Perognathus longimembris pacificus isolate PPM17 chromosome 15, ASM2315922v1, whole genome shotgun sequence.
type: Entry
definition: Perognathus longimembris pacificus isolate PPM17 chromosome 15, ASM2315922v1, whole genome shotgun sequence.
sequence version: NC_063175.1
sequence date: 2022-05-19
sequence: sequence
division: CON
label: NC_063175.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA837248
dblink: SAMN26876106
keyword: WGS
keyword: RefSeq
source: Perognathus longimembris pacificus (Pacific pocket mouse)
organism: Perognathus longimembris pacificus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Perognathinae; Perognathus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM041278.1.\nAssembly name: ASM2315922v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the San Diego Zoo Wildlife\nAlliance on 2022/04/27. The original whole-genome shotgun project\nhas the accession JALGBO000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: San Diego Zoo Wildlife Alliance\nAssembly Date :: 2021\nAssembly Method :: Peregrine v. JUNE-2020; HiRise v.\n JULY-2020; Juicer v. DECEMBER-2020;\n Juicebox Assembly Tools v. DECEMBER-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 23.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Perognathus longimembris pacificus\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 59853411
topology: linear
so has quality: SO_0000987
location: 1..59853411
location: region:1-59853411:1
RO_0002162: 214514

NC_063175
type: RefSeq
SIO_000068: refseq

PRJNA837248
type: BioProject
SIO_000068: bioproject

SAMN26876106
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59853411:1
position: 59853411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-59853411:1:source
so part of: sequence
organism: Perognathus longimembris pacificus
mol type: genomic DNA
isolate: PPM17
sub species: pacificus
chromosome: 15
sex: male
cell line: 21356
cell type: fibroblast
tissue type: trachea
dev stage: adult
country: USA: Santa Margarita
collection date: 2019
collected by: SDZWA

214514
type: Taxonomy
SIO_000068: taxonomy

LOC125363977
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125363977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 544867..548533
location: region:544867-548533:1
so has part: feature:544867-548533:1:exon
subclass of: SO_0000010

125363977
type: Gene
SIO_000068: ncbigene

position:544867:1
position: 544867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548533:1
position: 548533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544867-548533:1:exon

LOC125363977
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125363977
product: teashirt homolog 3-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048363328.1
SIO_010081: LOC125363977
subclass of: SO_0000673
so part of: LOC125363977
location: 544867..548533
location: region:544867-548533:1
so has part: feature:544867-548533:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544867-548533:1:exon

LOC125363977
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125363977
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:545572..545574,aa:OTHER)
product: LOW QUALITY PROTEIN: teashirt homolog 3-like
translation: MPRRKRQAPRCSAAYVSNELKAAALVDEDVDREDHTADGEPSPKYMCLEKKLSQTCPSYKNSPAAEFSSHEMDSESHIREASDQMEDCENSSIKIEEETKDVSVPLEDTTTLLDSLEQMKAVYNNFLSNSYWSNLNLNLHQPSSEKNTGENSSSSFDWHQSATAKTLQQVSQSRMLPEPSLFSTVQLYRQSSKLYGSIFTGASKFRCKDCSAAYNTLMELTVHMNETGHYRDDNHXTDSNNPKRWSKPHKCSLLEMGGKEDAQKVLKCMYCGHSFESLQDLSVHMTKTKHYQNVPLKEPVTPVATKIIPTMRKKASLELKLPSSPDSTGGTPKATISDTTDTLQKNANPYIMPNNRYSHQNGASYTWDFEARKSHILKCMECGSSHDTLQELTAHMMVIGHFIKVTNSAMKKGKPIMEMPVTPTVTTLLDEKVQSVPLGAATFTSPSNTPASVSPKLNLDIKKEVEKDKAGSEEKPKDKEKPGEEEEKYDISSKYHYLTENDLEESPKGGLDILKSLENTVMSAINKAQNGTPSWGGYPSIHAAYQLPNMMKLSLGSSGKNTALKPLFGNNEIVSPTKSQALISPPSSQTSPMPKTNFHAMEELVKKVTEKVAKVEEKMKEPEGKLVPPKRATPSPWGSELSDPVKMEAAHGAGLKSQEGSPSSPPRDGCKEGSPKAEPVENGKELAKPLSTGLSGSTAIITEHPQEQPFVNPLSALQSVMNVHLGKAAKPSLTTLDPMSMLFKMSNSLAEKAAMATPPPPLPLSKKADHPDRYFYHFNNDQPIDLTKGKREKGYSGGSGLLSPTSTSPATSSSLVTTAKTSISFMSNSPLRENALSDISDMLKNLTESHTSKSSTPSSISEKSDLDGTALEEAEEATPAQKRKGRQSNWNPQHLLILQAQFAASLRQTSEGKFIMSDLSPQECTHISCFTGLPMTTISHWLANVKYQLRRTGGTKFLKNLDTSHPVFFCNDCASQIRTPSMYISHLESHLGFRLRDLSKLSTEQINNQIAQTKSPSSDKLVSSSPEEDLGTSYQCKLCNRTFASKHAVKLHLSKTHGKSPEDHLLYVSELEKQ
SIO_010081: LOC125363977
subclass of: SO_0000673
so part of: LOC125363977
location: 544867..548093
location: region:544867-548093:1
so has part: feature:544867-548093:1:exon

XP_048219285.1
type: Protein
SIO_000068: ncbiprotein

position:548093:1
position: 548093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544867-548093:1:exon

LOC125364224
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(662749..687475)
location: region:662749-687475:-1
so has part: feature:662749-687475:-1:exon

125364224
type: Gene
SIO_000068: ncbigene

position:662749:-1
position: 662749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687475:-1
position: 687475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662749-687475:-1:exon

LOC125364224
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125364224
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC125364224
subclass of: SO_0000673
so part of: LOC125364224
location: complement(662749..663330)
location: region:662749-663330:-1
so has part: feature:662749-663330:-1:exon

position:663330:-1
position: 663330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662749-663330:-1:exon

LOC125364325
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364325
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(685523..685634)
location: region:685523-685634:-1
so has part: feature:685523-685634:-1:exon
subclass of: SO_0000623

125364325
type: Gene
SIO_000068: ncbigene

position:685523:-1
position: 685523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685634:-1
position: 685634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685523-685634:-1:exon

LOC125364325
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snRNA
gene: LOC125364325
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007213484.1
SIO_010081: LOC125364325
subclass of: SO_0000673
so part of: LOC125364325
location: complement(685523..685634)
location: region:685523-685634:-1
so has part: feature:685523-685634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685523-685634:-1:exon

LOC125364224
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125364224
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC125364224
subclass of: SO_0000673
so part of: LOC125364224
location: complement(686939..687053)
location: region:686939-687053:-1
so has part: feature:686939-687053:-1:exon

position:686939:-1
position: 686939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687053:-1
position: 687053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686939-687053:-1:exon

LOC125364224
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125364224
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC125364224
subclass of: SO_0000673
so part of: LOC125364224
location: complement(687216..687475)
location: region:687216-687475:-1
so has part: feature:687216-687475:-1:exon

position:687216:-1
position: 687216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687216-687475:-1:exon

Rock1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Rock1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 689042..812858
location: region:689042-812858:1
so has part: feature:689042-812858:1:exon
subclass of: SO_0000010

125364223
type: Gene
SIO_000068: ncbigene

position:689042:1
position: 689042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812858:1
position: 812858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689042-812858:1:exon

Rock1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rock1
product: Rho associated coiled-coil containing protein kinase 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363694.1
SIO_010081: Rock1
subclass of: SO_0000673
so part of: Rock1
location: join(689042..690070,717894..717975,730603..730703,731188..731325,735077..735252,736015..736099,738741..738885,739209..739347,741847..741938,744492..744651,748613..748673,753906..753994,755688..755736,759389..759524,761059..761150,761252..761498,770353..770459,771972..772122,774156..774316,775331..775515,777954..778023,780992..781086,789253..789418,791465..791558,792188..792276,796112..796300,796695..796854,803199..803269,803470..803558,807506..807584,807745..808006,809632..809839,811412..812858)
location: region:689042-812858:1
so has part: feature:689042-690070:1:exon
so has part: feature:717894-717975:1:exon
so has part: feature:730603-730703:1:exon
so has part: feature:731188-731325:1:exon
so has part: feature:735077-735252:1:exon
so has part: feature:736015-736099:1:exon
so has part: feature:738741-738885:1:exon
so has part: feature:739209-739347:1:exon
so has part: feature:741847-741938:1:exon
so has part: feature:744492-744651:1:exon
so has part: feature:748613-748673:1:exon
so has part: feature:753906-753994:1:exon
so has part: feature:755688-755736:1:exon
so has part: feature:759389-759524:1:exon
so has part: feature:761059-761150:1:exon
so has part: feature:761252-761498:1:exon
so has part: feature:770353-770459:1:exon
so has part: feature:771972-772122:1:exon
so has part: feature:774156-774316:1:exon
so has part: feature:775331-775515:1:exon
so has part: feature:777954-778023:1:exon
so has part: feature:780992-781086:1:exon
so has part: feature:789253-789418:1:exon
so has part: feature:791465-791558:1:exon
so has part: feature:792188-792276:1:exon
so has part: feature:796112-796300:1:exon
so has part: feature:796695-796854:1:exon
so has part: feature:803199-803269:1:exon
so has part: feature:803470-803558:1:exon
so has part: feature:807506-807584:1:exon
so has part: feature:807745-808006:1:exon
so has part: feature:809632-809839:1:exon
so has part: feature:811412-812858:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:689042-690070:1:exon

position:690070:1
position: 690070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:717894-717975:1:exon

position:717894:1
position: 717894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717975:1
position: 717975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:730603-730703:1:exon

position:730603:1
position: 730603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730703:1
position: 730703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:731188-731325:1:exon

position:731188:1
position: 731188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731325:1
position: 731325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:735077-735252:1:exon

position:735077:1
position: 735077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735252:1
position: 735252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:736015-736099:1:exon

position:736015:1
position: 736015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736099:1
position: 736099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:738741-738885:1:exon

position:738741:1
position: 738741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738885:1
position: 738885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:739209-739347:1:exon

position:739209:1
position: 739209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739347:1
position: 739347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:741847-741938:1:exon

position:741847:1
position: 741847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741938:1
position: 741938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:744492-744651:1:exon

position:744492:1
position: 744492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744651:1
position: 744651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:748613-748673:1:exon

position:748613:1
position: 748613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748673:1
position: 748673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:753906-753994:1:exon

position:753906:1
position: 753906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753994:1
position: 753994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:755688-755736:1:exon

position:755688:1
position: 755688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755736:1
position: 755736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:759389-759524:1:exon

position:759389:1
position: 759389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759524:1
position: 759524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:761059-761150:1:exon

position:761059:1
position: 761059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761150:1
position: 761150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:761252-761498:1:exon

position:761252:1
position: 761252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761498:1
position: 761498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:770353-770459:1:exon

position:770353:1
position: 770353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770459:1
position: 770459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:771972-772122:1:exon

position:771972:1
position: 771972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772122:1
position: 772122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:774156-774316:1:exon

position:774156:1
position: 774156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774316:1
position: 774316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:775331-775515:1:exon

position:775331:1
position: 775331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775515:1
position: 775515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:777954-778023:1:exon

position:777954:1
position: 777954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778023:1
position: 778023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:780992-781086:1:exon

position:780992:1
position: 780992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781086:1
position: 781086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:789253-789418:1:exon

position:789253:1
position: 789253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789418:1
position: 789418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:791465-791558:1:exon

position:791465:1
position: 791465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791558:1
position: 791558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:792188-792276:1:exon

position:792188:1
position: 792188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792276:1
position: 792276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:796112-796300:1:exon

position:796112:1
position: 796112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796300:1
position: 796300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:796695-796854:1:exon

position:796695:1
position: 796695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796854:1
position: 796854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:803199-803269:1:exon

position:803199:1
position: 803199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803269:1
position: 803269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:803470-803558:1:exon

position:803470:1
position: 803470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803558:1
position: 803558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:807506-807584:1:exon

position:807506:1
position: 807506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807584:1
position: 807584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:807745-808006:1:exon

position:807745:1
position: 807745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808006:1
position: 808006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:809632-809839:1:exon

position:809632:1
position: 809632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809839:1
position: 809839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:811412-812858:1:exon

position:811412:1
position: 811412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rock1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rock1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-associated protein kinase 1 isoform X1
translation: MSTGDSFETRFEKIDNLLRDPKSEVNSDCLLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGDEETFPIPKAFVGNQLPFVGFTYYSNRRYLSPTNPNDNRTSSNADKSLQESLQKTIYKLEEQLHNEIQLKDEMEQKCRTSNIKLDKIMKELDEEGNQRRNLESTVSQIEKEKMLLQHKINEYQRKAEQENEKRRNIENEVSTLKDQLEDLKKVSQNSQLANEKLTQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQMQAVLEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLERVEEERKEAQDMLNYSEKEKNNLEIDLNYKLKLLQQRLEQEVNEHKVTKARLTDKHQSIEEAKSVAMCEMEKKLKEEREAREKAENRVVQTEKQCSMLDVDLKQSQQKLEHLAENKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKGLEKQMKQEINTLLEAKRLLEFELAQLTKQYRGNEGQMRELQDQLEAEQYFSTLYKTQVKELKEEIEEKNRENLKKIQELQNEKETLSTQLDLAETKAESEQLARGLLEEQYFELTQESKKAASRNRQEITDKDHTVSRLEETNSMLTKDIELLRKENEELTENMRKAEEEYKLKKEEEINNLKAAFEKNISTERTLKTQAVNKLAEIMNRKDFKIDRKKANTQDLRKKEKENRKLQLELNQEREKFNQMVVKHQKELNDMQAQLVEECTHKNELQMQLASKESDIEQLRAKLLDLSDSTSVASFPSADETDGNLPESRIEGWLSVPNRGNIKRYGWKKQYVVVSSKKILFYNDEQDKEQSNPSMVLDIDKLFHVRPVTQGDVYRAETEEIPKIFQILYANEGECRKEVEMEPVQQTEKTNFQNHKGHEFIPTLYHFPANCEACAKPLWHVFKPPPALECRRCHVKCHRDHLDKKEDLISPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPSGFVRASPRTLSTRSTANQSFRKVVKNTSGKTC
SIO_010081: Rock1
subclass of: SO_0000673
so part of: Rock1
location: join(689978..690070,717894..717975,730603..730703,731188..731325,735077..735252,736015..736099,738741..738885,739209..739347,741847..741938,744492..744651,748613..748673,753906..753994,755688..755736,759389..759524,761059..761150,761252..761498,770353..770459,771972..772122,774156..774316,775331..775515,777954..778023,780992..781086,789253..789418,791465..791558,792188..792276,796112..796300,796695..796854,803199..803269,803470..803558,807506..807584,807745..808006,809632..809839,811412..811415)
location: region:689978-811415:1
so has part: feature:689978-690070:1:exon
so has part: feature:717894-717975:1:exon
so has part: feature:730603-730703:1:exon
so has part: feature:731188-731325:1:exon
so has part: feature:735077-735252:1:exon
so has part: feature:736015-736099:1:exon
so has part: feature:738741-738885:1:exon
so has part: feature:739209-739347:1:exon
so has part: feature:741847-741938:1:exon
so has part: feature:744492-744651:1:exon
so has part: feature:748613-748673:1:exon
so has part: feature:753906-753994:1:exon
so has part: feature:755688-755736:1:exon
so has part: feature:759389-759524:1:exon
so has part: feature:761059-761150:1:exon
so has part: feature:761252-761498:1:exon
so has part: feature:770353-770459:1:exon
so has part: feature:771972-772122:1:exon
so has part: feature:774156-774316:1:exon
so has part: feature:775331-775515:1:exon
so has part: feature:777954-778023:1:exon
so has part: feature:780992-781086:1:exon
so has part: feature:789253-789418:1:exon
so has part: feature:791465-791558:1:exon
so has part: feature:792188-792276:1:exon
so has part: feature:796112-796300:1:exon
so has part: feature:796695-796854:1:exon
so has part: feature:803199-803269:1:exon
so has part: feature:803470-803558:1:exon
so has part: feature:807506-807584:1:exon
so has part: feature:807745-808006:1:exon
so has part: feature:809632-809839:1:exon
so has part: feature:811412-811415:1:exon

XP_048219651.1
type: Protein
SIO_000068: ncbiprotein

position:689978:1
position: 689978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811415:1
position: 811415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689978-690070:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:717894-717975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730603-730703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731188-731325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735077-735252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:736015-736099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:738741-738885:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739209-739347:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:741847-741938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:744492-744651:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:748613-748673:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:753906-753994:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:755688-755736:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:759389-759524:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:761059-761150:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:761252-761498:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:770353-770459:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:771972-772122:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:774156-774316:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:775331-775515:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:777954-778023:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:780992-781086:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:789253-789418:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:791465-791558:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:792188-792276:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:796112-796300:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:796695-796854:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:803199-803269:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:803470-803558:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:807506-807584:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:807745-808006:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:809632-809839:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:811412-811415:1:exon

Rock1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Rock1
product: Rho associated coiled-coil containing protein kinase 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363696.1
SIO_010081: Rock1
subclass of: SO_0000673
so part of: Rock1
location: join(701523..701529,706893..706896,717894..717975,730603..730703,731188..731325,735077..735252,736015..736099,738741..738885,739209..739347,741847..741938,744492..744651,748613..748673,753906..753994,755688..755736,759389..759524,761059..761150,761252..761498,770353..770459,771972..772122,774156..774316,775331..775515,777954..778023,780992..781086,789253..789418,791465..791558,792188..792276,796112..796300,796695..796854,803199..803269,803470..803558,807506..807584,807745..808006,809632..809839,811412..812858)
location: region:701523-812858:1
so has part: feature:701523-701529:1:exon
so has part: feature:706893-706896:1:exon
so has part: feature:717894-717975:1:exon
so has part: feature:730603-730703:1:exon
so has part: feature:731188-731325:1:exon
so has part: feature:735077-735252:1:exon
so has part: feature:736015-736099:1:exon
so has part: feature:738741-738885:1:exon
so has part: feature:739209-739347:1:exon
so has part: feature:741847-741938:1:exon
so has part: feature:744492-744651:1:exon
so has part: feature:748613-748673:1:exon
so has part: feature:753906-753994:1:exon
so has part: feature:755688-755736:1:exon
so has part: feature:759389-759524:1:exon
so has part: feature:761059-761150:1:exon
so has part: feature:761252-761498:1:exon
so has part: feature:770353-770459:1:exon
so has part: feature:771972-772122:1:exon
so has part: feature:774156-774316:1:exon
so has part: feature:775331-775515:1:exon
so has part: feature:777954-778023:1:exon
so has part: feature:780992-781086:1:exon
so has part: feature:789253-789418:1:exon
so has part: feature:791465-791558:1:exon
so has part: feature:792188-792276:1:exon
so has part: feature:796112-796300:1:exon
so has part: feature:796695-796854:1:exon
so has part: feature:803199-803269:1:exon
so has part: feature:803470-803558:1:exon
so has part: feature:807506-807584:1:exon
so has part: feature:807745-808006:1:exon
so has part: feature:809632-809839:1:exon
so has part: feature:811412-812858:1:exon

position:701523:1
position: 701523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701523-701529:1:exon

position:701529:1
position: 701529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:706893-706896:1:exon

position:706893:1
position: 706893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706896:1
position: 706896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:717894-717975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730603-730703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:731188-731325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735077-735252:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:736015-736099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:738741-738885:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:739209-739347:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:741847-741938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:744492-744651:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:748613-748673:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:753906-753994:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:755688-755736:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:759389-759524:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:761059-761150:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:761252-761498:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:770353-770459:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:771972-772122:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:774156-774316:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:775331-775515:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:777954-778023:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:780992-781086:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:789253-789418:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:791465-791558:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:792188-792276:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:796112-796300:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:796695-796854:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:803199-803269:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:803470-803558:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:807506-807584:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:807745-808006:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:809632-809839:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:811412-812858:1:exon

LOC125364225
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(727323..727710)
location: region:727323-727710:-1
so has part: feature:727323-727710:-1:exon
subclass of: SO_0000010

125364225
type: Gene
SIO_000068: ncbigene

position:727323:-1
position: 727323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727710:-1
position: 727710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727323-727710:-1:exon

LOC125364225
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125364225
product: UPF0729 protein C18orf32 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048363697.1
SIO_010081: LOC125364225
subclass of: SO_0000673
so part of: LOC125364225
location: complement(727323..727710)
location: region:727323-727710:-1
so has part: feature:727323-727710:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:727323-727710:-1:exon

LOC125364225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125364225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0729 protein C18orf32 homolog
translation: MVCIPCIVIPVLLWIFKKFLEPYLYPLVSPFVGCIWPKKAVQEASDKNKGSVGCKAADPNGLPTKGPTEISDKKKD
SIO_010081: LOC125364225
subclass of: SO_0000673
so part of: LOC125364225
location: complement(727392..727622)
location: region:727392-727622:-1
so has part: feature:727392-727622:-1:exon

XP_048219654.1
type: Protein
SIO_000068: ncbiprotein

position:727392:-1
position: 727392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727622:-1
position: 727622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727392-727622:-1:exon

Rock1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Rock1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-associated protein kinase 1 isoform X2
translation: MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGDEETFPIPKAFVGNQLPFVGFTYYSNRRYLSPTNPNDNRTSSNADKSLQESLQKTIYKLEEQLHNEIQLKDEMEQKCRTSNIKLDKIMKELDEEGNQRRNLESTVSQIEKEKMLLQHKINEYQRKAEQENEKRRNIENEVSTLKDQLEDLKKVSQNSQLANEKLTQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQMQAVLEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLERVEEERKEAQDMLNYSEKEKNNLEIDLNYKLKLLQQRLEQEVNEHKVTKARLTDKHQSIEEAKSVAMCEMEKKLKEEREAREKAENRVVQTEKQCSMLDVDLKQSQQKLEHLAENKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKGLEKQMKQEINTLLEAKRLLEFELAQLTKQYRGNEGQMRELQDQLEAEQYFSTLYKTQVKELKEEIEEKNRENLKKIQELQNEKETLSTQLDLAETKAESEQLARGLLEEQYFELTQESKKAASRNRQEITDKDHTVSRLEETNSMLTKDIELLRKENEELTENMRKAEEEYKLKKEEEINNLKAAFEKNISTERTLKTQAVNKLAEIMNRKDFKIDRKKANTQDLRKKEKENRKLQLELNQEREKFNQMVVKHQKELNDMQAQLVEECTHKNELQMQLASKESDIEQLRAKLLDLSDSTSVASFPSADETDGNLPESRIEGWLSVPNRGNIKRYGWKKQYVVVSSKKILFYNDEQDKEQSNPSMVLDIDKLFHVRPVTQGDVYRAETEEIPKIFQILYANEGECRKEVEMEPVQQTEKTNFQNHKGHEFIPTLYHFPANCEACAKPLWHVFKPPPALECRRCHVKCHRDHLDKKEDLISPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPSGFVRASPRTLSTRSTANQSFRKVVKNTSGKTC
SIO_010081: Rock1
subclass of: SO_0000673
so part of: Rock1
location: join(730638..730703,731188..731325,735077..735252,736015..736099,738741..738885,739209..739347,741847..741938,744492..744651,748613..748673,753906..753994,755688..755736,759389..759524,761059..761150,761252..761498,770353..770459,771972..772122,774156..774316,775331..775515,777954..778023,780992..781086,789253..789418,791465..791558,792188..792276,796112..796300,796695..796854,803199..803269,803470..803558,807506..807584,807745..808006,809632..809839,811412..811415)
location: region:730638-811415:1
so has part: feature:730638-730703:1:exon
so has part: feature:731188-731325:1:exon
so has part: feature:735077-735252:1:exon
so has part: feature:736015-736099:1:exon
so has part: feature:738741-738885:1:exon
so has part: feature:739209-739347:1:exon
so has part: feature:741847-741938:1:exon
so has part: feature:744492-744651:1:exon
so has part: feature:748613-748673:1:exon
so has part: feature:753906-753994:1:exon
so has part: feature:755688-755736:1:exon
so has part: feature:759389-759524:1:exon
so has part: feature:761059-761150:1:exon
so has part: feature:761252-761498:1:exon
so has part: feature:770353-770459:1:exon
so has part: feature:771972-772122:1:exon
so has part: feature:774156-774316:1:exon
so has part: feature:775331-775515:1:exon
so has part: feature:777954-778023:1:exon
so has part: feature:780992-781086:1:exon
so has part: feature:789253-789418:1:exon
so has part: feature:791465-791558:1:exon
so has part: feature:792188-792276:1:exon
so has part: feature:796112-796300:1:exon
so has part: feature:796695-796854:1:exon
so has part: feature:803199-803269:1:exon
so has part: feature:803470-803558:1:exon
so has part: feature:807506-807584:1:exon
so has part: feature:807745-808006:1:exon
so has part: feature:809632-809839:1:exon
so has part: feature:811412-811415:1:exon

XP_048219653.1
type: Protein
SIO_000068: ncbiprotein

position:730638:1
position: 730638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730638-730703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:731188-731325:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:735077-735252:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:736015-736099:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:738741-738885:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739209-739347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741847-741938:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:744492-744651:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:748613-748673:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:753906-753994:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:755688-755736:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:759389-759524:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:761059-761150:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:761252-761498:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:770353-770459:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:771972-772122:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:774156-774316:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:775331-775515:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:777954-778023:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:780992-781086:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:789253-789418:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:791465-791558:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:792188-792276:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:796112-796300:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:796695-796854:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:803199-803269:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:803470-803558:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:807506-807584:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:807745-808006:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:809632-809839:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:811412-811415:1:exon

Usp14
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Usp14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 836478..882018
location: region:836478-882018:1
so has part: feature:836478-882018:1:exon
subclass of: SO_0000010

125364270
type: Gene
SIO_000068: ncbigene

position:836478:1
position: 836478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882018:1
position: 882018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836478-882018:1:exon

Usp14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Usp14
product: ubiquitin specific peptidase 14
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363758.1
SIO_010081: Usp14
subclass of: SO_0000673
so part of: Usp14
location: join(836478..836684,847731..847876,849717..849749,854733..854837,856846..856949,861055..861113,868843..868973,871230..871310,871906..871991,872580..872694,875032..875097,875251..875343,877216..877344,879447..879507,880034..880141,881292..882018)
location: region:836478-882018:1
so has part: feature:836478-836684:1:exon
so has part: feature:847731-847876:1:exon
so has part: feature:849717-849749:1:exon
so has part: feature:854733-854837:1:exon
so has part: feature:856846-856949:1:exon
so has part: feature:861055-861113:1:exon
so has part: feature:868843-868973:1:exon
so has part: feature:871230-871310:1:exon
so has part: feature:871906-871991:1:exon
so has part: feature:872580-872694:1:exon
so has part: feature:875032-875097:1:exon
so has part: feature:875251-875343:1:exon
so has part: feature:877216-877344:1:exon
so has part: feature:879447-879507:1:exon
so has part: feature:880034-880141:1:exon
so has part: feature:881292-882018:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:836478-836684:1:exon

position:836684:1
position: 836684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:847731-847876:1:exon

position:847731:1
position: 847731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847876:1
position: 847876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:849717-849749:1:exon

position:849717:1
position: 849717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849749:1
position: 849749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:854733-854837:1:exon

position:854733:1
position: 854733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854837:1
position: 854837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:856846-856949:1:exon

position:856846:1
position: 856846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856949:1
position: 856949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:861055-861113:1:exon

position:861055:1
position: 861055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861113:1
position: 861113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:868843-868973:1:exon

position:868843:1
position: 868843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868973:1
position: 868973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:871230-871310:1:exon

position:871230:1
position: 871230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871310:1
position: 871310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:871906-871991:1:exon

position:871906:1
position: 871906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871991:1
position: 871991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:872580-872694:1:exon

position:872580:1
position: 872580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872694:1
position: 872694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:875032-875097:1:exon

position:875032:1
position: 875032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875097:1
position: 875097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:875251-875343:1:exon

position:875251:1
position: 875251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875343:1
position: 875343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:877216-877344:1:exon

position:877216:1
position: 877216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877344:1
position: 877344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:879447-879507:1:exon

position:879447:1
position: 879447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879507:1
position: 879507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:880034-880141:1:exon

position:880034:1
position: 880034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880141:1
position: 880141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:881292-882018:1:exon

position:881292:1
position: 881292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Usp14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Usp14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 14
translation: MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKIKTGMTVLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSSASAVPPSKKKSLIDQFFGLEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPELQEKMISFRSKFKDLEDKKVNQQPNVCDKKGSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEVMEDESEQ
SIO_010081: Usp14
subclass of: SO_0000673
so part of: Usp14
location: join(836669..836684,847731..847876,849717..849749,854733..854837,856846..856949,861055..861113,868843..868973,871230..871310,871906..871991,872580..872694,875032..875097,875251..875343,877216..877344,879447..879507,880034..880141,881292..881443)
location: region:836669-881443:1
so has part: feature:836669-836684:1:exon
so has part: feature:847731-847876:1:exon
so has part: feature:849717-849749:1:exon
so has part: feature:854733-854837:1:exon
so has part: feature:856846-856949:1:exon
so has part: feature:861055-861113:1:exon
so has part: feature:868843-868973:1:exon
so has part: feature:871230-871310:1:exon
so has part: feature:871906-871991:1:exon
so has part: feature:872580-872694:1:exon
so has part: feature:875032-875097:1:exon
so has part: feature:875251-875343:1:exon
so has part: feature:877216-877344:1:exon
so has part: feature:879447-879507:1:exon
so has part: feature:880034-880141:1:exon
so has part: feature:881292-881443:1:exon

XP_048219715.1
type: Protein
SIO_000068: ncbiprotein

position:836669:1
position: 836669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881443:1
position: 881443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836669-836684:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:847731-847876:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:849717-849749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854733-854837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:856846-856949:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861055-861113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868843-868973:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871230-871310:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871906-871991:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:872580-872694:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:875032-875097:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:875251-875343:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:877216-877344:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:879447-879507:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:880034-880141:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:881292-881443:1:exon

LOC125364272
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(841896..844454)
location: region:841896-844454:-1
so has part: feature:841896-844454:-1:exon

125364272
type: Gene
SIO_000068: ncbigene

position:841896:-1
position: 841896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844454:-1
position: 844454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:841896-844454:-1:exon

LOC125364272
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125364272
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125364272
subclass of: SO_0000673
so part of: LOC125364272
location: complement(841896..844454)
location: region:841896-844454:-1
so has part: feature:841896-844454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:841896-844454:-1:exon

LOC125364271
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(863609..864980)
location: region:863609-864980:-1
so has part: feature:863609-864980:-1:exon
subclass of: SO_0000010

125364271
type: Gene
SIO_000068: ncbigene

position:863609:-1
position: 863609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864980:-1
position: 864980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863609-864980:-1:exon

LOC125364271
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125364271
product: tripartite motif-containing protein 59-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048363759.1
SIO_010081: LOC125364271
subclass of: SO_0000673
so part of: LOC125364271
location: complement(863609..864980)
location: region:863609-864980:-1
so has part: feature:863609-864980:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:863609-864980:-1:exon

LOC125364271
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125364271
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(863705..863707),aa:OTHER)
product: LOW QUALITY PROTEIN: tripartite motif-containing protein 59-like
translation: MHNFEDELTYPICYSISEDPRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCPNCRSIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHCLTIGQHHGHPIDDLQSAYLKEKDTPRSLLKQLTDAHWTDITCLIEKLEQKSHSEKMVQSDKEVVLQYFKELTDILEQKKRXFLTTLCDVGNLMSQEYTPQIERLKEIREQQLELVTMTTSLQEESPLKFLEKIDDVRQRVQMLKERPLPDVQPVEIQPRVSKVLKEEWNRTEIGKIRKAFIPEMKISSKRVPCSWPDKDEKEIELFKILNIAIVTLISVILMLILLFNHHIITFLNEITSICFSEVSLSIXQSLSNNLHDLQNILCHPFYFLKEFMWGK
SIO_010081: LOC125364271
subclass of: SO_0000673
so part of: LOC125364271
location: complement(863618..864816)
location: region:863618-864816:-1
so has part: feature:863618-864816:-1:exon

XP_048219716.1
type: Protein
SIO_000068: ncbiprotein

position:863618:-1
position: 863618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864816:-1
position: 864816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863618-864816:-1:exon

Thoc1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Thoc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(884020..930944)
location: region:884020-930944:-1
so has part: feature:884020-930944:-1:exon
subclass of: SO_0000010

125364269
type: Gene
SIO_000068: ncbigene

position:884020:-1
position: 884020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930944:-1
position: 930944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884020-930944:-1:exon

Thoc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Thoc1
product: THO complex 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363756.1
SIO_010081: Thoc1
subclass of: SO_0000673
so part of: Thoc1
location: complement(join(884020..884415,884834..884858,885684..885831,888876..888959,893877..893942,894476..894571,895105..895175,895262..895312,895511..895577,897015..897115,901109..901240,903038..903146,907539..907612,911118..911200,924071..924166,925021..925069,925619..925737,926804..926870,927871..927931,928025..928098,930792..930944))
location: region:884020-930944:-1
so has part: feature:930792-930944:-1:exon
so has part: feature:928025-928098:-1:exon
so has part: feature:927871-927931:-1:exon
so has part: feature:926804-926870:-1:exon
so has part: feature:925619-925737:-1:exon
so has part: feature:925021-925069:-1:exon
so has part: feature:924071-924166:-1:exon
so has part: feature:911118-911200:-1:exon
so has part: feature:907539-907612:-1:exon
so has part: feature:903038-903146:-1:exon
so has part: feature:901109-901240:-1:exon
so has part: feature:897015-897115:-1:exon
so has part: feature:895511-895577:-1:exon
so has part: feature:895262-895312:-1:exon
so has part: feature:895105-895175:-1:exon
so has part: feature:894476-894571:-1:exon
so has part: feature:893877-893942:-1:exon
so has part: feature:888876-888959:-1:exon
so has part: feature:885684-885831:-1:exon
so has part: feature:884834-884858:-1:exon
so has part: feature:884020-884415:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:930792-930944:-1:exon

position:930792:-1
position: 930792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:928025-928098:-1:exon

position:928025:-1
position: 928025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928098:-1
position: 928098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:927871-927931:-1:exon

position:927871:-1
position: 927871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927931:-1
position: 927931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:926804-926870:-1:exon

position:926804:-1
position: 926804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926870:-1
position: 926870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:925619-925737:-1:exon

position:925619:-1
position: 925619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925737:-1
position: 925737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:925021-925069:-1:exon

position:925021:-1
position: 925021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925069:-1
position: 925069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:924071-924166:-1:exon

position:924071:-1
position: 924071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:924166:-1
position: 924166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:911118-911200:-1:exon

position:911118:-1
position: 911118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911200:-1
position: 911200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:907539-907612:-1:exon

position:907539:-1
position: 907539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:907612:-1
position: 907612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:903038-903146:-1:exon

position:903038:-1
position: 903038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903146:-1
position: 903146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:901109-901240:-1:exon

position:901109:-1
position: 901109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901240:-1
position: 901240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:897015-897115:-1:exon

position:897015:-1
position: 897015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897115:-1
position: 897115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:895511-895577:-1:exon

position:895511:-1
position: 895511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895577:-1
position: 895577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:895262-895312:-1:exon

position:895262:-1
position: 895262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895312:-1
position: 895312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:895105-895175:-1:exon

position:895105:-1
position: 895105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895175:-1
position: 895175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:894476-894571:-1:exon

position:894476:-1
position: 894476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894571:-1
position: 894571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:893877-893942:-1:exon

position:893877:-1
position: 893877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893942:-1
position: 893942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:888876-888959:-1:exon

position:888876:-1
position: 888876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888959:-1
position: 888959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:885684-885831:-1:exon

position:885684:-1
position: 885684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885831:-1
position: 885831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:884834-884858:-1:exon

position:884834:-1
position: 884834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884858:-1
position: 884858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:884020-884415:-1:exon

position:884415:-1
position: 884415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Thoc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Thoc1
product: THO complex 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363755.1
SIO_010081: Thoc1
subclass of: SO_0000673
so part of: Thoc1
location: complement(join(884020..884415,884783..884858,885684..885831,888876..888959,893877..893942,894476..894571,895105..895175,895262..895312,895511..895577,897015..897115,901109..901240,903038..903146,907539..907612,911118..911200,924071..924166,925021..925069,925619..925737,926804..926870,927871..927931,928025..928098,930792..930944))
location: region:884020-930944:-1
so has part: feature:930792-930944:-1:exon
so has part: feature:928025-928098:-1:exon
so has part: feature:927871-927931:-1:exon
so has part: feature:926804-926870:-1:exon
so has part: feature:925619-925737:-1:exon
so has part: feature:925021-925069:-1:exon
so has part: feature:924071-924166:-1:exon
so has part: feature:911118-911200:-1:exon
so has part: feature:907539-907612:-1:exon
so has part: feature:903038-903146:-1:exon
so has part: feature:901109-901240:-1:exon
so has part: feature:897015-897115:-1:exon
so has part: feature:895511-895577:-1:exon
so has part: feature:895262-895312:-1:exon
so has part: feature:895105-895175:-1:exon
so has part: feature:894476-894571:-1:exon
so has part: feature:893877-893942:-1:exon
so has part: feature:888876-888959:-1:exon
so has part: feature:885684-885831:-1:exon
so has part: feature:884783-884858:-1:exon
so has part: feature:884020-884415:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:930792-930944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928025-928098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927871-927931:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:926804-926870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:925619-925737:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:925021-925069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:924071-924166:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:911118-911200:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:907539-907612:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:903038-903146:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:901109-901240:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:897015-897115:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895511-895577:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:895262-895312:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:895105-895175:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:894476-894571:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:893877-893942:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:888876-888959:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:885684-885831:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:884783-884858:-1:exon

position:884783:-1
position: 884783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:884020-884415:-1:exon

Thoc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Thoc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THO complex subunit 1 isoform X2
translation: MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFTQLPGSENEKKCTLDQAFRGVLEEEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNVATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFNLENVTVFNTNEQESTLGQKHSEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWSLQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSETKPTRVVRKRAAPEDFLGKGANKKILMGNEELTRLWNLCPDNMEACKSDTREYMPTLEEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGPDVRRDKPVTGEQLELFANKLGEQWKILAPYLEMKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGAHATPDSLISALNKSGLSDLAESLTNDETNS
SIO_010081: Thoc1
subclass of: SO_0000673
so part of: Thoc1
location: complement(join(884123..884415,884834..884858,885684..885831,888876..888959,893877..893942,894476..894571,895105..895175,895262..895312,895511..895577,897015..897115,901109..901240,903038..903146,907539..907612,911118..911200,924071..924166,925021..925069,925619..925737,926804..926870,927871..927931,928025..928098,930792..930845))
location: region:884123-930845:-1
so has part: feature:930792-930845:-1:exon
so has part: feature:928025-928098:-1:exon
so has part: feature:927871-927931:-1:exon
so has part: feature:926804-926870:-1:exon
so has part: feature:925619-925737:-1:exon
so has part: feature:925021-925069:-1:exon
so has part: feature:924071-924166:-1:exon
so has part: feature:911118-911200:-1:exon
so has part: feature:907539-907612:-1:exon
so has part: feature:903038-903146:-1:exon
so has part: feature:901109-901240:-1:exon
so has part: feature:897015-897115:-1:exon
so has part: feature:895511-895577:-1:exon
so has part: feature:895262-895312:-1:exon
so has part: feature:895105-895175:-1:exon
so has part: feature:894476-894571:-1:exon
so has part: feature:893877-893942:-1:exon
so has part: feature:888876-888959:-1:exon
so has part: feature:885684-885831:-1:exon
so has part: feature:884834-884858:-1:exon
so has part: feature:884123-884415:-1:exon

XP_048219713.1
type: Protein
SIO_000068: ncbiprotein

position:884123:-1
position: 884123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930845:-1
position: 930845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:930792-930845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928025-928098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927871-927931:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:926804-926870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:925619-925737:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:925021-925069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:924071-924166:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:911118-911200:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:907539-907612:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:903038-903146:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:901109-901240:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:897015-897115:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895511-895577:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:895262-895312:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:895105-895175:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:894476-894571:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:893877-893942:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:888876-888959:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:885684-885831:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:884834-884858:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:884123-884415:-1:exon

Thoc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Thoc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THO complex subunit 1 isoform X1
translation: MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFTQLPGSENEKKCTLDQAFRGVLEEEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNVATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFNLENVTVFNTNEQESTLGQKHSEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWSLQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSETKPTRVVRKRAAPEDFLGKGANKKILMGNEELTRLWNLCPDNMEACKSDTREYMPTLEEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVTGEQLELFANKLGEQWKILAPYLEMKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGAHATPDSLISALNKSGLSDLAESLTNDETNS
SIO_010081: Thoc1
subclass of: SO_0000673
so part of: Thoc1
location: complement(join(884123..884415,884783..884858,885684..885831,888876..888959,893877..893942,894476..894571,895105..895175,895262..895312,895511..895577,897015..897115,901109..901240,903038..903146,907539..907612,911118..911200,924071..924166,925021..925069,925619..925737,926804..926870,927871..927931,928025..928098,930792..930845))
location: region:884123-930845:-1
so has part: feature:930792-930845:-1:exon
so has part: feature:928025-928098:-1:exon
so has part: feature:927871-927931:-1:exon
so has part: feature:926804-926870:-1:exon
so has part: feature:925619-925737:-1:exon
so has part: feature:925021-925069:-1:exon
so has part: feature:924071-924166:-1:exon
so has part: feature:911118-911200:-1:exon
so has part: feature:907539-907612:-1:exon
so has part: feature:903038-903146:-1:exon
so has part: feature:901109-901240:-1:exon
so has part: feature:897015-897115:-1:exon
so has part: feature:895511-895577:-1:exon
so has part: feature:895262-895312:-1:exon
so has part: feature:895105-895175:-1:exon
so has part: feature:894476-894571:-1:exon
so has part: feature:893877-893942:-1:exon
so has part: feature:888876-888959:-1:exon
so has part: feature:885684-885831:-1:exon
so has part: feature:884783-884858:-1:exon
so has part: feature:884123-884415:-1:exon

XP_048219712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:930792-930845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928025-928098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927871-927931:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:926804-926870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:925619-925737:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:925021-925069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:924071-924166:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:911118-911200:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:907539-907612:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:903038-903146:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:901109-901240:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:897015-897115:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895511-895577:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:895262-895312:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:895105-895175:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:894476-894571:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:893877-893942:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:888876-888959:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:885684-885831:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:884783-884858:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:884123-884415:-1:exon

Colec12
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Colec12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(983272..1174513)
location: region:983272-1174513:-1
so has part: feature:983272-1174513:-1:exon
subclass of: SO_0000010

125363806
type: Gene
SIO_000068: ncbigene

position:983272:-1
position: 983272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174513:-1
position: 1174513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983272-1174513:-1:exon

Colec12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Colec12
product: collectin subfamily member 12
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363073.1
SIO_010081: Colec12
subclass of: SO_0000673
so part of: Colec12
location: complement(join(983272..983925,985271..985416,995415..995524,996665..996801,997557..998045,1012512..1013558,1014360..1014458,1024807..1024929,1158943..1158993,1174351..1174513))
location: region:983272-1174513:-1
so has part: feature:1174351-1174513:-1:exon
so has part: feature:1158943-1158993:-1:exon
so has part: feature:1024807-1024929:-1:exon
so has part: feature:1014360-1014458:-1:exon
so has part: feature:1012512-1013558:-1:exon
so has part: feature:997557-998045:-1:exon
so has part: feature:996665-996801:-1:exon
so has part: feature:995415-995524:-1:exon
so has part: feature:985271-985416:-1:exon
so has part: feature:983272-983925:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1174351-1174513:-1:exon

position:1174351:-1
position: 1174351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1158943-1158993:-1:exon

position:1158943:-1
position: 1158943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158993:-1
position: 1158993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1024807-1024929:-1:exon

position:1024807:-1
position: 1024807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024929:-1
position: 1024929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1014360-1014458:-1:exon

position:1014360:-1
position: 1014360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014458:-1
position: 1014458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1012512-1013558:-1:exon

position:1012512:-1
position: 1012512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013558:-1
position: 1013558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:997557-998045:-1:exon

position:997557:-1
position: 997557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998045:-1
position: 998045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:996665-996801:-1:exon

position:996665:-1
position: 996665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996801:-1
position: 996801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:995415-995524:-1:exon

position:995415:-1
position: 995415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995524:-1
position: 995524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:985271-985416:-1:exon

position:985271:-1
position: 985271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985416:-1
position: 985416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:983272-983925:-1:exon

position:983925:-1
position: 983925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Colec12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Colec12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collectin-12
translation: MKDDFAEEEEVQSFGYKRFGIQEGTQCTKCKNNWALKFSIILLYILCALLTITVAILGYKVVEKMDDVTGGMETSRQTYDDKLTAVESDLKKLGDQTGKKALSTNSELSTFRSDILDLRQQLHEITEKTTKNKDTLEKLQASGDVLVDRQSQLKESLENNSFLITTVNKTLQAYNGYVTNLQQDTSVLQGNLQNQMYSHNVVIMNLNNLNLTQLQQRNLITNLQRSVDDTSQAIQRIKNDFQNLQQVFLQAKKDTDWLKEKVHSLQTLAVNNSALAKANNDTLEDMNSQLSSFTGQMDNITTISQANEQNLKDLQDSHKDAENRTAIKFSQLEERFQLFETDIVNIISNISYTAHHLRTLTSNLNEVRTTCTDTLTKHTDDLTFLNNTLANIRLDSVSLRMQQDMMRSRLDTEVANLSVIMEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGSQGPPGPTGNKGQKGEKGEPGPPGPTGERGPIGPAGPPGERGGKGSKGSQGPKGSRGTPGKPGPQGPSGDPGPPGPPGKDGLPGPQGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGPSGAVEPLALQNVPTPVPEANGCPPHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSAHLVFINSREEQQWIKKQIVGRDSHWIGLTDLEKENEWKWLDGTPADYKNWKAGQPDNWGHGHGPGEDCAGLIYAGQWNDFQCEDINNFICEKNRDRVLSSAL
SIO_010081: Colec12
subclass of: SO_0000673
so part of: Colec12
location: complement(join(983906..983925,985271..985416,995415..995524,996665..996801,997557..998045,1012512..1013558,1014360..1014458,1024807..1024929,1158943..1158993,1174351..1174357))
location: region:983906-1174357:-1
so has part: feature:1174351-1174357:-1:exon
so has part: feature:1158943-1158993:-1:exon
so has part: feature:1024807-1024929:-1:exon
so has part: feature:1014360-1014458:-1:exon
so has part: feature:1012512-1013558:-1:exon
so has part: feature:997557-998045:-1:exon
so has part: feature:996665-996801:-1:exon
so has part: feature:995415-995524:-1:exon
so has part: feature:985271-985416:-1:exon
so has part: feature:983906-983925:-1:exon

