon

position:336550:1
position: 336550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336710:1
position: 336710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:338620-338730:1:exon

position:338620:1
position: 338620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338730:1
position: 338730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:339533-339775:1:exon

position:339533:1
position: 339533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339775:1
position: 339775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:340985-341072:1:exon

position:340985:1
position: 340985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341072:1
position: 341072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:344744-344883:1:exon

position:344744:1
position: 344744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344883:1
position: 344883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:348091-348443:1:exon

position:348091:1
position: 348091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Urb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Urb2
product: URB2 ribosome biogenesis homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048367836.1
SIO_010081: Urb2
subclass of: SO_0000673
so part of: Urb2
location: join(324840..325022,326030..326168,327479..327655,329698..333025,336550..336710,338620..338730,339533..339775,340985..341072,344744..344883,348091..348443)
location: region:324840-348443:1
so has part: feature:324840-325022:1:exon
so has part: feature:326030-326168:1:exon
so has part: feature:327479-327655:1:exon
so has part: feature:329698-333025:1:exon
so has part: feature:336550-336710:1:exon
so has part: feature:338620-338730:1:exon
so has part: feature:339533-339775:1:exon
so has part: feature:340985-341072:1:exon
so has part: feature:344744-344883:1:exon
so has part: feature:348091-348443:1:exon

position:324840:1
position: 324840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324840-325022:1:exon

position:325022:1
position: 325022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326030-326168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327479-327655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:329698-333025:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336550-336710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338620-338730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:339533-339775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:340985-341072:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:344744-344883:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:348091-348443:1:exon

Urb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Urb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unhealthy ribosome biogenesis protein 2 homolog
translation: MAAVYSGISLKLKSKTTAWEDKLKLAHFAWISHQCFLPNKEQVLLDWASQSLVTFYKKKLELKEDVVERLWIYVDNIVHSRKLQSLLKKGKTVNLQVSLIKIINERITDFALSGHHGNICAVLHCCEGILSTPALAVIYTAKQELMVTLLSQLCWSACQQPEETVTTHLFKVIHLALGHYLLLQQQQANSRRVFGDMTGHLLQPCLILRHLLSGGVWTRAGQGQQWQVLSRDVRSQIEALLQGGIFRLDLLSSYKEELLDQQQSDKKMGALKNLLTPMDTVITRLMDIGDGKPDLHASVVASSVALLYRLFLDSYLKEGNQFLCFQALPKLFGCLQLSHLQEGEMETLSTSDWTTELLTVEQLLNSVATNNIYNVAADRIRHGEVQFHFYRRVAELLINHSQAPVPAWFRCLKILICLNHLILEPDLDDLLSSAWIDAEVTEFRTKKAQEMLIHTLFQTYAKLRQVPQLFEELLGVICRPAAEALRQPILASGPSMALCECLLELPPNQVLDTWLLVLEKFQSLVLPGLQSDTDMALKALSLSSLLHCIMFNMRSLDSSMPLPVIRRTQCMMEKMLGELVKPLLAFLLDPPNREPELWQKVCDSTFLLSYTWAQVDATFSLNCSQYCSVAGPLTGAALDVSDLPLLLPGVEIQHWKKVEKFMLQSSSLSRYCLEQLYLQKIKRTLLKIGSGSEETLQILKHDAAYILGLGRDSLNQGTTASWDGQIGTVSVSTYPIAHWHLIVSNLTVLIPCLCPDDVKYLATVLLRTLPRNKAQECLADEEPLITLEKVSTALLHSPLFPEMQSLHSAFLMCIAATCSGILCSGAHRDLDLLSQQLPWLFEKDNHTIEAYWETRFVKVGPESVEPRGEVAQNLLFFVKRDFPIQLEEGQLEGLLGLMEVISTLHLDSFSPLYHVHYFTLLLSMAVTTLRCSHSSLALQFLVTCYRLLCGLQRERSARSVFKVMYVSDIFELVLTSLLQASSGLLVEVDDSSWLQLLQEVGTFLEQLMQMLIQLKLSVVLNFGKIAAFLSRCKLYPETASSKQLKIQSPLGSQLLLVSLTKLCQVLGPFVSEQRQPQEASAVLPELLQQAMIQTGTVMQFCSTPGPGGCHLPSALLSAIATVLEVDLSQCPRDGGPNMAQMAERALPSRTALYQDVYTQLLSELVALAGNIPSFQAALRFLTLFFSAPDLHPKKGSVFASMFHSVRKLLADPDTSAQVTQDIESHLEALFTQMLEAGTMEDFGLVMQSILKGLDVSHAWRADLQAVLSAVRLLKLLLNCPLSREKASLLWRASPQIVTALTLQHREACQEQPVAVAVVGPILDVLAALLRQGEEAISNPHHVSLAFSILLTVPLDHLKPPEHGLIFLKMHNVLFSILQCHPKVMLKAIPSFLNSCNKLLFSVMHEGRQKDKGSMADLPMVLECARLVERMYSHIAARAEEFAMFSPFLLAEYVTEAQKVTLYPGVKDLLQGGIYLILDLCTEPNVQFLRASLQPGARDVFKELYSDYLKYHKSKQEGERRYTA
SIO_010081: Urb2
subclass of: SO_0000673
so part of: Urb2
location: join(326043..326168,327479..327655,329698..333025,336550..336710,338620..338730,339533..339775,340985..341072,344744..344883,348091..348288)
location: region:326043-348288:1
so has part: feature:326043-326168:1:exon
so has part: feature:327479-327655:1:exon
so has part: feature:329698-333025:1:exon
so has part: feature:336550-336710:1:exon
so has part: feature:338620-338730:1:exon
so has part: feature:339533-339775:1:exon
so has part: feature:340985-341072:1:exon
so has part: feature:344744-344883:1:exon
so has part: feature:348091-348288:1:exon

XP_048223792.1
type: Protein
SIO_000068: ncbiprotein

position:326043:1
position: 326043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348288:1
position: 348288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326043-326168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327479-327655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329698-333025:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:336550-336710:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338620-338730:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339533-339775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340985-341072:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:344744-344883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:348091-348288:1:exon

Urb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Urb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unhealthy ribosome biogenesis protein 2 homolog
translation: MAAVYSGISLKLKSKTTAWEDKLKLAHFAWISHQCFLPNKEQVLLDWASQSLVTFYKKKLELKEDVVERLWIYVDNIVHSRKLQSLLKKGKTVNLQVSLIKIINERITDFALSGHHGNICAVLHCCEGILSTPALAVIYTAKQELMVTLLSQLCWSACQQPEETVTTHLFKVIHLALGHYLLLQQQQANSRRVFGDMTGHLLQPCLILRHLLSGGVWTRAGQGQQWQVLSRDVRSQIEALLQGGIFRLDLLSSYKEELLDQQQSDKKMGALKNLLTPMDTVITRLMDIGDGKPDLHASVVASSVALLYRLFLDSYLKEGNQFLCFQALPKLFGCLQLSHLQEGEMETLSTSDWTTELLTVEQLLNSVATNNIYNVAADRIRHGEVQFHFYRRVAELLINHSQAPVPAWFRCLKILICLNHLILEPDLDDLLSSAWIDAEVTEFRTKKAQEMLIHTLFQTYAKLRQVPQLFEELLGVICRPAAEALRQPILASGPSMALCECLLELPPNQVLDTWLLVLEKFQSLVLPGLQSDTDMALKALSLSSLLHCIMFNMRSLDSSMPLPVIRRTQCMMEKMLGELVKPLLAFLLDPPNREPELWQKVCDSTFLLSYTWAQVDATFSLNCSQYCSVAGPLTGAALDVSDLPLLLPGVEIQHWKKVEKFMLQSSSLSRYCLEQLYLQKIKRTLLKIGSGSEETLQILKHDAAYILGLGRDSLNQGTTASWDGQIGTVSVSTYPIAHWHLIVSNLTVLIPCLCPDDVKYLATVLLRTLPRNKAQECLADEEPLITLEKVSTALLHSPLFPEMQSLHSAFLMCIAATCSGILCSGAHRDLDLLSQQLPWLFEKDNHTIEAYWETRFVKVGPESVEPRGEVAQNLLFFVKRDFPIQLEEGQLEGLLGLMEVISTLHLDSFSPLYHVHYFTLLLSMAVTTLRCSHSSLALQFLVTCYRLLCGLQRERSARSVFKVMYVSDIFELVLTSLLQASSGLLVEVDDSSWLQLLQEVGTFLEQLMQMLIQLKLSVVLNFGKIAAFLSRCKLYPETASSKQLKIQSPLGSQLLLVSLTKLCQVLGPFVSEQRQPQEASAVLPELLQQAMIQTGTVMQFCSTPGPGGCHLPSALLSAIATVLEVDLSQCPRDGGPNMAQMAERALPSRTALYQDVYTQLLSELVALAGNIPSFQAALRFLTLFFSAPDLHPKKGSVFASMFHSVRKLLADPDTSAQVTQDIESHLEALFTQMLEAGTMEDFGLVMQSILKGLDVSHAWRADLQAVLSAVRLLKLLLNCPLSREKASLLWRASPQIVTALTLQHREACQEQPVAVAVVGPILDVLAALLRQGEEAISNPHHVSLAFSILLTVPLDHLKPPEHGLIFLKMHNVLFSILQCHPKVMLKAIPSFLNSCNKLLFSVMHEGRQKDKGSMADLPMVLECARLVERMYSHIAARAEEFAMFSPFLLAEYVTEAQKVTLYPGVKDLLQGGIYLILDLCTEPNVQFLRASLQPGARDVFKELYSDYLKYHKSKQEGERRYTA
SIO_010081: Urb2
subclass of: SO_0000673
so part of: Urb2
location: join(326043..326168,327479..327655,329698..333025,336550..336710,338620..338730,339533..339775,340985..341072,344744..344883,348091..348288)
location: region:326043-348288:1
so has part: feature:326043-326168:1:exon
so has part: feature:327479-327655:1:exon
so has part: feature:329698-333025:1:exon
so has part: feature:336550-336710:1:exon
so has part: feature:338620-338730:1:exon
so has part: feature:339533-339775:1:exon
so has part: feature:340985-341072:1:exon
so has part: feature:344744-344883:1:exon
so has part: feature:348091-348288:1:exon

XP_048223793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326043-326168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327479-327655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329698-333025:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:336550-336710:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338620-338730:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339533-339775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340985-341072:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:344744-344883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:348091-348288:1:exon

Galnt2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Galnt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 478661..580430
location: region:478661-580430:1
so has part: feature:478661-580430:1:exon
subclass of: SO_0000010

125367278
type: Gene
SIO_000068: ncbigene

position:478661:1
position: 478661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580430:1
position: 580430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478661-580430:1:exon

Galnt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Galnt2
product: polypeptide N-acetylgalactosaminyltransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048367946.1
SIO_010081: Galnt2
subclass of: SO_0000673
so part of: Galnt2
location: join(478661..478883,526770..526863,538936..539089,552448..552546,552752..552819,553044..553109,555815..555936,557682..557769,559603..559690,561501..561604,566068..566194,569594..569686,569918..570001,572027..572153,576929..577048,579168..580430)
location: region:478661-580430:1
so has part: feature:478661-478883:1:exon
so has part: feature:526770-526863:1:exon
so has part: feature:538936-539089:1:exon
so has part: feature:552448-552546:1:exon
so has part: feature:552752-552819:1:exon
so has part: feature:553044-553109:1:exon
so has part: feature:555815-555936:1:exon
so has part: feature:557682-557769:1:exon
so has part: feature:559603-559690:1:exon
so has part: feature:561501-561604:1:exon
so has part: feature:566068-566194:1:exon
so has part: feature:569594-569686:1:exon
so has part: feature:569918-570001:1:exon
so has part: feature:572027-572153:1:exon
so has part: feature:576929-577048:1:exon
so has part: feature:579168-580430:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:478661-478883:1:exon

position:478883:1
position: 478883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:526770-526863:1:exon

position:526770:1
position: 526770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526863:1
position: 526863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:538936-539089:1:exon

position:538936:1
position: 538936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539089:1
position: 539089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552448-552546:1:exon

position:552448:1
position: 552448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552546:1
position: 552546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:552752-552819:1:exon

position:552752:1
position: 552752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552819:1
position: 552819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:553044-553109:1:exon

position:553044:1
position: 553044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553109:1
position: 553109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:555815-555936:1:exon

position:555815:1
position: 555815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555936:1
position: 555936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:557682-557769:1:exon

position:557682:1
position: 557682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557769:1
position: 557769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:559603-559690:1:exon

position:559603:1
position: 559603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559690:1
position: 559690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:561501-561604:1:exon

position:561501:1
position: 561501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561604:1
position: 561604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:566068-566194:1:exon

position:566068:1
position: 566068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566194:1
position: 566194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:569594-569686:1:exon

position:569594:1
position: 569594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569686:1
position: 569686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:569918-570001:1:exon

position:569918:1
position: 569918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570001:1
position: 570001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:572027-572153:1:exon

position:572027:1
position: 572027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572153:1
position: 572153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:576929-577048:1:exon

position:576929:1
position: 576929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577048:1
position: 577048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:579168-580430:1:exon

position:579168:1
position: 579168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Galnt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Galnt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase 2
translation: MRRRSRMLLCFALLWVLGIAYYMYSGGGSALAAGAGGAAARKEDWNEIDSIKKKDLHHSNGDEKAQSVETLPPGKVRWPDFNQEAYVGGTMVRSGQDPYARNKFNQVESDKLRMDRSIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKRSPPHLIREIILVDDYSSDPEDGALLGKIEKVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFEWNLVFKWDYMTPEQRRARQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKKLSCKPFKWYLENVYPELRVPDHQDIAFGALQQGTNCLDTLGHFADGVVGIYECHNAGGNQEWALTKEKSVKHMDLCLTVVDRVPGSLIRLQGCRENDSRQKWEQIEGNSKLRHVGSNLCLDSRAAKSGGLRVEVCGPALSQQWKFSLNLQQ
SIO_010081: Galnt2
subclass of: SO_0000673
so part of: Galnt2
location: join(478758..478883,526770..526863,538936..539089,552448..552546,552752..552819,553044..553109,555815..555936,557682..557769,559603..559690,561501..561604,566068..566194,569594..569686,569918..570001,572027..572153,576929..577048,579168..579323)
location: region:478758-579323:1
so has part: feature:478758-478883:1:exon
so has part: feature:526770-526863:1:exon
so has part: feature:538936-539089:1:exon
so has part: feature:552448-552546:1:exon
so has part: feature:552752-552819:1:exon
so has part: feature:553044-553109:1:exon
so has part: feature:555815-555936:1:exon
so has part: feature:557682-557769:1:exon
so has part: feature:559603-559690:1:exon
so has part: feature:561501-561604:1:exon
so has part: feature:566068-566194:1:exon
so has part: feature:569594-569686:1:exon
so has part: feature:569918-570001:1:exon
so has part: feature:572027-572153:1:exon
so has part: feature:576929-577048:1:exon
so has part: feature:579168-579323:1:exon

XP_048223903.1
type: Protein
SIO_000068: ncbiprotein

position:478758:1
position: 478758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579323:1
position: 579323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478758-478883:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526770-526863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538936-539089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552448-552546:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552752-552819:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:553044-553109:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555815-555936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557682-557769:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:559603-559690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:561501-561604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:566068-566194:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:569594-569686:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:569918-570001:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:572027-572153:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:576929-577048:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:579168-579323:1:exon

LOC125367280
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 508260..512339
location: region:508260-512339:1
so has part: feature:508260-512339:1:exon
subclass of: SO_0000011

125367280
type: Gene
SIO_000068: ncbigene

position:508260:1
position: 508260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512339:1
position: 512339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508260-512339:1:exon

LOC125367280
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125367280
product: uncharacterized LOC125367280
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007214037.1
SIO_010081: LOC125367280
subclass of: SO_0000673
so part of: LOC125367280
location: join(508260..508761,508837..509828,510046..512339)
location: region:508260-512339:1
so has part: feature:508260-508761:1:exon
so has part: feature:508837-509828:1:exon
so has part: feature:510046-512339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:508260-508761:1:exon

position:508761:1
position: 508761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:508837-509828:1:exon

position:508837:1
position: 508837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509828:1
position: 509828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:510046-512339:1:exon

position:510046:1
position: 510046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pgbd5
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Pgbd5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(593395..627241)
location: region:593395-627241:-1
so has part: feature:593395-627241:-1:exon
subclass of: SO_0000010

125366831
type: Gene
SIO_000068: ncbigene

position:593395:-1
position: 593395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627241:-1
position: 627241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593395-627241:-1:exon

Pgbd5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pgbd5
product: piggyBac transposable element derived 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048367553.1
SIO_010081: Pgbd5
subclass of: SO_0000673
so part of: Pgbd5
location: complement(join(593395..593664,594688..594790,595943..596140,597799..597979,599729..599863,602193..602620,626902..627241))
location: region:593395-627241:-1
so has part: feature:626902-627241:-1:exon
so has part: feature:602193-602620:-1:exon
so has part: feature:599729-599863:-1:exon
so has part: feature:597799-597979:-1:exon
so has part: feature:595943-596140:-1:exon
so has part: feature:594688-594790:-1:exon
so has part: feature:593395-593664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:626902-627241:-1:exon

position:626902:-1
position: 626902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:602193-602620:-1:exon

position:602193:-1
position: 602193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602620:-1
position: 602620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:599729-599863:-1:exon

position:599729:-1
position: 599729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599863:-1
position: 599863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:597799-597979:-1:exon

position:597799:-1
position: 597799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597979:-1
position: 597979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:595943-596140:-1:exon

position:595943:-1
position: 595943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596140:-1
position: 596140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:594688-594790:-1:exon

position:594688:-1
position: 594688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594790:-1
position: 594790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:593395-593664:-1:exon

position:593664:-1
position: 593664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pgbd5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pgbd5
product: piggyBac transposable element derived 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048367554.1
SIO_010081: Pgbd5
subclass of: SO_0000673
so part of: Pgbd5
location: complement(join(593411..593664,594688..594790,595943..596140,597799..597979,599729..599863,602193..602620,605859..605886))
location: region:593411-605886:-1
so has part: feature:605859-605886:-1:exon
so has part: feature:602193-602620:-1:exon
so has part: feature:599729-599863:-1:exon
so has part: feature:597799-597979:-1:exon
so has part: feature:595943-596140:-1:exon
so has part: feature:594688-594790:-1:exon
so has part: feature:593411-593664:-1:exon

position:593411:-1
position: 593411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605886:-1
position: 605886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605859-605886:-1:exon

position:605859:-1
position: 605859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:602193-602620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:599729-599863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:597799-597979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595943-596140:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:594688-594790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:593411-593664:-1:exon

Pgbd5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Pgbd5
product: piggyBac transposable element derived 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048367555.1
SIO_010081: Pgbd5
subclass of: SO_0000673
so part of: Pgbd5
location: complement(join(593411..593664,594688..594790,595943..596140,597799..597979,599729..599863,602193..602620,605192..605276))
location: region:593411-605276:-1
so has part: feature:605192-605276:-1:exon
so has part: feature:602193-602620:-1:exon
so has part: feature:599729-599863:-1:exon
so has part: feature:597799-597979:-1:exon
so has part: feature:595943-596140:-1:exon
so has part: feature:594688-594790:-1:exon
so has part: feature:593411-593664:-1:exon

position:605276:-1
position: 605276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605192-605276:-1:exon

position:605192:-1
position: 605192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:602193-602620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:599729-599863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:597799-597979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595943-596140:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:594688-594790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:593411-593664:-1:exon

Pgbd5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pgbd5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: piggyBac transposable element-derived protein 5 isoform X1
translation: MAEGGAGARRRAPALLEAARARYESLHISDDVFGESGADSGGNPFYSTSAASHSSSAASSDDERERPAPPGATPLPPPPPGAPAPAEPEEDEACAGWSAALRDRPSPRFEDTGGPTRKMPPGARAVDFFQLFVPDNALKSMVAQTNMYARKFQERFGSDSAWVEVTLAEMKAFLGYVISTSVSHCESVLSIWSSGFYSNRSLALVMSQARFEKILKYFHVVAFRSSQTTHGLYKVQPFLDSLQSSFDAAFRPSQTQVLHEPLIDEDPVFIATCTERELRKRKKRKFSLWVRQCSATGFIIQIYVHLKEGGGADGLDALKNKPQLHGTVARSLCRNAAGKNYIIFTGPSITSLALFEEFEKQGIYCCGLLSSRKSDCTGLPPSMLTNPATPLARGQHQIKTKGNMSLICWYNKGHFRFLTNAYSPVQQGVIVKRRGEIPCPLAVEAFAAHLGYICRYDDKYSRYFISHKPNKTWQQVFWFAISIAVNNAYILYKMSDAYHVKRYSRAQFGERLVRELLGLEDASPAH
SIO_010081: Pgbd5
subclass of: SO_0000673
so part of: Pgbd5
location: complement(join(593469..593664,594688..594790,595943..596140,597799..597979,599729..599863,602193..602620,626902..627241))
location: region:593469-627241:-1
so has part: feature:626902-627241:-1:exon
so has part: feature:602193-602620:-1:exon
so has part: feature:599729-599863:-1:exon
so has part: feature:597799-597979:-1:exon
so has part: feature:595943-596140:-1:exon
so has part: feature:594688-594790:-1:exon
so has part: feature:593469-593664:-1:exon

XP_048223510.1
type: Protein
SIO_000068: ncbiprotein

position:593469:-1
position: 593469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626902-627241:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602193-602620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:599729-599863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:597799-597979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595943-596140:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:594688-594790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:593469-593664:-1:exon

Pgbd5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pgbd5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: piggyBac transposable element-derived protein 5 isoform X2
translation: MPPGARAVDFFQLFVPDNALKSMVAQTNMYARKFQERFGSDSAWVEVTLAEMKAFLGYVISTSVSHCESVLSIWSSGFYSNRSLALVMSQARFEKILKYFHVVAFRSSQTTHGLYKVQPFLDSLQSSFDAAFRPSQTQVLHEPLIDEDPVFIATCTERELRKRKKRKFSLWVRQCSATGFIIQIYVHLKEGGGADGLDALKNKPQLHGTVARSLCRNAAGKNYIIFTGPSITSLALFEEFEKQGIYCCGLLSSRKSDCTGLPPSMLTNPATPLARGQHQIKTKGNMSLICWYNKGHFRFLTNAYSPVQQGVIVKRRGEIPCPLAVEAFAAHLGYICRYDDKYSRYFISHKPNKTWQQVFWFAISIAVNNAYILYKMSDAYHVKRYSRAQFGERLVRELLGLEDASPAH
SIO_010081: Pgbd5
subclass of: SO_0000673
so part of: Pgbd5
location: complement(join(593469..593664,594688..594790,595943..596140,597799..597979,599729..599863,602193..602606))
location: region:593469-602606:-1
so has part: feature:602193-602606:-1:exon
so has part: feature:599729-599863:-1:exon
so has part: feature:597799-597979:-1:exon
so has part: feature:595943-596140:-1:exon
so has part: feature:594688-594790:-1:exon
so has part: feature:593469-593664:-1:exon

XP_048223511.1
type: Protein
SIO_000068: ncbiprotein

position:602606:-1
position: 602606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602193-602606:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599729-599863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:597799-597979:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595943-596140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:594688-594790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593469-593664:-1:exon

Pgbd5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Pgbd5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: piggyBac transposable element-derived protein 5 isoform X2
translation: MPPGARAVDFFQLFVPDNALKSMVAQTNMYARKFQERFGSDSAWVEVTLAEMKAFLGYVISTSVSHCESVLSIWSSGFYSNRSLALVMSQARFEKILKYFHVVAFRSSQTTHGLYKVQPFLDSLQSSFDAAFRPSQTQVLHEPLIDEDPVFIATCTERELRKRKKRKFSLWVRQCSATGFIIQIYVHLKEGGGADGLDALKNKPQLHGTVARSLCRNAAGKNYIIFTGPSITSLALFEEFEKQGIYCCGLLSSRKSDCTGLPPSMLTNPATPLARGQHQIKTKGNMSLICWYNKGHFRFLTNAYSPVQQGVIVKRRGEIPCPLAVEAFAAHLGYICRYDDKYSRYFISHKPNKTWQQVFWFAISIAVNNAYILYKMSDAYHVKRYSRAQFGERLVRELLGLEDASPAH
SIO_010081: Pgbd5
subclass of: SO_0000673
so part of: Pgbd5
location: complement(join(593469..593664,594688..594790,595943..596140,597799..597979,599729..599863,602193..602606))
location: region:593469-602606:-1
so has part: feature:602193-602606:-1:exon
so has part: feature:599729-599863:-1:exon
so has part: feature:597799-597979:-1:exon
so has part: feature:595943-596140:-1:exon
so has part: feature:594688-594790:-1:exon
so has part: feature:593469-593664:-1:exon

XP_048223512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:602193-602606:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599729-599863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:597799-597979:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595943-596140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:594688-594790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593469-593664:-1:exon

Cog2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Cog2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 668525..698468
location: region:668525-698468:1
so has part: feature:668525-698468:1:exon
subclass of: SO_0000010

125366849
type: Gene
SIO_000068: ncbigene

position:668525:1
position: 668525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698468:1
position: 698468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668525-698468:1:exon

Cog2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cog2
product: component of oligomeric golgi complex 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367573.1
SIO_010081: Cog2
subclass of: SO_0000673
so part of: Cog2
location: join(668525..668693,671373..671534,671758..671823,674104..674184,676808..676911,679692..679800,680635..680814,682774..682898,685755..685881,688153..688292,689752..689813,691293..691444,691827..692024,692892..692964,693506..693648,695346..695485,696296..696476,697903..698468)
location: region:668525-698468:1
so has part: feature:668525-668693:1:exon
so has part: feature:671373-671534:1:exon
so has part: feature:671758-671823:1:exon
so has part: feature:674104-674184:1:exon
so has part: feature:676808-676911:1:exon
so has part: feature:679692-679800:1:exon
so has part: feature:680635-680814:1:exon
so has part: feature:682774-682898:1:exon
so has part: feature:685755-685881:1:exon
so has part: feature:688153-688292:1:exon
so has part: feature:689752-689813:1:exon
so has part: feature:691293-691444:1:exon
so has part: feature:691827-692024:1:exon
so has part: feature:692892-692964:1:exon
so has part: feature:693506-693648:1:exon
so has part: feature:695346-695485:1:exon
so has part: feature:696296-696476:1:exon
so has part: feature:697903-698468:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:668525-668693:1:exon

position:668693:1
position: 668693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:671373-671534:1:exon

position:671373:1
position: 671373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671534:1
position: 671534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:671758-671823:1:exon

position:671758:1
position: 671758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671823:1
position: 671823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:674104-674184:1:exon

position:674104:1
position: 674104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674184:1
position: 674184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:676808-676911:1:exon

position:676808:1
position: 676808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676911:1
position: 676911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:679692-679800:1:exon

position:679692:1
position: 679692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679800:1
position: 679800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:680635-680814:1:exon

position:680635:1
position: 680635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680814:1
position: 680814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:682774-682898:1:exon

position:682774:1
position: 682774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682898:1
position: 682898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:685755-685881:1:exon

position:685755:1
position: 685755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685881:1
position: 685881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:688153-688292:1:exon

position:688153:1
position: 688153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688292:1
position: 688292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:689752-689813:1:exon

position:689752:1
position: 689752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689813:1
position: 689813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:691293-691444:1:exon

position:691293:1
position: 691293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691444:1
position: 691444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:691827-692024:1:exon

position:691827:1
position: 691827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692024:1
position: 692024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:692892-692964:1:exon

position:692892:1
position: 692892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692964:1
position: 692964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:693506-693648:1:exon

position:693506:1
position: 693506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693648:1
position: 693648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:695346-695485:1:exon

position:695346:1
position: 695346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695485:1
position: 695485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:696296-696476:1:exon

position:696296:1
position: 696296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696476:1
position: 696476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:697903-698468:1:exon

position:697903:1
position: 697903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cog2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cog2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: conserved oligomeric Golgi complex subunit 2
translation: MERRRMNLPSGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKICMLRLIQVIRSVEKIEKILNSQDSKETSTLEASSPLLTGQILERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAVLQQSLEGLLLEGLQTSSVDIIRHCLRTYATIDKTRDAEALVGQVLVKPYVDKVISGHTAESQPSGLQLMYDKLLEFVPHHCRLLREVTGGAVSSEKGTVVPGYDFLVNSVWPEVVRGLEEKLPSLFNPGDPDVFHEKYTISMGFVRGFEQQCGSQASVKRLRAHPAYCSFSNKWNLPVYFQIRFREVAGSLEAAFADGLADAPAGSPYCLLASHRTWSSLRKCWSDKMFLPLLAHRLWRLTLQILARFSVFIKELSLRPISNEIAKEVKKPSVIGSKDPSTAQGTGEDQGGGPSEARPLGSISSMQLVYVAADLHRLQEQLPELLEIIKPKLEMIGFDNFSSISAALEDSQSALSACMPAVSSKIVQDLSESCFSCLKSAQEVPRLYRRTNKEVPAAASSYVDSALRPLHQLQSAHKDRLRPAVMEQWLRQALCESTHKYFETVSDVLNSVKKMEESLKRLKQARRSAATNPAGPSGGMSDDDKIRLQLALDVEYLGQQIQKMGLQTGDIDSFPELAELVLAAKDPAAADQP
SIO_010081: Cog2
subclass of: SO_0000673
so part of: Cog2
location: join(668622..668693,671373..671534,671758..671823,674104..674184,676808..676911,679692..679800,680635..680814,682774..682898,685755..685881,688153..688292,689752..689813,691293..691444,691827..692024,692892..692964,693506..693648,695346..695485,696296..696476,697903..698004)
location: region:668622-698004:1
so has part: feature:668622-668693:1:exon
so has part: feature:671373-671534:1:exon
so has part: feature:671758-671823:1:exon
so has part: feature:674104-674184:1:exon
so has part: feature:676808-676911:1:exon
so has part: feature:679692-679800:1:exon
so has part: feature:680635-680814:1:exon
so has part: feature:682774-682898:1:exon
so has part: feature:685755-685881:1:exon
so has part: feature:688153-688292:1:exon
so has part: feature:689752-689813:1:exon
so has part: feature:691293-691444:1:exon
so has part: feature:691827-692024:1:exon
so has part: feature:692892-692964:1:exon
so has part: feature:693506-693648:1:exon
so has part: feature:695346-695485:1:exon
so has part: feature:696296-696476:1:exon
so has part: feature:697903-698004:1:exon

XP_048223530.1
type: Protein
SIO_000068: ncbiprotein

position:668622:1
position: 668622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698004:1
position: 698004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668622-668693:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671373-671534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671758-671823:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:674104-674184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676808-676911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:679692-679800:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680635-680814:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682774-682898:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:685755-685881:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:688153-688292:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:689752-689813:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:691293-691444:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:691827-692024:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:692892-692964:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:693506-693648:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:695346-695485:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:696296-696476:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:697903-698004:1:exon

LOC125366850
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125366850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 674193..674505
location: region:674193-674505:1
so has part: feature:674193-674505:1:exon
subclass of: SO_0000011

125366850
type: Gene
SIO_000068: ncbigene

position:674193:1
position: 674193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674505:1
position: 674505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674193-674505:1:exon

LOC125366850
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125366850
product: uncharacterized LOC125366850
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007213984.1
SIO_010081: LOC125366850
subclass of: SO_0000673
so part of: LOC125366850
location: join(674193..674381,674431..674505)
location: region:674193-674505:1
so has part: feature:674193-674381:1:exon
so has part: feature:674431-674505:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:674193-674381:1:exon

position:674381:1
position: 674381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:674431-674505:1:exon

position:674431:1
position: 674431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Agt
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Agt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(702073..709839)
location: region:702073-709839:-1
so has part: feature:702073-709839:-1:exon
subclass of: SO_0000010

125367128
type: Gene
SIO_000068: ncbigene

position:702073:-1
position: 702073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709839:-1
position: 709839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702073-709839:-1:exon

Agt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Agt
product: angiotensinogen, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367753.1
SIO_010081: Agt
subclass of: SO_0000673
so part of: Agt
location: complement(join(702073..702641,703205..703349,705081..705348,707057..707908,709689..709839))
location: region:702073-709839:-1
so has part: feature:709689-709839:-1:exon
so has part: feature:707057-707908:-1:exon
so has part: feature:705081-705348:-1:exon
so has part: feature:703205-703349:-1:exon
so has part: feature:702073-702641:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:709689-709839:-1:exon

position:709689:-1
position: 709689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:707057-707908:-1:exon

position:707057:-1
position: 707057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707908:-1
position: 707908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:705081-705348:-1:exon

position:705081:-1
position: 705081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705348:-1
position: 705348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:703205-703349:-1:exon

position:703205:-1
position: 703205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703349:-1
position: 703349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:702073-702641:-1:exon

position:702641:-1
position: 702641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Agt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Agt
product: angiotensinogen, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367754.1
SIO_010081: Agt
subclass of: SO_0000673
so part of: Agt
location: complement(join(702073..702641,703205..703349,705081..705348,707057..707911,709607..709673))
location: region:702073-709673:-1
so has part: feature:709607-709673:-1:exon
so has part: feature:707057-707911:-1:exon
so has part: feature:705081-705348:-1:exon
so has part: feature:703205-703349:-1:exon
so has part: feature:702073-702641:-1:exon

position:709673:-1
position: 709673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709607-709673:-1:exon

position:709607:-1
position: 709607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:707057-707911:-1:exon

position:707911:-1
position: 707911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:705081-705348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703205-703349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:702073-702641:-1:exon

Agt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Agt
product: angiotensinogen, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367755.1
SIO_010081: Agt
subclass of: SO_0000673
so part of: Agt
location: complement(join(702073..702641,703205..703349,705081..705348,707057..707908,708314..708334))
location: region:702073-708334:-1
so has part: feature:708314-708334:-1:exon
so has part: feature:707057-707908:-1:exon
so has part: feature:705081-705348:-1:exon
so has part: feature:703205-703349:-1:exon
so has part: feature:702073-702641:-1:exon

position:708334:-1
position: 708334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708314-708334:-1:exon

position:708314:-1
position: 708314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:707057-707908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:705081-705348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703205-703349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:702073-702641:-1:exon

Agt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Agt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiotensinogen
translation: MAPATLGLKATVLCLLTWVSLVAGDRIYVHPFHFLFYSKSSCEQLEKSNAETATEPTFAPTPIQAKASPVDEEGLRDQLALAAGKLEAEQKLQAAEVGMMANFMGFRMYKMLSEAGGTPGGAVLSPTAVFGTLASFYSGSVDPTASQLQAFLGVPGQDQDCTSRLDGHKVLSALQALQGLLVAQGEASGQPHLLLSTVVGLFTAPGLRLKQPFVKGLAPFAPVVLSRSLDLSSPELAAEKINRFMQAVTGWKMNGLAGVSGDSTMLFNTYVHFQGRMKGFSLLPEPQDFQVDNSTRVSVRMLSGTGTFQHWSDPQNNVSLTRVPVGESASLLLIQPRWASDLDRVQALAFHHDLFTWMKNLSPRTIRLTLPQLELQGAYDLQALLAQAKLPTLLGPQAALDRISDTDVRVGEVLNSVLFELRGDEGEQPPESAQPSDVPEALEVVTLNSPFLFAVHERDSGALHFLGRVDSPPSVA
SIO_010081: Agt
subclass of: SO_0000673
so part of: Agt
location: complement(join(702447..702641,703205..703349,705081..705348,707057..707879))
location: region:702447-707879:-1
so has part: feature:707057-707879:-1:exon
so has part: feature:705081-705348:-1:exon
so has part: feature:703205-703349:-1:exon
so has part: feature:702447-702641:-1:exon

