Spiroplasma poulsonii strain MSRO_BK plasmid pSMSRO-BK, whole genome shotgun sequence.
type: Entry
definition: Spiroplasma poulsonii strain MSRO_BK plasmid pSMSRO-BK, whole genome shotgun sequence.
sequence version: NZ_CM020867.1
sequence date: 2023-03-13
sequence: sequence
division: CON
label: NZ_CM020867.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN11349289
keyword: WGS
keyword: RefSeq
source: Spiroplasma poulsonii
organism: Spiroplasma poulsonii
taxonomy: Bacteria; Mycoplasmatota; Mollicutes; Entomoplasmatales; Spiroplasmataceae; Spiroplasma.
reference: 1
references: 31912942
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020867.1.\nBacteria and source DNA available from Lemaitre's EPFL lab.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 2\nReference-guided Assembly :: GCF_000820525.2\nGenome Coverage :: 122.72x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/13/2023 17:13:12\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,304\nCDSs (total) :: 2,267\nGenes (coding) :: 2,193\nCDSs (with protein) :: 2,193\nGenes (RNA) :: 37\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 31\nncRNAs :: 3\nPseudo Genes (total) :: 74\nCDSs (without protein) :: 74\nPseudo Genes (ambiguous residues) :: 0 of 74\nPseudo Genes (frameshifted) :: 35 of 74\nPseudo Genes (incomplete) :: 29 of 74\nPseudo Genes (internal stop) :: 23 of 74\nPseudo Genes (multiple problems) :: 11 of 74\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 27457
topology: circular
so has quality: SO_0000988
location: 1..27457
location: region:1-27457:1
RO_0002162: 2138

NZ_CM020867
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN11349289
type: BioSample
SIO_000068: biosample

1
title: Blind killing of both male and female Drosophila embryos by a natural variant of the endosymbiotic bacterium Spiroplasma poulsonii
author: Masson, F.
author: Calderon-Copete, S.
author: Schupfer, F.
author: Vigneron, A.
author: Rommelaere, S.
author: Garcia-Arraez, M.G.
author: Paredes, J.C.
author: Lemaitre, B.
journal: Cell Microbiol 22 (5), e13156 (2020)
pubmed: 31912942

31912942
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Masson, F.
journal: Submitted (10-APR-2019) Global Health Institute - Bruno Lemaitre Research Group, Ecole Polytechnique Federale de Lausanne, EPFL-SV-GHI-UPLEM, Bat SV, Station 19, Lausanne 1015, Switzerland

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27457:1
position: 27457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-27457:1:source
so part of: sequence
organism: Spiroplasma poulsonii
mol type: genomic DNA
strain: MSRO_BK
isolation source: Laboratory rearing
host: Drosophila melanogaster Oregon
plasmid: pSMSRO-BK
country: Switzerland
collection date: 2016

2138
type: Taxonomy
SIO_000068: taxonomy

MSROBK_RS10985
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS10985
so part of: sequence
location: join(27449..27457,1..827)
location: region:1-27457:1
so has part: feature:27449-27457:1:exon
so has part: feature:1-827:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:27449-27457:1:exon

position:27449:1
position: 27449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-827:1:exon

position:827:1
position: 827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MSROBK_RS10985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS10985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611288.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: IS5 family transposase
translation: MNNNKFNTLNNREWLRLTGIKKSTFNKMLDILKVAEIEKFKKGGKTNKLSLENRLLMTLLYWREYQTYFHLGKSFDISEANCYRNIKWIEDILIKNSDFQQLAGKKALINDYFNDKTIIIDATETPIQRPKKGQKQSYSGKKKKHTIKTQVIIEQETKKIIATSFSLGKKHDYALFKESKIPILKNTKLIVDSGYQGIQKNHNNVLIPTKKTKKNPLNKEQKQYNRLVSKMRIIIENIFAILKKFKIITEKYRNRRKRFGLRFNLIASIYNLQLLYLT
SIO_010081: MSROBK_RS10985
subclass of: SO_0000673
so part of: MSROBK_RS10985
location: join(27449..27457,1..388,388..827)
location: region:1-27457:1
so has part: feature:27449-27457:1:exon
so has part: feature:1-388:1:exon
so has part: feature:388-827:1:exon

WP_105629026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27449-27457:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-388:1:exon

position:388:1
position: 388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:388-827:1:exon

MSROBK_RS10990
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS10990
so part of: sequence
location: complement(1389..2223)
location: region:1389-2223:-1
so has part: feature:1389-2223:-1:exon
subclass of: SO_0000010

position:1389:-1
position: 1389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2223:-1
position: 2223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389-2223:-1:exon