XP_048219030.1
type: Protein
SIO_000068: ncbiprotein

position:983906:-1
position: 983906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174357:-1
position: 1174357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1174351-1174357:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1158943-1158993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1024807-1024929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1014360-1014458:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1012512-1013558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:997557-998045:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:996665-996801:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:995415-995524:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:985271-985416:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:983906-983925:-1:exon

Cetn1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Cetn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1266646..1267167
location: region:1266646-1267167:1
so has part: feature:1266646-1267167:1:exon
subclass of: SO_0000010

125364112
type: Gene
SIO_000068: ncbigene

position:1266646:1
position: 1266646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267167:1
position: 1267167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1266646-1267167:1:exon

Cetn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Cetn1
product: centrin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048363560.1
SIO_010081: Cetn1
subclass of: SO_0000673
so part of: Cetn1
location: 1266646..1267167
location: region:1266646-1267167:1
so has part: feature:1266646-1267167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1266646-1267167:1:exon

Cetn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Cetn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrin-1
translation: MASSFRKSTAASSASQKRKVGPKPDLTEDQKQEVREAFDLFDADGSGTIDVKELKVAMRALGFEPRKEEMKKMISEVDKEGTGKISFNDFLAMMTQKMAEKDTKEEILKAFRLFDDDETGKISFKNLKRVATELGENLTDEELQEMIDEADRDGDGEVNEDEFLKVMKKTNLY
SIO_010081: Cetn1
subclass of: SO_0000673
so part of: Cetn1
location: 1266646..1267167
location: region:1266646-1267167:1
so has part: feature:1266646-1267167:1:exon

XP_048219517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1266646-1267167:1:exon

LOC125364312
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364312
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1269347..1269453
location: region:1269347-1269453:1
so has part: feature:1269347-1269453:1:exon
subclass of: SO_0000623

125364312
type: Gene
SIO_000068: ncbigene

position:1269347:1
position: 1269347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269453:1
position: 1269453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269347-1269453:1:exon

LOC125364312
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snRNA
gene: LOC125364312
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007213473.1
SIO_010081: LOC125364312
subclass of: SO_0000673
so part of: LOC125364312
location: 1269347..1269453
location: region:1269347-1269453:1
so has part: feature:1269347-1269453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1269347-1269453:1:exon

Clul1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Clul1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1287991..1310788
location: region:1287991-1310788:1
so has part: feature:1287991-1310788:1:exon
subclass of: SO_0000010

125364088
type: Gene
SIO_000068: ncbigene

position:1287991:1
position: 1287991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1310788:1
position: 1310788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1287991-1310788:1:exon

Clul1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Clul1
product: clusterin like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_048363519.1
SIO_010081: Clul1
subclass of: SO_0000673
so part of: Clul1
location: join(1287991..1288096,1289288..1289436,1297506..1297673,1299961..1300381,1303533..1303664,1308086..1308322,1310622..1310788)
location: region:1287991-1310788:1
so has part: feature:1287991-1288096:1:exon
so has part: feature:1289288-1289436:1:exon
so has part: feature:1297506-1297673:1:exon
so has part: feature:1299961-1300381:1:exon
so has part: feature:1303533-1303664:1:exon
so has part: feature:1308086-1308322:1:exon
so has part: feature:1310622-1310788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1287991-1288096:1:exon

position:1288096:1
position: 1288096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1289288-1289436:1:exon

position:1289288:1
position: 1289288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289436:1
position: 1289436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1297506-1297673:1:exon

position:1297506:1
position: 1297506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297673:1
position: 1297673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1299961-1300381:1:exon

position:1299961:1
position: 1299961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300381:1
position: 1300381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1303533-1303664:1:exon

position:1303533:1
position: 1303533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303664:1
position: 1303664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1308086-1308322:1:exon

position:1308086:1
position: 1308086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1308322:1
position: 1308322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1310622-1310788:1:exon

position:1310622:1
position: 1310622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Clul1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Clul1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clusterin-like protein 1
translation: MKPLLLVFVACLLCWKDLPCAPAWKERAALGGNLKGLLEAGETDADGEVKKALMGVKQMRIVMERREEEHSKLMKTLKKCKEEKQEALKLMNEVQEHLEEEERLCQVSSAKSWEQCRSCLQSKCMRLYTTCKPGWASVKSTMEQFFRRLYRFLFPLHEDQDDLPIQEKLPEEDPRVAQMEGVFCRLTEDVRILFNQSLFVFKQMQQEFDQAFQSYFMSDSDLMELPAFYKKPTSKADLGQRWDFSNFFQLLCNLGLSVYEKVSKLITSTLGAMQDPSTQHQVLPSLISEPFPEHDGAWCGEPVQNLSGCFEFHERCQMCQDYISEDCPDVPELHTELDEALKLVSLSSEQYDQIVHMTQYHVQDTLLLMERMKAQFGWVSELARQIPGAKNSSDLTKVTAQSRRKHSSKEDDTMVDSPTLPSPSFTVKMAADPSAESSNLMDYVAAKVLEHFREHFKTW
SIO_010081: Clul1
subclass of: SO_0000673
so part of: Clul1
location: join(1287991..1288096,1289288..1289436,1297506..1297673,1299961..1300381,1303533..1303664,1308086..1308322,1310622..1310788)
location: region:1287991-1310788:1
so has part: feature:1287991-1288096:1:exon
so has part: feature:1289288-1289436:1:exon
so has part: feature:1297506-1297673:1:exon
so has part: feature:1299961-1300381:1:exon
so has part: feature:1303533-1303664:1:exon
so has part: feature:1308086-1308322:1:exon
so has part: feature:1310622-1310788:1:exon

XP_048219476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1287991-1288096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1289288-1289436:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1297506-1297673:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1299961-1300381:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1303533-1303664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1308086-1308322:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1310622-1310788:1:exon

Tyms
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tyms
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1326666..1338864
location: region:1326666-1338864:1
so has part: feature:1326666-1338864:1:exon
subclass of: SO_0000010

125364159
type: Gene
SIO_000068: ncbigene

position:1326666:1
position: 1326666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1338864:1
position: 1338864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1326666-1338864:1:exon

Tyms
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tyms
product: thymidylate synthetase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363608.1
SIO_010081: Tyms
subclass of: SO_0000673
so part of: Tyms
location: join(1326666..1326864,1328347..1328420,1330545..1330719,1334394..1334495,1335820..1335995,1336345..1336416,1338340..1338864)
location: region:1326666-1338864:1
so has part: feature:1326666-1326864:1:exon
so has part: feature:1328347-1328420:1:exon
so has part: feature:1330545-1330719:1:exon
so has part: feature:1334394-1334495:1:exon
so has part: feature:1335820-1335995:1:exon
so has part: feature:1336345-1336416:1:exon
so has part: feature:1338340-1338864:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1326666-1326864:1:exon

position:1326864:1
position: 1326864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1328347-1328420:1:exon

position:1328347:1
position: 1328347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328420:1
position: 1328420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1330545-1330719:1:exon

position:1330545:1
position: 1330545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1330719:1
position: 1330719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1334394-1334495:1:exon

position:1334394:1
position: 1334394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334495:1
position: 1334495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1335820-1335995:1:exon

position:1335820:1
position: 1335820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335995:1
position: 1335995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1336345-1336416:1:exon

position:1336345:1
position: 1336345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1336416:1
position: 1336416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1338340-1338864:1:exon

position:1338340:1
position: 1338340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tyms
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tyms
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thymidylate synthase
translation: MPAAGSELPPAAPERGAEPRTHGEHQYLGQVEHILRCGFRKEDRTGTGTLSVFGLQARYNLRDEFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSARKEGDLGPVYGFQWRHFGADYKDMDSDYTGQGVDQLQKVIDTIKTNPHDRRIIMCAWNPKDLPQMALPPCHALCQFYVMNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQREPRPFPKLTILRKVETIDDFKAEDFQIEGYNPHPTIKMEMAV
SIO_010081: Tyms
subclass of: SO_0000673
so part of: Tyms
location: join(1326678..1326864,1328347..1328420,1330545..1330719,1334394..1334495,1335820..1335995,1336345..1336416,1338340..1338477)
location: region:1326678-1338477:1
so has part: feature:1326678-1326864:1:exon
so has part: feature:1328347-1328420:1:exon
so has part: feature:1330545-1330719:1:exon
so has part: feature:1334394-1334495:1:exon
so has part: feature:1335820-1335995:1:exon
so has part: feature:1336345-1336416:1:exon
so has part: feature:1338340-1338477:1:exon

XP_048219565.1
type: Protein
SIO_000068: ncbiprotein

position:1326678:1
position: 1326678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1338477:1
position: 1338477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1326678-1326864:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1328347-1328420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1330545-1330719:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1334394-1334495:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1335820-1335995:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1336345-1336416:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1338340-1338477:1:exon

Enosf1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Enosf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1340165..1373736)
location: region:1340165-1373736:-1
so has part: feature:1340165-1373736:-1:exon
subclass of: SO_0000010

125364158
type: Gene
SIO_000068: ncbigene

position:1340165:-1
position: 1340165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1373736:-1
position: 1373736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340165-1373736:-1:exon

Enosf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Enosf1
product: enolase superfamily member 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363604.1
SIO_010081: Enosf1
subclass of: SO_0000673
so part of: Enosf1
location: complement(join(1340165..1340324,1341082..1341163,1344334..1344433,1344678..1344807,1345638..1345679,1348833..1348967,1350564..1350651,1352207..1352241,1354230..1354312,1354734..1354772,1354879..1354951,1357698..1357724,1358094..1358180,1362204..1362319,1368999..1369107,1373609..1373736))
location: region:1340165-1373736:-1
so has part: feature:1373609-1373736:-1:exon
so has part: feature:1368999-1369107:-1:exon
so has part: feature:1362204-1362319:-1:exon
so has part: feature:1358094-1358180:-1:exon
so has part: feature:1357698-1357724:-1:exon
so has part: feature:1354879-1354951:-1:exon
so has part: feature:1354734-1354772:-1:exon
so has part: feature:1354230-1354312:-1:exon
so has part: feature:1352207-1352241:-1:exon
so has part: feature:1350564-1350651:-1:exon
so has part: feature:1348833-1348967:-1:exon
so has part: feature:1345638-1345679:-1:exon
so has part: feature:1344678-1344807:-1:exon
so has part: feature:1344334-1344433:-1:exon
so has part: feature:1341082-1341163:-1:exon
so has part: feature:1340165-1340324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1373609-1373736:-1:exon

position:1373609:-1
position: 1373609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1368999-1369107:-1:exon

position:1368999:-1
position: 1368999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1369107:-1
position: 1369107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1362204-1362319:-1:exon

position:1362204:-1
position: 1362204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362319:-1
position: 1362319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1358094-1358180:-1:exon

position:1358094:-1
position: 1358094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358180:-1
position: 1358180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1357698-1357724:-1:exon

position:1357698:-1
position: 1357698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357724:-1
position: 1357724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1354879-1354951:-1:exon

position:1354879:-1
position: 1354879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354951:-1
position: 1354951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1354734-1354772:-1:exon

position:1354734:-1
position: 1354734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354772:-1
position: 1354772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1354230-1354312:-1:exon

position:1354230:-1
position: 1354230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354312:-1
position: 1354312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1352207-1352241:-1:exon

position:1352207:-1
position: 1352207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1352241:-1
position: 1352241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1350564-1350651:-1:exon

position:1350564:-1
position: 1350564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350651:-1
position: 1350651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1348833-1348967:-1:exon

position:1348833:-1
position: 1348833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348967:-1
position: 1348967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1345638-1345679:-1:exon

position:1345638:-1
position: 1345638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345679:-1
position: 1345679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1344678-1344807:-1:exon

position:1344678:-1
position: 1344678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344807:-1
position: 1344807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1344334-1344433:-1:exon

position:1344334:-1
position: 1344334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344433:-1
position: 1344433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1341082-1341163:-1:exon

position:1341082:-1
position: 1341082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1341163:-1
position: 1341163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1340165-1340324:-1:exon

position:1340324:-1
position: 1340324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Enosf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Enosf1
product: enolase superfamily member 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363605.1
SIO_010081: Enosf1
subclass of: SO_0000673
so part of: Enosf1
location: complement(join(1340165..1340324,1341082..1341163,1344334..1344433,1344678..1344807,1345638..1345679,1348833..1348967,1350564..1350651,1352207..1352241,1354230..1354312,1354749..1354772,1354879..1354951,1357698..1357724,1358094..1358180,1362204..1362319,1368999..1369107,1373609..1373707))
location: region:1340165-1373707:-1
so has part: feature:1373609-1373707:-1:exon
so has part: feature:1368999-1369107:-1:exon
so has part: feature:1362204-1362319:-1:exon
so has part: feature:1358094-1358180:-1:exon
so has part: feature:1357698-1357724:-1:exon
so has part: feature:1354879-1354951:-1:exon
so has part: feature:1354749-1354772:-1:exon
so has part: feature:1354230-1354312:-1:exon
so has part: feature:1352207-1352241:-1:exon
so has part: feature:1350564-1350651:-1:exon
so has part: feature:1348833-1348967:-1:exon
so has part: feature:1345638-1345679:-1:exon
so has part: feature:1344678-1344807:-1:exon
so has part: feature:1344334-1344433:-1:exon
so has part: feature:1341082-1341163:-1:exon
so has part: feature:1340165-1340324:-1:exon

position:1373707:-1
position: 1373707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1373609-1373707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1368999-1369107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1362204-1362319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358094-1358180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357698-1357724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354879-1354951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1354749-1354772:-1:exon

position:1354749:-1
position: 1354749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1354230-1354312:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1352207-1352241:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1350564-1350651:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1348833-1348967:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1345638-1345679:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1344678-1344807:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1344334-1344433:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1341082-1341163:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1340165-1340324:-1:exon

Enosf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Enosf1
product: enolase superfamily member 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363606.1
SIO_010081: Enosf1
subclass of: SO_0000673
so part of: Enosf1
location: complement(join(1340165..1340324,1341082..1341163,1344334..1344433,1344678..1344807,1348833..1348967,1350564..1350651,1352207..1352241,1354230..1354312,1354734..1354772,1354879..1354951,1357698..1357724,1358094..1358180,1362204..1362319,1368999..1369107,1373609..1373707))
location: region:1340165-1373707:-1
so has part: feature:1373609-1373707:-1:exon
so has part: feature:1368999-1369107:-1:exon
so has part: feature:1362204-1362319:-1:exon
so has part: feature:1358094-1358180:-1:exon
so has part: feature:1357698-1357724:-1:exon
so has part: feature:1354879-1354951:-1:exon
so has part: feature:1354734-1354772:-1:exon
so has part: feature:1354230-1354312:-1:exon
so has part: feature:1352207-1352241:-1:exon
so has part: feature:1350564-1350651:-1:exon
so has part: feature:1348833-1348967:-1:exon
so has part: feature:1344678-1344807:-1:exon
so has part: feature:1344334-1344433:-1:exon
so has part: feature:1341082-1341163:-1:exon
so has part: feature:1340165-1340324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1373609-1373707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1368999-1369107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1362204-1362319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358094-1358180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357698-1357724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354879-1354951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1354734-1354772:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1354230-1354312:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1352207-1352241:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1350564-1350651:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1348833-1348967:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1344678-1344807:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1344334-1344433:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1341082-1341163:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1340165-1340324:-1:exon

Enosf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Enosf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial enolase superfamily member 1 isoform X2
translation: MVRGRISRLSVCDVRFPTSLGGHGSDAMHTDPDYSVAYVVIETDAEDGLMGCGFTFTLGKGTEVVVCAVNALTHHVLHKDLKDIVGDFRGFYRQLTSDGQLRWIGPEKGAVHLATAAILNAVWDLWAKQEGKPLWKLLVDMDPRMLVSCIDFRYITDVLTEEEAYKILQQGQVEKQMLTHGYPAYTTSCAWLGYSDATLKQLCAAALKDGWSRFKVKVGADLQDDIRRCHLIRDMIGPEKILMMDANQRWDVPEAVEWMSKLAEFKPLWIEEPTSPDDILGHATISKALAPLGIGVATGEQCHNRVIFKQLLQADALQFLQIDSCRLGSVNENLSVLLMAQKFGIPVCPHAGGVGLCELVQHLIIFDFISVSGSLENRMCEYVDHLHEHFKYPVIIRQAAYLPPKAAGYSTEMKEESVQKHQYPCGEVWKKLLPAQEN
SIO_010081: Enosf1
subclass of: SO_0000673
so part of: Enosf1
location: complement(join(1340223..1340324,1341082..1341163,1344334..1344433,1344678..1344807,1345638..1345679,1348833..1348967,1350564..1350651,1352207..1352241,1354230..1354312,1354749..1354772,1354879..1354951,1357698..1357724,1358094..1358180,1362204..1362319,1368999..1369107,1373609..1373692))
location: region:1340223-1373692:-1
so has part: feature:1373609-1373692:-1:exon
so has part: feature:1368999-1369107:-1:exon
so has part: feature:1362204-1362319:-1:exon
so has part: feature:1358094-1358180:-1:exon
so has part: feature:1357698-1357724:-1:exon
so has part: feature:1354879-1354951:-1:exon
so has part: feature:1354749-1354772:-1:exon
so has part: feature:1354230-1354312:-1:exon
so has part: feature:1352207-1352241:-1:exon
so has part: feature:1350564-1350651:-1:exon
so has part: feature:1348833-1348967:-1:exon
so has part: feature:1345638-1345679:-1:exon
so has part: feature:1344678-1344807:-1:exon
so has part: feature:1344334-1344433:-1:exon
so has part: feature:1341082-1341163:-1:exon
so has part: feature:1340223-1340324:-1:exon

XP_048219562.1
type: Protein
SIO_000068: ncbiprotein

position:1340223:-1
position: 1340223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1373692:-1
position: 1373692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1373609-1373692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1368999-1369107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1362204-1362319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358094-1358180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357698-1357724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354879-1354951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1354749-1354772:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1354230-1354312:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1352207-1352241:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1350564-1350651:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1348833-1348967:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1345638-1345679:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1344678-1344807:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1344334-1344433:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1341082-1341163:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1340223-1340324:-1:exon

Enosf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Enosf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial enolase superfamily member 1 isoform X3
translation: MVRGRISRLSVCDVRFPTSLGGHGSDAMHTDPDYSVAYVVIETDAEDGLMGCGFTFTLGKGTEVVVCAVNALTHHVLHKDLKDIVGDFRGFYRQLTSDGQLRWIGPEKGAVHLATAAILNAVWDLWAKQEGKPLWKLLVDMDPRMLVSCIDFRYITDVLTEEEAYKILQQGQVGKKEREKQMLTHGYPAYTTSCAWLGYSDATLKQLCAAALKDGWSRFKVKVGADLQDDIRRCHLIRDMIGPEKILMMDANQRWDVPEAVEWMSKLAEFKPLWIEEPTSPDDILGHATISKCHNRVIFKQLLQADALQFLQIDSCRLGSVNENLSVLLMAQKFGIPVCPHAGGVGLCELVQHLIIFDFISVSGSLENRMCEYVDHLHEHFKYPVIIRQAAYLPPKAAGYSTEMKEESVQKHQYPCGEVWKKLLPAQEN
SIO_010081: Enosf1
subclass of: SO_0000673
so part of: Enosf1
location: complement(join(1340223..1340324,1341082..1341163,1344334..1344433,1344678..1344807,1348833..1348967,1350564..1350651,1352207..1352241,1354230..1354312,1354734..1354772,1354879..1354951,1357698..1357724,1358094..1358180,1362204..1362319,1368999..1369107,1373609..1373692))
location: region:1340223-1373692:-1
so has part: feature:1373609-1373692:-1:exon
so has part: feature:1368999-1369107:-1:exon
so has part: feature:1362204-1362319:-1:exon
so has part: feature:1358094-1358180:-1:exon
so has part: feature:1357698-1357724:-1:exon
so has part: feature:1354879-1354951:-1:exon
so has part: feature:1354734-1354772:-1:exon
so has part: feature:1354230-1354312:-1:exon
so has part: feature:1352207-1352241:-1:exon
so has part: feature:1350564-1350651:-1:exon
so has part: feature:1348833-1348967:-1:exon
so has part: feature:1344678-1344807:-1:exon
so has part: feature:1344334-1344433:-1:exon
so has part: feature:1341082-1341163:-1:exon
so has part: feature:1340223-1340324:-1:exon

XP_048219563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1373609-1373692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1368999-1369107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1362204-1362319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358094-1358180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357698-1357724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354879-1354951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1354734-1354772:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1354230-1354312:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1352207-1352241:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1350564-1350651:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1348833-1348967:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1344678-1344807:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1344334-1344433:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1341082-1341163:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1340223-1340324:-1:exon

Enosf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Enosf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial enolase superfamily member 1 isoform X1
translation: MVRGRISRLSVCDVRFPTSLGGHGSDAMHTDPDYSVAYVVIETDAEDGLMGCGFTFTLGKGTEVVVCAVNALTHHVLHKDLKDIVGDFRGFYRQLTSDGQLRWIGPEKGAVHLATAAILNAVWDLWAKQEGKPLWKLLVDMDPRMLVSCIDFRYITDVLTEEEAYKILQQGQVGKKEREKQMLTHGYPAYTTSCAWLGYSDATLKQLCAAALKDGWSRFKVKVGADLQDDIRRCHLIRDMIGPEKILMMDANQRWDVPEAVEWMSKLAEFKPLWIEEPTSPDDILGHATISKALAPLGIGVATGEQCHNRVIFKQLLQADALQFLQIDSCRLGSVNENLSVLLMAQKFGIPVCPHAGGVGLCELVQHLIIFDFISVSGSLENRMCEYVDHLHEHFKYPVIIRQAAYLPPKAAGYSTEMKEESVQKHQYPCGEVWKKLLPAQEN
SIO_010081: Enosf1
subclass of: SO_0000673
so part of: Enosf1
location: complement(join(1340223..1340324,1341082..1341163,1344334..1344433,1344678..1344807,1345638..1345679,1348833..1348967,1350564..1350651,1352207..1352241,1354230..1354312,1354734..1354772,1354879..1354951,1357698..1357724,1358094..1358180,1362204..1362319,1368999..1369107,1373609..1373692))
location: region:1340223-1373692:-1
so has part: feature:1373609-1373692:-1:exon
so has part: feature:1368999-1369107:-1:exon
so has part: feature:1362204-1362319:-1:exon
so has part: feature:1358094-1358180:-1:exon
so has part: feature:1357698-1357724:-1:exon
so has part: feature:1354879-1354951:-1:exon
so has part: feature:1354734-1354772:-1:exon
so has part: feature:1354230-1354312:-1:exon
so has part: feature:1352207-1352241:-1:exon
so has part: feature:1350564-1350651:-1:exon
so has part: feature:1348833-1348967:-1:exon
so has part: feature:1345638-1345679:-1:exon
so has part: feature:1344678-1344807:-1:exon
so has part: feature:1344334-1344433:-1:exon
so has part: feature:1341082-1341163:-1:exon
so has part: feature:1340223-1340324:-1:exon

XP_048219561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1373609-1373692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1368999-1369107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1362204-1362319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358094-1358180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357698-1357724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354879-1354951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1354734-1354772:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1354230-1354312:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1352207-1352241:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1350564-1350651:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1348833-1348967:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1345638-1345679:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1344678-1344807:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1344334-1344433:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1341082-1341163:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1340223-1340324:-1:exon

Yes1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Yes1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1386581..1466531)
location: region:1386581-1466531:-1
so has part: feature:1386581-1466531:-1:exon
subclass of: SO_0000010

125364157
type: Gene
SIO_000068: ncbigene

position:1386581:-1
position: 1386581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1466531:-1
position: 1466531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386581-1466531:-1:exon

Yes1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Yes1
product: YES proto-oncogene 1, Src family tyrosine kinase, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363603.1
SIO_010081: Yes1
subclass of: SO_0000673
so part of: Yes1
location: complement(join(1386581..1389053,1392366..1392497,1395875..1396028,1398393..1398469,1401110..1401289,1401405..1401560,1403045..1403194,1403288..1403391,1404623..1404721,1409421..1409520,1411414..1411683,1466361..1466531))
location: region:1386581-1466531:-1
so has part: feature:1466361-1466531:-1:exon
so has part: feature:1411414-1411683:-1:exon
so has part: feature:1409421-1409520:-1:exon
so has part: feature:1404623-1404721:-1:exon
so has part: feature:1403288-1403391:-1:exon
so has part: feature:1403045-1403194:-1:exon
so has part: feature:1401405-1401560:-1:exon
so has part: feature:1401110-1401289:-1:exon
so has part: feature:1398393-1398469:-1:exon
so has part: feature:1395875-1396028:-1:exon
so has part: feature:1392366-1392497:-1:exon
so has part: feature:1386581-1389053:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1466361-1466531:-1:exon

position:1466361:-1
position: 1466361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1411414-1411683:-1:exon

position:1411414:-1
position: 1411414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1411683:-1
position: 1411683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1409421-1409520:-1:exon

position:1409421:-1
position: 1409421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409520:-1
position: 1409520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1404623-1404721:-1:exon

position:1404623:-1
position: 1404623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404721:-1
position: 1404721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1403288-1403391:-1:exon

position:1403288:-1
position: 1403288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1403391:-1
position: 1403391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1403045-1403194:-1:exon

position:1403045:-1
position: 1403045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1403194:-1
position: 1403194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1401405-1401560:-1:exon

position:1401405:-1
position: 1401405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1401560:-1
position: 1401560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1401110-1401289:-1:exon

position:1401110:-1
position: 1401110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1401289:-1
position: 1401289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1398393-1398469:-1:exon

position:1398393:-1
position: 1398393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398469:-1
position: 1398469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1395875-1396028:-1:exon

position:1395875:-1
position: 1395875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1396028:-1
position: 1396028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1392366-1392497:-1:exon

position:1392366:-1
position: 1392366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392497:-1
position: 1392497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1386581-1389053:-1:exon

position:1389053:-1
position: 1389053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Yes1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Yes1
product: YES proto-oncogene 1, Src family tyrosine kinase, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363602.1
SIO_010081: Yes1
subclass of: SO_0000673
so part of: Yes1
location: complement(join(1386581..1389053,1392366..1392497,1395875..1396028,1398393..1398469,1401110..1401289,1401405..1401560,1403045..1403194,1403288..1403391,1404623..1404721,1409421..1409520,1411414..1411683,1466031..1466209))
location: region:1386581-1466209:-1
so has part: feature:1466031-1466209:-1:exon
so has part: feature:1411414-1411683:-1:exon
so has part: feature:1409421-1409520:-1:exon
so has part: feature:1404623-1404721:-1:exon
so has part: feature:1403288-1403391:-1:exon
so has part: feature:1403045-1403194:-1:exon
so has part: feature:1401405-1401560:-1:exon
so has part: feature:1401110-1401289:-1:exon
so has part: feature:1398393-1398469:-1:exon
so has part: feature:1395875-1396028:-1:exon
so has part: feature:1392366-1392497:-1:exon
so has part: feature:1386581-1389053:-1:exon

position:1466209:-1
position: 1466209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466031-1466209:-1:exon

position:1466031:-1
position: 1466031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1411414-1411683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1409421-1409520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1404623-1404721:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1403288-1403391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1403045-1403194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1401405-1401560:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1401110-1401289:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1398393-1398469:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1395875-1396028:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1392366-1392497:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1386581-1389053:-1:exon

Yes1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Yes1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Yes
translation: MGCIKSKENKTPAIKYTVENPPEPVSTSVSHYVADHTTVTPSAAKGASVNFSNLSITPFGGSSAVTPFGGASSSFSVVPSSYPTGLTGGVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKNGYIPSNYVAPADSIQAEEWYFGKMGRKDAERLLLNPGNQRGIFLVRESETTKGAYSLSIRDWDEVRGDNVKHYKIRKLDNGGYYITTRAQFDTLQKLVKHYTEHADGLCHKLTTVCPTVKPQTQGLARDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGENLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMNLCWKKDPDERPTFDYIQSFLEDYFTATEPQYQPGENL
SIO_010081: Yes1
subclass of: SO_0000673
so part of: Yes1
location: complement(join(1388845..1389053,1392366..1392497,1395875..1396028,1398393..1398469,1401110..1401289,1401405..1401560,1403045..1403194,1403288..1403391,1404623..1404721,1409421..1409520,1411414..1411675))
location: region:1388845-1411675:-1
so has part: feature:1411414-1411675:-1:exon
so has part: feature:1409421-1409520:-1:exon
so has part: feature:1404623-1404721:-1:exon
so has part: feature:1403288-1403391:-1:exon
so has part: feature:1403045-1403194:-1:exon
so has part: feature:1401405-1401560:-1:exon
so has part: feature:1401110-1401289:-1:exon
so has part: feature:1398393-1398469:-1:exon
so has part: feature:1395875-1396028:-1:exon
so has part: feature:1392366-1392497:-1:exon
so has part: feature:1388845-1389053:-1:exon

XP_048219559.1
type: Protein
SIO_000068: ncbiprotein

position:1388845:-1
position: 1388845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1411675:-1
position: 1411675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1411414-1411675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1409421-1409520:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1404623-1404721:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1403288-1403391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1403045-1403194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1401405-1401560:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1401110-1401289:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1398393-1398469:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1395875-1396028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1392366-1392497:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1388845-1389053:-1:exon

Yes1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Yes1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Yes
translation: MGCIKSKENKTPAIKYTVENPPEPVSTSVSHYVADHTTVTPSAAKGASVNFSNLSITPFGGSSAVTPFGGASSSFSVVPSSYPTGLTGGVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKNGYIPSNYVAPADSIQAEEWYFGKMGRKDAERLLLNPGNQRGIFLVRESETTKGAYSLSIRDWDEVRGDNVKHYKIRKLDNGGYYITTRAQFDTLQKLVKHYTEHADGLCHKLTTVCPTVKPQTQGLARDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGENLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMNLCWKKDPDERPTFDYIQSFLEDYFTATEPQYQPGENL
SIO_010081: Yes1
subclass of: SO_0000673
so part of: Yes1
location: complement(join(1388845..1389053,1392366..1392497,1395875..1396028,1398393..1398469,1401110..1401289,1401405..1401560,1403045..1403194,1403288..1403391,1404623..1404721,1409421..1409520,1411414..1411675))
location: region:1388845-1411675:-1
so has part: feature:1411414-1411675:-1:exon
so has part: feature:1409421-1409520:-1:exon
so has part: feature:1404623-1404721:-1:exon
so has part: feature:1403288-1403391:-1:exon
so has part: feature:1403045-1403194:-1:exon
so has part: feature:1401405-1401560:-1:exon
so has part: feature:1401110-1401289:-1:exon
so has part: feature:1398393-1398469:-1:exon
so has part: feature:1395875-1396028:-1:exon
so has part: feature:1392366-1392497:-1:exon
so has part: feature:1388845-1389053:-1:exon

XP_048219560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1411414-1411675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1409421-1409520:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1404623-1404721:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1403288-1403391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1403045-1403194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1401405-1401560:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1401110-1401289:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1398393-1398469:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1395875-1396028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1392366-1392497:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1388845-1389053:-1:exon

LOC125364160
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1433531..1434205
location: region:1433531-1434205:1
so has part: feature:1433531-1434205:1:exon
subclass of: SO_0000010

125364160
type: Gene
SIO_000068: ncbigene

position:1433531:1
position: 1433531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434205:1
position: 1434205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433531-1434205:1:exon

LOC125364160
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125364160
product: BET1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048363609.1
SIO_010081: LOC125364160
subclass of: SO_0000673
so part of: LOC125364160
location: 1433531..1434205
location: region:1433531-1434205:1
so has part: feature:1433531-1434205:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1433531-1434205:1:exon

LOC125364160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125364160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BET1 homolog
translation: MRHAGLGEGAPLGNYGSYGYANSGYSACEEENERLTESLRKKVTAIKSLSIEIGHEVKNQNKLLAEMDSQFDSTTGYLGKTMEKLKILSKGSQTKLLCYMMLFSLFVFFVIYWIIKLR
SIO_010081: LOC125364160
subclass of: SO_0000673
so part of: LOC125364160
location: 1433645..1434001
location: region:1433645-1434001:1
so has part: feature:1433645-1434001:1:exon

XP_048219566.1
type: Protein
SIO_000068: ncbiprotein

position:1433645:1
position: 1433645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434001:1
position: 1434001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433645-1434001:1:exon

LOC125364342
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364342
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 1498399..1498548
location: region:1498399-1498548:1
so has part: feature:1498399-1498548:1:exon

125364342
type: Gene
SIO_000068: ncbigene

position:1498399:1
position: 1498399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498548:1
position: 1498548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1498399-1498548:1:exon

LOC125364342
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125364342
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC125364342
subclass of: SO_0000673
so part of: LOC125364342
location: 1498399..1498548
location: region:1498399-1498548:1
so has part: feature:1498399-1498548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1498399-1498548:1:exon

LOC125364122
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364122
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1505033..1507364)
location: region:1505033-1507364:-1
so has part: feature:1505033-1507364:-1:exon

125364122
type: Gene
SIO_000068: ncbigene

position:1505033:-1
position: 1505033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1507364:-1
position: 1507364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1505033-1507364:-1:exon

LOC125364122
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125364122
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC125364122
subclass of: SO_0000673
so part of: LOC125364122
location: complement(1505033..1506833)
location: region:1505033-1506833:-1
so has part: feature:1505033-1506833:-1:exon

position:1506833:-1
position: 1506833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1505033-1506833:-1:exon

LOC125364122
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125364122
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC125364122
subclass of: SO_0000673
so part of: LOC125364122
location: complement(1507050..1507364)
location: region:1507050-1507364:-1
so has part: feature:1507050-1507364:-1:exon

position:1507050:-1
position: 1507050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1507050-1507364:-1:exon

Adcyap1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Adcyap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1537408..1543913
location: region:1537408-1543913:1
so has part: feature:1537408-1543913:1:exon
subclass of: SO_0000010

125364177
type: Gene
SIO_000068: ncbigene

position:1537408:1
position: 1537408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1543913:1
position: 1543913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1537408-1543913:1:exon

Adcyap1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Adcyap1
product: adenylate cyclase activating polypeptide 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048363638.1
SIO_010081: Adcyap1
subclass of: SO_0000673
so part of: Adcyap1
location: join(1537408..1539178,1539483..1539593,1541742..1541873,1542328..1542426,1543522..1543913)
location: region:1537408-1543913:1
so has part: feature:1537408-1539178:1:exon
so has part: feature:1539483-1539593:1:exon
so has part: feature:1541742-1541873:1:exon
so has part: feature:1542328-1542426:1:exon
so has part: feature:1543522-1543913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1537408-1539178:1:exon

position:1539178:1
position: 1539178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1539483-1539593:1:exon

position:1539483:1
position: 1539483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1539593:1
position: 1539593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1541742-1541873:1:exon

position:1541742:1
position: 1541742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1541873:1
position: 1541873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1542328-1542426:1:exon

position:1542328:1
position: 1542328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1542426:1
position: 1542426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1543522-1543913:1:exon

position:1543522:1
position: 1543522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Adcyap1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Adcyap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pituitary adenylate cyclase-activating polypeptide
translation: MTMCSGARLALLVYGIIMHSSVYCSPAAAGLRFPGIRPEDEAYDEDGSPLLHWNDAEPPGAGSPASALHEAYAQLHPAGRRDVAHGILNQAYRKVLDQLSARKYLQSLVAPGVGGSLGGGALDDAEPLSKRHSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQRVKNKGRRIPYL
SIO_010081: Adcyap1
subclass of: SO_0000673
so part of: Adcyap1
location: join(1539484..1539593,1541742..1541873,1542328..1542426,1543522..1543711)
location: region:1539484-1543711:1
so has part: feature:1539484-1539593:1:exon
so has part: feature:1541742-1541873:1:exon
so has part: feature:1542328-1542426:1:exon
so has part: feature:1543522-1543711:1:exon

XP_048219595.1
type: Protein
SIO_000068: ncbiprotein

position:1539484:1
position: 1539484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1543711:1
position: 1543711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1539484-1539593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1541742-1541873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1542328-1542426:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1543522-1543711:1:exon

LOC125363878
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125363878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1736190..1737143)
location: region:1736190-1737143:-1
so has part: feature:1736190-1737143:-1:exon
subclass of: SO_0000010

125363878
type: Gene
SIO_000068: ncbigene

position:1736190:-1
position: 1736190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1737143:-1
position: 1737143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1736190-1737143:-1:exon

LOC125363878
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125363878
product: coiled-coil domain-containing protein 90B, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048363204.1
SIO_010081: LOC125363878
subclass of: SO_0000673
so part of: LOC125363878
location: complement(1736190..1737143)
location: region:1736190-1737143:-1
so has part: feature:1736190-1737143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1736190-1737143:-1:exon

LOC125363878
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125363878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 90B, mitochondrial
translation: MITQAQQEITVQQLMAHLDSIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMDETSRIRADNKLDINLERSQVTDMFTDQEKQLMEATTEFTKTDTHIKSIISETSNKIDTEIASLKPLMESNKLETIRYLAASMFTCLAIALGVYRFWKDS
SIO_010081: LOC125363878
subclass of: SO_0000673
so part of: LOC125363878
location: complement(1736585..1737052)
location: region:1736585-1737052:-1
so has part: feature:1736585-1737052:-1:exon

XP_048219161.1
type: Protein
SIO_000068: ncbiprotein

position:1736585:-1
position: 1736585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1737052:-1
position: 1737052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1736585-1737052:-1:exon

LOC125363988
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125363988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1781420..1781912)
location: region:1781420-1781912:-1
so has part: feature:1781420-1781912:-1:exon
subclass of: SO_0000010

125363988
type: Gene
SIO_000068: ncbigene

position:1781420:-1
position: 1781420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1781912:-1
position: 1781912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1781420-1781912:-1:exon

LOC125363988
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125363988
product: 60S ribosomal protein L26-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363356.1
SIO_010081: LOC125363988
subclass of: SO_0000673
so part of: LOC125363988
location: complement(1781420..1781912)
location: region:1781420-1781912:-1
so has part: feature:1781420-1781912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1781420-1781912:-1:exon

LOC125363988
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125363988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L26-like
translation: MKFNPFVTSDRSKNQKRHFNAPSHIHRKTMSSPLSKELRQKYNVRSMPIRKDDEVQVVWGHYKGQQIGKVVQVYRKKYVIYIEQVQWEKANGTTVHVGIHPSKVVITRLKLDKDCKKILERKAKSRQVGKEKGKYKEETIETMQE
SIO_010081: LOC125363988
subclass of: SO_0000673
so part of: LOC125363988
location: complement(1781455..1781892)
location: region:1781455-1781892:-1
so has part: feature:1781455-1781892:-1:exon

XP_048219313.1
type: Protein
SIO_000068: ncbiprotein

position:1781455:-1
position: 1781455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1781892:-1
position: 1781892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1781455-1781892:-1:exon

LOC125364356
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364356
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1919282..1919405)
location: region:1919282-1919405:-1
so has part: feature:1919282-1919405:-1:exon
subclass of: SO_0000578

125364356
type: Gene
SIO_000068: ncbigene

position:1919282:-1
position: 1919282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1919405:-1
position: 1919405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1919282-1919405:-1:exon

LOC125364356
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snoRNA
gene: LOC125364356
product: small nucleolar RNA SNORA40
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00561
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007213509.1
SIO_010081: LOC125364356
subclass of: SO_0000673
so part of: LOC125364356
location: complement(1919282..1919405)
location: region:1919282-1919405:-1
so has part: feature:1919282-1919405:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1919282-1919405:-1:exon

LOC125364319
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364319
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2050355..2050461
location: region:2050355-2050461:1
so has part: feature:2050355-2050461:1:exon
subclass of: SO_0000623

125364319
type: Gene
SIO_000068: ncbigene

position:2050355:1
position: 2050355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2050461:1
position: 2050461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2050355-2050461:1:exon

LOC125364319
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snRNA
gene: LOC125364319
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007213479.1
SIO_010081: LOC125364319
subclass of: SO_0000673
so part of: LOC125364319
location: 2050355..2050461
location: region:2050355-2050461:1
so has part: feature:2050355-2050461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2050355-2050461:1:exon

LOC125364245
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2830042..2831301
location: region:2830042-2831301:1
so has part: feature:2830042-2831301:1:exon
subclass of: SO_0000010

125364245
type: Gene
SIO_000068: ncbigene

position:2830042:1
position: 2830042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2831301:1
position: 2831301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2830042-2831301:1:exon

LOC125364245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125364245
product: T-complex protein 1 subunit theta-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_048363731.1
SIO_010081: LOC125364245
subclass of: SO_0000673
so part of: LOC125364245
location: 2830042..2831301
location: region:2830042-2831301:1
so has part: feature:2830042-2831301:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2830042-2831301:1:exon

LOC125364245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125364245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 1 subunit theta-like
translation: MASHMQEQEVEDGTNFVLVFAGALLKLVEDLVRIGLSVSKVIEGYEIACRKAHKILPNLVCCSAKNLWDADEVSSLLLTSIMSKQYGKEAFLAKLIAQACVSIFPDSGNFNVDNIRVCKLLGPGIYSSSVLHGMVFRKETEGDVTSVKDAKIAVYSCPFDGMITETKGTVLIKTAEKLMSFSKGEENLMDAQVKAIANTGANVMVTGGKVADMALHYRNKYNIMLVRLNSKWDLRRLYKTVGATAPPRLTPPVLEEMGHCDSVYLSEVGDTQVVVFKHEEEDGAISTLILRGSTDNLMDDIEKAVDDGVNTFEFLTRINVLYLEGKQQKLNWPKKKITSYGETCPALEQYAITKFAEEFEAIPRALAENSGVKANEVISKLYTLHQEGNKNVGIDIEADVKRHVGSWYLRYLPGKILGY
SIO_010081: LOC125364245
subclass of: SO_0000673
so part of: LOC125364245
location: 2830042..2831301
location: region:2830042-2831301:1
so has part: feature:2830042-2831301:1:exon

XP_048219688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2830042-2831301:1:exon

LOC125363965
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125363965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2940284..2940814
location: region:2940284-2940814:1
so has part: feature:2940284-2940814:1:exon

125363965
type: Gene
SIO_000068: ncbigene

position:2940284:1
position: 2940284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2940814:1
position: 2940814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2940284-2940814:1:exon

LOC125363965
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125363965
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125363965
subclass of: SO_0000673
so part of: LOC125363965
location: 2940284..2940814
location: region:2940284-2940814:1
so has part: feature:2940284-2940814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2940284-2940814:1:exon

LOC125363964
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125363964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2951624..2952305
location: region:2951624-2952305:1
so has part: feature:2951624-2952305:1:exon

125363964
type: Gene
SIO_000068: ncbigene

position:2951624:1
position: 2951624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2952305:1
position: 2952305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2951624-2952305:1:exon

LOC125363964
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125363964
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125363964
subclass of: SO_0000673
so part of: LOC125363964
location: 2951624..2952305
location: region:2951624-2952305:1
so has part: feature:2951624-2952305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2951624-2952305:1:exon

LOC125364215
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3024315..3040819
location: region:3024315-3040819:1
so has part: feature:3024315-3040819:1:exon

125364215
type: Gene
SIO_000068: ncbigene

position:3024315:1
position: 3024315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3040819:1
position: 3040819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3024315-3040819:1:exon

LOC125364215
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125364215
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC125364215
subclass of: SO_0000673
so part of: LOC125364215
location: 3024315..3024569
location: region:3024315-3024569:1
so has part: feature:3024315-3024569:1:exon

position:3024569:1
position: 3024569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3024315-3024569:1:exon

LOC125364215
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125364215
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC125364215
subclass of: SO_0000673
so part of: LOC125364215
location: 3025851..3026012
location: region:3025851-3026012:1
so has part: feature:3025851-3026012:1:exon

position:3025851:1
position: 3025851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3026012:1
position: 3026012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3025851-3026012:1:exon

LOC125364216
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364216
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3026157..3034068)
location: region:3026157-3034068:-1
so has part: feature:3026157-3034068:-1:exon
subclass of: SO_0000011

125364216
type: Gene
SIO_000068: ncbigene

position:3026157:-1
position: 3026157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3034068:-1
position: 3034068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3026157-3034068:-1:exon

LOC125364216
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125364216
product: uncharacterized LOC125364216
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_007213444.1
SIO_010081: LOC125364216
subclass of: SO_0000673
so part of: LOC125364216
location: complement(join(3026157..3026275,3026850..3026855,3034019..3034068))
location: region:3026157-3034068:-1
so has part: feature:3034019-3034068:-1:exon
so has part: feature:3026850-3026855:-1:exon
so has part: feature:3026157-3026275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3034019-3034068:-1:exon

position:3034019:-1
position: 3034019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3026850-3026855:-1:exon

position:3026850:-1
position: 3026850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3026855:-1
position: 3026855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3026157-3026275:-1:exon

position:3026275:-1
position: 3026275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125364211
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364211
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3038459..3039144
location: region:3038459-3039144:1
so has part: feature:3038459-3039144:1:exon

125364211
type: Gene
SIO_000068: ncbigene

position:3038459:1
position: 3038459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3039144:1
position: 3039144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3038459-3039144:1:exon

