Staphylococcus nepalensis strain JS11 plasmid pSNJS1102, complete sequence.
type: Entry
definition: Staphylococcus nepalensis strain JS11 plasmid pSNJS1102, complete sequence.
sequence version: NZ_CP017468.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_CP017468.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN05846264
keyword: RefSeq
source: Staphylococcus nepalensis
organism: Staphylococcus nepalensis
taxonomy: Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP017468.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: FALCON v. 0.3.0\nAssembly Name :: FALCON 0.3.0\nGenome Coverage :: 63x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 07:03:14\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,910\nCDSs (total) :: 2,828\nGenes (coding) :: 2,776\nCDSs (with protein) :: 2,776\nGenes (RNA) :: 82\nrRNAs :: 7, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 6, 6 (5S, 16S, 23S)\ntRNAs :: 59\nncRNAs :: 4\nPseudo Genes (total) :: 52\nCDSs (without protein) :: 52\nPseudo Genes (ambiguous residues) :: 0 of 52\nPseudo Genes (frameshifted) :: 28 of 52\nPseudo Genes (incomplete) :: 22 of 52\nPseudo Genes (internal stop) :: 21 of 52\nPseudo Genes (multiple problems) :: 14 of 52\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 25678
topology: circular
so has quality: SO_0000988
location: 1..25678
location: region:1-25678:1
RO_0002162: 214473

NZ_CP017468
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN05846264
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Staphylococcus nepalensis JS11
author: Nam, Y.-D.
author: Kang, J.
author: Chung, W.-H.
journal: Unpublished

2
title: Direct Submission
author: Nam, Y.-D.
author: Kang, J.
author: Chung, W.-H.
journal: Submitted (30-SEP-2016) Fermentation and Functionality, Korea Food Research Institute, 516, Baekhyun-dong, Bundan-gu, Sungnam 463-746, Korea, Republic of

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25678:1
position: 25678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25678:1:source
so part of: sequence
organism: Staphylococcus nepalensis
mol type: genomic DNA
strain: JS11
isolation source: Korean fermented food
plasmid: pSNJS1102
country: South Korea
collection date: 2016-01-28

214473
type: Taxonomy
SIO_000068: taxonomy

BJG89_RS14310
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14310
old locus tag: BJG89_14090
so part of: sequence
location: complement(1060..1833)
location: region:1060-1833:-1
so has part: feature:1060-1833:-1:exon
subclass of: SO_0000010

66778192
type: Gene
SIO_000068: ncbigene

position:1060:-1
position: 1060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1833:-1
position: 1833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060-1833:-1:exon

BJG89_RS14310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14310
old locus tag: BJG89_14090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002484659.1
GO function: GO:0019152 - acetoin dehydrogenase activity [Evidence IEA]
GO process: GO:0045150 - acetoin catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetoin reductase
translation: MNKTAVITGSAGGLGKGIAERLANDGFNLIIQDLNEELLLETEKEFKNNGFNVAAFKSDVSVKKEQKELVQFAVTEFGQIDVFVNNAGVDAVSPFLEIDEEQLSKLFNVNVYGTVFGTQAAAEQFKKQNRGGKIINACSIAGHESYEMLGTYSATKHAVRSFTQTAAKELAQDGITVNAYCPGVAKTKMWDRIDEEMVKYNDDMEPGDAFEEFSSAIKLGRYQEPRDVANLVSFLASEGSGYITGQSILTDGGLVYR
SIO_010081: BJG89_RS14310
subclass of: SO_0000673
so part of: BJG89_RS14310
location: complement(1060..1833)
location: region:1060-1833:-1
so has part: feature:1060-1833:-1:exon

WP_096811223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1060-1833:-1:exon

BJG89_RS14315
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14315
old locus tag: BJG89_14095
so part of: sequence
location: complement(2575..2826)
location: region:2575-2826:-1
so has part: feature:2575-2826:-1:exon
subclass of: SO_0000010

66778193
type: Gene
SIO_000068: ncbigene

position:2575:-1
position: 2575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2826:-1
position: 2826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2575-2826:-1:exon

BJG89_RS14315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14315
old locus tag: BJG89_14095
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIAERRIKIDVDKQLDAMYINFLDASSDSDSDITSEELSLGVYRVYDDTRPYITFRYVILDLSYQDLTQISKMISVPNLKKYI
SIO_010081: BJG89_RS14315
subclass of: SO_0000673
so part of: BJG89_RS14315
location: complement(2575..2826)
location: region:2575-2826:-1
so has part: feature:2575-2826:-1:exon

WP_096810205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2575-2826:-1:exon

BJG89_RS14320
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14320
old locus tag: BJG89_14100
so part of: sequence
location: complement(2798..3184)
location: region:2798-3184:-1
so has part: feature:2798-3184:-1:exon
subclass of: SO_0000010