XP_048223710.1
type: Protein
SIO_000068: ncbiprotein

position:702447:-1
position: 702447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707879:-1
position: 707879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707057-707879:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705081-705348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:703205-703349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702447-702641:-1:exon

Agt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Agt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiotensinogen
translation: MAPATLGLKATVLCLLTWVSLVAGDRIYVHPFHFLFYSKSSCEQLEKSNAETATEPTFAPTPIQAKASPVDEEGLRDQLALAAGKLEAEQKLQAAEVGMMANFMGFRMYKMLSEAGGTPGGAVLSPTAVFGTLASFYSGSVDPTASQLQAFLGVPGQDQDCTSRLDGHKVLSALQALQGLLVAQGEASGQPHLLLSTVVGLFTAPGLRLKQPFVKGLAPFAPVVLSRSLDLSSPELAAEKINRFMQAVTGWKMNGLAGVSGDSTMLFNTYVHFQGRMKGFSLLPEPQDFQVDNSTRVSVRMLSGTGTFQHWSDPQNNVSLTRVPVGESASLLLIQPRWASDLDRVQALAFHHDLFTWMKNLSPRTIRLTLPQLELQGAYDLQALLAQAKLPTLLGPQAALDRISDTDVRVGEVLNSVLFELRGDEGEQPPESAQPSDVPEALEVVTLNSPFLFAVHERDSGALHFLGRVDSPPSVA
SIO_010081: Agt
subclass of: SO_0000673
so part of: Agt
location: complement(join(702447..702641,703205..703349,705081..705348,707057..707879))
location: region:702447-707879:-1
so has part: feature:707057-707879:-1:exon
so has part: feature:705081-705348:-1:exon
so has part: feature:703205-703349:-1:exon
so has part: feature:702447-702641:-1:exon

XP_048223711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:707057-707879:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705081-705348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:703205-703349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702447-702641:-1:exon

Agt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Agt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiotensinogen
translation: MAPATLGLKATVLCLLTWVSLVAGDRIYVHPFHFLFYSKSSCEQLEKSNAETATEPTFAPTPIQAKASPVDEEGLRDQLALAAGKLEAEQKLQAAEVGMMANFMGFRMYKMLSEAGGTPGGAVLSPTAVFGTLASFYSGSVDPTASQLQAFLGVPGQDQDCTSRLDGHKVLSALQALQGLLVAQGEASGQPHLLLSTVVGLFTAPGLRLKQPFVKGLAPFAPVVLSRSLDLSSPELAAEKINRFMQAVTGWKMNGLAGVSGDSTMLFNTYVHFQGRMKGFSLLPEPQDFQVDNSTRVSVRMLSGTGTFQHWSDPQNNVSLTRVPVGESASLLLIQPRWASDLDRVQALAFHHDLFTWMKNLSPRTIRLTLPQLELQGAYDLQALLAQAKLPTLLGPQAALDRISDTDVRVGEVLNSVLFELRGDEGEQPPESAQPSDVPEALEVVTLNSPFLFAVHERDSGALHFLGRVDSPPSVA
SIO_010081: Agt
subclass of: SO_0000673
so part of: Agt
location: complement(join(702447..702641,703205..703349,705081..705348,707057..707879))
location: region:702447-707879:-1
so has part: feature:707057-707879:-1:exon
so has part: feature:705081-705348:-1:exon
so has part: feature:703205-703349:-1:exon
so has part: feature:702447-702641:-1:exon

XP_048223712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:707057-707879:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705081-705348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:703205-703349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702447-702641:-1:exon

Capn9
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Capn9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 729650..748745
location: region:729650-748745:1
so has part: feature:729650-748745:1:exon
subclass of: SO_0000010

125366829
type: Gene
SIO_000068: ncbigene

position:729650:1
position: 729650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748745:1
position: 748745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729650-748745:1:exon

Capn9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Capn9
product: calpain 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048367551.1
SIO_010081: Capn9
subclass of: SO_0000673
so part of: Capn9
location: join(729650..729862,730881..730950,732029..732147,732847..732980,733339..733507,734320..734403,734720..734805,736648..736725,737353..737513,738384..738541,738900..739108,740160..740196,740856..740936,741663..741720,744791..744855,745145..745213,746177..746256,748624..748745)
location: region:729650-748745:1
so has part: feature:729650-729862:1:exon
so has part: feature:730881-730950:1:exon
so has part: feature:732029-732147:1:exon
so has part: feature:732847-732980:1:exon
so has part: feature:733339-733507:1:exon
so has part: feature:734320-734403:1:exon
so has part: feature:734720-734805:1:exon
so has part: feature:736648-736725:1:exon
so has part: feature:737353-737513:1:exon
so has part: feature:738384-738541:1:exon
so has part: feature:738900-739108:1:exon
so has part: feature:740160-740196:1:exon
so has part: feature:740856-740936:1:exon
so has part: feature:741663-741720:1:exon
so has part: feature:744791-744855:1:exon
so has part: feature:745145-745213:1:exon
so has part: feature:746177-746256:1:exon
so has part: feature:748624-748745:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:729650-729862:1:exon

position:729862:1
position: 729862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:730881-730950:1:exon

position:730881:1
position: 730881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730950:1
position: 730950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:732029-732147:1:exon

position:732029:1
position: 732029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732147:1
position: 732147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:732847-732980:1:exon

position:732847:1
position: 732847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732980:1
position: 732980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:733339-733507:1:exon

position:733339:1
position: 733339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733507:1
position: 733507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:734320-734403:1:exon

position:734320:1
position: 734320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734403:1
position: 734403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:734720-734805:1:exon

position:734720:1
position: 734720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734805:1
position: 734805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:736648-736725:1:exon

position:736648:1
position: 736648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736725:1
position: 736725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:737353-737513:1:exon

position:737353:1
position: 737353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737513:1
position: 737513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:738384-738541:1:exon

position:738384:1
position: 738384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738541:1
position: 738541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:738900-739108:1:exon

position:738900:1
position: 738900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739108:1
position: 739108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:740160-740196:1:exon

position:740160:1
position: 740160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740196:1
position: 740196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:740856-740936:1:exon

position:740856:1
position: 740856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740936:1
position: 740936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:741663-741720:1:exon

position:741663:1
position: 741663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741720:1
position: 741720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:744791-744855:1:exon

position:744791:1
position: 744791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744855:1
position: 744855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:745145-745213:1:exon

position:745145:1
position: 745145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745213:1
position: 745213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:746177-746256:1:exon

position:746177:1
position: 746177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746256:1
position: 746256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:748624-748745:1:exon

position:748624:1
position: 748624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Capn9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Capn9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calpain-9
translation: MPYLHRAAGPQAHPVPRDARPTHSSGQSFEELRQGCLRAGMLFEDADFPASNASLFYSERPQVPFVWKRPGEIVENPEFILGGATRTDICQGELGDCWLLAAIASLTLNEKALARVVPQDQSFGPGYAGIFHFQFWQHSEWLDVVIDDRLPTFRGRLVFLHSADHNEFWSALLEKAYAKLNGSYEALKGGSAIEAMEDFTGGVSENFQTREAPEDLYTILGKALKRGSLLSCSIDVRNAADSEARTPLGLIKGHAYTVTGIDQVNFRGQKTQLIRVRNPWGQVEWNGSWSDSSPEWRAADPAEQKRLCHTALDDGEFWMAFEDFKAHFDQVEICNLTPDALEDDALHRWEVTVHQGRWVRGATAGGCRNFLDTFWTNPQIKLSLTERDEGGEGCSVLVALMQKDRRKLGRSGGRLLTIGYAIYQCPGPAGHLGRDFFRCHASLARSRTFVNLREVAGRFCLPPGEYVLVPSTFEPHQEADFCLRIFSEKKAVTWDLDGSVDVELPGPPKLTPPEQEEEEEEQLRALFQHIAGEDMEVTAEELQCVLNAVLPKRKGLRFKPLSVLACRHIVALMDTSGNGKLEFGEFRVFWDKLTQWTNLFLRFDVDGSGTMSSYELRAALGSCRLPAERPPPAAGCDQVCRRGAAAGLPRLPPLPGSPGEREP
SIO_010081: Capn9
subclass of: SO_0000673
so part of: Capn9
location: join(729650..729862,730881..730950,732029..732147,732847..732980,733339..733507,734320..734403,734720..734805,736648..736725,737353..737513,738384..738541,738900..739108,740160..740196,740856..740936,741663..741720,744791..744855,745145..745213,746177..746256,748624..748744)
location: region:729650-748744:1
so has part: feature:729650-729862:1:exon
so has part: feature:730881-730950:1:exon
so has part: feature:732029-732147:1:exon
so has part: feature:732847-732980:1:exon
so has part: feature:733339-733507:1:exon
so has part: feature:734320-734403:1:exon
so has part: feature:734720-734805:1:exon
so has part: feature:736648-736725:1:exon
so has part: feature:737353-737513:1:exon
so has part: feature:738384-738541:1:exon
so has part: feature:738900-739108:1:exon
so has part: feature:740160-740196:1:exon
so has part: feature:740856-740936:1:exon
so has part: feature:741663-741720:1:exon
so has part: feature:744791-744855:1:exon
so has part: feature:745145-745213:1:exon
so has part: feature:746177-746256:1:exon
so has part: feature:748624-748744:1:exon

XP_048223508.1
type: Protein
SIO_000068: ncbiprotein

position:748744:1
position: 748744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729650-729862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730881-730950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:732029-732147:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:732847-732980:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:733339-733507:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:734320-734403:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:734720-734805:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:736648-736725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:737353-737513:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:738384-738541:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:738900-739108:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:740160-740196:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:740856-740936:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:741663-741720:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:744791-744855:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:745145-745213:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:746177-746256:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:748624-748744:1:exon

LOC125366738
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125366738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(759112..784923)
location: region:759112-784923:-1
so has part: feature:759112-784923:-1:exon
subclass of: SO_0000011

125366738
type: Gene
SIO_000068: ncbigene

position:759112:-1
position: 759112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784923:-1
position: 784923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759112-784923:-1:exon

LOC125366738
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125366738
product: uncharacterized LOC125366738
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007213964.1
SIO_010081: LOC125366738
subclass of: SO_0000673
so part of: LOC125366738
location: complement(join(759112..759603,784765..784923))
location: region:759112-784923:-1
so has part: feature:784765-784923:-1:exon
so has part: feature:759112-759603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784765-784923:-1:exon

position:784765:-1
position: 784765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:759112-759603:-1:exon

position:759603:-1
position: 759603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C18H1orf198
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: C18H1orf198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(760161..778479)
location: region:760161-778479:-1
so has part: feature:760161-778479:-1:exon
subclass of: SO_0000010

125366734
type: Gene
SIO_000068: ncbigene

position:760161:-1
position: 760161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778479:-1
position: 778479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760161-778479:-1:exon

C18H1orf198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: C18H1orf198
product: chromosome 18 C1orf198 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048367433.1
SIO_010081: C18H1orf198
subclass of: SO_0000673
so part of: C18H1orf198
location: complement(join(760161..761343,762309..762806,769776..769826,778144..778479))
location: region:760161-778479:-1
so has part: feature:778144-778479:-1:exon
so has part: feature:769776-769826:-1:exon
so has part: feature:762309-762806:-1:exon
so has part: feature:760161-761343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:778144-778479:-1:exon

position:778144:-1
position: 778144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:769776-769826:-1:exon

position:769776:-1
position: 769776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769826:-1
position: 769826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:762309-762806:-1:exon

position:762309:-1
position: 762309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762806:-1
position: 762806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:760161-761343:-1:exon

position:761343:-1
position: 761343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C18H1orf198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: C18H1orf198
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein C1orf198 homolog
translation: MASMAAAIAASRSAVMSGNRPLDERERKRFTYFSSLSPMXRKIMQDKEKIREKYGPEWARLPPAQQDEVIDRCLLGPRAPPAADAGDPGRFPGPRGPTGQKLVRFGDEDLTWQDEHSAPFSWETRSQMEFSISSLSIQEPGVGAPVGEPPRPPAKTSQGVPGLKPPQGSRSSSLDALGPGRKEEEAAFWKVNAERSREGAEAEFQSLTPSQIKSLEKAEKALPSCYWQDPAPKDREAEAAPPEQAPPGAEEQERPRALQAPADAEPLGKPSPPSPRLEDEDPLFSEPALAQVGSSTVVLKTGFDFLDNW
SIO_010081: C18H1orf198
subclass of: SO_0000673
so part of: C18H1orf198
location: complement(join(761287..761343,762309..762806,769776..769826,778144..778466))
location: region:761287-778466:-1
so has part: feature:778144-778466:-1:exon
so has part: feature:769776-769826:-1:exon
so has part: feature:762309-762806:-1:exon
so has part: feature:761287-761343:-1:exon

XP_048223390.1
type: Protein
SIO_000068: ncbiprotein

position:761287:-1
position: 761287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778466:-1
position: 778466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778144-778466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:769776-769826:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:762309-762806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761287-761343:-1:exon

LOC125366735
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125366735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(786472..803605)
location: region:786472-803605:-1
so has part: feature:786472-803605:-1:exon
subclass of: SO_0000010

125366735
type: Gene
SIO_000068: ncbigene

position:786472:-1
position: 786472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803605:-1
position: 803605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786472-803605:-1:exon

LOC125366735
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125366735
product: uncharacterized protein C1orf198 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048367434.1
SIO_010081: LOC125366735
subclass of: SO_0000673
so part of: LOC125366735
location: complement(join(786472..786535,787501..787999,794925..794975,803268..803605))
location: region:786472-803605:-1
so has part: feature:803268-803605:-1:exon
so has part: feature:794925-794975:-1:exon
so has part: feature:787501-787999:-1:exon
so has part: feature:786472-786535:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:803268-803605:-1:exon

position:803268:-1
position: 803268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:794925-794975:-1:exon

position:794925:-1
position: 794925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794975:-1
position: 794975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:787501-787999:-1:exon

position:787501:-1
position: 787501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787999:-1
position: 787999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:786472-786535:-1:exon

position:786535:-1
position: 786535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125366735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125366735
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein C1orf198 homolog
translation: MASMAAAIAASRSAVMSGNRPLDERERKRFTYFSSLSPMARKIMQDKEKIREKYGPEWARLPPAQQDEVIDRCLLGPRAPPAADAGDPGRFPGPRGPTGQKLVRFGDEDLTWQDEHSAPFSWETRSQMEFSISSLSIQEPGVGAPVGEPPRPPAKTSQGVPGLKPPQGSRSSSLDALGPGRKEEEAAFWKVNAERSREGAEAEFQSLTPSQIKSLEKAEKALPSCYWQDPAPKDREAEAAPPEQAPPGAEEQERPRALQAPADAEPLGKPSPPSPRLEDEDPLFSEPALAQVGSSTVVLKTGFDFLDNW
SIO_010081: LOC125366735
subclass of: SO_0000673
so part of: LOC125366735
location: complement(join(786479..786535,787501..787999,794925..794975,803268..803591))
location: region:786479-803591:-1
so has part: feature:803268-803591:-1:exon
so has part: feature:794925-794975:-1:exon
so has part: feature:787501-787999:-1:exon
so has part: feature:786479-786535:-1:exon

XP_048223391.1
type: Protein
SIO_000068: ncbiprotein

position:786479:-1
position: 786479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803591:-1
position: 803591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803268-803591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:794925-794975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:787501-787999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:786479-786535:-1:exon

Ttc13
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ttc13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(806949..853643)
location: region:806949-853643:-1
so has part: feature:806949-853643:-1:exon
subclass of: SO_0000010

125366733
type: Gene
SIO_000068: ncbigene

position:806949:-1
position: 806949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853643:-1
position: 853643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806949-853643:-1:exon

Ttc13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ttc13
product: tetratricopeptide repeat domain 13, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367429.1
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(806949..807791,808860..808939,809057..809135,810951..811030,811624..811759,813896..814002,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:806949-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814002:-1:exon
so has part: feature:811624-811759:-1:exon
so has part: feature:810951-811030:-1:exon
so has part: feature:809057-809135:-1:exon
so has part: feature:808860-808939:-1:exon
so has part: feature:806949-807791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

position:853433:-1
position: 853433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

position:845345:-1
position: 845345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845439:-1
position: 845439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

position:840635:-1
position: 840635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840710:-1
position: 840710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

position:838764:-1
position: 838764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838834:-1
position: 838834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:830342-830458:-1:exon

position:830342:-1
position: 830342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830458:-1
position: 830458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:829447-829557:-1:exon

position:829447:-1
position: 829447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829557:-1
position: 829557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:827072-827154:-1:exon

position:827072:-1
position: 827072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827154:-1
position: 827154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:825369-825510:-1:exon

position:825369:-1
position: 825369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825510:-1
position: 825510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:824263-824437:-1:exon

position:824263:-1
position: 824263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824437:-1
position: 824437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:822541-822697:-1:exon

position:822541:-1
position: 822541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822697:-1
position: 822697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:819627-819757:-1:exon

position:819627:-1
position: 819627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819757:-1
position: 819757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:818145-818277:-1:exon

position:818145:-1
position: 818145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818277:-1
position: 818277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:817347-817439:-1:exon

position:817347:-1
position: 817347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817439:-1
position: 817439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:815671-815754:-1:exon

position:815671:-1
position: 815671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815754:-1
position: 815754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:814744-814828:-1:exon

position:814744:-1
position: 814744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814828:-1
position: 814828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:813896-814002:-1:exon

position:813896:-1
position: 813896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814002:-1
position: 814002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:811624-811759:-1:exon

position:811624:-1
position: 811624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811759:-1
position: 811759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:810951-811030:-1:exon

position:810951:-1
position: 810951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811030:-1
position: 811030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:809057-809135:-1:exon

position:809057:-1
position: 809057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809135:-1
position: 809135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:808860-808939:-1:exon

position:808860:-1
position: 808860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808939:-1
position: 808939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:806949-807791:-1:exon

position:807791:-1
position: 807791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ttc13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ttc13
product: tetratricopeptide repeat domain 13, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367428.1
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(806949..807791,808860..808939,809057..809135,810951..811030,811624..811759,813896..814005,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:806949-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814005:-1:exon
so has part: feature:811624-811759:-1:exon
so has part: feature:810951-811030:-1:exon
so has part: feature:809057-809135:-1:exon
so has part: feature:808860-808939:-1:exon
so has part: feature:806949-807791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:814744-814828:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:813896-814005:-1:exon

position:814005:-1
position: 814005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:811624-811759:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:810951-811030:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:809057-809135:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:808860-808939:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:806949-807791:-1:exon

Ttc13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ttc13
product: tetratricopeptide repeat domain 13, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367427.1
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(806949..807791,808860..808939,809057..809135,810951..811030,811624..811759,813896..814002,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,834421..834486,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:806949-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:834421-834486:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814002:-1:exon
so has part: feature:811624-811759:-1:exon
so has part: feature:810951-811030:-1:exon
so has part: feature:809057-809135:-1:exon
so has part: feature:808860-808939:-1:exon
so has part: feature:806949-807791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834421-834486:-1:exon

position:834421:-1
position: 834421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834486:-1
position: 834486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:814744-814828:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:813896-814002:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:811624-811759:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:810951-811030:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:809057-809135:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:808860-808939:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:806949-807791:-1:exon

Ttc13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ttc13
product: tetratricopeptide repeat domain 13, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367425.1
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(806949..807791,808860..808939,809057..809135,810951..811030,811624..811759,813896..814005,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,834421..834486,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:806949-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:834421-834486:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814005:-1:exon
so has part: feature:811624-811759:-1:exon
so has part: feature:810951-811030:-1:exon
so has part: feature:809057-809135:-1:exon
so has part: feature:808860-808939:-1:exon
so has part: feature:806949-807791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834421-834486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:814744-814828:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:813896-814005:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:811624-811759:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:810951-811030:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:809057-809135:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:808860-808939:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:806949-807791:-1:exon

Ttc13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ttc13
product: tetratricopeptide repeat domain 13, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367424.1
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(806949..807791,808860..808939,809057..809135,810951..811030,811624..811759,813896..814002,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,833231..833323,834421..834486,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:806949-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:834421-834486:-1:exon
so has part: feature:833231-833323:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814002:-1:exon
so has part: feature:811624-811759:-1:exon
so has part: feature:810951-811030:-1:exon
so has part: feature:809057-809135:-1:exon
so has part: feature:808860-808939:-1:exon
so has part: feature:806949-807791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834421-834486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833231-833323:-1:exon

position:833231:-1
position: 833231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833323:-1
position: 833323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:814744-814828:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813896-814002:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:811624-811759:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:810951-811030:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:809057-809135:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:808860-808939:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:806949-807791:-1:exon

Ttc13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ttc13
product: tetratricopeptide repeat domain 13, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367423.1
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(806949..807791,808860..808939,809057..809135,810951..811030,811624..811759,813896..814005,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,833231..833323,834421..834486,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:806949-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:834421-834486:-1:exon
so has part: feature:833231-833323:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814005:-1:exon
so has part: feature:811624-811759:-1:exon
so has part: feature:810951-811030:-1:exon
so has part: feature:809057-809135:-1:exon
so has part: feature:808860-808939:-1:exon
so has part: feature:806949-807791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834421-834486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833231-833323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:814744-814828:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813896-814005:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:811624-811759:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:810951-811030:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:809057-809135:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:808860-808939:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:806949-807791:-1:exon

Ttc13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ttc13
product: tetratricopeptide repeat domain 13, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367431.1
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(806949..807791,808860..808939,809057..809135,810951..811030,811624..811759,813896..814005,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,833231..833323,834421..834486,838764..838834,845345..845439,853433..853447))
location: region:806949-853447:-1
so has part: feature:853433-853447:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:834421-834486:-1:exon
so has part: feature:833231-833323:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814005:-1:exon
so has part: feature:811624-811759:-1:exon
so has part: feature:810951-811030:-1:exon
so has part: feature:809057-809135:-1:exon
so has part: feature:808860-808939:-1:exon
so has part: feature:806949-807791:-1:exon

position:853447:-1
position: 853447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:834421-834486:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:833231-833323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:814744-814828:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:813896-814005:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:811624-811759:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:810951-811030:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:809057-809135:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:808860-808939:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:806949-807791:-1:exon

Ttc13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ttc13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 13 isoform X6
translation: MAPAGRGGGGGGGRGGAGARALRWLLLLGAAAGARASEHFPPLSLLKPEAPAAGGCAQPGEWADQYPAECESSFLNFHESDCEPKGSPSCDSLLSLNTEKILSQAKSIAEQKRFPFATDNDSTNEELAIAYVLIGSGLYDEAIRHFSTMLQILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGLMLYHHGSLHEALKNFKRCLQLEPYNDVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNVDMDLPGSFKDHWAKTLPFLLEDYEEQPGLQPHIKDVLHQNFDSYKPEVQELICAADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTWTNSKVRVSGKTRLMQWRDVFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKFNTKTKDGFTVNTKVPSLKDQGKDYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEIDALYKDLTAKGKVLILSSEFGEADAVCNLILSLVYYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGRIPKGKLVDFEAMTAPGSEAFSKVAKSWMNLKSISPSYKTLPSVSETFPTLRSVIEVLNTDSAPRCVRKL
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(807677..807791,808860..808939,809057..809135,810951..811030,811624..811759,813896..814002,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:807677-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814002:-1:exon
so has part: feature:811624-811759:-1:exon
so has part: feature:810951-811030:-1:exon
so has part: feature:809057-809135:-1:exon
so has part: feature:808860-808939:-1:exon
so has part: feature:807677-807791:-1:exon

XP_048223386.1
type: Protein
SIO_000068: ncbiprotein

position:807677:-1
position: 807677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:814744-814828:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:813896-814002:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:811624-811759:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:810951-811030:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:809057-809135:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:808860-808939:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:807677-807791:-1:exon

Ttc13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ttc13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 13 isoform X5
translation: MAPAGRGGGGGGGRGGAGARALRWLLLLGAAAGARASEHFPPLSLLKPEAPAAGGCAQPGEWADQYPAECESSFLNFHESDCEPKGSPSCDSLLSLNTEKILSQAKSIAEQKRFPFATDNDSTNEELAIAYVLIGSGLYDEAIRHFSTMLQILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGLMLYHHGSLHEALKNFKRCLQLEPYNDVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNVDMDLPGSFKDHWAKTLPFLLEDYEEQPGLQPHIKDVLHQNFDSYKPEVQELICAADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTWTNSKVRVSGKTRLMQWRDVFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKDYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEIDALYKDLTAKGKVLILSSEFGEADAVCNLILSLVYYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGRIPKGKLVDFEAMTAPGSEAFSKVAKSWMNLKSISPSYKTLPSVSETFPTLRSVIEVLNTDSAPRCVRKL
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(807677..807791,808860..808939,809057..809135,810951..811030,811624..811759,813896..814005,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:807677-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814005:-1:exon
so has part: feature:811624-811759:-1:exon
so has part: feature:810951-811030:-1:exon
so has part: feature:809057-809135:-1:exon
so has part: feature:808860-808939:-1:exon
so has part: feature:807677-807791:-1:exon

XP_048223385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:814744-814828:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:813896-814005:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:811624-811759:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:810951-811030:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:809057-809135:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:808860-808939:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:807677-807791:-1:exon

Ttc13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ttc13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 13 isoform X4
translation: MAPAGRGGGGGGGRGGAGARALRWLLLLGAAAGARASEHFPPLSLLKPEAPAAGGCAQPGEWADQYPAECESSFLNFHESDCEPKGSPSCDSLLSLNTEKILSQAKSIAEQKRFPFATDNDSTNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGLMLYHHGSLHEALKNFKRCLQLEPYNDVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNVDMDLPGSFKDHWAKTLPFLLEDYEEQPGLQPHIKDVLHQNFDSYKPEVQELICAADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTWTNSKVRVSGKTRLMQWRDVFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKFNTKTKDGFTVNTKVPSLKDQGKDYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEIDALYKDLTAKGKVLILSSEFGEADAVCNLILSLVYYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGRIPKGKLVDFEAMTAPGSEAFSKVAKSWMNLKSISPSYKTLPSVSETFPTLRSVIEVLNTDSAPRCVRKL
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(807677..807791,808860..808939,809057..809135,810951..811030,811624..811759,813896..814002,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,834421..834486,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:807677-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:834421-834486:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814002:-1:exon
so has part: feature:811624-811759:-1:exon
so has part: feature:810951-811030:-1:exon
so has part: feature:809057-809135:-1:exon
so has part: feature:808860-808939:-1:exon
so has part: feature:807677-807791:-1:exon

XP_048223384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834421-834486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:814744-814828:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:813896-814002:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:811624-811759:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:810951-811030:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:809057-809135:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:808860-808939:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:807677-807791:-1:exon

Ttc13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ttc13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 13 isoform X3
translation: MAPAGRGGGGGGGRGGAGARALRWLLLLGAAAGARASEHFPPLSLLKPEAPAAGGCAQPGEWADQYPAECESSFLNFHESDCEPKGSPSCDSLLSLNTEKILSQAKSIAEQKRFPFATDNDSTNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGLMLYHHGSLHEALKNFKRCLQLEPYNDVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNVDMDLPGSFKDHWAKTLPFLLEDYEEQPGLQPHIKDVLHQNFDSYKPEVQELICAADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTWTNSKVRVSGKTRLMQWRDVFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKDYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEIDALYKDLTAKGKVLILSSEFGEADAVCNLILSLVYYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGRIPKGKLVDFEAMTAPGSEAFSKVAKSWMNLKSISPSYKTLPSVSETFPTLRSVIEVLNTDSAPRCVRKL
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(807677..807791,808860..808939,809057..809135,810951..811030,811624..811759,813896..814005,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,834421..834486,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:807677-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:834421-834486:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814005:-1:exon
so has part: feature:811624-811759:-1:exon
so has part: feature:810951-811030:-1:exon
so has part: feature:809057-809135:-1:exon
so has part: feature:808860-808939:-1:exon
so has part: feature:807677-807791:-1:exon

XP_048223382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834421-834486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:814744-814828:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:813896-814005:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:811624-811759:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:810951-811030:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:809057-809135:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:808860-808939:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:807677-807791:-1:exon

Ttc13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ttc13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 13 isoform X2
translation: MAPAGRGGGGGGGRGGAGARALRWLLLLGAAAGARASEHFPPLSLLKPEAPAAGGCAQPGEWADQYPAECESSFLNFHESDCEPKGSPSCDSLLSLNTEKILSQAKSIAEQKRFPFATDNDSTNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVIALEPDRPEVLEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGLMLYHHGSLHEALKNFKRCLQLEPYNDVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNVDMDLPGSFKDHWAKTLPFLLEDYEEQPGLQPHIKDVLHQNFDSYKPEVQELICAADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTWTNSKVRVSGKTRLMQWRDVFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKFNTKTKDGFTVNTKVPSLKDQGKDYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEIDALYKDLTAKGKVLILSSEFGEADAVCNLILSLVYYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGRIPKGKLVDFEAMTAPGSEAFSKVAKSWMNLKSISPSYKTLPSVSETFPTLRSVIEVLNTDSAPRCVRKL
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(807677..807791,808860..808939,809057..809135,810951..811030,811624..811759,813896..814002,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,833231..833323,834421..834486,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:807677-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:834421-834486:-1:exon
so has part: feature:833231-833323:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814002:-1:exon
so has part: feature:811624-811759:-1:exon
so has part: feature:810951-811030:-1:exon
so has part: feature:809057-809135:-1:exon
so has part: feature:808860-808939:-1:exon
so has part: feature:807677-807791:-1:exon

XP_048223381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834421-834486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833231-833323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:814744-814828:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813896-814002:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:811624-811759:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:810951-811030:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:809057-809135:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:808860-808939:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:807677-807791:-1:exon

Ttc13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ttc13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 13 isoform X1
translation: MAPAGRGGGGGGGRGGAGARALRWLLLLGAAAGARASEHFPPLSLLKPEAPAAGGCAQPGEWADQYPAECESSFLNFHESDCEPKGSPSCDSLLSLNTEKILSQAKSIAEQKRFPFATDNDSTNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVIALEPDRPEVLEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGLMLYHHGSLHEALKNFKRCLQLEPYNDVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNVDMDLPGSFKDHWAKTLPFLLEDYEEQPGLQPHIKDVLHQNFDSYKPEVQELICAADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTWTNSKVRVSGKTRLMQWRDVFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKDYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEIDALYKDLTAKGKVLILSSEFGEADAVCNLILSLVYYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGRIPKGKLVDFEAMTAPGSEAFSKVAKSWMNLKSISPSYKTLPSVSETFPTLRSVIEVLNTDSAPRCVRKL
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(807677..807791,808860..808939,809057..809135,810951..811030,811624..811759,813896..814005,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,833231..833323,834421..834486,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:807677-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:834421-834486:-1:exon
so has part: feature:833231-833323:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814005:-1:exon
so has part: feature:811624-811759:-1:exon
so has part: feature:810951-811030:-1:exon
so has part: feature:809057-809135:-1:exon
so has part: feature:808860-808939:-1:exon
so has part: feature:807677-807791:-1:exon

XP_048223380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834421-834486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833231-833323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:814744-814828:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813896-814005:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:811624-811759:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:810951-811030:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:809057-809135:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:808860-808939:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:807677-807791:-1:exon

Ttc13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ttc13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 13 isoform X8
translation: MLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVIALEPDRPEVLEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGLMLYHHGSLHEALKNFKRCLQLEPYNDVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNVDMDLPGSFKDHWAKTLPFLLEDYEEQPGLQPHIKDVLHQNFDSYKPEVQELICAADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTWTNSKVRVSGKTRLMQWRDVFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKDYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEIDALYKDLTAKGKVLILSSEFGEADAVCNLILSLVYYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGRIPKGKLVDFEAMTAPGSEAFSKVAKSWMNLKSISPSYKTLPSVSETFPTLRSVIEVLNTDSAPRCVRKL
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(807677..807791,808860..808939,809057..809135,810951..811030,811624..811759,813896..814005,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,833231..833323,834421..834486,838764..838772))
location: region:807677-838772:-1
so has part: feature:838764-838772:-1:exon
so has part: feature:834421-834486:-1:exon
so has part: feature:833231-833323:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814005:-1:exon
so has part: feature:811624-811759:-1:exon
so has part: feature:810951-811030:-1:exon
so has part: feature:809057-809135:-1:exon
so has part: feature:808860-808939:-1:exon
so has part: feature:807677-807791:-1:exon

XP_048223388.1
type: Protein
SIO_000068: ncbiprotein

position:838772:-1
position: 838772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838764-838772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:834421-834486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833231-833323:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:814744-814828:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:813896-814005:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:811624-811759:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:810951-811030:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:809057-809135:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:808860-808939:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:807677-807791:-1:exon

Ttc13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ttc13
product: tetratricopeptide repeat domain 13, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048367432.1
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(812708..812763,813896..814005,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,833231..833323,834421..834486,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:812708-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:834421-834486:-1:exon
so has part: feature:833231-833323:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814005:-1:exon
so has part: feature:812708-812763:-1:exon

position:812708:-1
position: 812708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834421-834486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833231-833323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:814744-814828:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813896-814005:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:812708-812763:-1:exon

position:812763:-1
position: 812763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ttc13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ttc13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 13 isoform X9
translation: MAPAGRGGGGGGGRGGAGARALRWLLLLGAAAGARASEHFPPLSLLKPEAPAAGGCAQPGEWADQYPAECESSFLNFHESDCEPKGSPSCDSLLSLNTEKILSQAKSIAEQKRFPFATDNDSTNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVIALEPDRPEVLEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGLMLYHHGSLHEALKNFKRCLQLEPYNDVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNVDMDLPGSFKDHWAKTLPFLLEDYEEQPGLQPHIKDVLHQNFDSYKPEVQELICAADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTWTNSKVRVSGKTRLMQWRDVFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKDYDGFTITITGDKISQQQFMPS
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(812733..812763,813896..814005,814744..814828,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,833231..833323,834421..834486,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:812733-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:834421-834486:-1:exon
so has part: feature:833231-833323:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814744-814828:-1:exon
so has part: feature:813896-814005:-1:exon
so has part: feature:812733-812763:-1:exon

XP_048223389.1
type: Protein
SIO_000068: ncbiprotein

position:812733:-1
position: 812733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834421-834486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833231-833323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:814744-814828:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813896-814005:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:812733-812763:-1:exon