MSROBK_RS10990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS10990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611288.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: IS5 family transposase
translation: MNNNKFNTLNDREWLRLTGIKKSTFNKMLDILKVVEIEKFKKGGKTNKLSLENRLLMTLLYWREYQTYFHLGKSFDISEANCYRNIKWIEDILIKNSDFQQLAGKKALINDYFNDKTIIIDATETPIQRPKKTQKQSYSGKKKKHTIKTQVIIEQETKKIIATSFSLGKKHDYALFKESKIPILKNTKLIVDSGYQGIQKNHNNVLIPTKKTKKNPLNKEQKQYNRLVSKMRIIIENIFAILKKFKIITEKYRNRRKRFGLRFNLIASIYNLQLLYLT
SIO_010081: MSROBK_RS10990
subclass of: SO_0000673
so part of: MSROBK_RS10990
location: complement(join(1389..1827,1826..2223))
location: region:1389-2223:-1
so has part: feature:1826-2223:-1:exon
so has part: feature:1389-1827:-1:exon

WP_159373296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1826-2223:-1:exon

position:1826:-1
position: 1826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1389-1827:-1:exon

position:1827:-1
position: 1827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MSROBK_RS10995
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS10995
old locus tag: MSROBK_P00060
so part of: sequence
location: complement(3143..3622)
location: region:3143-3622:-1
so has part: feature:3143-3622:-1:exon
subclass of: SO_0000010

position:3143:-1
position: 3143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3622:-1
position: 3622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3143-3622:-1:exon

MSROBK_RS10995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS10995
old locus tag: MSROBK_P00060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: lipoprotein
translation: MKKLLSILWAVSLTATGASSVVACGGGKAKSFNKLNPAKETKPVSSPVSPLVQSKQKVDISLLSKIDSPEKIIAKDIKKVSKDEYLPLIKNKIHEAINNFNKSLIWKNDLTIEWNFRGWFEGGHLDLSTPKTGTLWITGINNATGFTKITITLPIATEL
SIO_010081: MSROBK_RS10995
subclass of: SO_0000673
so part of: MSROBK_RS10995
location: complement(3143..3622)
location: region:3143-3622:-1
so has part: feature:3143-3622:-1:exon

WP_105629059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3143-3622:-1:exon

MSROBK_RS11000
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11000
old locus tag: MSROBK_P00070
so part of: sequence
location: complement(3881..4033)
location: region:3881-4033:-1
so has part: feature:3881-4033:-1:exon
subclass of: SO_0000010

position:3881:-1
position: 3881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4033:-1
position: 4033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3881-4033:-1:exon

MSROBK_RS11000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11000
old locus tag: MSROBK_P00070
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MNNKLLASLKNKIDNTASQIPKEESFNEIKEEIIYSKIKYKKRLLEKIFQ
SIO_010081: MSROBK_RS11000
subclass of: SO_0000673
so part of: MSROBK_RS11000
location: complement(3881..4033)
location: region:3881-4033:-1
so has part: feature:3881-4033:-1:exon

WP_157944264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3881-4033:-1:exon

MSROBK_RS12220
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS12220
old locus tag: MSROBK_P00080
so part of: sequence
location: complement(4036..4548)
location: region:4036-4548:-1
so has part: feature:4036-4548:-1:exon
subclass of: SO_0000010

position:4036:-1
position: 4036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4548:-1
position: 4548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4036-4548:-1:exon

MSROBK_RS12220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS12220
old locus tag: MSROBK_P00080
inference: COORDINATES: protein motif:HMM:NF025001.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: ParA family protein
translation: MVLETNNIVLNQPNSEFRFKMNLEEIENLLINKFDYIFFDTYPSMNTILLNVLLASDEIIVPIEPHSYSFEGITTMFKPYLETINNSKKMGMNIKNNINYYVLNKIQKNKLHQSVFELISQNEIGKKLLDTHIPLSATKQKETMVLKFAAITEKNPIYKLVMELTDKGVI
SIO_010081: MSROBK_RS12220
subclass of: SO_0000673
so part of: MSROBK_RS12220
location: complement(4036..4548)
location: region:4036-4548:-1
so has part: feature:4036-4548:-1:exon

WP_105629060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4036-4548:-1:exon

MSROBK_RS12245
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS12245
old locus tag: MSROBK_P00090
so part of: sequence
location: complement(4566..4817)
location: region:4566-4817:-1
so has part: feature:4566-4817:-1:exon
subclass of: SO_0000010

position:4566:-1
position: 4566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4817:-1
position: 4817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4566-4817:-1:exon

MSROBK_RS12245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS12245
old locus tag: MSROBK_P00090
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: ParA family protein
translation: MKKITFCNSKGGVGKTTLTVNVAQILSQVGKKVLLFDFDPQANLTNTLLENPIDTNDISKWILGADKDDLISTIVETRISNIF
SIO_010081: MSROBK_RS12245
subclass of: SO_0000673
so part of: MSROBK_RS12245
location: complement(4566..4817)
location: region:4566-4817:-1
so has part: feature:4566-4817:-1:exon