66778194
type: Gene
SIO_000068: ncbigene

position:2798:-1
position: 2798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3184:-1
position: 3184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2798-3184:-1:exon

BJG89_RS14320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14320
old locus tag: BJG89_14100
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDDYIFSTTDPLNREVRLKKTTWEFHVMNEHEERKHFKGNEDFFENLVSDPDYIFSQESIGPNVRWKYSSYGNIKEEGNPKIYNIIAEDNSNHMDIVTILETSKTQLKESERKKEAKIYDRRKKNKD
SIO_010081: BJG89_RS14320
subclass of: SO_0000673
so part of: BJG89_RS14320
location: complement(2798..3184)
location: region:2798-3184:-1
so has part: feature:2798-3184:-1:exon

WP_096810207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2798-3184:-1:exon

BJG89_RS14325
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14325
old locus tag: BJG89_14105
so part of: sequence
location: complement(3188..3490)
location: region:3188-3490:-1
so has part: feature:3188-3490:-1:exon
subclass of: SO_0000010

66778195
type: Gene
SIO_000068: ncbigene

position:3188:-1
position: 3188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3490:-1
position: 3490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3188-3490:-1:exon

BJG89_RS14325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14325
old locus tag: BJG89_14105
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAYENYYSETDKEEQEDVTIFDEETVYINSIEVMAGKNDGVLIMRSNSPRGIEKELNIMVSPATLKHLADTTSDIVAKYESAFGKLPESEINFLRTPEDE
SIO_010081: BJG89_RS14325
subclass of: SO_0000673
so part of: BJG89_RS14325
location: complement(3188..3490)
location: region:3188-3490:-1
so has part: feature:3188-3490:-1:exon

WP_096810209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3188-3490:-1:exon

BJG89_RS14330
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14330
old locus tag: BJG89_14110
so part of: sequence
location: complement(3717..5327)
location: region:3717-5327:-1
so has part: feature:3717-5327:-1:exon
subclass of: SO_0000010

66778196
type: Gene
SIO_000068: ncbigene

position:3717:-1
position: 3717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5327:-1
position: 5327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3717-5327:-1:exon

BJG89_RS14330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14330
old locus tag: BJG89_14110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002459199.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BCCT family transporter
translation: MNKNESNYSGKRLSPVFTFSIIIITIVVLLGAIFPNQFNNIGNNITGWITEYFGWYYMVIVAVMIFFCVFLIFSPIGKLKLGKPGDKPEFNTISWFAMLFSAGMGIGLVFWGAAEPISHFASPPTGDPQTSHAFKEALRGAFMQWGFHAWAVYAVVALALAYFQFRKNEPALISKTLRPVFGNKIDGPLGTVIDVISVFATIGGVAVSLGLGAMQIAGGLNYLFDIPNNILTQGIIIIIVTILFLASAWSGLSRGIQYLSNANIGLAGIILLFVFIVGPTVLILNMLTSSTGEYLNTLLFNMFDTAPLDPQKNEWLNSWTFFQLAWWISWSPFVGIFIARVSKGRSIREFVSGVMLAPVLVSLVWFAAFGVLGIETAKDHPKIIDMPPETALFGVFNEIPLGFLLSIVTLLLIATFFITSADSATFVLGMQTTYGSLNPSVMVKVIWGIAQALIAFILLFSGGDNGLNALQNMAIMTALPFSVIILVMMVSFYKDANQERKFLGLTLRPNQKRMESYIKQSYEEEIIERRKTSRNS
SIO_010081: BJG89_RS14330
subclass of: SO_0000673
so part of: BJG89_RS14330
location: complement(3717..5327)
location: region:3717-5327:-1
so has part: feature:3717-5327:-1:exon

WP_096810211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3717-5327:-1:exon

BJG89_RS14335
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14335
old locus tag: BJG89_14115
so part of: sequence
location: complement(6288..7679)
location: region:6288-7679:-1
so has part: feature:6288-7679:-1:exon
subclass of: SO_0000010

66778197
type: Gene
SIO_000068: ncbigene

position:6288:-1
position: 6288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7679:-1
position: 7679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6288-7679:-1:exon