Ttc13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ttc13
product: tetratricopeptide repeat domain 13, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048367430.1
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(814924..815463,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,833231..833323,834421..834486,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:814924-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:834421-834486:-1:exon
so has part: feature:833231-833323:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:814924-815463:-1:exon

position:814924:-1
position: 814924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834421-834486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833231-833323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:814924-815463:-1:exon

position:815463:-1
position: 815463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ttc13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ttc13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 13 isoform X7
translation: MAPAGRGGGGGGGRGGAGARALRWLLLLGAAAGARASEHFPPLSLLKPEAPAAGGCAQPGEWADQYPAECESSFLNFHESDCEPKGSPSCDSLLSLNTEKILSQAKSIAEQKRFPFATDNDSTNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVIALEPDRPEVLEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGLMLYHHGSLHEALKNFKRCLQLEPYNDVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNVDMDLPGSFKDHWAKTLPFLLEDYEEQPGLQPHIKDVLHQNFDSYKPEVQELICAADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTWTNSKVRVSGKTRLMQWRDVFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGLSVRELGLEKREAAGRILASERLEACHCGWNVRNQSFRVTCTPSVETLVLAVHPCLLHSLSACGLSVLLFPAPPSGWTTSSLILWSQPPHSLQLELWRNSCPLVFSGAPGPRQTAECPVFRLLP
SIO_010081: Ttc13
subclass of: SO_0000673
so part of: Ttc13
location: complement(join(815088..815463,815671..815754,817347..817439,818145..818277,819627..819757,822541..822697,824263..824437,825369..825510,827072..827154,829447..829557,830342..830458,833231..833323,834421..834486,838764..838834,840635..840710,845345..845439,853433..853643))
location: region:815088-853643:-1
so has part: feature:853433-853643:-1:exon
so has part: feature:845345-845439:-1:exon
so has part: feature:840635-840710:-1:exon
so has part: feature:838764-838834:-1:exon
so has part: feature:834421-834486:-1:exon
so has part: feature:833231-833323:-1:exon
so has part: feature:830342-830458:-1:exon
so has part: feature:829447-829557:-1:exon
so has part: feature:827072-827154:-1:exon
so has part: feature:825369-825510:-1:exon
so has part: feature:824263-824437:-1:exon
so has part: feature:822541-822697:-1:exon
so has part: feature:819627-819757:-1:exon
so has part: feature:818145-818277:-1:exon
so has part: feature:817347-817439:-1:exon
so has part: feature:815671-815754:-1:exon
so has part: feature:815088-815463:-1:exon

XP_048223387.1
type: Protein
SIO_000068: ncbiprotein

position:815088:-1
position: 815088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853433-853643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845345-845439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840635-840710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838764-838834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834421-834486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833231-833323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:830342-830458:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:829447-829557:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:827072-827154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825369-825510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824263-824437:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:822541-822697:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:819627-819757:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:818145-818277:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:817347-817439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:815671-815754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:815088-815463:-1:exon

Arv1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Arv1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 853873..860404
location: region:853873-860404:1
so has part: feature:853873-860404:1:exon
subclass of: SO_0000010

125366736
type: Gene
SIO_000068: ncbigene

position:853873:1
position: 853873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860404:1
position: 860404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853873-860404:1:exon

Arv1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arv1
product: ARV1 homolog, fatty acid homeostasis modulator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048367437.1
SIO_010081: Arv1
subclass of: SO_0000673
so part of: Arv1
location: join(853873..854043,854874..854993,856366..856519,857089..857313,858581..858724,860035..860399)
location: region:853873-860399:1
so has part: feature:853873-854043:1:exon
so has part: feature:854874-854993:1:exon
so has part: feature:856366-856519:1:exon
so has part: feature:857089-857313:1:exon
so has part: feature:858581-858724:1:exon
so has part: feature:860035-860399:1:exon

position:860399:1
position: 860399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853873-854043:1:exon

position:854043:1
position: 854043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:854874-854993:1:exon

position:854874:1
position: 854874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854993:1
position: 854993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:856366-856519:1:exon

position:856366:1
position: 856366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856519:1
position: 856519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:857089-857313:1:exon

position:857089:1
position: 857089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857313:1
position: 857313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:858581-858724:1:exon

position:858581:1
position: 858581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858724:1
position: 858724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:860035-860399:1:exon

position:860035:1
position: 860035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Arv1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arv1
product: ARV1 homolog, fatty acid homeostasis modulator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048367435.1
SIO_010081: Arv1
subclass of: SO_0000673
so part of: Arv1
location: join(853874..854043,854874..854993,856366..856519,857134..857313,858581..858724,860035..860404)
location: region:853874-860404:1
so has part: feature:853874-854043:1:exon
so has part: feature:854874-854993:1:exon
so has part: feature:856366-856519:1:exon
so has part: feature:857134-857313:1:exon
so has part: feature:858581-858724:1:exon
so has part: feature:860035-860404:1:exon

position:853874:1
position: 853874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853874-854043:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854874-854993:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856366-856519:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857134-857313:1:exon

position:857134:1
position: 857134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:858581-858724:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860035-860404:1:exon

Arv1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arv1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ARV1 isoform X2
translation: MGTGGRCGPRPGKGAEGPASACIRYRCIECNREARELYRDYSHGVLKITICKSCQKPVDKYIEYDPVIILINAILCKAQAYRHILFNTKINIHGKLCVFCLLCDAYLRWRQLQDSNQSTAPDDLIRYTREWDFYRMFAIASLEQTAFFLGIFAFVWLERPKTAKKKPDLCLLLKALLLSSYGKLLLIPAVIWEHDYTPLCLRLIKVFVLASHFQAIRVTLNINRKVSLLAVLSGSLLESAMVYFFQRLEWDVSTDCAIYKSQDL
SIO_010081: Arv1
subclass of: SO_0000673
so part of: Arv1
location: join(853891..854043,854874..854993,856366..856519,857089..857313,858581..858723)
location: region:853891-858723:1
so has part: feature:853891-854043:1:exon
so has part: feature:854874-854993:1:exon
so has part: feature:856366-856519:1:exon
so has part: feature:857089-857313:1:exon
so has part: feature:858581-858723:1:exon

XP_048223394.1
type: Protein
SIO_000068: ncbiprotein

position:853891:1
position: 853891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858723:1
position: 858723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853891-854043:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854874-854993:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856366-856519:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857089-857313:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858581-858723:1:exon

Arv1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arv1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ARV1 isoform X1
translation: MGTGGRCGPRPGKGAEGPASACIRYRCIECNREARELYRDYSHGVLKITICKSCQKPVDKYIEYDPVIILINAILCKAQAYRHILFNTKINIHGKLCVFCLLCDAYLRWRQLQDSNQSTAPDDLIRYTREWDFYRMFAIASLERPKTAKKKPDLCLLLKALLLSSYGKLLLIPAVIWEHDYTPLCLRLIKVFVLASHFQAIRVTLNINRKVSLLAVLSGSLLESAMVYFFQRLEWDVSTDCAIYKSQDL
SIO_010081: Arv1
subclass of: SO_0000673
so part of: Arv1
location: join(853891..854043,854874..854993,856366..856519,857134..857313,858581..858723)
location: region:853891-858723:1
so has part: feature:853891-854043:1:exon
so has part: feature:854874-854993:1:exon
so has part: feature:856366-856519:1:exon
so has part: feature:857134-857313:1:exon
so has part: feature:858581-858723:1:exon

XP_048223392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:853891-854043:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854874-854993:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856366-856519:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857134-857313:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858581-858723:1:exon

Fam89a
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Fam89a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(861114..872603)
location: region:861114-872603:-1
so has part: feature:861114-872603:-1:exon
subclass of: SO_0000010

125366737
type: Gene
SIO_000068: ncbigene

position:861114:-1
position: 861114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872603:-1
position: 872603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:861114-872603:-1:exon

Fam89a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Fam89a
product: family with sequence similarity 89 member A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367438.1
SIO_010081: Fam89a
subclass of: SO_0000673
so part of: Fam89a
location: complement(join(861114..861978,872337..872603))
location: region:861114-872603:-1
so has part: feature:872337-872603:-1:exon
so has part: feature:861114-861978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:872337-872603:-1:exon

position:872337:-1
position: 872337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:861114-861978:-1:exon

position:861978:-1
position: 861978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Fam89a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Fam89a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM89A
translation: MSEAGAAGAAPGLRVDGLPPLPRSLSGLLHSAAGGAAGGWRRLERLYAQKSRIQDELSRGAAGGGARAAGPRARPRNLDAALALLRKEMVGLRQLDMSLLCQLYSLYESIQEYKGACQAAASPDCAYVLENGFFDDEEDFQVPRSLQEDGRRGPPGDLPMAPLSFSDWGLESL
SIO_010081: Fam89a
subclass of: SO_0000673
so part of: Fam89a
location: complement(join(861724..861978,872337..872603))
location: region:861724-872603:-1
so has part: feature:872337-872603:-1:exon
so has part: feature:861724-861978:-1:exon

XP_048223395.1
type: Protein
SIO_000068: ncbiprotein

position:861724:-1
position: 861724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:872337-872603:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:861724-861978:-1:exon

Trim67
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Trim67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 886699..924981
location: region:886699-924981:1
so has part: feature:886699-924981:1:exon
subclass of: SO_0000010

125366782
type: Gene
SIO_000068: ncbigene

position:886699:1
position: 886699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924981:1
position: 924981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886699-924981:1:exon

Trim67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Trim67
product: tripartite motif containing 67, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048367491.1
SIO_010081: Trim67
subclass of: SO_0000673
so part of: Trim67
location: join(886699..887571,908054..908149,916043..916165,917020..917130,917685..917844,919426..919571,921201..921339,921729..922032,924052..924214,924789..924981)
location: region:886699-924981:1
so has part: feature:886699-887571:1:exon
so has part: feature:908054-908149:1:exon
so has part: feature:916043-916165:1:exon
so has part: feature:917020-917130:1:exon
so has part: feature:917685-917844:1:exon
so has part: feature:919426-919571:1:exon
so has part: feature:921201-921339:1:exon
so has part: feature:921729-922032:1:exon
so has part: feature:924052-924214:1:exon
so has part: feature:924789-924981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:886699-887571:1:exon

position:887571:1
position: 887571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:908054-908149:1:exon

position:908054:1
position: 908054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908149:1
position: 908149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:916043-916165:1:exon

position:916043:1
position: 916043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916165:1
position: 916165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:917020-917130:1:exon

position:917020:1
position: 917020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917130:1
position: 917130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:917685-917844:1:exon

position:917685:1
position: 917685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917844:1
position: 917844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:919426-919571:1:exon

position:919426:1
position: 919426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919571:1
position: 919571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:921201-921339:1:exon

position:921201:1
position: 921201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921339:1
position: 921339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:921729-922032:1:exon

position:921729:1
position: 921729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922032:1
position: 922032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:924052-924214:1:exon

position:924052:1
position: 924052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924214:1
position: 924214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:924789-924981:1:exon

position:924789:1
position: 924789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Trim67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Trim67
product: tripartite motif containing 67, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048367489.1
SIO_010081: Trim67
subclass of: SO_0000673
so part of: Trim67
location: join(886699..887571,908054..908149,916043..916165,917020..917130,917685..917838,919426..919571,921201..921519,921729..922032,924052..924214,924789..924981)
location: region:886699-924981:1
so has part: feature:886699-887571:1:exon
so has part: feature:908054-908149:1:exon
so has part: feature:916043-916165:1:exon
so has part: feature:917020-917130:1:exon
so has part: feature:917685-917838:1:exon
so has part: feature:919426-919571:1:exon
so has part: feature:921201-921519:1:exon
so has part: feature:921729-922032:1:exon
so has part: feature:924052-924214:1:exon
so has part: feature:924789-924981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:886699-887571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:908054-908149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916043-916165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917020-917130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917685-917838:1:exon

position:917838:1
position: 917838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:919426-919571:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:921201-921519:1:exon

position:921519:1
position: 921519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:921729-922032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924052-924214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924789-924981:1:exon

Trim67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Trim67
product: tripartite motif containing 67, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048367492.1
SIO_010081: Trim67
subclass of: SO_0000673
so part of: Trim67
location: join(886699..887571,908054..908149,916043..916165,917020..917130,917685..917838,919426..919571,921201..921339,921729..922032,924052..924214,924789..924981)
location: region:886699-924981:1
so has part: feature:886699-887571:1:exon
so has part: feature:908054-908149:1:exon
so has part: feature:916043-916165:1:exon
so has part: feature:917020-917130:1:exon
so has part: feature:917685-917838:1:exon
so has part: feature:919426-919571:1:exon
so has part: feature:921201-921339:1:exon
so has part: feature:921729-922032:1:exon
so has part: feature:924052-924214:1:exon
so has part: feature:924789-924981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:886699-887571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:908054-908149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916043-916165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917020-917130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917685-917838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:919426-919571:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:921201-921339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:921729-922032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924052-924214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924789-924981:1:exon

Trim67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Trim67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 67 isoform X2
translation: MEEELKCLVCGSLFREPIILPCSHNVCLPCARTIAVQTPDGEQPLPAPPLPPRGAAAAAAPPPEPDPAAGGGAGAGADHADKLSLHSEADSGYGSYTPSLKSPNGVRVLPAGPAPPGSAAARGHAGSSSITCPQCHRSASLDPRGLRGFPRNRLLEAIVQRHLQGRAAPEPAPAACQLCDRAPPAPAAALCEQCDVLYCAACQLRCHPARGPFAKHRLLPPPPPPPAAPPPAAPAAAAAARKPPACPEHEAESYSTYCASCRGPVCGLCLEEGRHGQHELRPLGATWKQHKAQLSQALNGVSDKAKEAKEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALTRQKAKLLTKVTKEREHKLKMVWDQINHCTLKLRQSTGLMEYCLEVIKEDDPSGFLQISDALIKRVQVSQEQWVKGALEPKVSAEFDLTLDSEPLLQAIHQLDFIQMKCRVPPGPLLQLEKCCTRNNSVTLAWRTPPFAHSPADGYILELDDGDGGQFREVYVGKETLCTIDGLHFNSTYNARVKAFNAAGVGPYSKTVVLQTSDVAWFTFDPNSGHRDIILSNDNQTATCSSYDDRVVLGTAAFSKGVHYWELHVDRYDNHPDPAFGVARASVAKDMMLGKDDKAWAMYVDNNRSWFMHCNSHTNRTEGGVCKGATVGVLLDLNKHALTFFINGQQQGPTAFSHVEGVFMPALSLNRNVQVTLHTGLEVPTSLGRPKLSGN
SIO_010081: Trim67
subclass of: SO_0000673
so part of: Trim67
location: join(886699..887571,908054..908149,916043..916165,917020..917130,917685..917844,919426..919571,921201..921339,921729..922032,924052..924214,924789..924854)
location: region:886699-924854:1
so has part: feature:886699-887571:1:exon
so has part: feature:908054-908149:1:exon
so has part: feature:916043-916165:1:exon
so has part: feature:917020-917130:1:exon
so has part: feature:917685-917844:1:exon
so has part: feature:919426-919571:1:exon
so has part: feature:921201-921339:1:exon
so has part: feature:921729-922032:1:exon
so has part: feature:924052-924214:1:exon
so has part: feature:924789-924854:1:exon

XP_048223448.1
type: Protein
SIO_000068: ncbiprotein

position:924854:1
position: 924854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886699-887571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:908054-908149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916043-916165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917020-917130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917685-917844:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:919426-919571:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:921201-921339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:921729-922032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924052-924214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924789-924854:1:exon

Trim67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Trim67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 67 isoform X1
translation: MEEELKCLVCGSLFREPIILPCSHNVCLPCARTIAVQTPDGEQPLPAPPLPPRGAAAAAAPPPEPDPAAGGGAGAGADHADKLSLHSEADSGYGSYTPSLKSPNGVRVLPAGPAPPGSAAARGHAGSSSITCPQCHRSASLDPRGLRGFPRNRLLEAIVQRHLQGRAAPEPAPAACQLCDRAPPAPAAALCEQCDVLYCAACQLRCHPARGPFAKHRLLPPPPPPPAAPPPAAPAAAAAARKPPACPEHEAESYSTYCASCRGPVCGLCLEEGRHGQHELRPLGATWKQHKAQLSQALNGVSDKAKEAKEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALTRQKAKLLTKVTKEREHKLKMVWDQINHCTLKLRQSTGLMEYCLEVIKEDDPSGFLQISDALIKRVQVSQEQWVKGALEPKVSAEFDLTLDSEPLLQAIHQLDFIQMKLPPGPLLQLEKCCTRNNSVTLAWRTPPFAHSPADGYILELDDGDGGQFREVYVGKETLCTIDGLHFNSTYNARVKAFNAAGVGPYSKTVVLQTSDGETYLHSGTGAAAPWAAREPSLGGRPHGSPRLNRPPVRLATGVNFLLCPFEGSKRRAGAGVAWFTFDPNSGHRDIILSNDNQTATCSSYDDRVVLGTAAFSKGVHYWELHVDRYDNHPDPAFGVARASVAKDMMLGKDDKAWAMYVDNNRSWFMHCNSHTNRTEGGVCKGATVGVLLDLNKHALTFFINGQQQGPTAFSHVEGVFMPALSLNRNVQVTLHTGLEVPTSLGRPKLSGN
SIO_010081: Trim67
subclass of: SO_0000673
so part of: Trim67
location: join(886699..887571,908054..908149,916043..916165,917020..917130,917685..917838,919426..919571,921201..921519,921729..922032,924052..924214,924789..924854)
location: region:886699-924854:1
so has part: feature:886699-887571:1:exon
so has part: feature:908054-908149:1:exon
so has part: feature:916043-916165:1:exon
so has part: feature:917020-917130:1:exon
so has part: feature:917685-917838:1:exon
so has part: feature:919426-919571:1:exon
so has part: feature:921201-921519:1:exon
so has part: feature:921729-922032:1:exon
so has part: feature:924052-924214:1:exon
so has part: feature:924789-924854:1:exon

XP_048223446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:886699-887571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:908054-908149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916043-916165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917020-917130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917685-917838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:919426-919571:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:921201-921519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:921729-922032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924052-924214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924789-924854:1:exon

Trim67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Trim67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 67 isoform X3
translation: MEEELKCLVCGSLFREPIILPCSHNVCLPCARTIAVQTPDGEQPLPAPPLPPRGAAAAAAPPPEPDPAAGGGAGAGADHADKLSLHSEADSGYGSYTPSLKSPNGVRVLPAGPAPPGSAAARGHAGSSSITCPQCHRSASLDPRGLRGFPRNRLLEAIVQRHLQGRAAPEPAPAACQLCDRAPPAPAAALCEQCDVLYCAACQLRCHPARGPFAKHRLLPPPPPPPAAPPPAAPAAAAAARKPPACPEHEAESYSTYCASCRGPVCGLCLEEGRHGQHELRPLGATWKQHKAQLSQALNGVSDKAKEAKEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALTRQKAKLLTKVTKEREHKLKMVWDQINHCTLKLRQSTGLMEYCLEVIKEDDPSGFLQISDALIKRVQVSQEQWVKGALEPKVSAEFDLTLDSEPLLQAIHQLDFIQMKLPPGPLLQLEKCCTRNNSVTLAWRTPPFAHSPADGYILELDDGDGGQFREVYVGKETLCTIDGLHFNSTYNARVKAFNAAGVGPYSKTVVLQTSDVAWFTFDPNSGHRDIILSNDNQTATCSSYDDRVVLGTAAFSKGVHYWELHVDRYDNHPDPAFGVARASVAKDMMLGKDDKAWAMYVDNNRSWFMHCNSHTNRTEGGVCKGATVGVLLDLNKHALTFFINGQQQGPTAFSHVEGVFMPALSLNRNVQVTLHTGLEVPTSLGRPKLSGN
SIO_010081: Trim67
subclass of: SO_0000673
so part of: Trim67
location: join(886699..887571,908054..908149,916043..916165,917020..917130,917685..917838,919426..919571,921201..921339,921729..922032,924052..924214,924789..924854)
location: region:886699-924854:1
so has part: feature:886699-887571:1:exon
so has part: feature:908054-908149:1:exon
so has part: feature:916043-916165:1:exon
so has part: feature:917020-917130:1:exon
so has part: feature:917685-917838:1:exon
so has part: feature:919426-919571:1:exon
so has part: feature:921201-921339:1:exon
so has part: feature:921729-922032:1:exon
so has part: feature:924052-924214:1:exon
so has part: feature:924789-924854:1:exon

XP_048223449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:886699-887571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:908054-908149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916043-916165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917020-917130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917685-917838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:919426-919571:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:921201-921339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:921729-922032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924052-924214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924789-924854:1:exon

C18H1orf131
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: C18H1orf131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(932334..944800)
location: region:932334-944800:-1
so has part: feature:932334-944800:-1:exon
subclass of: SO_0000010

125366818
type: Gene
SIO_000068: ncbigene

position:932334:-1
position: 932334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944800:-1
position: 944800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932334-944800:-1:exon

C18H1orf131
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: C18H1orf131
product: chromosome 18 C1orf131 homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367539.1
SIO_010081: C18H1orf131
subclass of: SO_0000673
so part of: C18H1orf131
location: complement(join(932334..932835,934310..934362,934914..935000,935091..935186,935713..935769,943377..943720,944686..944800))
location: region:932334-944800:-1
so has part: feature:944686-944800:-1:exon
so has part: feature:943377-943720:-1:exon
so has part: feature:935713-935769:-1:exon
so has part: feature:935091-935186:-1:exon
so has part: feature:934914-935000:-1:exon
so has part: feature:934310-934362:-1:exon
so has part: feature:932334-932835:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:944686-944800:-1:exon

position:944686:-1
position: 944686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:943377-943720:-1:exon

position:943377:-1
position: 943377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943720:-1
position: 943720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:935713-935769:-1:exon

position:935713:-1
position: 935713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935769:-1
position: 935769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:935091-935186:-1:exon

position:935091:-1
position: 935091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935186:-1
position: 935186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:934914-935000:-1:exon

position:934914:-1
position: 934914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935000:-1
position: 935000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:934310-934362:-1:exon

position:934310:-1
position: 934310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934362:-1
position: 934362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:932334-932835:-1:exon

position:932835:-1
position: 932835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C18H1orf131
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: C18H1orf131
product: chromosome 18 C1orf131 homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367538.1
SIO_010081: C18H1orf131
subclass of: SO_0000673
so part of: C18H1orf131
location: complement(join(932334..932835,934310..934365,934914..935000,935091..935186,935713..935769,943377..943720,944686..944800))
location: region:932334-944800:-1
so has part: feature:944686-944800:-1:exon
so has part: feature:943377-943720:-1:exon
so has part: feature:935713-935769:-1:exon
so has part: feature:935091-935186:-1:exon
so has part: feature:934914-935000:-1:exon
so has part: feature:934310-934365:-1:exon
so has part: feature:932334-932835:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:944686-944800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:943377-943720:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:935713-935769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935091-935186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:934914-935000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:934310-934365:-1:exon

position:934365:-1
position: 934365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:932334-932835:-1:exon

C18H1orf131
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: C18H1orf131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf131 homolog isoform X2
translation: MPAPREPELGPAASAGSEAALDALLQTLYDLGETGGETEQKRIRKRGTQKRDVEAVSPVAVELAPPPDSLARCQRKSASSFFKELREELHCAPAVPSPAFPSGPEVPAASAVLPTPQKNKGLVEVVEFHSRSKKRRLKPVQDEHTKIKTSVCEKDVDVQEFNLEKARLEVHRFGITGYGKGKERMLEQERAIMLGAKPPKKSYVNYKVLQAQIKEKKATKEEEERVARDTAIFKKKKRKLQEDRKAKKKLAPSILSSGQIGQVGKFKNGTLILSPVDIKKINSSRVTK
SIO_010081: C18H1orf131
subclass of: SO_0000673
so part of: C18H1orf131
location: complement(join(932700..932835,934310..934362,934914..935000,935091..935186,935713..935769,943377..943720,944686..944779))
location: region:932700-944779:-1
so has part: feature:944686-944779:-1:exon
so has part: feature:943377-943720:-1:exon
so has part: feature:935713-935769:-1:exon
so has part: feature:935091-935186:-1:exon
so has part: feature:934914-935000:-1:exon
so has part: feature:934310-934362:-1:exon
so has part: feature:932700-932835:-1:exon

XP_048223496.1
type: Protein
SIO_000068: ncbiprotein

position:932700:-1
position: 932700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944779:-1
position: 944779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944686-944779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:943377-943720:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:935713-935769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935091-935186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:934914-935000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:934310-934362:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:932700-932835:-1:exon

C18H1orf131
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: C18H1orf131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf131 homolog isoform X1
translation: MPAPREPELGPAASAGSEAALDALLQTLYDLGETGGETEQKRIRKRGTQKRDVEAVSPVAVELAPPPDSLARCQRKSASSFFKELREELHCAPAVPSPAFPSGPEVPAASAVLPTPQKNKGLVEVVEFHSRSKKRRLKPVQDEHTKIKTSVCEKDVDVQEFNLEKARLEVHRFGITGYGKGKERMLEQERAIMLGAKPPKKSYVNYKVLQAQIKEKKATKEEEERVQARDTAIFKKKKRKLQEDRKAKKKLAPSILSSGQIGQVGKFKNGTLILSPVDIKKINSSRVTK
SIO_010081: C18H1orf131
subclass of: SO_0000673
so part of: C18H1orf131
location: complement(join(932700..932835,934310..934365,934914..935000,935091..935186,935713..935769,943377..943720,944686..944779))
location: region:932700-944779:-1
so has part: feature:944686-944779:-1:exon
so has part: feature:943377-943720:-1:exon
so has part: feature:935713-935769:-1:exon
so has part: feature:935091-935186:-1:exon
so has part: feature:934914-935000:-1:exon
so has part: feature:934310-934365:-1:exon
so has part: feature:932700-932835:-1:exon

XP_048223495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:944686-944779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:943377-943720:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:935713-935769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935091-935186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:934914-935000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:934310-934365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:932700-932835:-1:exon

Gnpat
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Gnpat
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 944854..965762
location: region:944854-965762:1
so has part: feature:944854-965762:1:exon
subclass of: SO_0000010

125366817
type: Gene
SIO_000068: ncbigene

position:944854:1
position: 944854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965762:1
position: 965762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944854-965762:1:exon

Gnpat
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Gnpat
product: glyceronephosphate O-acyltransferase, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367537.1
SIO_010081: Gnpat
subclass of: SO_0000673
so part of: Gnpat
location: join(944854..945117,951823..952005,952967..953143,954944..955073,955806..955933,956284..956359,956608..956759,956865..956995,958617..958840,959680..959922,961211..961290,962045..962185,963202..963301,963382..963475,964796..964857,965516..965762)
location: region:944854-965762:1
so has part: feature:944854-945117:1:exon
so has part: feature:951823-952005:1:exon
so has part: feature:952967-953143:1:exon
so has part: feature:954944-955073:1:exon
so has part: feature:955806-955933:1:exon
so has part: feature:956284-956359:1:exon
so has part: feature:956608-956759:1:exon
so has part: feature:956865-956995:1:exon
so has part: feature:958617-958840:1:exon
so has part: feature:959680-959922:1:exon
so has part: feature:961211-961290:1:exon
so has part: feature:962045-962185:1:exon
so has part: feature:963202-963301:1:exon
so has part: feature:963382-963475:1:exon
so has part: feature:964796-964857:1:exon
so has part: feature:965516-965762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:944854-945117:1:exon

position:945117:1
position: 945117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:951823-952005:1:exon

position:951823:1
position: 951823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952005:1
position: 952005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:952967-953143:1:exon

position:952967:1
position: 952967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953143:1
position: 953143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:954944-955073:1:exon

position:954944:1
position: 954944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955073:1
position: 955073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:955806-955933:1:exon

position:955806:1
position: 955806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955933:1
position: 955933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:956284-956359:1:exon

position:956284:1
position: 956284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956359:1
position: 956359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:956608-956759:1:exon

position:956608:1
position: 956608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956759:1
position: 956759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:956865-956995:1:exon

position:956865:1
position: 956865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956995:1
position: 956995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:958617-958840:1:exon

position:958617:1
position: 958617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958840:1
position: 958840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:959680-959922:1:exon

position:959680:1
position: 959680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959922:1
position: 959922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:961211-961290:1:exon

position:961211:1
position: 961211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961290:1
position: 961290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:962045-962185:1:exon

position:962045:1
position: 962045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962185:1
position: 962185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:963202-963301:1:exon

position:963202:1
position: 963202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963301:1
position: 963301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:963382-963475:1:exon

position:963382:1
position: 963382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963475:1
position: 963475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:964796-964857:1:exon

position:964796:1
position: 964796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964857:1
position: 964857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:965516-965762:1:exon

position:965516:1
position: 965516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gnpat
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Gnpat
product: glyceronephosphate O-acyltransferase, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367536.1
SIO_010081: Gnpat
subclass of: SO_0000673
so part of: Gnpat
location: join(944887..945117,951823..952005,952967..953143,954950..955073,955806..955933,956284..956359,956608..956759,956865..956995,958617..958840,959680..959922,961211..961290,962045..962185,963202..963301,963382..963475,964796..964857,965516..965762)
location: region:944887-965762:1
so has part: feature:944887-945117:1:exon
so has part: feature:951823-952005:1:exon
so has part: feature:952967-953143:1:exon
so has part: feature:954950-955073:1:exon
so has part: feature:955806-955933:1:exon
so has part: feature:956284-956359:1:exon
so has part: feature:956608-956759:1:exon
so has part: feature:956865-956995:1:exon
so has part: feature:958617-958840:1:exon
so has part: feature:959680-959922:1:exon
so has part: feature:961211-961290:1:exon
so has part: feature:962045-962185:1:exon
so has part: feature:963202-963301:1:exon
so has part: feature:963382-963475:1:exon
so has part: feature:964796-964857:1:exon
so has part: feature:965516-965762:1:exon

position:944887:1
position: 944887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944887-945117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:951823-952005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:952967-953143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954950-955073:1:exon

position:954950:1
position: 954950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:955806-955933:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:956284-956359:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:956608-956759:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956865-956995:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:958617-958840:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:959680-959922:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:961211-961290:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:962045-962185:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:963202-963301:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:963382-963475:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:964796-964857:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:965516-965762:1:exon

Gnpat
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Gnpat
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroxyacetone phosphate acyltransferase isoform X2
translation: MDSPGSSGFHFSADPTGPGAVALLHAKKLKKWDEFEDILEERRHASDLKFAMKCYTPPIYKGITPCKPGDIKEMVLSSEEINYVIKQLSKEYCLSVTTLREEALEILEEMSHKLRLGAIRFFAFVLSKIFKQIFSKVCVNEEGIQKLQLAIQEHPVVLLPSHRSYIDFLMLSFLLYSYDLPVPVIAAGVDFLGMRMVGELLRMSGAFFMRRTFGGNKLYWAVFSEYVKTMLRNGYAPVEFFLEGTRSRSAKTLTPKFGLLSIVMEPFFKREVFDTYLVPISISYDKILEESLYAYELLGVPKPKESTSGLLKARRVLSENFGSIHVYFGDPVSLRSLAAGRMTRNPYNLVPRCIPQRQSEDMHAFVTEVAYKIQLQQIENLVLSPWVLVVAVLLQNRPSMSFDALMEKTVWLKGVAQAFGGFLLWPDNKSAEEIIQSSLVLHSNLVRLVRDEVVLHMASEDSEVVDGLLLQHVTLLMCSAYRNQLLNIFLRPSLVAVALQMTPGFRKEHVFSCFRFLRDVFLDEFIFLPRNTLRDFEEGCYLLCKSEAIQMAGKDILITEQGHAVLDFLVKLFKPFVECYQIICRYLLHEEEEYFTEKQYLAAVRKFTSWLLDQGASQCYDVLSSDVQKNALAAFVRLGVVEKRKENECCIFSVHEPALSRLEEMLDCKTPIGKPATAKL
SIO_010081: Gnpat
subclass of: SO_0000673
so part of: Gnpat
location: join(945040..945117,951823..952005,952967..953143,954944..955073,955806..955933,956284..956359,956608..956759,956865..956995,958617..958840,959680..959922,961211..961290,962045..962185,963202..963301,963382..963475,964796..964857,965516..965559)
location: region:945040-965559:1
so has part: feature:945040-945117:1:exon
so has part: feature:951823-952005:1:exon
so has part: feature:952967-953143:1:exon
so has part: feature:954944-955073:1:exon
so has part: feature:955806-955933:1:exon
so has part: feature:956284-956359:1:exon
so has part: feature:956608-956759:1:exon
so has part: feature:956865-956995:1:exon
so has part: feature:958617-958840:1:exon
so has part: feature:959680-959922:1:exon
so has part: feature:961211-961290:1:exon
so has part: feature:962045-962185:1:exon
so has part: feature:963202-963301:1:exon
so has part: feature:963382-963475:1:exon
so has part: feature:964796-964857:1:exon
so has part: feature:965516-965559:1:exon

XP_048223494.1
type: Protein
SIO_000068: ncbiprotein

position:945040:1
position: 945040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965559:1
position: 965559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945040-945117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:951823-952005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:952967-953143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954944-955073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955806-955933:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:956284-956359:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:956608-956759:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956865-956995:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:958617-958840:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:959680-959922:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:961211-961290:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:962045-962185:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:963202-963301:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:963382-963475:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:964796-964857:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:965516-965559:1:exon

Gnpat
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Gnpat
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroxyacetone phosphate acyltransferase isoform X1
translation: MDSPGSSGFHFSADPTGPGAVALLHAKKLKKWDEFEDILEERRHASDLKFAMKCYTPPIYKGITPCKPGDIKEMVLSSEEINYVIKQLSKEYCLSVTTLREEALEILEEMSHKLRLGAIRFFAFVLSKIFKQIFSKVCVNEEGIQKLAIQEHPVVLLPSHRSYIDFLMLSFLLYSYDLPVPVIAAGVDFLGMRMVGELLRMSGAFFMRRTFGGNKLYWAVFSEYVKTMLRNGYAPVEFFLEGTRSRSAKTLTPKFGLLSIVMEPFFKREVFDTYLVPISISYDKILEESLYAYELLGVPKPKESTSGLLKARRVLSENFGSIHVYFGDPVSLRSLAAGRMTRNPYNLVPRCIPQRQSEDMHAFVTEVAYKIQLQQIENLVLSPWVLVVAVLLQNRPSMSFDALMEKTVWLKGVAQAFGGFLLWPDNKSAEEIIQSSLVLHSNLVRLVRDEVVLHMASEDSEVVDGLLLQHVTLLMCSAYRNQLLNIFLRPSLVAVALQMTPGFRKEHVFSCFRFLRDVFLDEFIFLPRNTLRDFEEGCYLLCKSEAIQMAGKDILITEQGHAVLDFLVKLFKPFVECYQIICRYLLHEEEEYFTEKQYLAAVRKFTSWLLDQGASQCYDVLSSDVQKNALAAFVRLGVVEKRKENECCIFSVHEPALSRLEEMLDCKTPIGKPATAKL
SIO_010081: Gnpat
subclass of: SO_0000673
so part of: Gnpat
location: join(945040..945117,951823..952005,952967..953143,954950..955073,955806..955933,956284..956359,956608..956759,956865..956995,958617..958840,959680..959922,961211..961290,962045..962185,963202..963301,963382..963475,964796..964857,965516..965559)
location: region:945040-965559:1
so has part: feature:945040-945117:1:exon
so has part: feature:951823-952005:1:exon
so has part: feature:952967-953143:1:exon
so has part: feature:954950-955073:1:exon
so has part: feature:955806-955933:1:exon
so has part: feature:956284-956359:1:exon
so has part: feature:956608-956759:1:exon
so has part: feature:956865-956995:1:exon
so has part: feature:958617-958840:1:exon
so has part: feature:959680-959922:1:exon
so has part: feature:961211-961290:1:exon
so has part: feature:962045-962185:1:exon
so has part: feature:963202-963301:1:exon
so has part: feature:963382-963475:1:exon
so has part: feature:964796-964857:1:exon
so has part: feature:965516-965559:1:exon