WP_105629061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4566-4817:-1:exon

MSROBK_RS11015
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11015
old locus tag: MSROBK_P00100
so part of: sequence
location: complement(4926..5261)
location: region:4926-5261:-1
so has part: feature:4926-5261:-1:exon
subclass of: SO_0000010

position:4926:-1
position: 4926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5261:-1
position: 5261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4926-5261:-1:exon

MSROBK_RS11015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11015
old locus tag: MSROBK_P00100
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MLIKWLVVQTDIVHYKTERELKMENGNLKGYPDLLIETTDNKNILIECERTRKAKTRYKAIFDSVVSYLKQDYECWWIVSNQAMAKFINERIKEDNWRIEQHKVILFNYIV
SIO_010081: MSROBK_RS11015
subclass of: SO_0000673
so part of: MSROBK_RS11015
location: complement(4926..5261)
location: region:4926-5261:-1
so has part: feature:4926-5261:-1:exon

WP_133165091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4926-5261:-1:exon

MSROBK_RS11980
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11980
so part of: sequence
location: complement(5652..5798)
location: region:5652-5798:-1
so has part: feature:5652-5798:-1:exon
subclass of: SO_0000010

position:5652:-1
position: 5652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5798:-1
position: 5798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5652-5798:-1:exon

MSROBK_RS11980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: transposase
translation: MAKNHYTDEFKQQIVSLYKTGKTAKQLSSDYQVGKSTVWKWIHELIFK
SIO_010081: MSROBK_RS11980
subclass of: SO_0000673
so part of: MSROBK_RS11980
location: complement(5652..5798)
location: region:5652-5798:-1
so has part: feature:5652-5798:-1:exon

WP_206780860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5652-5798:-1:exon

MSROBK_RS11025
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11025
so part of: sequence
location: complement(6336..7171)
location: region:6336-7171:-1
so has part: feature:6336-7171:-1:exon
subclass of: SO_0000010

position:6336:-1
position: 6336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7171:-1
position: 7171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6336-7171:-1:exon

MSROBK_RS11025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611288.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: IS5 family transposase
translation: MNNNKFNTLNNREWLRLTGIKKSTFNKMLDILKVAEIEKFKKGGKTNKLSLENRLLMTLLYWREYQTYFHLGKSFDISEANCYRNIKWIEDILIKNSDFQQLAGKKALINDYFNDKTIIIDATETPIQRPKKGQKQSYSGKKKKHTIKTQVIIEQETKKIIATSFSLGKKHDYALFKESKIPILKNTKLIVDSGYQGIQKNHNNVLIPTKKTKKNPLNKEQKQYNRLVSKMRIIIENIFAILKKFKIITEKYRNRRKRFGLRFNLIASIYNLQLLYLT
SIO_010081: MSROBK_RS11025
subclass of: SO_0000673
so part of: MSROBK_RS11025
location: complement(join(6336..6775,6775..7171))
location: region:6336-7171:-1
so has part: feature:6775-7171:-1:exon
so has part: feature:6336-6775:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6775-7171:-1:exon

position:6775:-1
position: 6775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6336-6775:-1:exon

MSROBK_RS11030
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11030
old locus tag: MSROBK_P00140
so part of: sequence
location: 7975..8307
location: region:7975-8307:1
so has part: feature:7975-8307:1:exon
subclass of: SO_0000010

position:7975:1
position: 7975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8307:1
position: 8307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7975-8307:1:exon

MSROBK_RS11030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11030
old locus tag: MSROBK_P00140
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MRRASYIDTKIDLNHQQEKVKKLKKLLQKTEMEWQNNWFNNLTGDKQEQYKKQVAEMKRITPSILWTIETGKIQVEWKRNWFKNLTEDKKEKYYTEINKIKTEIKKENNL
SIO_010081: MSROBK_RS11030
subclass of: SO_0000673
so part of: MSROBK_RS11030
location: 7975..8307
location: region:7975-8307:1
so has part: feature:7975-8307:1:exon

WP_105629063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7975-8307:1:exon

MSROBK_RS11035
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11035
old locus tag: MSROBK_P00150
so part of: sequence
location: 8434..9090
location: region:8434-9090:1
so has part: feature:8434-9090:1:exon
subclass of: SO_0000010

position:8434:1
position: 8434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9090:1
position: 9090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8434-9090:1:exon