LOC125364211
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 214514
gene: LOC125364211
product: bax inhibitor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 15 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_007213443.1
SIO_010081: LOC125364211
so part of: LOC125364211
location: 3038459..3039144
location: region:3038459-3039144:1
so has part: feature:3038459-3039144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3038459-3039144:1:exon

LOC125364215
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125364215
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC125364215
subclass of: SO_0000673
so part of: LOC125364215
location: 3040781..3040819
location: region:3040781-3040819:1
so has part: feature:3040781-3040819:1:exon

position:3040781:1
position: 3040781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3040781-3040819:1:exon

Mettl4
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Mettl4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3083751..3118064)
location: region:3083751-3118064:-1
so has part: feature:3083751-3118064:-1:exon
subclass of: SO_0000010

125364210
type: Gene
SIO_000068: ncbigene

position:3083751:-1
position: 3083751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3118064:-1
position: 3118064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3083751-3118064:-1:exon

Mettl4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Mettl4
product: methyltransferase 4, N6-adenosine, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048363679.1
SIO_010081: Mettl4
subclass of: SO_0000673
so part of: Mettl4
location: complement(join(3083751..3084294,3092200..3092291,3092674..3092780,3095368..3095542,3109591..3109660,3110436..3110481,3112406..3112468,3114578..3115374,3117777..3118064))
location: region:3083751-3118064:-1
so has part: feature:3117777-3118064:-1:exon
so has part: feature:3114578-3115374:-1:exon
so has part: feature:3112406-3112468:-1:exon
so has part: feature:3110436-3110481:-1:exon
so has part: feature:3109591-3109660:-1:exon
so has part: feature:3095368-3095542:-1:exon
so has part: feature:3092674-3092780:-1:exon
so has part: feature:3092200-3092291:-1:exon
so has part: feature:3083751-3084294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3117777-3118064:-1:exon

position:3117777:-1
position: 3117777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3114578-3115374:-1:exon

position:3114578:-1
position: 3114578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3115374:-1
position: 3115374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3112406-3112468:-1:exon

position:3112406:-1
position: 3112406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3112468:-1
position: 3112468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3110436-3110481:-1:exon

position:3110436:-1
position: 3110436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3110481:-1
position: 3110481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3109591-3109660:-1:exon

position:3109591:-1
position: 3109591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3109660:-1
position: 3109660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3095368-3095542:-1:exon

position:3095368:-1
position: 3095368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3095542:-1
position: 3095542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3092674-3092780:-1:exon

position:3092674:-1
position: 3092674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3092780:-1
position: 3092780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3092200-3092291:-1:exon

position:3092200:-1
position: 3092200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3092291:-1
position: 3092291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3083751-3084294:-1:exon

position:3084294:-1
position: 3084294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mettl4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Mettl4
product: methyltransferase 4, N6-adenosine, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048363678.1
SIO_010081: Mettl4
subclass of: SO_0000673
so part of: Mettl4
location: complement(join(3083751..3084294,3092200..3092291,3092674..3092780,3095368..3095542,3109591..3109660,3110382..3110481,3112406..3112468,3114578..3115374,3117777..3118064))
location: region:3083751-3118064:-1
so has part: feature:3117777-3118064:-1:exon
so has part: feature:3114578-3115374:-1:exon
so has part: feature:3112406-3112468:-1:exon
so has part: feature:3110382-3110481:-1:exon
so has part: feature:3109591-3109660:-1:exon
so has part: feature:3095368-3095542:-1:exon
so has part: feature:3092674-3092780:-1:exon
so has part: feature:3092200-3092291:-1:exon
so has part: feature:3083751-3084294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3117777-3118064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3114578-3115374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3112406-3112468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3110382-3110481:-1:exon

position:3110382:-1
position: 3110382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3109591-3109660:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3095368-3095542:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3092674-3092780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3092200-3092291:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3083751-3084294:-1:exon

Mettl4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Mettl4
product: methyltransferase 4, N6-adenosine, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048363675.1
SIO_010081: Mettl4
subclass of: SO_0000673
so part of: Mettl4
location: complement(join(3083751..3084294,3092200..3092291,3092674..3092780,3095368..3095542,3109591..3109660,3110109..3110481,3112406..3112468,3114578..3115374,3117777..3118064))
location: region:3083751-3118064:-1
so has part: feature:3117777-3118064:-1:exon
so has part: feature:3114578-3115374:-1:exon
so has part: feature:3112406-3112468:-1:exon
so has part: feature:3110109-3110481:-1:exon
so has part: feature:3109591-3109660:-1:exon
so has part: feature:3095368-3095542:-1:exon
so has part: feature:3092674-3092780:-1:exon
so has part: feature:3092200-3092291:-1:exon
so has part: feature:3083751-3084294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3117777-3118064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3114578-3115374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3112406-3112468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3110109-3110481:-1:exon

position:3110109:-1
position: 3110109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3109591-3109660:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3095368-3095542:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3092674-3092780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3092200-3092291:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3083751-3084294:-1:exon

Mettl4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Mettl4
product: methyltransferase 4, N6-adenosine, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048363677.1
SIO_010081: Mettl4
subclass of: SO_0000673
so part of: Mettl4
location: complement(join(3083751..3084294,3092200..3092291,3092674..3092780,3095368..3095542,3109591..3109660,3110109..3110481,3112406..3112468,3114578..3115374,3117262..3117345))
location: region:3083751-3117345:-1
so has part: feature:3117262-3117345:-1:exon
so has part: feature:3114578-3115374:-1:exon
so has part: feature:3112406-3112468:-1:exon
so has part: feature:3110109-3110481:-1:exon
so has part: feature:3109591-3109660:-1:exon
so has part: feature:3095368-3095542:-1:exon
so has part: feature:3092674-3092780:-1:exon
so has part: feature:3092200-3092291:-1:exon
so has part: feature:3083751-3084294:-1:exon

position:3117345:-1
position: 3117345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3117262-3117345:-1:exon

position:3117262:-1
position: 3117262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3114578-3115374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3112406-3112468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3110109-3110481:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109591-3109660:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3095368-3095542:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3092674-3092780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3092200-3092291:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3083751-3084294:-1:exon

Mettl4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Mettl4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N(6)-adenine-specific methyltransferase METTL4 isoform X3
translation: MSVVHQLSSGWLLDHLSFINKINYQCHQHHKPHCSKNKPPSFVNFDSLQMDSLSCFGASAPCTALDSTTKPENEDGGNCEVFTEKYVFRTELFNVTKPYITAPVHKKHQQSNEEESLMNGVKTEISISVVGKKRKRCVPFNHGELDAMEYHRKIRELLLDGSLQLIQEGRKKFDVIVIDPPWQNKSVKRSNRYSYLSSLQIKQIPIPELAAPNCLVVTWVTNRQKHLRFVKEELYPSWSVEMLAEWHWVKITNSGQFVFPLDSPHKKPYEGLMLGRVQEKAALPLRNPDVNVPPLPDHKLIVSVPCILHSHKPPLAEVLKDYIKPDGECLELFARNLQPGWTSWGNEVLKFQHVDYFIALESGH
SIO_010081: Mettl4
subclass of: SO_0000673
so part of: Mettl4
location: complement(join(3084149..3084294,3092200..3092291,3092674..3092780,3095368..3095542,3109591..3109660,3110436..3110481,3112406..3112468,3114578..3114973))
location: region:3084149-3114973:-1
so has part: feature:3114578-3114973:-1:exon
so has part: feature:3112406-3112468:-1:exon
so has part: feature:3110436-3110481:-1:exon
so has part: feature:3109591-3109660:-1:exon
so has part: feature:3095368-3095542:-1:exon
so has part: feature:3092674-3092780:-1:exon
so has part: feature:3092200-3092291:-1:exon
so has part: feature:3084149-3084294:-1:exon

XP_048219636.1
type: Protein
SIO_000068: ncbiprotein

position:3084149:-1
position: 3084149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3114973:-1
position: 3114973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3114578-3114973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3112406-3112468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3110436-3110481:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3109591-3109660:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3095368-3095542:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3092674-3092780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3092200-3092291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3084149-3084294:-1:exon

Mettl4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Mettl4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N(6)-adenine-specific methyltransferase METTL4 isoform X2
translation: MSVVHQLSSGWLLDHLSFINKINYQCHQHHKPHCSKNKPPSFVNFDSLQMDSLSCFGASAPCTALDSTTKPENEDGGNCEVFTEKYVFRTELFNVTKPYITAPVHKKHQQSNEEESLMNGVKTEISISVVGKKRKRCVPFNHGELDAMEYHRKIRELLLDGSLQLIQEGVRSGFLYSLVENRDKCSGRKKFDVIVIDPPWQNKSVKRSNRYSYLSSLQIKQIPIPELAAPNCLVVTWVTNRQKHLRFVKEELYPSWSVEMLAEWHWVKITNSGQFVFPLDSPHKKPYEGLMLGRVQEKAALPLRNPDVNVPPLPDHKLIVSVPCILHSHKPPLAEVLKDYIKPDGECLELFARNLQPGWTSWGNEVLKFQHVDYFIALESGH
SIO_010081: Mettl4
subclass of: SO_0000673
so part of: Mettl4
location: complement(join(3084149..3084294,3092200..3092291,3092674..3092780,3095368..3095542,3109591..3109660,3110382..3110481,3112406..3112468,3114578..3114973))
location: region:3084149-3114973:-1
so has part: feature:3114578-3114973:-1:exon
so has part: feature:3112406-3112468:-1:exon
so has part: feature:3110382-3110481:-1:exon
so has part: feature:3109591-3109660:-1:exon
so has part: feature:3095368-3095542:-1:exon
so has part: feature:3092674-3092780:-1:exon
so has part: feature:3092200-3092291:-1:exon
so has part: feature:3084149-3084294:-1:exon

XP_048219635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3114578-3114973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3112406-3112468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3110382-3110481:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3109591-3109660:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3095368-3095542:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3092674-3092780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3092200-3092291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3084149-3084294:-1:exon

Mettl4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Mettl4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N(6)-adenine-specific methyltransferase METTL4 isoform X1
translation: MSVVHQLSSGWLLDHLSFINKINYQCHQHHKPHCSKNKPPSFVNFDSLQMDSLSCFGASAPCTALDSTTKPENEDGGNCEVFTEKYVFRTELFNVTKPYITAPVHKKHQQSNEEESLMNGVKTEISISVVGKKRKRCVPFNHGELDAMEYHRKIRELLLDGSLQLIQEGVRSGFLYSLVENRDKCSGEPIILPLETCSLSELCEMAKHLPSLNNMELQTLQLMEDDTSVTEQDLFSRVVENKSSFSKMITLMGQKYLLPPKSSFLLSDISCMQPLLNCRKKFDVIVIDPPWQNKSVKRSNRYSYLSSLQIKQIPIPELAAPNCLVVTWVTNRQKHLRFVKEELYPSWSVEMLAEWHWVKITNSGQFVFPLDSPHKKPYEGLMLGRVQEKAALPLRNPDVNVPPLPDHKLIVSVPCILHSHKPPLAEVLKDYIKPDGECLELFARNLQPGWTSWGNEVLKFQHVDYFIALESGH
SIO_010081: Mettl4
subclass of: SO_0000673
so part of: Mettl4
location: complement(join(3084149..3084294,3092200..3092291,3092674..3092780,3095368..3095542,3109591..3109660,3110109..3110481,3112406..3112468,3114578..3114973))
location: region:3084149-3114973:-1
so has part: feature:3114578-3114973:-1:exon
so has part: feature:3112406-3112468:-1:exon
so has part: feature:3110109-3110481:-1:exon
so has part: feature:3109591-3109660:-1:exon
so has part: feature:3095368-3095542:-1:exon
so has part: feature:3092674-3092780:-1:exon
so has part: feature:3092200-3092291:-1:exon
so has part: feature:3084149-3084294:-1:exon

XP_048219632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3114578-3114973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3112406-3112468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3110109-3110481:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3109591-3109660:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3095368-3095542:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3092674-3092780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3092200-3092291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3084149-3084294:-1:exon

Mettl4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Mettl4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N(6)-adenine-specific methyltransferase METTL4 isoform X1
translation: MSVVHQLSSGWLLDHLSFINKINYQCHQHHKPHCSKNKPPSFVNFDSLQMDSLSCFGASAPCTALDSTTKPENEDGGNCEVFTEKYVFRTELFNVTKPYITAPVHKKHQQSNEEESLMNGVKTEISISVVGKKRKRCVPFNHGELDAMEYHRKIRELLLDGSLQLIQEGVRSGFLYSLVENRDKCSGEPIILPLETCSLSELCEMAKHLPSLNNMELQTLQLMEDDTSVTEQDLFSRVVENKSSFSKMITLMGQKYLLPPKSSFLLSDISCMQPLLNCRKKFDVIVIDPPWQNKSVKRSNRYSYLSSLQIKQIPIPELAAPNCLVVTWVTNRQKHLRFVKEELYPSWSVEMLAEWHWVKITNSGQFVFPLDSPHKKPYEGLMLGRVQEKAALPLRNPDVNVPPLPDHKLIVSVPCILHSHKPPLAEVLKDYIKPDGECLELFARNLQPGWTSWGNEVLKFQHVDYFIALESGH
SIO_010081: Mettl4
subclass of: SO_0000673
so part of: Mettl4
location: complement(join(3084149..3084294,3092200..3092291,3092674..3092780,3095368..3095542,3109591..3109660,3110109..3110481,3112406..3112468,3114578..3114973))
location: region:3084149-3114973:-1
so has part: feature:3114578-3114973:-1:exon
so has part: feature:3112406-3112468:-1:exon
so has part: feature:3110109-3110481:-1:exon
so has part: feature:3109591-3109660:-1:exon
so has part: feature:3095368-3095542:-1:exon
so has part: feature:3092674-3092780:-1:exon
so has part: feature:3092200-3092291:-1:exon
so has part: feature:3084149-3084294:-1:exon

XP_048219634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3114578-3114973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3112406-3112468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3110109-3110481:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3109591-3109660:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3095368-3095542:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3092674-3092780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3092200-3092291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3084149-3084294:-1:exon

Ndc80
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ndc80
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3118165..3160683
location: region:3118165-3160683:1
so has part: feature:3118165-3160683:1:exon
subclass of: SO_0000010

125364209
type: Gene
SIO_000068: ncbigene

position:3118165:1
position: 3118165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3160683:1
position: 3160683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3118165-3160683:1:exon

Ndc80
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ndc80
product: NDC80 kinetochore complex component, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048363674.1
SIO_010081: Ndc80
subclass of: SO_0000673
so part of: Ndc80
location: join(3118165..3118300,3120109..3120221,3121754..3121831,3124771..3124894,3124991..3125163,3126554..3126656,3133416..3133505,3137099..3137192,3139018..3139124,3139810..3139954,3144218..3144423,3150337..3150489,3150912..3151001,3154749..3154841,3156049..3156179,3157051..3157153,3160446..3160683)
location: region:3118165-3160683:1
so has part: feature:3118165-3118300:1:exon
so has part: feature:3120109-3120221:1:exon
so has part: feature:3121754-3121831:1:exon
so has part: feature:3124771-3124894:1:exon
so has part: feature:3124991-3125163:1:exon
so has part: feature:3126554-3126656:1:exon
so has part: feature:3133416-3133505:1:exon
so has part: feature:3137099-3137192:1:exon
so has part: feature:3139018-3139124:1:exon
so has part: feature:3139810-3139954:1:exon
so has part: feature:3144218-3144423:1:exon
so has part: feature:3150337-3150489:1:exon
so has part: feature:3150912-3151001:1:exon
so has part: feature:3154749-3154841:1:exon
so has part: feature:3156049-3156179:1:exon
so has part: feature:3157051-3157153:1:exon
so has part: feature:3160446-3160683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3118165-3118300:1:exon

position:3118300:1
position: 3118300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3120109-3120221:1:exon

position:3120109:1
position: 3120109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3120221:1
position: 3120221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3121754-3121831:1:exon

position:3121754:1
position: 3121754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3121831:1
position: 3121831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3124771-3124894:1:exon

position:3124771:1
position: 3124771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3124894:1
position: 3124894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3124991-3125163:1:exon

position:3124991:1
position: 3124991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3125163:1
position: 3125163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3126554-3126656:1:exon

position:3126554:1
position: 3126554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3126656:1
position: 3126656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3133416-3133505:1:exon

position:3133416:1
position: 3133416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3133505:1
position: 3133505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3137099-3137192:1:exon

position:3137099:1
position: 3137099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3137192:1
position: 3137192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3139018-3139124:1:exon

position:3139018:1
position: 3139018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3139124:1
position: 3139124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3139810-3139954:1:exon

position:3139810:1
position: 3139810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3139954:1
position: 3139954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3144218-3144423:1:exon

position:3144218:1
position: 3144218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3144423:1
position: 3144423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3150337-3150489:1:exon

position:3150337:1
position: 3150337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3150489:1
position: 3150489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3150912-3151001:1:exon

position:3150912:1
position: 3150912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3151001:1
position: 3151001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3154749-3154841:1:exon

position:3154749:1
position: 3154749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3154841:1
position: 3154841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3156049-3156179:1:exon

position:3156049:1
position: 3156049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3156179:1
position: 3156179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3157051-3157153:1:exon

position:3157051:1
position: 3157051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3157153:1
position: 3157153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3160446-3160683:1:exon

position:3160446:1
position: 3160446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ndc80
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 214514
gene: Ndc80
product: NDC80 kinetochore complex component, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007213442.1
SIO_010081: Ndc80
so part of: Ndc80
location: join(3118165..3118300,3120109..3120221,3121754..3121831,3124771..3124894,3124991..3125163,3126554..3126656,3133416..3133505,3137099..3137192,3139018..3139124,3139810..3139954,3144218..3144423,3150337..3150489,3150912..3151001,3154749..3154841,3157051..3157153,3160446..3160540)
location: region:3118165-3160540:1
so has part: feature:3118165-3118300:1:exon
so has part: feature:3120109-3120221:1:exon
so has part: feature:3121754-3121831:1:exon
so has part: feature:3124771-3124894:1:exon
so has part: feature:3124991-3125163:1:exon
so has part: feature:3126554-3126656:1:exon
so has part: feature:3133416-3133505:1:exon
so has part: feature:3137099-3137192:1:exon
so has part: feature:3139018-3139124:1:exon
so has part: feature:3139810-3139954:1:exon
so has part: feature:3144218-3144423:1:exon
so has part: feature:3150337-3150489:1:exon
so has part: feature:3150912-3151001:1:exon
so has part: feature:3154749-3154841:1:exon
so has part: feature:3157051-3157153:1:exon
so has part: feature:3160446-3160540:1:exon

position:3160540:1
position: 3160540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3118165-3118300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3120109-3120221:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3121754-3121831:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3124771-3124894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3124991-3125163:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3126554-3126656:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3133416-3133505:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3137099-3137192:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3139018-3139124:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3139810-3139954:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3144218-3144423:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3150337-3150489:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3150912-3151001:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3154749-3154841:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3157051-3157153:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3160446-3160540:1:exon

Ndc80
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Ndc80
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinetochore protein NDC80 homolog
translation: MKRSSSISTGGAGRLSMQELRSLDMNKQCLYTPQTKEKPAFGKLSISKPPSERKVSIFGKRTSGHGSRNSQLGVFSSSEKIKDPRPLNDKAFIQQCIRQLCEFLTENGYAYNVSTKSLQAPSIKDFLKIFSFLYGFLCPSYELPDTKFEEEVPRIFKDLGYPFALSKSSMYTVGAPHTWPHIVAALVWLIDCIKLYTAMKESSPVFDDGQPWGEETEDGIVHNKLFLDYTIKCYESFMTGADSFEDKNAELQSKLKNLYNVDASKLESLAAKNKALNEQIARLEEEREKEPNRLESLRKLKTSLQADVQKYQAYMSNLESHSAILDQKLSGLDEEIARVELECETIKQENARLQNIVENQKYSVADIERINHEKNELQQTINKLTKELEAEQQQLWNEELKYARSKETIETQLAEYHKLARKLKLIPKGAENSRGYDFEIKFNPEAGAHCLVKYRAQVYVPLKELLNGNEEEMNKALNKKMGLEDTLEQLNTMKTESKKSVRTLKEEVQKLDDLYQQKVKEAEEEDEKCANELESLEKHKHLLESAVNEGLSEAMNELDTVQREYQLVVQTTTEERRKVGNNLQRLLEIVATHVGSVEKHLEEQIAKADREFEECMSEDLLDNIREITEKYKKNAALLKASDE
SIO_010081: Ndc80
subclass of: SO_0000673
so part of: Ndc80
location: join(3120118..3120221,3121754..3121831,3124771..3124894,3124991..3125163,3126554..3126656,3133416..3133505,3137099..3137192,3139018..3139124,3139810..3139954,3144218..3144423,3150337..3150489,3150912..3151001,3154749..3154841,3156049..3156179,3157051..3157153,3160446..3160583)
location: region:3120118-3160583:1
so has part: feature:3120118-3120221:1:exon
so has part: feature:3121754-3121831:1:exon
so has part: feature:3124771-3124894:1:exon
so has part: feature:3124991-3125163:1:exon
so has part: feature:3126554-3126656:1:exon
so has part: feature:3133416-3133505:1:exon
so has part: feature:3137099-3137192:1:exon
so has part: feature:3139018-3139124:1:exon
so has part: feature:3139810-3139954:1:exon
so has part: feature:3144218-3144423:1:exon
so has part: feature:3150337-3150489:1:exon
so has part: feature:3150912-3151001:1:exon
so has part: feature:3154749-3154841:1:exon
so has part: feature:3156049-3156179:1:exon
so has part: feature:3157051-3157153:1:exon
so has part: feature:3160446-3160583:1:exon

XP_048219631.1
type: Protein
SIO_000068: ncbiprotein

position:3120118:1
position: 3120118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3160583:1
position: 3160583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3120118-3120221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3121754-3121831:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3124771-3124894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3124991-3125163:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3126554-3126656:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3133416-3133505:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3137099-3137192:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3139018-3139124:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3139810-3139954:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3144218-3144423:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3150337-3150489:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3150912-3151001:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3154749-3154841:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3156049-3156179:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3157051-3157153:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3160446-3160583:1:exon

LOC125364246
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364246
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <3210104..3210948
location: region:3210104-3210948:1
so has part: feature:3210104-3210948:1:exon
subclass of: SO_0000010

125364246
type: Gene
SIO_000068: ncbigene

position:3210104:1
position: 3210104
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3210948:1
position: 3210948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3210104-3210948:1:exon

LOC125364246
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125364246
product: periphilin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048363732.1
SIO_010081: LOC125364246
subclass of: SO_0000673
so part of: LOC125364246
location: join(<3210104..3210322,3210584..3210948)
location: region:3210104-3210948:1
so has part: feature:3210104-3210322:1:exon
so has part: feature:3210584-3210948:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3210104-3210322:1:exon

position:3210322:1
position: 3210322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3210584-3210948:1:exon

position:3210584:1
position: 3210584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125364246
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125364246
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: periphilin-1-like
translation: KGASIFQRVTWRSKGLSTQQIWLQCQQQRLLSKRSKPYSFHQSQHRSKERSAQSLKTSQDTSPSSSSAVPSSKVYRQDCETFGMVVKMLIEKDPSLEQSIQFALRQNLHEIGERCVEELKHFIAEYDNSAQDFGESF
SIO_010081: LOC125364246
subclass of: SO_0000673
so part of: LOC125364246
location: join(<3210104..3210322,3210584..3210778)
location: region:3210104-3210778:1
so has part: feature:3210104-3210322:1:exon
so has part: feature:3210584-3210778:1:exon

XP_048219689.1
type: Protein
SIO_000068: ncbiprotein

position:3210778:1
position: 3210778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3210104-3210322:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3210584-3210778:1:exon

LOC125364214
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3220524..3221384
location: region:3220524-3221384:1
so has part: feature:3220524-3221384:1:exon

125364214
type: Gene
SIO_000068: ncbigene

position:3220524:1
position: 3220524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3221384:1
position: 3221384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3220524-3221384:1:exon

LOC125364214
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125364214
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125364214
subclass of: SO_0000673
so part of: LOC125364214
location: 3220524..3220633
location: region:3220524-3220633:1
so has part: feature:3220524-3220633:1:exon

position:3220633:1
position: 3220633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3220524-3220633:1:exon

LOC125364214
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125364214
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125364214
subclass of: SO_0000673
so part of: LOC125364214
location: 3221059..3221384
location: region:3221059-3221384:1
so has part: feature:3221059-3221384:1:exon

position:3221059:1
position: 3221059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3221059-3221384:1:exon

Smchd1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Smchd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3250082..3388186
location: region:3250082-3388186:1
so has part: feature:3250082-3388186:1:exon
subclass of: SO_0000010

125364206
type: Gene
SIO_000068: ncbigene

position:3250082:1
position: 3250082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3388186:1
position: 3388186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3250082-3388186:1:exon

Smchd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Smchd1
product: structural maintenance of chromosomes flexible hinge domain containing 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363666.1
SIO_010081: Smchd1
subclass of: SO_0000673
so part of: Smchd1
location: join(3250082..3250595,3259121..3259196,3260141..3260302,3262895..3262977,3263599..3263729,3269425..3269539,3269641..3269760,3274891..3275057,3279325..3279415,3280585..3280795,3282868..3282988,3283067..3283250,3285209..3285403,3289016..3289129,3289896..3290002,3291363..3291445,3291575..3291688,3298584..3298661,3299007..3299126,3302719..3302863,3304665..3304761,3306579..3306651,3309969..3310108,3310683..3310817,3313350..3313577,3315774..3315922,3316997..3317085,3317652..3317770,3330517..3330684,3334020..3334145,3336758..3336837,3336998..3337155,3338433..3338548,3339138..3339202,3343949..3344036,3345413..3345544,3347632..3347784,3352597..3352723,3352879..3352998,3354619..3354704,3358792..3358914,3361329..3361519,3363107..3363216,3363352..3363422,3370192..3370363,3377893..3378051,3378369..3378483,3387038..3388186)
location: region:3250082-3388186:1
so has part: feature:3250082-3250595:1:exon
so has part: feature:3259121-3259196:1:exon
so has part: feature:3260141-3260302:1:exon
so has part: feature:3262895-3262977:1:exon
so has part: feature:3263599-3263729:1:exon
so has part: feature:3269425-3269539:1:exon
so has part: feature:3269641-3269760:1:exon
so has part: feature:3274891-3275057:1:exon
so has part: feature:3279325-3279415:1:exon
so has part: feature:3280585-3280795:1:exon
so has part: feature:3282868-3282988:1:exon
so has part: feature:3283067-3283250:1:exon
so has part: feature:3285209-3285403:1:exon
so has part: feature:3289016-3289129:1:exon
so has part: feature:3289896-3290002:1:exon
so has part: feature:3291363-3291445:1:exon
so has part: feature:3291575-3291688:1:exon
so has part: feature:3298584-3298661:1:exon
so has part: feature:3299007-3299126:1:exon
so has part: feature:3302719-3302863:1:exon
so has part: feature:3304665-3304761:1:exon
so has part: feature:3306579-3306651:1:exon
so has part: feature:3309969-3310108:1:exon
so has part: feature:3310683-3310817:1:exon
so has part: feature:3313350-3313577:1:exon
so has part: feature:3315774-3315922:1:exon
so has part: feature:3316997-3317085:1:exon
so has part: feature:3317652-3317770:1:exon
so has part: feature:3330517-3330684:1:exon
so has part: feature:3334020-3334145:1:exon
so has part: feature:3336758-3336837:1:exon
so has part: feature:3336998-3337155:1:exon
so has part: feature:3338433-3338548:1:exon
so has part: feature:3339138-3339202:1:exon
so has part: feature:3343949-3344036:1:exon
so has part: feature:3345413-3345544:1:exon
so has part: feature:3347632-3347784:1:exon
so has part: feature:3352597-3352723:1:exon
so has part: feature:3352879-3352998:1:exon
so has part: feature:3354619-3354704:1:exon
so has part: feature:3358792-3358914:1:exon
so has part: feature:3361329-3361519:1:exon
so has part: feature:3363107-3363216:1:exon
so has part: feature:3363352-3363422:1:exon
so has part: feature:3370192-3370363:1:exon
so has part: feature:3377893-3378051:1:exon
so has part: feature:3378369-3378483:1:exon
so has part: feature:3387038-3388186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3250082-3250595:1:exon

position:3250595:1
position: 3250595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3259121-3259196:1:exon

position:3259121:1
position: 3259121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3259196:1
position: 3259196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3260141-3260302:1:exon

position:3260141:1
position: 3260141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3260302:1
position: 3260302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3262895-3262977:1:exon

position:3262895:1
position: 3262895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3262977:1
position: 3262977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3263599-3263729:1:exon

position:3263599:1
position: 3263599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3263729:1
position: 3263729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3269425-3269539:1:exon

position:3269425:1
position: 3269425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3269539:1
position: 3269539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3269641-3269760:1:exon

position:3269641:1
position: 3269641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3269760:1
position: 3269760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3274891-3275057:1:exon

position:3274891:1
position: 3274891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3275057:1
position: 3275057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3279325-3279415:1:exon

position:3279325:1
position: 3279325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3279415:1
position: 3279415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3280585-3280795:1:exon

position:3280585:1
position: 3280585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3280795:1
position: 3280795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3282868-3282988:1:exon

position:3282868:1
position: 3282868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3282988:1
position: 3282988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3283067-3283250:1:exon

position:3283067:1
position: 3283067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3283250:1
position: 3283250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3285209-3285403:1:exon

position:3285209:1
position: 3285209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3285403:1
position: 3285403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3289016-3289129:1:exon

position:3289016:1
position: 3289016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3289129:1
position: 3289129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3289896-3290002:1:exon

position:3289896:1
position: 3289896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3290002:1
position: 3290002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3291363-3291445:1:exon

position:3291363:1
position: 3291363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3291445:1
position: 3291445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3291575-3291688:1:exon

position:3291575:1
position: 3291575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3291688:1
position: 3291688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3298584-3298661:1:exon

position:3298584:1
position: 3298584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3298661:1
position: 3298661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3299007-3299126:1:exon

position:3299007:1
position: 3299007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3299126:1
position: 3299126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3302719-3302863:1:exon

position:3302719:1
position: 3302719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3302863:1
position: 3302863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3304665-3304761:1:exon

position:3304665:1
position: 3304665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3304761:1
position: 3304761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3306579-3306651:1:exon

position:3306579:1
position: 3306579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3306651:1
position: 3306651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3309969-3310108:1:exon

position:3309969:1
position: 3309969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3310108:1
position: 3310108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3310683-3310817:1:exon

position:3310683:1
position: 3310683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3310817:1
position: 3310817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3313350-3313577:1:exon

position:3313350:1
position: 3313350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3313577:1
position: 3313577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3315774-3315922:1:exon

position:3315774:1
position: 3315774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3315922:1
position: 3315922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3316997-3317085:1:exon

position:3316997:1
position: 3316997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3317085:1
position: 3317085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3317652-3317770:1:exon

position:3317652:1
position: 3317652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3317770:1
position: 3317770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3330517-3330684:1:exon

position:3330517:1
position: 3330517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3330684:1
position: 3330684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3334020-3334145:1:exon

position:3334020:1
position: 3334020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3334145:1
position: 3334145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3336758-3336837:1:exon

position:3336758:1
position: 3336758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3336837:1
position: 3336837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3336998-3337155:1:exon

position:3336998:1
position: 3336998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3337155:1
position: 3337155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3338433-3338548:1:exon

position:3338433:1
position: 3338433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3338548:1
position: 3338548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:3339138-3339202:1:exon

position:3339138:1
position: 3339138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3339202:1
position: 3339202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:3343949-3344036:1:exon

position:3343949:1
position: 3343949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3344036:1
position: 3344036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:3345413-3345544:1:exon

position:3345413:1
position: 3345413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3345544:1
position: 3345544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:3347632-3347784:1:exon

position:3347632:1
position: 3347632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3347784:1
position: 3347784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:3352597-3352723:1:exon

position:3352597:1
position: 3352597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3352723:1
position: 3352723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:3352879-3352998:1:exon

position:3352879:1
position: 3352879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3352998:1
position: 3352998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:3354619-3354704:1:exon

position:3354619:1
position: 3354619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3354704:1
position: 3354704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:3358792-3358914:1:exon

position:3358792:1
position: 3358792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3358914:1
position: 3358914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:3361329-3361519:1:exon

position:3361329:1
position: 3361329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3361519:1
position: 3361519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:3363107-3363216:1:exon

position:3363107:1
position: 3363107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3363216:1
position: 3363216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:3363352-3363422:1:exon

position:3363352:1
position: 3363352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3363422:1
position: 3363422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:3370192-3370363:1:exon

position:3370192:1
position: 3370192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3370363:1
position: 3370363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:3377893-3378051:1:exon

position:3377893:1
position: 3377893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3378051:1
position: 3378051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:3378369-3378483:1:exon

position:3378369:1
position: 3378369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3378483:1
position: 3378483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:3387038-3388186:1:exon

position:3387038:1
position: 3387038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Smchd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Smchd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: structural maintenance of chromosomes flexible hinge domain-containing protein 1
translation: MAAEGANGPSVEAGEAGGGDGGRTVYLFDRREKNSELGDRELQVDERADFAGFRASVCQTIGISSEEKFVITTTSRKEITQDNFDDIVKDGVTLYLLQSVNQLLPAATKERIDFLPHYDTLVKSGMYEYYASEGQNPLPFALAELIDNSLSATSRNVDIRRIQIKLLFDETQGKPAVAVIDNGRGMTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPVPVPRSLNSDISYFGVGGKQAVFFVGQSARMISKPADSQDVHELVLSKEDFEKKEKNKEAIYSGYIRNRKPSDSVHITNDDERFLHNLIVEEKEKDSFTAVVITGVQPEHIQYLKNYFHLWTRQLAHIYHYYIHGPKGNEKRTSKEVGPFNNIDIDISMFEKGKAPKIVNLREIQDDMQTLYINTASDSFEFKAHVEGDGVVEGIIRYHPFLYDRETYPDDPCFPSKLKDEDDDDDCFTLDKAARGKRPIFECFWNGRLIPYTSVEDFDWCTPPKKRGLAPIECYNRISGALFTNDKFQVSTNKLTFMDLELKLKDKNTLFTRILNGQEQRMKIDREFALWLKDCHEKYDKQIKFTLFKGIITRPDLPSKKQGPWATYSAIEWDGKIYKAGQLVKTTKTLPLFYGSIVRFFLYGDHDGEVYATGGEVQIAMEPQALYDEERTVPIAKLDRTVAEKTVRKYVEDEMARLPDRLSVTWPEGDELLPNETRPAGTPIGALRIEILNKKGEAMQKLPGTSHGGSKKLLVELKVILHSSSGNKEIISHISQHGGKWPYWFKKMENIQKLGNYTLKLQVVLNESNADTYAGRPLPSKAIKFSVKEGKPEKFSFGLLDLPFRVGVPFNIPLEFQDEFGHTSQLVTNIQPVLEASGLSLHYEEITKGPNCVIRGVRAKGSINSCQGKNFNLKVCLPGLKEDSQILKIRLLPGPPHRLKVKPDSEILVIENGTAFPFQVDVLDESDNITVQPKLIVQCKFSGGPNLPIYVVDCSSSGTSILTGPVIQVQNIKKDQTLKARIEIPSCKGVLPVEKTIKLLPSSHVAQLQIFSIEGQKAIQIKHQDEVNWIAGDTMRNLIFQMYDEGGREINITATLAEKVKVNWTPEINKENLLQGLLPDVQVPTSIKDKRYCQVSFQDDHVSLESAFTVRPLPDDPKHLKCELKGGKTVQMGQELQGEVVIIITDQYGNQVPAFSPSSLSALSVAGVGLDSSNLTTTLQENTQSISVRGIKFIPGPPGNKDLCFAWREFSDFIRVQLISGPPAKLLLIDWPELKEAIPVINGRELERPLAVQLCDQWDNPALIPNVKISLIKASSLKLTPSTQQHKTDEKGRANLGVFLVFASRGEHTIQVKAIYNKNTIQGPVIKLMVLPDPEKPIRLKVKYDKDVSFLAGDVFTDFIVSVISEDESIIKNINAARISMKMWKLANNMNRPPPNAEIFSCNKIKDNDKEEGCFCFRDKVIPNKVGTYCIQFAFMMDKVNMLNSEQIIVDVLPNLPMKLVPEIQPATPAVSNVRSIASRTLVRDLHLSITDNYGNHTGKNLVGTVVATIKGFNEEDIDIPLFIGKVRTLEFPFVNGSAKITSLVLAENSPGKDSTEYIIIFEPRLSPLSRTLEPYILPFMFYNDVKKQQQMAALTKEKDQLSKSIIMYRSLFEASKQLLDEMKCQVEEAKLKESQLRHELKTYNIDIPAAQQVSYIEAVLKRKIAEQEELKKKPRRSCTLPNYTKGTGDVLGKIAHLAQIEDDRAAMVISWHLASDMDCVVTLTTDAARRIYDETQGRQQVLPLDSIYKKTLPDWKRPLPHFRNGKLYFKPIGDPVFARDLLTFPDNVEHCETVFGMLLGDTIILDNLDAANHYRKEVVKITHCPTLLTRDGDRIRSNGKFGGLQNKAPPMDKLRGMVFGAPIPKQCRILGEQIDLLQQYRSAVCKLGSVNEDLNGQLEYLHTPDMKKKKQELDEQEKSLKLIEQKLGMTPTRKCNDSLHHSPKVEMTECPIPPKRMRRETTRQNRVNN
SIO_010081: Smchd1
subclass of: SO_0000673
so part of: Smchd1
location: join(3250419..3250595,3259121..3259196,3260141..3260302,3262895..3262977,3263599..3263729,3269425..3269539,3269641..3269760,3274891..3275057,3279325..3279415,3280585..3280795,3282868..3282988,3283067..3283250,3285209..3285403,3289016..3289129,3289896..3290002,3291363..3291445,3291575..3291688,3298584..3298661,3299007..3299126,3302719..3302863,3304665..3304761,3306579..3306651,3309969..3310108,3310683..3310817,3313350..3313577,3315774..3315922,3316997..3317085,3317652..3317770,3330517..3330684,3334020..3334145,3336758..3336837,3336998..3337155,3338433..3338548,3339138..3339202,3343949..3344036,3345413..3345544,3347632..3347784,3352597..3352723,3352879..3352998,3354619..3354704,3358792..3358914,3361329..3361519,3363107..3363216,3363352..3363422,3370192..3370363,3377893..3378051,3378369..3378483,3387038..3387050)
location: region:3250419-3387050:1
so has part: feature:3250419-3250595:1:exon
so has part: feature:3259121-3259196:1:exon
so has part: feature:3260141-3260302:1:exon
so has part: feature:3262895-3262977:1:exon
so has part: feature:3263599-3263729:1:exon
so has part: feature:3269425-3269539:1:exon
so has part: feature:3269641-3269760:1:exon
so has part: feature:3274891-3275057:1:exon
so has part: feature:3279325-3279415:1:exon
so has part: feature:3280585-3280795:1:exon
so has part: feature:3282868-3282988:1:exon
so has part: feature:3283067-3283250:1:exon
so has part: feature:3285209-3285403:1:exon
so has part: feature:3289016-3289129:1:exon
so has part: feature:3289896-3290002:1:exon
so has part: feature:3291363-3291445:1:exon
so has part: feature:3291575-3291688:1:exon
so has part: feature:3298584-3298661:1:exon
so has part: feature:3299007-3299126:1:exon
so has part: feature:3302719-3302863:1:exon
so has part: feature:3304665-3304761:1:exon
so has part: feature:3306579-3306651:1:exon
so has part: feature:3309969-3310108:1:exon
so has part: feature:3310683-3310817:1:exon
so has part: feature:3313350-3313577:1:exon
so has part: feature:3315774-3315922:1:exon
so has part: feature:3316997-3317085:1:exon
so has part: feature:3317652-3317770:1:exon
so has part: feature:3330517-3330684:1:exon
so has part: feature:3334020-3334145:1:exon
so has part: feature:3336758-3336837:1:exon
so has part: feature:3336998-3337155:1:exon
so has part: feature:3338433-3338548:1:exon
so has part: feature:3339138-3339202:1:exon
so has part: feature:3343949-3344036:1:exon
so has part: feature:3345413-3345544:1:exon
so has part: feature:3347632-3347784:1:exon
so has part: feature:3352597-3352723:1:exon
so has part: feature:3352879-3352998:1:exon
so has part: feature:3354619-3354704:1:exon
so has part: feature:3358792-3358914:1:exon
so has part: feature:3361329-3361519:1:exon
so has part: feature:3363107-3363216:1:exon
so has part: feature:3363352-3363422:1:exon
so has part: feature:3370192-3370363:1:exon
so has part: feature:3377893-3378051:1:exon
so has part: feature:3378369-3378483:1:exon
so has part: feature:3387038-3387050:1:exon

XP_048219623.1
type: Protein
SIO_000068: ncbiprotein

position:3250419:1
position: 3250419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3387050:1
position: 3387050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3250419-3250595:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3259121-3259196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3260141-3260302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3262895-3262977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3263599-3263729:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3269425-3269539:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3269641-3269760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3274891-3275057:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3279325-3279415:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3280585-3280795:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3282868-3282988:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3283067-3283250:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3285209-3285403:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3289016-3289129:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3289896-3290002:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3291363-3291445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3291575-3291688:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3298584-3298661:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3299007-3299126:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3302719-3302863:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3304665-3304761:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3306579-3306651:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3309969-3310108:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3310683-3310817:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3313350-3313577:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3315774-3315922:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3316997-3317085:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3317652-3317770:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3330517-3330684:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3334020-3334145:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3336758-3336837:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3336998-3337155:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3338433-3338548:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3339138-3339202:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3343949-3344036:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:3345413-3345544:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:3347632-3347784:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:3352597-3352723:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:3352879-3352998:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:3354619-3354704:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:3358792-3358914:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:3361329-3361519:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:3363107-3363216:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:3363352-3363422:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:3370192-3370363:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:3377893-3378051:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:3378369-3378483:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:3387038-3387050:1:exon

LOC125364218
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3257631..3258236)
location: region:3257631-3258236:-1
so has part: feature:3257631-3258236:-1:exon
subclass of: SO_0000011

125364218
type: Gene
SIO_000068: ncbigene

position:3257631:-1
position: 3257631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3258236:-1
position: 3258236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3257631-3258236:-1:exon

LOC125364218
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125364218
product: uncharacterized LOC125364218
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007213446.1
SIO_010081: LOC125364218
subclass of: SO_0000673
so part of: LOC125364218
location: complement(join(3257631..3257853,3257980..3257981,3258091..3258236))
location: region:3257631-3258236:-1
so has part: feature:3258091-3258236:-1:exon
so has part: feature:3257980-3257981:-1:exon
so has part: feature:3257631-3257853:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3258091-3258236:-1:exon

position:3258091:-1
position: 3258091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3257980-3257981:-1:exon

position:3257980:-1
position: 3257980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3257981:-1
position: 3257981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3257631-3257853:-1:exon

position:3257853:-1
position: 3257853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125364217
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364217
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3367010..3368719
location: region:3367010-3368719:1
so has part: feature:3367010-3368719:1:exon
subclass of: SO_0000011

125364217
type: Gene
SIO_000068: ncbigene

position:3367010:1
position: 3367010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3368719:1
position: 3368719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3367010-3368719:1:exon

LOC125364217
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125364217
product: uncharacterized LOC125364217
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007213445.1
SIO_010081: LOC125364217
subclass of: SO_0000673
so part of: LOC125364217
location: join(3367010..3368264,3368489..3368719)
location: region:3367010-3368719:1
so has part: feature:3367010-3368264:1:exon
so has part: feature:3368489-3368719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3367010-3368264:1:exon

position:3368264:1
position: 3368264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3368489-3368719:1:exon

position:3368489:1
position: 3368489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125364213
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3371919..3372323)
location: region:3371919-3372323:-1
so has part: feature:3371919-3372323:-1:exon

125364213
type: Gene
SIO_000068: ncbigene

position:3371919:-1
position: 3371919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3372323:-1
position: 3372323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3371919-3372323:-1:exon

LOC125364213
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125364213
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125364213
subclass of: SO_0000673
so part of: LOC125364213
location: complement(3371919..3372323)
location: region:3371919-3372323:-1
so has part: feature:3371919-3372323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3371919-3372323:-1:exon

Trnak-cuu
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Trnak-cuu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3393893..3393961
location: region:3393893-3393961:1
so has part: feature:3393893-3393961:1:exon
subclass of: SO_0000663

125364359
type: Gene
SIO_000068: ncbigene

position:3393893:1
position: 3393893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3393961:1
position: 3393961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3393893-3393961:1:exon

Trnak-cuu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 214514
gene: Trnak-cuu
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3393922..3393924,aa:Lys,seq:ctt)
SIO_010081: Trnak-cuu
subclass of: SO_0000673
so part of: Trnak-cuu
location: 3393893..3393961
location: region:3393893-3393961:1
so has part: feature:3393893-3393961:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3393893-3393961:1:exon

Emilin2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Emilin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3424698..3483835
location: region:3424698-3483835:1
so has part: feature:3424698-3483835:1:exon
subclass of: SO_0000010

125364207
type: Gene
SIO_000068: ncbigene

position:3424698:1
position: 3424698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3483835:1
position: 3483835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3424698-3483835:1:exon