XP_048223493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:945040-945117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:951823-952005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:952967-953143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954950-955073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955806-955933:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:956284-956359:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:956608-956759:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956865-956995:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:958617-958840:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:959680-959922:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:961211-961290:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:962045-962185:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:963202-963301:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:963382-963475:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:964796-964857:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:965516-965559:1:exon

Exoc8
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Exoc8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(970574..973125)
location: region:970574-973125:-1
so has part: feature:970574-973125:-1:exon
subclass of: SO_0000010

125366755
type: Gene
SIO_000068: ncbigene

position:970574:-1
position: 970574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973125:-1
position: 973125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970574-973125:-1:exon

Exoc8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Exoc8
product: exocyst complex component 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048367452.1
SIO_010081: Exoc8
subclass of: SO_0000673
so part of: Exoc8
location: complement(970574..973125)
location: region:970574-973125:-1
so has part: feature:970574-973125:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:970574-973125:-1:exon

Exoc8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Exoc8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exocyst complex component 8
translation: MSDSGASRLRRQLESGGFEARLYVKQLSQQSDGDRDLQEHRQRVQALAEETAQNLKRNVYQNYRQFIETAREISYLESEMYQLSHLLTEQKSRLESIPLALLPAAAAGAPAGEDAAAAAAAAGPRARAPPAAAAAAPRDPAAPGGEEGPRRTLTTLLEKVEGCRALLEAPGQRLVYNGDLVEYEADHMAQLQRVHGFLMDDCLLVATWLPQRRGAYRYDALYPLDGLAVVNVKDNPPMKDMFKLLMFPESRIFQAENAKVKREWLEVLEETKRALGEKRRRAQEQAAAPRAPPAAPARGPPAEEAAPAAEPAEPAEPPAERVDLSLEWIQELPEDLDVCIAQRDFEGAVDLLDKLGRYLEDKPSPPPVKELRARVDERVRQLTDVLVFELSPDRSLRGGPRATRRAVSQLIRLGQGTKACELFLRNRAAAVHTALRQLRIEGATLLYIHKLCHVFFTSLLETAREFETDFAGTDSGCYSAFVVWARSAMGMFVDAFSKQVFDSKESLSTAAECVKVAKEHCRQLGEMGLDLTFVIHALLVKDIRGALHSYKEIIIEATKHRNSEEMWRRMNLMTPEALGKLREEMRSCGVGDFEQYTGDDCWVNLSYTVVAFTKQTMGFLEEALKLYFPELHMVLLESLVEVILVAVQHVDYSLRCEQDPEKKAFIRQNASFLYETVLPVVEKRFEEGVGKPAKQLQDLRNTSRLVRVNPESTTSVV
SIO_010081: Exoc8
subclass of: SO_0000673
so part of: Exoc8
location: complement(970857..973010)
location: region:970857-973010:-1
so has part: feature:970857-973010:-1:exon

XP_048223409.1
type: Protein
SIO_000068: ncbiprotein

position:970857:-1
position: 970857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973010:-1
position: 973010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970857-973010:-1:exon

Egln1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Egln1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(972670..1007355)
location: region:972670-1007355:-1
so has part: feature:972670-1007355:-1:exon
subclass of: SO_0000010

125366756
type: Gene
SIO_000068: ncbigene

position:972670:-1
position: 972670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007355:-1
position: 1007355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972670-1007355:-1:exon

Egln1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Egln1
product: egl-9 family hypoxia inducible factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048367454.1
SIO_010081: Egln1
subclass of: SO_0000673
so part of: Egln1
location: complement(join(972670..972691,972893..972902,988339..988430,989168..989235,990415..990551,991573..991692,1006612..1007355))
location: region:972670-1007355:-1
so has part: feature:1006612-1007355:-1:exon
so has part: feature:991573-991692:-1:exon
so has part: feature:990415-990551:-1:exon
so has part: feature:989168-989235:-1:exon
so has part: feature:988339-988430:-1:exon
so has part: feature:972893-972902:-1:exon
so has part: feature:972670-972691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1006612-1007355:-1:exon

position:1006612:-1
position: 1006612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:991573-991692:-1:exon

position:991573:-1
position: 991573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991692:-1
position: 991692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:990415-990551:-1:exon

position:990415:-1
position: 990415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990551:-1
position: 990551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:989168-989235:-1:exon

position:989168:-1
position: 989168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989235:-1
position: 989235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:988339-988430:-1:exon

position:988339:-1
position: 988339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988430:-1
position: 988430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:972893-972902:-1:exon

position:972893:-1
position: 972893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972902:-1
position: 972902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:972670-972691:-1:exon

position:972691:-1
position: 972691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sprtn
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Sprtn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 973385..981362
location: region:973385-981362:1
so has part: feature:973385-981362:1:exon
subclass of: SO_0000010

125366757
type: Gene
SIO_000068: ncbigene

position:973385:1
position: 973385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981362:1
position: 981362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:973385-981362:1:exon

Sprtn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sprtn
product: SprT-like N-terminal domain
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048367455.1
SIO_010081: Sprtn
subclass of: SO_0000673
so part of: Sprtn
location: join(973385..973881,974373..974472,976581..976709,978280..978549,979995..981362)
location: region:973385-981362:1
so has part: feature:973385-973881:1:exon
so has part: feature:974373-974472:1:exon
so has part: feature:976581-976709:1:exon
so has part: feature:978280-978549:1:exon
so has part: feature:979995-981362:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:973385-973881:1:exon

position:973881:1
position: 973881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:974373-974472:1:exon

position:974373:1
position: 974373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974472:1
position: 974472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:976581-976709:1:exon

position:976581:1
position: 976581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976709:1
position: 976709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:978280-978549:1:exon

position:978280:1
position: 978280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978549:1
position: 978549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:979995-981362:1:exon

position:979995:1
position: 979995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sprtn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sprtn
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: DNA-dependent metalloprotease SPRTN
translation: MDEDLVVALRLQREWDARAAQREAAREPPSLVDASWELVDPTPDLQALFVQFNDRFFWGRLEAVEVKWSVRMTLCAGICLYEGRGGMCSIRLSEPLLKLRPRKDLVETLLHEMIHAYLFVTDNDKDREGHGPEFCKHMRRINDLTGANITIYHSFHDEVEEYRRHWWRCDGPCQHRQPYHGYVKRATNRAPSRHDYWWAEHQKTCGGTFVKVREPESHARKGKRKAKAEPPPGPAVESQGDGRRAAPQLVPFSGERLRPRGDRPPPPRPLRGEAPPGAGRQSVLSSYFPPKAFRSVSVPSLASPRPSPPPGAHGARLGVPGDPQARGPSGRPQTAPAGARGGFGRPCRREGAGARAPAGPGAGSRVVSCPVCLGAVAEAQINQHLDLCLEGTAGTPGAAGSEVGRGSPRPEVL
SIO_010081: Sprtn
subclass of: SO_0000673
so part of: Sprtn
location: join(973661..973881,974373..974472,976581..976709,978280..978549,979995..980518)
location: region:973661-980518:1
so has part: feature:973661-973881:1:exon
so has part: feature:974373-974472:1:exon
so has part: feature:976581-976709:1:exon
so has part: feature:978280-978549:1:exon
so has part: feature:979995-980518:1:exon

XP_048223412.1
type: Protein
SIO_000068: ncbiprotein

position:973661:1
position: 973661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980518:1
position: 980518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:973661-973881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974373-974472:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:976581-976709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978280-978549:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979995-980518:1:exon

Egln1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Egln1
product: egl-9 family hypoxia inducible factor 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367453.1
SIO_010081: Egln1
subclass of: SO_0000673
so part of: Egln1
location: complement(join(986669..988430,989168..989235,990415..990551,991573..991692,1006612..1007355))
location: region:986669-1007355:-1
so has part: feature:1006612-1007355:-1:exon
so has part: feature:991573-991692:-1:exon
so has part: feature:990415-990551:-1:exon
so has part: feature:989168-989235:-1:exon
so has part: feature:986669-988430:-1:exon

position:986669:-1
position: 986669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1006612-1007355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991573-991692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990415-990551:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:989168-989235:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986669-988430:-1:exon

Egln1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Egln1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: egl nine homolog 1
translation: MASDSGGPGAAGAGERDRQYCELCGKMENLMRCGRCRSSFYCSKEHQRRDWKKHKLVCAGGEAGAGAGPPAAGAAAAGAARPDAARRRPPPAPARRSPGPERAGPCPAAAGEALSPGGGGGGGPARPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGRDTGQRIGDEVRALHDTGRFTDGQLVSQKSDSSKDIRGDQITWVEGKEPGCQTIGLLMSSMDDLIRHCSGKLGNYRINGRTKAMVACYPGNGTGYVRHVDNPNEDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPPESISKDAQ
SIO_010081: Egln1
subclass of: SO_0000673
so part of: Egln1
location: complement(join(988366..988430,989168..989235,990415..990551,991573..991692,1006612..1007340))
location: region:988366-1007340:-1
so has part: feature:1006612-1007340:-1:exon
so has part: feature:991573-991692:-1:exon
so has part: feature:990415-990551:-1:exon
so has part: feature:989168-989235:-1:exon
so has part: feature:988366-988430:-1:exon

XP_048223410.1
type: Protein
SIO_000068: ncbiprotein

position:988366:-1
position: 988366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007340:-1
position: 1007340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1006612-1007340:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991573-991692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990415-990551:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:989168-989235:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988366-988430:-1:exon

Egln1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Egln1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: egl nine homolog 1
translation: MASDSGGPGAAGAGERDRQYCELCGKMENLMRCGRCRSSFYCSKEHQRRDWKKHKLVCAGGEAGAGAGPPAAGAAAAGAARPDAARRRPPPAPARRSPGPERAGPCPAAAGEALSPGGGGGGGPARPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGRDTGQRIGDEVRALHDTGRFTDGQLVSQKSDSSKDIRGDQITWVEGKEPGCQTIGLLMSSMDDLIRHCSGKLGNYRINGRTKAMVACYPGNGTGYVRHVDNPNEDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPPESISKDAQ
SIO_010081: Egln1
subclass of: SO_0000673
so part of: Egln1
location: complement(join(988366..988430,989168..989235,990415..990551,991573..991692,1006612..1007340))
location: region:988366-1007340:-1
so has part: feature:1006612-1007340:-1:exon
so has part: feature:991573-991692:-1:exon
so has part: feature:990415-990551:-1:exon
so has part: feature:989168-989235:-1:exon
so has part: feature:988366-988430:-1:exon

XP_048223411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1006612-1007340:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991573-991692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990415-990551:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:989168-989235:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988366-988430:-1:exon

Tsnax
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tsnax
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1028393..1041483
location: region:1028393-1041483:1
so has part: feature:1028393-1041483:1:exon
subclass of: SO_0000010

125366758
type: Gene
SIO_000068: ncbigene

position:1028393:1
position: 1028393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041483:1
position: 1041483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028393-1041483:1:exon

Tsnax
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tsnax
product: translin associated factor X
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367456.1
SIO_010081: Tsnax
subclass of: SO_0000673
so part of: Tsnax
location: join(1028393..1028475,1028929..1029027,1030440..1030554,1034353..1034483,1037902..1038029,1039923..1041483)
location: region:1028393-1041483:1
so has part: feature:1028393-1028475:1:exon
so has part: feature:1028929-1029027:1:exon
so has part: feature:1030440-1030554:1:exon
so has part: feature:1034353-1034483:1:exon
so has part: feature:1037902-1038029:1:exon
so has part: feature:1039923-1041483:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1028393-1028475:1:exon

position:1028475:1
position: 1028475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1028929-1029027:1:exon

position:1028929:1
position: 1028929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029027:1
position: 1029027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1030440-1030554:1:exon

position:1030440:1
position: 1030440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030554:1
position: 1030554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1034353-1034483:1:exon

position:1034353:1
position: 1034353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034483:1
position: 1034483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1037902-1038029:1:exon

position:1037902:1
position: 1037902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038029:1
position: 1038029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1039923-1041483:1:exon

position:1039923:1
position: 1039923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tsnax
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tsnax
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translin-associated protein X
translation: MSGKEGGFRKRKHDNFPHSQRREAKDVNSSSPVMLAFKSFQLELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEEILAESEIKLDGVRQKILQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMEEINKQLIFTTEDSGKENKTPTSDAQMKQPVTWSLKVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYALKVRGSEIPKHMLADVFSVKTEMIDQEEGVS
SIO_010081: Tsnax
subclass of: SO_0000673
so part of: Tsnax
location: join(1028460..1028475,1028929..1029027,1030440..1030554,1034353..1034483,1037902..1038029,1039923..1040300)
location: region:1028460-1040300:1
so has part: feature:1028460-1028475:1:exon
so has part: feature:1028929-1029027:1:exon
so has part: feature:1030440-1030554:1:exon
so has part: feature:1034353-1034483:1:exon
so has part: feature:1037902-1038029:1:exon
so has part: feature:1039923-1040300:1:exon

XP_048223413.1
type: Protein
SIO_000068: ncbiprotein

position:1028460:1
position: 1028460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040300:1
position: 1040300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028460-1028475:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1028929-1029027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1030440-1030554:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1034353-1034483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1037902-1038029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1039923-1040300:1:exon

LOC125367319
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367319
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1103611..1109949)
location: region:1103611-1109949:-1
so has part: feature:1103611-1109949:-1:exon
subclass of: SO_0000010

125367319
type: Gene
SIO_000068: ncbigene

position:1103611:-1
position: 1103611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109949:-1
position: 1109949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103611-1109949:-1:exon

LOC125367319
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125367319
product: proteoglycan 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048367987.1
SIO_010081: LOC125367319
subclass of: SO_0000673
so part of: LOC125367319
location: complement(join(1103611..1104359,1104500..1104695,1106145..1106489,1107446..1107972,1108372..1108506,1108643..1108758,1109915..1109949))
location: region:1103611-1109949:-1
so has part: feature:1109915-1109949:-1:exon
so has part: feature:1108643-1108758:-1:exon
so has part: feature:1108372-1108506:-1:exon
so has part: feature:1107446-1107972:-1:exon
so has part: feature:1106145-1106489:-1:exon
so has part: feature:1104500-1104695:-1:exon
so has part: feature:1103611-1104359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1109915-1109949:-1:exon

position:1109915:-1
position: 1109915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1108643-1108758:-1:exon

position:1108643:-1
position: 1108643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108758:-1
position: 1108758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1108372-1108506:-1:exon

position:1108372:-1
position: 1108372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108506:-1
position: 1108506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1107446-1107972:-1:exon

position:1107446:-1
position: 1107446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107972:-1
position: 1107972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1106145-1106489:-1:exon

position:1106145:-1
position: 1106145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106489:-1
position: 1106489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1104500-1104695:-1:exon

position:1104500:-1
position: 1104500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104695:-1
position: 1104695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1103611-1104359:-1:exon

position:1104359:-1
position: 1104359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125367319
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125367319
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteoglycan 4-like
translation: MDPQVCKVGTLGRGDRLRPGREEGQQLRRSQGPLPSRRTRADGRSEPGALASGCGAPEGSVLPAEPRSAGAGRRAQSEQETSRKQDVEAGAADTARRRDPRSTPGFPVSPRLLRRPPVPARGLPSTADTGTLTTDPGRAYARVLQRRARLTPRLRCPEARGEEAGGREARGERPAQDRRPRGTPEGSVHASSAPDVTGWRCDWGGGAPGLPHPVSTSHGPGAKPEVGRHGPPRPGPEENRPASSRPVPATLSRPIPSPYTGCGSGFGAPVSVRGTNQESPPPTIPPREPTATIPPREPTATTPPREFTCHHSTKRAHCHHSSKRAHCHYSTKRAHCHYSTKRAHLPLFHQESPLPLFHQESPPATTPPREPTATTRGTGFSSPPDPSASTAPLASRTLRPRAQGITGDSPRVCARFGEAPPGPSEARPPPAPAPHQALPPPRRSAPATQPPAVRRSRRRQSSGRIDACCSPSPAARLPSRFPCHPAARSGAAPLRSPPSTQHPSGAAPLRSSPSTQHPASKWSRSPAVTTQHPAPERSRSPAVTTQHPAPSTTPERSRSPAVTTQHPAPSTQHPSRAAPLRLPPSTAPERSRSPAVTTQHPAPSTQHPSGAAPLRSPPSTQHPAPKWSRSPAVTTQHPAPSTQVEPLPCGHHPAPSTQHPSGAAPLRSPPSTQHPSGAAPLRLPPSTAPVPGGLCSALPG
SIO_010081: LOC125367319
subclass of: SO_0000673
so part of: LOC125367319
location: complement(join(1103611..1104359,1104500..1104695,1106145..1106489,1107446..1107972,1108372..1108506,1108643..1108758,1109915..1109949))
location: region:1103611-1109949:-1
so has part: feature:1109915-1109949:-1:exon
so has part: feature:1108643-1108758:-1:exon
so has part: feature:1108372-1108506:-1:exon
so has part: feature:1107446-1107972:-1:exon
so has part: feature:1106145-1106489:-1:exon
so has part: feature:1104500-1104695:-1:exon
so has part: feature:1103611-1104359:-1:exon

XP_048223944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1109915-1109949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1108643-1108758:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1108372-1108506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1107446-1107972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1106145-1106489:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1104500-1104695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1103611-1104359:-1:exon

Sipa1l2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Sipa1l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1127636..1257236)
location: region:1127636-1257236:-1
so has part: feature:1127636-1257236:-1:exon
subclass of: SO_0000010

125366705
type: Gene
SIO_000068: ncbigene

position:1127636:-1
position: 1127636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257236:-1
position: 1257236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1127636-1257236:-1:exon

Sipa1l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Sipa1l2
product: signal induced proliferation associated 1 like 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048367379.1
SIO_010081: Sipa1l2
subclass of: SO_0000673
so part of: Sipa1l2
location: complement(join(1127636..1127811,1128079..1128160,1128721..1128844,1129338..1129391,1136833..1136964,1141272..1141491,1143094..1143241,1146778..1147002,1148850..1149304,1151083..1151186,1151881..1151981,1153384..1153467,1154853..1155110,1160851..1161125,1164317..1164893,1165198..1165355,1170886..1170989,1172199..1172373,1173361..1173549,1174434..1174567,1183925..1185623,1257052..1257236))
location: region:1127636-1257236:-1
so has part: feature:1257052-1257236:-1:exon
so has part: feature:1183925-1185623:-1:exon
so has part: feature:1174434-1174567:-1:exon
so has part: feature:1173361-1173549:-1:exon
so has part: feature:1172199-1172373:-1:exon
so has part: feature:1170886-1170989:-1:exon
so has part: feature:1165198-1165355:-1:exon
so has part: feature:1164317-1164893:-1:exon
so has part: feature:1160851-1161125:-1:exon
so has part: feature:1154853-1155110:-1:exon
so has part: feature:1153384-1153467:-1:exon
so has part: feature:1151881-1151981:-1:exon
so has part: feature:1151083-1151186:-1:exon
so has part: feature:1148850-1149304:-1:exon
so has part: feature:1146778-1147002:-1:exon
so has part: feature:1143094-1143241:-1:exon
so has part: feature:1141272-1141491:-1:exon
so has part: feature:1136833-1136964:-1:exon
so has part: feature:1129338-1129391:-1:exon
so has part: feature:1128721-1128844:-1:exon
so has part: feature:1128079-1128160:-1:exon
so has part: feature:1127636-1127811:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1257052-1257236:-1:exon

position:1257052:-1
position: 1257052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1183925-1185623:-1:exon

position:1183925:-1
position: 1183925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185623:-1
position: 1185623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1174434-1174567:-1:exon

position:1174434:-1
position: 1174434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174567:-1
position: 1174567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1173361-1173549:-1:exon

position:1173361:-1
position: 1173361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173549:-1
position: 1173549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1172199-1172373:-1:exon

position:1172199:-1
position: 1172199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172373:-1
position: 1172373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1170886-1170989:-1:exon

position:1170886:-1
position: 1170886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170989:-1
position: 1170989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1165198-1165355:-1:exon

position:1165198:-1
position: 1165198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165355:-1
position: 1165355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1164317-1164893:-1:exon

position:1164317:-1
position: 1164317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164893:-1
position: 1164893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1160851-1161125:-1:exon

position:1160851:-1
position: 1160851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161125:-1
position: 1161125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1154853-1155110:-1:exon

position:1154853:-1
position: 1154853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155110:-1
position: 1155110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1153384-1153467:-1:exon

position:1153384:-1
position: 1153384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153467:-1
position: 1153467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1151881-1151981:-1:exon

position:1151881:-1
position: 1151881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151981:-1
position: 1151981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1151083-1151186:-1:exon

position:1151083:-1
position: 1151083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151186:-1
position: 1151186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1148850-1149304:-1:exon

position:1148850:-1
position: 1148850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149304:-1
position: 1149304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1146778-1147002:-1:exon

position:1146778:-1
position: 1146778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147002:-1
position: 1147002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1143094-1143241:-1:exon

position:1143094:-1
position: 1143094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143241:-1
position: 1143241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1141272-1141491:-1:exon

position:1141272:-1
position: 1141272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141491:-1
position: 1141491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1136833-1136964:-1:exon

position:1136833:-1
position: 1136833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136964:-1
position: 1136964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1129338-1129391:-1:exon

position:1129338:-1
position: 1129338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1129391:-1
position: 1129391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1128721-1128844:-1:exon

position:1128721:-1
position: 1128721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1128844:-1
position: 1128844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1128079-1128160:-1:exon

position:1128079:-1
position: 1128079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1128160:-1
position: 1128160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1127636-1127811:-1:exon

position:1127811:-1
position: 1127811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sipa1l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Sipa1l2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: signal-induced proliferation-associated 1-like protein 2
translation: MSDPRQLQTERHKRGRVATKLKDTPGIMQSDDYFARKFKAINGNIGTATSLSISSPSESGGPANGTPAVPKMGVRARVSEWPPKKDCSKDLACKTLWESRSQSSYESVTSMLQNGQSDQGDAQHEEQLDLDFVEAKYTLGDLFIHSSQRGLHPIRQRSNSDVTISDVDGEDVLDQRAVNPNTGAALRREYGSTSSIDRQGLSGENFFAMLRGYRVDNYDPKAASPFGFPEFFPCDPAISPSLHAAAQIARGELVRISALDYMDSALLMGRDRNKPFKRRLKSESVETSLFRKLRTVKSEHEAFKFTSDLEEGRLERGARPWSCQRCFAHYDVQSILFNINEAMATRASVGKRKNITTGASAASQTPAAAGPVGSCESPLGSKEDLNSKENLDADEGDGKSNDLVLSCPYFRNETGGEGDRRIALSRANSASFSAGESCSFESSLSSHCTNAGVSVLEVPRESQPVHREKVKRYIIEHIDLGAYYYRKFFYGKEHQNYFGIDENLGPVAVSIRREKVEEVKEKEGPQFNYRVAFRTSELTTLRGAILEDAVPSTARHGTARGLPLKEVLEFVVPELSIQCLRQASSSPKVPEQLLKLDEQGLSFQHKIGVLYCKAGQSTEEEMYNNETAGPAFDEFLDLLGQRVRLKGFSKYRAQLDNKTDSTGTHSLYTTYKDYELMFHVSTLLPYMPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPKNIRSHFQHVFVIVKVHNPCTENVCYSVGVSRSKDVPSFGPPIPKGVTFPKSAVFRDFLLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAENFVTTATVDTSAKFSFITLGAKKKERVKPRKDAHLFSIGAILWRVVARDFGQSADIECLLGISNEFIMLIETDSKNVVFNCSSRDVIGWTSGLVSIKVFYERGECILLSSVDSRAEDIREIVQRLVIVTRGCETVEMTLRRNGLGQLGFHVNFEGIVADVEPFGFAWKAGLRQGSRLVEICKVAVATLTHEQMIDLLRTSVTVKVVIIQPHDDGSPRRGCSELCRIPMVEYKLDSEGTPCEYKTPFRRNTTWHRVPTPALQPVSRASPVPGTPDRLQCQPLLPQAQAAIPRSTSFDRKLPDGTRSSPSNQSSSSDPGPGGSGPWRPQMGYDGCPSPLLMEHQGPGALECDGSREHEDAMDGSRHPETKWHGPPSKVLSSYKERALQKDGSCKDSPNKLCHMGDKSCSSPSSSNTLSSNTSSSSEDKHFGSGDLMDPELLGLTYIKGASTDSGIDTTPCLSATVLGPVHLAGSRSLIHSRAEQWADAADISGPADEPAKLYAVHGYPAAISTGGADDEPAKLYAMHGYPAAISTGGAAGGSTGDLSEISSHSSGSHHSGSPSAHCSKSSGSLDSSKVYIVSHSSGQQAPGSTSKPYHRQGVASTYVIGWKKSEGSPPPEEPEVTGCPGMYSEMDDLAPARHQAVGDPASETQHVLSKEDFLKLMLPGSPSVGEGRRKFLFYGNLSPRRSLYRTLSDESVCSNRRGSSFGGSRSSILDQALPNDILFSTTPPYHSTLPPRTQPAPGMGTLRNEFWFSDGSLSEKSKCTDPGLMPLPDTATGLDWSHLVDAARAFEGLDSDEEPGLLCHHASCLDQRVASFCTLTDLQHGQDLEGAPELPLCVDPSSSKEFMDTAGERSPSTLTGKVNQLELILRQLQTDLRKEKQDKAVLQAEVQHLRQDNLRLQEESQTATAQLRKFTEWFFSTMDKKA
SIO_010081: Sipa1l2
subclass of: SO_0000673
so part of: Sipa1l2
location: complement(join(1127665..1127811,1128079..1128160,1128721..1128844,1129338..1129391,1136833..1136964,1141272..1141491,1143094..1143241,1146778..1147002,1148850..1149304,1151083..1151186,1151881..1151981,1153384..1153467,1154853..1155110,1160851..1161125,1164317..1164893,1165198..1165355,1170886..1170989,1172199..1172373,1173361..1173549,1174434..1174567,1183925..1185402))
location: region:1127665-1185402:-1
so has part: feature:1183925-1185402:-1:exon
so has part: feature:1174434-1174567:-1:exon
so has part: feature:1173361-1173549:-1:exon
so has part: feature:1172199-1172373:-1:exon
so has part: feature:1170886-1170989:-1:exon
so has part: feature:1165198-1165355:-1:exon
so has part: feature:1164317-1164893:-1:exon
so has part: feature:1160851-1161125:-1:exon
so has part: feature:1154853-1155110:-1:exon
so has part: feature:1153384-1153467:-1:exon
so has part: feature:1151881-1151981:-1:exon
so has part: feature:1151083-1151186:-1:exon
so has part: feature:1148850-1149304:-1:exon
so has part: feature:1146778-1147002:-1:exon
so has part: feature:1143094-1143241:-1:exon
so has part: feature:1141272-1141491:-1:exon
so has part: feature:1136833-1136964:-1:exon
so has part: feature:1129338-1129391:-1:exon
so has part: feature:1128721-1128844:-1:exon
so has part: feature:1128079-1128160:-1:exon
so has part: feature:1127665-1127811:-1:exon

XP_048223336.1
type: Protein
SIO_000068: ncbiprotein

position:1127665:-1
position: 1127665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185402:-1
position: 1185402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183925-1185402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1174434-1174567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1173361-1173549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1172199-1172373:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1170886-1170989:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1165198-1165355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1164317-1164893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1160851-1161125:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1154853-1155110:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1153384-1153467:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1151881-1151981:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1151083-1151186:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1148850-1149304:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1146778-1147002:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1143094-1143241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1141272-1141491:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1136833-1136964:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1129338-1129391:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1128721-1128844:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1128079-1128160:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1127665-1127811:-1:exon

LOC125366706
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125366706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1166981..1169222
location: region:1166981-1169222:1
so has part: feature:1166981-1169222:1:exon
subclass of: SO_0000011

125366706
type: Gene
SIO_000068: ncbigene

position:1166981:1
position: 1166981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1169222:1
position: 1169222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1166981-1169222:1:exon

LOC125366706
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125366706
product: uncharacterized LOC125366706
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007213955.1
SIO_010081: LOC125366706
subclass of: SO_0000673
so part of: LOC125366706
location: join(1166981..1167357,1169054..1169056,1169212..1169222)
location: region:1166981-1169222:1
so has part: feature:1166981-1167357:1:exon
so has part: feature:1169054-1169056:1:exon
so has part: feature:1169212-1169222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1166981-1167357:1:exon

position:1167357:1
position: 1167357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1169054-1169056:1:exon

position:1169054:1
position: 1169054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1169056:1
position: 1169056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1169212-1169222:1:exon

position:1169212:1
position: 1169212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Map10
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Map10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1313531..1316827
location: region:1313531-1316827:1
so has part: feature:1313531-1316827:1:exon
subclass of: SO_0000010

125367320
type: Gene
SIO_000068: ncbigene

position:1313531:1
position: 1313531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316827:1
position: 1316827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1313531-1316827:1:exon

Map10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Map10
product: microtubule associated protein 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048367988.1
SIO_010081: Map10
subclass of: SO_0000673
so part of: Map10
location: join(1313531..1313855,1313934..1314067,1314125..1316827)
location: region:1313531-1316827:1
so has part: feature:1313531-1313855:1:exon
so has part: feature:1313934-1314067:1:exon
so has part: feature:1314125-1316827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1313531-1313855:1:exon

position:1313855:1
position: 1313855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1313934-1314067:1:exon

position:1313934:1
position: 1313934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314067:1
position: 1314067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1314125-1316827:1:exon

position:1314125:1
position: 1314125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Map10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Map10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein 10
translation: MAAGVAAAAAAERLFSLELLVDWVRLEAAPPPRAPGPALAFRLLDFPPLLVRAPPAAAAAAARPPPARRGAIGFGRGKACVFRLRPAALRRPRLRAALLLPPPPPAGPGLLGTCDIPLAAPAPGGRRGTFALRSPAGRRVGDLALFYRLRDLGPPGPGSAPDDGTHRPARRGDPPGSPPGTPGAELESAVNTFCPPPLYYTRRPRGKAPPAPAQITLEPGGLGAEDAEPASPPSPRPPRPPPPPEGAPGPPRAQPPPRAPPPPADALRQLPLLNALLTELSLLCRPPAPGPAPGPHPAWTDRTPVPRRPEPRGDPRPLGGSEERSPPRPQQGRAPGSGRGGRGRGAGRGRLLYGLTHTLRLRLRQTNPDMLAVHEKREQDRKRRARAAGAGLRAPSCKAGPPSWAEHSQRPRTLPGDRPSDARPSRPVGRVPGEPSTDPSQGRAEPAALRPGDLRRGGGPSGSALSPAGSTASERRVPPSPWGTSDLEGQSPCIFPQDAAGEIVGREVNHGQVIKPWTDNRSQSAAATDGTPSNRNCYADALECEYSDDFTSPCYSEDFHTPEDSSRSVQAHSHGGAGVTGQTHRACPRKPREARLPPRQSGSEESSLLSPPFSAGSPVPSHKRPHSKTPDRSTEDASSISSSDVASSSWTKKGEKHVDQTSTCTSKTVRTGKDVSIRRKAGAGRKCADKSQSPRTSQVSSYLPSNLSELELKDLESGSSDHFDEDDDGLCSLNTSKQYRDICELVINKLPGYTV
SIO_010081: Map10
subclass of: SO_0000673
so part of: Map10
location: join(1313531..1313855,1313934..1314067,1314125..1315933)
location: region:1313531-1315933:1
so has part: feature:1313531-1313855:1:exon
so has part: feature:1313934-1314067:1:exon
so has part: feature:1314125-1315933:1:exon

XP_048223945.1
type: Protein
SIO_000068: ncbiprotein

position:1315933:1
position: 1315933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1313531-1313855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1313934-1314067:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1314125-1315933:1:exon

Ntpcr
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ntpcr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1337017..1362055
location: region:1337017-1362055:1
so has part: feature:1337017-1362055:1:exon
subclass of: SO_0000010

125367159
type: Gene
SIO_000068: ncbigene

position:1337017:1
position: 1337017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362055:1
position: 1362055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337017-1362055:1:exon

Ntpcr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ntpcr
product: nucleoside-triphosphatase, cancer-related, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048367786.1
SIO_010081: Ntpcr
subclass of: SO_0000673
so part of: Ntpcr
location: join(1337017..1337062,1337403..1337565,1337916..1338012,1339560..1339769,1340249..1340333,1361999..1362055)
location: region:1337017-1362055:1
so has part: feature:1337017-1337062:1:exon
so has part: feature:1337403-1337565:1:exon
so has part: feature:1337916-1338012:1:exon
so has part: feature:1339560-1339769:1:exon
so has part: feature:1340249-1340333:1:exon
so has part: feature:1361999-1362055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1337017-1337062:1:exon

position:1337062:1
position: 1337062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1337403-1337565:1:exon

position:1337403:1
position: 1337403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337565:1
position: 1337565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1337916-1338012:1:exon

position:1337916:1
position: 1337916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1338012:1
position: 1338012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1339560-1339769:1:exon

position:1339560:1
position: 1339560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1339769:1
position: 1339769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1340249-1340333:1:exon

position:1340249:1
position: 1340249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340333:1
position: 1340333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1361999-1362055:1:exon

position:1361999:1
position: 1361999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ntpcr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ntpcr
product: nucleoside-triphosphatase, cancer-related, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367785.1
SIO_010081: Ntpcr
subclass of: SO_0000673
so part of: Ntpcr
location: join(1337017..1337062,1337403..1337565,1337916..1338012,1339560..1339769,1340249..1340333,1340372..1341257)
location: region:1337017-1341257:1
so has part: feature:1337017-1337062:1:exon
so has part: feature:1337403-1337565:1:exon
so has part: feature:1337916-1338012:1:exon
so has part: feature:1339560-1339769:1:exon
so has part: feature:1340249-1340333:1:exon
so has part: feature:1340372-1341257:1:exon

position:1341257:1
position: 1341257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337017-1337062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1337403-1337565:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1337916-1338012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339560-1339769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1340249-1340333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1340372-1341257:1:exon

position:1340372:1
position: 1340372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ntpcr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ntpcr
product: nucleoside-triphosphatase, cancer-related, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048367787.1
SIO_010081: Ntpcr
subclass of: SO_0000673
so part of: Ntpcr
location: join(1337017..1337062,1337403..1337565,1337916..1338012,1339564..1339769,1340249..1340362)
location: region:1337017-1340362:1
so has part: feature:1337017-1337062:1:exon
so has part: feature:1337403-1337565:1:exon
so has part: feature:1337916-1338012:1:exon
so has part: feature:1339564-1339769:1:exon
so has part: feature:1340249-1340362:1:exon

position:1340362:1
position: 1340362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337017-1337062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1337403-1337565:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1337916-1338012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339564-1339769:1:exon

position:1339564:1
position: 1339564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1340249-1340362:1:exon