MSROBK_RS11035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11035
old locus tag: MSROBK_P00150
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MQELILQAEQINYHFVEINGLNYKVINQLDEKKHVSNFYLPKKCARQHPTCKDSYKVKIYDKFICVPKIMCFIDKTGKYFLVGIDMFFTYWIYNTRDNNKYRLAGYQAIRDTAIKELHYLTVSARRYEKEQATNPFLSGLTYQQAREQICAESDKLKAEYQTYVKTKYSANKNIKNETRENNSLVDDYNTHYEKNKGDPPKMSEEELEQLLVELDNLD
SIO_010081: MSROBK_RS11035
subclass of: SO_0000673
so part of: MSROBK_RS11035
location: 8434..9090
location: region:8434-9090:1
so has part: feature:8434-9090:1:exon

WP_105629064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8434-9090:1:exon

MSROBK_RS11040
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11040
old locus tag: MSROBK_P00160
so part of: sequence
location: 9697..10068
location: region:9697-10068:1
so has part: feature:9697-10068:1:exon
subclass of: SO_0000010

position:9697:1
position: 9697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10068:1
position: 10068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9697-10068:1:exon

MSROBK_RS11040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11040
old locus tag: MSROBK_P00160
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MRIIPYELYKYTPNLSLMALRKEFGMYDYCLNMNKTNIAMQPFLNLGRNYFDLSFQKWFIEMKKRKNYVNSFHKFYAEKNKFSPIKTDFFLLLECCLQWDLKEFMPYNINLSWYEIILKFFKQ
SIO_010081: MSROBK_RS11040
subclass of: SO_0000673
so part of: MSROBK_RS11040
location: 9697..10068
location: region:9697-10068:1
so has part: feature:9697-10068:1:exon

WP_105629065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9697-10068:1:exon

MSROBK_RS11045
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11045
so part of: sequence
location: complement(10230..11065)
location: region:10230-11065:-1
so has part: feature:10230-11065:-1:exon
subclass of: SO_0000010

position:10230:-1
position: 10230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11065:-1
position: 11065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10230-11065:-1:exon

MSROBK_RS11045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611288.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: IS5 family transposase
translation: MNNNKFNTLNNREWLRLTGIKKSTFNKMLDILKVAEIEKFKKGGKTNKLSLENRLLMTLLYWREYQTYFHLGKSFDISEANCYRNIKWIEDILIKNSDFQQLAGKKALINDYFNDKTIIIDATETPIQRPKKGQKQSYSGKKKKHTIKTQVIIEQETKKIIATSFSLGKKHDYALFKESKIPILKNTKLIVDSGYQGIQKNHNNVLIPTKKTKKNPLNKEQKQYNRLVSKMRIIIENIFAILKKFKIITEKYRNRRKRFGLRFNLIASIYNLQLLYLT
SIO_010081: MSROBK_RS11045
subclass of: SO_0000673
so part of: MSROBK_RS11045
location: complement(join(10230..10669,10669..11065))
location: region:10230-11065:-1
so has part: feature:10669-11065:-1:exon
so has part: feature:10230-10669:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10669-11065:-1:exon

position:10669:-1
position: 10669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10230-10669:-1:exon

MSROBK_RS11050
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11050
old locus tag: MSROBK_P00190
so part of: sequence
location: 11869..12201
location: region:11869-12201:1
so has part: feature:11869-12201:1:exon
subclass of: SO_0000010

position:11869:1
position: 11869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12201:1
position: 12201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11869-12201:1:exon

MSROBK_RS11050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11050
old locus tag: MSROBK_P00190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MRRASYIDTKIDLNHQQEKVKKLKKLLQKTEMEWQNNWFNNLTGDKQEQYKKQVAEMKRITPSILWTIETGKIQVEWKRNWFKNLTEDKKEKYYTEINKIKTEIKKENNL
SIO_010081: MSROBK_RS11050
subclass of: SO_0000673
so part of: MSROBK_RS11050
location: 11869..12201
location: region:11869-12201:1
so has part: feature:11869-12201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11869-12201:1:exon

MSROBK_RS11055
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11055
old locus tag: MSROBK_P00200
so part of: sequence
location: 12328..12984
location: region:12328-12984:1
so has part: feature:12328-12984:1:exon
subclass of: SO_0000010

position:12328:1
position: 12328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12984:1
position: 12984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12328-12984:1:exon

MSROBK_RS11055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11055
old locus tag: MSROBK_P00200
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MQELILQAEQINYHFVEINGLNYKVINQLDEKKHVSNFYLPKKCARQHPTCKDSYKVKIYDKFICVPKIMCFIDKTGKYFLVGIDMFFTYWIYNTRDNNKYRLAGYQAIRDTAIKELHYLTVSARRYEKEQATNPFLSGLTYQQAREQICAESDKLKAEYQTYVKTKYSANKNIKNETRENNSLVDDYNTHYEKNKGDPPKMSEEELEQLLVELDNLD
SIO_010081: MSROBK_RS11055
subclass of: SO_0000673
so part of: MSROBK_RS11055
location: 12328..12984
location: region:12328-12984:1
so has part: feature:12328-12984:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12328-12984:1:exon