Emilin2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Emilin2
product: elastin microfibril interfacer 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363668.1
SIO_010081: Emilin2
subclass of: SO_0000673
so part of: Emilin2
location: join(3424698..3424913,3425336..3425458,3454608..3454783,3460470..3462404,3479852..3480226,3481065..3481109,3481611..3481739,3482845..3483835)
location: region:3424698-3483835:1
so has part: feature:3424698-3424913:1:exon
so has part: feature:3425336-3425458:1:exon
so has part: feature:3454608-3454783:1:exon
so has part: feature:3460470-3462404:1:exon
so has part: feature:3479852-3480226:1:exon
so has part: feature:3481065-3481109:1:exon
so has part: feature:3481611-3481739:1:exon
so has part: feature:3482845-3483835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3424698-3424913:1:exon

position:3424913:1
position: 3424913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3425336-3425458:1:exon

position:3425336:1
position: 3425336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3425458:1
position: 3425458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3454608-3454783:1:exon

position:3454608:1
position: 3454608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3454783:1
position: 3454783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3460470-3462404:1:exon

position:3460470:1
position: 3460470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3462404:1
position: 3462404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3479852-3480226:1:exon

position:3479852:1
position: 3479852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3480226:1
position: 3480226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3481065-3481109:1:exon

position:3481065:1
position: 3481065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3481109:1
position: 3481109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3481611-3481739:1:exon

position:3481611:1
position: 3481611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3481739:1
position: 3481739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3482845-3483835:1:exon

position:3482845:1
position: 3482845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Emilin2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Emilin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EMILIN-2
translation: MCRPHAPWRWALALLALGGSGLCHAGPQPGRPARPSARNKNWCAFIVHKNVSCSVQEGSESFVQAQYNCGWSQLPCPSALVYRVNFRPRYVTRYKTVTHLEWRCCPGFRGTDCQEGLKDPSRTLRPTPARPRNSVKKATDTEPSQVSQPKQTLSPTRAAEPSQAGDPKQGPQELQEKKIQVLEEKVLRLTRMVVDLQSSMAGVHENLRHIIQEDASKTLAPGLSPLHPQPAPGGDTAGDLDNVQPPGLLGTKESGMKDIKSELAEVKDTLKTKSDKLEELDGKVKGYEGQLKQLQEAAQGPTVTMTTNELYQAYVDSKMEALREELMEGMDRKLADLKNTCEYKLVGLQQQCEDYGSSYLGVIELIGEKEASLRKDISDLRAQLQHPSSRPDCCSGGGGGVDSDVGQQIKTLDQKIERVAEATRMLNGRLDNEFDRLAVPEADADFDARWNELDARINVTEKNAEEHCFYIEETLRGAIHGEVDDLKQLLDQKLRSLEDRLGSVLQLANGSEVGVAAPGPALPPRGSGTGNEQVLMELNHLKVKVQVVEDFCLQNSQGGHHETEGTLPNGEDHVGDILSLLASLNATMQRKFQETEESIQKLQEDFSFLYFQLNHTENDVSQLENEMTNDQAGENGESGGFSKVGEPDRMAGTLPSPQDPGAQCCGQLEARWQQWQGQLLAELDTCKETTHGVHREVSTVEGRVSQMEKTCSQLDAISGSLQRIKEGLNKHVSSLWTCVRQMNGTLRSHSRDISGLKNSVQQFYSHVFQISTDLQDLVKFQPAATEAPSEAPQPPAETAPQVPPTGPSTAEAPTEPPQPRPPPPKKPALPPHIGQQPVLPQRPLQPLPPLVWPGWPGLPLPGSTGVIMETGEAGPPGRMGVSGRGLPHGVDGQTGQAPIPSAEGYAGAPGYPKSPPVAPPIAPPGAPAPALVSFSAGLTQKPFSSDGGIVLFNKVLVNDGDVYNPNTGIFTAPYDGRYLITATLTPERDTYVEAVLSVSNASVAQLHTAGYRREFLEYHRPPGAVHTCGGPGAFHLIVHLKAGDGVNVVVTGGRLAHTDFDEMYSTFSGVFLYPFLAHL
SIO_010081: Emilin2
subclass of: SO_0000673
so part of: Emilin2
location: join(3424795..3424913,3425336..3425458,3454608..3454783,3460470..3462404,3479852..3480226,3481065..3481109,3481611..3481739,3482845..3483182)
location: region:3424795-3483182:1
so has part: feature:3424795-3424913:1:exon
so has part: feature:3425336-3425458:1:exon
so has part: feature:3454608-3454783:1:exon
so has part: feature:3460470-3462404:1:exon
so has part: feature:3479852-3480226:1:exon
so has part: feature:3481065-3481109:1:exon
so has part: feature:3481611-3481739:1:exon
so has part: feature:3482845-3483182:1:exon

XP_048219625.1
type: Protein
SIO_000068: ncbiprotein

position:3424795:1
position: 3424795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3483182:1
position: 3483182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3424795-3424913:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3425336-3425458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3454608-3454783:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3460470-3462404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3479852-3480226:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3481065-3481109:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3481611-3481739:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3482845-3483182:1:exon

Lpin2
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Lpin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3486801..3592511)
location: region:3486801-3592511:-1
so has part: feature:3486801-3592511:-1:exon
subclass of: SO_0000010

125364208
type: Gene
SIO_000068: ncbigene

position:3486801:-1
position: 3486801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3592511:-1
position: 3592511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3486801-3592511:-1:exon

Lpin2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Lpin2
product: lipin 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363671.1
SIO_010081: Lpin2
subclass of: SO_0000673
so part of: Lpin2
location: complement(join(3486801..3490156,3490428..3490531,3491168..3491282,3491545..3491697,3493346..3493432,3494190..3494338,3495157..3495301,3497009..3497091,3498144..3498233,3499013..3499082,3499707..3499800,3502262..3502449,3505092..3505191,3506565..3506910,3507873..3507996,3508674..3508781,3514026..3514327,3517091..3517186,3526230..3526430,3592215..3592511))
location: region:3486801-3592511:-1
so has part: feature:3592215-3592511:-1:exon
so has part: feature:3526230-3526430:-1:exon
so has part: feature:3517091-3517186:-1:exon
so has part: feature:3514026-3514327:-1:exon
so has part: feature:3508674-3508781:-1:exon
so has part: feature:3507873-3507996:-1:exon
so has part: feature:3506565-3506910:-1:exon
so has part: feature:3505092-3505191:-1:exon
so has part: feature:3502262-3502449:-1:exon
so has part: feature:3499707-3499800:-1:exon
so has part: feature:3499013-3499082:-1:exon
so has part: feature:3498144-3498233:-1:exon
so has part: feature:3497009-3497091:-1:exon
so has part: feature:3495157-3495301:-1:exon
so has part: feature:3494190-3494338:-1:exon
so has part: feature:3493346-3493432:-1:exon
so has part: feature:3491545-3491697:-1:exon
so has part: feature:3491168-3491282:-1:exon
so has part: feature:3490428-3490531:-1:exon
so has part: feature:3486801-3490156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3592215-3592511:-1:exon

position:3592215:-1
position: 3592215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3526230-3526430:-1:exon

position:3526230:-1
position: 3526230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3526430:-1
position: 3526430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3517091-3517186:-1:exon

position:3517091:-1
position: 3517091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3517186:-1
position: 3517186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3514026-3514327:-1:exon

position:3514026:-1
position: 3514026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3514327:-1
position: 3514327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3508674-3508781:-1:exon

position:3508674:-1
position: 3508674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3508781:-1
position: 3508781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3507873-3507996:-1:exon

position:3507873:-1
position: 3507873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3507996:-1
position: 3507996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3506565-3506910:-1:exon

position:3506565:-1
position: 3506565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3506910:-1
position: 3506910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3505092-3505191:-1:exon

position:3505092:-1
position: 3505092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3505191:-1
position: 3505191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3502262-3502449:-1:exon

position:3502262:-1
position: 3502262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3502449:-1
position: 3502449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3499707-3499800:-1:exon

position:3499707:-1
position: 3499707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3499800:-1
position: 3499800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3499013-3499082:-1:exon

position:3499013:-1
position: 3499013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3499082:-1
position: 3499082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3498144-3498233:-1:exon

position:3498144:-1
position: 3498144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3498233:-1
position: 3498233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3497009-3497091:-1:exon

position:3497009:-1
position: 3497009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3497091:-1
position: 3497091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3495157-3495301:-1:exon

position:3495157:-1
position: 3495157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3495301:-1
position: 3495301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3494190-3494338:-1:exon

position:3494190:-1
position: 3494190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3494338:-1
position: 3494338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3493346-3493432:-1:exon

position:3493346:-1
position: 3493346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3493432:-1
position: 3493432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3491545-3491697:-1:exon

position:3491545:-1
position: 3491545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3491697:-1
position: 3491697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3491168-3491282:-1:exon

position:3491168:-1
position: 3491168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3491282:-1
position: 3491282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3490428-3490531:-1:exon

position:3490428:-1
position: 3490428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3490531:-1
position: 3490531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3486801-3490156:-1:exon

position:3490156:-1
position: 3490156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Lpin2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Lpin2
product: lipin 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363672.1
SIO_010081: Lpin2
subclass of: SO_0000673
so part of: Lpin2
location: complement(join(3486801..3490156,3490428..3490531,3491168..3491282,3491545..3491697,3493346..3493432,3494190..3494338,3495157..3495301,3497009..3497091,3498144..3498233,3499013..3499082,3499707..3499800,3502262..3502449,3505092..3505191,3506565..3506910,3507873..3507996,3508674..3508781,3514026..3514327,3517091..3517186,3526230..3526430,3585925..3586310))
location: region:3486801-3586310:-1
so has part: feature:3585925-3586310:-1:exon
so has part: feature:3526230-3526430:-1:exon
so has part: feature:3517091-3517186:-1:exon
so has part: feature:3514026-3514327:-1:exon
so has part: feature:3508674-3508781:-1:exon
so has part: feature:3507873-3507996:-1:exon
so has part: feature:3506565-3506910:-1:exon
so has part: feature:3505092-3505191:-1:exon
so has part: feature:3502262-3502449:-1:exon
so has part: feature:3499707-3499800:-1:exon
so has part: feature:3499013-3499082:-1:exon
so has part: feature:3498144-3498233:-1:exon
so has part: feature:3497009-3497091:-1:exon
so has part: feature:3495157-3495301:-1:exon
so has part: feature:3494190-3494338:-1:exon
so has part: feature:3493346-3493432:-1:exon
so has part: feature:3491545-3491697:-1:exon
so has part: feature:3491168-3491282:-1:exon
so has part: feature:3490428-3490531:-1:exon
so has part: feature:3486801-3490156:-1:exon

position:3586310:-1
position: 3586310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3585925-3586310:-1:exon

position:3585925:-1
position: 3585925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3526230-3526430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3517091-3517186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3514026-3514327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3508674-3508781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3507873-3507996:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3506565-3506910:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3505092-3505191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3502262-3502449:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3499707-3499800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3499013-3499082:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3498144-3498233:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3497009-3497091:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3495157-3495301:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3494190-3494338:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3493346-3493432:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3491545-3491697:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3491168-3491282:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3490428-3490531:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3486801-3490156:-1:exon

Lpin2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Lpin2
product: lipin 2, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363673.1
SIO_010081: Lpin2
subclass of: SO_0000673
so part of: Lpin2
location: complement(join(3486801..3490156,3490428..3490531,3491168..3491282,3491545..3491697,3493346..3493432,3494190..3494338,3495157..3495301,3497009..3497091,3498144..3498233,3499013..3499082,3499707..3499800,3502262..3502449,3505092..3505191,3506565..3506910,3507873..3507996,3508674..3508781,3514026..3514327,3517091..3517186,3526230..3526430,3580326..3580493))
location: region:3486801-3580493:-1
so has part: feature:3580326-3580493:-1:exon
so has part: feature:3526230-3526430:-1:exon
so has part: feature:3517091-3517186:-1:exon
so has part: feature:3514026-3514327:-1:exon
so has part: feature:3508674-3508781:-1:exon
so has part: feature:3507873-3507996:-1:exon
so has part: feature:3506565-3506910:-1:exon
so has part: feature:3505092-3505191:-1:exon
so has part: feature:3502262-3502449:-1:exon
so has part: feature:3499707-3499800:-1:exon
so has part: feature:3499013-3499082:-1:exon
so has part: feature:3498144-3498233:-1:exon
so has part: feature:3497009-3497091:-1:exon
so has part: feature:3495157-3495301:-1:exon
so has part: feature:3494190-3494338:-1:exon
so has part: feature:3493346-3493432:-1:exon
so has part: feature:3491545-3491697:-1:exon
so has part: feature:3491168-3491282:-1:exon
so has part: feature:3490428-3490531:-1:exon
so has part: feature:3486801-3490156:-1:exon

position:3580493:-1
position: 3580493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3580326-3580493:-1:exon

position:3580326:-1
position: 3580326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3526230-3526430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3517091-3517186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3514026-3514327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3508674-3508781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3507873-3507996:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3506565-3506910:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3505092-3505191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3502262-3502449:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3499707-3499800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3499013-3499082:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3498144-3498233:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3497009-3497091:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3495157-3495301:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3494190-3494338:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3493346-3493432:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3491545-3491697:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3491168-3491282:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3490428-3490531:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3486801-3490156:-1:exon

Lpin2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Lpin2
product: lipin 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363670.1
SIO_010081: Lpin2
subclass of: SO_0000673
so part of: Lpin2
location: complement(join(3486801..3490156,3490428..3490531,3491168..3491282,3491545..3491697,3493346..3493432,3494190..3494338,3495157..3495301,3497009..3497091,3498144..3498233,3499013..3499082,3499707..3499800,3502262..3502449,3505092..3505191,3506565..3506910,3507873..3507996,3508674..3508781,3514026..3514327,3517091..3517186,3526230..3526430,3552276..3553178))
location: region:3486801-3553178:-1
so has part: feature:3552276-3553178:-1:exon
so has part: feature:3526230-3526430:-1:exon
so has part: feature:3517091-3517186:-1:exon
so has part: feature:3514026-3514327:-1:exon
so has part: feature:3508674-3508781:-1:exon
so has part: feature:3507873-3507996:-1:exon
so has part: feature:3506565-3506910:-1:exon
so has part: feature:3505092-3505191:-1:exon
so has part: feature:3502262-3502449:-1:exon
so has part: feature:3499707-3499800:-1:exon
so has part: feature:3499013-3499082:-1:exon
so has part: feature:3498144-3498233:-1:exon
so has part: feature:3497009-3497091:-1:exon
so has part: feature:3495157-3495301:-1:exon
so has part: feature:3494190-3494338:-1:exon
so has part: feature:3493346-3493432:-1:exon
so has part: feature:3491545-3491697:-1:exon
so has part: feature:3491168-3491282:-1:exon
so has part: feature:3490428-3490531:-1:exon
so has part: feature:3486801-3490156:-1:exon

position:3553178:-1
position: 3553178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3552276-3553178:-1:exon

position:3552276:-1
position: 3552276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3526230-3526430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3517091-3517186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3514026-3514327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3508674-3508781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3507873-3507996:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3506565-3506910:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3505092-3505191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3502262-3502449:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3499707-3499800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3499013-3499082:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3498144-3498233:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3497009-3497091:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3495157-3495301:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3494190-3494338:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3493346-3493432:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3491545-3491697:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3491168-3491282:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3490428-3490531:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3486801-3490156:-1:exon

Lpin2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Lpin2
product: lipin 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363669.1
SIO_010081: Lpin2
subclass of: SO_0000673
so part of: Lpin2
location: complement(join(3486801..3490156,3490428..3490531,3491168..3491282,3491545..3491697,3493346..3493432,3494190..3494338,3495157..3495301,3497009..3497091,3498144..3498233,3499013..3499082,3499707..3499800,3502262..3502449,3505092..3505191,3506565..3506910,3507873..3507996,3508674..3508781,3514026..3514327,3517091..3517186,3526230..3526430,3552001..3552216))
location: region:3486801-3552216:-1
so has part: feature:3552001-3552216:-1:exon
so has part: feature:3526230-3526430:-1:exon
so has part: feature:3517091-3517186:-1:exon
so has part: feature:3514026-3514327:-1:exon
so has part: feature:3508674-3508781:-1:exon
so has part: feature:3507873-3507996:-1:exon
so has part: feature:3506565-3506910:-1:exon
so has part: feature:3505092-3505191:-1:exon
so has part: feature:3502262-3502449:-1:exon
so has part: feature:3499707-3499800:-1:exon
so has part: feature:3499013-3499082:-1:exon
so has part: feature:3498144-3498233:-1:exon
so has part: feature:3497009-3497091:-1:exon
so has part: feature:3495157-3495301:-1:exon
so has part: feature:3494190-3494338:-1:exon
so has part: feature:3493346-3493432:-1:exon
so has part: feature:3491545-3491697:-1:exon
so has part: feature:3491168-3491282:-1:exon
so has part: feature:3490428-3490531:-1:exon
so has part: feature:3486801-3490156:-1:exon

position:3552216:-1
position: 3552216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3552001-3552216:-1:exon

position:3552001:-1
position: 3552001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3526230-3526430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3517091-3517186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3514026-3514327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3508674-3508781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3507873-3507996:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3506565-3506910:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3505092-3505191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3502262-3502449:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3499707-3499800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3499013-3499082:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3498144-3498233:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3497009-3497091:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3495157-3495301:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3494190-3494338:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3493346-3493432:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3491545-3491697:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3491168-3491282:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3490428-3490531:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3486801-3490156:-1:exon

Lpin2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Lpin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate phosphatase LPIN2 isoform X3
translation: MGSSRLNWSQTMNYVGQLAGQVLVTVKELYKGINQATLSGCIDVVVVRQQDGTYQCSPFHVRFGKLGVLRSKEKVIDIEINGNAVDLHMKLGDNGEAFFVEETGEEYEKLPAYLATSPIPTEDKFFKDIDTPLVRAGGDERASQSAAIAHILETETIFTPSSVKKKKRRRKKCKQDSKKEEQAASPGVEDACDVVVSSDDEKGAQAARGSANASLKEEEYKEPSLFHSGDHYPLSDGDWSPLESTYSQAVCPKSDSELEVKPAESLLRSESHMEWTWGGFPESTKVTKRERYDYHPWTATITPSENTHFRVIPSEDSLMREVEKDANVEETVCTIVKPKPRALCKQMSDTSSAVELLQPPLETPQISSMLDADHLSRPSLAEAPSEPKPATKVDSPSKKKGVHKRSQHQGPDDIYLEDLKALEPEVAALYFPKSEADPGSRQWPESDTLSGSQSPQSVGSAAADSGTECLSDSAMDLPDVTLSLCGGLSENGEISKEKFMEHIITYHEFAENPGLIDNPNLVIRIYNRYYNWALAAPMILSLQVFQKSLPKATLESWVKDKMPKKSGRWWFWRKRESMTKQLPAAKEGKSEMPPTSELQSDPKEPASARPAEDDTSSDEGSQELEETIKVDTLPTETLSHSSMTSYKKSLRLSSDQIAKLKLHDGPNDVVFSITTQYQGTCRCAGTIYLWNWNDKIIISDIDGTITKSDALGQILPQLGKDWTHQGIAKLYHSINENGYKFLYCSARAIGMADMTRGYLHWVNDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSKQPFYAAFGNRPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLNKEQNSAFLCPEFSSFCYWRDPIPDVDLDDLA
SIO_010081: Lpin2
subclass of: SO_0000673
so part of: Lpin2
location: complement(join(3490012..3490156,3490428..3490531,3491168..3491282,3491545..3491697,3493346..3493432,3494190..3494338,3495157..3495301,3497009..3497091,3498144..3498233,3499013..3499082,3499707..3499800,3502262..3502449,3505092..3505191,3506565..3506910,3507873..3507996,3508674..3508781,3514026..3514327,3517091..3517186,3526230..3526430,3592215..3592238))
location: region:3490012-3592238:-1
so has part: feature:3592215-3592238:-1:exon
so has part: feature:3526230-3526430:-1:exon
so has part: feature:3517091-3517186:-1:exon
so has part: feature:3514026-3514327:-1:exon
so has part: feature:3508674-3508781:-1:exon
so has part: feature:3507873-3507996:-1:exon
so has part: feature:3506565-3506910:-1:exon
so has part: feature:3505092-3505191:-1:exon
so has part: feature:3502262-3502449:-1:exon
so has part: feature:3499707-3499800:-1:exon
so has part: feature:3499013-3499082:-1:exon
so has part: feature:3498144-3498233:-1:exon
so has part: feature:3497009-3497091:-1:exon
so has part: feature:3495157-3495301:-1:exon
so has part: feature:3494190-3494338:-1:exon
so has part: feature:3493346-3493432:-1:exon
so has part: feature:3491545-3491697:-1:exon
so has part: feature:3491168-3491282:-1:exon
so has part: feature:3490428-3490531:-1:exon
so has part: feature:3490012-3490156:-1:exon

XP_048219628.1
type: Protein
SIO_000068: ncbiprotein

position:3490012:-1
position: 3490012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3592238:-1
position: 3592238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3592215-3592238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3526230-3526430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3517091-3517186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3514026-3514327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3508674-3508781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3507873-3507996:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3506565-3506910:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3505092-3505191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3502262-3502449:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3499707-3499800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3499013-3499082:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3498144-3498233:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3497009-3497091:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3495157-3495301:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3494190-3494338:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3493346-3493432:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3491545-3491697:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3491168-3491282:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3490428-3490531:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3490012-3490156:-1:exon

Lpin2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Lpin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate phosphatase LPIN2 isoform X2
translation: MPLLISSGEKGLRHFEQISLSQTMNYVGQLAGQVLVTVKELYKGINQATLSGCIDVVVVRQQDGTYQCSPFHVRFGKLGVLRSKEKVIDIEINGNAVDLHMKLGDNGEAFFVEETGEEYEKLPAYLATSPIPTEDKFFKDIDTPLVRAGGDERASQSAAIAHILETETIFTPSSVKKKKRRRKKCKQDSKKEEQAASPGVEDACDVVVSSDDEKGAQAARGSANASLKEEEYKEPSLFHSGDHYPLSDGDWSPLESTYSQAVCPKSDSELEVKPAESLLRSESHMEWTWGGFPESTKVTKRERYDYHPWTATITPSENTHFRVIPSEDSLMREVEKDANVEETVCTIVKPKPRALCKQMSDTSSAVELLQPPLETPQISSMLDADHLSRPSLAEAPSEPKPATKVDSPSKKKGVHKRSQHQGPDDIYLEDLKALEPEVAALYFPKSEADPGSRQWPESDTLSGSQSPQSVGSAAADSGTECLSDSAMDLPDVTLSLCGGLSENGEISKEKFMEHIITYHEFAENPGLIDNPNLVIRIYNRYYNWALAAPMILSLQVFQKSLPKATLESWVKDKMPKKSGRWWFWRKRESMTKQLPAAKEGKSEMPPTSELQSDPKEPASARPAEDDTSSDEGSQELEETIKVDTLPTETLSHSSMTSYKKSLRLSSDQIAKLKLHDGPNDVVFSITTQYQGTCRCAGTIYLWNWNDKIIISDIDGTITKSDALGQILPQLGKDWTHQGIAKLYHSINENGYKFLYCSARAIGMADMTRGYLHWVNDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSKQPFYAAFGNRPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLNKEQNSAFLCPEFSSFCYWRDPIPDVDLDDLA
SIO_010081: Lpin2
subclass of: SO_0000673
so part of: Lpin2
location: complement(join(3490012..3490156,3490428..3490531,3491168..3491282,3491545..3491697,3493346..3493432,3494190..3494338,3495157..3495301,3497009..3497091,3498144..3498233,3499013..3499082,3499707..3499800,3502262..3502449,3505092..3505191,3506565..3506910,3507873..3507996,3508674..3508781,3514026..3514327,3517091..3517186,3526230..3526430,3552276..3552335))
location: region:3490012-3552335:-1
so has part: feature:3552276-3552335:-1:exon
so has part: feature:3526230-3526430:-1:exon
so has part: feature:3517091-3517186:-1:exon
so has part: feature:3514026-3514327:-1:exon
so has part: feature:3508674-3508781:-1:exon
so has part: feature:3507873-3507996:-1:exon
so has part: feature:3506565-3506910:-1:exon
so has part: feature:3505092-3505191:-1:exon
so has part: feature:3502262-3502449:-1:exon
so has part: feature:3499707-3499800:-1:exon
so has part: feature:3499013-3499082:-1:exon
so has part: feature:3498144-3498233:-1:exon
so has part: feature:3497009-3497091:-1:exon
so has part: feature:3495157-3495301:-1:exon
so has part: feature:3494190-3494338:-1:exon
so has part: feature:3493346-3493432:-1:exon
so has part: feature:3491545-3491697:-1:exon
so has part: feature:3491168-3491282:-1:exon
so has part: feature:3490428-3490531:-1:exon
so has part: feature:3490012-3490156:-1:exon

XP_048219627.1
type: Protein
SIO_000068: ncbiprotein

position:3552335:-1
position: 3552335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3552276-3552335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3526230-3526430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3517091-3517186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3514026-3514327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3508674-3508781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3507873-3507996:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3506565-3506910:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3505092-3505191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3502262-3502449:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3499707-3499800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3499013-3499082:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3498144-3498233:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3497009-3497091:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3495157-3495301:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3494190-3494338:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3493346-3493432:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3491545-3491697:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3491168-3491282:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3490428-3490531:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3490012-3490156:-1:exon

Lpin2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Lpin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate phosphatase LPIN2 isoform X1
translation: MFYLEDDSEEWKGQESSLSRTRGVYHGKAPPNILSQTMNYVGQLAGQVLVTVKELYKGINQATLSGCIDVVVVRQQDGTYQCSPFHVRFGKLGVLRSKEKVIDIEINGNAVDLHMKLGDNGEAFFVEETGEEYEKLPAYLATSPIPTEDKFFKDIDTPLVRAGGDERASQSAAIAHILETETIFTPSSVKKKKRRRKKCKQDSKKEEQAASPGVEDACDVVVSSDDEKGAQAARGSANASLKEEEYKEPSLFHSGDHYPLSDGDWSPLESTYSQAVCPKSDSELEVKPAESLLRSESHMEWTWGGFPESTKVTKRERYDYHPWTATITPSENTHFRVIPSEDSLMREVEKDANVEETVCTIVKPKPRALCKQMSDTSSAVELLQPPLETPQISSMLDADHLSRPSLAEAPSEPKPATKVDSPSKKKGVHKRSQHQGPDDIYLEDLKALEPEVAALYFPKSEADPGSRQWPESDTLSGSQSPQSVGSAAADSGTECLSDSAMDLPDVTLSLCGGLSENGEISKEKFMEHIITYHEFAENPGLIDNPNLVIRIYNRYYNWALAAPMILSLQVFQKSLPKATLESWVKDKMPKKSGRWWFWRKRESMTKQLPAAKEGKSEMPPTSELQSDPKEPASARPAEDDTSSDEGSQELEETIKVDTLPTETLSHSSMTSYKKSLRLSSDQIAKLKLHDGPNDVVFSITTQYQGTCRCAGTIYLWNWNDKIIISDIDGTITKSDALGQILPQLGKDWTHQGIAKLYHSINENGYKFLYCSARAIGMADMTRGYLHWVNDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSKQPFYAAFGNRPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLNKEQNSAFLCPEFSSFCYWRDPIPDVDLDDLA
SIO_010081: Lpin2
subclass of: SO_0000673
so part of: Lpin2
location: complement(join(3490012..3490156,3490428..3490531,3491168..3491282,3491545..3491697,3493346..3493432,3494190..3494338,3495157..3495301,3497009..3497091,3498144..3498233,3499013..3499082,3499707..3499800,3502262..3502449,3505092..3505191,3506565..3506910,3507873..3507996,3508674..3508781,3514026..3514327,3517091..3517186,3526230..3526430,3552001..3552102))
location: region:3490012-3552102:-1
so has part: feature:3552001-3552102:-1:exon
so has part: feature:3526230-3526430:-1:exon
so has part: feature:3517091-3517186:-1:exon
so has part: feature:3514026-3514327:-1:exon
so has part: feature:3508674-3508781:-1:exon
so has part: feature:3507873-3507996:-1:exon
so has part: feature:3506565-3506910:-1:exon
so has part: feature:3505092-3505191:-1:exon
so has part: feature:3502262-3502449:-1:exon
so has part: feature:3499707-3499800:-1:exon
so has part: feature:3499013-3499082:-1:exon
so has part: feature:3498144-3498233:-1:exon
so has part: feature:3497009-3497091:-1:exon
so has part: feature:3495157-3495301:-1:exon
so has part: feature:3494190-3494338:-1:exon
so has part: feature:3493346-3493432:-1:exon
so has part: feature:3491545-3491697:-1:exon
so has part: feature:3491168-3491282:-1:exon
so has part: feature:3490428-3490531:-1:exon
so has part: feature:3490012-3490156:-1:exon

XP_048219626.1
type: Protein
SIO_000068: ncbiprotein

position:3552102:-1
position: 3552102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3552001-3552102:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3526230-3526430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3517091-3517186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3514026-3514327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3508674-3508781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3507873-3507996:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3506565-3506910:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3505092-3505191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3502262-3502449:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3499707-3499800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3499013-3499082:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3498144-3498233:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3497009-3497091:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3495157-3495301:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3494190-3494338:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3493346-3493432:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3491545-3491697:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3491168-3491282:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3490428-3490531:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3490012-3490156:-1:exon

Lpin2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Lpin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate phosphatase LPIN2 isoform X4
translation: MNYVGQLAGQVLVTVKELYKGINQATLSGCIDVVVVRQQDGTYQCSPFHVRFGKLGVLRSKEKVIDIEINGNAVDLHMKLGDNGEAFFVEETGEEYEKLPAYLATSPIPTEDKFFKDIDTPLVRAGGDERASQSAAIAHILETETIFTPSSVKKKKRRRKKCKQDSKKEEQAASPGVEDACDVVVSSDDEKGAQAARGSANASLKEEEYKEPSLFHSGDHYPLSDGDWSPLESTYSQAVCPKSDSELEVKPAESLLRSESHMEWTWGGFPESTKVTKRERYDYHPWTATITPSENTHFRVIPSEDSLMREVEKDANVEETVCTIVKPKPRALCKQMSDTSSAVELLQPPLETPQISSMLDADHLSRPSLAEAPSEPKPATKVDSPSKKKGVHKRSQHQGPDDIYLEDLKALEPEVAALYFPKSEADPGSRQWPESDTLSGSQSPQSVGSAAADSGTECLSDSAMDLPDVTLSLCGGLSENGEISKEKFMEHIITYHEFAENPGLIDNPNLVIRIYNRYYNWALAAPMILSLQVFQKSLPKATLESWVKDKMPKKSGRWWFWRKRESMTKQLPAAKEGKSEMPPTSELQSDPKEPASARPAEDDTSSDEGSQELEETIKVDTLPTETLSHSSMTSYKKSLRLSSDQIAKLKLHDGPNDVVFSITTQYQGTCRCAGTIYLWNWNDKIIISDIDGTITKSDALGQILPQLGKDWTHQGIAKLYHSINENGYKFLYCSARAIGMADMTRGYLHWVNDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSKQPFYAAFGNRPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLNKEQNSAFLCPEFSSFCYWRDPIPDVDLDDLA
SIO_010081: Lpin2
subclass of: SO_0000673
so part of: Lpin2
location: complement(join(3490012..3490156,3490428..3490531,3491168..3491282,3491545..3491697,3493346..3493432,3494190..3494338,3495157..3495301,3497009..3497091,3498144..3498233,3499013..3499082,3499707..3499800,3502262..3502449,3505092..3505191,3506565..3506910,3507873..3507996,3508674..3508781,3514026..3514327,3517091..3517186,3526230..3526421))
location: region:3490012-3526421:-1
so has part: feature:3526230-3526421:-1:exon
so has part: feature:3517091-3517186:-1:exon
so has part: feature:3514026-3514327:-1:exon
so has part: feature:3508674-3508781:-1:exon
so has part: feature:3507873-3507996:-1:exon
so has part: feature:3506565-3506910:-1:exon
so has part: feature:3505092-3505191:-1:exon
so has part: feature:3502262-3502449:-1:exon
so has part: feature:3499707-3499800:-1:exon
so has part: feature:3499013-3499082:-1:exon
so has part: feature:3498144-3498233:-1:exon
so has part: feature:3497009-3497091:-1:exon
so has part: feature:3495157-3495301:-1:exon
so has part: feature:3494190-3494338:-1:exon
so has part: feature:3493346-3493432:-1:exon
so has part: feature:3491545-3491697:-1:exon
so has part: feature:3491168-3491282:-1:exon
so has part: feature:3490428-3490531:-1:exon
so has part: feature:3490012-3490156:-1:exon

XP_048219629.1
type: Protein
SIO_000068: ncbiprotein

position:3526421:-1
position: 3526421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3526230-3526421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3517091-3517186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3514026-3514327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3508674-3508781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3507873-3507996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3506565-3506910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3505092-3505191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3502262-3502449:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3499707-3499800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3499013-3499082:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3498144-3498233:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3497009-3497091:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3495157-3495301:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3494190-3494338:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3493346-3493432:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3491545-3491697:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3491168-3491282:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3490428-3490531:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3490012-3490156:-1:exon

Lpin2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Lpin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate phosphatase LPIN2 isoform X4
translation: MNYVGQLAGQVLVTVKELYKGINQATLSGCIDVVVVRQQDGTYQCSPFHVRFGKLGVLRSKEKVIDIEINGNAVDLHMKLGDNGEAFFVEETGEEYEKLPAYLATSPIPTEDKFFKDIDTPLVRAGGDERASQSAAIAHILETETIFTPSSVKKKKRRRKKCKQDSKKEEQAASPGVEDACDVVVSSDDEKGAQAARGSANASLKEEEYKEPSLFHSGDHYPLSDGDWSPLESTYSQAVCPKSDSELEVKPAESLLRSESHMEWTWGGFPESTKVTKRERYDYHPWTATITPSENTHFRVIPSEDSLMREVEKDANVEETVCTIVKPKPRALCKQMSDTSSAVELLQPPLETPQISSMLDADHLSRPSLAEAPSEPKPATKVDSPSKKKGVHKRSQHQGPDDIYLEDLKALEPEVAALYFPKSEADPGSRQWPESDTLSGSQSPQSVGSAAADSGTECLSDSAMDLPDVTLSLCGGLSENGEISKEKFMEHIITYHEFAENPGLIDNPNLVIRIYNRYYNWALAAPMILSLQVFQKSLPKATLESWVKDKMPKKSGRWWFWRKRESMTKQLPAAKEGKSEMPPTSELQSDPKEPASARPAEDDTSSDEGSQELEETIKVDTLPTETLSHSSMTSYKKSLRLSSDQIAKLKLHDGPNDVVFSITTQYQGTCRCAGTIYLWNWNDKIIISDIDGTITKSDALGQILPQLGKDWTHQGIAKLYHSINENGYKFLYCSARAIGMADMTRGYLHWVNDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSKQPFYAAFGNRPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLNKEQNSAFLCPEFSSFCYWRDPIPDVDLDDLA
SIO_010081: Lpin2
subclass of: SO_0000673
so part of: Lpin2
location: complement(join(3490012..3490156,3490428..3490531,3491168..3491282,3491545..3491697,3493346..3493432,3494190..3494338,3495157..3495301,3497009..3497091,3498144..3498233,3499013..3499082,3499707..3499800,3502262..3502449,3505092..3505191,3506565..3506910,3507873..3507996,3508674..3508781,3514026..3514327,3517091..3517186,3526230..3526421))
location: region:3490012-3526421:-1
so has part: feature:3526230-3526421:-1:exon
so has part: feature:3517091-3517186:-1:exon
so has part: feature:3514026-3514327:-1:exon
so has part: feature:3508674-3508781:-1:exon
so has part: feature:3507873-3507996:-1:exon
so has part: feature:3506565-3506910:-1:exon
so has part: feature:3505092-3505191:-1:exon
so has part: feature:3502262-3502449:-1:exon
so has part: feature:3499707-3499800:-1:exon
so has part: feature:3499013-3499082:-1:exon
so has part: feature:3498144-3498233:-1:exon
so has part: feature:3497009-3497091:-1:exon
so has part: feature:3495157-3495301:-1:exon
so has part: feature:3494190-3494338:-1:exon
so has part: feature:3493346-3493432:-1:exon
so has part: feature:3491545-3491697:-1:exon
so has part: feature:3491168-3491282:-1:exon
so has part: feature:3490428-3490531:-1:exon
so has part: feature:3490012-3490156:-1:exon

XP_048219630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3526230-3526421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3517091-3517186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3514026-3514327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3508674-3508781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3507873-3507996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3506565-3506910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3505092-3505191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3502262-3502449:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3499707-3499800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3499013-3499082:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3498144-3498233:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3497009-3497091:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3495157-3495301:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3494190-3494338:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3493346-3493432:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3491545-3491697:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3491168-3491282:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3490428-3490531:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3490012-3490156:-1:exon

LOC125364212
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3539205..3540742
location: region:3539205-3540742:1
so has part: feature:3539205-3540742:1:exon

125364212
type: Gene
SIO_000068: ncbigene

position:3539205:1
position: 3539205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3540742:1
position: 3540742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3539205-3540742:1:exon

LOC125364212
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125364212
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125364212
subclass of: SO_0000673
so part of: LOC125364212
location: 3539205..3540742
location: region:3539205-3540742:1
so has part: feature:3539205-3540742:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3539205-3540742:1:exon

Myom1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Myom1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3620624..3779356)
location: region:3620624-3779356:-1
so has part: feature:3620624-3779356:-1:exon
subclass of: SO_0000010

125364185
type: Gene
SIO_000068: ncbigene

position:3620624:-1
position: 3620624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3779356:-1
position: 3779356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3620624-3779356:-1:exon

Myom1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Myom1
product: myomesin 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363644.1
SIO_010081: Myom1
subclass of: SO_0000673
so part of: Myom1
location: complement(join(3620624..3621436,3623375..3623430,3625610..3625632,3625885..3625921,3629339..3629502,3633960..3634065,3634159..3634197,3635519..3635606,3636484..3636597,3642023..3642090,3642355..3642414,3643630..3643774,3646661..3646797,3652544..3652588,3652707..3652813,3653702..3653858,3665879..3665993,3668385..3668569,3671234..3671360,3676757..3676953,3680354..3680641,3682072..3682193,3685301..3685475,3687348..3687531,3688451..3688575,3690714..3690770,3693502..3693701,3696740..3696881,3710995..3711156,3713488..3713652,3715817..3715873,3715990..3716078,3718045..3718137,3725289..3725446,3726018..3726267,3727392..3727532,3745768..3746105,3778951..3779356))
location: region:3620624-3779356:-1
so has part: feature:3778951-3779356:-1:exon
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so has part: feature:3713488-3713652:-1:exon
so has part: feature:3710995-3711156:-1:exon
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so has part: feature:3693502-3693701:-1:exon
so has part: feature:3690714-3690770:-1:exon
so has part: feature:3688451-3688575:-1:exon
so has part: feature:3687348-3687531:-1:exon
so has part: feature:3685301-3685475:-1:exon
so has part: feature:3682072-3682193:-1:exon
so has part: feature:3680354-3680641:-1:exon
so has part: feature:3676757-3676953:-1:exon
so has part: feature:3671234-3671360:-1:exon
so has part: feature:3668385-3668569:-1:exon
so has part: feature:3665879-3665993:-1:exon
so has part: feature:3653702-3653858:-1:exon
so has part: feature:3652707-3652813:-1:exon
so has part: feature:3652544-3652588:-1:exon
so has part: feature:3646661-3646797:-1:exon
so has part: feature:3643630-3643774:-1:exon
so has part: feature:3642355-3642414:-1:exon
so has part: feature:3642023-3642090:-1:exon
so has part: feature:3636484-3636597:-1:exon
so has part: feature:3635519-3635606:-1:exon
so has part: feature:3634159-3634197:-1:exon
so has part: feature:3633960-3634065:-1:exon
so has part: feature:3629339-3629502:-1:exon
so has part: feature:3625885-3625921:-1:exon
so has part: feature:3625610-3625632:-1:exon
so has part: feature:3623375-3623430:-1:exon
so has part: feature:3620624-3621436:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3778951-3779356:-1:exon

position:3778951:-1
position: 3778951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3745768-3746105:-1:exon

position:3745768:-1
position: 3745768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3746105:-1
position: 3746105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3727392-3727532:-1:exon

position:3727392:-1
position: 3727392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3727532:-1
position: 3727532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3726018-3726267:-1:exon

position:3726018:-1
position: 3726018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3726267:-1
position: 3726267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3725289-3725446:-1:exon

position:3725289:-1
position: 3725289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3725446:-1
position: 3725446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3718045-3718137:-1:exon

position:3718045:-1
position: 3718045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3718137:-1
position: 3718137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3715990-3716078:-1:exon

position:3715990:-1
position: 3715990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3716078:-1
position: 3716078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3715817-3715873:-1:exon

position:3715817:-1
position: 3715817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3715873:-1
position: 3715873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3713488-3713652:-1:exon

position:3713488:-1
position: 3713488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3713652:-1
position: 3713652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3710995-3711156:-1:exon

position:3710995:-1
position: 3710995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3711156:-1
position: 3711156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3696740-3696881:-1:exon

position:3696740:-1
position: 3696740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3696881:-1
position: 3696881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3693502-3693701:-1:exon

position:3693502:-1
position: 3693502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3693701:-1
position: 3693701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3690714-3690770:-1:exon

position:3690714:-1
position: 3690714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3690770:-1
position: 3690770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3688451-3688575:-1:exon

position:3688451:-1
position: 3688451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3688575:-1
position: 3688575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3687348-3687531:-1:exon

position:3687348:-1
position: 3687348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3687531:-1
position: 3687531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3685301-3685475:-1:exon

position:3685301:-1
position: 3685301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3685475:-1
position: 3685475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3682072-3682193:-1:exon

position:3682072:-1
position: 3682072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3682193:-1
position: 3682193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3680354-3680641:-1:exon

position:3680354:-1
position: 3680354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3680641:-1
position: 3680641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3676757-3676953:-1:exon

position:3676757:-1
position: 3676757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3676953:-1
position: 3676953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3671234-3671360:-1:exon

position:3671234:-1
position: 3671234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3671360:-1
position: 3671360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3668385-3668569:-1:exon

position:3668385:-1
position: 3668385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3668569:-1
position: 3668569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3665879-3665993:-1:exon

position:3665879:-1
position: 3665879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3665993:-1
position: 3665993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3653702-3653858:-1:exon

position:3653702:-1
position: 3653702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3653858:-1
position: 3653858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3652707-3652813:-1:exon

position:3652707:-1
position: 3652707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3652813:-1
position: 3652813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3652544-3652588:-1:exon

position:3652544:-1
position: 3652544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3652588:-1
position: 3652588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3646661-3646797:-1:exon

position:3646661:-1
position: 3646661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3646797:-1
position: 3646797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3643630-3643774:-1:exon

position:3643630:-1
position: 3643630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3643774:-1
position: 3643774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3642355-3642414:-1:exon

position:3642355:-1
position: 3642355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3642414:-1
position: 3642414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3642023-3642090:-1:exon

position:3642023:-1
position: 3642023
reference: sequence
type: ReverseStrandPosition
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position:3642090:-1
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reference: sequence
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urn:…
SIO_000300: 30
SIO_000628: feature:3636484-3636597:-1:exon

position:3636484:-1
position: 3636484
reference: sequence
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position:3636597:-1
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reference: sequence
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urn:…
SIO_000300: 31
SIO_000628: feature:3635519-3635606:-1:exon

position:3635519:-1
position: 3635519
reference: sequence
type: ReverseStrandPosition
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position:3635606:-1
position: 3635606
reference: sequence
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urn:…
SIO_000300: 32
SIO_000628: feature:3634159-3634197:-1:exon

position:3634159:-1
position: 3634159
reference: sequence
type: ReverseStrandPosition
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position:3634197:-1
position: 3634197
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 33
SIO_000628: feature:3633960-3634065:-1:exon

position:3633960:-1
position: 3633960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3634065:-1
position: 3634065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:3629339-3629502:-1:exon

position:3629339:-1
position: 3629339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3629502:-1
position: 3629502
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 35
SIO_000628: feature:3625885-3625921:-1:exon

position:3625885:-1
position: 3625885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3625921:-1
position: 3625921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:3625610-3625632:-1:exon

position:3625610:-1
position: 3625610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3625632:-1
position: 3625632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:3623375-3623430:-1:exon

position:3623375:-1
position: 3623375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3623430:-1
position: 3623430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:3620624-3621436:-1:exon

position:3621436:-1
position: 3621436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Myom1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Myom1
product: myomesin 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363645.1
SIO_010081: Myom1
subclass of: SO_0000673
so part of: Myom1
location: complement(join(3620624..3621436,3623375..3623430,3625610..3625632,3625885..3625921,3629339..3629502,3633960..3634065,3634159..3634197,3635519..3635606,3636484..3636597,3642023..3642090,3642355..3642414,3643630..3643774,3646661..3646797,3652544..3652588,3652707..3652813,3653702..3653858,3665879..3665993,3668385..3668569,3671234..3671360,3676757..3676953,3680354..3680641,3682072..3682193,3685301..3685475,3687348..3687531,3688451..3688575,3690714..3690770,3693502..3693701,3696740..3696881,3710995..3711156,3713488..3713652,3715817..3715873,3715990..3716078,3718045..3718137,3725289..3725446,3726018..3726267,3727392..3727532,3745768..3746105,3750416..3750648))
location: region:3620624-3750648:-1
so has part: feature:3750416-3750648:-1:exon
so has part: feature:3745768-3746105:-1:exon
so has part: feature:3727392-3727532:-1:exon
so has part: feature:3726018-3726267:-1:exon
so has part: feature:3725289-3725446:-1:exon
so has part: feature:3718045-3718137:-1:exon
so has part: feature:3715990-3716078:-1:exon
so has part: feature:3715817-3715873:-1:exon
so has part: feature:3713488-3713652:-1:exon
so has part: feature:3710995-3711156:-1:exon
so has part: feature:3696740-3696881:-1:exon
so has part: feature:3693502-3693701:-1:exon
so has part: feature:3690714-3690770:-1:exon
so has part: feature:3688451-3688575:-1:exon
so has part: feature:3687348-3687531:-1:exon
so has part: feature:3685301-3685475:-1:exon
so has part: feature:3682072-3682193:-1:exon
so has part: feature:3680354-3680641:-1:exon
so has part: feature:3676757-3676953:-1:exon
so has part: feature:3671234-3671360:-1:exon
so has part: feature:3668385-3668569:-1:exon
so has part: feature:3665879-3665993:-1:exon
so has part: feature:3653702-3653858:-1:exon
so has part: feature:3652707-3652813:-1:exon
so has part: feature:3652544-3652588:-1:exon
so has part: feature:3646661-3646797:-1:exon
so has part: feature:3643630-3643774:-1:exon
so has part: feature:3642355-3642414:-1:exon
so has part: feature:3642023-3642090:-1:exon
so has part: feature:3636484-3636597:-1:exon
so has part: feature:3635519-3635606:-1:exon
so has part: feature:3634159-3634197:-1:exon
so has part: feature:3633960-3634065:-1:exon
so has part: feature:3629339-3629502:-1:exon
so has part: feature:3625885-3625921:-1:exon
so has part: feature:3625610-3625632:-1:exon
so has part: feature:3623375-3623430:-1:exon
so has part: feature:3620624-3621436:-1:exon

position:3750648:-1
position: 3750648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3750416-3750648:-1:exon

position:3750416:-1
position: 3750416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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urn:…
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SIO_000628: feature:3688451-3688575:-1:exon

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urn:…
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SIO_000628: feature:3671234-3671360:-1:exon

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SIO_000628: feature:3668385-3668569:-1:exon

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SIO_000628: feature:3653702-3653858:-1:exon

urn:…
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SIO_000628: feature:3652707-3652813:-1:exon

urn:…
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SIO_000628: feature:3652544-3652588:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3646661-3646797:-1:exon

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SIO_000628: feature:3642355-3642414:-1:exon

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SIO_000628: feature:3642023-3642090:-1:exon

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SIO_000300: 30
SIO_000628: feature:3636484-3636597:-1:exon

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SIO_000300: 31
SIO_000628: feature:3635519-3635606:-1:exon

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SIO_000300: 32
SIO_000628: feature:3634159-3634197:-1:exon

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SIO_000300: 33
SIO_000628: feature:3633960-3634065:-1:exon

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SIO_000628: feature:3629339-3629502:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3625885-3625921:-1:exon

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SIO_000300: 36
SIO_000628: feature:3625610-3625632:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:3623375-3623430:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:3620624-3621436:-1:exon

Myom1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Myom1
product: myomesin 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363646.1
SIO_010081: Myom1
subclass of: SO_0000673
so part of: Myom1
location: complement(join(3620624..3621436,3623375..3623430,3625610..3625632,3625885..3625921,3629339..3629502,3633960..3634065,3634159..3634197,3635519..3635606,3636484..3636597,3642023..3642090,3642355..3642414,3643630..3643774,3646661..3646797,3652544..3652588,3652707..3652813,3653702..3653858,3665879..3665993,3668385..3668569,3671234..3671360,3676757..3676953,3682072..3682193,3685301..3685475,3687348..3687531,3688451..3688575,3690714..3690770,3693502..3693701,3696740..3696881,3710995..3711156,3713488..3713652,3715817..3715873,3715990..3716078,3718045..3718137,3725289..3725446,3726018..3726267,3727392..3727532,3745768..3746105))
location: region:3620624-3746105:-1
so has part: feature:3745768-3746105:-1:exon
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so has part: feature:3725289-3725446:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:3745768-3746105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3727392-3727532:-1:exon

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SIO_000300: 3
SIO_000628: feature:3726018-3726267:-1:exon

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SIO_000300: 4
SIO_000628: feature:3725289-3725446:-1:exon

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SIO_000300: 5
SIO_000628: feature:3718045-3718137:-1:exon

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SIO_000628: feature:3715990-3716078:-1:exon

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SIO_000300: 7
SIO_000628: feature:3715817-3715873:-1:exon

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SIO_000300: 8
SIO_000628: feature:3713488-3713652:-1:exon

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SIO_000628: feature:3710995-3711156:-1:exon

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SIO_000628: feature:3693502-3693701:-1:exon

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SIO_000628: feature:3690714-3690770:-1:exon

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SIO_000628: feature:3688451-3688575:-1:exon

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SIO_000300: 14
SIO_000628: feature:3687348-3687531:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3685301-3685475:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3682072-3682193:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3676757-3676953:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3671234-3671360:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3668385-3668569:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3665879-3665993:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3653702-3653858:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3652707-3652813:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3652544-3652588:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3646661-3646797:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3643630-3643774:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3642355-3642414:-1:exon

urn:…
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SIO_000628: feature:3642023-3642090:-1:exon

urn:…
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SIO_000628: feature:3636484-3636597:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3635519-3635606:-1:exon

urn:…
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urn:…
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SIO_000628: feature:3633960-3634065:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3629339-3629502:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3625885-3625921:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3625610-3625632:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3623375-3623430:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:3620624-3621436:-1:exon

Myom1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Myom1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myomesin-1 isoform X1
translation: MAPRTMSHPAHFLQATENQTLQIGKEMDTLSKLESCFTGVVSFPQGHMMSLPFYQKSHQHYDLSYRNKDLRTTMSHYQQEKKRSAIYTHGSTAYSSRSSAAHRQEAEASRQMSASSYQQQASQAYSLGATQHSSSEVSRKATAAYDYGYSHGLTDSSLLLEDYSSKLSPKTKRAKHSLLSGEEKENLASDYMVPIFSGRQVHVSGIADTEEERIKEAAAYIAQRNLLAREEGLVTSKQSRTSRQGKVSEQALAILQQEEAFEKKSRKVAIREKAEQLSLRKTLEETQTYHGKLNEDHLLHAPEFIIKPRSHTVWEKENVKIHCSVAGWPEPRVTWYKNQVPINVHANPGKYIIESRYGMHTLEIDTCDFEDTAQYRASAMNVKGELSAYASIVVKRYKGELDETRFHASTMPFSFAVTPFGYASKFDIHFDDKFDVSFGREGETMSLGCQVVITPEIKHFQPEVQWYRNGAPVSSSKWVQTHWSGDRATLTFSHLNKEDEGLYTIRVRMGEYYEQYSAYVFVRDADAEIEGAPAAPLDVVSLDANKDYIIISWKQPAVDGGSPILGYFIDKCEVGTDCWSQCNDTPVKFARFPVTGLIEGRSYLFRVRAVNKTGIGLPSRVSEPVAALDPSEKARLKSRPSAPWTGQIIVTEEEPTEGIVPGPPTDLSVTEATQSYVVLSWKPPGQRGHEGIMYFVEKCDAGTENWQRVNTELPVKSPRFALFDLAEGKAYRFRVRCSNSAGVGEPSEPTEVTIVGDKLDIPKAPGKIIPSRNTDTSVVVSWEESKDATELVGYYIESSVVGSGKWEPCNNNPVKGSRFTCHGLATGQNYIFRVRAVNAAGLSEYSQDSEAIEVKAAIGGGVSPDMCSQLTDVPGRLTDSRGGVHGASLPALQKDALLSSKPNKPSPSSPSSLGHPEVNKVSETVQEELTPSPPEAAPKGQSKSDSLKKKKDLVEVPSPPSDITCLESFRDSMVLGWKQPVKTGGAEITGYYVNYREVTDGVPGKWREANIKAVSDAAYKISDLKENVVYQFQVSAMNIAGLGAPSAVSKCFKCEEWTIAVPGPPHSLQYSEVRKNSLVLQWKPPVYTGRTPVTGYFVDLKETSGKDDQWRGLNKAAIQNKYLKVDGLKEGISYVFRVRAINQAGVGKPSDLAGPVVAETRPGTKEVVVNVDDDGIISLNFECDQMTPKSEFTWSKDYVSTEDSARLEVESKGNKTKLTFKDLGTDDLGIYSCDVTDTDGIASSYLIDEAEMKRLLALSQEHKFPTVPSKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQIQDGKATGHSTLVLIGDVYKKLQKEAEFQRQEWIRKQGPHFAEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGFYEVILKDDRGKDKSRLKLVDEAFKELMTEVCRKIALSATDLKIQSTAEGIRLYSFVTYYLDDLKVNWSHNGTDIKFTDRVKSGVTGEQIWLQISEPTPNDKGKYVMELFDGKTGHQRTVDLSGQAFDEAFAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCTVWGDPTPEVSWLKNEKPLVSDDHCNLRFESGKTAFFTISGVSTADSGKYGLVVKNKYGSETSDFTVSVFIPEEEARKAPAEPQKGNKKSK
SIO_010081: Myom1
subclass of: SO_0000673
so part of: Myom1
location: complement(join(3621143..3621436,3623375..3623430,3625610..3625632,3625885..3625921,3629339..3629502,3633960..3634065,3634159..3634197,3635519..3635606,3636484..3636597,3642023..3642090,3642355..3642414,3643630..3643774,3646661..3646797,3652544..3652588,3652707..3652813,3653702..3653858,3665879..3665993,3668385..3668569,3671234..3671360,3676757..3676953,3680354..3680641,3682072..3682193,3685301..3685475,3687348..3687531,3688451..3688575,3690714..3690770,3693502..3693701,3696740..3696881,3710995..3711156,3713488..3713652,3715817..3715873,3715990..3716078,3718045..3718137,3725289..3725446,3726018..3726267,3727392..3727532,3745768..3746105,3778951..3779067))
location: region:3621143-3779067:-1
so has part: feature:3778951-3779067:-1:exon
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so has part: feature:3634159-3634197:-1:exon
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so has part: feature:3629339-3629502:-1:exon
so has part: feature:3625885-3625921:-1:exon
so has part: feature:3625610-3625632:-1:exon
so has part: feature:3623375-3623430:-1:exon
so has part: feature:3621143-3621436:-1:exon

XP_048219601.1
type: Protein
SIO_000068: ncbiprotein

position:3621143:-1
position: 3621143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3779067:-1
position: 3779067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3778951-3779067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3745768-3746105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3727392-3727532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3726018-3726267:-1:exon

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SIO_000300: 5
SIO_000628: feature:3725289-3725446:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3718045-3718137:-1:exon

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SIO_000628: feature:3715990-3716078:-1:exon

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SIO_000628: feature:3715817-3715873:-1:exon

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SIO_000300: 9
SIO_000628: feature:3713488-3713652:-1:exon

urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
SIO_000628: feature:3696740-3696881:-1:exon

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SIO_000300: 12
SIO_000628: feature:3693502-3693701:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3690714-3690770:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3688451-3688575:-1:exon

urn:…
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SIO_000628: feature:3687348-3687531:-1:exon

urn:…
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SIO_000628: feature:3685301-3685475:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3682072-3682193:-1:exon

urn:…
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SIO_000628: feature:3680354-3680641:-1:exon

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SIO_000628: feature:3676757-3676953:-1:exon

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SIO_000628: feature:3671234-3671360:-1:exon

urn:…
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SIO_000628: feature:3665879-3665993:-1:exon

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SIO_000628: feature:3653702-3653858:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3652707-3652813:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3652544-3652588:-1:exon

urn:…
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SIO_000628: feature:3646661-3646797:-1:exon

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SIO_000628: feature:3643630-3643774:-1:exon

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SIO_000628: feature:3642355-3642414:-1:exon

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SIO_000300: 29
SIO_000628: feature:3642023-3642090:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3636484-3636597:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3635519-3635606:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3634159-3634197:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3633960-3634065:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3629339-3629502:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3625885-3625921:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:3625610-3625632:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:3623375-3623430:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:3621143-3621436:-1:exon

Myom1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Myom1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myomesin-1 isoform X3
translation: MMSLPFYQKSHQHYDLSYRNKDLRTTMSHYQQEKKRSAIYTHGSTAYSSRSSAAHRQEAEASRQMSASSYQQQASQAYSLGATQHSSSEVSRKATAAYDYGYSHGLTDSSLLLEDYSSKLSPKTKRAKHSLLSGEEKENLASDYMVPIFSGRQVHVSGIADTEEERIKEAAAYIAQRNLLAREEGLVTSKQSRTSRQGKVSEQALAILQQEEAFEKKSRKVAIREKAEQLSLRKTLEETQTYHGKLNEDHLLHAPEFIIKPRSHTVWEKENVKIHCSVAGWPEPRVTWYKNQVPINVHANPGKYIIESRYGMHTLEIDTCDFEDTAQYRASAMNVKGELSAYASIVVKRYKGELDETRFHASTMPFSFAVTPFGYASKFDIHFDDKFDVSFGREGETMSLGCQVVITPEIKHFQPEVQWYRNGAPVSSSKWVQTHWSGDRATLTFSHLNKEDEGLYTIRVRMGEYYEQYSAYVFVRDADAEIEGAPAAPLDVVSLDANKDYIIISWKQPAVDGGSPILGYFIDKCEVGTDCWSQCNDTPVKFARFPVTGLIEGRSYLFRVRAVNKTGIGLPSRVSEPVAALDPSEKARLKSRPSAPWTGQIIVTEEEPTEGIVPGPPTDLSVTEATQSYVVLSWKPPGQRGHEGIMYFVEKCDAGTENWQRVNTELPVKSPRFALFDLAEGKAYRFRVRCSNSAGVGEPSEPTEVTIVGDKLDIPKAPGKIIPSRNTDTSVVVSWEESKDATELVGYYIESSVVGSGKWEPCNNNPVKGSRFTCHGLATGQNYIFRVRAVNAAGLSEYSQDSEAIEVKAAIEVPSPPSDITCLESFRDSMVLGWKQPVKTGGAEITGYYVNYREVTDGVPGKWREANIKAVSDAAYKISDLKENVVYQFQVSAMNIAGLGAPSAVSKCFKCEEWTIAVPGPPHSLQYSEVRKNSLVLQWKPPVYTGRTPVTGYFVDLKETSGKDDQWRGLNKAAIQNKYLKVDGLKEGISYVFRVRAINQAGVGKPSDLAGPVVAETRPGTKEVVVNVDDDGIISLNFECDQMTPKSEFTWSKDYVSTEDSARLEVESKGNKTKLTFKDLGTDDLGIYSCDVTDTDGIASSYLIDEAEMKRLLALSQEHKFPTVPSKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQIQDGKATGHSTLVLIGDVYKKLQKEAEFQRQEWIRKQGPHFAEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGFYEVILKDDRGKDKSRLKLVDEAFKELMTEVCRKIALSATDLKIQSTAEGIRLYSFVTYYLDDLKVNWSHNGTDIKFTDRVKSGVTGEQIWLQISEPTPNDKGKYVMELFDGKTGHQRTVDLSGQAFDEAFAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCTVWGDPTPEVSWLKNEKPLVSDDHCNLRFESGKTAFFTISGVSTADSGKYGLVVKNKYGSETSDFTVSVFIPEEEARKAPAEPQKGNKKSK
SIO_010081: Myom1
subclass of: SO_0000673
so part of: Myom1
location: complement(join(3621143..3621436,3623375..3623430,3625610..3625632,3625885..3625921,3629339..3629502,3633960..3634065,3634159..3634197,3635519..3635606,3636484..3636597,3642023..3642090,3642355..3642414,3643630..3643774,3646661..3646797,3652544..3652588,3652707..3652813,3653702..3653858,3665879..3665993,3668385..3668569,3671234..3671360,3676757..3676953,3682072..3682193,3685301..3685475,3687348..3687531,3688451..3688575,3690714..3690770,3693502..3693701,3696740..3696881,3710995..3711156,3713488..3713652,3715817..3715873,3715990..3716078,3718045..3718137,3725289..3725446,3726018..3726267,3727392..3727532,3745768..3746081))
location: region:3621143-3746081:-1
so has part: feature:3745768-3746081:-1:exon
so has part: feature:3727392-3727532:-1:exon
so has part: feature:3726018-3726267:-1:exon
so has part: feature:3725289-3725446:-1:exon
so has part: feature:3718045-3718137:-1:exon
so has part: feature:3715990-3716078:-1:exon
so has part: feature:3715817-3715873:-1:exon
so has part: feature:3713488-3713652:-1:exon
so has part: feature:3710995-3711156:-1:exon
so has part: feature:3696740-3696881:-1:exon
so has part: feature:3693502-3693701:-1:exon
so has part: feature:3690714-3690770:-1:exon
so has part: feature:3688451-3688575:-1:exon
so has part: feature:3687348-3687531:-1:exon
so has part: feature:3685301-3685475:-1:exon
so has part: feature:3682072-3682193:-1:exon
so has part: feature:3676757-3676953:-1:exon
so has part: feature:3671234-3671360:-1:exon
so has part: feature:3668385-3668569:-1:exon
so has part: feature:3665879-3665993:-1:exon
so has part: feature:3653702-3653858:-1:exon
so has part: feature:3652707-3652813:-1:exon
so has part: feature:3652544-3652588:-1:exon
so has part: feature:3646661-3646797:-1:exon
so has part: feature:3643630-3643774:-1:exon
so has part: feature:3642355-3642414:-1:exon
so has part: feature:3642023-3642090:-1:exon
so has part: feature:3636484-3636597:-1:exon
so has part: feature:3635519-3635606:-1:exon
so has part: feature:3634159-3634197:-1:exon
so has part: feature:3633960-3634065:-1:exon
so has part: feature:3629339-3629502:-1:exon
so has part: feature:3625885-3625921:-1:exon
so has part: feature:3625610-3625632:-1:exon
so has part: feature:3623375-3623430:-1:exon
so has part: feature:3621143-3621436:-1:exon

XP_048219603.1
type: Protein
SIO_000068: ncbiprotein

position:3746081:-1
position: 3746081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3745768-3746081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3727392-3727532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3726018-3726267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3725289-3725446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3718045-3718137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3715990-3716078:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3715817-3715873:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3713488-3713652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3710995-3711156:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3696740-3696881:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3693502-3693701:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3690714-3690770:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3688451-3688575:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3687348-3687531:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3685301-3685475:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3682072-3682193:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3676757-3676953:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3671234-3671360:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3668385-3668569:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3665879-3665993:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3653702-3653858:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3652707-3652813:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3652544-3652588:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3646661-3646797:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3643630-3643774:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3642355-3642414:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3642023-3642090:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3636484-3636597:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3635519-3635606:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3634159-3634197:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3633960-3634065:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3629339-3629502:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3625885-3625921:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3625610-3625632:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3623375-3623430:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:3621143-3621436:-1:exon

Myom1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Myom1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myomesin-1 isoform X2
translation: MMSLPFYQKSHQHYDLSYRNKDLRTTMSHYQQEKKRSAIYTHGSTAYSSRSSAAHRQEAEASRQMSASSYQQQASQAYSLGATQHSSSEVSRKATAAYDYGYSHGLTDSSLLLEDYSSKLSPKTKRAKHSLLSGEEKENLASDYMVPIFSGRQVHVSGIADTEEERIKEAAAYIAQRNLLAREEGLVTSKQSRTSRQGKVSEQALAILQQEEAFEKKSRKVAIREKAEQLSLRKTLEETQTYHGKLNEDHLLHAPEFIIKPRSHTVWEKENVKIHCSVAGWPEPRVTWYKNQVPINVHANPGKYIIESRYGMHTLEIDTCDFEDTAQYRASAMNVKGELSAYASIVVKRYKGELDETRFHASTMPFSFAVTPFGYASKFDIHFDDKFDVSFGREGETMSLGCQVVITPEIKHFQPEVQWYRNGAPVSSSKWVQTHWSGDRATLTFSHLNKEDEGLYTIRVRMGEYYEQYSAYVFVRDADAEIEGAPAAPLDVVSLDANKDYIIISWKQPAVDGGSPILGYFIDKCEVGTDCWSQCNDTPVKFARFPVTGLIEGRSYLFRVRAVNKTGIGLPSRVSEPVAALDPSEKARLKSRPSAPWTGQIIVTEEEPTEGIVPGPPTDLSVTEATQSYVVLSWKPPGQRGHEGIMYFVEKCDAGTENWQRVNTELPVKSPRFALFDLAEGKAYRFRVRCSNSAGVGEPSEPTEVTIVGDKLDIPKAPGKIIPSRNTDTSVVVSWEESKDATELVGYYIESSVVGSGKWEPCNNNPVKGSRFTCHGLATGQNYIFRVRAVNAAGLSEYSQDSEAIEVKAAIGGGVSPDMCSQLTDVPGRLTDSRGGVHGASLPALQKDALLSSKPNKPSPSSPSSLGHPEVNKVSETVQEELTPSPPEAAPKGQSKSDSLKKKKDLVEVPSPPSDITCLESFRDSMVLGWKQPVKTGGAEITGYYVNYREVTDGVPGKWREANIKAVSDAAYKISDLKENVVYQFQVSAMNIAGLGAPSAVSKCFKCEEWTIAVPGPPHSLQYSEVRKNSLVLQWKPPVYTGRTPVTGYFVDLKETSGKDDQWRGLNKAAIQNKYLKVDGLKEGISYVFRVRAINQAGVGKPSDLAGPVVAETRPGTKEVVVNVDDDGIISLNFECDQMTPKSEFTWSKDYVSTEDSARLEVESKGNKTKLTFKDLGTDDLGIYSCDVTDTDGIASSYLIDEAEMKRLLALSQEHKFPTVPSKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQIQDGKATGHSTLVLIGDVYKKLQKEAEFQRQEWIRKQGPHFAEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGFYEVILKDDRGKDKSRLKLVDEAFKELMTEVCRKIALSATDLKIQSTAEGIRLYSFVTYYLDDLKVNWSHNGTDIKFTDRVKSGVTGEQIWLQISEPTPNDKGKYVMELFDGKTGHQRTVDLSGQAFDEAFAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCTVWGDPTPEVSWLKNEKPLVSDDHCNLRFESGKTAFFTISGVSTADSGKYGLVVKNKYGSETSDFTVSVFIPEEEARKAPAEPQKGNKKSK
SIO_010081: Myom1
subclass of: SO_0000673
so part of: Myom1
location: complement(join(3621143..3621436,3623375..3623430,3625610..3625632,3625885..3625921,3629339..3629502,3633960..3634065,3634159..3634197,3635519..3635606,3636484..3636597,3642023..3642090,3642355..3642414,3643630..3643774,3646661..3646797,3652544..3652588,3652707..3652813,3653702..3653858,3665879..3665993,3668385..3668569,3671234..3671360,3676757..3676953,3680354..3680641,3682072..3682193,3685301..3685475,3687348..3687531,3688451..3688575,3690714..3690770,3693502..3693701,3696740..3696881,3710995..3711156,3713488..3713652,3715817..3715873,3715990..3716078,3718045..3718137,3725289..3725446,3726018..3726267,3727392..3727532,3745768..3746081))
location: region:3621143-3746081:-1
so has part: feature:3745768-3746081:-1:exon
so has part: feature:3727392-3727532:-1:exon
so has part: feature:3726018-3726267:-1:exon
so has part: feature:3725289-3725446:-1:exon
so has part: feature:3718045-3718137:-1:exon
so has part: feature:3715990-3716078:-1:exon
so has part: feature:3715817-3715873:-1:exon
so has part: feature:3713488-3713652:-1:exon
so has part: feature:3710995-3711156:-1:exon
so has part: feature:3696740-3696881:-1:exon
so has part: feature:3693502-3693701:-1:exon
so has part: feature:3690714-3690770:-1:exon
so has part: feature:3688451-3688575:-1:exon
so has part: feature:3687348-3687531:-1:exon
so has part: feature:3685301-3685475:-1:exon
so has part: feature:3682072-3682193:-1:exon
so has part: feature:3680354-3680641:-1:exon
so has part: feature:3676757-3676953:-1:exon
so has part: feature:3671234-3671360:-1:exon
so has part: feature:3668385-3668569:-1:exon
so has part: feature:3665879-3665993:-1:exon
so has part: feature:3653702-3653858:-1:exon
so has part: feature:3652707-3652813:-1:exon
so has part: feature:3652544-3652588:-1:exon
so has part: feature:3646661-3646797:-1:exon
so has part: feature:3643630-3643774:-1:exon
so has part: feature:3642355-3642414:-1:exon
so has part: feature:3642023-3642090:-1:exon
so has part: feature:3636484-3636597:-1:exon
so has part: feature:3635519-3635606:-1:exon
so has part: feature:3634159-3634197:-1:exon
so has part: feature:3633960-3634065:-1:exon
so has part: feature:3629339-3629502:-1:exon
so has part: feature:3625885-3625921:-1:exon
so has part: feature:3625610-3625632:-1:exon
so has part: feature:3623375-3623430:-1:exon
so has part: feature:3621143-3621436:-1:exon

XP_048219602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3745768-3746081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3727392-3727532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3726018-3726267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3725289-3725446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3718045-3718137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3715990-3716078:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3715817-3715873:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3713488-3713652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3710995-3711156:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3696740-3696881:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3693502-3693701:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3690714-3690770:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3688451-3688575:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3687348-3687531:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3685301-3685475:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3682072-3682193:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3680354-3680641:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3676757-3676953:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3671234-3671360:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3668385-3668569:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3665879-3665993:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3653702-3653858:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3652707-3652813:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3652544-3652588:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3646661-3646797:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3643630-3643774:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3642355-3642414:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3642023-3642090:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3636484-3636597:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3635519-3635606:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3634159-3634197:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3633960-3634065:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3629339-3629502:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3625885-3625921:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3625610-3625632:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:3623375-3623430:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:3621143-3621436:-1:exon

LOC125364300
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364300
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3752826..3752951)
location: region:3752826-3752951:-1
so has part: feature:3752826-3752951:-1:exon
subclass of: SO_0000623

125364300
type: Gene
SIO_000068: ncbigene

position:3752826:-1
position: 3752826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3752951:-1
position: 3752951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3752826-3752951:-1:exon

LOC125364300
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snRNA
gene: LOC125364300
product: U6atac minor spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00619
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007213463.1
SIO_010081: LOC125364300
subclass of: SO_0000673
so part of: LOC125364300
location: complement(3752826..3752951)
location: region:3752826-3752951:-1
so has part: feature:3752826-3752951:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3752826-3752951:-1:exon

LOC125364186
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364186
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3780392..3790172
location: region:3780392-3790172:1
so has part: feature:3780392-3790172:1:exon
subclass of: SO_0000010

125364186
type: Gene
SIO_000068: ncbigene

position:3780392:1
position: 3780392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3790172:1
position: 3790172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3780392-3790172:1:exon

LOC125364186
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125364186
product: myosin regulatory light polypeptide 9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363647.1
SIO_010081: LOC125364186
subclass of: SO_0000673
so part of: LOC125364186
location: join(3780392..3780551,3786511..3786709,3787085..3787246,3789671..3790172)
location: region:3780392-3790172:1
so has part: feature:3780392-3780551:1:exon
so has part: feature:3786511-3786709:1:exon
so has part: feature:3787085-3787246:1:exon
so has part: feature:3789671-3790172:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3780392-3780551:1:exon

position:3780551:1
position: 3780551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3786511-3786709:1:exon

position:3786511:1
position: 3786511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3786709:1
position: 3786709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3787085-3787246:1:exon

position:3787085:1
position: 3787085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3787246:1
position: 3787246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3789671-3790172:1:exon

position:3789671:1
position: 3789671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125364186
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125364186
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light polypeptide 9
translation: MSSKRAKTKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
SIO_010081: LOC125364186
subclass of: SO_0000673
so part of: LOC125364186
location: join(3786526..3786709,3787085..3787246,3789671..3789843)
location: region:3786526-3789843:1
so has part: feature:3786526-3786709:1:exon
so has part: feature:3787085-3787246:1:exon
so has part: feature:3789671-3789843:1:exon

XP_048219604.1
type: Protein
SIO_000068: ncbiprotein

position:3786526:1
position: 3786526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3789843:1
position: 3789843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3786526-3786709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3787085-3787246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3789671-3789843:1:exon

LOC125364187
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3794733..3811515
location: region:3794733-3811515:1
so has part: feature:3794733-3811515:1:exon
subclass of: SO_0000010

125364187
type: Gene
SIO_000068: ncbigene

position:3794733:1
position: 3794733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3811515:1
position: 3811515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3794733-3811515:1:exon

LOC125364187
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125364187
product: myosin regulatory light chain 12B
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363648.1
SIO_010081: LOC125364187
subclass of: SO_0000673
so part of: LOC125364187
location: join(3794733..3794881,3806719..3806917,3809956..3810117,3811006..3811515)
location: region:3794733-3811515:1
so has part: feature:3794733-3794881:1:exon
so has part: feature:3806719-3806917:1:exon
so has part: feature:3809956-3810117:1:exon
so has part: feature:3811006-3811515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3794733-3794881:1:exon

position:3794881:1
position: 3794881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3806719-3806917:1:exon

position:3806719:1
position: 3806719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3806917:1
position: 3806917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3809956-3810117:1:exon

position:3809956:1
position: 3809956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3810117:1
position: 3810117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3811006-3811515:1:exon

position:3811006:1
position: 3811006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125364187
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125364187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light chain 12B
translation: MSSKKAKTKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
SIO_010081: LOC125364187
subclass of: SO_0000673
so part of: LOC125364187
location: join(3806734..3806917,3809956..3810117,3811006..3811178)
location: region:3806734-3811178:1
so has part: feature:3806734-3806917:1:exon
so has part: feature:3809956-3810117:1:exon
so has part: feature:3811006-3811178:1:exon

XP_048219605.1
type: Protein
SIO_000068: ncbiprotein

position:3806734:1
position: 3806734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3811178:1
position: 3811178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3806734-3806917:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3809956-3810117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3811006-3811178:1:exon

Tgif1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tgif1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3937058..3944663
location: region:3937058-3944663:1
so has part: feature:3937058-3944663:1:exon
subclass of: SO_0000010

125364052
type: Gene
SIO_000068: ncbigene

position:3937058:1
position: 3937058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3944663:1
position: 3944663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3937058-3944663:1:exon

Tgif1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tgif1
product: TGFB induced factor homeobox 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363466.1
SIO_010081: Tgif1
subclass of: SO_0000673
so part of: Tgif1
location: join(3937058..3937441,3942383..3942609,3943603..3944663)
location: region:3937058-3944663:1
so has part: feature:3937058-3937441:1:exon
so has part: feature:3942383-3942609:1:exon
so has part: feature:3943603-3944663:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3937058-3937441:1:exon

position:3937441:1
position: 3937441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3942383-3942609:1:exon

position:3942383:1
position: 3942383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3942609:1
position: 3942609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3943603-3944663:1:exon

position:3943603:1
position: 3943603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tgif1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tgif1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein TGIF1 isoform X1
translation: MKSKKGVVAASGSETEDEDSMDIPLDLSSSTGSGKRRRRGNLPRESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKVSEASSVEVAMGIKNFMPALEESPFHSCTAGPNPTVVGGPLSPKPTSPGPVLARPSVICHTTVTALKDGPLSLCQPVSVGHNTDLQQRAASSFTDTSLVYPEDACKSTHTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQARLAA
SIO_010081: Tgif1
subclass of: SO_0000673
so part of: Tgif1
location: join(3937426..3937441,3942383..3942609,3943603..3944172)
location: region:3937426-3944172:1
so has part: feature:3937426-3937441:1:exon
so has part: feature:3942383-3942609:1:exon
so has part: feature:3943603-3944172:1:exon

XP_048219423.1
type: Protein
SIO_000068: ncbiprotein

position:3937426:1
position: 3937426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3944172:1
position: 3944172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3937426-3937441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3942383-3942609:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3943603-3944172:1:exon

Tgif1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tgif1
product: TGFB induced factor homeobox 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363468.1
SIO_010081: Tgif1
subclass of: SO_0000673
so part of: Tgif1
location: join(3938906..3939179,3942383..3942609,3943603..3944663)
location: region:3938906-3944663:1
so has part: feature:3938906-3939179:1:exon
so has part: feature:3942383-3942609:1:exon
so has part: feature:3943603-3944663:1:exon

position:3938906:1
position: 3938906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3938906-3939179:1:exon

position:3939179:1
position: 3939179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3942383-3942609:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3943603-3944663:1:exon

Tgif1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tgif1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein TGIF1 isoform X3
translation: MKGVVAASGSETEDEDSMDIPLDLSSSTGSGKRRRRGNLPRESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKVSEASSVEVAMGIKNFMPALEESPFHSCTAGPNPTVVGGPLSPKPTSPGPVLARPSVICHTTVTALKDGPLSLCQPVSVGHNTDLQQRAASSFTDTSLVYPEDACKSTHTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQARLAA
SIO_010081: Tgif1
subclass of: SO_0000673
so part of: Tgif1
location: join(3939173..3939179,3942383..3942609,3943603..3944172)
location: region:3939173-3944172:1
so has part: feature:3939173-3939179:1:exon
so has part: feature:3942383-3942609:1:exon
so has part: feature:3943603-3944172:1:exon

XP_048219425.1
type: Protein
SIO_000068: ncbiprotein

position:3939173:1
position: 3939173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3939173-3939179:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3942383-3942609:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3943603-3944172:1:exon

Tgif1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tgif1
product: TGFB induced factor homeobox 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363467.1
SIO_010081: Tgif1
subclass of: SO_0000673
so part of: Tgif1
location: join(3940132..3940378,3942045..3942049,3942383..3942609,3943603..3944663)
location: region:3940132-3944663:1
so has part: feature:3940132-3940378:1:exon
so has part: feature:3942045-3942049:1:exon
so has part: feature:3942383-3942609:1:exon
so has part: feature:3943603-3944663:1:exon

position:3940132:1
position: 3940132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3940132-3940378:1:exon

position:3940378:1
position: 3940378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3942045-3942049:1:exon

position:3942045:1
position: 3942045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3942049:1
position: 3942049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3942383-3942609:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3943603-3944663:1:exon

Tgif1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tgif1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein TGIF1 isoform X2
translation: MDIPLDLSSSTGSGKRRRRGNLPRESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKVSEASSVEVAMGIKNFMPALEESPFHSCTAGPNPTVVGGPLSPKPTSPGPVLARPSVICHTTVTALKDGPLSLCQPVSVGHNTDLQQRAASSFTDTSLVYPEDACKSTHTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQARLAA
SIO_010081: Tgif1
subclass of: SO_0000673
so part of: Tgif1
location: join(3942427..3942609,3943603..3944172)
location: region:3942427-3944172:1
so has part: feature:3942427-3942609:1:exon
so has part: feature:3943603-3944172:1:exon

XP_048219424.1
type: Protein
SIO_000068: ncbiprotein

position:3942427:1
position: 3942427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3942427-3942609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3943603-3944172:1:exon

Dlgap1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Dlgap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3972971..4412241)
location: region:3972971-4412241:-1
so has part: feature:3972971-4412241:-1:exon
subclass of: SO_0000010

125363902
type: Gene
SIO_000068: ncbigene

position:3972971:-1
position: 3972971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4412241:-1
position: 4412241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3972971-4412241:-1:exon

Dlgap1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Dlgap1
product: DLG associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048363238.1
SIO_010081: Dlgap1
subclass of: SO_0000673
so part of: Dlgap1
location: complement(join(3972971..3973267,3976311..3976463,3983201..3983292,4003333..4003754,4020117..4020208,4023723..4024096,4130424..4130664,4135304..4135481,4208103..4208317,4287613..4288659,4412096..4412241))
location: region:3972971-4412241:-1
so has part: feature:4412096-4412241:-1:exon
so has part: feature:4287613-4288659:-1:exon
so has part: feature:4208103-4208317:-1:exon
so has part: feature:4135304-4135481:-1:exon
so has part: feature:4130424-4130664:-1:exon
so has part: feature:4023723-4024096:-1:exon
so has part: feature:4020117-4020208:-1:exon
so has part: feature:4003333-4003754:-1:exon
so has part: feature:3983201-3983292:-1:exon
so has part: feature:3976311-3976463:-1:exon
so has part: feature:3972971-3973267:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4412096-4412241:-1:exon

position:4412096:-1
position: 4412096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4287613-4288659:-1:exon

position:4287613:-1
position: 4287613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4288659:-1
position: 4288659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4208103-4208317:-1:exon

position:4208103:-1
position: 4208103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4208317:-1
position: 4208317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4135304-4135481:-1:exon

position:4135304:-1
position: 4135304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4135481:-1
position: 4135481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4130424-4130664:-1:exon

position:4130424:-1
position: 4130424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4130664:-1
position: 4130664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4023723-4024096:-1:exon

position:4023723:-1
position: 4023723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4024096:-1
position: 4024096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4020117-4020208:-1:exon

position:4020117:-1
position: 4020117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4020208:-1
position: 4020208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4003333-4003754:-1:exon

position:4003333:-1
position: 4003333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4003754:-1
position: 4003754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3983201-3983292:-1:exon

position:3983201:-1
position: 3983201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3983292:-1
position: 3983292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3976311-3976463:-1:exon

position:3976311:-1
position: 3976311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3976463:-1
position: 3976463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3972971-3973267:-1:exon

position:3973267:-1
position: 3973267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dlgap1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Dlgap1
product: DLG associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048363239.1
SIO_010081: Dlgap1
subclass of: SO_0000673
so part of: Dlgap1
location: complement(join(3972971..3973267,3976311..3976463,3983201..3983292,4003333..4003754,4020117..4020208,4023723..4024096,4130424..4130664,4135304..4135481,4208103..4208317,4281832..4281986))
location: region:3972971-4281986:-1
so has part: feature:4281832-4281986:-1:exon
so has part: feature:4208103-4208317:-1:exon
so has part: feature:4135304-4135481:-1:exon
so has part: feature:4130424-4130664:-1:exon
so has part: feature:4023723-4024096:-1:exon
so has part: feature:4020117-4020208:-1:exon
so has part: feature:4003333-4003754:-1:exon
so has part: feature:3983201-3983292:-1:exon
so has part: feature:3976311-3976463:-1:exon
so has part: feature:3972971-3973267:-1:exon

position:4281986:-1
position: 4281986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4281832-4281986:-1:exon

position:4281832:-1
position: 4281832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4208103-4208317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4135304-4135481:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4130424-4130664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4023723-4024096:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4020117-4020208:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4003333-4003754:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3983201-3983292:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3976311-3976463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3972971-3973267:-1:exon

Dlgap1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Dlgap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 1 isoform X1
translation: MTKTPRAVFAQSGSGTCHGGAHAPRGCSPAAMKGLSGSRSHHHGITCESACDSLSHHSERKPYLLSPVEHHPADHPYYTQRNSFQAECVGPFSDPLASSTFPRRHYASQQELKDECALVPRTLATKANRIPANLLDQFERQLPLNRDGYHTLQYKRTALEHRSDSPGRIRHLVHSVQKLFTKSHSLEGPSKGSVNGGKASPDETQAGRYGKRSKSKERRSEPKARSNASNTSPTSPGWWSSDDNLDSDVCIYHAPSGVMTMGRCPDRSASQYFMEAYNTISEQAVKASRSNNDVKCSTCANLPVNLDAPLLKKSAWSSTLTVSRAREVYQKASVNMDQAMVKSESCQQERSCQYLQVPQDEWSGYTPRGKDDEIPCRRMRSGSYIKAMGDEDSGDSDTSPKPSPKVAARRESYLKATQPSLTELTTLKISNEHSPKLQIRSHSYLRAVSEVSINRSLDSLDPAGLLTSPKFRSRNESYMRAMSTISQVSEMEVNGQFESVCESVFSELESQAVEALDLPVPGCFRMRSHSYVRAIEKGCSQDDECVSLRSSSPPRTTTTVRTIQSSTVSSCITTYKKTPPPVPPRTTTKPFISITAQSSTESAQDAYMDGQGQRGDIISQSGLSNSTESLDSMKALTAAIEAANAQIHGPASQHMGNNTATVTTTTTTIATVTTEDRKKDFKKNRCLSIGIQVDDAEEPEKTGENKAPSKFQSVGVQVEEEKCFRRFTRSNSVTTAVQADLDFHDHLENSLESIEDNSCPGPMARQFSRDASTSTVSIQGSGNHYHACAADDDFDTDFDPSILPPPDPWIDSITEDPLEAVQRSVCHRDGHWFLKLLQAERDRMEGWCQQMEREERENNLPEDILGKIRTAVGSAQLLMAQKFYQFRELCEENLNPNAHPRPTSQDLAGFWDMLQLSIENISMKFDELHQLKANNWKQMDPLDKKERRAPPPVPKKPAKGPAPLIRERSLESSQRQEARKRLMAAKRAASVRQNSATESAESIEIYIPEAQTRL
SIO_010081: Dlgap1
subclass of: SO_0000673
so part of: Dlgap1
location: complement(join(3973058..3973267,3976311..3976463,3983201..3983292,4003333..4003754,4020117..4020208,4023723..4024096,4130424..4130664,4135304..4135481,4208103..4208317,4287613..4288659,4412096..4412116))
location: region:3973058-4412116:-1
so has part: feature:4412096-4412116:-1:exon
so has part: feature:4287613-4288659:-1:exon
so has part: feature:4208103-4208317:-1:exon
so has part: feature:4135304-4135481:-1:exon
so has part: feature:4130424-4130664:-1:exon
so has part: feature:4023723-4024096:-1:exon
so has part: feature:4020117-4020208:-1:exon
so has part: feature:4003333-4003754:-1:exon
so has part: feature:3983201-3983292:-1:exon
so has part: feature:3976311-3976463:-1:exon
so has part: feature:3973058-3973267:-1:exon

XP_048219195.1
type: Protein
SIO_000068: ncbiprotein

position:3973058:-1
position: 3973058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4412116:-1
position: 4412116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4412096-4412116:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4287613-4288659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4208103-4208317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4135304-4135481:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4130424-4130664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4023723-4024096:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4020117-4020208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4003333-4003754:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3983201-3983292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3976311-3976463:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3973058-3973267:-1:exon

Dlgap1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Dlgap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 1 isoform X2
translation: MIDLFKAEWVSSVCVQVSRNGRTDQVPQDEWSGYTPRGKDDEIPCRRMRSGSYIKAMGDEDSGDSDTSPKPSPKVAARRESYLKATQPSLTELTTLKISNEHSPKLQIRSHSYLRAVSEVSINRSLDSLDPAGLLTSPKFRSRNESYMRAMSTISQVSEMEVNGQFESVCESVFSELESQAVEALDLPVPGCFRMRSHSYVRAIEKGCSQDDECVSLRSSSPPRTTTTVRTIQSSTVSSCITTYKKTPPPVPPRTTTKPFISITAQSSTESAQDAYMDGQGQRGDIISQSGLSNSTESLDSMKALTAAIEAANAQIHGPASQHMGNNTATVTTTTTTIATVTTEDRKKDFKKNRCLSIGIQVDDAEEPEKTGENKAPSKFQSVGVQVEEEKCFRRFTRSNSVTTAVQADLDFHDHLENSLESIEDNSCPGPMARQFSRDASTSTVSIQGSGNHYHACAADDDFDTDFDPSILPPPDPWIDSITEDPLEAVQRSVCHRDGHWFLKLLQAERDRMEGWCQQMEREERENNLPEDILGKIRTAVGSAQLLMAQKFYQFRELCEENLNPNAHPRPTSQDLAGFWDMLQLSIENISMKFDELHQLKANNWKQMDPLDKKERRAPPPVPKKPAKGPAPLIRERSLESSQRQEARKRLMAAKRAASVRQNSATESAESIEIYIPEAQTRL
SIO_010081: Dlgap1
subclass of: SO_0000673
so part of: Dlgap1
location: complement(join(3973058..3973267,3976311..3976463,3983201..3983292,4003333..4003754,4020117..4020208,4023723..4024096,4130424..4130664,4135304..4135481,4208103..4208317,4281832..4281906))
location: region:3973058-4281906:-1
so has part: feature:4281832-4281906:-1:exon
so has part: feature:4208103-4208317:-1:exon
so has part: feature:4135304-4135481:-1:exon
so has part: feature:4130424-4130664:-1:exon
so has part: feature:4023723-4024096:-1:exon
so has part: feature:4020117-4020208:-1:exon
so has part: feature:4003333-4003754:-1:exon
so has part: feature:3983201-3983292:-1:exon
so has part: feature:3976311-3976463:-1:exon
so has part: feature:3973058-3973267:-1:exon

XP_048219196.1
type: Protein
SIO_000068: ncbiprotein

position:4281906:-1
position: 4281906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4281832-4281906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4208103-4208317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4135304-4135481:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4130424-4130664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4023723-4024096:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4020117-4020208:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4003333-4003754:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3983201-3983292:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3976311-3976463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3973058-3973267:-1:exon

LOC125364162
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4949401..4974401
location: region:4949401-4974401:1
so has part: feature:4949401-4974401:1:exon
subclass of: SO_0000011

125364162
type: Gene
SIO_000068: ncbigene

position:4949401:1
position: 4949401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4974401:1
position: 4974401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4949401-4974401:1:exon

LOC125364162
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125364162
product: uncharacterized LOC125364162
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007213429.1
SIO_010081: LOC125364162
subclass of: SO_0000673
so part of: LOC125364162
location: join(4949401..4949410,4959929..4959932,4968803..4968807,4973354..4973358,4974131..4974401)
location: region:4949401-4974401:1
so has part: feature:4949401-4949410:1:exon
so has part: feature:4959929-4959932:1:exon
so has part: feature:4968803-4968807:1:exon
so has part: feature:4973354-4973358:1:exon
so has part: feature:4974131-4974401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4949401-4949410:1:exon

position:4949410:1
position: 4949410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4959929-4959932:1:exon

position:4959929:1
position: 4959929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4959932:1
position: 4959932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4968803-4968807:1:exon

position:4968803:1
position: 4968803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4968807:1
position: 4968807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4973354-4973358:1:exon

position:4973354:1
position: 4973354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4973358:1
position: 4973358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4974131-4974401:1:exon

position:4974131:1
position: 4974131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125364163
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364163
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5031744..5035424)
location: region:5031744-5035424:-1
so has part: feature:5031744-5035424:-1:exon
subclass of: SO_0000010

125364163
type: Gene
SIO_000068: ncbigene

position:5031744:-1
position: 5031744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5035424:-1
position: 5035424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5031744-5035424:-1:exon

LOC125364163
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125364163
product: chromosome-associated kinesin KIF4A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048363612.1
SIO_010081: LOC125364163
subclass of: SO_0000673
so part of: LOC125364163
location: complement(5031744..5035424)
location: region:5031744-5035424:-1
so has part: feature:5031744-5035424:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5031744-5035424:-1:exon

LOC125364163
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125364163
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromosome-associated kinesin KIF4A-like
translation: MKEEVKGIPVRVALRCRPLVPKERSEGCQMCLSFVPGEPQVVVGTDKCFTYDFVFDPSTEQEEVFNTAVAPLIKGIFKGYNATVLAYGQTGSGKTYSMGGTYTAEQENEPTVGVIPRVIQLLFKEIGDRRDFEFTLKVSYLEIYNEEILDLLCSPREKASQINIREDPKEGIKIVGLTEKPVSIASNTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTISIEQRKKNDQNCSFRSKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISALGDDKRGRFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRARKIKNKPVINLDPQTAELNHLKQQVQQLQVLLLQAHGGTLPGSISVEPCENLQSLMEKNQSLMEENKKLSQGLSDAAGQTAQMLERIIVTEQANEKMSAKLKELRQHAACKLDLHKLVETSQDQELKGNLALICNLQQAIAQLSDDTVACIEAATDGALEPETQVETSADTSRSSDIFTTQHALRQAQISKELLELNKALVLKEDLARKMTQNESQLQPIQLQYQDNIKHLELEIISLQKEKEELVLELHSAKKDVNQTKLSEHRRKCLQELEGQIADLKKKLNEQSKLLKLKESTERTVSKLNQEIQMMKSHRVQLMRQMKDDAEKFRQWKHQKDKEVIQLKERDRKRQYELLKLERNFQKQSTVLRRKTEEAAAANKRLKDALQKQGEVARKRKETQSCGMESTATRVKNWLGSEIEVMVSTEEAKRHLNDLLEDRKILAQDVAQLRAKKECGENLPPKLRRYTFSRVSAHDRVPETEVSITQQIEGLETEMELRSAQIADLQQKLLDAESEDRPKQRWENITTILEAKHALKYLIGELVSSKIQISKLESSMKQSIASCADMQKMLSEERNHFAEAETELKADLVRAEQHHQEKVLYLLMQLQQSQTAEIQPEASREVSGREQQLLTTLKCQDNELRKMQEVCEQNQQLLQEKEVIKKKLTLLQVASRHKSVHVPNSSFEYIPPKPKPFQVKEKFLEQSLDMEELTDYSENSIDVHENGGSDGDNEEWKPTKLAKITQKPIHGCACKCWCGNRKCGCRRQRSDCSVACGCDFTKCRNRQQSQCSFSGVGQGSDPEDSLKLEDPTEVTPGLSFFNPVCATPNSKILQEVRDGDKALFNKTALALSFGFSELQPRTIKSQQSKAPGKKKKRTLGSSTSFFSGCSSMEEEAY
SIO_010081: LOC125364163
subclass of: SO_0000673
so part of: LOC125364163
location: complement(5031744..5035424)
location: region:5031744-5035424:-1
so has part: feature:5031744-5035424:-1:exon

XP_048219569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5031744-5035424:-1:exon

LOC125364137
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5245196..5264194)
location: region:5245196-5264194:-1
so has part: feature:5245196-5264194:-1:exon
subclass of: SO_0000011

125364137
type: Gene
SIO_000068: ncbigene

position:5245196:-1
position: 5245196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5264194:-1
position: 5264194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5245196-5264194:-1:exon

LOC125364137
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125364137
product: uncharacterized LOC125364137
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007213419.1
SIO_010081: LOC125364137
subclass of: SO_0000673
so part of: LOC125364137
location: complement(join(5245196..5245236,5255568..5255574,5264064..5264194))
location: region:5245196-5264194:-1
so has part: feature:5264064-5264194:-1:exon
so has part: feature:5255568-5255574:-1:exon
so has part: feature:5245196-5245236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5264064-5264194:-1:exon

position:5264064:-1
position: 5264064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5255568-5255574:-1:exon

position:5255568:-1
position: 5255568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5255574:-1
position: 5255574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5245196-5245236:-1:exon

position:5245236:-1
position: 5245236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125364136
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5276302..5277066
location: region:5276302-5277066:1
so has part: feature:5276302-5277066:1:exon

125364136
type: Gene
SIO_000068: ncbigene

position:5276302:1
position: 5276302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5277066:1
position: 5277066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5276302-5277066:1:exon

LOC125364136
type: Exon
subclass of: SO_0000147
RO_0002162: 214514
gene: LOC125364136
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125364136
subclass of: SO_0000673
so part of: LOC125364136
location: 5276302..5277066
location: region:5276302-5277066:1
so has part: feature:5276302-5277066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5276302-5277066:1:exon

Akain1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Akain1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5293063..5294180)
location: region:5293063-5294180:-1
so has part: feature:5293063-5294180:-1:exon
subclass of: SO_0000010

125364248
type: Gene
SIO_000068: ncbigene

position:5293063:-1
position: 5293063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5294180:-1
position: 5294180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5293063-5294180:-1:exon

Akain1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Akain1
product: A-kinase anchor inhibitor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_048363734.1
SIO_010081: Akain1
subclass of: SO_0000673
so part of: Akain1
location: complement(join(5293063..5293256,5294000..5294180))
location: region:5293063-5294180:-1
so has part: feature:5294000-5294180:-1:exon
so has part: feature:5293063-5293256:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5294000-5294180:-1:exon

position:5294000:-1
position: 5294000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5293063-5293256:-1:exon

position:5293256:-1
position: 5293256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Akain1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Akain1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein inhibitor 1
translation: MATQPKSVPFQRLPQRSSVVRSWTTPGSRGFWDVENVNLVTLRNKRNGDFVGDEEGQLAEGEKPGNDPEEAKLQSASKQIVQNAILQAMQQVSQESGRREGRPSDGRPRCPLGGRELPKKHGKK
SIO_010081: Akain1
subclass of: SO_0000673
so part of: Akain1
location: complement(join(5293063..5293256,5294000..5294180))
location: region:5293063-5294180:-1
so has part: feature:5294000-5294180:-1:exon
so has part: feature:5293063-5293256:-1:exon

XP_048219691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5294000-5294180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5293063-5293256:-1:exon

LOC125364249
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5369163..5369543
location: region:5369163-5369543:1
so has part: feature:5369163-5369543:1:exon
subclass of: SO_0000010

125364249
type: Gene
SIO_000068: ncbigene

position:5369163:1
position: 5369163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5369543:1
position: 5369543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5369163-5369543:1:exon

LOC125364249
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: LOC125364249
product: protein LDOC1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_048363736.1
SIO_010081: LOC125364249
subclass of: SO_0000673
so part of: LOC125364249
location: 5369163..5369543
location: region:5369163-5369543:1
so has part: feature:5369163-5369543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5369163-5369543:1:exon

LOC125364249
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: LOC125364249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LDOC1-like
translation: MMQDLLTQNHALRRENNELMDQVRRLLCEKANLLAQVRPPPCPVAFPEAFRGDPARLPEFLSQAHAYMSFFEARFSSDTLKVAFLISRFSGPAEQWVVPIIERDSPTLSQYEAFVDALKQAFGRNP
SIO_010081: LOC125364249
subclass of: SO_0000673
so part of: LOC125364249
location: 5369163..5369543
location: region:5369163-5369543:1
so has part: feature:5369163-5369543:1:exon

XP_048219693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5369163-5369543:1:exon

Zbtb14
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Zbtb14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5401232..5408656)
location: region:5401232-5408656:-1
so has part: feature:5401232-5408656:-1:exon
subclass of: SO_0000010

125364024
type: Gene
SIO_000068: ncbigene

position:5401232:-1
position: 5401232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5408656:-1
position: 5408656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5401232-5408656:-1:exon

Zbtb14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Zbtb14
product: zinc finger and BTB domain containing 14, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363424.1
SIO_010081: Zbtb14
subclass of: SO_0000673
so part of: Zbtb14
location: complement(join(5401232..5404347,5405721..5405804,5408470..5408656))
location: region:5401232-5408656:-1
so has part: feature:5408470-5408656:-1:exon
so has part: feature:5405721-5405804:-1:exon
so has part: feature:5401232-5404347:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5408470-5408656:-1:exon

position:5408470:-1
position: 5408470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5405721-5405804:-1:exon

position:5405721:-1
position: 5405721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5405804:-1
position: 5405804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5401232-5404347:-1:exon

position:5404347:-1
position: 5404347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Zbtb14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Zbtb14
product: zinc finger and BTB domain containing 14, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363427.1
SIO_010081: Zbtb14
subclass of: SO_0000673
so part of: Zbtb14
location: complement(join(5401232..5404347,5405721..5405804,5407994..5408012))
location: region:5401232-5408012:-1
so has part: feature:5407994-5408012:-1:exon
so has part: feature:5405721-5405804:-1:exon
so has part: feature:5401232-5404347:-1:exon

position:5408012:-1
position: 5408012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5407994-5408012:-1:exon

position:5407994:-1
position: 5407994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5405721-5405804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5401232-5404347:-1:exon

Zbtb14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Zbtb14
product: zinc finger and BTB domain containing 14, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363426.1
SIO_010081: Zbtb14
subclass of: SO_0000673
so part of: Zbtb14
location: complement(join(5401232..5404347,5405721..5405804,5407477..5407844))
location: region:5401232-5407844:-1
so has part: feature:5407477-5407844:-1:exon
so has part: feature:5405721-5405804:-1:exon
so has part: feature:5401232-5404347:-1:exon

position:5407844:-1
position: 5407844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5407477-5407844:-1:exon

position:5407477:-1
position: 5407477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5405721-5405804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5401232-5404347:-1:exon

Zbtb14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Zbtb14
product: zinc finger and BTB domain containing 14, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363425.1
SIO_010081: Zbtb14
subclass of: SO_0000673
so part of: Zbtb14
location: complement(join(5401232..5404347,5405721..5405804,5407434..5407452))
location: region:5401232-5407452:-1
so has part: feature:5407434-5407452:-1:exon
so has part: feature:5405721-5405804:-1:exon
so has part: feature:5401232-5404347:-1:exon

position:5407452:-1
position: 5407452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5407434-5407452:-1:exon

position:5407434:-1
position: 5407434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5405721-5405804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5401232-5404347:-1:exon

Zbtb14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Zbtb14
product: zinc finger and BTB domain containing 14, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363428.1
SIO_010081: Zbtb14
subclass of: SO_0000673
so part of: Zbtb14
location: complement(join(5401232..5404347,5405721..5405804,5406850..5406868))
location: region:5401232-5406868:-1
so has part: feature:5406850-5406868:-1:exon
so has part: feature:5405721-5405804:-1:exon
so has part: feature:5401232-5404347:-1:exon

position:5406868:-1
position: 5406868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5406850-5406868:-1:exon

position:5406850:-1
position: 5406850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5405721-5405804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5401232-5404347:-1:exon

Zbtb14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Zbtb14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 14
translation: MEFFISMSETIKYNDDDHKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTYFKKLFKKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFLDKLCSQKRDVSSPDENNGQSKSKYCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVEGTPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALTFNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHTADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERPFACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTPSALQSETEQLQAAAMAAEAEQQLETIACS
SIO_010081: Zbtb14
subclass of: SO_0000673
so part of: Zbtb14
location: complement(join(5403001..5404347,5405721..5405723))
location: region:5403001-5405723:-1
so has part: feature:5405721-5405723:-1:exon
so has part: feature:5403001-5404347:-1:exon

XP_048219381.1
type: Protein
SIO_000068: ncbiprotein

position:5403001:-1
position: 5403001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5405723:-1
position: 5405723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5405721-5405723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5403001-5404347:-1:exon

Zbtb14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Zbtb14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 14
translation: MEFFISMSETIKYNDDDHKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTYFKKLFKKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFLDKLCSQKRDVSSPDENNGQSKSKYCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVEGTPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALTFNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHTADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERPFACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTPSALQSETEQLQAAAMAAEAEQQLETIACS
SIO_010081: Zbtb14
subclass of: SO_0000673
so part of: Zbtb14
location: complement(join(5403001..5404347,5405721..5405723))
location: region:5403001-5405723:-1
so has part: feature:5405721-5405723:-1:exon
so has part: feature:5403001-5404347:-1:exon

XP_048219382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5405721-5405723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5403001-5404347:-1:exon

Zbtb14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Zbtb14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 14
translation: MEFFISMSETIKYNDDDHKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTYFKKLFKKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFLDKLCSQKRDVSSPDENNGQSKSKYCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVEGTPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALTFNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHTADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERPFACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTPSALQSETEQLQAAAMAAEAEQQLETIACS
SIO_010081: Zbtb14
subclass of: SO_0000673
so part of: Zbtb14
location: complement(join(5403001..5404347,5405721..5405723))
location: region:5403001-5405723:-1
so has part: feature:5405721-5405723:-1:exon
so has part: feature:5403001-5404347:-1:exon

XP_048219383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5405721-5405723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5403001-5404347:-1:exon

Zbtb14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Zbtb14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 14
translation: MEFFISMSETIKYNDDDHKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTYFKKLFKKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFLDKLCSQKRDVSSPDENNGQSKSKYCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVEGTPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALTFNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHTADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERPFACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTPSALQSETEQLQAAAMAAEAEQQLETIACS
SIO_010081: Zbtb14
subclass of: SO_0000673
so part of: Zbtb14
location: complement(join(5403001..5404347,5405721..5405723))
location: region:5403001-5405723:-1
so has part: feature:5405721-5405723:-1:exon
so has part: feature:5403001-5404347:-1:exon

XP_048219384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5405721-5405723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5403001-5404347:-1:exon

Zbtb14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Zbtb14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 14
translation: MEFFISMSETIKYNDDDHKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTYFKKLFKKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFLDKLCSQKRDVSSPDENNGQSKSKYCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVEGTPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALTFNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHTADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERPFACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTPSALQSETEQLQAAAMAAEAEQQLETIACS
SIO_010081: Zbtb14
subclass of: SO_0000673
so part of: Zbtb14
location: complement(join(5403001..5404347,5405721..5405723))
location: region:5403001-5405723:-1
so has part: feature:5405721-5405723:-1:exon
so has part: feature:5403001-5404347:-1:exon

XP_048219385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5405721-5405723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5403001-5404347:-1:exon

Epb41l3
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Epb41l3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5488203..5703285)
location: region:5488203-5703285:-1
so has part: feature:5488203-5703285:-1:exon
subclass of: SO_0000010

125364072
type: Gene
SIO_000068: ncbigene

position:5488203:-1
position: 5488203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5703285:-1
position: 5703285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5488203-5703285:-1:exon

Epb41l3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Epb41l3
product: erythrocyte membrane protein band 4.1 like 3, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363501.1
SIO_010081: Epb41l3
subclass of: SO_0000673
so part of: Epb41l3
location: complement(join(5488203..5489336,5490759..5490875,5491126..5491206,5491642..5491740,5492482..5492613,5493747..5494118,5494682..5494804,5497381..5497455,5500421..5500612,5501341..5501376,5504737..5504790,5509968..5510528,5514014..5514234,5516448..5516623,5518389..5518486,5521309..5521461,5527114..5527201,5527876..5528094,5531611..5531686,5537099..5537141,5538645..5538749,5569054..5569251,5574775..5574980,5702704..5703285))
location: region:5488203-5703285:-1
so has part: feature:5702704-5703285:-1:exon
so has part: feature:5574775-5574980:-1:exon
so has part: feature:5569054-5569251:-1:exon
so has part: feature:5538645-5538749:-1:exon
so has part: feature:5537099-5537141:-1:exon
so has part: feature:5531611-5531686:-1:exon
so has part: feature:5527876-5528094:-1:exon
so has part: feature:5527114-5527201:-1:exon
so has part: feature:5521309-5521461:-1:exon
so has part: feature:5518389-5518486:-1:exon
so has part: feature:5516448-5516623:-1:exon
so has part: feature:5514014-5514234:-1:exon
so has part: feature:5509968-5510528:-1:exon
so has part: feature:5504737-5504790:-1:exon
so has part: feature:5501341-5501376:-1:exon
so has part: feature:5500421-5500612:-1:exon
so has part: feature:5497381-5497455:-1:exon
so has part: feature:5494682-5494804:-1:exon
so has part: feature:5493747-5494118:-1:exon
so has part: feature:5492482-5492613:-1:exon
so has part: feature:5491642-5491740:-1:exon
so has part: feature:5491126-5491206:-1:exon
so has part: feature:5490759-5490875:-1:exon
so has part: feature:5488203-5489336:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5702704-5703285:-1:exon

position:5702704:-1
position: 5702704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5574775-5574980:-1:exon

position:5574775:-1
position: 5574775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5574980:-1
position: 5574980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5569054-5569251:-1:exon

position:5569054:-1
position: 5569054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5569251:-1
position: 5569251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5538645-5538749:-1:exon

position:5538645:-1
position: 5538645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5538749:-1
position: 5538749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5537099-5537141:-1:exon

position:5537099:-1
position: 5537099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5537141:-1
position: 5537141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5531611-5531686:-1:exon

position:5531611:-1
position: 5531611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5531686:-1
position: 5531686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5527876-5528094:-1:exon

position:5527876:-1
position: 5527876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5528094:-1
position: 5528094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5527114-5527201:-1:exon

position:5527114:-1
position: 5527114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5527201:-1
position: 5527201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5521309-5521461:-1:exon

position:5521309:-1
position: 5521309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5521461:-1
position: 5521461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5518389-5518486:-1:exon

position:5518389:-1
position: 5518389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5518486:-1
position: 5518486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5516448-5516623:-1:exon

position:5516448:-1
position: 5516448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5516623:-1
position: 5516623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5514014-5514234:-1:exon

position:5514014:-1
position: 5514014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5514234:-1
position: 5514234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5509968-5510528:-1:exon

position:5509968:-1
position: 5509968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5510528:-1
position: 5510528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5504737-5504790:-1:exon

position:5504737:-1
position: 5504737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5504790:-1
position: 5504790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5501341-5501376:-1:exon

position:5501341:-1
position: 5501341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5501376:-1
position: 5501376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5500421-5500612:-1:exon

position:5500421:-1
position: 5500421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5500612:-1
position: 5500612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5497381-5497455:-1:exon

position:5497381:-1
position: 5497381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5497455:-1
position: 5497455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5494682-5494804:-1:exon

position:5494682:-1
position: 5494682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5494804:-1
position: 5494804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5493747-5494118:-1:exon

position:5493747:-1
position: 5493747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5494118:-1
position: 5494118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5492482-5492613:-1:exon

position:5492482:-1
position: 5492482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5492613:-1
position: 5492613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5491642-5491740:-1:exon

position:5491642:-1
position: 5491642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5491740:-1
position: 5491740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5491126-5491206:-1:exon

position:5491126:-1
position: 5491126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5491206:-1
position: 5491206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5490759-5490875:-1:exon

position:5490759:-1
position: 5490759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5490875:-1
position: 5490875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5488203-5489336:-1:exon

position:5489336:-1
position: 5489336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Epb41l3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Epb41l3
product: erythrocyte membrane protein band 4.1 like 3, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363497.1
SIO_010081: Epb41l3
subclass of: SO_0000673
so part of: Epb41l3
location: complement(join(5488203..5489336,5490759..5490875,5491126..5491206,5491642..5491740,5492482..5492613,5493747..5494118,5497381..5497455,5500421..5500612,5504737..5504790,5514014..5514180,5516448..5516623,5518389..5518486,5521309..5521461,5527114..5527201,5527876..5528094,5531611..5531686,5537099..5537141,5538645..5538749,5569054..5569251,5574775..5574980,5633473..5633659))
location: region:5488203-5633659:-1
so has part: feature:5633473-5633659:-1:exon
so has part: feature:5574775-5574980:-1:exon
so has part: feature:5569054-5569251:-1:exon
so has part: feature:5538645-5538749:-1:exon
so has part: feature:5537099-5537141:-1:exon
so has part: feature:5531611-5531686:-1:exon
so has part: feature:5527876-5528094:-1:exon
so has part: feature:5527114-5527201:-1:exon
so has part: feature:5521309-5521461:-1:exon
so has part: feature:5518389-5518486:-1:exon
so has part: feature:5516448-5516623:-1:exon
so has part: feature:5514014-5514180:-1:exon
so has part: feature:5504737-5504790:-1:exon
so has part: feature:5500421-5500612:-1:exon
so has part: feature:5497381-5497455:-1:exon
so has part: feature:5493747-5494118:-1:exon
so has part: feature:5492482-5492613:-1:exon
so has part: feature:5491642-5491740:-1:exon
so has part: feature:5491126-5491206:-1:exon
so has part: feature:5490759-5490875:-1:exon
so has part: feature:5488203-5489336:-1:exon

position:5633659:-1
position: 5633659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5633473-5633659:-1:exon

position:5633473:-1
position: 5633473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5574775-5574980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5569054-5569251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5538645-5538749:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5537099-5537141:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5531611-5531686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5527876-5528094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5527114-5527201:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5521309-5521461:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5518389-5518486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5516448-5516623:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5514014-5514180:-1:exon

position:5514180:-1
position: 5514180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5504737-5504790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5500421-5500612:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5497381-5497455:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5493747-5494118:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5492482-5492613:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5491642-5491740:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5491126-5491206:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5490759-5490875:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5488203-5489336:-1:exon

Epb41l3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Epb41l3
product: erythrocyte membrane protein band 4.1 like 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363495.1
SIO_010081: Epb41l3
subclass of: SO_0000673
so part of: Epb41l3
location: complement(join(5488203..5489336,5490759..5490875,5491126..5491206,5491642..5491740,5492482..5492613,5493747..5494118,5497381..5497455,5500421..5500612,5504737..5504790,5514014..5514234,5516448..5516623,5518389..5518486,5521309..5521461,5527114..5527201,5527876..5528094,5531611..5531686,5537099..5537141,5538645..5538749,5569054..5569251,5574775..5574980,5633473..5633638))
location: region:5488203-5633638:-1
so has part: feature:5633473-5633638:-1:exon
so has part: feature:5574775-5574980:-1:exon
so has part: feature:5569054-5569251:-1:exon
so has part: feature:5538645-5538749:-1:exon
so has part: feature:5537099-5537141:-1:exon
so has part: feature:5531611-5531686:-1:exon
so has part: feature:5527876-5528094:-1:exon
so has part: feature:5527114-5527201:-1:exon
so has part: feature:5521309-5521461:-1:exon
so has part: feature:5518389-5518486:-1:exon
so has part: feature:5516448-5516623:-1:exon
so has part: feature:5514014-5514234:-1:exon
so has part: feature:5504737-5504790:-1:exon
so has part: feature:5500421-5500612:-1:exon
so has part: feature:5497381-5497455:-1:exon
so has part: feature:5493747-5494118:-1:exon
so has part: feature:5492482-5492613:-1:exon
so has part: feature:5491642-5491740:-1:exon
so has part: feature:5491126-5491206:-1:exon
so has part: feature:5490759-5490875:-1:exon
so has part: feature:5488203-5489336:-1:exon

position:5633638:-1
position: 5633638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5633473-5633638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5574775-5574980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5569054-5569251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5538645-5538749:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5537099-5537141:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5531611-5531686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5527876-5528094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5527114-5527201:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5521309-5521461:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5518389-5518486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5516448-5516623:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5514014-5514234:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5504737-5504790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5500421-5500612:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5497381-5497455:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5493747-5494118:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5492482-5492613:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5491642-5491740:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5491126-5491206:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5490759-5490875:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5488203-5489336:-1:exon

Epb41l3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Epb41l3
product: erythrocyte membrane protein band 4.1 like 3, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363500.1
SIO_010081: Epb41l3
subclass of: SO_0000673
so part of: Epb41l3
location: complement(join(5488203..5489336,5490759..5490875,5491126..5491206,5491642..5491740,5492482..5492613,5493747..5494118,5500421..5500612,5504737..5504790,5514014..5514180,5516448..5516623,5518389..5518486,5521309..5521461,5527114..5527201,5527876..5528094,5531611..5531686,5537099..5537141,5538645..5538749,5569054..5569251,5574775..5574980,5633473..5633632))
location: region:5488203-5633632:-1
so has part: feature:5633473-5633632:-1:exon
so has part: feature:5574775-5574980:-1:exon
so has part: feature:5569054-5569251:-1:exon
so has part: feature:5538645-5538749:-1:exon
so has part: feature:5537099-5537141:-1:exon
so has part: feature:5531611-5531686:-1:exon
so has part: feature:5527876-5528094:-1:exon
so has part: feature:5527114-5527201:-1:exon
so has part: feature:5521309-5521461:-1:exon
so has part: feature:5518389-5518486:-1:exon
so has part: feature:5516448-5516623:-1:exon
so has part: feature:5514014-5514180:-1:exon
so has part: feature:5504737-5504790:-1:exon
so has part: feature:5500421-5500612:-1:exon
so has part: feature:5493747-5494118:-1:exon
so has part: feature:5492482-5492613:-1:exon
so has part: feature:5491642-5491740:-1:exon
so has part: feature:5491126-5491206:-1:exon
so has part: feature:5490759-5490875:-1:exon
so has part: feature:5488203-5489336:-1:exon

position:5633632:-1
position: 5633632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5633473-5633632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5574775-5574980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5569054-5569251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5538645-5538749:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5537099-5537141:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5531611-5531686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5527876-5528094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5527114-5527201:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5521309-5521461:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5518389-5518486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5516448-5516623:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5514014-5514180:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5504737-5504790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5500421-5500612:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5493747-5494118:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5492482-5492613:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5491642-5491740:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5491126-5491206:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5490759-5490875:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5488203-5489336:-1:exon

Epb41l3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Epb41l3
product: erythrocyte membrane protein band 4.1 like 3, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363499.1
SIO_010081: Epb41l3
subclass of: SO_0000673
so part of: Epb41l3
location: complement(join(5488203..5489336,5491126..5491206,5491642..5491740,5492482..5492613,5493747..5494118,5497381..5497455,5500421..5500612,5504737..5504790,5514014..5514234,5516448..5516623,5518389..5518486,5521309..5521461,5527114..5527201,5527876..5528094,5531611..5531686,5537099..5537141,5538645..5538749,5569054..5569251,5574775..5574980,5633473..5633632))
location: region:5488203-5633632:-1
so has part: feature:5633473-5633632:-1:exon
so has part: feature:5574775-5574980:-1:exon
so has part: feature:5569054-5569251:-1:exon
so has part: feature:5538645-5538749:-1:exon
so has part: feature:5537099-5537141:-1:exon
so has part: feature:5531611-5531686:-1:exon
so has part: feature:5527876-5528094:-1:exon
so has part: feature:5527114-5527201:-1:exon
so has part: feature:5521309-5521461:-1:exon
so has part: feature:5518389-5518486:-1:exon
so has part: feature:5516448-5516623:-1:exon
so has part: feature:5514014-5514234:-1:exon
so has part: feature:5504737-5504790:-1:exon
so has part: feature:5500421-5500612:-1:exon
so has part: feature:5497381-5497455:-1:exon
so has part: feature:5493747-5494118:-1:exon
so has part: feature:5492482-5492613:-1:exon
so has part: feature:5491642-5491740:-1:exon
so has part: feature:5491126-5491206:-1:exon
so has part: feature:5488203-5489336:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5633473-5633632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5574775-5574980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5569054-5569251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5538645-5538749:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5537099-5537141:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5531611-5531686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5527876-5528094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5527114-5527201:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5521309-5521461:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5518389-5518486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5516448-5516623:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5514014-5514234:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5504737-5504790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5500421-5500612:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5497381-5497455:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5493747-5494118:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5492482-5492613:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5491642-5491740:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5491126-5491206:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5488203-5489336:-1:exon

Epb41l3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Epb41l3
product: erythrocyte membrane protein band 4.1 like 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363496.1
SIO_010081: Epb41l3
subclass of: SO_0000673
so part of: Epb41l3
location: complement(join(5488203..5489336,5490759..5490875,5491126..5491206,5491642..5491740,5492482..5492613,5493747..5494118,5497381..5497455,5500421..5500612,5514014..5514234,5516448..5516623,5518389..5518486,5521309..5521461,5527114..5527201,5527876..5528094,5531611..5531686,5537099..5537141,5538645..5538749,5569054..5569251,5574775..5574980,5633473..5633631))
location: region:5488203-5633631:-1
so has part: feature:5633473-5633631:-1:exon
so has part: feature:5574775-5574980:-1:exon
so has part: feature:5569054-5569251:-1:exon
so has part: feature:5538645-5538749:-1:exon
so has part: feature:5537099-5537141:-1:exon
so has part: feature:5531611-5531686:-1:exon
so has part: feature:5527876-5528094:-1:exon
so has part: feature:5527114-5527201:-1:exon
so has part: feature:5521309-5521461:-1:exon
so has part: feature:5518389-5518486:-1:exon
so has part: feature:5516448-5516623:-1:exon
so has part: feature:5514014-5514234:-1:exon
so has part: feature:5500421-5500612:-1:exon
so has part: feature:5497381-5497455:-1:exon
so has part: feature:5493747-5494118:-1:exon
so has part: feature:5492482-5492613:-1:exon
so has part: feature:5491642-5491740:-1:exon
so has part: feature:5491126-5491206:-1:exon
so has part: feature:5490759-5490875:-1:exon
so has part: feature:5488203-5489336:-1:exon

position:5633631:-1
position: 5633631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5633473-5633631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5574775-5574980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5569054-5569251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5538645-5538749:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5537099-5537141:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5531611-5531686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5527876-5528094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5527114-5527201:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5521309-5521461:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5518389-5518486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5516448-5516623:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5514014-5514234:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5500421-5500612:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5497381-5497455:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5493747-5494118:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5492482-5492613:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5491642-5491740:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5491126-5491206:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5490759-5490875:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5488203-5489336:-1:exon

Epb41l3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Epb41l3
product: erythrocyte membrane protein band 4.1 like 3, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363498.1
SIO_010081: Epb41l3
subclass of: SO_0000673
so part of: Epb41l3
location: complement(join(5488203..5489336,5490759..5490875,5491126..5491206,5491642..5491740,5492482..5492613,5493747..5494118,5500421..5500612,5504737..5504790,5514014..5514234,5516448..5516623,5518389..5518486,5521309..5521461,5527114..5527201,5527876..5528094,5531611..5531686,5537099..5537141,5538645..5538749,5569054..5569251,5574775..5574980,5633473..5633626))
location: region:5488203-5633626:-1
so has part: feature:5633473-5633626:-1:exon
so has part: feature:5574775-5574980:-1:exon
so has part: feature:5569054-5569251:-1:exon
so has part: feature:5538645-5538749:-1:exon
so has part: feature:5537099-5537141:-1:exon
so has part: feature:5531611-5531686:-1:exon
so has part: feature:5527876-5528094:-1:exon
so has part: feature:5527114-5527201:-1:exon
so has part: feature:5521309-5521461:-1:exon
so has part: feature:5518389-5518486:-1:exon
so has part: feature:5516448-5516623:-1:exon
so has part: feature:5514014-5514234:-1:exon
so has part: feature:5504737-5504790:-1:exon
so has part: feature:5500421-5500612:-1:exon
so has part: feature:5493747-5494118:-1:exon
so has part: feature:5492482-5492613:-1:exon
so has part: feature:5491642-5491740:-1:exon
so has part: feature:5491126-5491206:-1:exon
so has part: feature:5490759-5490875:-1:exon
so has part: feature:5488203-5489336:-1:exon

position:5633626:-1
position: 5633626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5633473-5633626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5574775-5574980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5569054-5569251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5538645-5538749:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5537099-5537141:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5531611-5531686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5527876-5528094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5527114-5527201:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5521309-5521461:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5518389-5518486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5516448-5516623:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5514014-5514234:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5504737-5504790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5500421-5500612:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5493747-5494118:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5492482-5492613:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5491642-5491740:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5491126-5491206:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5490759-5490875:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5488203-5489336:-1:exon

Epb41l3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Epb41l3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 3 isoform X6
translation: MTTESGSDSESKPDQEAEPREAAGLQGQAGAQPGPPEPPSAGGEEEPALEQFAGAAAHSTPVRREVTDKEREFAAAAAKQLEYQQLEDDKLSQKSSSSKLSRSPLKIVKKPKSMQCKVILLDGSESTCDVEKRSRGQVLFDKVCEHLNLLEKDYFGLTYRDAENQKNWLDPAKEIKKQIRSGVWHFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCSFVTLALLGSYTVQSELGDYDPDECGNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIKIRPGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPKKFLTLGSKFRYSGRTQAQTRRASALIDRPAPYFERSSSKRYTMSRSLDGEVGTGQYATTKGISQTNLITTVTPEKKAEEERDEEEDRRRKAEEATPVAAIRHEGKTDSERTDTAADGETTATEELDKTQDELMKHQTNISELKRTFLETSTDTAITNEWEKRLSTSPVRLAARQEDAPMIEPLVPEEKVETKMESSEVETETSTPHHQPRSAEKVVQETVLVEERREMNVHASGDAGDVGDATAHSTTTDASGVKEREASALTQGAKEEGGGSDKAASEREETATASHKQGEEPGSAVHASEASEQKSHFESSTLKMETMSAGSISPGGGKMDISTKEVPVVHTETKTITYESSQVDSGADLEPGVLMSAQTITSETTSTTTTTHITKTVKGGISETRIEKRIVITGDADIDHDQALAQAIKEAKEQHPDMSVTKVVVHKETEITPEDGEDGLEE
SIO_010081: Epb41l3
subclass of: SO_0000673
so part of: Epb41l3
location: complement(join(5489331..5489336,5490759..5490875,5491126..5491206,5491642..5491740,5492482..5492613,5493747..5494118,5500421..5500612,5504737..5504790,5514014..5514180,5516448..5516623,5518389..5518486,5521309..5521461,5527114..5527201,5527876..5528094,5531611..5531686,5537099..5537141,5538645..5538749,5569054..5569251,5574775..5574969))
location: region:5489331-5574969:-1
so has part: feature:5574775-5574969:-1:exon
so has part: feature:5569054-5569251:-1:exon
so has part: feature:5538645-5538749:-1:exon
so has part: feature:5537099-5537141:-1:exon
so has part: feature:5531611-5531686:-1:exon
so has part: feature:5527876-5528094:-1:exon
so has part: feature:5527114-5527201:-1:exon
so has part: feature:5521309-5521461:-1:exon
so has part: feature:5518389-5518486:-1:exon
so has part: feature:5516448-5516623:-1:exon
so has part: feature:5514014-5514180:-1:exon
so has part: feature:5504737-5504790:-1:exon
so has part: feature:5500421-5500612:-1:exon
so has part: feature:5493747-5494118:-1:exon
so has part: feature:5492482-5492613:-1:exon
so has part: feature:5491642-5491740:-1:exon
so has part: feature:5491126-5491206:-1:exon
so has part: feature:5490759-5490875:-1:exon
so has part: feature:5489331-5489336:-1:exon

XP_048219457.1
type: Protein
SIO_000068: ncbiprotein

position:5489331:-1
position: 5489331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5574969:-1
position: 5574969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5574775-5574969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5569054-5569251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5538645-5538749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5537099-5537141:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5531611-5531686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5527876-5528094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5527114-5527201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5521309-5521461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5518389-5518486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5516448-5516623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5514014-5514180:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5504737-5504790:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5500421-5500612:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5493747-5494118:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5492482-5492613:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5491642-5491740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5491126-5491206:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5490759-5490875:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5489331-5489336:-1:exon

Epb41l3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Epb41l3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 3 isoform X3
translation: MTTESGSDSESKPDQEAEPREAAGLQGQAGAQPGPPEPPSAGGEEEPALEQFAGAAAHSTPVRREVTDKEREFAAAAAKQLEYQQLEDDKLSQKSSSSKLSRSPLKIVKKPKSMQCKVILLDGSESTCDVEKRSRGQVLFDKVCEHLNLLEKDYFGLTYRDAENQKNWLDPAKEIKKQIRSGVWHFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCSFVTLALLGSYTVQSELGDYDPDECGNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIKIRPGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPKKFLTLGSKFRYSGRTQAQTRRASALIDRPAPYFERSSSKRYTMSRSLDGEVGTGQYATTKGISQTNLITTVTPEKKAEEERDEEEDRRRKAEEATPVAAIRHEGKTDSERTDTAADGETTATEELDKTQDELMKHQTNISELKRTFLETSTDTAITNEWEKRLSTSPVRLAARQEDAPMIEPLVPEETKEERESSEKVIFLQQGSSPFLGSQKVETKMESSEVETETSTPHHQPRSAEKVVQETVLVEERREMNVHASGDAGDVGDATAHSTTTDASGVKEREASALTQGAKEEGGGSDKAASEREETATASHKQGEEPGSAVHASEASEQKSHFESSTLKMETMSAGSISPGGGKMDISTKEVPVVHTETKTITYESSQVDSGADLEPGVLMSAQTITSETTSTTTTTHITKTVKGGISETRIEKRIVITGDADIDHDQALAQAIKEAKEQHPDMSVTKVVVHKETEITPEDGEDGLEE
SIO_010081: Epb41l3
subclass of: SO_0000673
so part of: Epb41l3
location: complement(join(5489331..5489336,5490759..5490875,5491126..5491206,5491642..5491740,5492482..5492613,5493747..5494118,5497381..5497455,5500421..5500612,5504737..5504790,5514014..5514180,5516448..5516623,5518389..5518486,5521309..5521461,5527114..5527201,5527876..5528094,5531611..5531686,5537099..5537141,5538645..5538749,5569054..5569251,5574775..5574969))
location: region:5489331-5574969:-1
so has part: feature:5574775-5574969:-1:exon
so has part: feature:5569054-5569251:-1:exon
so has part: feature:5538645-5538749:-1:exon
so has part: feature:5537099-5537141:-1:exon
so has part: feature:5531611-5531686:-1:exon
so has part: feature:5527876-5528094:-1:exon
so has part: feature:5527114-5527201:-1:exon
so has part: feature:5521309-5521461:-1:exon
so has part: feature:5518389-5518486:-1:exon
so has part: feature:5516448-5516623:-1:exon
so has part: feature:5514014-5514180:-1:exon
so has part: feature:5504737-5504790:-1:exon
so has part: feature:5500421-5500612:-1:exon
so has part: feature:5497381-5497455:-1:exon
so has part: feature:5493747-5494118:-1:exon
so has part: feature:5492482-5492613:-1:exon
so has part: feature:5491642-5491740:-1:exon
so has part: feature:5491126-5491206:-1:exon
so has part: feature:5490759-5490875:-1:exon
so has part: feature:5489331-5489336:-1:exon

XP_048219454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5574775-5574969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5569054-5569251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5538645-5538749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5537099-5537141:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5531611-5531686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5527876-5528094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5527114-5527201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5521309-5521461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5518389-5518486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5516448-5516623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5514014-5514180:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5504737-5504790:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5500421-5500612:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5497381-5497455:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5493747-5494118:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5492482-5492613:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5491642-5491740:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5491126-5491206:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5490759-5490875:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5489331-5489336:-1:exon

Epb41l3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Epb41l3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 3 isoform X2
translation: MTTESGSDSESKPDQEAEPREAAGLQGQAGAQPGPPEPPSAGGEEEPALEQFAGAAAHSTPVRREVTDKEREFAAAAAKQLEYQQLEDDKLSQKSSSSKLSRSPLKIVKKPKSMQCKVILLDGSESTCDVEKRSRGQVLFDKVCEHLNLLEKDYFGLTYRDAENQKNWLDPAKEIKKQIRSGVWHFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCSFVTLALLGSYTVQSELGDYDPDECGNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIKIRPGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPKKFLTLGSKFRYSGRTQAQTRRASALIDRPAPYFERSSSKRYTMSRSLDGASVNENHEIYMKDSMSAAEVGTGQYATTKGISQTNLITTVTPEKKAEEERDEEEDRRRKAEEATPVAAIRHEGKELDKTQDELMKHQTNISELKRTFLETSTDTAITNEWEKRLSTSPVRLAARQEDAPMIEPLVPEETKEERESSEKVIFLQQGSSPFLGSQKVETKMESSEVETETSTPHHQPRSAEKVVQETVLVEERREMNVHASGDAGDVGDATAHSTTTDASGVKEREASALTQGAKEEGGGSDKAASEREETATASHKQGEEPGSAVHASEASEQKSHFESSTLKMETMSAGSISPGGGKMDISTKEVPVVHTETKTITYESSQVDSGADLEPGVLMSAQTITSETTSTTTTTHITKTVKGGISETRIEKRIVITGDADIDHDQALAQAIKEAKEQHPDMSVTKVVVHKETEITPEDGEDGLEE
SIO_010081: Epb41l3
subclass of: SO_0000673
so part of: Epb41l3
location: complement(join(5489331..5489336,5490759..5490875,5491126..5491206,5491642..5491740,5492482..5492613,5493747..5494118,5497381..5497455,5500421..5500612,5514014..5514234,5516448..5516623,5518389..5518486,5521309..5521461,5527114..5527201,5527876..5528094,5531611..5531686,5537099..5537141,5538645..5538749,5569054..5569251,5574775..5574969))
location: region:5489331-5574969:-1
so has part: feature:5574775-5574969:-1:exon
so has part: feature:5569054-5569251:-1:exon
so has part: feature:5538645-5538749:-1:exon
so has part: feature:5537099-5537141:-1:exon
so has part: feature:5531611-5531686:-1:exon
so has part: feature:5527876-5528094:-1:exon
so has part: feature:5527114-5527201:-1:exon
so has part: feature:5521309-5521461:-1:exon
so has part: feature:5518389-5518486:-1:exon
so has part: feature:5516448-5516623:-1:exon
so has part: feature:5514014-5514234:-1:exon
so has part: feature:5500421-5500612:-1:exon
so has part: feature:5497381-5497455:-1:exon
so has part: feature:5493747-5494118:-1:exon
so has part: feature:5492482-5492613:-1:exon
so has part: feature:5491642-5491740:-1:exon
so has part: feature:5491126-5491206:-1:exon
so has part: feature:5490759-5490875:-1:exon
so has part: feature:5489331-5489336:-1:exon

XP_048219453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5574775-5574969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5569054-5569251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5538645-5538749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5537099-5537141:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5531611-5531686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5527876-5528094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5527114-5527201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5521309-5521461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5518389-5518486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5516448-5516623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5514014-5514234:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5500421-5500612:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5497381-5497455:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5493747-5494118:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5492482-5492613:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5491642-5491740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5491126-5491206:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5490759-5490875:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5489331-5489336:-1:exon

Epb41l3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Epb41l3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 3 isoform X4
translation: MTTESGSDSESKPDQEAEPREAAGLQGQAGAQPGPPEPPSAGGEEEPALEQFAGAAAHSTPVRREVTDKEREFAAAAAKQLEYQQLEDDKLSQKSSSSKLSRSPLKIVKKPKSMQCKVILLDGSESTCDVEKRSRGQVLFDKVCEHLNLLEKDYFGLTYRDAENQKNWLDPAKEIKKQIRSGVWHFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCSFVTLALLGSYTVQSELGDYDPDECGNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIKIRPGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPKKFLTLGSKFRYSGRTQAQTRRASALIDRPAPYFERSSSKRYTMSRSLDGASVNENHEIYMKDSMSAAEVGTGQYATTKGISQTNLITTVTPEKKAEEERDEEEDRRRKAEEATPVAAIRHEGKTDSERTDTAADGETTATEELDKTQDELMKHQTNISELKRTFLETSTDTAITNEWEKRLSTSPVRLAARQEDAPMIEPLVPEEKVETKMESSEVETETSTPHHQPRSAEKVVQETVLVEERREMNVHASGDAGDVGDATAHSTTTDASGVKEREASALTQGAKEEGGGSDKAASEREETATASHKQGEEPGSAVHASEASEQKSHFESSTLKMETMSAGSISPGGGKMDISTKEVPVVHTETKTITYESSQVDSGADLEPGVLMSAQTITSETTSTTTTTHITKTVKGGISETRIEKRIVITGDADIDHDQALAQAIKEAKEQHPDMSVTKVVVHKETEITPEDGEDGLEE
SIO_010081: Epb41l3
subclass of: SO_0000673
so part of: Epb41l3
location: complement(join(5489331..5489336,5490759..5490875,5491126..5491206,5491642..5491740,5492482..5492613,5493747..5494118,5500421..5500612,5504737..5504790,5514014..5514234,5516448..5516623,5518389..5518486,5521309..5521461,5527114..5527201,5527876..5528094,5531611..5531686,5537099..5537141,5538645..5538749,5569054..5569251,5574775..5574969))
location: region:5489331-5574969:-1
so has part: feature:5574775-5574969:-1:exon
so has part: feature:5569054-5569251:-1:exon
so has part: feature:5538645-5538749:-1:exon
so has part: feature:5537099-5537141:-1:exon
so has part: feature:5531611-5531686:-1:exon
so has part: feature:5527876-5528094:-1:exon
so has part: feature:5527114-5527201:-1:exon
so has part: feature:5521309-5521461:-1:exon
so has part: feature:5518389-5518486:-1:exon
so has part: feature:5516448-5516623:-1:exon
so has part: feature:5514014-5514234:-1:exon
so has part: feature:5504737-5504790:-1:exon
so has part: feature:5500421-5500612:-1:exon
so has part: feature:5493747-5494118:-1:exon
so has part: feature:5492482-5492613:-1:exon
so has part: feature:5491642-5491740:-1:exon
so has part: feature:5491126-5491206:-1:exon
so has part: feature:5490759-5490875:-1:exon
so has part: feature:5489331-5489336:-1:exon

XP_048219455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5574775-5574969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5569054-5569251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5538645-5538749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5537099-5537141:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5531611-5531686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5527876-5528094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5527114-5527201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5521309-5521461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5518389-5518486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5516448-5516623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5514014-5514234:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5504737-5504790:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5500421-5500612:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5493747-5494118:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5492482-5492613:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5491642-5491740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5491126-5491206:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5490759-5490875:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5489331-5489336:-1:exon

Epb41l3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Epb41l3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 3 isoform X5
translation: MTTESGSDSESKPDQEAEPREAAGLQGQAGAQPGPPEPPSAGGEEEPALEQFAGAAAHSTPVRREVTDKEREFAAAAAKQLEYQQLEDDKLSQKSSSSKLSRSPLKIVKKPKSMQCKVILLDGSESTCDVEKRSRGQVLFDKVCEHLNLLEKDYFGLTYRDAENQKNWLDPAKEIKKQIRSGVWHFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCSFVTLALLGSYTVQSELGDYDPDECGNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIKIRPGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPKKFLTLGSKFRYSGRTQAQTRRASALIDRPAPYFERSSSKRYTMSRSLDGASVNENHEIYMKDSMSAAEVGTGQYATTKGISQTNLITTVTPEKKAEEERDEEEDRRRKAEEATPVAAIRHEGKTDSERTDTAADGETTATEELDKTQDELMKHQTNISELKRTFLETSTDTAITNEWEKRLSTSPVRLAARQEDAPMIEPLVPEETKEERESSEKVIFLQQGSSPFLGSQKVETKMESSEVETETSTPHHQPRSAEKVVQETVLVEERREMNVHASGDAGDVGDATAHSTTTDASGVKEREASALTQGAKEEGGGSDKAASEREETATASHKQGEEPGSAVHASEASEQKSHFESSTLKMETMSAGSISPGGGKMDISTKEVPVVHTETKTITYESSQVDSGADLEPGVLMSAQTITSETTSTTTTTHITKTVKGGISETRIEKRIVITGDADIDHDQE
SIO_010081: Epb41l3
subclass of: SO_0000673
so part of: Epb41l3
location: complement(join(5489331..5489336,5491126..5491206,5491642..5491740,5492482..5492613,5493747..5494118,5497381..5497455,5500421..5500612,5504737..5504790,5514014..5514234,5516448..5516623,5518389..5518486,5521309..5521461,5527114..5527201,5527876..5528094,5531611..5531686,5537099..5537141,5538645..5538749,5569054..5569251,5574775..5574969))
location: region:5489331-5574969:-1
so has part: feature:5574775-5574969:-1:exon
so has part: feature:5569054-5569251:-1:exon
so has part: feature:5538645-5538749:-1:exon
so has part: feature:5537099-5537141:-1:exon
so has part: feature:5531611-5531686:-1:exon
so has part: feature:5527876-5528094:-1:exon
so has part: feature:5527114-5527201:-1:exon
so has part: feature:5521309-5521461:-1:exon
so has part: feature:5518389-5518486:-1:exon
so has part: feature:5516448-5516623:-1:exon
so has part: feature:5514014-5514234:-1:exon
so has part: feature:5504737-5504790:-1:exon
so has part: feature:5500421-5500612:-1:exon
so has part: feature:5497381-5497455:-1:exon
so has part: feature:5493747-5494118:-1:exon
so has part: feature:5492482-5492613:-1:exon
so has part: feature:5491642-5491740:-1:exon
so has part: feature:5491126-5491206:-1:exon
so has part: feature:5489331-5489336:-1:exon

XP_048219456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5574775-5574969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5569054-5569251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5538645-5538749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5537099-5537141:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5531611-5531686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5527876-5528094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5527114-5527201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5521309-5521461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5518389-5518486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5516448-5516623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5514014-5514234:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5504737-5504790:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5500421-5500612:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5497381-5497455:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5493747-5494118:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5492482-5492613:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5491642-5491740:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5491126-5491206:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5489331-5489336:-1:exon

Epb41l3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Epb41l3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 3 isoform X1
translation: MTTESGSDSESKPDQEAEPREAAGLQGQAGAQPGPPEPPSAGGEEEPALEQFAGAAAHSTPVRREVTDKEREFAAAAAKQLEYQQLEDDKLSQKSSSSKLSRSPLKIVKKPKSMQCKVILLDGSESTCDVEKRSRGQVLFDKVCEHLNLLEKDYFGLTYRDAENQKNWLDPAKEIKKQIRSGVWHFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCSFVTLALLGSYTVQSELGDYDPDECGNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIKIRPGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPKKFLTLGSKFRYSGRTQAQTRRASALIDRPAPYFERSSSKRYTMSRSLDGASVNENHEIYMKDSMSAAEVGTGQYATTKGISQTNLITTVTPEKKAEEERDEEEDRRRKAEEATPVAAIRHEGKTDSERTDTAADGETTATEELDKTQDELMKHQTNISELKRTFLETSTDTAITNEWEKRLSTSPVRLAARQEDAPMIEPLVPEETKEERESSEKVIFLQQGSSPFLGSQKVETKMESSEVETETSTPHHQPRSAEKVVQETVLVEERREMNVHASGDAGDVGDATAHSTTTDASGVKEREASALTQGAKEEGGGSDKAASEREETATASHKQGEEPGSAVHASEASEQKSHFESSTLKMETMSAGSISPGGGKMDISTKEVPVVHTETKTITYESSQVDSGADLEPGVLMSAQTITSETTSTTTTTHITKTVKGGISETRIEKRIVITGDADIDHDQALAQAIKEAKEQHPDMSVTKVVVHKETEITPEDGEDGLEE
SIO_010081: Epb41l3
subclass of: SO_0000673
so part of: Epb41l3
location: complement(join(5489331..5489336,5490759..5490875,5491126..5491206,5491642..5491740,5492482..5492613,5493747..5494118,5497381..5497455,5500421..5500612,5504737..5504790,5514014..5514234,5516448..5516623,5518389..5518486,5521309..5521461,5527114..5527201,5527876..5528094,5531611..5531686,5537099..5537141,5538645..5538749,5569054..5569251,5574775..5574969))
location: region:5489331-5574969:-1
so has part: feature:5574775-5574969:-1:exon
so has part: feature:5569054-5569251:-1:exon
so has part: feature:5538645-5538749:-1:exon
so has part: feature:5537099-5537141:-1:exon
so has part: feature:5531611-5531686:-1:exon
so has part: feature:5527876-5528094:-1:exon
so has part: feature:5527114-5527201:-1:exon
so has part: feature:5521309-5521461:-1:exon
so has part: feature:5518389-5518486:-1:exon
so has part: feature:5516448-5516623:-1:exon
so has part: feature:5514014-5514234:-1:exon
so has part: feature:5504737-5504790:-1:exon
so has part: feature:5500421-5500612:-1:exon
so has part: feature:5497381-5497455:-1:exon
so has part: feature:5493747-5494118:-1:exon
so has part: feature:5492482-5492613:-1:exon
so has part: feature:5491642-5491740:-1:exon
so has part: feature:5491126-5491206:-1:exon
so has part: feature:5490759-5490875:-1:exon
so has part: feature:5489331-5489336:-1:exon

XP_048219452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5574775-5574969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5569054-5569251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5538645-5538749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5537099-5537141:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5531611-5531686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5527876-5528094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5527114-5527201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5521309-5521461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5518389-5518486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5516448-5516623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5514014-5514234:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5504737-5504790:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5500421-5500612:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5497381-5497455:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5493747-5494118:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5492482-5492613:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5491642-5491740:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5491126-5491206:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5490759-5490875:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5489331-5489336:-1:exon

Epb41l3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Epb41l3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 3 isoform X7
translation: MTTESGSDSESKPDQEAEPREAAGLQGQAGAQPGPPEPPSAGGEEEPALEQFAGAAAHSTPVRREVTDKEREFAAAAAKQLEYQQLEDDKLSQKSSSSKLSRSPLKIVKKPKSMQCKVILLDGSESTCDVEKRSRGQVLFDKVCEHLNLLEKDYFGLTYRDAENQKNWLDPAKEIKKQIRSGVWHFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCSFVTLALLGSYTVQSELGDYDPDECGNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIKIRPGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPKKFLTLGSKFRYSGRTQAQTRRASALIDRPAPYFERSSSKRYTMSRSLDGASVNENHEIYMKDSMSAAEVGTGQYATTKGISQTNLITTVTPEKKAEEERDEEEDRRRKAEEATPVAAIRHEGKSPRHGTDSCPLSPSSTHFDPTSPTELRRRCKENERKPAGPELPPAERLPGEPALDKDSQGKAYLGDQDVACSYRPQSGKGTTLFSFSLQLPDSFPSLLDDDGYLSFPNLSESNLLPQSLQNYLPIRSPSLVPCFLFIFFFLLSASFSVPYALTLSFPLALCLCYLEPKAASLSASLDNDPSDSSEEETDSERTDTAADGETTATESDQEEDAELKAQELDKTQDELMKHQTNISELKRTFLETSTDTAITNEWEKRLSTSPVRLAARQEDAPMIEPLVPEETKEERESSEKVIFLQQGSSPFLGSQTKQSSGEKLMDGSEIFSLLESARKPTEFIGGVTSTSQSWVQKVETKMESSEVETETSTPHHQPRSAEKVVQETVLVEERREMNVHASGDAGDVGDATAHSTTTDASGVKEREASALTQGAKEEGGGSDKAASEREETATASHKQGEEPGSAVHASEASEQKSHFESSTLKMETMSAGSISPGGGKMDISTKEVPVVHTETKTITYESSQVDSGADLEPGVLMSAQTITSETTSTTTTTHITKTVKGGISETRIEKRIVITGDADIDHDQALAQAIKEAKEQHPDMSVTKVVVHKETEITPEDGEDGLEE
SIO_010081: Epb41l3
subclass of: SO_0000673
so part of: Epb41l3
location: complement(join(5489331..5489336,5490759..5490875,5491126..5491206,5491642..5491740,5492482..5492613,5493747..5494118,5494682..5494804,5497381..5497455,5500421..5500612,5501341..5501376,5504737..5504790,5509968..5510528,5514014..5514234,5516448..5516623,5518389..5518486,5521309..5521461,5527114..5527201,5527876..5528094,5531611..5531686,5537099..5537141,5538645..5538749,5569054..5569251,5574775..5574969))
location: region:5489331-5574969:-1
so has part: feature:5574775-5574969:-1:exon
so has part: feature:5569054-5569251:-1:exon
so has part: feature:5538645-5538749:-1:exon
so has part: feature:5537099-5537141:-1:exon
so has part: feature:5531611-5531686:-1:exon
so has part: feature:5527876-5528094:-1:exon
so has part: feature:5527114-5527201:-1:exon
so has part: feature:5521309-5521461:-1:exon
so has part: feature:5518389-5518486:-1:exon
so has part: feature:5516448-5516623:-1:exon
so has part: feature:5514014-5514234:-1:exon
so has part: feature:5509968-5510528:-1:exon
so has part: feature:5504737-5504790:-1:exon
so has part: feature:5501341-5501376:-1:exon
so has part: feature:5500421-5500612:-1:exon
so has part: feature:5497381-5497455:-1:exon
so has part: feature:5494682-5494804:-1:exon
so has part: feature:5493747-5494118:-1:exon
so has part: feature:5492482-5492613:-1:exon
so has part: feature:5491642-5491740:-1:exon
so has part: feature:5491126-5491206:-1:exon
so has part: feature:5490759-5490875:-1:exon
so has part: feature:5489331-5489336:-1:exon

XP_048219458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5574775-5574969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5569054-5569251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5538645-5538749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5537099-5537141:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5531611-5531686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5527876-5528094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5527114-5527201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5521309-5521461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5518389-5518486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5516448-5516623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5514014-5514234:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5509968-5510528:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5504737-5504790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5501341-5501376:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5500421-5500612:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5497381-5497455:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5494682-5494804:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5493747-5494118:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5492482-5492613:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5491642-5491740:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5491126-5491206:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5490759-5490875:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5489331-5489336:-1:exon

Tmem200c
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Tmem200c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5954890..5966698)
location: region:5954890-5966698:-1
so has part: feature:5954890-5966698:-1:exon
subclass of: SO_0000010

125364032
type: Gene
SIO_000068: ncbigene

position:5954890:-1
position: 5954890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5966698:-1
position: 5966698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5954890-5966698:-1:exon

Tmem200c
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 214514
gene: Tmem200c
product: transmembrane protein 200C, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007213401.1
SIO_010081: Tmem200c
so part of: Tmem200c
location: complement(join(5954890..5957004,5961323..5963500,5966347..5966698))
location: region:5954890-5966698:-1
so has part: feature:5966347-5966698:-1:exon
so has part: feature:5961323-5963500:-1:exon
so has part: feature:5954890-5957004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5966347-5966698:-1:exon

position:5966347:-1
position: 5966347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5961323-5963500:-1:exon

position:5961323:-1
position: 5961323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5963500:-1
position: 5963500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5954890-5957004:-1:exon

position:5957004:-1
position: 5957004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tmem200c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Tmem200c
product: transmembrane protein 200C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048363438.1
SIO_010081: Tmem200c
subclass of: SO_0000673
so part of: Tmem200c
location: complement(join(5959345..5963500,5966347..5966698))
location: region:5959345-5966698:-1
so has part: feature:5966347-5966698:-1:exon
so has part: feature:5959345-5963500:-1:exon

position:5959345:-1
position: 5959345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5966347-5966698:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5959345-5963500:-1:exon

Tmem200c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Tmem200c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 200C
translation: MIATGGLLRISARKQDPLRPPSQLPKRKRKAKRRRKNDVVVVKGKLKLCSVSGLIALCGILVLLVGIAMAVVGYWPKTNGAPREGARQPAGSGLRVPPSAANLSRGASGGHARTPGGVNFSSAGAPPGTPPAPPARPASAAAAAASSASTAASVGFFFRIFSGYLHSDKLKVFGPLIMGIGIFLFICANAVLHENRDKKTKVINLRDLYSTVIDVHSLRAKDLAAAAAAAAASASAPASATPGAAPLNGFLSYAQSRGLELKPGGCAGSRDAFGAAALLARGSWPHPGAASGGGALGPASPPDPEASPGCPREPPSLAEAVYSIYRERSCLASRRRTVIAAAAAAPAARTTAASGGSSPAPGSPPESWGRQSTASSLVGSSLSALALVPFQGDRDGDRDGDGDAQGASCSWHRPPGERGAREIPRGELDLSLTELRGAEGGARWAAGEPGAPGEPAEGATPARAARGQGGRLPRTGGKATWRRRSTSGLPDYRAPPSPEPPPSSSRAAGDAAAPPDRDADPASPLRSDDSPRARRDSRSSRAEEPSGSRHKGYTALREADTSVESVVEEAGVGQSPAEGPGQEAPEARSPRGVQRHFTNKEKLLMVSRSPAEAGEGQDRDPEGSAGV
SIO_010081: Tmem200c
subclass of: SO_0000673
so part of: Tmem200c
location: complement(5961530..5963413)
location: region:5961530-5963413:-1
so has part: feature:5961530-5963413:-1:exon

XP_048219395.1
type: Protein
SIO_000068: ncbiprotein

position:5961530:-1
position: 5961530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5963413:-1
position: 5963413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5961530-5963413:-1:exon

L3mbtl4
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: L3mbtl4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6028873..6322773)
location: region:6028873-6322773:-1
so has part: feature:6028873-6322773:-1:exon
subclass of: SO_0000010

125364138
type: Gene
SIO_000068: ncbigene

position:6028873:-1
position: 6028873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6322773:-1
position: 6322773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6028873-6322773:-1:exon

L3mbtl4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: L3mbtl4
product: L3MBTL histone methyl-lysine binding protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048363591.1
SIO_010081: L3mbtl4
subclass of: SO_0000673
so part of: L3mbtl4
location: complement(join(6028873..6029764,6032131..6032193,6041059..6041219,6053394..6053420,6115110..6115180,6124963..6125136,6166648..6166750,6187180..6187294,6226621..6226731,6229585..6229670,6249033..6249109,6250377..6250531,6252050..6252141,6254028..6254163,6255162..6255266,6278799..6278890,6307177..6307228,6321536..6321637,6322706..6322773))
location: region:6028873-6322773:-1
so has part: feature:6322706-6322773:-1:exon
so has part: feature:6321536-6321637:-1:exon
so has part: feature:6307177-6307228:-1:exon
so has part: feature:6278799-6278890:-1:exon
so has part: feature:6255162-6255266:-1:exon
so has part: feature:6254028-6254163:-1:exon
so has part: feature:6252050-6252141:-1:exon
so has part: feature:6250377-6250531:-1:exon
so has part: feature:6249033-6249109:-1:exon
so has part: feature:6229585-6229670:-1:exon
so has part: feature:6226621-6226731:-1:exon
so has part: feature:6187180-6187294:-1:exon
so has part: feature:6166648-6166750:-1:exon
so has part: feature:6124963-6125136:-1:exon
so has part: feature:6115110-6115180:-1:exon
so has part: feature:6053394-6053420:-1:exon
so has part: feature:6041059-6041219:-1:exon
so has part: feature:6032131-6032193:-1:exon
so has part: feature:6028873-6029764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6322706-6322773:-1:exon

position:6322706:-1
position: 6322706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6321536-6321637:-1:exon

position:6321536:-1
position: 6321536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6321637:-1
position: 6321637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6307177-6307228:-1:exon

position:6307177:-1
position: 6307177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6307228:-1
position: 6307228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6278799-6278890:-1:exon

position:6278799:-1
position: 6278799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6278890:-1
position: 6278890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6255162-6255266:-1:exon

position:6255162:-1
position: 6255162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6255266:-1
position: 6255266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6254028-6254163:-1:exon

position:6254028:-1
position: 6254028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6254163:-1
position: 6254163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6252050-6252141:-1:exon

position:6252050:-1
position: 6252050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6252141:-1
position: 6252141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6250377-6250531:-1:exon

position:6250377:-1
position: 6250377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6250531:-1
position: 6250531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6249033-6249109:-1:exon

position:6249033:-1
position: 6249033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6249109:-1
position: 6249109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6229585-6229670:-1:exon

position:6229585:-1
position: 6229585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6229670:-1
position: 6229670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6226621-6226731:-1:exon

position:6226621:-1
position: 6226621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6226731:-1
position: 6226731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6187180-6187294:-1:exon

position:6187180:-1
position: 6187180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6187294:-1
position: 6187294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6166648-6166750:-1:exon

position:6166648:-1
position: 6166648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6166750:-1
position: 6166750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6124963-6125136:-1:exon

position:6124963:-1
position: 6124963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6125136:-1
position: 6125136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6115110-6115180:-1:exon

position:6115110:-1
position: 6115110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6115180:-1
position: 6115180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6053394-6053420:-1:exon

position:6053394:-1
position: 6053394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6053420:-1
position: 6053420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6041059-6041219:-1:exon

position:6041059:-1
position: 6041059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6041219:-1
position: 6041219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6032131-6032193:-1:exon

position:6032131:-1
position: 6032131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6032193:-1
position: 6032193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6028873-6029764:-1:exon

position:6029764:-1
position: 6029764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

L3mbtl4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: L3mbtl4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 4
translation: MKQPSRKRKLSMDSKEHVGQDGRLEQAEEKKPKDSTALSSHAPSTATQEAWSWEQYLKEQKATAAPVELFSKDQSFPEHENGFQIGMRLEGIDPRHPSVFCVLSVAEVCGYRLRLHFDGYLSCYDFWINAGSPDIHPVGWCGRTKHELHIPKGYRKDKFVWMDYLKACKLQNAPKKLFRNRSSNGLMSKELQVGMKLEAVDRKNPSLVCVATIADIVEDRLRVHFDNRDESYDYWCDVSSPYVQPVGWCQENGRPLIAPPGYTDPENFSWTEYLEATQTNAVPAKVLKMRGPHGFLPDMKLEVVDKRNPRLIRVATVIDVDDHRVKVHFDGWDHKYDYWMGVDSPDLHPIGWCDVTGHPLEVPLWANDVKVLPGQAVCPTPGCRGIGHIRGPRYAGHHSAFGCPYSDMNLKKEVTLADGLREQTGVPLRSGTPHSTLNSLCGLNFNGKHAKVNSQHRLVQQAKCLKIKGKEDVDLDNLFRVLGLDPQGLEYSAEQTQQPLHPSIFMSTHPFRDVSVGREQHFKLLPGVAGIQASQVAGWTVEEVAEFVQSLLGCEEQAKCFEKEQIDGKAFLLLTQTDIVKVMKIKLGPALKIYNSILMFKASQDLTEDAALSQEARG
SIO_010081: L3mbtl4
subclass of: SO_0000673
so part of: L3mbtl4
location: complement(join(6029600..6029764,6032131..6032193,6041059..6041219,6053394..6053420,6115110..6115180,6124963..6125136,6166648..6166750,6187180..6187294,6226621..6226731,6229585..6229670,6249033..6249109,6250377..6250531,6252050..6252141,6254028..6254163,6255162..6255266,6278799..6278890,6307177..6307228,6321536..6321607))
location: region:6029600-6321607:-1
so has part: feature:6321536-6321607:-1:exon
so has part: feature:6307177-6307228:-1:exon
so has part: feature:6278799-6278890:-1:exon
so has part: feature:6255162-6255266:-1:exon
so has part: feature:6254028-6254163:-1:exon
so has part: feature:6252050-6252141:-1:exon
so has part: feature:6250377-6250531:-1:exon
so has part: feature:6249033-6249109:-1:exon
so has part: feature:6229585-6229670:-1:exon
so has part: feature:6226621-6226731:-1:exon
so has part: feature:6187180-6187294:-1:exon
so has part: feature:6166648-6166750:-1:exon
so has part: feature:6124963-6125136:-1:exon
so has part: feature:6115110-6115180:-1:exon
so has part: feature:6053394-6053420:-1:exon
so has part: feature:6041059-6041219:-1:exon
so has part: feature:6032131-6032193:-1:exon
so has part: feature:6029600-6029764:-1:exon

XP_048219548.1
type: Protein
SIO_000068: ncbiprotein

position:6029600:-1
position: 6029600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6321607:-1
position: 6321607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6321536-6321607:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6307177-6307228:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6278799-6278890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6255162-6255266:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6254028-6254163:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6252050-6252141:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6250377-6250531:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6249033-6249109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6229585-6229670:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6226621-6226731:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6187180-6187294:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6166648-6166750:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6124963-6125136:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6115110-6115180:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6053394-6053420:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6041059-6041219:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6032131-6032193:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6029600-6029764:-1:exon

Arhgap28
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Arhgap28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6635380..6794685
location: region:6635380-6794685:1
so has part: feature:6635380-6794685:1:exon
subclass of: SO_0000010

125364134
type: Gene
SIO_000068: ncbigene

position:6635380:1
position: 6635380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6794685:1
position: 6794685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6635380-6794685:1:exon

Arhgap28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arhgap28
product: Rho GTPase activating protein 28, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048363583.1
SIO_010081: Arhgap28
subclass of: SO_0000673
so part of: Arhgap28
location: join(6635380..6635613,6732495..6732706,6738371..6738588,6748458..6748553,6755397..6755486,6761614..6761698,6763585..6763727,6767186..6767351,6767453..6767544,6770280..6770357,6776195..6776357,6779792..6779874,6782028..6782225,6782944..6783057,6786087..6786143,6787586..6787710,6789934..6789998,6792373..6794685)
location: region:6635380-6794685:1
so has part: feature:6635380-6635613:1:exon
so has part: feature:6732495-6732706:1:exon
so has part: feature:6738371-6738588:1:exon
so has part: feature:6748458-6748553:1:exon
so has part: feature:6755397-6755486:1:exon
so has part: feature:6761614-6761698:1:exon
so has part: feature:6763585-6763727:1:exon
so has part: feature:6767186-6767351:1:exon
so has part: feature:6767453-6767544:1:exon
so has part: feature:6770280-6770357:1:exon
so has part: feature:6776195-6776357:1:exon
so has part: feature:6779792-6779874:1:exon
so has part: feature:6782028-6782225:1:exon
so has part: feature:6782944-6783057:1:exon
so has part: feature:6786087-6786143:1:exon
so has part: feature:6787586-6787710:1:exon
so has part: feature:6789934-6789998:1:exon
so has part: feature:6792373-6794685:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6635380-6635613:1:exon

position:6635613:1
position: 6635613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6732495-6732706:1:exon

position:6732495:1
position: 6732495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6732706:1
position: 6732706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6738371-6738588:1:exon

position:6738371:1
position: 6738371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6738588:1
position: 6738588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6748458-6748553:1:exon

position:6748458:1
position: 6748458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6748553:1
position: 6748553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6755397-6755486:1:exon

position:6755397:1
position: 6755397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6755486:1
position: 6755486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6761614-6761698:1:exon

position:6761614:1
position: 6761614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6761698:1
position: 6761698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6763585-6763727:1:exon

position:6763585:1
position: 6763585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6763727:1
position: 6763727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6767186-6767351:1:exon

position:6767186:1
position: 6767186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6767351:1
position: 6767351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6767453-6767544:1:exon

position:6767453:1
position: 6767453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6767544:1
position: 6767544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6770280-6770357:1:exon

position:6770280:1
position: 6770280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6770357:1
position: 6770357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6776195-6776357:1:exon

position:6776195:1
position: 6776195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6776357:1
position: 6776357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6779792-6779874:1:exon

position:6779792:1
position: 6779792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6779874:1
position: 6779874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6782028-6782225:1:exon

position:6782028:1
position: 6782028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6782225:1
position: 6782225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6782944-6783057:1:exon

position:6782944:1
position: 6782944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6783057:1
position: 6783057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6786087-6786143:1:exon

position:6786087:1
position: 6786087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6786143:1
position: 6786143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6787586-6787710:1:exon

position:6787586:1
position: 6787586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6787710:1
position: 6787710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6789934-6789998:1:exon

position:6789934:1
position: 6789934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6789998:1
position: 6789998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6792373-6794685:1:exon

position:6792373:1
position: 6792373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Arhgap28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arhgap28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 28 isoform X1
translation: MLVPVFVLRPARSHARLRMEVEDSGGVVLTAYHSYARAQPPSAEPRCAPRATASHPLSRKSIPRCRRINRMLSNESLHSPAFSRSNSQASVDSGSMEDFWREIENLKEHSIMEGQEEPPSTPTETKPLDEGELEAEWLQDVGLSTLISGDEEEDGKALLSTLTRTQAAAVKKRYNTYTQTMRKKNKQTVRDVRDIFGVSESPPGDSCDNHATQLDGTEEEKELPEEVPKTRGSTPDGASLNSTAVSDGSPDEDGSLADPSSDSRSRLTAIPDIPVHSNGSSDPGQSVSNELHNGDYLEKNIPAEVEELSFEISYSEMITDAPKRNKYKKSEIKKEECALTKFFVQKTRFGLTEAGDLSAEDMKKIRHLSLIELTAFFDAFRIQLKRSKTEKVKGRDNGIFGVPLTVLLENDRKKDPGVKVPFVLQKFFEKVEESGLESEGIFRLSGCTAKVKQYREELDAKFNADKFKWDKMCHREAAVMLKAFFRELPTSLFPVEYIPAFITLLERGPHIKVQFQALHLMVMALPDANRDTAQALMKFFSKVIANESKNRMSVWNISTVMAPNLFFSRSKHSDCEELQLANTAAHIIRLMLKYQNILWKVPSFLITQVRRMNEATMLLKKQLPSMKKLLRRKTIEREVPTPKTSKVLQKSPSSRRMSDVPEGVIRVHAPLLSKVSMAIQLNSQTKAKDILAKFQYENSHSSSDCIKMQNQRLYEVGGNIGQHCLDPDAYILDVYHVNPHAEWVIKPQPRL
SIO_010081: Arhgap28
subclass of: SO_0000673
so part of: Arhgap28
location: join(6635438..6635613,6732495..6732706,6738371..6738588,6748458..6748553,6755397..6755486,6761614..6761698,6763585..6763727,6767186..6767351,6767453..6767544,6770280..6770357,6776195..6776357,6779792..6779874,6782028..6782225,6782944..6783057,6786087..6786143,6787586..6787710,6789934..6789998,6792373..6792467)
location: region:6635438-6792467:1
so has part: feature:6635438-6635613:1:exon
so has part: feature:6732495-6732706:1:exon
so has part: feature:6738371-6738588:1:exon
so has part: feature:6748458-6748553:1:exon
so has part: feature:6755397-6755486:1:exon
so has part: feature:6761614-6761698:1:exon
so has part: feature:6763585-6763727:1:exon
so has part: feature:6767186-6767351:1:exon
so has part: feature:6767453-6767544:1:exon
so has part: feature:6770280-6770357:1:exon
so has part: feature:6776195-6776357:1:exon
so has part: feature:6779792-6779874:1:exon
so has part: feature:6782028-6782225:1:exon
so has part: feature:6782944-6783057:1:exon
so has part: feature:6786087-6786143:1:exon
so has part: feature:6787586-6787710:1:exon
so has part: feature:6789934-6789998:1:exon
so has part: feature:6792373-6792467:1:exon

XP_048219540.1
type: Protein
SIO_000068: ncbiprotein

position:6635438:1
position: 6635438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6792467:1
position: 6792467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6635438-6635613:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6732495-6732706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6738371-6738588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6748458-6748553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6755397-6755486:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6761614-6761698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6763585-6763727:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6767186-6767351:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6767453-6767544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6770280-6770357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6776195-6776357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6779792-6779874:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6782028-6782225:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6782944-6783057:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6786087-6786143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6787586-6787710:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6789934-6789998:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6792373-6792467:1:exon

Arhgap28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arhgap28
product: Rho GTPase activating protein 28, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048363587.1
SIO_010081: Arhgap28
subclass of: SO_0000673
so part of: Arhgap28
location: join(6635583..6635613,6683570..6683890,6732495..6732706,6738371..6738588,6748458..6748553,6755397..6755486,6761614..6761698,6763585..6763727,6767186..6767351,6767453..6767544,6770280..6770357,6776195..6776357,6779792..6779874,6782028..6782225,6782944..6783057,6786087..6786143,6787586..6787710,6789934..6789998,6792373..6794685)
location: region:6635583-6794685:1
so has part: feature:6635583-6635613:1:exon
so has part: feature:6683570-6683890:1:exon
so has part: feature:6732495-6732706:1:exon
so has part: feature:6738371-6738588:1:exon
so has part: feature:6748458-6748553:1:exon
so has part: feature:6755397-6755486:1:exon
so has part: feature:6761614-6761698:1:exon
so has part: feature:6763585-6763727:1:exon
so has part: feature:6767186-6767351:1:exon
so has part: feature:6767453-6767544:1:exon
so has part: feature:6770280-6770357:1:exon
so has part: feature:6776195-6776357:1:exon
so has part: feature:6779792-6779874:1:exon
so has part: feature:6782028-6782225:1:exon
so has part: feature:6782944-6783057:1:exon
so has part: feature:6786087-6786143:1:exon
so has part: feature:6787586-6787710:1:exon
so has part: feature:6789934-6789998:1:exon
so has part: feature:6792373-6794685:1:exon

position:6635583:1
position: 6635583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6635583-6635613:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6683570-6683890:1:exon

position:6683570:1
position: 6683570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6683890:1
position: 6683890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6732495-6732706:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6738371-6738588:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6748458-6748553:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6755397-6755486:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6761614-6761698:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6763585-6763727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6767186-6767351:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6767453-6767544:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6770280-6770357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6776195-6776357:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6779792-6779874:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6782028-6782225:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6782944-6783057:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6786087-6786143:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6787586-6787710:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6789934-6789998:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6792373-6794685:1:exon

Arhgap28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arhgap28
product: Rho GTPase activating protein 28, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048363588.1
SIO_010081: Arhgap28
subclass of: SO_0000673
so part of: Arhgap28
location: join(6672018..6672510,6732495..6732706,6738371..6738588,6748458..6748553,6755397..6755486,6761614..6761698,6763585..6763727,6767186..6767351,6767453..6767544,6770280..6770357,6776195..6776357,6779792..6779874,6782028..6782225,6782944..6783057,6786087..6786143,6787586..6787710,6789934..6789998,6792373..6794685)
location: region:6672018-6794685:1
so has part: feature:6672018-6672510:1:exon
so has part: feature:6732495-6732706:1:exon
so has part: feature:6738371-6738588:1:exon
so has part: feature:6748458-6748553:1:exon
so has part: feature:6755397-6755486:1:exon
so has part: feature:6761614-6761698:1:exon
so has part: feature:6763585-6763727:1:exon
so has part: feature:6767186-6767351:1:exon
so has part: feature:6767453-6767544:1:exon
so has part: feature:6770280-6770357:1:exon
so has part: feature:6776195-6776357:1:exon
so has part: feature:6779792-6779874:1:exon
so has part: feature:6782028-6782225:1:exon
so has part: feature:6782944-6783057:1:exon
so has part: feature:6786087-6786143:1:exon
so has part: feature:6787586-6787710:1:exon
so has part: feature:6789934-6789998:1:exon
so has part: feature:6792373-6794685:1:exon

position:6672018:1
position: 6672018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6672018-6672510:1:exon

position:6672510:1
position: 6672510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6732495-6732706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6738371-6738588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6748458-6748553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6755397-6755486:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6761614-6761698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6763585-6763727:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6767186-6767351:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6767453-6767544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6770280-6770357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6776195-6776357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6779792-6779874:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6782028-6782225:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6782944-6783057:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6786087-6786143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6787586-6787710:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6789934-6789998:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6792373-6794685:1:exon

Arhgap28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arhgap28
product: Rho GTPase activating protein 28, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048363586.1
SIO_010081: Arhgap28
subclass of: SO_0000673
so part of: Arhgap28
location: join(6683452..6683890,6732495..6732706,6738371..6738588,6748458..6748553,6755397..6755486,6761614..6761698,6763585..6763727,6767186..6767351,6767453..6767544,6770280..6770357,6776195..6776357,6779792..6779874,6782028..6782225,6782944..6783057,6786087..6786143,6787586..6787710,6789934..6789998,6792373..6794685)
location: region:6683452-6794685:1
so has part: feature:6683452-6683890:1:exon
so has part: feature:6732495-6732706:1:exon
so has part: feature:6738371-6738588:1:exon
so has part: feature:6748458-6748553:1:exon
so has part: feature:6755397-6755486:1:exon
so has part: feature:6761614-6761698:1:exon
so has part: feature:6763585-6763727:1:exon
so has part: feature:6767186-6767351:1:exon
so has part: feature:6767453-6767544:1:exon
so has part: feature:6770280-6770357:1:exon
so has part: feature:6776195-6776357:1:exon
so has part: feature:6779792-6779874:1:exon
so has part: feature:6782028-6782225:1:exon
so has part: feature:6782944-6783057:1:exon
so has part: feature:6786087-6786143:1:exon
so has part: feature:6787586-6787710:1:exon
so has part: feature:6789934-6789998:1:exon
so has part: feature:6792373-6794685:1:exon

position:6683452:1
position: 6683452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6683452-6683890:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6732495-6732706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6738371-6738588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6748458-6748553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6755397-6755486:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6761614-6761698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6763585-6763727:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6767186-6767351:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6767453-6767544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6770280-6770357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6776195-6776357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6779792-6779874:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6782028-6782225:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6782944-6783057:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6786087-6786143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6787586-6787710:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6789934-6789998:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6792373-6794685:1:exon

Arhgap28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arhgap28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 28 isoform X2
translation: MTAQEFCASALRISAPDFQLAERKSIPRCRRINRMLSNESLHSPAFSRSNSQASVDSGSMEDFWREIENLKEHSIMEGQEEPPSTPTETKPLDEGELEAEWLQDVGLSTLISGDEEEDGKALLSTLTRTQAAAVKKRYNTYTQTMRKKNKQTVRDVRDIFGVSESPPGDSCDNHATQLDGTEEEKELPEEVPKTRGSTPDGASLNSTAVSDGSPDEDGSLADPSSDSRSRLTAIPDIPVHSNGSSDPGQSVSNELHNGDYLEKNIPAEVEELSFEISYSEMITDAPKRNKYKKSEIKKEECALTKFFVQKTRFGLTEAGDLSAEDMKKIRHLSLIELTAFFDAFRIQLKRSKTEKVKGRDNGIFGVPLTVLLENDRKKDPGVKVPFVLQKFFEKVEESGLESEGIFRLSGCTAKVKQYREELDAKFNADKFKWDKMCHREAAVMLKAFFRELPTSLFPVEYIPAFITLLERGPHIKVQFQALHLMVMALPDANRDTAQALMKFFSKVIANESKNRMSVWNISTVMAPNLFFSRSKHSDCEELQLANTAAHIIRLMLKYQNILWKVPSFLITQVRRMNEATMLLKKQLPSMKKLLRRKTIEREVPTPKTSKVLQKSPSSRRMSDVPEGVIRVHAPLLSKVSMAIQLNSQTKAKDILAKFQYENSHSSSDCIKMQNQRLYEVGGNIGQHCLDPDAYILDVYHVNPHAEWVIKPQPRL
SIO_010081: Arhgap28
subclass of: SO_0000673
so part of: Arhgap28
location: join(6683823..6683890,6732495..6732706,6738371..6738588,6748458..6748553,6755397..6755486,6761614..6761698,6763585..6763727,6767186..6767351,6767453..6767544,6770280..6770357,6776195..6776357,6779792..6779874,6782028..6782225,6782944..6783057,6786087..6786143,6787586..6787710,6789934..6789998,6792373..6792467)
location: region:6683823-6792467:1
so has part: feature:6683823-6683890:1:exon
so has part: feature:6732495-6732706:1:exon
so has part: feature:6738371-6738588:1:exon
so has part: feature:6748458-6748553:1:exon
so has part: feature:6755397-6755486:1:exon
so has part: feature:6761614-6761698:1:exon
so has part: feature:6763585-6763727:1:exon
so has part: feature:6767186-6767351:1:exon
so has part: feature:6767453-6767544:1:exon
so has part: feature:6770280-6770357:1:exon
so has part: feature:6776195-6776357:1:exon
so has part: feature:6779792-6779874:1:exon
so has part: feature:6782028-6782225:1:exon
so has part: feature:6782944-6783057:1:exon
so has part: feature:6786087-6786143:1:exon
so has part: feature:6787586-6787710:1:exon
so has part: feature:6789934-6789998:1:exon
so has part: feature:6792373-6792467:1:exon

XP_048219543.1
type: Protein
SIO_000068: ncbiprotein

position:6683823:1
position: 6683823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6683823-6683890:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6732495-6732706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6738371-6738588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6748458-6748553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6755397-6755486:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6761614-6761698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6763585-6763727:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6767186-6767351:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6767453-6767544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6770280-6770357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6776195-6776357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6779792-6779874:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6782028-6782225:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6782944-6783057:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6786087-6786143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6787586-6787710:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6789934-6789998:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6792373-6792467:1:exon

Arhgap28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arhgap28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 28 isoform X2
translation: MTAQEFCASALRISAPDFQLAERKSIPRCRRINRMLSNESLHSPAFSRSNSQASVDSGSMEDFWREIENLKEHSIMEGQEEPPSTPTETKPLDEGELEAEWLQDVGLSTLISGDEEEDGKALLSTLTRTQAAAVKKRYNTYTQTMRKKNKQTVRDVRDIFGVSESPPGDSCDNHATQLDGTEEEKELPEEVPKTRGSTPDGASLNSTAVSDGSPDEDGSLADPSSDSRSRLTAIPDIPVHSNGSSDPGQSVSNELHNGDYLEKNIPAEVEELSFEISYSEMITDAPKRNKYKKSEIKKEECALTKFFVQKTRFGLTEAGDLSAEDMKKIRHLSLIELTAFFDAFRIQLKRSKTEKVKGRDNGIFGVPLTVLLENDRKKDPGVKVPFVLQKFFEKVEESGLESEGIFRLSGCTAKVKQYREELDAKFNADKFKWDKMCHREAAVMLKAFFRELPTSLFPVEYIPAFITLLERGPHIKVQFQALHLMVMALPDANRDTAQALMKFFSKVIANESKNRMSVWNISTVMAPNLFFSRSKHSDCEELQLANTAAHIIRLMLKYQNILWKVPSFLITQVRRMNEATMLLKKQLPSMKKLLRRKTIEREVPTPKTSKVLQKSPSSRRMSDVPEGVIRVHAPLLSKVSMAIQLNSQTKAKDILAKFQYENSHSSSDCIKMQNQRLYEVGGNIGQHCLDPDAYILDVYHVNPHAEWVIKPQPRL
SIO_010081: Arhgap28
subclass of: SO_0000673
so part of: Arhgap28
location: join(6683823..6683890,6732495..6732706,6738371..6738588,6748458..6748553,6755397..6755486,6761614..6761698,6763585..6763727,6767186..6767351,6767453..6767544,6770280..6770357,6776195..6776357,6779792..6779874,6782028..6782225,6782944..6783057,6786087..6786143,6787586..6787710,6789934..6789998,6792373..6792467)
location: region:6683823-6792467:1
so has part: feature:6683823-6683890:1:exon
so has part: feature:6732495-6732706:1:exon
so has part: feature:6738371-6738588:1:exon
so has part: feature:6748458-6748553:1:exon
so has part: feature:6755397-6755486:1:exon
so has part: feature:6761614-6761698:1:exon
so has part: feature:6763585-6763727:1:exon
so has part: feature:6767186-6767351:1:exon
so has part: feature:6767453-6767544:1:exon
so has part: feature:6770280-6770357:1:exon
so has part: feature:6776195-6776357:1:exon
so has part: feature:6779792-6779874:1:exon
so has part: feature:6782028-6782225:1:exon
so has part: feature:6782944-6783057:1:exon
so has part: feature:6786087-6786143:1:exon
so has part: feature:6787586-6787710:1:exon
so has part: feature:6789934-6789998:1:exon
so has part: feature:6792373-6792467:1:exon

XP_048219544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6683823-6683890:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6732495-6732706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6738371-6738588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6748458-6748553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6755397-6755486:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6761614-6761698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6763585-6763727:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6767186-6767351:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6767453-6767544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6770280-6770357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6776195-6776357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6779792-6779874:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6782028-6782225:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6782944-6783057:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6786087-6786143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6787586-6787710:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6789934-6789998:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6792373-6792467:1:exon

LOC125364352
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364352
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6704451..6704578
location: region:6704451-6704578:1
so has part: feature:6704451-6704578:1:exon
subclass of: SO_0000578

125364352
type: Gene
SIO_000068: ncbigene

position:6704451:1
position: 6704451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6704578:1
position: 6704578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6704451-6704578:1:exon

LOC125364352
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snoRNA
gene: LOC125364352
product: small nucleolar RNA SNORA40
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00561
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007213505.1
SIO_010081: LOC125364352
subclass of: SO_0000673
so part of: LOC125364352
location: 6704451..6704578
location: region:6704451-6704578:1
so has part: feature:6704451-6704578:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6704451-6704578:1:exon

Arhgap28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arhgap28
product: Rho GTPase activating protein 28, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048363590.1
SIO_010081: Arhgap28
subclass of: SO_0000673
so part of: Arhgap28
location: join(6710649..6710708,6732495..6732706,6738371..6738588,6748458..6748553,6755397..6755486,6761614..6761698,6763585..6763727,6767186..6767351,6767453..6767544,6770280..6770357,6776195..6776357,6779792..6779874,6782028..6782225,6782944..6783057,6786087..6786143,6787586..6787710,6789934..6789998,6792373..6794685)
location: region:6710649-6794685:1
so has part: feature:6710649-6710708:1:exon
so has part: feature:6732495-6732706:1:exon
so has part: feature:6738371-6738588:1:exon
so has part: feature:6748458-6748553:1:exon
so has part: feature:6755397-6755486:1:exon
so has part: feature:6761614-6761698:1:exon
so has part: feature:6763585-6763727:1:exon
so has part: feature:6767186-6767351:1:exon
so has part: feature:6767453-6767544:1:exon
so has part: feature:6770280-6770357:1:exon
so has part: feature:6776195-6776357:1:exon
so has part: feature:6779792-6779874:1:exon
so has part: feature:6782028-6782225:1:exon
so has part: feature:6782944-6783057:1:exon
so has part: feature:6786087-6786143:1:exon
so has part: feature:6787586-6787710:1:exon
so has part: feature:6789934-6789998:1:exon
so has part: feature:6792373-6794685:1:exon

position:6710649:1
position: 6710649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6710649-6710708:1:exon

position:6710708:1
position: 6710708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6732495-6732706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6738371-6738588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6748458-6748553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6755397-6755486:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6761614-6761698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6763585-6763727:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6767186-6767351:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6767453-6767544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6770280-6770357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6776195-6776357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6779792-6779874:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6782028-6782225:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6782944-6783057:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6786087-6786143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6787586-6787710:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6789934-6789998:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6792373-6794685:1:exon

Arhgap28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Arhgap28
product: Rho GTPase activating protein 28, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048363589.1
SIO_010081: Arhgap28
subclass of: SO_0000673
so part of: Arhgap28
location: join(6713727..6713883,6732495..6732706,6738371..6738588,6748458..6748553,6755397..6755486,6761614..6761698,6763585..6763727,6767186..6767351,6767453..6767544,6770280..6770357,6776195..6776357,6779792..6779874,6782028..6782225,6782944..6783057,6786087..6786143,6787586..6787710,6789934..6789998,6792373..6794685)
location: region:6713727-6794685:1
so has part: feature:6713727-6713883:1:exon
so has part: feature:6732495-6732706:1:exon
so has part: feature:6738371-6738588:1:exon
so has part: feature:6748458-6748553:1:exon
so has part: feature:6755397-6755486:1:exon
so has part: feature:6761614-6761698:1:exon
so has part: feature:6763585-6763727:1:exon
so has part: feature:6767186-6767351:1:exon
so has part: feature:6767453-6767544:1:exon
so has part: feature:6770280-6770357:1:exon
so has part: feature:6776195-6776357:1:exon
so has part: feature:6779792-6779874:1:exon
so has part: feature:6782028-6782225:1:exon
so has part: feature:6782944-6783057:1:exon
so has part: feature:6786087-6786143:1:exon
so has part: feature:6787586-6787710:1:exon
so has part: feature:6789934-6789998:1:exon
so has part: feature:6792373-6794685:1:exon

position:6713727:1
position: 6713727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6713727-6713883:1:exon

position:6713883:1
position: 6713883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6732495-6732706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6738371-6738588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6748458-6748553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6755397-6755486:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6761614-6761698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6763585-6763727:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6767186-6767351:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6767453-6767544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6770280-6770357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6776195-6776357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6779792-6779874:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6782028-6782225:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6782944-6783057:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6786087-6786143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6787586-6787710:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6789934-6789998:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6792373-6794685:1:exon

Arhgap28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arhgap28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 28 isoform X3
translation: MLSNESLHSPAFSRSNSQASVDSGSMEDFWREIENLKEHSIMEGQEEPPSTPTETKPLDEGELEAEWLQDVGLSTLISGDEEEDGKALLSTLTRTQAAAVKKRYNTYTQTMRKKNKQTVRDVRDIFGVSESPPGDSCDNHATQLDGTEEEKELPEEVPKTRGSTPDGASLNSTAVSDGSPDEDGSLADPSSDSRSRLTAIPDIPVHSNGSSDPGQSVSNELHNGDYLEKNIPAEVEELSFEISYSEMITDAPKRNKYKKSEIKKEECALTKFFVQKTRFGLTEAGDLSAEDMKKIRHLSLIELTAFFDAFRIQLKRSKTEKVKGRDNGIFGVPLTVLLENDRKKDPGVKVPFVLQKFFEKVEESGLESEGIFRLSGCTAKVKQYREELDAKFNADKFKWDKMCHREAAVMLKAFFRELPTSLFPVEYIPAFITLLERGPHIKVQFQALHLMVMALPDANRDTAQALMKFFSKVIANESKNRMSVWNISTVMAPNLFFSRSKHSDCEELQLANTAAHIIRLMLKYQNILWKVPSFLITQVRRMNEATMLLKKQLPSMKKLLRRKTIEREVPTPKTSKVLQKSPSSRRMSDVPEGVIRVHAPLLSKVSMAIQLNSQTKAKDILAKFQYENSHSSSDCIKMQNQRLYEVGGNIGQHCLDPDAYILDVYHVNPHAEWVIKPQPRL
SIO_010081: Arhgap28
subclass of: SO_0000673
so part of: Arhgap28
location: join(6732529..6732706,6738371..6738588,6748458..6748553,6755397..6755486,6761614..6761698,6763585..6763727,6767186..6767351,6767453..6767544,6770280..6770357,6776195..6776357,6779792..6779874,6782028..6782225,6782944..6783057,6786087..6786143,6787586..6787710,6789934..6789998,6792373..6792467)
location: region:6732529-6792467:1
so has part: feature:6732529-6732706:1:exon
so has part: feature:6738371-6738588:1:exon
so has part: feature:6748458-6748553:1:exon
so has part: feature:6755397-6755486:1:exon
so has part: feature:6761614-6761698:1:exon
so has part: feature:6763585-6763727:1:exon
so has part: feature:6767186-6767351:1:exon
so has part: feature:6767453-6767544:1:exon
so has part: feature:6770280-6770357:1:exon
so has part: feature:6776195-6776357:1:exon
so has part: feature:6779792-6779874:1:exon
so has part: feature:6782028-6782225:1:exon
so has part: feature:6782944-6783057:1:exon
so has part: feature:6786087-6786143:1:exon
so has part: feature:6787586-6787710:1:exon
so has part: feature:6789934-6789998:1:exon
so has part: feature:6792373-6792467:1:exon

XP_048219545.1
type: Protein
SIO_000068: ncbiprotein

position:6732529:1
position: 6732529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6732529-6732706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6738371-6738588:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6748458-6748553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6755397-6755486:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6761614-6761698:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6763585-6763727:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6767186-6767351:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6767453-6767544:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6770280-6770357:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6776195-6776357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6779792-6779874:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6782028-6782225:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6782944-6783057:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6786087-6786143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6787586-6787710:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6789934-6789998:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6792373-6792467:1:exon

Arhgap28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arhgap28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 28 isoform X3
translation: MLSNESLHSPAFSRSNSQASVDSGSMEDFWREIENLKEHSIMEGQEEPPSTPTETKPLDEGELEAEWLQDVGLSTLISGDEEEDGKALLSTLTRTQAAAVKKRYNTYTQTMRKKNKQTVRDVRDIFGVSESPPGDSCDNHATQLDGTEEEKELPEEVPKTRGSTPDGASLNSTAVSDGSPDEDGSLADPSSDSRSRLTAIPDIPVHSNGSSDPGQSVSNELHNGDYLEKNIPAEVEELSFEISYSEMITDAPKRNKYKKSEIKKEECALTKFFVQKTRFGLTEAGDLSAEDMKKIRHLSLIELTAFFDAFRIQLKRSKTEKVKGRDNGIFGVPLTVLLENDRKKDPGVKVPFVLQKFFEKVEESGLESEGIFRLSGCTAKVKQYREELDAKFNADKFKWDKMCHREAAVMLKAFFRELPTSLFPVEYIPAFITLLERGPHIKVQFQALHLMVMALPDANRDTAQALMKFFSKVIANESKNRMSVWNISTVMAPNLFFSRSKHSDCEELQLANTAAHIIRLMLKYQNILWKVPSFLITQVRRMNEATMLLKKQLPSMKKLLRRKTIEREVPTPKTSKVLQKSPSSRRMSDVPEGVIRVHAPLLSKVSMAIQLNSQTKAKDILAKFQYENSHSSSDCIKMQNQRLYEVGGNIGQHCLDPDAYILDVYHVNPHAEWVIKPQPRL
SIO_010081: Arhgap28
subclass of: SO_0000673
so part of: Arhgap28
location: join(6732529..6732706,6738371..6738588,6748458..6748553,6755397..6755486,6761614..6761698,6763585..6763727,6767186..6767351,6767453..6767544,6770280..6770357,6776195..6776357,6779792..6779874,6782028..6782225,6782944..6783057,6786087..6786143,6787586..6787710,6789934..6789998,6792373..6792467)
location: region:6732529-6792467:1
so has part: feature:6732529-6732706:1:exon
so has part: feature:6738371-6738588:1:exon
so has part: feature:6748458-6748553:1:exon
so has part: feature:6755397-6755486:1:exon
so has part: feature:6761614-6761698:1:exon
so has part: feature:6763585-6763727:1:exon
so has part: feature:6767186-6767351:1:exon
so has part: feature:6767453-6767544:1:exon
so has part: feature:6770280-6770357:1:exon
so has part: feature:6776195-6776357:1:exon
so has part: feature:6779792-6779874:1:exon
so has part: feature:6782028-6782225:1:exon
so has part: feature:6782944-6783057:1:exon
so has part: feature:6786087-6786143:1:exon
so has part: feature:6787586-6787710:1:exon
so has part: feature:6789934-6789998:1:exon
so has part: feature:6792373-6792467:1:exon

XP_048219546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6732529-6732706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6738371-6738588:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6748458-6748553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6755397-6755486:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6761614-6761698:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6763585-6763727:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6767186-6767351:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6767453-6767544:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6770280-6770357:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6776195-6776357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6779792-6779874:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6782028-6782225:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6782944-6783057:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6786087-6786143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6787586-6787710:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6789934-6789998:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6792373-6792467:1:exon

Arhgap28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Arhgap28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 28 isoform X3
translation: MLSNESLHSPAFSRSNSQASVDSGSMEDFWREIENLKEHSIMEGQEEPPSTPTETKPLDEGELEAEWLQDVGLSTLISGDEEEDGKALLSTLTRTQAAAVKKRYNTYTQTMRKKNKQTVRDVRDIFGVSESPPGDSCDNHATQLDGTEEEKELPEEVPKTRGSTPDGASLNSTAVSDGSPDEDGSLADPSSDSRSRLTAIPDIPVHSNGSSDPGQSVSNELHNGDYLEKNIPAEVEELSFEISYSEMITDAPKRNKYKKSEIKKEECALTKFFVQKTRFGLTEAGDLSAEDMKKIRHLSLIELTAFFDAFRIQLKRSKTEKVKGRDNGIFGVPLTVLLENDRKKDPGVKVPFVLQKFFEKVEESGLESEGIFRLSGCTAKVKQYREELDAKFNADKFKWDKMCHREAAVMLKAFFRELPTSLFPVEYIPAFITLLERGPHIKVQFQALHLMVMALPDANRDTAQALMKFFSKVIANESKNRMSVWNISTVMAPNLFFSRSKHSDCEELQLANTAAHIIRLMLKYQNILWKVPSFLITQVRRMNEATMLLKKQLPSMKKLLRRKTIEREVPTPKTSKVLQKSPSSRRMSDVPEGVIRVHAPLLSKVSMAIQLNSQTKAKDILAKFQYENSHSSSDCIKMQNQRLYEVGGNIGQHCLDPDAYILDVYHVNPHAEWVIKPQPRL
SIO_010081: Arhgap28
subclass of: SO_0000673
so part of: Arhgap28
location: join(6732529..6732706,6738371..6738588,6748458..6748553,6755397..6755486,6761614..6761698,6763585..6763727,6767186..6767351,6767453..6767544,6770280..6770357,6776195..6776357,6779792..6779874,6782028..6782225,6782944..6783057,6786087..6786143,6787586..6787710,6789934..6789998,6792373..6792467)
location: region:6732529-6792467:1
so has part: feature:6732529-6732706:1:exon
so has part: feature:6738371-6738588:1:exon
so has part: feature:6748458-6748553:1:exon
so has part: feature:6755397-6755486:1:exon
so has part: feature:6761614-6761698:1:exon
so has part: feature:6763585-6763727:1:exon
so has part: feature:6767186-6767351:1:exon
so has part: feature:6767453-6767544:1:exon
so has part: feature:6770280-6770357:1:exon
so has part: feature:6776195-6776357:1:exon
so has part: feature:6779792-6779874:1:exon
so has part: feature:6782028-6782225:1:exon
so has part: feature:6782944-6783057:1:exon
so has part: feature:6786087-6786143:1:exon
so has part: feature:6787586-6787710:1:exon
so has part: feature:6789934-6789998:1:exon
so has part: feature:6792373-6792467:1:exon

XP_048219547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6732529-6732706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6738371-6738588:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6748458-6748553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6755397-6755486:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6761614-6761698:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6763585-6763727:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6767186-6767351:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6767453-6767544:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6770280-6770357:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6776195-6776357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6779792-6779874:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6782028-6782225:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6782944-6783057:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6786087-6786143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6787586-6787710:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6789934-6789998:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6792373-6792467:1:exon

LOC125364135
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6800302..6803151)
location: region:6800302-6803151:-1
so has part: feature:6800302-6803151:-1:exon
subclass of: SO_0000011

125364135
type: Gene
SIO_000068: ncbigene

position:6800302:-1
position: 6800302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6803151:-1
position: 6803151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6800302-6803151:-1:exon

LOC125364135
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: lncRNA
gene: LOC125364135
product: uncharacterized LOC125364135
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007213418.1
SIO_010081: LOC125364135
subclass of: SO_0000673
so part of: LOC125364135
location: complement(join(6800302..6800764,6801167..6801349,6803092..6803151))
location: region:6800302-6803151:-1
so has part: feature:6803092-6803151:-1:exon
so has part: feature:6801167-6801349:-1:exon
so has part: feature:6800302-6800764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6803092-6803151:-1:exon

position:6803092:-1
position: 6803092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6801167-6801349:-1:exon

position:6801167:-1
position: 6801167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6801349:-1
position: 6801349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6800302-6800764:-1:exon

position:6800764:-1
position: 6800764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Lama1
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Lama1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6807853..6955859)
location: region:6807853-6955859:-1
so has part: feature:6807853-6955859:-1:exon
subclass of: SO_0000010

125364133
type: Gene
SIO_000068: ncbigene

position:6807853:-1
position: 6807853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6955859:-1
position: 6955859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6807853-6955859:-1:exon

Lama1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Lama1
product: laminin subunit alpha 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048363582.1
SIO_010081: Lama1
subclass of: SO_0000673
so part of: Lama1
location: complement(join(6807853..6808197,6809015..6809237,6812557..6812690,6813409..6813562,6814281..6814439,6815162..6815351,6815548..6815660,6817550..6817685,6819276..6819461,6820078..6820229,6821904..6822074,6822258..6822372,6824005..6824146,6826128..6826272,6827386..6827536,6830316..6830440,6831211..6831361,6832185..6832315,6833494..6833637,6834722..6834876,6835164..6835346,6836287..6836403,6837749..6837842,6839665..6839800,6841792..6841955,6842066..6842182,6843402..6843612,6844681..6844843,6846130..6846241,6847286..6847375,6849382..6849524,6850725..6850918,6851158..6851244,6852277..6852398,6854614..6854751,6856204..6856324,6857471..6857598,6858839..6859024,6860569..6860748,6861181..6861324,6862195..6862431,6863570..6863706,6864343..6864523,6864778..6864884,6866369..6866580,6867295..6867381,6871559..6871686,6875530..6875640,6879739..6879850,6880808..6881019,6882028..6882129,6883025..6883198,6884720..6884860,6886835..6886995,6889541..6889646,6890390..6890568,6892109..6892226,6893248..6893337,6895498..6895677,6897349..6897591,6923111..6923223,6924066..6924236,6955705..6955859))
location: region:6807853-6955859:-1
so has part: feature:6955705-6955859:-1:exon
so has part: feature:6924066-6924236:-1:exon
so has part: feature:6923111-6923223:-1:exon
so has part: feature:6897349-6897591:-1:exon
so has part: feature:6895498-6895677:-1:exon
so has part: feature:6893248-6893337:-1:exon
so has part: feature:6892109-6892226:-1:exon
so has part: feature:6890390-6890568:-1:exon
so has part: feature:6889541-6889646:-1:exon
so has part: feature:6886835-6886995:-1:exon
so has part: feature:6884720-6884860:-1:exon
so has part: feature:6883025-6883198:-1:exon
so has part: feature:6882028-6882129:-1:exon
so has part: feature:6880808-6881019:-1:exon
so has part: feature:6879739-6879850:-1:exon
so has part: feature:6875530-6875640:-1:exon
so has part: feature:6871559-6871686:-1:exon
so has part: feature:6867295-6867381:-1:exon
so has part: feature:6866369-6866580:-1:exon
so has part: feature:6864778-6864884:-1:exon
so has part: feature:6864343-6864523:-1:exon
so has part: feature:6863570-6863706:-1:exon
so has part: feature:6862195-6862431:-1:exon
so has part: feature:6861181-6861324:-1:exon
so has part: feature:6860569-6860748:-1:exon
so has part: feature:6858839-6859024:-1:exon
so has part: feature:6857471-6857598:-1:exon
so has part: feature:6856204-6856324:-1:exon
so has part: feature:6854614-6854751:-1:exon
so has part: feature:6852277-6852398:-1:exon
so has part: feature:6851158-6851244:-1:exon
so has part: feature:6850725-6850918:-1:exon
so has part: feature:6849382-6849524:-1:exon
so has part: feature:6847286-6847375:-1:exon
so has part: feature:6846130-6846241:-1:exon
so has part: feature:6844681-6844843:-1:exon
so has part: feature:6843402-6843612:-1:exon
so has part: feature:6842066-6842182:-1:exon
so has part: feature:6841792-6841955:-1:exon
so has part: feature:6839665-6839800:-1:exon
so has part: feature:6837749-6837842:-1:exon
so has part: feature:6836287-6836403:-1:exon
so has part: feature:6835164-6835346:-1:exon
so has part: feature:6834722-6834876:-1:exon
so has part: feature:6833494-6833637:-1:exon
so has part: feature:6832185-6832315:-1:exon
so has part: feature:6831211-6831361:-1:exon
so has part: feature:6830316-6830440:-1:exon
so has part: feature:6827386-6827536:-1:exon
so has part: feature:6826128-6826272:-1:exon
so has part: feature:6824005-6824146:-1:exon
so has part: feature:6822258-6822372:-1:exon
so has part: feature:6821904-6822074:-1:exon
so has part: feature:6820078-6820229:-1:exon
so has part: feature:6819276-6819461:-1:exon
so has part: feature:6817550-6817685:-1:exon
so has part: feature:6815548-6815660:-1:exon
so has part: feature:6815162-6815351:-1:exon
so has part: feature:6814281-6814439:-1:exon
so has part: feature:6813409-6813562:-1:exon
so has part: feature:6812557-6812690:-1:exon
so has part: feature:6809015-6809237:-1:exon
so has part: feature:6807853-6808197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6955705-6955859:-1:exon

position:6955705:-1
position: 6955705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6924066-6924236:-1:exon

position:6924066:-1
position: 6924066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6924236:-1
position: 6924236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6923111-6923223:-1:exon

position:6923111:-1
position: 6923111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6923223:-1
position: 6923223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6897349-6897591:-1:exon

position:6897349:-1
position: 6897349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6897591:-1
position: 6897591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6895498-6895677:-1:exon

position:6895498:-1
position: 6895498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6895677:-1
position: 6895677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6893248-6893337:-1:exon

position:6893248:-1
position: 6893248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6893337:-1
position: 6893337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6892109-6892226:-1:exon

position:6892109:-1
position: 6892109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6892226:-1
position: 6892226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6890390-6890568:-1:exon

position:6890390:-1
position: 6890390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6890568:-1
position: 6890568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6889541-6889646:-1:exon

position:6889541:-1
position: 6889541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6889646:-1
position: 6889646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6886835-6886995:-1:exon

position:6886835:-1
position: 6886835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6886995:-1
position: 6886995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6884720-6884860:-1:exon

position:6884720:-1
position: 6884720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6884860:-1
position: 6884860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6883025-6883198:-1:exon

position:6883025:-1
position: 6883025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6883198:-1
position: 6883198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6882028-6882129:-1:exon

position:6882028:-1
position: 6882028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6882129:-1
position: 6882129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6880808-6881019:-1:exon

position:6880808:-1
position: 6880808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6881019:-1
position: 6881019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6879739-6879850:-1:exon

position:6879739:-1
position: 6879739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6879850:-1
position: 6879850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6875530-6875640:-1:exon

position:6875530:-1
position: 6875530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6875640:-1
position: 6875640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6871559-6871686:-1:exon

position:6871559:-1
position: 6871559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6871686:-1
position: 6871686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6867295-6867381:-1:exon

position:6867295:-1
position: 6867295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6867381:-1
position: 6867381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6866369-6866580:-1:exon

position:6866369:-1
position: 6866369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6866580:-1
position: 6866580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6864778-6864884:-1:exon

position:6864778:-1
position: 6864778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6864884:-1
position: 6864884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6864343-6864523:-1:exon

position:6864343:-1
position: 6864343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6864523:-1
position: 6864523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6863570-6863706:-1:exon

position:6863570:-1
position: 6863570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6863706:-1
position: 6863706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6862195-6862431:-1:exon

position:6862195:-1
position: 6862195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6862431:-1
position: 6862431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6861181-6861324:-1:exon

position:6861181:-1
position: 6861181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6861324:-1
position: 6861324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6860569-6860748:-1:exon

position:6860569:-1
position: 6860569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6860748:-1
position: 6860748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:6858839-6859024:-1:exon

position:6858839:-1
position: 6858839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6859024:-1
position: 6859024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:6857471-6857598:-1:exon

position:6857471:-1
position: 6857471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6857598:-1
position: 6857598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:6856204-6856324:-1:exon

position:6856204:-1
position: 6856204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6856324:-1
position: 6856324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:6854614-6854751:-1:exon

position:6854614:-1
position: 6854614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6854751:-1
position: 6854751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:6852277-6852398:-1:exon

position:6852277:-1
position: 6852277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6852398:-1
position: 6852398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:6851158-6851244:-1:exon

position:6851158:-1
position: 6851158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6851244:-1
position: 6851244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:6850725-6850918:-1:exon

position:6850725:-1
position: 6850725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6850918:-1
position: 6850918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:6849382-6849524:-1:exon

position:6849382:-1
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urn:…
SIO_000300: 34
SIO_000628: feature:6847286-6847375:-1:exon

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position:6847375:-1
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reference: sequence
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urn:…
SIO_000300: 35
SIO_000628: feature:6846130-6846241:-1:exon

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urn:…
SIO_000300: 36
SIO_000628: feature:6844681-6844843:-1:exon

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reference: sequence
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urn:…
SIO_000300: 37
SIO_000628: feature:6843402-6843612:-1:exon

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reference: sequence
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position:6843612:-1
position: 6843612
reference: sequence
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urn:…
SIO_000300: 38
SIO_000628: feature:6842066-6842182:-1:exon

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reference: sequence
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urn:…
SIO_000300: 39
SIO_000628: feature:6841792-6841955:-1:exon

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reference: sequence
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position:6841955:-1
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urn:…
SIO_000300: 40
SIO_000628: feature:6839665-6839800:-1:exon

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urn:…
SIO_000300: 41
SIO_000628: feature:6837749-6837842:-1:exon

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position: 6837749
reference: sequence
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urn:…
SIO_000300: 42
SIO_000628: feature:6836287-6836403:-1:exon

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position: 6836287
reference: sequence
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position:6836403:-1
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urn:…
SIO_000300: 43
SIO_000628: feature:6835164-6835346:-1:exon

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reference: sequence
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urn:…
SIO_000300: 44
SIO_000628: feature:6834722-6834876:-1:exon

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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 45
SIO_000628: feature:6833494-6833637:-1:exon

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urn:…
SIO_000300: 46
SIO_000628: feature:6832185-6832315:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 47
SIO_000628: feature:6831211-6831361:-1:exon

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urn:…
SIO_000300: 48
SIO_000628: feature:6830316-6830440:-1:exon

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reference: sequence
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urn:…
SIO_000300: 49
SIO_000628: feature:6827386-6827536:-1:exon

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position: 6827386
reference: sequence
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position:6827536:-1
position: 6827536
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 50
SIO_000628: feature:6826128-6826272:-1:exon

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urn:…
SIO_000300: 51
SIO_000628: feature:6824005-6824146:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:6824146:-1
position: 6824146
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 52
SIO_000628: feature:6822258-6822372:-1:exon

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reference: sequence
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position: 6822372
reference: sequence
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urn:…
SIO_000300: 53
SIO_000628: feature:6821904-6822074:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 54
SIO_000628: feature:6820078-6820229:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 55
SIO_000628: feature:6819276-6819461:-1:exon

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urn:…
SIO_000300: 56
SIO_000628: feature:6817550-6817685:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:6817685:-1
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urn:…
SIO_000300: 57
SIO_000628: feature:6815548-6815660:-1:exon

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position: 6815548
reference: sequence
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urn:…
SIO_000300: 58
SIO_000628: feature:6815162-6815351:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 59
SIO_000628: feature:6814281-6814439:-1:exon

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reference: sequence
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position: 6814439
reference: sequence
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urn:…
SIO_000300: 60
SIO_000628: feature:6813409-6813562:-1:exon

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urn:…
SIO_000300: 61
SIO_000628: feature:6812557-6812690:-1:exon

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reference: sequence
type: ReverseStrandPosition
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 62
SIO_000628: feature:6809015-6809237:-1:exon

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urn:…
SIO_000300: 63
SIO_000628: feature:6807853-6808197:-1:exon

position:6808197:-1
position: 6808197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Lama1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Lama1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: laminin subunit alpha-1
translation: MHGGARLALLASLLWVSVQGSPRGLFPAILNLASNAHISANATCGERGPEMYCKLVEHVPGRPVRNAQCRLCDSNSTNPRESHPISHAIDGTNNWWQSPSIQNGREYHWVTITLDLQQVFQVAYVIIKAANAPRPGNWILERSVDGITFSPWQYYAVSDSECLTRYNIIPRRGPPTYRADDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDLSPRLLEFTSARYIRLRLQRIRTLNADLMTLSHRDPRDLDPIVTRRYYYSIKDISVGGMCICYGHASSCPWDATAKQLRCQCEHNTCGEHCDRCCPGYHQQPWRPGTISSGNTCEECNCHNKTNDCYYDENVAKQRKSLNTAGKFEGGGVCIDCQQNTTGVNCETCIDGYYRPHKVSPYEDEPCQPCDCDPVGSVSPICIKDDLHSDLQSGKWPGQCPCKEGYAGERCDRCQFGYRGFPSCVRCECSLAGSVNPDPCTEPCLCKENVEGENCDRCKPGFYNLKEGDPQGCTECFCFGVSDVCNSLSWPFGQVSNMSGWLITDLISPHKIQCQQDRLGGHWQISINNTAVLNRLGPKYYWSAPEAYLGNKLTAYGGFLRYTVSYDIPVDTVDSGLTSHIDVIIKGNGLTLSTQGEGLSLQPYEEYFNVIRLVPENFRDFHNRKEIDRDQLMTVLANVTHLLIRANYNSAKMALYRLNSVSLDTASRNAIDLAVATDVEHCECPQGYTGTSCETCLPSYYRVDGILFGGICQPCECHGHASECDIHGVCLACAHHTTGNHCEQCLPGFYGVPSRGTPEDCQPCACPLYTASNNFSPTCHLTDEDEVLCDQCAPGYSGVWCERCADGYYGNPTVPGETCVPCDCNGNVDPSEAGHCDSVTGECLKCVGNTNGTHCERCADGFYGDAVTAKNCRACDCHENGSLSGVCNIDTGLCDCKAHVTGQQCDQCLPGYYGLNLGLGCQPCNCSETGSMSDDCTDEGQCHCLPGVAGKKCDRCSRGFFGYQDGRCTPCNCAHTQNNCDPVSGECLCPPHTRGPTCQECEDGYWGQDLKMGCQACNCSHEGSTSSQCDMRSGQCHCKAKFSGQNCGQCSLGYRDFPACVSCDCNLRGTRADTCDPEHGLCSCAEETGACTCKDNVVGLQCSVCGSGTFGLSADDPLGCTPCFCFGLSQLCSELEGYVRTPVTLASDQPILRVVSKTDLWGTTTGVHFQSPDILLDAETVRQHLRSEPFYWRLPNQFQGDQLLAYGGKLLYSVAFYSSTGTGPSNYEPQVIIRGGQTRKLHIHVDEPAPKNGVREDRAVAMHENSWKYFDTVFEKTVTRSDFMSVLSNIEYILIKASYGQGLQQSRISNISLEVGRKAGELWPMGEAASRLESCVCPPGTTGFSCQDCAPGYYRGKLPDVHGTGPPPLLAPCVPCSCNNNSDSCDPETGKCLNCRGNTTGDHCDVCAPGYYGKVTGSARDCSPCACPHHPPASFSPTCVLEGAGGFRCDACAPGHEGQFCERCSTGYYGNPQAPGGRCQKCDCNSNGSVHSNCDRSSGQCVCKPGHAGLRCEECQPRHLLVESHCVSCDDECVGALLNDLDNISHAILSVNLTGMFPAPYGNLSDLENKTQYFQGYFLKKNTQMNWTVVQLDGIAEETDNLQKELTRVLTDSQQVNKATERIFNQSQNLATFIELLLKNGKEILEKAATLNQTTDEDLQLHSATLQNLKQSILSLLEGIRKRNFTQVHENVTHELRAAKDLLSEIQKTFQKPQKELEVFLEATRHHLAEHSSELQALDELLREAETKTQDSNRLLHVVEANLGTFRNETLRVQEEQNVTSKLVVEGSRLVDAATTQADAVQNLVEELGNHWDEVLLWTAKLRQHVDNLVMQMSKRGAIPLVHRAEDHAAELQRLAGALDSGLENVRDVSLNATRAAYVYSNIQKLLQQAEQLANDAQSTGDKTSQVAESLASRSKVYLQRSSRFLQQSSNLSGKQQGVTLWLSKLKNMTNRFQENADKIARQTNASLLI…
SIO_010081: Lama1
subclass of: SO_0000673
so part of: Lama1
location: complement(join(6808037..6808197,6809015..6809237,6812557..6812690,6813409..6813562,6814281..6814439,6815162..6815351,6815548..6815660,6817550..6817685,6819276..6819461,6820078..6820229,6821904..6822074,6822258..6822372,6824005..6824146,6826128..6826272,6827386..6827536,6830316..6830440,6831211..6831361,6832185..6832315,6833494..6833637,6834722..6834876,6835164..6835346,6836287..6836403,6837749..6837842,6839665..6839800,6841792..6841955,6842066..6842182,6843402..6843612,6844681..6844843,6846130..6846241,6847286..6847375,6849382..6849524,6850725..6850918,6851158..6851244,6852277..6852398,6854614..6854751,6856204..6856324,6857471..6857598,6858839..6859024,6860569..6860748,6861181..6861324,6862195..6862431,6863570..6863706,6864343..6864523,6864778..6864884,6866369..6866580,6867295..6867381,6871559..6871686,6875530..6875640,6879739..6879850,6880808..6881019,6882028..6882129,6883025..6883198,6884720..6884860,6886835..6886995,6889541..6889646,6890390..6890568,6892109..6892226,6893248..6893337,6895498..6895677,6897349..6897591,6923111..6923223,6924066..6924236,6955705..6955774))
location: region:6808037-6955774:-1
so has part: feature:6955705-6955774:-1:exon
so has part: feature:6924066-6924236:-1:exon
so has part: feature:6923111-6923223:-1:exon
so has part: feature:6897349-6897591:-1:exon
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so has part: feature:6893248-6893337:-1:exon
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so has part: feature:6890390-6890568:-1:exon
so has part: feature:6889541-6889646:-1:exon
so has part: feature:6886835-6886995:-1:exon
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so has part: feature:6883025-6883198:-1:exon
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so has part: feature:6880808-6881019:-1:exon
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so has part: feature:6864778-6864884:-1:exon
so has part: feature:6864343-6864523:-1:exon
so has part: feature:6863570-6863706:-1:exon
so has part: feature:6862195-6862431:-1:exon
so has part: feature:6861181-6861324:-1:exon
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so has part: feature:6849382-6849524:-1:exon
so has part: feature:6847286-6847375:-1:exon
so has part: feature:6846130-6846241:-1:exon
so has part: feature:6844681-6844843:-1:exon
so has part: feature:6843402-6843612:-1:exon
so has part: feature:6842066-6842182:-1:exon
so has part: feature:6841792-6841955:-1:exon
so has part: feature:6839665-6839800:-1:exon
so has part: feature:6837749-6837842:-1:exon
so has part: feature:6836287-6836403:-1:exon
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so has part: feature:6833494-6833637:-1:exon
so has part: feature:6832185-6832315:-1:exon
so has part: feature:6831211-6831361:-1:exon
so has part: feature:6830316-6830440:-1:exon
so has part: feature:6827386-6827536:-1:exon
so has part: feature:6826128-6826272:-1:exon
so has part: feature:6824005-6824146:-1:exon
so has part: feature:6822258-6822372:-1:exon
so has part: feature:6821904-6822074:-1:exon
so has part: feature:6820078-6820229:-1:exon
so has part: feature:6819276-6819461:-1:exon
so has part: feature:6817550-6817685:-1:exon
so has part: feature:6815548-6815660:-1:exon
so has part: feature:6815162-6815351:-1:exon
so has part: feature:6814281-6814439:-1:exon
so has part: feature:6813409-6813562:-1:exon
so has part: feature:6812557-6812690:-1:exon
so has part: feature:6809015-6809237:-1:exon
so has part: feature:6808037-6808197:-1:exon

XP_048219539.1
type: Protein
SIO_000068: ncbiprotein

position:6808037:-1
position: 6808037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6955774:-1
position: 6955774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6955705-6955774:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6924066-6924236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6923111-6923223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6897349-6897591:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6895498-6895677:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6893248-6893337:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6892109-6892226:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6890390-6890568:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6889541-6889646:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6886835-6886995:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6884720-6884860:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6883025-6883198:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6882028-6882129:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6880808-6881019:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6879739-6879850:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6875530-6875640:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6871559-6871686:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6867295-6867381:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6866369-6866580:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6864778-6864884:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6864343-6864523:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6863570-6863706:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6862195-6862431:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6861181-6861324:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6860569-6860748:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6858839-6859024:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6857471-6857598:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6856204-6856324:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6854614-6854751:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6852277-6852398:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6851158-6851244:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6850725-6850918:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6849382-6849524:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:6847286-6847375:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:6846130-6846241:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:6844681-6844843:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:6843402-6843612:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:6842066-6842182:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:6841792-6841955:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:6839665-6839800:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:6837749-6837842:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:6836287-6836403:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:6835164-6835346:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:6834722-6834876:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:6833494-6833637:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:6832185-6832315:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:6831211-6831361:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:6830316-6830440:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:6827386-6827536:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:6826128-6826272:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:6824005-6824146:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:6822258-6822372:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:6821904-6822074:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:6820078-6820229:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:6819276-6819461:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:6817550-6817685:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:6815548-6815660:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:6815162-6815351:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:6814281-6814439:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:6813409-6813562:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:6812557-6812690:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:6809015-6809237:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:6808037-6808197:-1:exon

LOC125364323
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: LOC125364323
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6921396..6921500)
location: region:6921396-6921500:-1
so has part: feature:6921396-6921500:-1:exon
subclass of: SO_0000623

125364323
type: Gene
SIO_000068: ncbigene

position:6921396:-1
position: 6921396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6921500:-1
position: 6921500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6921396-6921500:-1:exon

LOC125364323
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 214514
nc RNA class: snRNA
gene: LOC125364323
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007213483.1
SIO_010081: LOC125364323
subclass of: SO_0000673
so part of: LOC125364323
location: complement(6921396..6921500)
location: region:6921396-6921500:-1
so has part: feature:6921396-6921500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6921396-6921500:-1:exon

Lrrc30
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Lrrc30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7010405..7014085
location: region:7010405-7014085:1
so has part: feature:7010405-7014085:1:exon
subclass of: SO_0000010

125364092
type: Gene
SIO_000068: ncbigene

position:7010405:1
position: 7010405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7014085:1
position: 7014085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7010405-7014085:1:exon

Lrrc30
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Lrrc30
product: leucine rich repeat containing 30
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048363522.1
SIO_010081: Lrrc30
subclass of: SO_0000673
so part of: Lrrc30
location: 7010405..7014085
location: region:7010405-7014085:1
so has part: feature:7010405-7014085:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7010405-7014085:1:exon

Lrrc30
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214514
gene: Lrrc30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 30
translation: MGARQSRANSKDKDPKQMTILGRRQKFPAWDDTLLLGKDPRSLLKRGMRHVSFSLVTKGMTDIPDFLWGLSEVQKLNLSHNQLHILPPEVGKLTRIVVLNLCGNRLKSLPREISLLQNLKVLFVNMNCLSEVPPELSLCRNLEVLSLSHNCLSQLPASFTDLSRLRKLNLSNNYFIHIPICVFSLKELDFLHVGSNRLENIAESIQCLSSLQIFIAENNNIHSFPRSLCLVTSLELLNLNHNDIQSLPDELYLLSRLGRIAWNPMDKGLHISHNPLSKPLPELVEGGLEMLFSYLKDKKHN
SIO_010081: Lrrc30
subclass of: SO_0000673
so part of: Lrrc30
location: 7012287..7013192
location: region:7012287-7013192:1
so has part: feature:7012287-7013192:1:exon

XP_048219479.1
type: Protein
SIO_000068: ncbiprotein

position:7012287:1
position: 7012287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7013192:1
position: 7013192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7012287-7013192:1:exon

Ptprm
type: Gene
subclass of: SO_0000704
RO_0002162: 214514
gene: Ptprm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7255321..8022668
location: region:7255321-8022668:1
so has part: feature:7255321-8022668:1:exon
subclass of: SO_0000010

125363862
type: Gene
SIO_000068: ncbigene

position:7255321:1
position: 7255321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8022668:1
position: 8022668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7255321-8022668:1:exon

Ptprm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ptprm
product: protein tyrosine phosphatase receptor type M, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048363182.1
SIO_010081: Ptprm
subclass of: SO_0000673
so part of: Ptprm
location: join(7255321..7255826,7432563..7432685,7528777..7529048,7544858..7544936,7564535..7564650,7588397..7588571,7594260..7594553,7695089..7695397,7703240..7703349,7712234..7712435,7717068..7717170,7742206..7742479,7743437..7743473,7750718..7750792,7778643..7778775,7861942..7862093,7866313..7866387,7866613..7866639,7870869..7870880,7871568..7871755,7916670..7916757,7928196..7928272,7932605..7932641,7959819..7959916,7986600..7986716,7987434..7987484,7991271..7991425,7991632..7991767,7993512..7993661,7994603..7994776,7995650..7995781,8001980..8002105,8004676..8004839,8013063..8013198,8021724..8022668)
location: region:7255321-8022668:1
so has part: feature:7255321-7255826:1:exon
so has part: feature:7432563-7432685:1:exon
so has part: feature:7528777-7529048:1:exon
so has part: feature:7544858-7544936:1:exon
so has part: feature:7564535-7564650:1:exon
so has part: feature:7588397-7588571:1:exon
so has part: feature:7594260-7594553:1:exon
so has part: feature:7695089-7695397:1:exon
so has part: feature:7703240-7703349:1:exon
so has part: feature:7712234-7712435:1:exon
so has part: feature:7717068-7717170:1:exon
so has part: feature:7742206-7742479:1:exon
so has part: feature:7743437-7743473:1:exon
so has part: feature:7750718-7750792:1:exon
so has part: feature:7778643-7778775:1:exon
so has part: feature:7861942-7862093:1:exon
so has part: feature:7866313-7866387:1:exon
so has part: feature:7866613-7866639:1:exon
so has part: feature:7870869-7870880:1:exon
so has part: feature:7871568-7871755:1:exon
so has part: feature:7916670-7916757:1:exon
so has part: feature:7928196-7928272:1:exon
so has part: feature:7932605-7932641:1:exon
so has part: feature:7959819-7959916:1:exon
so has part: feature:7986600-7986716:1:exon
so has part: feature:7987434-7987484:1:exon
so has part: feature:7991271-7991425:1:exon
so has part: feature:7991632-7991767:1:exon
so has part: feature:7993512-7993661:1:exon
so has part: feature:7994603-7994776:1:exon
so has part: feature:7995650-7995781:1:exon
so has part: feature:8001980-8002105:1:exon
so has part: feature:8004676-8004839:1:exon
so has part: feature:8013063-8013198:1:exon
so has part: feature:8021724-8022668:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7255321-7255826:1:exon

position:7255826:1
position: 7255826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7432563-7432685:1:exon

position:7432563:1
position: 7432563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7432685:1
position: 7432685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7528777-7529048:1:exon

position:7528777:1
position: 7528777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7529048:1
position: 7529048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7544858-7544936:1:exon

position:7544858:1
position: 7544858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7544936:1
position: 7544936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7564535-7564650:1:exon

position:7564535:1
position: 7564535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7564650:1
position: 7564650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7588397-7588571:1:exon

position:7588397:1
position: 7588397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7588571:1
position: 7588571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7594260-7594553:1:exon

position:7594260:1
position: 7594260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7594553:1
position: 7594553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7695089-7695397:1:exon

position:7695089:1
position: 7695089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7695397:1
position: 7695397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7703240-7703349:1:exon

position:7703240:1
position: 7703240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7703349:1
position: 7703349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7712234-7712435:1:exon

position:7712234:1
position: 7712234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7712435:1
position: 7712435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7717068-7717170:1:exon

position:7717068:1
position: 7717068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7717170:1
position: 7717170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7742206-7742479:1:exon

position:7742206:1
position: 7742206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7742479:1
position: 7742479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7743437-7743473:1:exon

position:7743437:1
position: 7743437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7743473:1
position: 7743473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7750718-7750792:1:exon

position:7750718:1
position: 7750718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7750792:1
position: 7750792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7778643-7778775:1:exon

position:7778643:1
position: 7778643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7778775:1
position: 7778775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7861942-7862093:1:exon

position:7861942:1
position: 7861942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7862093:1
position: 7862093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7866313-7866387:1:exon

position:7866313:1
position: 7866313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7866387:1
position: 7866387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7866613-7866639:1:exon

position:7866613:1
position: 7866613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7866639:1
position: 7866639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7870869-7870880:1:exon

position:7870869:1
position: 7870869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7870880:1
position: 7870880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7871568-7871755:1:exon

position:7871568:1
position: 7871568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7871755:1
position: 7871755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7916670-7916757:1:exon

position:7916670:1
position: 7916670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7916757:1
position: 7916757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7928196-7928272:1:exon

position:7928196:1
position: 7928196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7928272:1
position: 7928272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7932605-7932641:1:exon

position:7932605:1
position: 7932605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7932641:1
position: 7932641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7959819-7959916:1:exon

position:7959819:1
position: 7959819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7959916:1
position: 7959916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7986600-7986716:1:exon

position:7986600:1
position: 7986600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7986716:1
position: 7986716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7987434-7987484:1:exon

position:7987434:1
position: 7987434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7987484:1
position: 7987484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7991271-7991425:1:exon

position:7991271:1
position: 7991271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7991425:1
position: 7991425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7991632-7991767:1:exon

position:7991632:1
position: 7991632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7991767:1
position: 7991767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:7993512-7993661:1:exon

position:7993512:1
position: 7993512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7993661:1
position: 7993661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:7994603-7994776:1:exon

position:7994603:1
position: 7994603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7994776:1
position: 7994776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:7995650-7995781:1:exon

position:7995650:1
position: 7995650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7995781:1
position: 7995781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:8001980-8002105:1:exon

position:8001980:1
position: 8001980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8002105:1
position: 8002105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:8004676-8004839:1:exon

position:8004676:1
position: 8004676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8004839:1
position: 8004839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:8013063-8013198:1:exon

position:8013063:1
position: 8013063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8013198:1
position: 8013198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:8021724-8022668:1:exon

position:8021724:1
position: 8021724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ptprm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ptprm
product: protein tyrosine phosphatase receptor type M, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048363174.1
SIO_010081: Ptprm
subclass of: SO_0000673
so part of: Ptprm
location: join(7255322..7255826,7432563..7432685,7528777..7529048,7544858..7544936,7564535..7564650,7588397..7588571,7594260..7594553,7695089..7695397,7703240..7703349,7712234..7712435,7717068..7717170,7742206..7742479,7743437..7743473,7778643..7778775,7861942..7862093,7866313..7866387,7866613..7866639,7871568..7871755,7916670..7916757,7928196..7928272,7932605..7932641,7959819..7959916,7986600..7986716,7987434..7987484,7991271..7991425,7991632..7991767,7993512..7993661,7994603..7994776,7995650..7995781,8001980..8002105,8004676..8004839,8013063..8013198,8021724..8022665)
location: region:7255322-8022665:1
so has part: feature:7255322-7255826:1:exon
so has part: feature:7432563-7432685:1:exon
so has part: feature:7528777-7529048:1:exon
so has part: feature:7544858-7544936:1:exon
so has part: feature:7564535-7564650:1:exon
so has part: feature:7588397-7588571:1:exon
so has part: feature:7594260-7594553:1:exon
so has part: feature:7695089-7695397:1:exon
so has part: feature:7703240-7703349:1:exon
so has part: feature:7712234-7712435:1:exon
so has part: feature:7717068-7717170:1:exon
so has part: feature:7742206-7742479:1:exon
so has part: feature:7743437-7743473:1:exon
so has part: feature:7778643-7778775:1:exon
so has part: feature:7861942-7862093:1:exon
so has part: feature:7866313-7866387:1:exon
so has part: feature:7866613-7866639:1:exon
so has part: feature:7871568-7871755:1:exon
so has part: feature:7916670-7916757:1:exon
so has part: feature:7928196-7928272:1:exon
so has part: feature:7932605-7932641:1:exon
so has part: feature:7959819-7959916:1:exon
so has part: feature:7986600-7986716:1:exon
so has part: feature:7987434-7987484:1:exon
so has part: feature:7991271-7991425:1:exon
so has part: feature:7991632-7991767:1:exon
so has part: feature:7993512-7993661:1:exon
so has part: feature:7994603-7994776:1:exon
so has part: feature:7995650-7995781:1:exon
so has part: feature:8001980-8002105:1:exon
so has part: feature:8004676-8004839:1:exon
so has part: feature:8013063-8013198:1:exon
so has part: feature:8021724-8022665:1:exon

position:7255322:1
position: 7255322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8022665:1
position: 8022665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7255322-7255826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7432563-7432685:1:exon

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SIO_000300: 3
SIO_000628: feature:7528777-7529048:1:exon

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SIO_000628: feature:7695089-7695397:1:exon

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SIO_000628: feature:7959819-7959916:1:exon

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SIO_000300: 23
SIO_000628: feature:7986600-7986716:1:exon

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SIO_000628: feature:7987434-7987484:1:exon

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urn:…
SIO_000300: 33
SIO_000628: feature:8021724-8022665:1:exon

Ptprm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 214514
gene: Ptprm
product: protein tyrosine phosphatase receptor type M, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048363176.1
SIO_010081: Ptprm
subclass of: SO_0000673
so part of: Ptprm
location: join(7255322..7255826,7432563..7432685,7528777..7529048,7544858..7544936,7564535..7564650,7588397..7588571,7594260..7594553,7695089..7695397,7703240..7703349,7712234..7712435,7717068..7717170,7742206..7742479,7743437..7743473,7778643..7778775,7861942..7862093,7866313..7866387,7866613..7866639,7870869..7870880,7871568..7871755,7916670..7916757,7928196..7928272,7932605..7932641,7959819..7959916,7986600..7986716,7991271..7991425,7991632..7991767,7993512..7993661,7994603..7994776,7995650..7995781,8001980..8002105,8004676..8004839,8013063..8013198,8021724..8022664)
location: region:7255322-8022664:1
so has part: feature:7255322-7255826:1:exon
so has part: feature:7432563-7432685:1:exon
so has part: feature:7528777-7529048:1:exon
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so has part: feature:7564535-7564650:1:exon
so has part: feature:7588397-7588571:1:exon
so has part: feature:7594260-7594553:1:exon
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so has part: feature:7703240-7703349:1:exon
so has part: feature:7712234-7712435:1:exon
so has part: feature:7717068-7717170:1:exon
so has part: feature:7742206-7742479:1:exon
so has part: feature:7743437-7743473:1:exon
so has part: feature:7778643-7778775:1:exon
so has part: feature:7861942-7862093:1:exon
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so has part: feature:7871568-7871755:1:exon
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so has part: feature:7959819-7959916:1:exon
so has part: feature:7986600-7986716:1:exon
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so has part: feature:7991632-7991767:1:exon
so has part: feature:7993512-7993661:1:exon
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so has part: feature:8004676-8004839:1:exon
so has part: feature:8013063-8013198:1:exon
so has part: feature:8021724-8022664:1:exon

position:8022664:1
position: 8022664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7255322-7255826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7432563-7432685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7528777-7529048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7544858-7544936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7564535-7564650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7588397-7588571:1:exon