Ntpcr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ntpcr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cancer-related nucleoside-triphosphatase isoform X1
translation: MARHVFLTGPPGVGKTTLIQKASRALQRSGVPVDGFYTEEVRQGGRRVGFDVVTLSGARGPLSRVGPEPLPGKPGCRVGPYVVDVASLEQLALPVLRSAGSGGGPGHSVCVIDEIGKMELFSQPFIQAVRQALGAPGTVILGTIPVPKGKPLALVEEIRSREDVTVLSVTKENRNHLLSEILSCVQSGRK
SIO_010081: Ntpcr
subclass of: SO_0000673
so part of: Ntpcr
location: join(1337029..1337062,1337403..1337565,1337916..1338012,1339560..1339769,1340249..1340317)
location: region:1337029-1340317:1
so has part: feature:1337029-1337062:1:exon
so has part: feature:1337403-1337565:1:exon
so has part: feature:1337916-1338012:1:exon
so has part: feature:1339560-1339769:1:exon
so has part: feature:1340249-1340317:1:exon

XP_048223742.1
type: Protein
SIO_000068: ncbiprotein

position:1337029:1
position: 1337029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340317:1
position: 1340317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337029-1337062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1337403-1337565:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1337916-1338012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339560-1339769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1340249-1340317:1:exon

Ntpcr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ntpcr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cancer-related nucleoside-triphosphatase isoform X1
translation: MARHVFLTGPPGVGKTTLIQKASRALQRSGVPVDGFYTEEVRQGGRRVGFDVVTLSGARGPLSRVGPEPLPGKPGCRVGPYVVDVASLEQLALPVLRSAGSGGGPGHSVCVIDEIGKMELFSQPFIQAVRQALGAPGTVILGTIPVPKGKPLALVEEIRSREDVTVLSVTKENRNHLLSEILSCVQSGRK
SIO_010081: Ntpcr
subclass of: SO_0000673
so part of: Ntpcr
location: join(1337029..1337062,1337403..1337565,1337916..1338012,1339560..1339769,1340249..1340317)
location: region:1337029-1340317:1
so has part: feature:1337029-1337062:1:exon
so has part: feature:1337403-1337565:1:exon
so has part: feature:1337916-1338012:1:exon
so has part: feature:1339560-1339769:1:exon
so has part: feature:1340249-1340317:1:exon

XP_048223743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1337029-1337062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1337403-1337565:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1337916-1338012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339560-1339769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1340249-1340317:1:exon

Ntpcr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ntpcr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cancer-related nucleoside-triphosphatase isoform X2
translation: MARHVFLTGPPGVGKTTLIQKASRALQRSGVPVDGFYTEEVRQGGRRVGFDVVTLSGARGPLSRVGPEPLPGKPGCRVGPYVVDVASLEQLALPVLRSVLAEAQGTVCASSTRSARWSSSASPSSRQSARRWARPGRSSWAPSPSPRASRWRWWRRSGAGRT
SIO_010081: Ntpcr
subclass of: SO_0000673
so part of: Ntpcr
location: join(1337029..1337062,1337403..1337565,1337916..1338012,1339564..1339758)
location: region:1337029-1339758:1
so has part: feature:1337029-1337062:1:exon
so has part: feature:1337403-1337565:1:exon
so has part: feature:1337916-1338012:1:exon
so has part: feature:1339564-1339758:1:exon

XP_048223744.1
type: Protein
SIO_000068: ncbiprotein

position:1339758:1
position: 1339758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337029-1337062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1337403-1337565:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1337916-1338012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339564-1339758:1:exon

Kcnk1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Kcnk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1444397..1450360
location: region:1444397-1450360:1
so has part: feature:1444397-1450360:1:exon
subclass of: SO_0000010

125367323
type: Gene
SIO_000068: ncbigene

position:1444397:1
position: 1444397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1450360:1
position: 1450360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1444397-1450360:1:exon

Kcnk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Kcnk1
product: potassium two pore domain channel subfamily K member 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048367995.1
SIO_010081: Kcnk1
subclass of: SO_0000673
so part of: Kcnk1
location: join(1444397..1444453,1444981..1445492,1450097..1450360)
location: region:1444397-1450360:1
so has part: feature:1444397-1444453:1:exon
so has part: feature:1444981-1445492:1:exon
so has part: feature:1450097-1450360:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1444397-1444453:1:exon

position:1444453:1
position: 1444453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1444981-1445492:1:exon

position:1444981:1
position: 1444981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445492:1
position: 1445492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1450097-1450360:1:exon

position:1450097:1
position: 1450097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Kcnk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Kcnk1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: potassium channel subfamily K member 1
translation: MTDKRERTQGTVGSREPISGRRGGAGSAGHAWPPPSWVSLPRPPPGPLPTRRLSPPAGYGHTVPLSDGGKAFCIVYSVLGIPFTLLFLTAVVQRVTVHVSRRHVLYVHLRWGFSRQMVALAHAVLLGVVTVACFFFIPAAVFSVLEEDWNFLESFYFCFISLSTIGLGDYVPGEGYNQRFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKDEDEDQVRIVEEDQLSFSSLAEQAAGAKEAQRQNEPFAGTPAPDGPDGSVNH
SIO_010081: Kcnk1
subclass of: SO_0000673
so part of: Kcnk1
location: join(1444397..1444453,1444981..1445492,1450097..1450356)
location: region:1444397-1450356:1
so has part: feature:1444397-1444453:1:exon
so has part: feature:1444981-1445492:1:exon
so has part: feature:1450097-1450356:1:exon

XP_048223952.1
type: Protein
SIO_000068: ncbiprotein

position:1450356:1
position: 1450356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1444397-1444453:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1444981-1445492:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1450097-1450356:1:exon

Slc35f3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Slc35f3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1502966..1530880
location: region:1502966-1530880:1
so has part: feature:1502966-1530880:1:exon
subclass of: SO_0000010

125367324
type: Gene
SIO_000068: ncbigene

position:1502966:1
position: 1502966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1530880:1
position: 1530880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1502966-1530880:1:exon

Slc35f3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Slc35f3
product: solute carrier family 35 member F3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048367996.1
SIO_010081: Slc35f3
subclass of: SO_0000673
so part of: Slc35f3
location: join(1502966..1502990,1503462..1503786,1521461..1521680,1526351..1526476,1526800..1526992,1527897..1527986,1530645..1530880)
location: region:1502966-1530880:1
so has part: feature:1502966-1502990:1:exon
so has part: feature:1503462-1503786:1:exon
so has part: feature:1521461-1521680:1:exon
so has part: feature:1526351-1526476:1:exon
so has part: feature:1526800-1526992:1:exon
so has part: feature:1527897-1527986:1:exon
so has part: feature:1530645-1530880:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1502966-1502990:1:exon

position:1502990:1
position: 1502990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1503462-1503786:1:exon

position:1503462:1
position: 1503462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1503786:1
position: 1503786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1521461-1521680:1:exon

position:1521461:1
position: 1521461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1521680:1
position: 1521680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1526351-1526476:1:exon

position:1526351:1
position: 1526351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1526476:1
position: 1526476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1526800-1526992:1:exon

position:1526800:1
position: 1526800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1526992:1
position: 1526992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1527897-1527986:1:exon

position:1527897:1
position: 1527897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1527986:1
position: 1527986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1530645-1530880:1:exon

position:1530645:1
position: 1530645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slc35f3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Slc35f3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative thiamine transporter SLC35F3
translation: MGLEAMGRREERPRDPPGPAEPRRRRGRRPGGKTSRPRWTCSRARLKKTLWGVAVVLCVCASWAGSTQLAKVTFRTFDAPFTLTWFATNWNFLFFPLYYVGHVCQSAEKQSVKQRYRDCCGLFGENGLTLKVFFTKAAPFGVLWTLTNYLYLHAIKKINTTDVSVLFCCNKAFVFLLSWTVLRDRFMGVRIVAAILAIAGIVMMTYADGFHSHSVIGIALVVGSASTSALYKVLFKLLLGSAQFGEAALFLSVLAVFNLLFVTGVPVVLYFTKVEHWSSFADVPWGSLCGFSLLLLTFNVVLNFGIAVTSPTLMSLGIVLSVPVNAVVDRYTSEIVFNGVRVVAIAIIGLGFLLLLLPEEWDLWLIGLLTRLKVRKKDEAAEAAGDPGSAPLGRSRRARPSFAR
SIO_010081: Slc35f3
subclass of: SO_0000673
so part of: Slc35f3
location: join(1502966..1502990,1503462..1503786,1521461..1521680,1526351..1526476,1526800..1526992,1527897..1527986,1530645..1530880)
location: region:1502966-1530880:1
so has part: feature:1502966-1502990:1:exon
so has part: feature:1503462-1503786:1:exon
so has part: feature:1521461-1521680:1:exon
so has part: feature:1526351-1526476:1:exon
so has part: feature:1526800-1526992:1:exon
so has part: feature:1527897-1527986:1:exon
so has part: feature:1530645-1530880:1:exon

XP_048223953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1502966-1502990:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1503462-1503786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1521461-1521680:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1526351-1526476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1526800-1526992:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1527897-1527986:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1530645-1530880:1:exon

LOC125367112
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367112
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1542620..1545981
location: region:1542620-1545981:1
so has part: feature:1542620-1545981:1:exon
subclass of: SO_0000010

125367112
type: Gene
SIO_000068: ncbigene

position:1542620:1
position: 1542620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1545981:1
position: 1545981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1542620-1545981:1:exon

LOC125367112
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125367112
product: cytochrome c oxidase assembly factor 6 homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367726.1
SIO_010081: LOC125367112
subclass of: SO_0000673
so part of: LOC125367112
location: join(1542620..1542823,1545632..1545981)
location: region:1542620-1545981:1
so has part: feature:1542620-1542823:1:exon
so has part: feature:1545632-1545981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1542620-1542823:1:exon

position:1542823:1
position: 1542823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1545632-1545981:1:exon

position:1545632:1
position: 1545632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125367112
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125367112
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly factor 6 homolog
translation: MAAPTRRERQVCWGARDRYWRCLDENAEDAARCRALRSSFEDSCPAQWIKYFDIRRDYLKFKEKFEAGEFEPSNQLQIPRLFLNFLQGLKRFFLLIQRCCAASRTA
SIO_010081: LOC125367112
subclass of: SO_0000673
so part of: LOC125367112
location: join(1542680..1542823,1545632..1545808)
location: region:1542680-1545808:1
so has part: feature:1542680-1542823:1:exon
so has part: feature:1545632-1545808:1:exon

XP_048223683.1
type: Protein
SIO_000068: ncbiprotein

position:1542680:1
position: 1542680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1545808:1
position: 1545808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1542680-1542823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1545632-1545808:1:exon

Tarbp1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tarbp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1547017..1582948)
location: region:1547017-1582948:-1
so has part: feature:1547017-1582948:-1:exon
subclass of: SO_0000010

125367325
type: Gene
SIO_000068: ncbigene

position:1547017:-1
position: 1547017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582948:-1
position: 1582948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1547017-1582948:-1:exon

Tarbp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tarbp1
product: TAR (HIV-1) RNA binding protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 8 bases in 8 codons; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048367997.1
SIO_010081: Tarbp1
subclass of: SO_0000673
so part of: Tarbp1
location: complement(join(1547017..1547240,1547415..1547550,1548225..1548348,1548472..1548698,1549681..1549798,1550707..1550787,1551343..1551537,1553030..1553116,1553637..1553786,1554061..1554171,1556021..1556141,1557944..1558015,1558229..1558416,1560926..1561114,1561308..1561527,1562460..1562671,1563537..1563698,1564586..1564683,1568249..1568421,1569218..1569317,1570146..1570281,1571269..1571358,1572214..1572310,1572927..1573062,1575350..1575447,1577047..1577099,1578258..1578406,1580654..1580723,1581742..1581839,1582069..1582948))
location: region:1547017-1582948:-1
so has part: feature:1582069-1582948:-1:exon
so has part: feature:1581742-1581839:-1:exon
so has part: feature:1580654-1580723:-1:exon
so has part: feature:1578258-1578406:-1:exon
so has part: feature:1577047-1577099:-1:exon
so has part: feature:1575350-1575447:-1:exon
so has part: feature:1572927-1573062:-1:exon
so has part: feature:1572214-1572310:-1:exon
so has part: feature:1571269-1571358:-1:exon
so has part: feature:1570146-1570281:-1:exon
so has part: feature:1569218-1569317:-1:exon
so has part: feature:1568249-1568421:-1:exon
so has part: feature:1564586-1564683:-1:exon
so has part: feature:1563537-1563698:-1:exon
so has part: feature:1562460-1562671:-1:exon
so has part: feature:1561308-1561527:-1:exon
so has part: feature:1560926-1561114:-1:exon
so has part: feature:1558229-1558416:-1:exon
so has part: feature:1557944-1558015:-1:exon
so has part: feature:1556021-1556141:-1:exon
so has part: feature:1554061-1554171:-1:exon
so has part: feature:1553637-1553786:-1:exon
so has part: feature:1553030-1553116:-1:exon
so has part: feature:1551343-1551537:-1:exon
so has part: feature:1550707-1550787:-1:exon
so has part: feature:1549681-1549798:-1:exon
so has part: feature:1548472-1548698:-1:exon
so has part: feature:1548225-1548348:-1:exon
so has part: feature:1547415-1547550:-1:exon
so has part: feature:1547017-1547240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1582069-1582948:-1:exon

position:1582069:-1
position: 1582069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1581742-1581839:-1:exon

position:1581742:-1
position: 1581742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1581839:-1
position: 1581839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1580654-1580723:-1:exon

position:1580654:-1
position: 1580654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1580723:-1
position: 1580723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1578258-1578406:-1:exon

position:1578258:-1
position: 1578258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1578406:-1
position: 1578406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1577047-1577099:-1:exon

position:1577047:-1
position: 1577047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577099:-1
position: 1577099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1575350-1575447:-1:exon

position:1575350:-1
position: 1575350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575447:-1
position: 1575447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1572927-1573062:-1:exon

position:1572927:-1
position: 1572927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1573062:-1
position: 1573062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1572214-1572310:-1:exon

position:1572214:-1
position: 1572214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572310:-1
position: 1572310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1571269-1571358:-1:exon

position:1571269:-1
position: 1571269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571358:-1
position: 1571358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1570146-1570281:-1:exon

position:1570146:-1
position: 1570146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1570281:-1
position: 1570281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1569218-1569317:-1:exon

position:1569218:-1
position: 1569218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569317:-1
position: 1569317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1568249-1568421:-1:exon

position:1568249:-1
position: 1568249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1568421:-1
position: 1568421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1564586-1564683:-1:exon

position:1564586:-1
position: 1564586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1564683:-1
position: 1564683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1563537-1563698:-1:exon

position:1563537:-1
position: 1563537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1563698:-1
position: 1563698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1562460-1562671:-1:exon

position:1562460:-1
position: 1562460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1562671:-1
position: 1562671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1561308-1561527:-1:exon

position:1561308:-1
position: 1561308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1561527:-1
position: 1561527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1560926-1561114:-1:exon

position:1560926:-1
position: 1560926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1561114:-1
position: 1561114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1558229-1558416:-1:exon

position:1558229:-1
position: 1558229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1558416:-1
position: 1558416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1557944-1558015:-1:exon

position:1557944:-1
position: 1557944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1558015:-1
position: 1558015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1556021-1556141:-1:exon

position:1556021:-1
position: 1556021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1556141:-1
position: 1556141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1554061-1554171:-1:exon

position:1554061:-1
position: 1554061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1554171:-1
position: 1554171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1553637-1553786:-1:exon

position:1553637:-1
position: 1553637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1553786:-1
position: 1553786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1553030-1553116:-1:exon

position:1553030:-1
position: 1553030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1553116:-1
position: 1553116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1551343-1551537:-1:exon

position:1551343:-1
position: 1551343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1551537:-1
position: 1551537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1550707-1550787:-1:exon

position:1550707:-1
position: 1550707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1550787:-1
position: 1550787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1549681-1549798:-1:exon

position:1549681:-1
position: 1549681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1549798:-1
position: 1549798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1548472-1548698:-1:exon

position:1548472:-1
position: 1548472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548698:-1
position: 1548698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1548225-1548348:-1:exon

position:1548225:-1
position: 1548225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548348:-1
position: 1548348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1547415-1547550:-1:exon

position:1547415:-1
position: 1547415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1547550:-1
position: 1547550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1547017-1547240:-1:exon

position:1547240:-1
position: 1547240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tarbp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tarbp1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 8 bases in 8 codons; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: probable methyltransferase TARBP1
translation: MESVLAELLLSPDRDPRAVLAPLCGGEASAERVEALRFLLQRLEARGAGALCAEAAREVAAGFLVPLLRGRPGAAGAPGPPGPPEPPGRRARVLRAAGAALRSCARLAGAPPLAAALAEEALRELRAGPGGAEAALELLAAVGPGLRPREDAPLLGRVARAAAALALAGDAGPEGAAAARLLAALGRGGGAALRAVWDALAAPAAPAGPGRLAAELQVLSALAERLLPEPGARPGGPDARRCARFWSAVRAGLGRADDALTRRRARFLLRRAVEVSAAPGADRACACADPAGTGPSLFWWSEKKKDELLKFWETYILIMETLEGNQIHVIKPVLPKLNNLFDYAVSEENGCWLFHPSWHVCIYKRMFESENKALTKEGVTHFLELYETKPLPFSPELFEFIIGPLMDALSESSLYGRSPGQPLGSGSPLGLKLQMFLVTYVSLLPEDVKRSFLLKFLQRMTDRHWCAVPILFLSKALASVPRRRALGTEGLLALRDVMQCTMITHQTLLRGAAQCYLLQTAMHLLDVEQVSLSEVSTFLATLRQEESLGRGTTLWAELCEWLHANEQCFRPSPAGCAEPQETSVNAFVRNLVHEYVKSPGWEAEESCCVPDWSEARLTALMVLLAVDVEGRKTPFSETQRTRNVLRIFLDPLLDVLGKLGTNAYVPLLRADRCLQLLLELLRASPARAPAAQDDEVPALLENFILSTTESVAPFILRRLTVDELRGLADLDRCRLHLRVLTQLASLHTKAGWRRGNPVCRIIPPLRNACVRHLQETGDGQEPTLARQIQRAVSMAALAAVWEAADQQPALRPEALEAGPVDSFLSALPLNRTLEKPRAEARSCARPPGSGGCREELPSSSRGWGRIVAQFIHDQWVCLSFLLKTHQALIPASIGPLRAALDALAVLPAGQVSPVFHCLKMLVPGLLASSEPLCSESFDVAWRVTSSSSTTQLTFWPNLKAFVQFVFDDKVLAAAAKIKGQAYLKIKEIMHSIIEMSALRTGVFNVLIAHCCRTWALAARASRGDPWVATSYCELLLEACLFGPVFRRDQRLIQDVQTFIESLGPDCAANVVMESTRREDCYVRICAVKFLCLLDESDVSQRSFMEELAIRLLDKDELAAKSSARCYENSLQHRLKNRTWQTLLVLLPRLGQDFLSGIVERVLRAGFAPGQASVKYSVQWVIVLLLHRFPQFLPSFWGCLSSGEEKPSASVCTFLSVLSHLDVIIENVPEKKPVLKQALAVAVRWCVSHNFSVRLHALVSLKKVWQLCXSEGVDERAPWTSVLEGGLSQAEAXHAAGNASRNWQRXQEHFFFARFHPLEDYCLESVFHSLPRLAGLAEEEWLPLAKFRSFTDLPDAADARWYGSTCRLRFLSPPGSPVDDTDGWAEGANVQKKIIPWRLGALDAELEVEAQDRAARLGRXVGRLGVVASLLDKPTNLGGLCRTCEVFGAAXLVVGSLQCVHDPQFQHLSVSAEQWLAALEVKPAQLAEYLQQKKAEGYTIVGXEQTAKSSELDQYCFPEKSLLLLGNEREGIPARLLQQLDACVEIPQQGVVRXLNVHVSXALLIWEYTRQWARPAARPALRGAEPHELSAIPKWAGRTE
SIO_010081: Tarbp1
subclass of: SO_0000673
so part of: Tarbp1
location: complement(join(1547017..1547240,1547415..1547550,1548225..1548348,1548472..1548698,1549681..1549798,1550707..1550787,1551343..1551537,1553030..1553116,1553637..1553786,1554061..1554171,1556021..1556141,1557944..1558015,1558229..1558416,1560926..1561114,1561308..1561527,1562460..1562671,1563537..1563698,1564586..1564683,1568249..1568421,1569218..1569317,1570146..1570281,1571269..1571358,1572214..1572310,1572927..1573062,1575350..1575447,1577047..1577099,1578258..1578406,1580654..1580723,1581742..1581839,1582069..1582948))
location: region:1547017-1582948:-1
so has part: feature:1582069-1582948:-1:exon
so has part: feature:1581742-1581839:-1:exon
so has part: feature:1580654-1580723:-1:exon
so has part: feature:1578258-1578406:-1:exon
so has part: feature:1577047-1577099:-1:exon
so has part: feature:1575350-1575447:-1:exon
so has part: feature:1572927-1573062:-1:exon
so has part: feature:1572214-1572310:-1:exon
so has part: feature:1571269-1571358:-1:exon
so has part: feature:1570146-1570281:-1:exon
so has part: feature:1569218-1569317:-1:exon
so has part: feature:1568249-1568421:-1:exon
so has part: feature:1564586-1564683:-1:exon
so has part: feature:1563537-1563698:-1:exon
so has part: feature:1562460-1562671:-1:exon
so has part: feature:1561308-1561527:-1:exon
so has part: feature:1560926-1561114:-1:exon
so has part: feature:1558229-1558416:-1:exon
so has part: feature:1557944-1558015:-1:exon
so has part: feature:1556021-1556141:-1:exon
so has part: feature:1554061-1554171:-1:exon
so has part: feature:1553637-1553786:-1:exon
so has part: feature:1553030-1553116:-1:exon
so has part: feature:1551343-1551537:-1:exon
so has part: feature:1550707-1550787:-1:exon
so has part: feature:1549681-1549798:-1:exon
so has part: feature:1548472-1548698:-1:exon
so has part: feature:1548225-1548348:-1:exon
so has part: feature:1547415-1547550:-1:exon
so has part: feature:1547017-1547240:-1:exon

XP_048223954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1582069-1582948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1581742-1581839:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1580654-1580723:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1578258-1578406:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1577047-1577099:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1575350-1575447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1572927-1573062:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1572214-1572310:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1571269-1571358:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1570146-1570281:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1569218-1569317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1568249-1568421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1564586-1564683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1563537-1563698:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1562460-1562671:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1561308-1561527:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1560926-1561114:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1558229-1558416:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1557944-1558015:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1556021-1556141:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1554061-1554171:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1553637-1553786:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1553030-1553116:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1551343-1551537:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1550707-1550787:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1549681-1549798:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1548472-1548698:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1548225-1548348:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1547415-1547550:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1547017-1547240:-1:exon

Irf2bp2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Irf2bp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1622699..1625159)
location: region:1622699-1625159:-1
so has part: feature:1622699-1625159:-1:exon
subclass of: SO_0000010

125367119
type: Gene
SIO_000068: ncbigene

position:1622699:-1
position: 1622699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1625159:-1
position: 1625159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1622699-1625159:-1:exon

Irf2bp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Irf2bp2
product: interferon regulatory factor 2 binding protein 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367733.1
SIO_010081: Irf2bp2
subclass of: SO_0000673
so part of: Irf2bp2
location: complement(join(1622699..1623842,1624095..1625159))
location: region:1622699-1625159:-1
so has part: feature:1624095-1625159:-1:exon
so has part: feature:1622699-1623842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1624095-1625159:-1:exon

position:1624095:-1
position: 1624095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1622699-1623842:-1:exon

position:1623842:-1
position: 1623842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Irf2bp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Irf2bp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon regulatory factor 2-binding protein 2
translation: MAAAVAVAAAARRQSCYLCDLPRMPWAMLWDFTEPVCRGCVNYEGADRVELVIETARQLKRAHGCGPEARSPPGAAPAKPPPPPPLSAKDLLLQPPPPPPPPLGPAEAPRAPGPDRAPLAGVERAAPPRLAADFGARAPPANGLLVPNGFAKLEEPPPPELNRQSPNPRRAHAAPPTLVPLLNGAAGPLPPAAAASASAAAAAALGLGARAAAAASLAAASLAAAAALGPGPAPPAAAEPPAHKRPASASLTAGGAPAEPEPREGPKEKPPPPPLPLAAADPGAEGAGKGRGPAEPDWAGRPKTVRDTLLALHQHGHAAPFEGKFKKEPALAAGRLLGFEANGASGPKAVARTARKRKPSPEPEGGEAGPPKINGEAQPWLSTSAEGLKIPMTPTSSFVSPPPPTASPHSHRTTPPEAAQNGQSPMAALILVADNAGGSHASKDANPAHSTARRNSSSPPSPSSASQRRLGPREAGGQGSGGPGGLEPAHPTSLPDSSLAASAPLCCTLCHERLEDTHFVQCPSVPSHKFCFPCSRQSIKQQGASGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGDVKVKKERDS
SIO_010081: Irf2bp2
subclass of: SO_0000673
so part of: Irf2bp2
location: complement(join(1623124..1623842,1624095..1625142))
location: region:1623124-1625142:-1
so has part: feature:1624095-1625142:-1:exon
so has part: feature:1623124-1623842:-1:exon

XP_048223690.1
type: Protein
SIO_000068: ncbiprotein

position:1623124:-1
position: 1623124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1625142:-1
position: 1625142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1624095-1625142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1623124-1623842:-1:exon

Tomm20
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tomm20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1717985..1726152)
location: region:1717985-1726152:-1
so has part: feature:1717985-1726152:-1:exon
subclass of: SO_0000010

125367164
type: Gene
SIO_000068: ncbigene

position:1717985:-1
position: 1717985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1726152:-1
position: 1726152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1717985-1726152:-1:exon

Tomm20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tomm20
product: translocase of outer mitochondrial membrane 20
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367792.1
SIO_010081: Tomm20
subclass of: SO_0000673
so part of: Tomm20
location: complement(join(1717985..1718062,1719622..1719764,1720415..1720496,1723081..1723127,1725907..1726152))
location: region:1717985-1726152:-1
so has part: feature:1725907-1726152:-1:exon
so has part: feature:1723081-1723127:-1:exon
so has part: feature:1720415-1720496:-1:exon
so has part: feature:1719622-1719764:-1:exon
so has part: feature:1717985-1718062:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1725907-1726152:-1:exon

position:1725907:-1
position: 1725907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1723081-1723127:-1:exon

position:1723081:-1
position: 1723081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1723127:-1
position: 1723127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1720415-1720496:-1:exon

position:1720415:-1
position: 1720415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1720496:-1
position: 1720496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1719622-1719764:-1:exon

position:1719622:-1
position: 1719622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1719764:-1
position: 1719764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1717985-1718062:-1:exon

position:1718062:-1
position: 1718062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tomm20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tomm20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import receptor subunit TOM20 homolog
translation: MVGRSSAIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKDAEAVQKFFLEEIQLGEELLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLPTISQRIVSAQSLAEDDVE
SIO_010081: Tomm20
subclass of: SO_0000673
so part of: Tomm20
location: complement(join(1718018..1718062,1719622..1719764,1720415..1720496,1723081..1723127,1725907..1726027))
location: region:1718018-1726027:-1
so has part: feature:1725907-1726027:-1:exon
so has part: feature:1723081-1723127:-1:exon
so has part: feature:1720415-1720496:-1:exon
so has part: feature:1719622-1719764:-1:exon
so has part: feature:1718018-1718062:-1:exon

XP_048223749.1
type: Protein
SIO_000068: ncbiprotein

position:1718018:-1
position: 1718018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1726027:-1
position: 1726027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1725907-1726027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1723081-1723127:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1720415-1720496:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1719622-1719764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1718018-1718062:-1:exon

LOC125367376
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367376
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1725596..1725723)
location: region:1725596-1725723:-1
so has part: feature:1725596-1725723:-1:exon
subclass of: SO_0000578

125367376
type: Gene
SIO_000068: ncbigene

position:1725596:-1
position: 1725596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1725723:-1
position: 1725723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1725596-1725723:-1:exon

LOC125367376
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snoRNA
gene: LOC125367376
product: small nucleolar RNA SNORA14
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00397
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007214070.1
SIO_010081: LOC125367376
subclass of: SO_0000673
so part of: LOC125367376
location: complement(1725596..1725723)
location: region:1725596-1725723:-1
so has part: feature:1725596-1725723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1725596-1725723:-1:exon

Rbm34
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Rbm34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1728164..1738601)
location: region:1728164-1738601:-1
so has part: feature:1728164-1738601:-1:exon
subclass of: SO_0000010

125367108
type: Gene
SIO_000068: ncbigene

position:1728164:-1
position: 1728164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1738601:-1
position: 1738601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1728164-1738601:-1:exon

Rbm34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rbm34
product: RNA binding motif protein 34
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367720.1
SIO_010081: Rbm34
subclass of: SO_0000673
so part of: Rbm34
location: complement(join(1728164..1728691,1729607..1729725,1730186..1730225,1731883..1731946,1732048..1732131,1734366..1734409,1734728..1734787,1735936..1736170,1737527..1737657,1738219..1738393,1738485..1738601))
location: region:1728164-1738601:-1
so has part: feature:1738485-1738601:-1:exon
so has part: feature:1738219-1738393:-1:exon
so has part: feature:1737527-1737657:-1:exon
so has part: feature:1735936-1736170:-1:exon
so has part: feature:1734728-1734787:-1:exon
so has part: feature:1734366-1734409:-1:exon
so has part: feature:1732048-1732131:-1:exon
so has part: feature:1731883-1731946:-1:exon
so has part: feature:1730186-1730225:-1:exon
so has part: feature:1729607-1729725:-1:exon
so has part: feature:1728164-1728691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1738485-1738601:-1:exon

position:1738485:-1
position: 1738485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1738219-1738393:-1:exon

position:1738219:-1
position: 1738219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1738393:-1
position: 1738393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1737527-1737657:-1:exon

position:1737527:-1
position: 1737527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1737657:-1
position: 1737657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1735936-1736170:-1:exon

position:1735936:-1
position: 1735936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1736170:-1
position: 1736170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1734728-1734787:-1:exon

position:1734728:-1
position: 1734728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1734787:-1
position: 1734787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1734366-1734409:-1:exon

position:1734366:-1
position: 1734366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1734409:-1
position: 1734409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1732048-1732131:-1:exon

position:1732048:-1
position: 1732048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1732131:-1
position: 1732131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1731883-1731946:-1:exon

position:1731883:-1
position: 1731883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1731946:-1
position: 1731946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1730186-1730225:-1:exon

position:1730186:-1
position: 1730186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1730225:-1
position: 1730225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1729607-1729725:-1:exon

position:1729607:-1
position: 1729607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1729725:-1
position: 1729725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1728164-1728691:-1:exon

position:1728691:-1
position: 1728691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rbm34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rbm34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 34
translation: MAAAGERRRKRKRSPEPGRGPDGAGTAAGDYVVGQVAGSLRRGARPAEEGGGRLAALFSAAAAAVPARPAFVPAPRQPSRGRKGEDGGPPPEWPRAASGQPAKKTKTKKASHADRNLADRESALAIADLEEETHQKQAQKRKTAHCSGKVVDRKVLDDVDQSLDVSQRKKVQVNKEEERLKNERTVFVGNLPIACNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKVHPDQKTLHAYVVFKEESAAAKALERNGAQIADGFRIRVDRASETSSRDKRSVFVGNLPYKVEEPALEEHFVDCGSVVAVRIVRDPVTGVGKGFGYVLFENTDAVHLALKLNNSELMGRKLRVMRSVNKEKLRQQNLKAGLKNVSKPKQGFHFASTHAGQSKSVFVGEKAVLIKKKKKKGQKKSVRIKKAKKQKS
SIO_010081: Rbm34
subclass of: SO_0000673
so part of: Rbm34
location: complement(join(1728404..1728691,1729607..1729725,1730186..1730225,1731883..1731946,1732048..1732131,1734366..1734409,1734728..1734787,1735936..1736170,1737527..1737657,1738219..1738393,1738485..1738537))
location: region:1728404-1738537:-1
so has part: feature:1738485-1738537:-1:exon
so has part: feature:1738219-1738393:-1:exon
so has part: feature:1737527-1737657:-1:exon
so has part: feature:1735936-1736170:-1:exon
so has part: feature:1734728-1734787:-1:exon
so has part: feature:1734366-1734409:-1:exon
so has part: feature:1732048-1732131:-1:exon
so has part: feature:1731883-1731946:-1:exon
so has part: feature:1730186-1730225:-1:exon
so has part: feature:1729607-1729725:-1:exon
so has part: feature:1728404-1728691:-1:exon

XP_048223677.1
type: Protein
SIO_000068: ncbiprotein

position:1728404:-1
position: 1728404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1738537:-1
position: 1738537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1738485-1738537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1738219-1738393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1737527-1737657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1735936-1736170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1734728-1734787:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1734366-1734409:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1732048-1732131:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1731883-1731946:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1730186-1730225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1729607-1729725:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1728404-1728691:-1:exon

Arid4b
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Arid4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1739652..1841981)
location: region:1739652-1841981:-1
so has part: feature:1739652-1841981:-1:exon
subclass of: SO_0000010

125367104
type: Gene
SIO_000068: ncbigene

position:1739652:-1
position: 1739652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1841981:-1
position: 1841981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1739652-1841981:-1:exon