MSROBK_RS11060
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11060
old locus tag: MSROBK_P00210
so part of: sequence
location: 13591..13962
location: region:13591-13962:1
so has part: feature:13591-13962:1:exon
subclass of: SO_0000010

position:13591:1
position: 13591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13962:1
position: 13962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13591-13962:1:exon

MSROBK_RS11060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11060
old locus tag: MSROBK_P00210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MRIIPYELYKYTPNLSLMALRKEFGMYDYCLNMNKTNIAMQPFLNLGRNYFDLSFQKWFIEMKKRKNYVNSFHKFYAEKNKFSPIKTDFFLLLECCLQWDLKEFMPYNINLSWYEIILKFFKQ
SIO_010081: MSROBK_RS11060
subclass of: SO_0000673
so part of: MSROBK_RS11060
location: 13591..13962
location: region:13591-13962:1
so has part: feature:13591-13962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13591-13962:1:exon

MSROBK_RS11065
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11065
so part of: sequence
location: complement(14124..14959)
location: region:14124-14959:-1
so has part: feature:14124-14959:-1:exon
subclass of: SO_0000010

position:14124:-1
position: 14124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14959:-1
position: 14959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14124-14959:-1:exon

MSROBK_RS11065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611288.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: IS5 family transposase
translation: MNNNKFNTLNDREWLRLTGIKKSTFNKMLDILKVVEIEKFKKGGKTNKLSLENRLLMTLLYWREYQTYFHLGKSFDISGANCYRNIKWIEDILIKNSDFQQLAGKKALINDYFNDKTIIIDATETPIQRPKKGQKQSYSGKKKKHTIKTQVIIEQETKKIIATSFSLGKKHDYALFKESKIPILKNTKLIVDSGYQGIQKNHNNVLIPTKKTKKNPLNKEQKQYNRLVSKMRIIIENIFAILKKFKIITEKYRNRRKRFGLRFNLIASIYNLQLLYLT
SIO_010081: MSROBK_RS11065
subclass of: SO_0000673
so part of: MSROBK_RS11065
location: complement(join(14124..14563,14563..14959))
location: region:14124-14959:-1
so has part: feature:14563-14959:-1:exon
so has part: feature:14124-14563:-1:exon

WP_105629075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14563-14959:-1:exon

position:14563:-1
position: 14563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14124-14563:-1:exon

MSROBK_RS11070
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11070
old locus tag: MSROBK_P00240
so part of: sequence
location: complement(15066..15404)
location: region:15066-15404:-1
so has part: feature:15066-15404:-1:exon
subclass of: SO_0000010

position:15066:-1
position: 15066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15404:-1
position: 15404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15066-15404:-1:exon

MSROBK_RS11070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11070
old locus tag: MSROBK_P00240
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MEQKQNEWITVNIMARRKLKRETEKANLFSIPEHKGLSVWISKKCIHGSRSGKSLAVGIKANDEYIIWLYDNDAKIYVKSEIWQGKHLINLYQKEWNKILAAIKINQETLNK
SIO_010081: MSROBK_RS11070
subclass of: SO_0000673
so part of: MSROBK_RS11070
location: complement(15066..15404)
location: region:15066-15404:-1
so has part: feature:15066-15404:-1:exon

WP_105629076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15066-15404:-1:exon

MSROBK_RS11075
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11075
old locus tag: MSROBK_P00250
so part of: sequence
location: complement(15408..16823)
location: region:15408-16823:-1
so has part: feature:15408-16823:-1:exon
subclass of: SO_0000010

position:15408:-1
position: 15408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16823:-1
position: 16823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15408-16823:-1:exon

MSROBK_RS11075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11075
old locus tag: MSROBK_P00250
inference: COORDINATES: protein motif:HMM:NF040179.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: DUF87 domain-containing protein
translation: MVSIVFTCFADSKTDLDQVVSNLKNEMIRNRFTINDLTFRQFATYKCLLFKNNDKLKNIEQEMATITLASAWPFPSKPLNDPQGLIMGENEQIQPIIFDIKTKSSIRASHNAFIVGQMGFGKTFNVKKQLNWLYCNSTKIYIIDPQREYGSFANYHGGEIIEFGNNPKAKINPLEIFTDNFAEHISFLEQWFKNLYSDLTNIELAKLQEYIIQLYKNFKITADTNLSQLTRKDYPILTDLYNLVNKKEQHNLLEKMLWKLTKGADGTLFNGASTLEIKSDLIVFDIYNMAKSKTIANAQMYLLLALLDRVMKKNKEDNLNLPPEQQSWICIAVDEAHLLINQDNMLALNYLFTLSKTCRKFNGILYILTQSIGDFTQHSEEVKRQARGIIEQCTYQFIHHLNSIGLQNYTELLTDNNMINAYEKNVILTPKKGLCFFSINDKRYILQVIATSEEIKAIGTQEDINNLGKET
SIO_010081: MSROBK_RS11075
subclass of: SO_0000673
so part of: MSROBK_RS11075
location: complement(15408..16823)
location: region:15408-16823:-1
so has part: feature:15408-16823:-1:exon

WP_105629077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15408-16823:-1:exon

MSROBK_RS11080
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11080
old locus tag: MSROBK_P00260
so part of: sequence
location: 16937..17389
location: region:16937-17389:1
so has part: feature:16937-17389:1:exon
subclass of: SO_0000010

position:16937:1
position: 16937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17389:1
position: 17389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16937-17389:1:exon

MSROBK_RS11080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11080
old locus tag: MSROBK_P00260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: IS5 family transposase
translation: MNNNKFNTLNDREWLRLTGIKKSTFNKMLDILKVVEIEKFKKGGKTNKLSLENRLLMTLLYWREYQTYFHLGKSFDISEANCYRNIKWIEDILIKNSDFQQLAGKKALINDYFNDKTIIIDATETPIQRPKKDKNNLILVKRKNTRSKHK
SIO_010081: MSROBK_RS11080
subclass of: SO_0000673
so part of: MSROBK_RS11080
location: 16937..17389
location: region:16937-17389:1
so has part: feature:16937-17389:1:exon

WP_040093163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16937-17389:1:exon

MSROBK_RS11085
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11085
so part of: sequence
location: 17374..17742
location: region:17374-17742:1
so has part: feature:17374-17742:1:exon
subclass of: SO_0000010

position:17374:1
position: 17374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17742:1
position: 17742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17374-17742:1:exon

MSROBK_RS11085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11085
inference: COORDINATES: protein motif:HMM:NF024752.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: transposase family protein
translation: MKTQVIIEQETKKIIATSFSLGKKHDYALFKESKIPILKNTKLIVDSGYQWIQKNHNNVLIPTKKTKKNPLNKEQKQYNRLVSKMRIIIENIFAILKKFKIITENLVKITISPIISQWQYNQ
SIO_010081: MSROBK_RS11085
subclass of: SO_0000673
so part of: MSROBK_RS11085
location: 17374..17742
location: region:17374-17742:1
so has part: feature:17374-17742:1:exon

WP_242441502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17374-17742:1:exon

MSROBK_RS11090
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11090
old locus tag: MSROBK_P00280
so part of: sequence
location: complement(17899..18168)
location: region:17899-18168:-1
so has part: feature:17899-18168:-1:exon
subclass of: SO_0000010

position:17899:-1
position: 17899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18168:-1
position: 18168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17899-18168:-1:exon

MSROBK_RS11090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11090
old locus tag: MSROBK_P00280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004028771.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MMTLLATSGVNDLLNKILGITMPVLIAIAVVSAIIMIGVYAIGGKFNADSANRKETIKKVMWVLICLLIVILASAIVLAFKDTIAPITS
SIO_010081: MSROBK_RS11090
subclass of: SO_0000673
so part of: MSROBK_RS11090
location: complement(17899..18168)
location: region:17899-18168:-1
so has part: feature:17899-18168:-1:exon

WP_105629078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17899-18168:-1:exon

MSROBK_RS11095
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11095
old locus tag: MSROBK_P00290
so part of: sequence
location: complement(18238..20304)
location: region:18238-20304:-1
so has part: feature:18238-20304:-1:exon
subclass of: SO_0000010

position:18238:-1
position: 18238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20304:-1
position: 20304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18238-20304:-1:exon

MSROBK_RS11095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11095
old locus tag: MSROBK_P00290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004028772.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKLLSILTISTLTTSVPAPLIANTVQTCVKRDVSALTSNANNDYLPLNKINGINEATAIAVDSSNNIYFAINKVSFVLKQGETTPTKINDIIGIIDSIVVDKNNNVYFGTSDGLFVLKHGETTPTKINGVSYALAIAVDSKDNIYLGVDKGAYVLKQGETTPTKINGIDKSVVSITADNNDNVYFSLFSDYVYKLAAGSTTPTKIDGIDFAAISIAVDSSNNIYLGVDKGAYVLKHGETIPTKINGVNGRVKTAVDSKDNIYLGTDNGVFKLQSVLSWVKTNINVNLVDKSKNIAWLRDDQLVANGQVKVKMENTNIKTVKVNGKEMSQTNKVWEFDLPTDSTTVENKDYKIEVVFTLDKKSYVGQIIVSSFLSQPSINVKKNTSVIGNVDSYVYQLPTNGKVGDITLTSDLYYSDTEVNVSLNKPTSSTNITAQIFGLDEKWEKNRKVFQIFDNQTYNLDGSQLDTYQGRYLIETEDNATNKSSYYVVINKDNLTPNFWDTDQGQYFYSWANLNGYNESIKKLNATELNKIINESKNWQQLASDSQFATVVADWFKTNGKLFSKAPLTKEQVVAQLKTQIPNSIKIPAVNTSNYDINKVSFVLNQSDFKPNDKVNITVKYNNATAEQFTLQIKDSSTPDKKGGDSKLWIIGVVVGVLAGLGLAYWLFKRFVFDKYFLPKIKKKPPR
SIO_010081: MSROBK_RS11095
subclass of: SO_0000673
so part of: MSROBK_RS11095
location: complement(18238..20304)
location: region:18238-20304:-1
so has part: feature:18238-20304:-1:exon

WP_105629079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18238-20304:-1:exon

MSROBK_RS11100
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11100
old locus tag: MSROBK_P00300
so part of: sequence
location: complement(20726..20977)
location: region:20726-20977:-1
so has part: feature:20726-20977:-1:exon
subclass of: SO_0000010

position:20726:-1
position: 20726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20977:-1
position: 20977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20726-20977:-1:exon

MSROBK_RS11100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11100
old locus tag: MSROBK_P00300
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKVKKCEINNCNKNMVSLVVVGVPPFCEYHNGKFFEYSANNFLNLKPNSLKNMEKNKDFRQVFILEQINNFKKLYENKDKKE
SIO_010081: MSROBK_RS11100
subclass of: SO_0000673
so part of: MSROBK_RS11100
location: complement(20726..20977)
location: region:20726-20977:-1
so has part: feature:20726-20977:-1:exon

WP_105629080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20726-20977:-1:exon

MSROBK_RS11105
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11105
old locus tag: MSROBK_P00310
so part of: sequence
location: complement(20980..21756)
location: region:20980-21756:-1
so has part: feature:20980-21756:-1:exon
subclass of: SO_0000010

position:20980:-1
position: 20980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21756:-1
position: 21756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20980-21756:-1:exon

MSROBK_RS11105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11105
old locus tag: MSROBK_P00310
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: ParA family protein
translation: MKMISFAVKKGGAGKTTLCKNVAYKLALDEVKVLLIDLDPQATLTLNLVNNVYHKNKTIKSVLTEPELIKIAQIIQETKYKNIDIIVGGEQLNKVSAILNLNYSNEKDQHLIADTLYMQNDKTFDSYDYVLIDYPPTINELSVSFLMLSDLIIAPLTDDGGCYKGVLDLKNTLNYIAKIINKEPPNIKILLNNVKNNDVTETIWEWLKNDNLTQYLLKCEIKHSDTFSKNTVKLDTIWTNPTYWRQKQAYEELIKEIK
SIO_010081: MSROBK_RS11105
subclass of: SO_0000673
so part of: MSROBK_RS11105
location: complement(20980..21756)
location: region:20980-21756:-1
so has part: feature:20980-21756:-1:exon

WP_105629081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20980-21756:-1:exon

MSROBK_RS11110
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11110
old locus tag: MSROBK_P00320
so part of: sequence
location: complement(21743..22000)
location: region:21743-22000:-1
so has part: feature:21743-22000:-1:exon
subclass of: SO_0000010

position:21743:-1
position: 21743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22000:-1
position: 22000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21743-22000:-1:exon

MSROBK_RS11110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11110
old locus tag: MSROBK_P00320
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MPNIDKEKTNITKNLINKTSSFSDVKEFKKLDNSTFMPRMKCNSRVVMAFRNEAKSKKWQLTTLMNEILVERYNIDLEDSNNEDD
SIO_010081: MSROBK_RS11110
subclass of: SO_0000673
so part of: MSROBK_RS11110
location: complement(21743..22000)
location: region:21743-22000:-1
so has part: feature:21743-22000:-1:exon

WP_109244157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21743-22000:-1:exon

MSROBK_RS11115
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11115
old locus tag: MSROBK_P00330
so part of: sequence
location: complement(22680..23270)
location: region:22680-23270:-1
so has part: feature:22680-23270:-1:exon
subclass of: SO_0000010

position:22680:-1
position: 22680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23270:-1
position: 23270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22680-23270:-1:exon

MSROBK_RS11115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11115
old locus tag: MSROBK_P00330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MGELEKILIMINRWGYLNTEQVALLTQKSFISAKRILERNIKKGFYKIDQHTRKNIYYLSHKGNTFVGREHKKAIKINCYEMPHQDMLIKWLVAQSDIENYQTERELKMENGNLNAYPDLIVYKNDGTIQLVEFERTRKIPERFRKKLDGLRKYYKDNYQVHWITPTQTLANWIENQINNYAWQELNTYEIWNKKE
SIO_010081: MSROBK_RS11115
subclass of: SO_0000673
so part of: MSROBK_RS11115
location: complement(22680..23270)
location: region:22680-23270:-1
so has part: feature:22680-23270:-1:exon

WP_109244156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22680-23270:-1:exon

MSROBK_RS11120
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11120
old locus tag: MSROBK_P00340
so part of: sequence
location: complement(23311..23853)
location: region:23311-23853:-1
so has part: feature:23311-23853:-1:exon
subclass of: SO_0000010

position:23311:-1
position: 23311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23853:-1
position: 23853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23311-23853:-1:exon

MSROBK_RS11120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11120
old locus tag: MSROBK_P00340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012504399.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MRIIPYELYKYTPNLSLMALRKEFGMYDYCLNMNKTNIAMQPFLNLGRNYFDLSFQKWFIEMKKRKNYVNSFHKFYAEKNKFSPIKTDFFLLLECCLQWDLKEFTPYNINLSWYEIILKFFKQYKIREYYFDNEKYQNLLYWYKNKFMSLNKTGKIKPKQLNMIEVIDFCKSTLLFNLEK
SIO_010081: MSROBK_RS11120
subclass of: SO_0000673
so part of: MSROBK_RS11120
location: complement(23311..23853)
location: region:23311-23853:-1
so has part: feature:23311-23853:-1:exon

WP_105629083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23311-23853:-1:exon

MSROBK_RS11125
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11125
so part of: sequence
location: 24266..25101
location: region:24266-25101:1
so has part: feature:24266-25101:1:exon
subclass of: SO_0000010

position:24266:1
position: 24266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25101:1
position: 25101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24266-25101:1:exon

MSROBK_RS11125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611288.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: IS5 family transposase
translation: MNNNKFNTLNDREWLRLTGIKKSTFNKMLDILKVAEIEKFKKGGKTNKLSLENRLLMTLLYWREYQTYFHLGKSFDISGANCYRNIKWIEDILIKNSDFQQLAGKKALINDYFNDKTIIIDATETPIQRPKKGQKQSYSGKKKKHTIKTQVIIEQETKKIIATSFSLGKKHDYALFKESKIPILKNTKLIVDSGYQGIQKNHNNVLIPTKKTKKNPLNKEQKQYNILVSKMRIIIENIFAILKKFKIITEKYRNRRKRFGLRFNLIASIYNLQLLYLT
SIO_010081: MSROBK_RS11125
subclass of: SO_0000673
so part of: MSROBK_RS11125
location: join(24266..24662,24662..25101)
location: region:24266-25101:1
so has part: feature:24266-24662:1:exon
so has part: feature:24662-25101:1:exon

WP_109244154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24266-24662:1:exon

position:24662:1
position: 24662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24662-25101:1:exon

MSROBK_RS11130
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11130
old locus tag: MSROBK_P00370
so part of: sequence
location: complement(25530..26186)
location: region:25530-26186:-1
so has part: feature:25530-26186:-1:exon
subclass of: SO_0000010

position:25530:-1
position: 25530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26186:-1
position: 26186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25530-26186:-1:exon

MSROBK_RS11130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11130
old locus tag: MSROBK_P00370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MQELILQAEQINYHFVEINGLNYKVINQLDEKKHVSNFYLPKKCARQHPTCKDSYKVKIYDKFICVPKIMCFIDKTGKYFLVGIDMFFTYWIYNTRDNNKYRLAGYQAIRDTAIKELHYLTVSARRYEKEQATNPFLSGLTYQQAREQICAESDKLKAEYQTYVKTKYSANKNIKNETRENNSLVDDYNTHYEKNKGDPPKMSEEELEQLLVELDNLD
SIO_010081: MSROBK_RS11130
subclass of: SO_0000673
so part of: MSROBK_RS11130
location: complement(25530..26186)
location: region:25530-26186:-1
so has part: feature:25530-26186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25530-26186:-1:exon

MSROBK_RS11135
type: Gene
subclass of: SO_0000704
RO_0002162: 2138
locus tag: MSROBK_RS11135
old locus tag: MSROBK_P00380
so part of: sequence
location: complement(26313..26645)
location: region:26313-26645:-1
so has part: feature:26313-26645:-1:exon
subclass of: SO_0000010

position:26313:-1
position: 26313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26645:-1
position: 26645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26313-26645:-1:exon

MSROBK_RS11135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2138
locus tag: MSROBK_RS11135
old locus tag: MSROBK_P00380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MRRASYIDTKIDLNHQQEKVKKLKKLLQKTEMEWQNNWFNNLTGDKQEQYKKQVAEMKRITPSILWTIETGKIQVEWKRNWFKNLTEDKKEKYYTEINKIKTEIKKENNL
SIO_010081: MSROBK_RS11135
subclass of: SO_0000673
so part of: MSROBK_RS11135
location: complement(26313..26645)
location: region:26313-26645:-1
so has part: feature:26313-26645:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26313-26645:-1:exon