BJG89_RS14335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14335
old locus tag: BJG89_14115
EC number: 3.5.1.28
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002512172.1
GO function: GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO process: GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylmuramoyl-L-alanine amidase
translation: MKKQDAVNWAVKQIGKSIDEDGAHGAQCMDEIIAFCKQHFDWHPTGNAIDLSTQKLPEGFQRIKNTDDFVPQQGDIGIIDSGEYGHTNIIVAANEHYYDSIDQNWYNASDQGSPAAFVQNHNYDEFWGVIRPPYEDAEQGVTTESTKLQVINDNINYTMNKRVGSIDGVVIHNTAGSRTAVQDYNALSNASVARYEAGMAHYYIDRFTIWRAIDTYRVAWHVADTYGNGHYLGYEVEESMSASNKDFMMNEQATFKQAAIDMLYYGIEPNTKTVKLHNQFVATACPHRSMALHVDFDPIKQGAPSKAKQREMQNYFIKEIKKYYDNPTLIIGEPNNIPDTVTIPNEEDKKTPVQSKSENVGNKWRRNAHGILWKPEQATFTCKATDSKGNESFIYTRYYGPWAGWPIAGQLHYDQSINYDEVYDYDGYIWLAWTVSSGDRVYMPIGYSNGQGQRVGDAWGDFS
SIO_010081: BJG89_RS14335
subclass of: SO_0000673
so part of: BJG89_RS14335
location: complement(6288..7679)
location: region:6288-7679:-1
so has part: feature:6288-7679:-1:exon

WP_096810213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6288-7679:-1:exon

BJG89_RS14340
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14340
old locus tag: BJG89_14120
so part of: sequence
location: complement(7691..8002)
location: region:7691-8002:-1
so has part: feature:7691-8002:-1:exon
subclass of: SO_0000010

66778198
type: Gene
SIO_000068: ncbigene

position:7691:-1
position: 7691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8002:-1
position: 8002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7691-8002:-1:exon

BJG89_RS14340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14340
old locus tag: BJG89_14120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002512171.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: holin
translation: MEQIIAFAGVISVITIALVQVLKKLNVVPKNWLPVAGVFVGVVIGGVTNFIPEIVSELSIGGRLLAGLISGLMATGIWETFKNREGKNVNKLGAGSESKAPKK
SIO_010081: BJG89_RS14340
subclass of: SO_0000673
so part of: BJG89_RS14340
location: complement(7691..8002)
location: region:7691-8002:-1
so has part: feature:7691-8002:-1:exon

WP_096810215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7691-8002:-1:exon

BJG89_RS14345
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14345
old locus tag: BJG89_14125
so part of: sequence
location: complement(8055..8363)
location: region:8055-8363:-1
so has part: feature:8055-8363:-1:exon
subclass of: SO_0000010

66778199
type: Gene
SIO_000068: ncbigene

position:8055:-1
position: 8055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8363:-1
position: 8363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8055-8363:-1:exon

BJG89_RS14345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14345
old locus tag: BJG89_14125
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNESELTYWIIFTVLPLTVTVVGLFTKVGKDKKYNENRITRIESEVEDHNASLKDIKEEQKQQREDTKVILEVSSKIDSLNSRFDKFEDRFYTHQNNQLTKK
SIO_010081: BJG89_RS14345
subclass of: SO_0000673
so part of: BJG89_RS14345
location: complement(8055..8363)
location: region:8055-8363:-1
so has part: feature:8055-8363:-1:exon

WP_157772549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8055-8363:-1:exon

BJG89_RS14880
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14880
so part of: sequence
location: complement(8403..8816)
location: region:8403-8816:-1
so has part: feature:8403-8816:-1:exon
subclass of: SO_0000010

69103291
type: Gene
SIO_000068: ncbigene

position:8403:-1
position: 8403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8816:-1
position: 8816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8403-8816:-1:exon

BJG89_RS14880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002456912.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XkdX family protein
translation: MKVIYNYYDGTTYLLFNDDEEWPEGDWTEVPPPTGIYEPYYFDGEKWIGTSKEEYEKNNPPDPYKPSDIEMDVASIIKKLYLTDEENNAPDFDTIKRYYEKNCYTKEDVIFYTEENCITEEQYEKITGEKYPEQPQA
SIO_010081: BJG89_RS14880
subclass of: SO_0000673
so part of: BJG89_RS14880
location: complement(8403..8816)
location: region:8403-8816:-1
so has part: feature:8403-8816:-1:exon

WP_232514168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8403-8816:-1:exon

BJG89_RS14355
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14355
old locus tag: BJG89_14135
so part of: sequence
location: complement(8827..10065)
location: region:8827-10065:-1
so has part: feature:8827-10065:-1:exon
subclass of: SO_0000010

66778201
type: Gene
SIO_000068: ncbigene

position:8827:-1
position: 8827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10065:-1
position: 10065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8827-10065:-1:exon

BJG89_RS14355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14355
old locus tag: BJG89_14135
inference: COORDINATES: protein motif:HMM:NF022117.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BppU family phage baseplate upper protein
translation: MNNLEKIGRLKANILPKESTIGKGILAYYSADNNTSVIRLQVNRENGNLLLGEPNVCPMISLFFADKSKYINQEMNIVDPFTGTIEYTLTDEQLEKTGDVKVVVTIERKGSEDRVYVCDFTIAILDSGIETLEPNEVVIQVGNVVQLRKQLQELEGKISLAEESLLRVINDGLSQLDNKKQEVNKSFDETLEQIETKRANVLSEFNGAITDVDNVANNAIEIIENNQAVKLNDYNNDKKTINNDINESLNLSKSYTDEQLENANTEISTSIEQKSKNAESNAKVYTDNLISRVDSDIANNRVSVTPFTDITFKNGFSNVTDTVKWSVYRTISHGNGLIEIELFINVKGPFAVGRNVVGVLSNNIAPKKTFSVGGRGSDNEPLSLQIGVTGEIAVYVKNTTTYADGKINYYLI
SIO_010081: BJG89_RS14355
subclass of: SO_0000673
so part of: BJG89_RS14355
location: complement(8827..10065)
location: region:8827-10065:-1
so has part: feature:8827-10065:-1:exon

WP_096810219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8827-10065:-1:exon

BJG89_RS14360
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14360
old locus tag: BJG89_14140
so part of: sequence
location: complement(10077..11738)
location: region:10077-11738:-1
so has part: feature:10077-11738:-1:exon
subclass of: SO_0000010

66778202
type: Gene
SIO_000068: ncbigene

position:10077:-1
position: 10077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11738:-1
position: 11738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10077-11738:-1:exon

BJG89_RS14360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14360
old locus tag: BJG89_14140
inference: COORDINATES: protein motif:HMM:NF021507.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphodiester glycosidase family protein
translation: MKLKKDLPIQIGQAFRSMLVENFNRLENKIYNKDIEDRKHRTNEFAAHNSKQIKHNETNVEKQLNYNSGRTSNLVVGSDEYGQKEVIDARVDREGESHELLSERLLSDFNDVYNTTSFVPNIDFQKLHYRVGDTDTEYYLMDVPTYDNQGNKLKLKHGFAAEKFGDGNRETARTFSDRNYASAVFNGSVFNTSNFNLIGNQIKDGKIYQSDSYTDRSYRWHLGFKEDGTMKIYPNGTSATTMLEDGIVNSITAFYPIILNKEHRPDIYHQHADSKTFHPRQVIAQRENGDYVFLSSEGRNVKHRGLSIDDCYEILSANYNDITNAYVLDGGGSTSSVVNGTMINRPNDSSLTAERSVPDFLYVSKEVISESDKHLYSVMKQVGYVRKELSNLESAVLYMRDMNLGHIRLYQNAPFDQYGIEIRRKENGEDKYLGKLTMNDEIISYKPYPLEVGNVPLFQVDKNDVWFNGQRLGNSYHVTKNINKITEITYSGWYYMDKDASDNPYKSEDTGCYVLYMTTDNHSGMAIATPLSNQKQKRRLKQDDAWQDWISNV
SIO_010081: BJG89_RS14360
subclass of: SO_0000673
so part of: BJG89_RS14360
location: complement(10077..11738)
location: region:10077-11738:-1
so has part: feature:10077-11738:-1:exon

WP_096810222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10077-11738:-1:exon

BJG89_RS14365
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14365
old locus tag: BJG89_14145
so part of: sequence
location: complement(11735..12097)
location: region:11735-12097:-1
so has part: feature:11735-12097:-1:exon
subclass of: SO_0000010

66778203
type: Gene
SIO_000068: ncbigene

position:11735:-1
position: 11735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12097:-1
position: 12097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11735-12097:-1:exon

BJG89_RS14365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14365
old locus tag: BJG89_14145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002462648.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNEPTEIKYPLDENGEPYYAATHIQAVQGLNFNEDEDLSTVIFNLQKEVNRVSEENTNLRNSLEDSKTKISELNTNIGTSKNTIETLKTKTGSLEVTVKNLQDEIEQLKGSSTNEGGSGE
SIO_010081: BJG89_RS14365
subclass of: SO_0000673
so part of: BJG89_RS14365
location: complement(11735..12097)
location: region:11735-12097:-1
so has part: feature:11735-12097:-1:exon

WP_096810223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11735-12097:-1:exon

BJG89_RS14370
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14370
old locus tag: BJG89_14150
so part of: sequence
location: complement(12090..13679)
location: region:12090-13679:-1
so has part: feature:12090-13679:-1:exon
subclass of: SO_0000010

66778204
type: Gene
SIO_000068: ncbigene

position:12090:-1
position: 12090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13679:-1
position: 13679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12090-13679:-1:exon

BJG89_RS14370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14370
old locus tag: BJG89_14150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002498290.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prophage endopeptidase tail family protein
translation: MKDMVLKNKKGTFGEILVDYDFGSWKLNYEKNNERSIDFTIYKTYSNSDLFDALLNEMLIVWEGQEYVIKSTSIKYDGAVVSNDVTAKHIFMEFQNHYIQKDLENEEMNSDETTDEDNKPTMTLEQYLEFGFRGNKLGFTYEIKGKFTNRVSIDELGNKNGMEFITEGAELFNYIYFADNKKIYIYDEEAFYEMADIPLIYKYNSSEVQATVTSTDVKTYIQGYGKKKTKAETNNYNPVKPKDISYSGTFIKDGTWRTEVVGASYTKTFECKHGNERLEWTLKKMAKGGLLDVYLDDELVGRYECYSKTATSEKIVISRNLSRGKHTFKAVFRGAKPGIDYKNSKPCMYVGTEKSTVLNITAVLKGTDMYHAYAEWPSPNMGAFGFAEAPTVFDDNALDEDELLKKIKAELNDQPTVEVSTNYLGSVEEKHYIGHDDIKENNTIRFIHQPLGYNLDLKVVKLTASHPLVNEPIEVDFSNSPTDIIKIQQGISRNIKKMNNLVKGGSLGGSSFTMPRLASDSIGSVLIDE
SIO_010081: BJG89_RS14370
subclass of: SO_0000673
so part of: BJG89_RS14370
location: complement(12090..13679)
location: region:12090-13679:-1
so has part: feature:12090-13679:-1:exon

WP_096810225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12090-13679:-1:exon

BJG89_RS14885
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14885
so part of: sequence
location: complement(13689..13871)
location: region:13689-13871:-1
so has part: feature:13689-13871:-1:exon
subclass of: SO_0000010

69103292
type: Gene
SIO_000068: ncbigene

position:13689:-1
position: 13689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13871:-1
position: 13871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13689-13871:-1:exon

BJG89_RS14885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14885
inference: COORDINATES: protein motif:HMM:NF017520.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail family protein
translation: MKKNQQLVINGVHPFINNKRVGIDTNWQWLTLDKGFNDIEITGENIGNVQTRWIFPFIYR
SIO_010081: BJG89_RS14885
subclass of: SO_0000673
so part of: BJG89_RS14885
location: complement(13689..13871)
location: region:13689-13871:-1
so has part: feature:13689-13871:-1:exon

WP_232514246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13689-13871:-1:exon

BJG89_RS14890
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14890
so part of: sequence
location: complement(14169..14375)
location: region:14169-14375:-1
so has part: feature:14169-14375:-1:exon
subclass of: SO_0000010

69103293
type: Gene
SIO_000068: ncbigene

position:14169:-1
position: 14169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14375:-1
position: 14375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14169-14375:-1:exon

BJG89_RS14890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: phage tail family protein
translation: MKGVDGELPGVASFAPFNLVVKFGFDGIDEIDINLMEQKLRSIFYKRTPYYIVTSDNPGIKYKLIIQT
SIO_010081: BJG89_RS14890
subclass of: SO_0000673
so part of: BJG89_RS14890
location: complement(14169..14375)
location: region:14169-14375:-1
so has part: feature:14169-14375:-1:exon

WP_232514243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14169-14375:-1:exon

BJG89_RS14380
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14380
old locus tag: BJG89_14160
so part of: sequence
location: complement(14529..15086)
location: region:14529-15086:-1
so has part: feature:14529-15086:-1:exon
subclass of: SO_0000010

66778206
type: Gene
SIO_000068: ncbigene

position:14529:-1
position: 14529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15086:-1
position: 15086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14529-15086:-1:exon

BJG89_RS14380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14380
old locus tag: BJG89_14160
inference: COORDINATES: protein motif:HMM:NF013618.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase SLT domain-containing protein
translation: MNWQSKAVGPGSSEGNPKGLVQVKPGTFNAFKLSGHGNIFNGLDNLIAGMRYAKETYGGRMLKKIGVGGPYANGGIVTKHQIAEVGEKNRAEAIIPLHKSKRNRAVGLMEKAMTAIGMDNGSANVTVNNDNSTIEKMLSQLVRVNDQNNKLTQTIIKLLSNQKQGSPKDAANILSQILGRRYENG
SIO_010081: BJG89_RS14380
subclass of: SO_0000673
so part of: BJG89_RS14380
location: complement(14529..15086)
location: region:14529-15086:-1
so has part: feature:14529-15086:-1:exon

WP_157772565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14529-15086:-1:exon

BJG89_RS14385
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14385
old locus tag: BJG89_14165
so part of: sequence
location: complement(15062..21490)
location: region:15062-21490:-1
so has part: feature:15062-21490:-1:exon
subclass of: SO_0000010

66778207
type: Gene
SIO_000068: ncbigene

position:15062:-1
position: 15062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21490:-1
position: 21490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15062-21490:-1:exon

BJG89_RS14385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14385
old locus tag: BJG89_14165
inference: COORDINATES: protein motif:HMM:TIGR01760.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail tape measure protein
translation: MENIEGYAIKNTMDNTGVEEGMKGLKRQMGVLSSEVKANMSSFGKAEKSVQKYQTRIEGLNNKMKVQKKMYDQAKTNLNNVKSSYEKATNSIKQQEQKVKELAEAHKKQDEAMRKSNQEMKKSNKELDNAKMKQSVLSAEKAKAKTKLDDLRSAERRLKESGKASTEQIKQASNATKQQREVHQKLIASHKEETANVKKLTQSNKSITEENKKVKASYQQSNDAVKTAEKEYDKLSKTIKDYPKDLAKAEKAVNNEKASMNGLQKSIDKAEQELKQMNKQQMIANSSYTKQADHLDKMSEKYGKMSQNMRSVGRNMSMYVTTPIAGAMGYAGKLGVEFDDGMRKVQAISGATGKDLDALKAKAREMGATTKFSASDSAEAMNYMAMAGWKSQDMMSGLPGIMDLAAASGEELGTVSDIVTDGLTAFGLEAKDSGRFADVLASASANANTNVQMMGEGFKYAAPVAGALGYSIEDTSTAIGLMSNAGIKGQKAGTALRTMFTNLSKPTAGMKDKMDELGISITDSKGEMLPMRDVMDQLRDKMGGLSKDQQAATASTIFGKEAMSGALAVINASQEDYDKLSKSIDNSEGSAKKMGDTMEKGLGGSLRELKSAAEELGLSVFETIQPALSGMVGGLKSTVDFLNDLPKGAKVAGVAIAGVAAAIGPVTLGVGLLLRAVQAAAGGYAQLNRRMAENSAEAAINAGATKANAGAITASGKSAKGSAGLFGRFGKSTGKAAGKVSLLGQASKVLGNGIKILGGPIGWIITGVTLLGGAFIKAYNNVDWFKKGVDGLFDVIKTFGGGAIDQLKNLGGWFSKTGSKIKETFFDEMKQGYKDLDDDDLLKKAGDGFKKFMDKVGTASDKATDTTKVLGKGVSKETKNALDKYVKYSEDTTRVLSDIKLNHGKITDDMREKLETSVRKGGEEALKQIQKRNKKVSDELNDMLENSEAFTAQEKQDMIQKNQEASDEKIKRLEELNQEIEELELKQFNDGKLTAQEEKDLKAKLDERNRITTESIAKGQKEQQAILSRMNANTGAIDTQQASEAIKDAVKAEKKAKKEAKKQREDDVVQADDLLAYGEIDQKEHDKRVREIEDAYDEAIDTAEGKTGDIRKSVKKNNKDIADDIDLSSGHVYSNSEKWYKKTKNFIKDDWNSFWQDVGSQASGIGTWIGDQTDEIIGAFKKGWGKVEDFFTETDWKELVNGWFENIGEWIASPFKAIGEDIGDAVSSWKENISEAGEDIKSGFDTITGWFSEQGQEFWDALKEGWNIAIEAGGDLWNSLTGWLGETYENVSGWFVEKGSNIWSSLKNGWNTAIETGGDLWQSLTGWLSEKWESTKEWFSEKGGHIWSNIKTGWNNALETGGNLWSYLTGWLGEKWEDTKEWFSQKGHHIWSNIKTGWNDALEIGGNLWSSLTSWLGEKWEETKTWFSQKGGHIWSNIKSGWNNALETGGNLWSSITNKLGESWENTKGWFSEKGQNIQQSFKNGWNSAWDTAGNIWGKVTKGVSDTWENVKTSTRDKLEEAKGTATDKTKGIWKNTSKWFGDTYNSAKDKVTGVYTKTRDKFTDAAGKVWDKSKSAYDGTKKWFGETYEKAKTKVTGVYNQAKGKFTDTASTAWDKSKSTWKGTSKYFGQAYSSVKTNVSNMWGKAKTSFGNIAGEGWKKAESVYKGFKKWLGDTLQWIKDIGADMGKAAGDLGKTVANKAVDGLNGMIGGVNKISKAITGKNELIKKIPHLATGTYDGSTLSTDSNGGLRQPTVAMVNDKGPGNGPGGRTQELIQRKDGSIDAPQGKNTIVGLGKGDGVINARHTHKLQEQGIIPKRLSTGTGTKIPRFSKSSKKKKTYEQIADSIKDVSGGFKDKASKTAHGIKDKTADAMETVGDKMKDSASWLGEKIGDVWKYVKHPGKLVNKVMDSIGINFGGGDNATVNLVKAAYKNLKSSLVDKVKDWFTEAKGGNGDASWLPWDNILQTFGHYTGGLMFNGGRHYGIDFGMPIGTPVKAVA…
SIO_010081: BJG89_RS14385
subclass of: SO_0000673
so part of: BJG89_RS14385
location: complement(15062..21490)
location: region:15062-21490:-1
so has part: feature:15062-21490:-1:exon

WP_096811283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15062-21490:-1:exon

BJG89_RS14660
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14660
so part of: sequence
location: complement(21513..21674)
location: region:21513-21674:-1
so has part: feature:21513-21674:-1:exon
subclass of: SO_0000010

66778260
type: Gene
SIO_000068: ncbigene

position:21513:-1
position: 21513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21674:-1
position: 21674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21513-21674:-1:exon

BJG89_RS14660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002442368.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHYGWTLTEVKAQPYFQLLSILNEDDKKDKQKTKSKKEQEVIKGKDLIKLFGG
SIO_010081: BJG89_RS14660
subclass of: SO_0000673
so part of: BJG89_RS14660
location: complement(21513..21674)
location: region:21513-21674:-1
so has part: feature:21513-21674:-1:exon

WP_169929328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21513-21674:-1:exon

BJG89_RS14395
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14395
old locus tag: BJG89_14170
so part of: sequence
location: complement(21719..22069)
location: region:21719-22069:-1
so has part: feature:21719-22069:-1:exon
subclass of: SO_0000010

66778208
type: Gene
SIO_000068: ncbigene

position:21719:-1
position: 21719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22069:-1
position: 22069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21719-22069:-1:exon

BJG89_RS14395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14395
old locus tag: BJG89_14170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001642704.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKFEIKNQETGKVESYSKDVITMGEAERFYEWMESREKEVNKEKPDMKKVRKMERDYLVSLFEKQGLTEEDILNNMGTKAYSYVLGEIFREISGEDETNSEDEASQEGKTEEHSQ
SIO_010081: BJG89_RS14395
subclass of: SO_0000673
so part of: BJG89_RS14395
location: complement(21719..22069)
location: region:21719-22069:-1
so has part: feature:21719-22069:-1:exon

WP_096810231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21719-22069:-1:exon

BJG89_RS14400
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14400
old locus tag: BJG89_14175
so part of: sequence
location: complement(22137..22667)
location: region:22137-22667:-1
so has part: feature:22137-22667:-1:exon
subclass of: SO_0000010

66778209
type: Gene
SIO_000068: ncbigene

position:22137:-1
position: 22137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22667:-1
position: 22667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22137-22667:-1:exon

BJG89_RS14400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14400
old locus tag: BJG89_14175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017722731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ig-like domain-containing protein
translation: MADILKIYKNDEVVASAERGEDGKANVTIEGLDADTAYEAGTHQAAFSNDNGESDKTDVPGFKTNPIKVTGVSLDKESLTLNIGDTATIQPTVAPSTATNKGVAYASSNRDVATVNEDGTITAIADGTANIEVTTEDGNKKATCAVTVETEEEPTPEEPDNVEVEANENDADVSAE
SIO_010081: BJG89_RS14400
subclass of: SO_0000673
so part of: BJG89_RS14400
location: complement(22137..22667)
location: region:22137-22667:-1
so has part: feature:22137-22667:-1:exon

WP_096810232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22137-22667:-1:exon

BJG89_RS14405
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14405
old locus tag: BJG89_14180
so part of: sequence
location: complement(22764..23252)
location: region:22764-23252:-1
so has part: feature:22764-23252:-1:exon
subclass of: SO_0000010

66778210
type: Gene
SIO_000068: ncbigene

position:22764:-1
position: 22764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23252:-1
position: 23252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22764-23252:-1:exon

BJG89_RS14405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14405
old locus tag: BJG89_14180
inference: COORDINATES: protein motif:HMM:NF016511.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MRASNKTVWSKKQGTGEVQSELDVFNVPDKDLDAVLGRDSDENGTSWVGEKTRAPYVALIGESEDLLSGEPVYLALTKGTMSLESIEWKTTPKEAEEPEPQQLTGDWIARTINGESRTYGYHVGKEGSDELFQSVFPGYENVGEGEMPDNDNSNDNEAVETP
SIO_010081: BJG89_RS14405
subclass of: SO_0000673
so part of: BJG89_RS14405
location: complement(22764..23252)
location: region:22764-23252:-1
so has part: feature:22764-23252:-1:exon

WP_232514244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22764-23252:-1:exon

BJG89_RS14895
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14895
so part of: sequence
location: complement(23156..23392)
location: region:23156-23392:-1
so has part: feature:23156-23392:-1:exon
subclass of: SO_0000010

69103294
type: Gene
SIO_000068: ncbigene

position:23156:-1
position: 23156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23392:-1
position: 23392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23156-23392:-1:exon

BJG89_RS14895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14895
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVVGFEKVHVGIFDEDEKIKKLMTWKDAKGGTVNLNISGLAPEKLKCVLQIRRYGLRNKEQAKFSQNWMYLMYQIKI
SIO_010081: BJG89_RS14895
subclass of: SO_0000673
so part of: BJG89_RS14895
location: complement(23156..23392)
location: region:23156-23392:-1
so has part: feature:23156-23392:-1:exon

WP_232514245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23156-23392:-1:exon

BJG89_RS14410
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14410
old locus tag: BJG89_14185
so part of: sequence
location: complement(23425..23820)
location: region:23425-23820:-1
so has part: feature:23425-23820:-1:exon
subclass of: SO_0000010

66778211
type: Gene
SIO_000068: ncbigene

position:23425:-1
position: 23425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23820:-1
position: 23820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23425-23820:-1:exon

BJG89_RS14410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14410
old locus tag: BJG89_14185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001023807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNILKYITNIIINDPILASEVNNRIYYYEVTEVDDTSDAFVVLTPILDRPSTYVSDKYLSETYFFQVDVESYNHQQTIDITKRIRYLLSNENLNQASSQLDDYFKATQRYVMSRRYRGIPKYQYYKGERVE
SIO_010081: BJG89_RS14410
subclass of: SO_0000673
so part of: BJG89_RS14410
location: complement(23425..23820)
location: region:23425-23820:-1
so has part: feature:23425-23820:-1:exon

WP_065865682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23425-23820:-1:exon

BJG89_RS14415
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14415
old locus tag: BJG89_14190
so part of: sequence
location: complement(23817..24242)
location: region:23817-24242:-1
so has part: feature:23817-24242:-1:exon
subclass of: SO_0000010

66778212
type: Gene
SIO_000068: ncbigene

position:23817:-1
position: 23817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24242:-1
position: 24242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23817-24242:-1:exon

BJG89_RS14415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14415
old locus tag: BJG89_14190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017722728.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKPKINGIYDVKLKGEKELMKKMEAKFGQKAMQVKNDKALIEASDFLKEELKYQFEDFRDTGATIQEMKRGNPETVAGQRRIMIHWEGPKERKNIIHLNEHGYTRNGKKYTPQGYGVIAKTLDASQTKYRGIIRRELNKK
SIO_010081: BJG89_RS14415
subclass of: SO_0000673
so part of: BJG89_RS14415
location: complement(23817..24242)
location: region:23817-24242:-1
so has part: feature:23817-24242:-1:exon

WP_046100246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23817-24242:-1:exon

BJG89_RS14535
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14535
so part of: sequence
location: complement(24235..24390)
location: region:24235-24390:-1
so has part: feature:24235-24390:-1:exon
subclass of: SO_0000010

66778235
type: Gene
SIO_000068: ncbigene

position:24235:-1
position: 24235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24390:-1
position: 24390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24235-24390:-1:exon

BJG89_RS14535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14535
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDAQRQFIPKYQHTIKVKDYRFETQLFNIYDIRFDKPKAGYITVVVAENE
SIO_010081: BJG89_RS14535
subclass of: SO_0000673
so part of: BJG89_RS14535
location: complement(24235..24390)
location: region:24235-24390:-1
so has part: feature:24235-24390:-1:exon

WP_157772550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24235-24390:-1:exon

BJG89_RS14420
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14420
so part of: sequence
location: complement(24390..24569)
location: region:24390-24569:-1
so has part: feature:24390-24569:-1:exon
subclass of: SO_0000010

66778213
type: Gene
SIO_000068: ncbigene

position:24569:-1
position: 24569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24390-24569:-1:exon

BJG89_RS14420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14420
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQFKNFNTYLTFYDMVKTGPYPDDLEEKEVYSCKVEKYDNSIKDRQVLTTNGKTQGFTL
SIO_010081: BJG89_RS14420
subclass of: SO_0000673
so part of: BJG89_RS14420
location: complement(24390..24569)
location: region:24390-24569:-1
so has part: feature:24390-24569:-1:exon

WP_096810236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24390-24569:-1:exon

BJG89_RS14430
type: Gene
subclass of: SO_0000704
RO_0002162: 214473
locus tag: BJG89_RS14430
old locus tag: BJG89_14200
pseudo: true
so part of: sequence
location: complement(24936..>25676)
location: region:24936-25676:-1
so has part: feature:24936-25676:-1:exon
subclass of: SO_0000010

66778215
type: Gene
SIO_000068: ncbigene

position:24936:-1
position: 24936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25676:-1
position: 25676
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24936-25676:-1:exon

BJG89_RS14430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 214473
locus tag: BJG89_RS14430
old locus tag: BJG89_14200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017722725.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0019068 - virion assembly [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phage major capsid protein
SIO_010081: BJG89_RS14430
subclass of: SO_0000673
so part of: BJG89_RS14430
location: complement(24936..>25676)
location: region:24936-25676:-1
so has part: feature:24936-25676:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24936-25676:-1:exon