Arid4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arid4b
product: AT-rich interaction domain 4B, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367711.1
SIO_010081: Arid4b
subclass of: SO_0000673
so part of: Arid4b
location: complement(join(1739652..1741412,1744262..1744408,1745319..1745534,1747701..1747814,1751264..1752484,1753691..1753889,1757290..1757374,1770912..1771166,1777163..1777338,1777668..1777908,1779444..1779541,1781012..1781106,1782397..1782469,1785330..1785484,1786756..1786832,1789747..1789826,1790708..1790846,1798394..1798485,1805191..1805270,1808777..1808867,1810950..1811015,1813532..1813642,1840494..1840548,1841949..1841981))
location: region:1739652-1841981:-1
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so has part: feature:1744262-1744408:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1841949-1841981:-1:exon

position:1841949:-1
position: 1841949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1840494-1840548:-1:exon

position:1840494:-1
position: 1840494
reference: sequence
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position:1840548:-1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:1813532-1813642:-1:exon

position:1813532:-1
position: 1813532
reference: sequence
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position:1813642:-1
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urn:…
SIO_000300: 4
SIO_000628: feature:1810950-1811015:-1:exon

position:1810950:-1
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reference: sequence
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position:1811015:-1
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:1808777-1808867:-1:exon

position:1808777:-1
position: 1808777
reference: sequence
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position:1808867:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:1805191-1805270:-1:exon

position:1805191:-1
position: 1805191
reference: sequence
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position:1805270:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1798394-1798485:-1:exon

position:1798394:-1
position: 1798394
reference: sequence
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position:1798485:-1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:1790708-1790846:-1:exon

position:1790708:-1
position: 1790708
reference: sequence
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position:1790846:-1
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urn:…
SIO_000300: 9
SIO_000628: feature:1789747-1789826:-1:exon

position:1789747:-1
position: 1789747
reference: sequence
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position:1789826:-1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:1786756-1786832:-1:exon

position:1786756:-1
position: 1786756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1786832:-1
position: 1786832
reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:1785330-1785484:-1:exon

position:1785330:-1
position: 1785330
reference: sequence
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position:1785484:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:1782397-1782469:-1:exon

position:1782397:-1
position: 1782397
reference: sequence
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position:1782469:-1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:1781012-1781106:-1:exon

position:1781012:-1
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reference: sequence
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position:1781106:-1
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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:1779444-1779541:-1:exon

position:1779444:-1
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reference: sequence
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position:1779541:-1
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:1777668-1777908:-1:exon

position:1777668:-1
position: 1777668
reference: sequence
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position:1777908:-1
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urn:…
SIO_000300: 16
SIO_000628: feature:1777163-1777338:-1:exon

position:1777163:-1
position: 1777163
reference: sequence
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position:1777338:-1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:1770912-1771166:-1:exon

position:1770912:-1
position: 1770912
reference: sequence
type: ReverseStrandPosition
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position:1771166:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:1757290-1757374:-1:exon

position:1757290:-1
position: 1757290
reference: sequence
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position:1757374:-1
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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:1753691-1753889:-1:exon

position:1753691:-1
position: 1753691
reference: sequence
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position:1753889:-1
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urn:…
SIO_000300: 20
SIO_000628: feature:1751264-1752484:-1:exon

position:1751264:-1
position: 1751264
reference: sequence
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position:1752484:-1
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:1747701-1747814:-1:exon

position:1747701:-1
position: 1747701
reference: sequence
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position:1747814:-1
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:1745319-1745534:-1:exon

position:1745319:-1
position: 1745319
reference: sequence
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position:1745534:-1
position: 1745534
reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:1744262-1744408:-1:exon

position:1744262:-1
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reference: sequence
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position:1744408:-1
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urn:…
SIO_000300: 24
SIO_000628: feature:1739652-1741412:-1:exon

position:1741412:-1
position: 1741412
reference: sequence
type: ReverseStrandPosition
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Arid4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arid4b
product: AT-rich interaction domain 4B, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367712.1
SIO_010081: Arid4b
subclass of: SO_0000673
so part of: Arid4b
location: complement(join(1739652..1741412,1744262..1744408,1745319..1745534,1747701..1747814,1751264..1752484,1753691..1753889,1757290..1757374,1770912..1771166,1777163..1777299,1777668..1777908,1779444..1779541,1781012..1781106,1782397..1782469,1785330..1785484,1786756..1786832,1789747..1789826,1790708..1790846,1798394..1798485,1805191..1805270,1808777..1808867,1810950..1811015,1813532..1813642,1840494..1840548,1841301..1841566))
location: region:1739652-1841566:-1
so has part: feature:1841301-1841566:-1:exon
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so has part: feature:1739652-1741412:-1:exon

position:1841566:-1
position: 1841566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1841301-1841566:-1:exon

position:1841301:-1
position: 1841301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1840494-1840548:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1813532-1813642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1810950-1811015:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1808777-1808867:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1805191-1805270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1798394-1798485:-1:exon

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SIO_000300: 8
SIO_000628: feature:1790708-1790846:-1:exon

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SIO_000300: 9
SIO_000628: feature:1789747-1789826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1786756-1786832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1785330-1785484:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1782397-1782469:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1781012-1781106:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1779444-1779541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1777668-1777908:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1777163-1777299:-1:exon

position:1777299:-1
position: 1777299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1770912-1771166:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1757290-1757374:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1753691-1753889:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1751264-1752484:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1747701-1747814:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1745319-1745534:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1744262-1744408:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1739652-1741412:-1:exon

Arid4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arid4b
product: AT-rich interaction domain 4B, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367714.1
SIO_010081: Arid4b
subclass of: SO_0000673
so part of: Arid4b
location: complement(join(1739652..1741412,1744262..1744408,1745319..1745534,1747701..1747814,1751264..1752484,1753691..1753889,1757290..1757374,1777163..1777338,1777668..1777908,1779444..1779541,1781012..1781106,1782397..1782469,1785330..1785484,1786756..1786832,1789747..1789826,1790708..1790846,1798394..1798485,1805191..1805270,1808777..1808867,1810950..1811015,1813532..1813642,1840494..1840548,1841301..1841566))
location: region:1739652-1841566:-1
so has part: feature:1841301-1841566:-1:exon
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so has part: feature:1745319-1745534:-1:exon
so has part: feature:1744262-1744408:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1841301-1841566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1840494-1840548:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1813532-1813642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1810950-1811015:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1808777-1808867:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1805191-1805270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1798394-1798485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1790708-1790846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1789747-1789826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1786756-1786832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1785330-1785484:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1782397-1782469:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1781012-1781106:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1779444-1779541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1777668-1777908:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1777163-1777338:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1757290-1757374:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1753691-1753889:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1751264-1752484:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1747701-1747814:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1745319-1745534:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1744262-1744408:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1739652-1741412:-1:exon

Arid4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arid4b
product: AT-rich interaction domain 4B, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367713.1
SIO_010081: Arid4b
subclass of: SO_0000673
so part of: Arid4b
location: complement(join(1739652..1741412,1744262..1744408,1745319..1745534,1747701..1747814,1751264..1752484,1753691..1753889,1757290..1757374,1771020..1771166,1777163..1777338,1777668..1777908,1779444..1779541,1781012..1781106,1782397..1782469,1785330..1785484,1786756..1786832,1789747..1789826,1790708..1790846,1798394..1798485,1805191..1805270,1808777..1808867,1810950..1811015,1813532..1813642,1840494..1840548,1841301..1841566))
location: region:1739652-1841566:-1
so has part: feature:1841301-1841566:-1:exon
so has part: feature:1840494-1840548:-1:exon
so has part: feature:1813532-1813642:-1:exon
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so has part: feature:1777668-1777908:-1:exon
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so has part: feature:1751264-1752484:-1:exon
so has part: feature:1747701-1747814:-1:exon
so has part: feature:1745319-1745534:-1:exon
so has part: feature:1744262-1744408:-1:exon
so has part: feature:1739652-1741412:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1841301-1841566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1840494-1840548:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1813532-1813642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1810950-1811015:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1808777-1808867:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1805191-1805270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1798394-1798485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1790708-1790846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1789747-1789826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1786756-1786832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1785330-1785484:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1782397-1782469:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1781012-1781106:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1779444-1779541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1777668-1777908:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1777163-1777338:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1771020-1771166:-1:exon

position:1771020:-1
position: 1771020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1757290-1757374:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1753691-1753889:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1751264-1752484:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1747701-1747814:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1745319-1745534:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1744262-1744408:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1739652-1741412:-1:exon

Arid4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arid4b
product: AT-rich interaction domain 4B, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367710.1
SIO_010081: Arid4b
subclass of: SO_0000673
so part of: Arid4b
location: complement(join(1739652..1741412,1744262..1744408,1745319..1745534,1747701..1747814,1751264..1752484,1753691..1753889,1757290..1757374,1770912..1771166,1777163..1777338,1777668..1777908,1779444..1779541,1781012..1781106,1782397..1782469,1785330..1785484,1786756..1786832,1789747..1789826,1790708..1790846,1798394..1798485,1805191..1805270,1808777..1808867,1810950..1811015,1813532..1813642,1840494..1840548,1841301..1841566))
location: region:1739652-1841566:-1
so has part: feature:1841301-1841566:-1:exon
so has part: feature:1840494-1840548:-1:exon
so has part: feature:1813532-1813642:-1:exon
so has part: feature:1810950-1811015:-1:exon
so has part: feature:1808777-1808867:-1:exon
so has part: feature:1805191-1805270:-1:exon
so has part: feature:1798394-1798485:-1:exon
so has part: feature:1790708-1790846:-1:exon
so has part: feature:1789747-1789826:-1:exon
so has part: feature:1786756-1786832:-1:exon
so has part: feature:1785330-1785484:-1:exon
so has part: feature:1782397-1782469:-1:exon
so has part: feature:1781012-1781106:-1:exon
so has part: feature:1779444-1779541:-1:exon
so has part: feature:1777668-1777908:-1:exon
so has part: feature:1777163-1777338:-1:exon
so has part: feature:1770912-1771166:-1:exon
so has part: feature:1757290-1757374:-1:exon
so has part: feature:1753691-1753889:-1:exon
so has part: feature:1751264-1752484:-1:exon
so has part: feature:1747701-1747814:-1:exon
so has part: feature:1745319-1745534:-1:exon
so has part: feature:1744262-1744408:-1:exon
so has part: feature:1739652-1741412:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1841301-1841566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1840494-1840548:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1813532-1813642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1810950-1811015:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1808777-1808867:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1805191-1805270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1798394-1798485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1790708-1790846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1789747-1789826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1786756-1786832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1785330-1785484:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1782397-1782469:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1781012-1781106:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1779444-1779541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1777668-1777908:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1777163-1777338:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1770912-1771166:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1757290-1757374:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1753691-1753889:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1751264-1752484:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1747701-1747814:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1745319-1745534:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1744262-1744408:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1739652-1741412:-1:exon

Arid4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arid4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X2
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGAIVEVKNVDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQTDELLGKVVCVDYMSLDKKKALWFPALVVCPDCSDEIAVKKDNILVRSFKDGKFTSVPRKDVHEITSDSAPKPDAVLKQAFDHALEFHKSRTVPANWKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVNKSCKECENVKEIKVKEEGETEIKEIKTEEERTIMPKEEKLPEDEMERKENIKPSLSDQEKEVSNKKPEENENLQDKDDGTARVDQSLSIKVEAEEEKAKSGDETNKEEDEDDEEAEEEEEEEEEEEEDDDDNNEEEEFECYPPGMKVQVRYGRGKNQKMYEASIKDSDVEGGEVLYLVHYCGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKEKDKDEKYSPKNCKLRRLSKPPFQTNPSPEMVSKLDLADARNSDTAHIKSIEITSILNGLQASESSAEDSEPEDERGAQDTDENGREDAKADHLAHARNELTAKEEQNSSSLLEENKGQSDLVIPKPVSKSPERLRKDRDREGISEDTDFEDDDDITKKRKDVKKDSTDKSSKPQIKRGKRRYCSTEECLKTGSPGKKEERAKSKESLCIENSSNSSSDEEEEEKSKAKMTPTKKYNGLEEKRKSLRASGFYSGFSEVAEKRIKLLNTSDERLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEPAASPPHPAPEEGAAEEPLQTVAEEESCSPSAELEKLPPATIDTKPIEEKTVDVSERKADFPSSGSNSVLNTPPTTPESPSSVTVTEASQQQSSVPVSEPLAPSQEEVRSIKSETDSTIEVDSVVGELQDLQSEGNSSPAGFDASVSSISSNQQEPEHPEKACTGQKRVKDAQGGGNPSKKQKRSHKATVVNNKKKGKGPNSSDSEELSAGESVTTTQPIKSVSTGVKSHSAKSPARTQSPGKCGKNGDKDPDLKDPGNRLPKVYKWSFQMSDLENMTSAERITILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKERESAATSSSSSSPSSSSITAAVMLTLAEPAMPSASQNGVSVECR
SIO_010081: Arid4b
subclass of: SO_0000673
so part of: Arid4b
location: complement(join(1741285..1741412,1744262..1744408,1745319..1745534,1747701..1747814,1751264..1752484,1753691..1753889,1757290..1757374,1770912..1771166,1777163..1777299,1777668..1777908,1779444..1779541,1781012..1781106,1782397..1782469,1785330..1785484,1786756..1786832,1789747..1789826,1790708..1790846,1798394..1798485,1805191..1805270,1808777..1808867,1810950..1811015,1813532..1813642,1840494..1840499))
location: region:1741285-1840499:-1
so has part: feature:1840494-1840499:-1:exon
so has part: feature:1813532-1813642:-1:exon
so has part: feature:1810950-1811015:-1:exon
so has part: feature:1808777-1808867:-1:exon
so has part: feature:1805191-1805270:-1:exon
so has part: feature:1798394-1798485:-1:exon
so has part: feature:1790708-1790846:-1:exon
so has part: feature:1789747-1789826:-1:exon
so has part: feature:1786756-1786832:-1:exon
so has part: feature:1785330-1785484:-1:exon
so has part: feature:1782397-1782469:-1:exon
so has part: feature:1781012-1781106:-1:exon
so has part: feature:1779444-1779541:-1:exon
so has part: feature:1777668-1777908:-1:exon
so has part: feature:1777163-1777299:-1:exon
so has part: feature:1770912-1771166:-1:exon
so has part: feature:1757290-1757374:-1:exon
so has part: feature:1753691-1753889:-1:exon
so has part: feature:1751264-1752484:-1:exon
so has part: feature:1747701-1747814:-1:exon
so has part: feature:1745319-1745534:-1:exon
so has part: feature:1744262-1744408:-1:exon
so has part: feature:1741285-1741412:-1:exon

XP_048223669.1
type: Protein
SIO_000068: ncbiprotein

position:1741285:-1
position: 1741285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1840499:-1
position: 1840499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1840494-1840499:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1813532-1813642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1810950-1811015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1808777-1808867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805191-1805270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798394-1798485:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1790708-1790846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1789747-1789826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1786756-1786832:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1785330-1785484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1782397-1782469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1781012-1781106:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1779444-1779541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1777668-1777908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1777163-1777299:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1770912-1771166:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1757290-1757374:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1753691-1753889:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1751264-1752484:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1747701-1747814:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1745319-1745534:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1744262-1744408:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1741285-1741412:-1:exon

Arid4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arid4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X4
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGAIVEVKNVDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQTDELLGKVVCVDYMSLDKKKALWFPALVVCPDCSDEIAVKKDNILVRSFKDGKFTSVPRKDVHEITSDSAPKPDAVLKQAFDHALEFHKSRTVPANWKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVNKSCKECENVKEIKVKEEGETEIKEIKTEEERTIMPKEEKLPEDEMERKENIKPSLGSKKNLLESIPLQSDQEKEVSNKKPEENENLQDKDDGTARVDQSLSIKVEAEEEKAKSGYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKEKDKDEKYSPKNCKLRRLSKPPFQTNPSPEMVSKLDLADARNSDTAHIKSIEITSILNGLQASESSAEDSEPEDERGAQDTDENGREDAKADHLAHARNELTAKEEQNSSSLLEENKGQSDLVIPKPVSKSPERLRKDRDREGISEDTDFEDDDDITKKRKDVKKDSTDKSSKPQIKRGKRRYCSTEECLKTGSPGKKEERAKSKESLCIENSSNSSSDEEEEEKSKAKMTPTKKYNGLEEKRKSLRASGFYSGFSEVAEKRIKLLNTSDERLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEPAASPPHPAPEEGAAEEPLQTVAEEESCSPSAELEKLPPATIDTKPIEEKTVDVSERKADFPSSGSNSVLNTPPTTPESPSSVTVTEASQQQSSVPVSEPLAPSQEEVRSIKSETDSTIEVDSVVGELQDLQSEGNSSPAGFDASVSSISSNQQEPEHPEKACTGQKRVKDAQGGGNPSKKQKRSHKATVVNNKKKGKGPNSSDSEELSAGESVTTTQPIKSVSTGVKSHSAKSPARTQSPGKCGKNGDKDPDLKDPGNRLPKVYKWSFQMSDLENMTSAERITILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKERESAATSSSSSSPSSSSITAAVMLTLAEPAMPSASQNGVSVECR
SIO_010081: Arid4b
subclass of: SO_0000673
so part of: Arid4b
location: complement(join(1741285..1741412,1744262..1744408,1745319..1745534,1747701..1747814,1751264..1752484,1753691..1753889,1757290..1757374,1777163..1777338,1777668..1777908,1779444..1779541,1781012..1781106,1782397..1782469,1785330..1785484,1786756..1786832,1789747..1789826,1790708..1790846,1798394..1798485,1805191..1805270,1808777..1808867,1810950..1811015,1813532..1813642,1840494..1840499))
location: region:1741285-1840499:-1
so has part: feature:1840494-1840499:-1:exon
so has part: feature:1813532-1813642:-1:exon
so has part: feature:1810950-1811015:-1:exon
so has part: feature:1808777-1808867:-1:exon
so has part: feature:1805191-1805270:-1:exon
so has part: feature:1798394-1798485:-1:exon
so has part: feature:1790708-1790846:-1:exon
so has part: feature:1789747-1789826:-1:exon
so has part: feature:1786756-1786832:-1:exon
so has part: feature:1785330-1785484:-1:exon
so has part: feature:1782397-1782469:-1:exon
so has part: feature:1781012-1781106:-1:exon
so has part: feature:1779444-1779541:-1:exon
so has part: feature:1777668-1777908:-1:exon
so has part: feature:1777163-1777338:-1:exon
so has part: feature:1757290-1757374:-1:exon
so has part: feature:1753691-1753889:-1:exon
so has part: feature:1751264-1752484:-1:exon
so has part: feature:1747701-1747814:-1:exon
so has part: feature:1745319-1745534:-1:exon
so has part: feature:1744262-1744408:-1:exon
so has part: feature:1741285-1741412:-1:exon

XP_048223671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1840494-1840499:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1813532-1813642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1810950-1811015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1808777-1808867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805191-1805270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798394-1798485:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1790708-1790846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1789747-1789826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1786756-1786832:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1785330-1785484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1782397-1782469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1781012-1781106:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1779444-1779541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1777668-1777908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1777163-1777338:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1757290-1757374:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1753691-1753889:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1751264-1752484:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1747701-1747814:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1745319-1745534:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1744262-1744408:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1741285-1741412:-1:exon

Arid4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arid4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X3
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGAIVEVKNVDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQTDELLGKVVCVDYMSLDKKKALWFPALVVCPDCSDEIAVKKDNILVRSFKDGKFTSVPRKDVHEITSDSAPKPDAVLKQAFDHALEFHKSRTVPANWKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVNKSCKECENVKEIKVKEEGETEIKEIKTEEERTIMPKEEKLPEDEMERKENIKPSLGSKKNLLESIPLQSDQEKEVSNKKPEENENLQDKDDGTARVDQSLSIKVEAEEEKAKSGDETNKEEDEDDEEAEEEEEEEEEEEEDDDDNNEEEEFECYPPGMKVQVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKEKDKDEKYSPKNCKLRRLSKPPFQTNPSPEMVSKLDLADARNSDTAHIKSIEITSILNGLQASESSAEDSEPEDERGAQDTDENGREDAKADHLAHARNELTAKEEQNSSSLLEENKGQSDLVIPKPVSKSPERLRKDRDREGISEDTDFEDDDDITKKRKDVKKDSTDKSSKPQIKRGKRRYCSTEECLKTGSPGKKEERAKSKESLCIENSSNSSSDEEEEEKSKAKMTPTKKYNGLEEKRKSLRASGFYSGFSEVAEKRIKLLNTSDERLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEPAASPPHPAPEEGAAEEPLQTVAEEESCSPSAELEKLPPATIDTKPIEEKTVDVSERKADFPSSGSNSVLNTPPTTPESPSSVTVTEASQQQSSVPVSEPLAPSQEEVRSIKSETDSTIEVDSVVGELQDLQSEGNSSPAGFDASVSSISSNQQEPEHPEKACTGQKRVKDAQGGGNPSKKQKRSHKATVVNNKKKGKGPNSSDSEELSAGESVTTTQPIKSVSTGVKSHSAKSPARTQSPGKCGKNGDKDPDLKDPGNRLPKVYKWSFQMSDLENMTSAERITILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKERESAATSSSSSSPSSSSITAAVMLTLAEPAMPSASQNGVSVECR
SIO_010081: Arid4b
subclass of: SO_0000673
so part of: Arid4b
location: complement(join(1741285..1741412,1744262..1744408,1745319..1745534,1747701..1747814,1751264..1752484,1753691..1753889,1757290..1757374,1771020..1771166,1777163..1777338,1777668..1777908,1779444..1779541,1781012..1781106,1782397..1782469,1785330..1785484,1786756..1786832,1789747..1789826,1790708..1790846,1798394..1798485,1805191..1805270,1808777..1808867,1810950..1811015,1813532..1813642,1840494..1840499))
location: region:1741285-1840499:-1
so has part: feature:1840494-1840499:-1:exon
so has part: feature:1813532-1813642:-1:exon
so has part: feature:1810950-1811015:-1:exon
so has part: feature:1808777-1808867:-1:exon
so has part: feature:1805191-1805270:-1:exon
so has part: feature:1798394-1798485:-1:exon
so has part: feature:1790708-1790846:-1:exon
so has part: feature:1789747-1789826:-1:exon
so has part: feature:1786756-1786832:-1:exon
so has part: feature:1785330-1785484:-1:exon
so has part: feature:1782397-1782469:-1:exon
so has part: feature:1781012-1781106:-1:exon
so has part: feature:1779444-1779541:-1:exon
so has part: feature:1777668-1777908:-1:exon
so has part: feature:1777163-1777338:-1:exon
so has part: feature:1771020-1771166:-1:exon
so has part: feature:1757290-1757374:-1:exon
so has part: feature:1753691-1753889:-1:exon
so has part: feature:1751264-1752484:-1:exon
so has part: feature:1747701-1747814:-1:exon
so has part: feature:1745319-1745534:-1:exon
so has part: feature:1744262-1744408:-1:exon
so has part: feature:1741285-1741412:-1:exon

XP_048223670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1840494-1840499:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1813532-1813642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1810950-1811015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1808777-1808867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805191-1805270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798394-1798485:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1790708-1790846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1789747-1789826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1786756-1786832:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1785330-1785484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1782397-1782469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1781012-1781106:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1779444-1779541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1777668-1777908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1777163-1777338:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1771020-1771166:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1757290-1757374:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1753691-1753889:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1751264-1752484:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1747701-1747814:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1745319-1745534:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1744262-1744408:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1741285-1741412:-1:exon

Arid4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arid4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X1
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGAIVEVKNVDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQTDELLGKVVCVDYMSLDKKKALWFPALVVCPDCSDEIAVKKDNILVRSFKDGKFTSVPRKDVHEITSDSAPKPDAVLKQAFDHALEFHKSRTVPANWKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVNKSCKECENVKEIKVKEEGETEIKEIKTEEERTIMPKEEKLPEDEMERKENIKPSLGSKKNLLESIPLQSDQEKEVSNKKPEENENLQDKDDGTARVDQSLSIKVEAEEEKAKSGDETNKEEDEDDEEAEEEEEEEEEEEEDDDDNNEEEEFECYPPGMKVQVRYGRGKNQKMYEASIKDSDVEGGEVLYLVHYCGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKEKDKDEKYSPKNCKLRRLSKPPFQTNPSPEMVSKLDLADARNSDTAHIKSIEITSILNGLQASESSAEDSEPEDERGAQDTDENGREDAKADHLAHARNELTAKEEQNSSSLLEENKGQSDLVIPKPVSKSPERLRKDRDREGISEDTDFEDDDDITKKRKDVKKDSTDKSSKPQIKRGKRRYCSTEECLKTGSPGKKEERAKSKESLCIENSSNSSSDEEEEEKSKAKMTPTKKYNGLEEKRKSLRASGFYSGFSEVAEKRIKLLNTSDERLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEPAASPPHPAPEEGAAEEPLQTVAEEESCSPSAELEKLPPATIDTKPIEEKTVDVSERKADFPSSGSNSVLNTPPTTPESPSSVTVTEASQQQSSVPVSEPLAPSQEEVRSIKSETDSTIEVDSVVGELQDLQSEGNSSPAGFDASVSSISSNQQEPEHPEKACTGQKRVKDAQGGGNPSKKQKRSHKATVVNNKKKGKGPNSSDSEELSAGESVTTTQPIKSVSTGVKSHSAKSPARTQSPGKCGKNGDKDPDLKDPGNRLPKVYKWSFQMSDLENMTSAERITILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKERESAATSSSSSSPSSSSITAAVMLTLAEPAMPSASQNGVSVECR
SIO_010081: Arid4b
subclass of: SO_0000673
so part of: Arid4b
location: complement(join(1741285..1741412,1744262..1744408,1745319..1745534,1747701..1747814,1751264..1752484,1753691..1753889,1757290..1757374,1770912..1771166,1777163..1777338,1777668..1777908,1779444..1779541,1781012..1781106,1782397..1782469,1785330..1785484,1786756..1786832,1789747..1789826,1790708..1790846,1798394..1798485,1805191..1805270,1808777..1808867,1810950..1811015,1813532..1813642,1840494..1840499))
location: region:1741285-1840499:-1
so has part: feature:1840494-1840499:-1:exon
so has part: feature:1813532-1813642:-1:exon
so has part: feature:1810950-1811015:-1:exon
so has part: feature:1808777-1808867:-1:exon
so has part: feature:1805191-1805270:-1:exon
so has part: feature:1798394-1798485:-1:exon
so has part: feature:1790708-1790846:-1:exon
so has part: feature:1789747-1789826:-1:exon
so has part: feature:1786756-1786832:-1:exon
so has part: feature:1785330-1785484:-1:exon
so has part: feature:1782397-1782469:-1:exon
so has part: feature:1781012-1781106:-1:exon
so has part: feature:1779444-1779541:-1:exon
so has part: feature:1777668-1777908:-1:exon
so has part: feature:1777163-1777338:-1:exon
so has part: feature:1770912-1771166:-1:exon
so has part: feature:1757290-1757374:-1:exon
so has part: feature:1753691-1753889:-1:exon
so has part: feature:1751264-1752484:-1:exon
so has part: feature:1747701-1747814:-1:exon
so has part: feature:1745319-1745534:-1:exon
so has part: feature:1744262-1744408:-1:exon
so has part: feature:1741285-1741412:-1:exon

XP_048223667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1840494-1840499:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1813532-1813642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1810950-1811015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1808777-1808867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805191-1805270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798394-1798485:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1790708-1790846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1789747-1789826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1786756-1786832:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1785330-1785484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1782397-1782469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1781012-1781106:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1779444-1779541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1777668-1777908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1777163-1777338:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1770912-1771166:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1757290-1757374:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1753691-1753889:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1751264-1752484:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1747701-1747814:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1745319-1745534:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1744262-1744408:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1741285-1741412:-1:exon

Arid4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arid4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X1
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGAIVEVKNVDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQTDELLGKVVCVDYMSLDKKKALWFPALVVCPDCSDEIAVKKDNILVRSFKDGKFTSVPRKDVHEITSDSAPKPDAVLKQAFDHALEFHKSRTVPANWKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVNKSCKECENVKEIKVKEEGETEIKEIKTEEERTIMPKEEKLPEDEMERKENIKPSLGSKKNLLESIPLQSDQEKEVSNKKPEENENLQDKDDGTARVDQSLSIKVEAEEEKAKSGDETNKEEDEDDEEAEEEEEEEEEEEEDDDDNNEEEEFECYPPGMKVQVRYGRGKNQKMYEASIKDSDVEGGEVLYLVHYCGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKEKDKDEKYSPKNCKLRRLSKPPFQTNPSPEMVSKLDLADARNSDTAHIKSIEITSILNGLQASESSAEDSEPEDERGAQDTDENGREDAKADHLAHARNELTAKEEQNSSSLLEENKGQSDLVIPKPVSKSPERLRKDRDREGISEDTDFEDDDDITKKRKDVKKDSTDKSSKPQIKRGKRRYCSTEECLKTGSPGKKEERAKSKESLCIENSSNSSSDEEEEEKSKAKMTPTKKYNGLEEKRKSLRASGFYSGFSEVAEKRIKLLNTSDERLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEPAASPPHPAPEEGAAEEPLQTVAEEESCSPSAELEKLPPATIDTKPIEEKTVDVSERKADFPSSGSNSVLNTPPTTPESPSSVTVTEASQQQSSVPVSEPLAPSQEEVRSIKSETDSTIEVDSVVGELQDLQSEGNSSPAGFDASVSSISSNQQEPEHPEKACTGQKRVKDAQGGGNPSKKQKRSHKATVVNNKKKGKGPNSSDSEELSAGESVTTTQPIKSVSTGVKSHSAKSPARTQSPGKCGKNGDKDPDLKDPGNRLPKVYKWSFQMSDLENMTSAERITILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKERESAATSSSSSSPSSSSITAAVMLTLAEPAMPSASQNGVSVECR
SIO_010081: Arid4b
subclass of: SO_0000673
so part of: Arid4b
location: complement(join(1741285..1741412,1744262..1744408,1745319..1745534,1747701..1747814,1751264..1752484,1753691..1753889,1757290..1757374,1770912..1771166,1777163..1777338,1777668..1777908,1779444..1779541,1781012..1781106,1782397..1782469,1785330..1785484,1786756..1786832,1789747..1789826,1790708..1790846,1798394..1798485,1805191..1805270,1808777..1808867,1810950..1811015,1813532..1813642,1840494..1840499))
location: region:1741285-1840499:-1
so has part: feature:1840494-1840499:-1:exon
so has part: feature:1813532-1813642:-1:exon
so has part: feature:1810950-1811015:-1:exon
so has part: feature:1808777-1808867:-1:exon
so has part: feature:1805191-1805270:-1:exon
so has part: feature:1798394-1798485:-1:exon
so has part: feature:1790708-1790846:-1:exon
so has part: feature:1789747-1789826:-1:exon
so has part: feature:1786756-1786832:-1:exon
so has part: feature:1785330-1785484:-1:exon
so has part: feature:1782397-1782469:-1:exon
so has part: feature:1781012-1781106:-1:exon
so has part: feature:1779444-1779541:-1:exon
so has part: feature:1777668-1777908:-1:exon
so has part: feature:1777163-1777338:-1:exon
so has part: feature:1770912-1771166:-1:exon
so has part: feature:1757290-1757374:-1:exon
so has part: feature:1753691-1753889:-1:exon
so has part: feature:1751264-1752484:-1:exon
so has part: feature:1747701-1747814:-1:exon
so has part: feature:1745319-1745534:-1:exon
so has part: feature:1744262-1744408:-1:exon
so has part: feature:1741285-1741412:-1:exon

XP_048223668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1840494-1840499:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1813532-1813642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1810950-1811015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1808777-1808867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805191-1805270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798394-1798485:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1790708-1790846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1789747-1789826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1786756-1786832:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1785330-1785484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1782397-1782469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1781012-1781106:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1779444-1779541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1777668-1777908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1777163-1777338:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1770912-1771166:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1757290-1757374:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1753691-1753889:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1751264-1752484:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1747701-1747814:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1745319-1745534:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1744262-1744408:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1741285-1741412:-1:exon

Arid4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arid4b
product: AT-rich interaction domain 4B, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048367715.1
SIO_010081: Arid4b
subclass of: SO_0000673
so part of: Arid4b
location: complement(join(1745429..1745534,1746750..1746871,1747701..1747814,1751264..1752484,1753691..1753889,1757290..1757374,1770912..1771166,1777163..1777338,1777668..1777908,1779444..1779541,1781012..1781106,1782397..1782469,1785330..1785484,1786756..1786832,1789747..1789826,1790708..1790846,1798394..1798485,1805191..1805270,1808777..1808867,1810950..1811015,1813532..1813642,1840494..1840548,1841301..1841566))
location: region:1745429-1841566:-1
so has part: feature:1841301-1841566:-1:exon
so has part: feature:1840494-1840548:-1:exon
so has part: feature:1813532-1813642:-1:exon
so has part: feature:1810950-1811015:-1:exon
so has part: feature:1808777-1808867:-1:exon
so has part: feature:1805191-1805270:-1:exon
so has part: feature:1798394-1798485:-1:exon
so has part: feature:1790708-1790846:-1:exon
so has part: feature:1789747-1789826:-1:exon
so has part: feature:1786756-1786832:-1:exon
so has part: feature:1785330-1785484:-1:exon
so has part: feature:1782397-1782469:-1:exon
so has part: feature:1781012-1781106:-1:exon
so has part: feature:1779444-1779541:-1:exon
so has part: feature:1777668-1777908:-1:exon
so has part: feature:1777163-1777338:-1:exon
so has part: feature:1770912-1771166:-1:exon
so has part: feature:1757290-1757374:-1:exon
so has part: feature:1753691-1753889:-1:exon
so has part: feature:1751264-1752484:-1:exon
so has part: feature:1747701-1747814:-1:exon
so has part: feature:1746750-1746871:-1:exon
so has part: feature:1745429-1745534:-1:exon

position:1745429:-1
position: 1745429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1841301-1841566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1840494-1840548:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1813532-1813642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1810950-1811015:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1808777-1808867:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1805191-1805270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1798394-1798485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1790708-1790846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1789747-1789826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1786756-1786832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1785330-1785484:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1782397-1782469:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1781012-1781106:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1779444-1779541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1777668-1777908:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1777163-1777338:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1770912-1771166:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1757290-1757374:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1753691-1753889:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1751264-1752484:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1747701-1747814:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1746750-1746871:-1:exon

position:1746750:-1
position: 1746750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1746871:-1
position: 1746871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1745429-1745534:-1:exon

Arid4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arid4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X5
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGAIVEVKNVDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQTDELLGKVVCVDYMSLDKKKALWFPALVVCPDCSDEIAVKKDNILVRSFKDGKFTSVPRKDVHEITSDSAPKPDAVLKQAFDHALEFHKSRTVPANWKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVNKSCKECENVKEIKVKEEGETEIKEIKTEEERTIMPKEEKLPEDEMERKENIKPSLGSKKNLLESIPLQSDQEKEVSNKKPEENENLQDKDDGTARVDQSLSIKVEAEEEKAKSGDETNKEEDEDDEEAEEEEEEEEEEEEDDDDNNEEEEFECYPPGMKVQVRYGRGKNQKMYEASIKDSDVEGGEVLYLVHYCGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKEKDKDEKYSPKNCKLRRLSKPPFQTNPSPEMVSKLDLADARNSDTAHIKSIEITSILNGLQASESSAEDSEPEDERGAQDTDENGREDAKADHLAHARNELTAKEEQNSSSLLEENKGQSDLVIPKPVSKSPERLRKDRDREGISEDTDFEDDDDITKKRKDVKKDSTDKSSKPQIKRGKRRYCSTEECLKTGSPGKKEERAKSKESLCIENSSNSSSDEEEEEKSKAKMTPTKKYNGLEEKRKSLRASGFYSGFSEVAEKRIKLLNTSDERLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEPAASPPHPAPEEGAAEEPLQTVAEEESCSPSAELEKLPPATIDTKPIEEKTVDVSERKADFPSSGSNSVLNTPPTTPESPSSVTVTEASQQQSSVPVSEPLAPSQEEVRSIKSETDSTIEVDSVVGELQDLQSEGNSSPAGFDASVSSISSNQQEPEHPEKACTGQKRVKDAQGGGNPSKKQKRSHKATVVNNKKKGKGRDSCHLHCLTFAGSSLGCTSVQKKAVRPAP
SIO_010081: Arid4b
subclass of: SO_0000673
so part of: Arid4b
location: complement(join(1746780..1746871,1747701..1747814,1751264..1752484,1753691..1753889,1757290..1757374,1770912..1771166,1777163..1777338,1777668..1777908,1779444..1779541,1781012..1781106,1782397..1782469,1785330..1785484,1786756..1786832,1789747..1789826,1790708..1790846,1798394..1798485,1805191..1805270,1808777..1808867,1810950..1811015,1813532..1813642,1840494..1840499))
location: region:1746780-1840499:-1
so has part: feature:1840494-1840499:-1:exon
so has part: feature:1813532-1813642:-1:exon
so has part: feature:1810950-1811015:-1:exon
so has part: feature:1808777-1808867:-1:exon
so has part: feature:1805191-1805270:-1:exon
so has part: feature:1798394-1798485:-1:exon
so has part: feature:1790708-1790846:-1:exon
so has part: feature:1789747-1789826:-1:exon
so has part: feature:1786756-1786832:-1:exon
so has part: feature:1785330-1785484:-1:exon
so has part: feature:1782397-1782469:-1:exon
so has part: feature:1781012-1781106:-1:exon
so has part: feature:1779444-1779541:-1:exon
so has part: feature:1777668-1777908:-1:exon
so has part: feature:1777163-1777338:-1:exon
so has part: feature:1770912-1771166:-1:exon
so has part: feature:1757290-1757374:-1:exon
so has part: feature:1753691-1753889:-1:exon
so has part: feature:1751264-1752484:-1:exon
so has part: feature:1747701-1747814:-1:exon
so has part: feature:1746780-1746871:-1:exon

XP_048223672.1
type: Protein
SIO_000068: ncbiprotein

position:1746780:-1
position: 1746780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1840494-1840499:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1813532-1813642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1810950-1811015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1808777-1808867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805191-1805270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798394-1798485:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1790708-1790846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1789747-1789826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1786756-1786832:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1785330-1785484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1782397-1782469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1781012-1781106:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1779444-1779541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1777668-1777908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1777163-1777338:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1770912-1771166:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1757290-1757374:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1753691-1753889:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1751264-1752484:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1747701-1747814:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1746780-1746871:-1:exon

LOC125367110
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367110
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1814376..1832338)
location: region:1814376-1832338:-1
so has part: feature:1814376-1832338:-1:exon
subclass of: SO_0000011

125367110
type: Gene
SIO_000068: ncbigene

position:1814376:-1
position: 1814376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1832338:-1
position: 1832338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1814376-1832338:-1:exon

LOC125367110
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125367110
product: uncharacterized LOC125367110
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007213990.1
SIO_010081: LOC125367110
subclass of: SO_0000673
so part of: LOC125367110
location: complement(join(1814376..1814386,1826856..1826860,1831363..1832338))
location: region:1814376-1832338:-1
so has part: feature:1831363-1832338:-1:exon
so has part: feature:1826856-1826860:-1:exon
so has part: feature:1814376-1814386:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1831363-1832338:-1:exon

position:1831363:-1
position: 1831363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1826856-1826860:-1:exon

position:1826856:-1
position: 1826856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1826860:-1
position: 1826860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1814376-1814386:-1:exon

position:1814386:-1
position: 1814386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ggps1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ggps1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1841913..1849343
location: region:1841913-1849343:1
so has part: feature:1841913-1849343:1:exon
subclass of: SO_0000010

125367109
type: Gene
SIO_000068: ncbigene

position:1841913:1
position: 1841913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1849343:1
position: 1849343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1841913-1849343:1:exon

Ggps1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ggps1
product: geranylgeranyl diphosphate synthase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367721.1
SIO_010081: Ggps1
subclass of: SO_0000673
so part of: Ggps1
location: join(1841913..1842122,1845561..1845653,1847372..1847442,1848284..1849343)
location: region:1841913-1849343:1
so has part: feature:1841913-1842122:1:exon
so has part: feature:1845561-1845653:1:exon
so has part: feature:1847372-1847442:1:exon
so has part: feature:1848284-1849343:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1841913-1842122:1:exon

position:1842122:1
position: 1842122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1845561-1845653:1:exon

position:1845561:1
position: 1845561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1845653:1
position: 1845653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1847372-1847442:1:exon

position:1847372:1
position: 1847372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1847442:1
position: 1847442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1848284-1849343:1:exon

position:1848284:1
position: 1848284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

B3galnt2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: B3galnt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1842127..1892253)
location: region:1842127-1892253:-1
so has part: feature:1842127-1892253:-1:exon
subclass of: SO_0000010

125367106
type: Gene
SIO_000068: ncbigene

position:1842127:-1
position: 1842127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1892253:-1
position: 1892253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1842127-1892253:-1:exon

B3galnt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: B3galnt2
product: beta-1,3-N-acetylgalactosaminyltransferase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048367718.1
SIO_010081: B3galnt2
subclass of: SO_0000673
so part of: B3galnt2
location: complement(join(1842127..1842166,1872351..1872492,1873979..1874035,1874360..1874519,1875021..1875149,1876247..1876430,1877700..1877778,1878683..1878793,1882705..1882800,1883967..1884160,1884391..1884491,1885756..1885903,1892027..1892253))
location: region:1842127-1892253:-1
so has part: feature:1892027-1892253:-1:exon
so has part: feature:1885756-1885903:-1:exon
so has part: feature:1884391-1884491:-1:exon
so has part: feature:1883967-1884160:-1:exon
so has part: feature:1882705-1882800:-1:exon
so has part: feature:1878683-1878793:-1:exon
so has part: feature:1877700-1877778:-1:exon
so has part: feature:1876247-1876430:-1:exon
so has part: feature:1875021-1875149:-1:exon
so has part: feature:1874360-1874519:-1:exon
so has part: feature:1873979-1874035:-1:exon
so has part: feature:1872351-1872492:-1:exon
so has part: feature:1842127-1842166:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1892027-1892253:-1:exon

position:1892027:-1
position: 1892027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1885756-1885903:-1:exon

position:1885756:-1
position: 1885756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1885903:-1
position: 1885903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1884391-1884491:-1:exon

position:1884391:-1
position: 1884391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1884491:-1
position: 1884491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1883967-1884160:-1:exon

position:1883967:-1
position: 1883967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1884160:-1
position: 1884160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1882705-1882800:-1:exon

position:1882705:-1
position: 1882705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1882800:-1
position: 1882800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1878683-1878793:-1:exon

position:1878683:-1
position: 1878683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1878793:-1
position: 1878793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1877700-1877778:-1:exon

position:1877700:-1
position: 1877700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1877778:-1
position: 1877778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1876247-1876430:-1:exon

position:1876247:-1
position: 1876247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1876430:-1
position: 1876430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1875021-1875149:-1:exon

position:1875021:-1
position: 1875021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1875149:-1
position: 1875149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1874360-1874519:-1:exon

position:1874360:-1
position: 1874360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1874519:-1
position: 1874519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1873979-1874035:-1:exon

position:1873979:-1
position: 1873979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1874035:-1
position: 1874035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1872351-1872492:-1:exon

position:1872351:-1
position: 1872351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1872492:-1
position: 1872492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1842127-1842166:-1:exon

position:1842166:-1
position: 1842166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ggps1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ggps1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: geranylgeranyl pyrophosphate synthase
translation: MEKTQETAERILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPEAVKIFTRQLLELHQGQGLDIYWRDTYTCPTEDEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLSSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPDSSQVQNILRQRTENVDIKKYCVHYLEDIGSFEYTRNTLRELESKAYKQIEACGGNPELVALVQYLSKMFREETE
SIO_010081: Ggps1
subclass of: SO_0000673
so part of: Ggps1
location: join(1845584..1845653,1847372..1847442,1848284..1849045)
location: region:1845584-1849045:1
so has part: feature:1845584-1845653:1:exon
so has part: feature:1847372-1847442:1:exon
so has part: feature:1848284-1849045:1:exon

XP_048223678.1
type: Protein
SIO_000068: ncbiprotein

position:1845584:1
position: 1845584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1849045:1
position: 1849045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1845584-1845653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1847372-1847442:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1848284-1849045:1:exon

Tbce
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tbce
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1850382..1871307
location: region:1850382-1871307:1
so has part: feature:1850382-1871307:1:exon
subclass of: SO_0000010

125367105
type: Gene
SIO_000068: ncbigene

position:1850382:1
position: 1850382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871307:1
position: 1871307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1850382-1871307:1:exon

Tbce
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tbce
product: tubulin folding cofactor E
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367716.1
SIO_010081: Tbce
subclass of: SO_0000673
so part of: Tbce
location: join(1850382..1850456,1852472..1852601,1854587..1854671,1859541..1859726,1860811..1860899,1861782..1861881,1863391..1863493,1864509..1864585,1865070..1865165,1865447..1865511,1865589..1865653,1865909..1866061,1866726..1866879,1868023..1868091,1868835..1868894,1870885..1870976,1871118..1871307)
location: region:1850382-1871307:1
so has part: feature:1850382-1850456:1:exon
so has part: feature:1852472-1852601:1:exon
so has part: feature:1854587-1854671:1:exon
so has part: feature:1859541-1859726:1:exon
so has part: feature:1860811-1860899:1:exon
so has part: feature:1861782-1861881:1:exon
so has part: feature:1863391-1863493:1:exon
so has part: feature:1864509-1864585:1:exon
so has part: feature:1865070-1865165:1:exon
so has part: feature:1865447-1865511:1:exon
so has part: feature:1865589-1865653:1:exon
so has part: feature:1865909-1866061:1:exon
so has part: feature:1866726-1866879:1:exon
so has part: feature:1868023-1868091:1:exon
so has part: feature:1868835-1868894:1:exon
so has part: feature:1870885-1870976:1:exon
so has part: feature:1871118-1871307:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1850382-1850456:1:exon

position:1850456:1
position: 1850456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1852472-1852601:1:exon

position:1852472:1
position: 1852472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1852601:1
position: 1852601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1854587-1854671:1:exon

position:1854587:1
position: 1854587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1854671:1
position: 1854671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1859541-1859726:1:exon

position:1859541:1
position: 1859541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1859726:1
position: 1859726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1860811-1860899:1:exon

position:1860811:1
position: 1860811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1860899:1
position: 1860899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1861782-1861881:1:exon

position:1861782:1
position: 1861782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1861881:1
position: 1861881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1863391-1863493:1:exon

position:1863391:1
position: 1863391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863493:1
position: 1863493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1864509-1864585:1:exon

position:1864509:1
position: 1864509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1864585:1
position: 1864585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1865070-1865165:1:exon

position:1865070:1
position: 1865070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1865165:1
position: 1865165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1865447-1865511:1:exon

position:1865447:1
position: 1865447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1865511:1
position: 1865511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1865589-1865653:1:exon

position:1865589:1
position: 1865589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1865653:1
position: 1865653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1865909-1866061:1:exon

position:1865909:1
position: 1865909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1866061:1
position: 1866061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1866726-1866879:1:exon

position:1866726:1
position: 1866726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1866879:1
position: 1866879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1868023-1868091:1:exon

position:1868023:1
position: 1868023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1868091:1
position: 1868091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1868835-1868894:1:exon

position:1868835:1
position: 1868835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1868894:1
position: 1868894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1870885-1870976:1:exon

position:1870885:1
position: 1870885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1870976:1
position: 1870976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1871118-1871307:1:exon

position:1871118:1
position: 1871118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tbce
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tbce
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone E
translation: MMSDTSMSEVIGRRVEVNGERATVRFSGAIPPVAGLWLGVEWDNPERGKHDGSHEGTVYFTCRHPTGGSFIRPNKANFGVDFLTAVKKRYMLEEEPEEDEREQVVRIGSKAVETVGFDSVLRQQRQLSRRRDVSLSKCAVSSAGEKGRIGEACPNIREVDLSQNLLASWADVVRIAEELAHLEVLNLSENKLQFPSDSLSLTGTFSTLKVLVLNQTGITWAEVLRCAREWPVLQELYLASNSICISERPADVLQTVTLLDLSSNPSIDENQLFLIAHLPRLEQLILSNVGLSSLHFPDAGIGGKTSMFPALQYLVLNDNQIAQWSFVNELEKLRRLHTLSCIRNPLTQGGKEAQTTRQFIIARLGQLQTLNKCQILPEERRGAELDYLKAFGQAWKKAGGHQDADKNRPDQEFLAAHPRYQLLCDKYGAPEDGEVSVQQPFMLKNQLLTLKIKYPSQLEQKVLEKQLPDSMTIQKVKGLFSRLLKVPVSEILLSYESLKMPGIEIELPNDLQSLQFHSVENGDCLLVRW
SIO_010081: Tbce
subclass of: SO_0000673
so part of: Tbce
location: join(1852499..1852601,1854587..1854671,1859541..1859726,1860811..1860899,1861782..1861881,1863391..1863493,1864509..1864585,1865070..1865165,1865447..1865511,1865589..1865653,1865909..1866061,1866726..1866879,1868023..1868091,1868835..1868894,1870885..1870976,1871118..1871210)
location: region:1852499-1871210:1
so has part: feature:1852499-1852601:1:exon
so has part: feature:1854587-1854671:1:exon
so has part: feature:1859541-1859726:1:exon
so has part: feature:1860811-1860899:1:exon
so has part: feature:1861782-1861881:1:exon
so has part: feature:1863391-1863493:1:exon
so has part: feature:1864509-1864585:1:exon
so has part: feature:1865070-1865165:1:exon
so has part: feature:1865447-1865511:1:exon
so has part: feature:1865589-1865653:1:exon
so has part: feature:1865909-1866061:1:exon
so has part: feature:1866726-1866879:1:exon
so has part: feature:1868023-1868091:1:exon
so has part: feature:1868835-1868894:1:exon
so has part: feature:1870885-1870976:1:exon
so has part: feature:1871118-1871210:1:exon

XP_048223673.1
type: Protein
SIO_000068: ncbiprotein

position:1852499:1
position: 1852499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871210:1
position: 1871210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1852499-1852601:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1854587-1854671:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1859541-1859726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1860811-1860899:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1861782-1861881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1863391-1863493:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1864509-1864585:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1865070-1865165:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1865447-1865511:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1865589-1865653:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1865909-1866061:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1866726-1866879:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1868023-1868091:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1868835-1868894:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1870885-1870976:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1871118-1871210:1:exon

B3galnt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: B3galnt2
product: beta-1,3-N-acetylgalactosaminyltransferase 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367719.1
SIO_010081: B3galnt2
subclass of: SO_0000673
so part of: B3galnt2
location: complement(join(1871978..1872492,1873979..1874035,1874360..1874519,1875021..1875146,1876247..1876430,1877700..1877778,1878683..1878793,1882705..1882800,1883967..1884160,1884391..1884491,1885756..1885903,1892027..1892253))
location: region:1871978-1892253:-1
so has part: feature:1892027-1892253:-1:exon
so has part: feature:1885756-1885903:-1:exon
so has part: feature:1884391-1884491:-1:exon
so has part: feature:1883967-1884160:-1:exon
so has part: feature:1882705-1882800:-1:exon
so has part: feature:1878683-1878793:-1:exon
so has part: feature:1877700-1877778:-1:exon
so has part: feature:1876247-1876430:-1:exon
so has part: feature:1875021-1875146:-1:exon
so has part: feature:1874360-1874519:-1:exon
so has part: feature:1873979-1874035:-1:exon
so has part: feature:1871978-1872492:-1:exon

position:1871978:-1
position: 1871978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1892027-1892253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1885756-1885903:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1884391-1884491:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1883967-1884160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1882705-1882800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1878683-1878793:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1877700-1877778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1876247-1876430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1875021-1875146:-1:exon

position:1875146:-1
position: 1875146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1874360-1874519:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1873979-1874035:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1871978-1872492:-1:exon

B3galnt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: B3galnt2
product: beta-1,3-N-acetylgalactosaminyltransferase 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367717.1
SIO_010081: B3galnt2
subclass of: SO_0000673
so part of: B3galnt2
location: complement(join(1871978..1872492,1873979..1874035,1874360..1874519,1875021..1875149,1876247..1876430,1877700..1877778,1878683..1878793,1882705..1882800,1883967..1884160,1884391..1884491,1885756..1885903,1892027..1892253))
location: region:1871978-1892253:-1
so has part: feature:1892027-1892253:-1:exon
so has part: feature:1885756-1885903:-1:exon
so has part: feature:1884391-1884491:-1:exon
so has part: feature:1883967-1884160:-1:exon
so has part: feature:1882705-1882800:-1:exon
so has part: feature:1878683-1878793:-1:exon
so has part: feature:1877700-1877778:-1:exon
so has part: feature:1876247-1876430:-1:exon
so has part: feature:1875021-1875149:-1:exon
so has part: feature:1874360-1874519:-1:exon
so has part: feature:1873979-1874035:-1:exon
so has part: feature:1871978-1872492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1892027-1892253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1885756-1885903:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1884391-1884491:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1883967-1884160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1882705-1882800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1878683-1878793:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1877700-1877778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1876247-1876430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1875021-1875149:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1874360-1874519:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1873979-1874035:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1871978-1872492:-1:exon

B3galnt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: B3galnt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2 isoform X2
translation: MRNWLVLLCPCVLGAALHLWLRLRSAPPARASGAGPADQSASLPQWKSSHYDVVVGVLSARHNHELRDVIRNTWLKHLIQHPGLSQRVLVKFIIGARGCEVPVEDREDPYSCRLLNITHPVLNQEIEAFGLSEDTSSGLSEDRVVSVSFRVLYPIVITSLGVFSDAGDEGFQRNITVKLYQAEQEEALFVARFSPPSCGVQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHRVTVNDGGGVLRVLTAAEGALPPEFLEGVEGVAGGFIYTIQEADALLHSLHSRPQRLEEHARSLREEDALLQQESSTYEDIVFVDVVDTYRNVPAKLLNFYRWTVEATSFALLLKTDDDCYIDLEAVFDRIAHKNLEGPNVWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISRDIVEWLARNSGRLKTYQGEDVSMGIWMAAIGPKRHQDGLWLCEKACEPGMLSSPQYSPRELRELWELKELCGDPCRCEARAR
SIO_010081: B3galnt2
subclass of: SO_0000673
so part of: B3galnt2
location: complement(join(1872352..1872492,1873979..1874035,1874360..1874519,1875021..1875146,1876247..1876430,1877700..1877778,1878683..1878793,1882705..1882800,1883967..1884160,1884391..1884491,1885756..1885903,1892027..1892138))
location: region:1872352-1892138:-1
so has part: feature:1892027-1892138:-1:exon
so has part: feature:1885756-1885903:-1:exon
so has part: feature:1884391-1884491:-1:exon
so has part: feature:1883967-1884160:-1:exon
so has part: feature:1882705-1882800:-1:exon
so has part: feature:1878683-1878793:-1:exon
so has part: feature:1877700-1877778:-1:exon
so has part: feature:1876247-1876430:-1:exon
so has part: feature:1875021-1875146:-1:exon
so has part: feature:1874360-1874519:-1:exon
so has part: feature:1873979-1874035:-1:exon
so has part: feature:1872352-1872492:-1:exon

XP_048223676.1
type: Protein
SIO_000068: ncbiprotein

position:1872352:-1
position: 1872352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1892138:-1
position: 1892138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1892027-1892138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1885756-1885903:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1884391-1884491:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1883967-1884160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1882705-1882800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1878683-1878793:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1877700-1877778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1876247-1876430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1875021-1875146:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1874360-1874519:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1873979-1874035:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1872352-1872492:-1:exon

B3galnt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: B3galnt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2 isoform X1
translation: MRNWLVLLCPCVLGAALHLWLRLRSAPPARASGAGPADQSASLPQWKSSHYDVVVGVLSARHNHELRDVIRNTWLKHLIQHPGLSQRVLVKFIIGARGCEVPVEDREDPYSCRLLNITHPVLNQEIEAFGLSEDTSSGLSEDRVVSVSFRVLYPIVITSLGVFSDAGDEGFQRNITVKLYQAEQEEALFVARFSPPSCGVQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHRVTVNDGGGVLRVLTAAEGALPPEFLEGVEGVAGGFIYTIQEADALLHSLHSRPQRLEEHARSLREEDALLQQESSTYEDIVFVDVVDTYRNVPAKLLNFYRCRTVEATSFALLLKTDDDCYIDLEAVFDRIAHKNLEGPNVWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISRDIVEWLARNSGRLKTYQGEDVSMGIWMAAIGPKRHQDGLWLCEKACEPGMLSSPQYSPRELRELWELKELCGDPCRCEARAR
SIO_010081: B3galnt2
subclass of: SO_0000673
so part of: B3galnt2
location: complement(join(1872352..1872492,1873979..1874035,1874360..1874519,1875021..1875149,1876247..1876430,1877700..1877778,1878683..1878793,1882705..1882800,1883967..1884160,1884391..1884491,1885756..1885903,1892027..1892138))
location: region:1872352-1892138:-1
so has part: feature:1892027-1892138:-1:exon
so has part: feature:1885756-1885903:-1:exon
so has part: feature:1884391-1884491:-1:exon
so has part: feature:1883967-1884160:-1:exon
so has part: feature:1882705-1882800:-1:exon
so has part: feature:1878683-1878793:-1:exon
so has part: feature:1877700-1877778:-1:exon
so has part: feature:1876247-1876430:-1:exon
so has part: feature:1875021-1875149:-1:exon
so has part: feature:1874360-1874519:-1:exon
so has part: feature:1873979-1874035:-1:exon
so has part: feature:1872352-1872492:-1:exon

XP_048223674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1892027-1892138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1885756-1885903:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1884391-1884491:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1883967-1884160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1882705-1882800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1878683-1878793:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1877700-1877778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1876247-1876430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1875021-1875149:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1874360-1874519:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1873979-1874035:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1872352-1872492:-1:exon

B3galnt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: B3galnt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2 isoform X1
translation: MRNWLVLLCPCVLGAALHLWLRLRSAPPARASGAGPADQSASLPQWKSSHYDVVVGVLSARHNHELRDVIRNTWLKHLIQHPGLSQRVLVKFIIGARGCEVPVEDREDPYSCRLLNITHPVLNQEIEAFGLSEDTSSGLSEDRVVSVSFRVLYPIVITSLGVFSDAGDEGFQRNITVKLYQAEQEEALFVARFSPPSCGVQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHRVTVNDGGGVLRVLTAAEGALPPEFLEGVEGVAGGFIYTIQEADALLHSLHSRPQRLEEHARSLREEDALLQQESSTYEDIVFVDVVDTYRNVPAKLLNFYRCRTVEATSFALLLKTDDDCYIDLEAVFDRIAHKNLEGPNVWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISRDIVEWLARNSGRLKTYQGEDVSMGIWMAAIGPKRHQDGLWLCEKACEPGMLSSPQYSPRELRELWELKELCGDPCRCEARAR
SIO_010081: B3galnt2
subclass of: SO_0000673
so part of: B3galnt2
location: complement(join(1872352..1872492,1873979..1874035,1874360..1874519,1875021..1875149,1876247..1876430,1877700..1877778,1878683..1878793,1882705..1882800,1883967..1884160,1884391..1884491,1885756..1885903,1892027..1892138))
location: region:1872352-1892138:-1
so has part: feature:1892027-1892138:-1:exon
so has part: feature:1885756-1885903:-1:exon
so has part: feature:1884391-1884491:-1:exon
so has part: feature:1883967-1884160:-1:exon
so has part: feature:1882705-1882800:-1:exon
so has part: feature:1878683-1878793:-1:exon
so has part: feature:1877700-1877778:-1:exon
so has part: feature:1876247-1876430:-1:exon
so has part: feature:1875021-1875149:-1:exon
so has part: feature:1874360-1874519:-1:exon
so has part: feature:1873979-1874035:-1:exon
so has part: feature:1872352-1872492:-1:exon

XP_048223675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1892027-1892138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1885756-1885903:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1884391-1884491:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1883967-1884160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1882705-1882800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1878683-1878793:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1877700-1877778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1876247-1876430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1875021-1875149:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1874360-1874519:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1873979-1874035:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1872352-1872492:-1:exon

LOC125367378
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367378
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1886080..1886213)
location: region:1886080-1886213:-1
so has part: feature:1886080-1886213:-1:exon
subclass of: SO_0000578

125367378
type: Gene
SIO_000068: ncbigene

position:1886080:-1
position: 1886080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1886213:-1
position: 1886213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1886080-1886213:-1:exon

LOC125367378
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snoRNA
gene: LOC125367378
product: small nucleolar RNA SNORA58
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00418
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007214071.1
SIO_010081: LOC125367378
subclass of: SO_0000673
so part of: LOC125367378
location: complement(1886080..1886213)
location: region:1886080-1886213:-1
so has part: feature:1886080-1886213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1886080-1886213:-1:exon

Gng4
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Gng4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1899886..1908994)
location: region:1899886-1908994:-1
so has part: feature:1899886-1908994:-1:exon
subclass of: SO_0000010

125367180
type: Gene
SIO_000068: ncbigene

position:1899886:-1
position: 1899886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1908994:-1
position: 1908994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1899886-1908994:-1:exon

Gng4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Gng4
product: G protein subunit gamma 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048367802.1
SIO_010081: Gng4
subclass of: SO_0000673
so part of: Gng4
location: complement(join(1899886..1900053,1908899..1908994))
location: region:1899886-1908994:-1
so has part: feature:1908899-1908994:-1:exon
so has part: feature:1899886-1900053:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1908899-1908994:-1:exon

position:1908899:-1
position: 1908899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1899886-1900053:-1:exon

position:1900053:-1
position: 1900053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gng4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Gng4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4
translation: MKEGMSNNTTSISQARKAVEQLKMEACMDRVKVSQAAADLLAYCESHLREDPLLTPVPASENPFREKKFFCTIL
SIO_010081: Gng4
subclass of: SO_0000673
so part of: Gng4
location: complement(join(1899925..1900053,1908899..1908994))
location: region:1899925-1908994:-1
so has part: feature:1908899-1908994:-1:exon
so has part: feature:1899925-1900053:-1:exon

XP_048223759.1
type: Protein
SIO_000068: ncbiprotein

position:1899925:-1
position: 1899925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1908899-1908994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1899925-1900053:-1:exon

Lyst
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Lyst
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1919285..2019678)
location: region:1919285-2019678:-1
so has part: feature:1919285-2019678:-1:exon
subclass of: SO_0000010

125367326
type: Gene
SIO_000068: ncbigene

position:1919285:-1
position: 1919285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2019678:-1
position: 2019678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1919285-2019678:-1:exon

Lyst
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Lyst
product: lysosomal trafficking regulator
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367998.1
SIO_010081: Lyst
subclass of: SO_0000673
so part of: Lyst
location: complement(join(1919285..1921120,1922317..1922388,1923248..1923404,1926209..1926306,1926471..1926610,1928136..1928234,1932649..1932785,1934439..1934628,1935788..1936018,1936828..1937045,1938422..1938562,1941214..1941370,1943034..1943100,1947273..1947517,1949544..1949696,1950218..1950273,1950611..1950672,1951449..1951545,1951635..1951780,1955138..1955326,1955605..1955681,1956593..1956769,1959272..1959478,1961244..1961419,1964415..1964606,1969164..1969316,1970635..1970801,1973019..1973249,1974355..1974524,1975729..1975906,1976999..1977626,1979756..1979887,1982083..1982290,1985376..1985699,1990572..1990762,1991073..1991233,1994463..1994636,1995330..1995474,1996381..1996807,1997562..1997671,1999736..1999802,2000250..2000476,2001736..2001892,2004148..2004309,2005072..2006098,2008803..2010870,2012968..2013058,2017044..2017242,2019242..2019678))
location: region:1919285-2019678:-1
so has part: feature:2019242-2019678:-1:exon
so has part: feature:2017044-2017242:-1:exon
so has part: feature:2012968-2013058:-1:exon
so has part: feature:2008803-2010870:-1:exon
so has part: feature:2005072-2006098:-1:exon
so has part: feature:2004148-2004309:-1:exon
so has part: feature:2001736-2001892:-1:exon
so has part: feature:2000250-2000476:-1:exon
so has part: feature:1999736-1999802:-1:exon
so has part: feature:1997562-1997671:-1:exon
so has part: feature:1996381-1996807:-1:exon
so has part: feature:1995330-1995474:-1:exon
so has part: feature:1994463-1994636:-1:exon
so has part: feature:1991073-1991233:-1:exon
so has part: feature:1990572-1990762:-1:exon
so has part: feature:1985376-1985699:-1:exon
so has part: feature:1982083-1982290:-1:exon
so has part: feature:1979756-1979887:-1:exon
so has part: feature:1976999-1977626:-1:exon
so has part: feature:1975729-1975906:-1:exon
so has part: feature:1974355-1974524:-1:exon
so has part: feature:1973019-1973249:-1:exon
so has part: feature:1970635-1970801:-1:exon
so has part: feature:1969164-1969316:-1:exon
so has part: feature:1964415-1964606:-1:exon
so has part: feature:1961244-1961419:-1:exon
so has part: feature:1959272-1959478:-1:exon
so has part: feature:1956593-1956769:-1:exon
so has part: feature:1955605-1955681:-1:exon
so has part: feature:1955138-1955326:-1:exon
so has part: feature:1951635-1951780:-1:exon
so has part: feature:1951449-1951545:-1:exon
so has part: feature:1950611-1950672:-1:exon
so has part: feature:1950218-1950273:-1:exon
so has part: feature:1949544-1949696:-1:exon
so has part: feature:1947273-1947517:-1:exon
so has part: feature:1943034-1943100:-1:exon
so has part: feature:1941214-1941370:-1:exon
so has part: feature:1938422-1938562:-1:exon
so has part: feature:1936828-1937045:-1:exon
so has part: feature:1935788-1936018:-1:exon
so has part: feature:1934439-1934628:-1:exon
so has part: feature:1932649-1932785:-1:exon
so has part: feature:1928136-1928234:-1:exon
so has part: feature:1926471-1926610:-1:exon
so has part: feature:1926209-1926306:-1:exon
so has part: feature:1923248-1923404:-1:exon
so has part: feature:1922317-1922388:-1:exon
so has part: feature:1919285-1921120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2019242-2019678:-1:exon

position:2019242:-1
position: 2019242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2017044-2017242:-1:exon

position:2017044:-1
position: 2017044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2017242:-1
position: 2017242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2012968-2013058:-1:exon

position:2012968:-1
position: 2012968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2013058:-1
position: 2013058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2008803-2010870:-1:exon

position:2008803:-1
position: 2008803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2010870:-1
position: 2010870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2005072-2006098:-1:exon

position:2005072:-1
position: 2005072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2006098:-1
position: 2006098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2004148-2004309:-1:exon

position:2004148:-1
position: 2004148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2004309:-1
position: 2004309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2001736-2001892:-1:exon

position:2001736:-1
position: 2001736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2001892:-1
position: 2001892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2000250-2000476:-1:exon

position:2000250:-1
position: 2000250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2000476:-1
position: 2000476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1999736-1999802:-1:exon

position:1999736:-1
position: 1999736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1999802:-1
position: 1999802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1997562-1997671:-1:exon

position:1997562:-1
position: 1997562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1997671:-1
position: 1997671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1996381-1996807:-1:exon

position:1996381:-1
position: 1996381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1996807:-1
position: 1996807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1995330-1995474:-1:exon

position:1995330:-1
position: 1995330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1995474:-1
position: 1995474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1994463-1994636:-1:exon

position:1994463:-1
position: 1994463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1994636:-1
position: 1994636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1991073-1991233:-1:exon

position:1991073:-1
position: 1991073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1991233:-1
position: 1991233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1990572-1990762:-1:exon

position:1990572:-1
position: 1990572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1990762:-1
position: 1990762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1985376-1985699:-1:exon

position:1985376:-1
position: 1985376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1985699:-1
position: 1985699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1982083-1982290:-1:exon

position:1982083:-1
position: 1982083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1982290:-1
position: 1982290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1979756-1979887:-1:exon

position:1979756:-1
position: 1979756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1979887:-1
position: 1979887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1976999-1977626:-1:exon

position:1976999:-1
position: 1976999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1977626:-1
position: 1977626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1975729-1975906:-1:exon

position:1975729:-1
position: 1975729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1975906:-1
position: 1975906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1974355-1974524:-1:exon

position:1974355:-1
position: 1974355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1974524:-1
position: 1974524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1973019-1973249:-1:exon

position:1973019:-1
position: 1973019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1973249:-1
position: 1973249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1970635-1970801:-1:exon

position:1970635:-1
position: 1970635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1970801:-1
position: 1970801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1969164-1969316:-1:exon

position:1969164:-1
position: 1969164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1969316:-1
position: 1969316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1964415-1964606:-1:exon

position:1964415:-1
position: 1964415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1964606:-1
position: 1964606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1961244-1961419:-1:exon

position:1961244:-1
position: 1961244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1961419:-1
position: 1961419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1959272-1959478:-1:exon

position:1959272:-1
position: 1959272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1959478:-1
position: 1959478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1956593-1956769:-1:exon

position:1956593:-1
position: 1956593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1956769:-1
position: 1956769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1955605-1955681:-1:exon

position:1955605:-1
position: 1955605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1955681:-1
position: 1955681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1955138-1955326:-1:exon

position:1955138:-1
position: 1955138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1955326:-1
position: 1955326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1951635-1951780:-1:exon

position:1951635:-1
position: 1951635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1951780:-1
position: 1951780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1951449-1951545:-1:exon

position:1951449:-1
position: 1951449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1951545:-1
position: 1951545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1950611-1950672:-1:exon

position:1950611:-1
position: 1950611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1950672:-1
position: 1950672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1950218-1950273:-1:exon

position:1950218:-1
position: 1950218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1950273:-1
position: 1950273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1949544-1949696:-1:exon

position:1949544:-1
position: 1949544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1949696:-1
position: 1949696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1947273-1947517:-1:exon

position:1947273:-1
position: 1947273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1947517:-1
position: 1947517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1943034-1943100:-1:exon

position:1943034:-1
position: 1943034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1943100:-1
position: 1943100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1941214-1941370:-1:exon

position:1941214:-1
position: 1941214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1941370:-1
position: 1941370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1938422-1938562:-1:exon

position:1938422:-1
position: 1938422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1938562:-1
position: 1938562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1936828-1937045:-1:exon

position:1936828:-1
position: 1936828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1937045:-1
position: 1937045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1935788-1936018:-1:exon

position:1935788:-1
position: 1935788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1936018:-1
position: 1936018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1934439-1934628:-1:exon

position:1934439:-1
position: 1934439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1934628:-1
position: 1934628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1932649-1932785:-1:exon

position:1932649:-1
position: 1932649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1932785:-1
position: 1932785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1928136-1928234:-1:exon

position:1928136:-1
position: 1928136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1928234:-1
position: 1928234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1926471-1926610:-1:exon

position:1926471:-1
position: 1926471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1926610:-1
position: 1926610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1926209-1926306:-1:exon

position:1926209:-1
position: 1926209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1926306:-1
position: 1926306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1923248-1923404:-1:exon

position:1923248:-1
position: 1923248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1923404:-1
position: 1923404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1922317-1922388:-1:exon

position:1922317:-1
position: 1922317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1922388:-1
position: 1922388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1919285-1921120:-1:exon

position:1921120:-1
position: 1921120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Lyst
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Lyst
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal-trafficking regulator
translation: MSADSNSLAREFLTDVNRLCNAVVQRAEAREEEEEETHMAALGQYLVYGRGFLLLTRLNSIIDQALTCREELLTLLLSLLPLVWKIPVQEQQATDFNLPLSLDIILTKEKHSSAQRSTQGKLYLEGSTPSGQVAAKVNLSRKSRRQRKSTHRYSVRDARKTQLSTSDSEGNSDEKSPAVSKPRRPRVLQHFAVHSPKGRLTAKLHSLVAKEQAPSDTMALENSRDFIPRLESNTDILSEPAALSILSNMNNSPFDLCHVLLSLLEKVCKFDIALNHNSALAASVVPTLTEFLVGFGDCCNLNDYAESQALSVGWTEEPVALVQRMLFRTVLHLMSVDINAAEAVPESLRKHLTELLRAALKIRACLEKPHDPFAPRQKKTLEEVQEGFVFSKFRHRALLLPELLEGVLQILICCLQAAASNPFYFSQAMDLVQEFIQHQGFNLFETVVLQMEWLVARDGVPPGAAEHLKALISSVLKIMSTVKKVKSEQLHHSVCPRKRHRRCEYSHFMHHHRDLSGLLVSAFKNQLSRNPFEETADGAVHYPERCCCLAVCAHQCLRLLQQASLSSTCVQILSGVHSVGICCCMDPKSVIAPLLHAFTLPSLKHVQQQVLNILNKLILDQLGGAEISQKIKKAACNICTVDSDQLEESLQGNARDDALAPGLPSPSYRCQGILPSSGSEDLLWKWDALEAYQKLVFEEDRLHNIHLANHICNLIQKGNVVVQWKLYNYIFNPVLQRGVELAHHCQHLSTTSAQTPRSSPQKQCVPQEVLQIYLKTLPGLLKSRVIRDLFLSCNGVSQIIELNYLDGMRSYSLKAFETLIISLGDQQQDALVPGIDGVDTEQKEPPSFSADPSLPNQRACSEAPQSLRKFYATLKEAFPKKRKTAHQDVHINTINLFLCVAFLCVSKEAESDRESASESDDTSGYDSTASEPLSHMLPCLSLESLVLPCPERLHEAADVWSMCHWIYMLSPVFQKQFHRLGGFRVCYKLIFMLIQKLFHSHEEERGTRQGDMTINENQDLVRASPAESTLKEDLAPLTIKPDPMPSELGSLSGSADSVGTLESQQISCTNVEHISAPEVAPEEAKVFVSREKEASLQSIRLLEALLAICLHSARTSQKMELELSTQNMSVESILCEMRDHLFQSKVTETELAKPLFDALLRVALGSHSADLDHNDPMTEKSRPPGEELSSQPGDFSEEAEDSQCCSSKLLGEEGGYEADSESNPEDGEPGDDGLEVKPEAEGFCASVGLNDLLENLTQGEIVYPEICMLELNLLSASKAKLDVLTHVFESFLTIIRQKEKNVFLLMQQGTVKSLLGGFLSILTQADSDFQGCQRVLVDLLVSLMSSRTCSEDLTLLLRIFLEKSPCTEILLLGVLRVVESDVAMSPSQYLTFPLLHTPSVSNGVSSQKCLGILNNKAMGLLRRARISQGRKEAGREGFPHRLLSSWHVAPIHLPLLGQNCWPHLSEGFSVSLWFNVESVHESESTAERGKRRKKKNKWLVLQDGSLDGTESDRTEGAESVDPGERLIEEGCVHLISLGSKALMIQVWASPHRGTFTFRMCMDSNDDTKAVLLAQAESQENIFLSSKWQHLVLTYLQQPQGKKNIHGKVSIWISGQRKSDVILDFMLPRKTSLSSDSNKTFCMIGHCLSAQEEFLQLAGKWDLGNLLLFNGAKIGSQEAFYLYACGPNHTSVMPCKYGKPAIDYSRYINKEILHCEQVRELFMTKKHVDLGLLIENLSVVYTTYFPAQYTIYEPVIRLKGQAKAQLSQRPFSSKEVQSIALEPPQLKALQPTECQSLQSILHEIGGVGTFVFLFARVSKILVSDLSKEGLLLVSYKGFPGDCFFQEHKEGQLTSMPQEVCRSFVKIIAEVLGSPPDLELLTIIFNFLLAVHPPTNTYVCHNPTNFYFSLHIDGKVFQEKVQSIMYLRHSSSAGRSQASPGFLVISPSGFTASPSEGNNASSIIPRQPAAHMPRSRSLPAFPTSSPREQPQKLTRSLGCGMD…
SIO_010081: Lyst
subclass of: SO_0000673
so part of: Lyst
location: complement(join(1920982..1921120,1922317..1922388,1923248..1923404,1926209..1926306,1926471..1926610,1928136..1928234,1932649..1932785,1934439..1934628,1935788..1936018,1936828..1937045,1938422..1938562,1941214..1941370,1943034..1943100,1947273..1947517,1949544..1949696,1950218..1950273,1950611..1950672,1951449..1951545,1951635..1951780,1955138..1955326,1955605..1955681,1956593..1956769,1959272..1959478,1961244..1961419,1964415..1964606,1969164..1969316,1970635..1970801,1973019..1973249,1974355..1974524,1975729..1975906,1976999..1977626,1979756..1979887,1982083..1982290,1985376..1985699,1990572..1990762,1991073..1991233,1994463..1994636,1995330..1995474,1996381..1996807,1997562..1997671,1999736..1999802,2000250..2000476,2001736..2001892,2004148..2004309,2005072..2006098,2008803..2010870,2012968..2013058,2017044..2017235))
location: region:1920982-2017235:-1
so has part: feature:2017044-2017235:-1:exon
so has part: feature:2012968-2013058:-1:exon
so has part: feature:2008803-2010870:-1:exon
so has part: feature:2005072-2006098:-1:exon
so has part: feature:2004148-2004309:-1:exon
so has part: feature:2001736-2001892:-1:exon
so has part: feature:2000250-2000476:-1:exon
so has part: feature:1999736-1999802:-1:exon
so has part: feature:1997562-1997671:-1:exon
so has part: feature:1996381-1996807:-1:exon
so has part: feature:1995330-1995474:-1:exon
so has part: feature:1994463-1994636:-1:exon
so has part: feature:1991073-1991233:-1:exon
so has part: feature:1990572-1990762:-1:exon
so has part: feature:1985376-1985699:-1:exon
so has part: feature:1982083-1982290:-1:exon
so has part: feature:1979756-1979887:-1:exon
so has part: feature:1976999-1977626:-1:exon
so has part: feature:1975729-1975906:-1:exon
so has part: feature:1974355-1974524:-1:exon
so has part: feature:1973019-1973249:-1:exon
so has part: feature:1970635-1970801:-1:exon
so has part: feature:1969164-1969316:-1:exon
so has part: feature:1964415-1964606:-1:exon
so has part: feature:1961244-1961419:-1:exon
so has part: feature:1959272-1959478:-1:exon
so has part: feature:1956593-1956769:-1:exon
so has part: feature:1955605-1955681:-1:exon
so has part: feature:1955138-1955326:-1:exon
so has part: feature:1951635-1951780:-1:exon
so has part: feature:1951449-1951545:-1:exon
so has part: feature:1950611-1950672:-1:exon
so has part: feature:1950218-1950273:-1:exon
so has part: feature:1949544-1949696:-1:exon
so has part: feature:1947273-1947517:-1:exon
so has part: feature:1943034-1943100:-1:exon
so has part: feature:1941214-1941370:-1:exon
so has part: feature:1938422-1938562:-1:exon
so has part: feature:1936828-1937045:-1:exon
so has part: feature:1935788-1936018:-1:exon
so has part: feature:1934439-1934628:-1:exon
so has part: feature:1932649-1932785:-1:exon
so has part: feature:1928136-1928234:-1:exon
so has part: feature:1926471-1926610:-1:exon
so has part: feature:1926209-1926306:-1:exon
so has part: feature:1923248-1923404:-1:exon
so has part: feature:1922317-1922388:-1:exon
so has part: feature:1920982-1921120:-1:exon

XP_048223955.1
type: Protein
SIO_000068: ncbiprotein

position:1920982:-1
position: 1920982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2017235:-1
position: 2017235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2017044-2017235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2012968-2013058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2008803-2010870:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2005072-2006098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2004148-2004309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2001736-2001892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2000250-2000476:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1999736-1999802:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1997562-1997671:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1996381-1996807:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1995330-1995474:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1994463-1994636:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1991073-1991233:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1990572-1990762:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1985376-1985699:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1982083-1982290:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1979756-1979887:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1976999-1977626:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1975729-1975906:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1974355-1974524:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1973019-1973249:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1970635-1970801:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1969164-1969316:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1964415-1964606:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1961244-1961419:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1959272-1959478:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1956593-1956769:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1955605-1955681:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1955138-1955326:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1951635-1951780:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1951449-1951545:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1950611-1950672:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1950218-1950273:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1949544-1949696:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1947273-1947517:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1943034-1943100:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1941214-1941370:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1938422-1938562:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1936828-1937045:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1935788-1936018:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1934439-1934628:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1932649-1932785:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1928136-1928234:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1926471-1926610:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1926209-1926306:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1923248-1923404:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1922317-1922388:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1920982-1921120:-1:exon

LOC125367270
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367270
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1954390..1954982
location: region:1954390-1954982:1
so has part: feature:1954390-1954982:1:exon
subclass of: SO_0000011

125367270
type: Gene
SIO_000068: ncbigene

position:1954390:1
position: 1954390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1954982:1
position: 1954982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1954390-1954982:1:exon

LOC125367270
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125367270
product: uncharacterized LOC125367270
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007214035.1
SIO_010081: LOC125367270
subclass of: SO_0000673
so part of: LOC125367270
location: join(1954390..1954506,1954729..1954982)
location: region:1954390-1954982:1
so has part: feature:1954390-1954506:1:exon
so has part: feature:1954729-1954982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1954390-1954506:1:exon

position:1954506:1
position: 1954506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1954729-1954982:1:exon

position:1954729:1
position: 1954729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125367242
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125367242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2044342..2046620)
location: region:2044342-2046620:-1
so has part: feature:2044342-2046620:-1:exon
subclass of: SO_0000011

125367242
type: Gene
SIO_000068: ncbigene

position:2044342:-1
position: 2044342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2046620:-1
position: 2046620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2044342-2046620:-1:exon

LOC125367242
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125367242
product: uncharacterized LOC125367242
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007214021.1
SIO_010081: LOC125367242
subclass of: SO_0000673
so part of: LOC125367242
location: complement(join(2044342..2044353,2045789..2045793,2046406..2046620))
location: region:2044342-2046620:-1
so has part: feature:2046406-2046620:-1:exon
so has part: feature:2045789-2045793:-1:exon
so has part: feature:2044342-2044353:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2046406-2046620:-1:exon

position:2046406:-1
position: 2046406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2045789-2045793:-1:exon

position:2045789:-1
position: 2045789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2045793:-1
position: 2045793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2044342-2044353:-1:exon

position:2044353:-1
position: 2044353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Nid1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Nid1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2056472..2093363)
location: region:2056472-2093363:-1
so has part: feature:2056472-2093363:-1:exon
subclass of: SO_0000010

125367098
type: Gene
SIO_000068: ncbigene

position:2056472:-1
position: 2056472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2093363:-1
position: 2093363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2056472-2093363:-1:exon

Nid1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Nid1
product: nidogen 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367700.1
SIO_010081: Nid1
subclass of: SO_0000673
so part of: Nid1
location: complement(join(2056472..2058115,2058541..2058653,2059027..2059150,2059690..2059847,2060825..2060996,2063014..2063140,2064302..2064474,2065031..2065258,2069028..2069150,2070240..2070389,2071918..2072043,2074590..2074733,2075487..2075735,2075924..2076124,2076222..2076473,2079391..2079540,2081715..2082097,2083217..2083443,2084123..2084416,2093092..2093363))
location: region:2056472-2093363:-1
so has part: feature:2093092-2093363:-1:exon
so has part: feature:2084123-2084416:-1:exon
so has part: feature:2083217-2083443:-1:exon
so has part: feature:2081715-2082097:-1:exon
so has part: feature:2079391-2079540:-1:exon
so has part: feature:2076222-2076473:-1:exon
so has part: feature:2075924-2076124:-1:exon
so has part: feature:2075487-2075735:-1:exon
so has part: feature:2074590-2074733:-1:exon
so has part: feature:2071918-2072043:-1:exon
so has part: feature:2070240-2070389:-1:exon
so has part: feature:2069028-2069150:-1:exon
so has part: feature:2065031-2065258:-1:exon
so has part: feature:2064302-2064474:-1:exon
so has part: feature:2063014-2063140:-1:exon
so has part: feature:2060825-2060996:-1:exon
so has part: feature:2059690-2059847:-1:exon
so has part: feature:2059027-2059150:-1:exon
so has part: feature:2058541-2058653:-1:exon
so has part: feature:2056472-2058115:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2093092-2093363:-1:exon

position:2093092:-1
position: 2093092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2084123-2084416:-1:exon

position:2084123:-1
position: 2084123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2084416:-1
position: 2084416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2083217-2083443:-1:exon

position:2083217:-1
position: 2083217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2083443:-1
position: 2083443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2081715-2082097:-1:exon

position:2081715:-1
position: 2081715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2082097:-1
position: 2082097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2079391-2079540:-1:exon

position:2079391:-1
position: 2079391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2079540:-1
position: 2079540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2076222-2076473:-1:exon

position:2076222:-1
position: 2076222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2076473:-1
position: 2076473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2075924-2076124:-1:exon

position:2075924:-1
position: 2075924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2076124:-1
position: 2076124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2075487-2075735:-1:exon

position:2075487:-1
position: 2075487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2075735:-1
position: 2075735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2074590-2074733:-1:exon

position:2074590:-1
position: 2074590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2074733:-1
position: 2074733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2071918-2072043:-1:exon

position:2071918:-1
position: 2071918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2072043:-1
position: 2072043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2070240-2070389:-1:exon

position:2070240:-1
position: 2070240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2070389:-1
position: 2070389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2069028-2069150:-1:exon

position:2069028:-1
position: 2069028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2069150:-1
position: 2069150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2065031-2065258:-1:exon

position:2065031:-1
position: 2065031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2065258:-1
position: 2065258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2064302-2064474:-1:exon

position:2064302:-1
position: 2064302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2064474:-1
position: 2064474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2063014-2063140:-1:exon

position:2063014:-1
position: 2063014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2063140:-1
position: 2063140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2060825-2060996:-1:exon

position:2060825:-1
position: 2060825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2060996:-1
position: 2060996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2059690-2059847:-1:exon

position:2059690:-1
position: 2059690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2059847:-1
position: 2059847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2059027-2059150:-1:exon

position:2059027:-1
position: 2059027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2059150:-1
position: 2059150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2058541-2058653:-1:exon

position:2058541:-1
position: 2058541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2058653:-1
position: 2058653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2056472-2058115:-1:exon

position:2058115:-1
position: 2058115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Nid1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Nid1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nidogen-1
translation: MRRGAARARALRALLLPLLLAGPGGCLGRRGLFPFGPGLGDRELPPGDDVVSPALELREPLRFYDRAGVASVYVTTNGLIALSEPPATESHPGLFPPSFGMVAPFLADLDTSDGRGKVYYREDRSPSTARLAGELVHRGFPQDVFQPTSVVVVTWESVAPYQGPSPTQGDQRNTFQAVLASSSSSSYAIFLYPEEGLQFSTTFSKKEEKQVPAMVAFSKGSVGFFWKTDGPYNVFADDQESIENLAKSSNAGRRGVWVFEIGGAASAGGVLPADSGPGPADEEGEEEEEEEEATATPSLGPEDLSTPPFLSETPWTGGAAAHSDPGLSSPRHEATQRPPRSTATRARTRSFRLPGGTLPQQSVIDVDEVEETGVVFSYSTDARQTCANSRHQCAVQAECTDFDTGFCCRCVAGYTGNGRQCVAEGSPQRVNGKVKGSVFVGNSQVPVVFENTDLHSYVVMNQGRSYTAISTIPDTVGSSLLPLAPIGGVIGWMFAVEQDGFKNGFSITGGEFTRQAEVTFVGHPGKLVIKQQFSGLNEHGHLTISTELEGRVPRIPPGSTVHIEPYTELYHYSSSVITSSSTREYTVMAPGQDGAEPSRTHAYQWRQTITFQECPHGRESRPALPRTQQLSVDSVFVLYNQDEQILRYALSNSVGPVRDGSPDALQNPCYIGTHGCDANAACRPGPGTQYACECSVGFRGDGKTCSDVDECAEQPSVCGSHQVCNNHPGTFRCECVEGYSFSDAGTCVALVDQRPVNYCESGLHDCDIPQRAQCVYTGGSSYTCACLPGFSGDGRACQDVDECQPGRCHPEAVCYNLPGSFACRCKPGYQGDGFRCQPGEGEQARCRQERERLLGAAEDADAQRPRLPGVFVPECDEHGRYAPTQCHGSTGYCWCVDREGRELEGTRTRPGMRPPCLSTVPPPIHQRPALPTAVIPLPPGTHLLFAQAGKIERLPLEGGSMRKEEAKALLHLPEKVIIGLAFDCVDRMVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGLAVDHLGRNLFWTDSYLDRIEVSKLDGTQRRVLFETHLVNPRGIVADPVRGNLYWTDWDRDHPKIETSYMDGTHRRILVQDNLSLPNGLTFDPFSSQLCWVDAGTHRAECLLPGLPGRRRALEGLQYPFAVSSHGQRLYYTDWKTNSVIAIDLAASKETDAFHPHKQTRPYGIAMALPQCPQGHNYCSVNNGGCTHLCLATPGSRTCSCPDNTVGVDCLERT
SIO_010081: Nid1
subclass of: SO_0000673
so part of: Nid1
location: complement(join(2057994..2058115,2058541..2058653,2059027..2059150,2059690..2059847,2060825..2060996,2063014..2063140,2064302..2064474,2065031..2065258,2069028..2069150,2070240..2070389,2071918..2072043,2074590..2074733,2075487..2075735,2075924..2076124,2076222..2076473,2079391..2079540,2081715..2082097,2083217..2083443,2084123..2084416,2093092..2093310))
location: region:2057994-2093310:-1
so has part: feature:2093092-2093310:-1:exon
so has part: feature:2084123-2084416:-1:exon
so has part: feature:2083217-2083443:-1:exon
so has part: feature:2081715-2082097:-1:exon
so has part: feature:2079391-2079540:-1:exon
so has part: feature:2076222-2076473:-1:exon
so has part: feature:2075924-2076124:-1:exon
so has part: feature:2075487-2075735:-1:exon
so has part: feature:2074590-2074733:-1:exon
so has part: feature:2071918-2072043:-1:exon
so has part: feature:2070240-2070389:-1:exon
so has part: feature:2069028-2069150:-1:exon
so has part: feature:2065031-2065258:-1:exon
so has part: feature:2064302-2064474:-1:exon
so has part: feature:2063014-2063140:-1:exon
so has part: feature:2060825-2060996:-1:exon
so has part: feature:2059690-2059847:-1:exon
so has part: feature:2059027-2059150:-1:exon
so has part: feature:2058541-2058653:-1:exon
so has part: feature:2057994-2058115:-1:exon

XP_048223657.1
type: Protein
SIO_000068: ncbiprotein

position:2057994:-1
position: 2057994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2093310:-1
position: 2093310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2093092-2093310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2084123-2084416:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2083217-2083443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2081715-2082097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2079391-2079540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2076222-2076473:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2075924-2076124:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2075487-2075735:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2074590-2074733:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2071918-2072043:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2070240-2070389:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2069028-2069150:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2065031-2065258:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2064302-2064474:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2063014-2063140:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2060825-2060996:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2059690-2059847:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2059027-2059150:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2058541-2058653:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2057994-2058115:-1:exon

Gpr137b
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Gpr137b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2101664..2109475
location: region:2101664-2109475:1
so has part: feature:2101664-2109475:1:exon
subclass of: SO_0000010

125367327
type: Gene
SIO_000068: ncbigene

position:2101664:1
position: 2101664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2109475:1
position: 2109475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2101664-2109475:1:exon

Gpr137b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Gpr137b
product: G protein-coupled receptor 137B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048367999.1
SIO_010081: Gpr137b
subclass of: SO_0000673
so part of: Gpr137b
location: join(2101664..2101960,2104376..2104450,2104913..2105025,2105553..2105775,2106235..2106384,2107078..2107206,2107848..2107972,2108701..2109475)
location: region:2101664-2109475:1
so has part: feature:2101664-2101960:1:exon
so has part: feature:2104376-2104450:1:exon
so has part: feature:2104913-2105025:1:exon
so has part: feature:2105553-2105775:1:exon
so has part: feature:2106235-2106384:1:exon
so has part: feature:2107078-2107206:1:exon
so has part: feature:2107848-2107972:1:exon
so has part: feature:2108701-2109475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2101664-2101960:1:exon

position:2101960:1
position: 2101960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2104376-2104450:1:exon

position:2104376:1
position: 2104376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2104450:1
position: 2104450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2104913-2105025:1:exon

position:2104913:1
position: 2104913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2105025:1
position: 2105025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2105553-2105775:1:exon

position:2105553:1
position: 2105553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2105775:1
position: 2105775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2106235-2106384:1:exon

position:2106235:1
position: 2106235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2106384:1
position: 2106384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2107078-2107206:1:exon

position:2107078:1
position: 2107078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2107206:1
position: 2107206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2107848-2107972:1:exon

position:2107848:1
position: 2107848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2107972:1
position: 2107972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2108701-2109475:1:exon

position:2108701:1
position: 2108701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gpr137b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Gpr137b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integral membrane protein GPR137B
translation: MTCVRNRHVRVFADSVWPSSAKHCQLRTDSQWVTLDQDVCPAHSPTGGPSTAGAQARREQSEARRGCWGVRGVRTQGQSVGGCPVKRLTPVILAVWATEDADTRNKCAYLGVDEERDPFLITVRGGGGCGGRRPGRARHARLWLQVIFKAKSKYSPELLKYRLPLYLASLFVSLLFLLVNLTCALLARTGRWERKAIVSVRVAINDMLFVLCAVSLSVCLYKISKMSLANIYLESKGSSVCQVTAIGATVILLYTSRACYNLVILSFSHIKNAQSFDYDWYNVSDQADLKNQLGDAGYVVFGVVLFVWELLPTTLVVYFFRVRNPPKDLASAGMVPSHGFSPRSYFFDNPRRYDSDDDLAWSIAPQGLQGSLAPDGCDWGPQAHSFLAAAGPWCGSRPGWPQLAAADSGSEHSCGGEAAEGGRDG
SIO_010081: Gpr137b
subclass of: SO_0000673
so part of: Gpr137b
location: join(2101664..2101960,2104376..2104450,2104913..2105025,2105553..2105775,2106235..2106384,2107078..2107206,2107848..2107972,2108701..2108866)
location: region:2101664-2108866:1
so has part: feature:2101664-2101960:1:exon
so has part: feature:2104376-2104450:1:exon
so has part: feature:2104913-2105025:1:exon
so has part: feature:2105553-2105775:1:exon
so has part: feature:2106235-2106384:1:exon
so has part: feature:2107078-2107206:1:exon
so has part: feature:2107848-2107972:1:exon
so has part: feature:2108701-2108866:1:exon

XP_048223956.1
type: Protein
SIO_000068: ncbiprotein

position:2108866:1
position: 2108866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2101664-2101960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2104376-2104450:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2104913-2105025:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2105553-2105775:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2106235-2106384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2107078-2107206:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2107848-2107972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2108701-2108866:1:exon

Ero1b
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ero1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2113899..2145876)
location: region:2113899-2145876:-1
so has part: feature:2113899-2145876:-1:exon
subclass of: SO_0000010

125366825
type: Gene
SIO_000068: ncbigene

position:2113899:-1
position: 2113899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2145876:-1
position: 2145876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2113899-2145876:-1:exon

Ero1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ero1b
product: endoplasmic reticulum oxidoreductase 1 beta
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048367546.1
SIO_010081: Ero1b
subclass of: SO_0000673
so part of: Ero1b
location: complement(join(2113899..2114235,2115653..2115786,2117624..2117710,2118530..2118599,2119735..2119981,2120293..2120385,2120941..2120967,2122989..2123000,2124671..2124717,2124812..2124932,2126493..2126566,2128878..2128960,2130884..2130925,2132186..2132269,2138514..2138633,2145767..2145876))
location: region:2113899-2145876:-1
so has part: feature:2145767-2145876:-1:exon
so has part: feature:2138514-2138633:-1:exon
so has part: feature:2132186-2132269:-1:exon
so has part: feature:2130884-2130925:-1:exon
so has part: feature:2128878-2128960:-1:exon
so has part: feature:2126493-2126566:-1:exon
so has part: feature:2124812-2124932:-1:exon
so has part: feature:2124671-2124717:-1:exon
so has part: feature:2122989-2123000:-1:exon
so has part: feature:2120941-2120967:-1:exon
so has part: feature:2120293-2120385:-1:exon
so has part: feature:2119735-2119981:-1:exon
so has part: feature:2118530-2118599:-1:exon
so has part: feature:2117624-2117710:-1:exon
so has part: feature:2115653-2115786:-1:exon
so has part: feature:2113899-2114235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2145767-2145876:-1:exon

position:2145767:-1
position: 2145767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2138514-2138633:-1:exon

position:2138514:-1
position: 2138514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2138633:-1
position: 2138633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2132186-2132269:-1:exon

position:2132186:-1
position: 2132186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2132269:-1
position: 2132269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2130884-2130925:-1:exon

position:2130884:-1
position: 2130884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2130925:-1
position: 2130925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2128878-2128960:-1:exon

position:2128878:-1
position: 2128878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2128960:-1
position: 2128960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2126493-2126566:-1:exon

position:2126493:-1
position: 2126493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2126566:-1
position: 2126566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2124812-2124932:-1:exon

position:2124812:-1
position: 2124812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2124932:-1
position: 2124932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2124671-2124717:-1:exon

position:2124671:-1
position: 2124671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2124717:-1
position: 2124717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2122989-2123000:-1:exon

position:2122989:-1
position: 2122989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2123000:-1
position: 2123000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2120941-2120967:-1:exon

position:2120941:-1
position: 2120941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2120967:-1
position: 2120967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2120293-2120385:-1:exon

position:2120293:-1
position: 2120293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2120385:-1
position: 2120385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2119735-2119981:-1:exon

position:2119735:-1
position: 2119735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2119981:-1
position: 2119981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2118530-2118599:-1:exon

position:2118530:-1
position: 2118530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2118599:-1
position: 2118599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2117624-2117710:-1:exon

position:2117624:-1
position: 2117624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2117710:-1
position: 2117710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2115653-2115786:-1:exon

position:2115653:-1
position: 2115653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2115786:-1
position: 2115786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2113899-2114235:-1:exon

position:2114235:-1
position: 2114235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ero1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ero1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ERO1-like protein beta
translation: MGGGRPRAGAGRGAAAAAAQLLLALSCLPSVVEAQVAGVLDDCLCDIDSIDNFNTYKIFPKIKKLQERDYFRYYKVNLKRPCPFWAEDGHCSIKDCHVEPCPESKIPVGIKAGHANKYLKVVNNTKELQDCEQATKLGAVNSTLSNQSKEAFIDWARHDDSQDHFCELDDERSPAAQYVDLLLNPERYTGYKGPSAWRVWNSIYEENCFKPRSVYRPLNPLAPSRGEDDGESFYTWLEGLCLEKRVFYKLISGLHASINLHLCANYLLEETWGKPSWGPNIKEFRRRFDPVETKGEGPRRLKNLYFLYLIELRALSKVAPYFERAIVDLYTGNTEEDADTKTLLLSVFQDTRSFPMHFDEKSMFAGDKKGAKSLKEELRLHFKNISRIMDCVGCDKCRLWGKLQTQGLGTALKILFSEKEIQKLPENSPSKGFQLTRQEIVALLNAFGRLSTSIRELQNFKVLLQHSR
SIO_010081: Ero1b
subclass of: SO_0000673
so part of: Ero1b
location: complement(join(2114175..2114235,2115653..2115786,2117624..2117710,2118530..2118599,2119735..2119981,2120293..2120385,2120941..2120967,2122989..2123000,2124671..2124717,2124812..2124932,2126493..2126566,2128878..2128960,2130884..2130925,2132186..2132269,2138514..2138633,2145767..2145871))
location: region:2114175-2145871:-1
so has part: feature:2145767-2145871:-1:exon
so has part: feature:2138514-2138633:-1:exon
so has part: feature:2132186-2132269:-1:exon
so has part: feature:2130884-2130925:-1:exon
so has part: feature:2128878-2128960:-1:exon
so has part: feature:2126493-2126566:-1:exon
so has part: feature:2124812-2124932:-1:exon
so has part: feature:2124671-2124717:-1:exon
so has part: feature:2122989-2123000:-1:exon
so has part: feature:2120941-2120967:-1:exon
so has part: feature:2120293-2120385:-1:exon
so has part: feature:2119735-2119981:-1:exon
so has part: feature:2118530-2118599:-1:exon
so has part: feature:2117624-2117710:-1:exon
so has part: feature:2115653-2115786:-1:exon
so has part: feature:2114175-2114235:-1:exon

XP_048223503.1
type: Protein
SIO_000068: ncbiprotein

position:2114175:-1
position: 2114175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2145871:-1
position: 2145871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2145767-2145871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2138514-2138633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2132186-2132269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2130884-2130925:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2128878-2128960:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2126493-2126566:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2124812-2124932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2124671-2124717:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2122989-2123000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2120941-2120967:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2120293-2120385:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2119735-2119981:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2118530-2118599:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2117624-2117710:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2115653-2115786:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2114175-2114235:-1:exon

Edaradd
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Edaradd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2160880..2177990
location: region:2160880-2177990:1
so has part: feature:2160880-2177990:1:exon
subclass of: SO_0000010

125367329
type: Gene
SIO_000068: ncbigene

position:2160880:1
position: 2160880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2177990:1
position: 2177990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2160880-2177990:1:exon

Edaradd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Edaradd
product: EDAR associated death domain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048368000.1
SIO_010081: Edaradd
subclass of: SO_0000673
so part of: Edaradd
location: join(2160880..2160975,2165349..2165407,2167777..2167816,2169037..2169095,2174903..2174948,2177608..2177990)
location: region:2160880-2177990:1
so has part: feature:2160880-2160975:1:exon
so has part: feature:2165349-2165407:1:exon
so has part: feature:2167777-2167816:1:exon
so has part: feature:2169037-2169095:1:exon
so has part: feature:2174903-2174948:1:exon
so has part: feature:2177608-2177990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2160880-2160975:1:exon

position:2160975:1
position: 2160975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2165349-2165407:1:exon

position:2165349:1
position: 2165349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2165407:1
position: 2165407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2167777-2167816:1:exon

position:2167777:1
position: 2167777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2167816:1
position: 2167816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2169037-2169095:1:exon

position:2169037:1
position: 2169037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2169095:1
position: 2169095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2174903-2174948:1:exon

position:2174903:1
position: 2174903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2174948:1
position: 2174948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2177608-2177990:1:exon

position:2177608:1
position: 2177608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Edaradd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Edaradd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectodysplasin-A receptor-associated adapter protein
translation: MASPADPLRADQMAKEPVEDTDPSTLSFNTSDKYPIQDTGLPKAEECDTITSNCPPSSDDPHQGEENGFADSTAEALSGDSQDPPCPEDCSCSSCSLRAPTISDLLDDQDLLDVIRIKLDPCHPAVKNWRNFASRWGMSYDELCFLEQRPQSPTLGFLFRHSQRTVAQLLELCQLYHRADVEKVLRRWVAEEWPRRGRADRPARV
SIO_010081: Edaradd
subclass of: SO_0000673
so part of: Edaradd
location: join(2160945..2160975,2165349..2165407,2167777..2167816,2169037..2169095,2174903..2174948,2177608..2177990)
location: region:2160945-2177990:1
so has part: feature:2160945-2160975:1:exon
so has part: feature:2165349-2165407:1:exon
so has part: feature:2167777-2167816:1:exon
so has part: feature:2169037-2169095:1:exon
so has part: feature:2174903-2174948:1:exon
so has part: feature:2177608-2177990:1:exon

XP_048223957.1
type: Protein
SIO_000068: ncbiprotein

position:2160945:1
position: 2160945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2160945-2160975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2165349-2165407:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2167777-2167816:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2169037-2169095:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2174903-2174948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2177608-2177990:1:exon

Lgals8
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Lgals8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2182354..2195063
location: region:2182354-2195063:1
so has part: feature:2182354-2195063:1:exon
subclass of: SO_0000010

125366793
type: Gene
SIO_000068: ncbigene

position:2182354:1
position: 2182354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2195063:1
position: 2195063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2182354-2195063:1:exon

Lgals8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Lgals8
product: galectin 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048367519.1
SIO_010081: Lgals8
subclass of: SO_0000673
so part of: Lgals8
location: join(2182354..2182396,2185091..2185243,2189430..2189518,2190538..2190748,2191368..2191487,2191904..2191960,2192595..2192621,2192736..2192858,2193113..2193201,2193430..2193595,2193985..2195063)
location: region:2182354-2195063:1
so has part: feature:2182354-2182396:1:exon
so has part: feature:2185091-2185243:1:exon
so has part: feature:2189430-2189518:1:exon
so has part: feature:2190538-2190748:1:exon
so has part: feature:2191368-2191487:1:exon
so has part: feature:2191904-2191960:1:exon
so has part: feature:2192595-2192621:1:exon
so has part: feature:2192736-2192858:1:exon
so has part: feature:2193113-2193201:1:exon
so has part: feature:2193430-2193595:1:exon
so has part: feature:2193985-2195063:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2182354-2182396:1:exon

position:2182396:1
position: 2182396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2185091-2185243:1:exon

position:2185091:1
position: 2185091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2185243:1
position: 2185243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2189430-2189518:1:exon

position:2189430:1
position: 2189430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2189518:1
position: 2189518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition