Spiroplasma melliferum strain microbial plasmid psm2, complete sequence.
type: Entry
definition: Spiroplasma melliferum strain microbial plasmid psm2, complete sequence.
sequence version: NZ_CP029201.1
sequence date: 2023-03-28
sequence: sequence
division: CON
label: NZ_CP029201.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN08579952
keyword: RefSeq
source: Spiroplasma melliferum
organism: Spiroplasma melliferum
taxonomy: Bacteria; Mycoplasmatota; Mollicutes; Entomoplasmatales; Spiroplasmataceae; Spiroplasma.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP029201.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. smrtanalysis_2.3.0.140936\nExpected Final Version :: yes\nGenome Coverage :: 428.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/28/2023 01:22:37\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,469\nCDSs (total) :: 1,431\nGenes (coding) :: 1,418\nCDSs (with protein) :: 1,418\nGenes (RNA) :: 38\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 13\nCDSs (without protein) :: 13\nPseudo Genes (ambiguous residues) :: 0 of 13\nPseudo Genes (frameshifted) :: 2 of 13\nPseudo Genes (incomplete) :: 10 of 13\nPseudo Genes (internal stop) :: 4 of 13\nPseudo Genes (multiple problems) :: 3 of 13\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 34281
topology: circular
so has quality: SO_0000988
location: 1..34281
location: region:1-34281:1
RO_0002162: 2134

NZ_CP029201
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN08579952
type: BioSample
SIO_000068: biosample

1
title: Compelete Genome Sequence of Spiroplasma melliferum
author: Davis, R.E.
author: Shao, J.Y.
author: Zhao, Y.
author: Gasparich, G.E.
journal: Unpublished

2
title: Direct Submission
author: Davis, R.E.
author: Shao, J.Y.
author: Zhao, Y.
author: Gasparich, G.E.
journal: Submitted (02-MAY-2018) United States Department of Agriculture, Beltsville Agricultural Research Center, 10300 Baltimore Ave., Beltsville, MD 20705, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34281:1
position: 34281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-34281:1:source
so part of: sequence
organism: Spiroplasma melliferum
mol type: genomic DNA
strain: microbial
isolation source: diseased honeybee
host: Apis mellifera
culture collection: ATCC:29416
plasmid: psm2
country: USA
collection date: 1976-05

2134
type: Taxonomy
SIO_000068: taxonomy

SRED_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00310
so part of: sequence
location: join(34143..34281,1..8)
location: region:1-34281:1
so has part: feature:34143-34281:1:exon
so has part: feature:1-8:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:34143-34281:1:exon

position:34143:1
position: 34143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-8:1:exon

position:8:1
position: 8
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRED_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MENGNLNAYPDLIITKNDDSEIYVEFERTQKSPSRFKKKLDGHTKWFV
SIO_010081: SRED_RS00310
subclass of: SO_0000673
so part of: SRED_RS00310
location: join(34143..34281,1..8)
location: region:1-34281:1
so has part: feature:34143-34281:1:exon
so has part: feature:1-8:1:exon

WP_168175921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34143-34281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-8:1:exon

SRED_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00315
old locus tag: SRED_003085
so part of: sequence
location: 115..450
location: region:115-450:1
so has part: feature:115-450:1:exon
subclass of: SO_0000010

position:115:1
position: 115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450:1
position: 450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115-450:1:exon

SRED_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00315
old locus tag: SRED_003085
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: METKQNEWITVNILARRKLKRETEKAVLFSIPKHKGLSVWINKKCIHALRNGKVFAVGVKKNDEYTIWTYDPDSKQHLKSEIWQGQHLINLYQNEFKKIVAWLNKQQSLNK
SIO_010081: SRED_RS00315
subclass of: SO_0000673
so part of: SRED_RS00315
location: 115..450
location: region:115-450:1
so has part: feature:115-450:1:exon

WP_004028768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115-450:1:exon

SRED_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00320
old locus tag: SRED_003086
so part of: sequence
location: 548..2062
location: region:548-2062:1
so has part: feature:548-2062:1:exon
subclass of: SO_0000010

position:548:1
position: 548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2062:1
position: 2062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548-2062:1:exon

SRED_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00320
old locus tag: SRED_003086
inference: COORDINATES: protein motif:HMM:NF014044.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: type IV secretion system DNA-binding domain-containing protein
translation: MWKKIKNWRDKNISNKIFYWFIFILVIPFMLVCLINCASAIIIMFLKYHTLDFKNFYIAYADKYSWLISIVLFIIAFLFFLWFYVSHKIDNMDSPKTKQQKSNKASDKEFKTLQLKMLALNNRYGIPKNNLTQHTLLVGTTGSGKTTTLMFLVKQLTQIFKQTTIIIDGKGDIDLINKVKQLDPSAFVWEIGGTTEYNPFATKDSVVLSDKIMSLFDFSEPHYEALVNDYVLILTETLINKNIDLTLENIIKYFDISELKQLISKKNSNYEYLEKINEDDILGMRSRLNVYRQQLKISIGINNNLLELITKHKTILFSINSLMYPKLAGSVGKIIIQDLKELTTLKSVNQKINIVLDEFNVFASETIVNLINKSRSFNYQCFLSFQTINDLKTNNMNLTDTIFGNVSTIVCHNIKDPNTAEYVASVFGTQETEKLTRQLDFKNNTADMGSVRAVDEFIVHPNDLKTLKIGECYFKTTLSSGKLFIKKIAVDPTCLDGLIQHLNK
SIO_010081: SRED_RS00320
subclass of: SO_0000673
so part of: SRED_RS00320
location: 548..2062
location: region:548-2062:1
so has part: feature:548-2062:1:exon

WP_040584489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548-2062:1:exon

SRED_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00325
old locus tag: SRED_003087
so part of: sequence
location: 2719..3141
location: region:2719-3141:1
so has part: feature:2719-3141:1:exon
subclass of: SO_0000010

position:2719:1
position: 2719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141:1
position: 3141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2719-3141:1:exon

SRED_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00325
old locus tag: SRED_003087
inference: COORDINATES: protein motif:HMM:NF012651.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: single-stranded DNA-binding protein
translation: MNQFIGIGRTTKDIEIKQTSTGKEYAIFQLAIARPYSTQKETDFIPCQVWNKQAVVLQKYCQKGSQIAITGILQSFKNKEDKTQWIVQVSNYEFLHTNNDLKKDILLSEKSNEIIAEEQANYSSEDIKELFNGDDAILWD
SIO_010081: SRED_RS00325
subclass of: SO_0000673
so part of: SRED_RS00325
location: 2719..3141
location: region:2719-3141:1
so has part: feature:2719-3141:1:exon

WP_051600851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2719-3141:1:exon

SRED_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00330
old locus tag: SRED_003088
so part of: sequence
location: 3284..3937
location: region:3284-3937:1
so has part: feature:3284-3937:1:exon
subclass of: SO_0000010

position:3284:1
position: 3284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3937:1
position: 3937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3284-3937:1:exon

SRED_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00330
old locus tag: SRED_003088
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MQQLQKEEQVNYHFVEINGLNYKVINQLDEKKHVSNFYLPKKLVRQHPTRKDSYKVKIYDKFICVPKIMCFIDKTGKYFLVGIDMFFTYWIYNTRDNNKYRLAGYQAIKDTAIKELHYLTVSARRYEKEQATNPFLSGLTYQQAREQICAESDKLKAEYQTYVQSKYSANNIKKSSNRENNSLIDKFNTHYEKNKGDPPKLSEEELDQLLVELDNLD
SIO_010081: SRED_RS00330
subclass of: SO_0000673
so part of: SRED_RS00330
location: 3284..3937
location: region:3284-3937:1
so has part: feature:3284-3937:1:exon

WP_040584491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3284-3937:1:exon

SRED_RS07100
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS07100
so part of: sequence
location: 4892..5041
location: region:4892-5041:1
so has part: feature:4892-5041:1:exon
subclass of: SO_0000010

position:4892:1
position: 4892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5041:1
position: 5041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4892-5041:1:exon

SRED_RS07100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS07100
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MTESLKILDLLNKWGYLTAEQIALLLNKPIESAKTNLKTLQKKTTLQNR
SIO_010081: SRED_RS07100
subclass of: SO_0000673
so part of: SRED_RS07100
location: 4892..5041
location: region:4892-5041:1
so has part: feature:4892-5041:1:exon

WP_168175918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4892-5041:1:exon

SRED_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00335
old locus tag: SRED_003089
so part of: sequence
location: 5219..5485
location: region:5219-5485:1
so has part: feature:5219-5485:1:exon
subclass of: SO_0000010

position:5219:1
position: 5219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5485:1
position: 5485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5219-5485:1:exon

SRED_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00335
old locus tag: SRED_003089
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MENGNLNAYPDLIITKNDDSEIYVEFERTQKSPSRFKKKLDGHTKWLRNGGQIYWITPTQTLANWIQRQIDKDDFKIELQQVIIWSTQ
SIO_010081: SRED_RS00335
subclass of: SO_0000673
so part of: SRED_RS00335
location: 5219..5485
location: region:5219-5485:1
so has part: feature:5219-5485:1:exon

WP_168175919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5219-5485:1:exon

SRED_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00340
old locus tag: SRED_003090
so part of: sequence
location: 5748..6059
location: region:5748-6059:1
so has part: feature:5748-6059:1:exon
subclass of: SO_0000010

position:5748:1
position: 5748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6059:1
position: 6059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5748-6059:1:exon

SRED_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00340
old locus tag: SRED_003090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004028781.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MFDLNWSAVISLKYEDDEFYLLWQYYRNGKNKITEKQKDYIKNLFYQYYIPNTERQFEYLENKLNELNTRSASAIINGLLQKDKRLIALLVKYLEQFKPNNLT
SIO_010081: SRED_RS00340
subclass of: SO_0000673
so part of: SRED_RS00340
location: 5748..6059
location: region:5748-6059:1
so has part: feature:5748-6059:1:exon

WP_004028781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5748-6059:1:exon

SRED_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00345
old locus tag: SRED_003091
so part of: sequence
location: 6303..7085
location: region:6303-7085:1
so has part: feature:6303-7085:1:exon
subclass of: SO_0000010

position:6303:1
position: 6303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7085:1
position: 7085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6303-7085:1:exon

SRED_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00345
old locus tag: SRED_003091
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: ParA family protein
translation: MKKITFANSKGGVGKTTLTINVAQLLSQIGKKVLLFDFDPQSNLTNTLLENPIDTNNITKWILGADKDDLISTILETRISNIFLVPSYSKMVLETNNIVLNQPNSEFKFKMNLEEIEKILINKFDYIFFDTYPSMNTILLNVLLASDEIIVPIEPHSYSFEGITTMFKPYLETINNSKKMGMNIKNNINYYVLNKIQKNKLHQSVFELISQNEIGKKLLDTHIPLSATKQKETMLLKFAAITNNNPIYKLVMELTNKGVI
SIO_010081: SRED_RS00345
subclass of: SO_0000673
so part of: SRED_RS00345
location: 6303..7085
location: region:6303-7085:1
so has part: feature:6303-7085:1:exon

WP_004028782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6303-7085:1:exon

SRED_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00350
old locus tag: SRED_003092
so part of: sequence
location: 7088..7360
location: region:7088-7360:1
so has part: feature:7088-7360:1:exon
subclass of: SO_0000010

position:7088:1
position: 7088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7360:1
position: 7360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7088-7360:1:exon

SRED_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00350
old locus tag: SRED_003092
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MNNKLLASLKNKIDSSASQIPKEESFNEIKKEIIYSEIKDETKIVRKNISITLKQQKMINEMSKNNYEINLSSIARREIEKIYNEFKLKK
SIO_010081: SRED_RS00350
subclass of: SO_0000673
so part of: SRED_RS00350
location: 7088..7360
location: region:7088-7360:1
so has part: feature:7088-7360:1:exon

WP_004028783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7088-7360:1:exon

SRED_RS07105
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS07105
old locus tag: SRED_003093
so part of: sequence
location: 7423..7575
location: region:7423-7575:1
so has part: feature:7423-7575:1:exon
subclass of: SO_0000010

position:7423:1
position: 7423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7575:1
position: 7575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7423-7575:1:exon

SRED_RS07105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS07105
old locus tag: SRED_003093
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004028791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKADNKDTINHNLMIVDVDLQKCLNCSFITQKIDDEWFTINTGDKNCGK
SIO_010081: SRED_RS07105
subclass of: SO_0000673
so part of: SRED_RS07105
location: 7423..7575
location: region:7423-7575:1
so has part: feature:7423-7575:1:exon

WP_004028784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7423-7575:1:exon

SRED_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00355
old locus tag: SRED_003094
so part of: sequence
location: 7872..10223
location: region:7872-10223:1
so has part: feature:7872-10223:1:exon
subclass of: SO_0000010

position:7872:1
position: 7872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10223:1
position: 10223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7872-10223:1:exon

SRED_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00355
old locus tag: SRED_003094
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004028785.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: DUF3688 family protein
translation: MKKLLSILTITTLTASVPAPLLANTPLTRNKRDVGTTAKDVTNNYWTFIASISKEDATKNKDKYYFVIYKNKGESNWQIYKMQMGKPNDRPIFGETVESHKAFYRWDGVGEPNLPEINSLTGEIINWKGFDIKIKEKYGKENIVVWNGINARGDNNFYFIIWRGRKSDKWEIVKYKNIGLNTSNTIIATSKTGAELDRVSHNFSFSNGSEWADAKNDDGTYFKSVYRWDGVGEPNLPEINPNTGNITNWKQPTKNDFQQGILFSLVDGSKTATWSNNGMRLTVDGETNININNPNVTEVYWDGSLQPQLSKQWKINVKPETAPRDHKLVIKYNINGTKYTSEDIMVSMLAKIDSTPTPVQQNLSDLIKNTDLGNIIDNNDDTIFLAVNKANSEIIDDFSQIEITKKVNHSATLSAKPDSKSYKGSVDIKYNVVPATVVDLKIELKPTVSSAIVNKDYLAQLDSSKMTNKVDTFYYANSESVITMVKPTDSSVITGVVYGCDDKWNKTSQSSNIDPAKGIKLDGSQLGAVQGRYLIDLKNELGQTNTIYLQIHSEKDEKAKAYWNTDNGKQFEQWAQDQEQGYENIRGSSASQLNNLFELSKTWKQSLKHLDLKLDNFVVDNIKNVSQDEIDNYKTKLLASVKAQVEKYVPGVVEKTDYVISVDNLVAGDWTTSKDVKVQAVDGSTKLLSFTVKTIPVQQKEEVTALASTPVSSDKGGKSIWKILGIVAGSLAGLGLAYWLFKRFVFNKYFLPKIKRRRHLKLVEQVRKEEAEKDAQNNKGGEE
SIO_010081: SRED_RS00355
subclass of: SO_0000673
so part of: SRED_RS00355
location: 7872..10223
location: region:7872-10223:1
so has part: feature:7872-10223:1:exon

WP_040584494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7872-10223:1:exon

SRED_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00360
old locus tag: SRED_003095
so part of: sequence
location: 10223..10492
location: region:10223-10492:1
so has part: feature:10223-10492:1:exon
subclass of: SO_0000010

position:10492:1
position: 10492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10223-10492:1:exon

SRED_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00360
old locus tag: SRED_003095
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MMTLLATSGVDDLLNKILGIAMPVLIAIAVVSAIIMIGVYAIGGKFNADSGNRKETIKKVMWVLICLLIVILASAVVLAFKDTIAPITS
SIO_010081: SRED_RS00360
subclass of: SO_0000673
so part of: SRED_RS00360
location: 10223..10492
location: region:10223-10492:1
so has part: feature:10223-10492:1:exon

WP_004028771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10223-10492:1:exon

SRED_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00365
old locus tag: SRED_003096
so part of: sequence
location: 10504..12069
location: region:10504-12069:1
so has part: feature:10504-12069:1:exon
subclass of: SO_0000010

position:10504:1
position: 10504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12069:1
position: 12069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10504-12069:1:exon

SRED_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00365
old locus tag: SRED_003096
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MLLRKRKQDNLTVIKSKKPILKQGLERFVAYYFKKIFTILAIAMIPLLIIGCIVIAILSAILWFLPNTETSSNIQTVFSNTLNVETVETTGGSNIMGSIIGWAINSFCAILYLIFIKPIVWLLGGMQDVVYFIGGGALSEQLFSMNNISTIYWLLFGIAMAMFIVIIGTKAIAWMYNNRRHEMKAAITNVLIIIIAIPLIPTLFIMANTIMTMIVKLFLQNAPIDTNNIALAIFNSSFMNGVHHFSYIPVSWTFSDSGNFSYIICLVSECFMVYIMFTVCMFLFWRVIELFILLCYSPVVVVMSVADQGQQFRNWKDMVFGRFISYAFMFITYNIFIMSIAVLGQVATFMPNSLSQPIFILLGIFAFGFAVAKSPQIITSLIGGNTAMSDSIGNLMSFGMATNLAKIGGKFAWKSGKFAARNTIGKPIGLTQGISHAMKSGTPFKEATAGTLFGGFNPNTGGVAGAFAGQAIKTKDKVMTNISDYQAFNEQRNQKNNKDSVLEKASTKTTKKDKGDKNNGK
SIO_010081: SRED_RS00365
subclass of: SO_0000673
so part of: SRED_RS00365
location: 10504..12069
location: region:10504-12069:1
so has part: feature:10504-12069:1:exon

WP_004028770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10504-12069:1:exon

SRED_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00370
old locus tag: SRED_003097
so part of: sequence
location: 12059..14581
location: region:12059-14581:1
so has part: feature:12059-14581:1:exon
subclass of: SO_0000010

position:12059:1
position: 12059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14581:1
position: 14581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12059-14581:1:exon

SRED_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00370
old locus tag: SRED_003097
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MENNTKIITKKASKVRFTVSNVLGGIGWPELFIIFVGVVLITLSLTLLAKLSLIAGIISAIVFAVLNIFFITPNKNGDKLYYVIFIALGFLFKPKKHNIENDSEIQIINNRVVFDNKQILIYKINAVDLTLSTQEERNTPIYDFSNYLRALNFDFEIIKIDSKLNFDKNKNYLAQTLKQDSLKNSQKHQLNNFLSMSEYLENQDLKLEQNYYLIVFTNNNDKKLELSLLSYNQHLSLTLPTSKEIKKIVDKKIIPTNSTNSSVATSIKETAKYLKLDNNKFVSYFTVNQFPLTVNDMWLSNFSEIENVNISIRVRHLDNMTAFKLLDRAIRRAQDQETKKASEDIEYNLYLQNFNELLQLIQVGGETLKMVSIVFTCFADSKTDLDQVVSNLKNEMIRNRFTINDLTFRQFATYQCLLFNNNDKLKNIEQEMATITLASAWPFPTKPLNDPQGLIIGENEQLQPIIFDIKTKSSIRASHNAFIVGQMGFGKTFNVKKQLNWLYCNNTKIYIIDPQREYGGFANYHGGEIIEFGNNPKAKINPLEIFTDNFSEHILLLEQWFKNLYSDLTNIDLAKLQEYIIQLYKNFKITADTNLSKLTRKDYPILNDLYKLVYQKEQDTLLEKMLWKLTKGADGTLFNGVSTLEIKSDLIVFDIYNMAKSKTIANAQMYLLLALLDRVMKKNKKNNLTLPPEEQSWVCIAVDEAHLLINQDNLLALNYLFTLSKTCRKFNGILYILTQSIGDFTQHGENVKRQAQGIIEQCTYQFIHHLNSIGLQNYTELLTDNNMINAYEKNVILTPKKGLCLFSINDKRYILQVIATSEEIKAIGTQEDINNLGKEI
SIO_010081: SRED_RS00370
subclass of: SO_0000673
so part of: SRED_RS00370
location: 12059..14581
location: region:12059-14581:1
so has part: feature:12059-14581:1:exon

WP_137165018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12059-14581:1:exon

SRED_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00375
old locus tag: SRED_003098
so part of: sequence
location: 14585..14920
location: region:14585-14920:1
so has part: feature:14585-14920:1:exon
subclass of: SO_0000010

position:14585:1
position: 14585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14920:1
position: 14920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14585-14920:1:exon

SRED_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00375
old locus tag: SRED_003098
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: METKQNEWITVNILARRKLKRETEKAVLFSIPKHKGLSVWINKKCIHALRNGKVFAVGVKKNDEYTIWTYDPDSKQHLKSEIWQGQHLINLYQNEFKKIVAWLNKQQSLNK
SIO_010081: SRED_RS00375
subclass of: SO_0000673
so part of: SRED_RS00375
location: 14585..14920
location: region:14585-14920:1
so has part: feature:14585-14920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14585-14920:1:exon

SRED_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00380
old locus tag: SRED_003099
so part of: sequence
location: 15018..16532
location: region:15018-16532:1
so has part: feature:15018-16532:1:exon
subclass of: SO_0000010

position:15018:1
position: 15018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16532:1
position: 16532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15018-16532:1:exon

SRED_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00380
old locus tag: SRED_003099
inference: COORDINATES: protein motif:HMM:NF014044.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: type IV secretion system DNA-binding domain-containing protein
translation: MWKKIKNWRDKNISNKIFYWFIFILVIPFMLVCLINCASAIIIMFLKYHTLDFKNFYIAYADKYSWLISIVLFIIAFLFFLWFYVSHKIDNMDSPKTKQQKSNKASDKEFKTLQLKMLALNNRYGIPKNNLTQHTLLVGTTGSGKTTTLMFLVKQLTQIFKQTTIIIDGKGDIDLINKVKQLDPSAFVWEIGGTTEYNPFATKDSVVLSDKIMSLFDFSEPHYEALVNDYVLILTETLINKNIDLTLENIIKYFDISELKQLISKKNSNYEYLEKINEDDILGMRSRLNVYRQQLKISIGINNNLLELITKHKTILFSINSLMYPKLAGSVGKIIIQDLKELTTLKSVNQKINIVLDEFNVFASETIVNLINKSRSFNYQCFLSFQTINDLKTNNMNLTDTIFGNVSTIVCHNIKDPNTAEYVASVFGTQETEKLTRQLDFKNNTADMGSVRAVDEFIVHPNDLKTLKIGECYFKTTLSSGKLFIKKIAVDPTCLDGLIQHLNK
SIO_010081: SRED_RS00380
subclass of: SO_0000673
so part of: SRED_RS00380
location: 15018..16532
location: region:15018-16532:1
so has part: feature:15018-16532:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15018-16532:1:exon

SRED_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00385
old locus tag: SRED_003100
so part of: sequence
location: 17189..17611
location: region:17189-17611:1
so has part: feature:17189-17611:1:exon
subclass of: SO_0000010

position:17189:1
position: 17189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17611:1
position: 17611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17189-17611:1:exon

SRED_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00385
old locus tag: SRED_003100
inference: COORDINATES: protein motif:HMM:NF012651.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: single-stranded DNA-binding protein
translation: MNQFIGIGRTTKDIEIKQTSTGKEYAIFQLAIARPYSTQKETDFIPCQVWNKQAVVLQKYCQKGSQIAITGILQSFKNKEDKTQWIVQVSNYEFLHTNNDLKKDILLSEKSNEIIAEEQANYSSEDIKELFNGDDAILWD
SIO_010081: SRED_RS00385
subclass of: SO_0000673
so part of: SRED_RS00385
location: 17189..17611
location: region:17189-17611:1
so has part: feature:17189-17611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17189-17611:1:exon

SRED_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00390
old locus tag: SRED_003101
so part of: sequence
location: 17754..18407
location: region:17754-18407:1
so has part: feature:17754-18407:1:exon
subclass of: SO_0000010

position:17754:1
position: 17754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18407:1
position: 18407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17754-18407:1:exon

SRED_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00390
old locus tag: SRED_003101
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MQQLQKEEQVNYHFVEINGLNYKVINQLDEKKHVSNFYLPKKLVRQHPTRKDSYKVKIYDKFICVPKIMCFIDKTGKYFLVGIDMFFTYWIYNTRDNNKYRLAGYQAIKDTAIKELHYLTVSARRYEKEQATNPFLSGLTYQQAREQICAESDKLKAEYQTYVQSKYSANNIKKSSNRENNSLIDKFNTHYEKNKGDPPKLSEEELDQLLVELDNLD
SIO_010081: SRED_RS00390
subclass of: SO_0000673
so part of: SRED_RS00390
location: 17754..18407
location: region:17754-18407:1
so has part: feature:17754-18407:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17754-18407:1:exon

SRED_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00395
old locus tag: SRED_003102
so part of: sequence
location: 19012..19356
location: region:19012-19356:1
so has part: feature:19012-19356:1:exon
subclass of: SO_0000010

position:19012:1
position: 19012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19356:1
position: 19356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19012-19356:1:exon

SRED_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00395
old locus tag: SRED_003102
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MGEQEKILLLINSWGYLNTEQISLLLNKKENGTYKFIMKLVSNKFLNVDTLPKKNYYTLTSKAQSHLGREHKKNIKVNYYELAHQDMLIKWLCSQTDIEHNQLILFVICWVKKV
SIO_010081: SRED_RS00395
subclass of: SO_0000673
so part of: SRED_RS00395
location: 19012..19356
location: region:19012-19356:1
so has part: feature:19012-19356:1:exon

WP_004028778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19012-19356:1:exon

SRED_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00400
old locus tag: SRED_003103
so part of: sequence
location: 19358..19948
location: region:19358-19948:1
so has part: feature:19358-19948:1:exon
subclass of: SO_0000010

position:19358:1
position: 19358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19948:1
position: 19948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19358-19948:1:exon

SRED_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00400
old locus tag: SRED_003103
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: replication-relaxation family protein
translation: MTESLKILDLLNKWGYLTAEQIALLLNKPIESAKTNLKTLQKKQLYKIDKTTRKNIYFLSHKGNTFVGRVHKKNIKVNYYELAHQDMLIKWLCSQTDIEHYQTERELKMENGNLNAYPDLIITKNDDSEIYVEFERTQKSPSRFKKKLDGHTKWLRNGGQIYWITPTQTLANWIQRQIDKDDFKIELQQVIIWSTQ
SIO_010081: SRED_RS00400
subclass of: SO_0000673
so part of: SRED_RS00400
location: 19358..19948
location: region:19358-19948:1
so has part: feature:19358-19948:1:exon

WP_004028779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19358-19948:1:exon

SRED_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00405
old locus tag: SRED_003104
so part of: sequence
location: 20211..20522
location: region:20211-20522:1
so has part: feature:20211-20522:1:exon
subclass of: SO_0000010

position:20211:1
position: 20211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20522:1
position: 20522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20211-20522:1:exon

SRED_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00405
old locus tag: SRED_003104
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004028781.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MFDLNWSAVISLKYEDDEFYLLWQYYRNGKNKITEKQKDYIKNLFYQYYIPNTERQFEYLENKLNELNTRSASAIINGLLQKDKRLIALLVKYLEQFKPNNLT
SIO_010081: SRED_RS00405
subclass of: SO_0000673
so part of: SRED_RS00405
location: 20211..20522
location: region:20211-20522:1
so has part: feature:20211-20522:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20211-20522:1:exon

SRED_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00410
old locus tag: SRED_003105
so part of: sequence
location: 20766..21548
location: region:20766-21548:1
so has part: feature:20766-21548:1:exon
subclass of: SO_0000010

position:20766:1
position: 20766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21548:1
position: 21548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20766-21548:1:exon

SRED_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00410
old locus tag: SRED_003105
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: ParA family protein
translation: MKKITFANSKGGVGKTTLTINVAQLLSQIGKKVLLFDFDPQSNLTNTLLENPIDTNNITKWILGADKDDLISTILETRISNIFLVPSYSKMVLETNNIVLNQPNSEFKFKMNLEEIEKILINKFDYIFFDTYPSMNTILLNVLLASDEIIVPIEPHSYSFEGITTMFKPYLETINNSKKMGMNIKNNINYYVLNKIQKNKLHQSVFELISQNEIGKKLLDTHIPLSATKQKETMLLKFAAITNNNPIYKLVMELTNKGVI
SIO_010081: SRED_RS00410
subclass of: SO_0000673
so part of: SRED_RS00410
location: 20766..21548
location: region:20766-21548:1
so has part: feature:20766-21548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20766-21548:1:exon

SRED_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00415
old locus tag: SRED_003106
so part of: sequence
location: 21551..21823
location: region:21551-21823:1
so has part: feature:21551-21823:1:exon
subclass of: SO_0000010

position:21551:1
position: 21551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21823:1
position: 21823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21551-21823:1:exon

SRED_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00415
old locus tag: SRED_003106
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MNNKLLASLKNKIDSSASQIPKEESFNEIKKEIIYSEIKDETKIVRKNISITLKQQKMINEMSKNNYEINLSSIARREIEKIYNEFKLKK
SIO_010081: SRED_RS00415
subclass of: SO_0000673
so part of: SRED_RS00415
location: 21551..21823
location: region:21551-21823:1
so has part: feature:21551-21823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21551-21823:1:exon

SRED_RS07110
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS07110
old locus tag: SRED_003107
so part of: sequence
location: 21886..22038
location: region:21886-22038:1
so has part: feature:21886-22038:1:exon
subclass of: SO_0000010

position:21886:1
position: 21886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22038:1
position: 22038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21886-22038:1:exon

SRED_RS07110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS07110
old locus tag: SRED_003107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004028791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKADNKDTINHNLMIVDVDLQKCLNCSFITQKIDDEWFTINTGDKNCGK
SIO_010081: SRED_RS07110
subclass of: SO_0000673
so part of: SRED_RS07110
location: 21886..22038
location: region:21886-22038:1
so has part: feature:21886-22038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21886-22038:1:exon

SRED_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00420
old locus tag: SRED_003108
so part of: sequence
location: 22335..24686
location: region:22335-24686:1
so has part: feature:22335-24686:1:exon
subclass of: SO_0000010

position:22335:1
position: 22335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24686:1
position: 24686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22335-24686:1:exon

SRED_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00420
old locus tag: SRED_003108
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004028785.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: DUF3688 family protein
translation: MKKLLSILTITTLTASVPAPLLANTPLTRNKRDVGTTAKDVTNNYWTFIASISKEDATKNKDKYYFVIYKNKGESNWQIYKMQMGKPNDRPIFGETVESHKAFYRWDGVGEPNLPEINSLTGEIINWKGFDIKIKEKYGKENIVVWNGINARGDNNFYFIIWRGRKSDKWEIVKYKNIGLNTSNTIIATSKTGAELDRVSHNFSFSNGSEWADAKNDDGTYFKSVYRWDGVGEPNLPEINPNTGNITNWKQPTKNDFQQGILFSLVDGSKTATWSNNGMRLTVDGETNININNPNVTEVYWDGSLQPQLSKQWKINVKPETAPRDHKLVIKYNINGTKYTSEDIMVSMLAKIDSTPTPVQQNLSDLIKNTDLGNIIDNNDDTIFLAVNKANSEIIDDFSQIEITKKVNHSATLSAKPDSKSYKGSVDIKYNVVPATVVDLKIELKPTVSSAIVNKDYLAQLDSSKMTNKVDTFYYANSESVITMVKPTDSSVITGVVYGCDDKWNKTSQSSNIDPAKGIKLDGSQLGAVQGRYLIDLKNELGQTNTIYLQIHSEKDEKAKAYWNTDNGKQFEQWAQDQEQGYENIRGSSASQLNNLFELSKTWKQSLKHLDLKLDNFVVDNIKNVSQDEIDNYKTKLLASVKAQVEKYVPGVVEKTDYVISVDNLVAGDWTTSKDVKVQAVDGSTKLLSFTVKTIPVQQKEEVTALASTPVSSDKGGKSIWKILGIVAGSLAGLGLAYWLFKRFVFNKYFLPKIKRRRHLKLVEQVRKEEAEKDAQNNKGGEE
SIO_010081: SRED_RS00420
subclass of: SO_0000673
so part of: SRED_RS00420
location: 22335..24686
location: region:22335-24686:1
so has part: feature:22335-24686:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22335-24686:1:exon

SRED_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00425
old locus tag: SRED_003109
so part of: sequence
location: 24686..24955
location: region:24686-24955:1
so has part: feature:24686-24955:1:exon
subclass of: SO_0000010

position:24955:1
position: 24955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24686-24955:1:exon

SRED_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00425
old locus tag: SRED_003109
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MMTLLATSGVDDLLNKILGIAMPVLIAIAVVSAIIMIGVYAIGGKFNADSGNRKETIKKVMWVLICLLIVILASAVVLAFKDTIAPITS
SIO_010081: SRED_RS00425
subclass of: SO_0000673
so part of: SRED_RS00425
location: 24686..24955
location: region:24686-24955:1
so has part: feature:24686-24955:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24686-24955:1:exon

SRED_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00430
old locus tag: SRED_003110
so part of: sequence
location: 24967..26532
location: region:24967-26532:1
so has part: feature:24967-26532:1:exon
subclass of: SO_0000010

position:24967:1
position: 24967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26532:1
position: 26532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24967-26532:1:exon

SRED_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00430
old locus tag: SRED_003110
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MLLRKRKQDNLTVIKSKKPILKQGLERFVAYYFKKIFTILAIAMIPLLIIGCIVIAILSAILWFLPNTETSSNIQTVFSNTLNVETVETTGGSNIMGSIIGWAINSFCAILYLIFIKPIVWLLGGMQDVVYFIGGGALSEQLFSMNNISTIYWLLFGIAMAMFIVIIGTKAIAWMYNNRRHEMKAAITNVLIIIIAIPLIPTLFIMANTIMTMIVKLFLQNAPIDTNNIALAIFNSSFMNGVHHFSYIPVSWTFSDSGNFSYIICLVSECFMVYIMFTVCMFLFWRVIELFILLCYSPVVVVMSVADQGQQFRNWKDMVFGRFISYAFMFITYNIFIMSIAVLGQVATFMPNSLSQPIFILLGIFAFGFAVAKSPQIITSLIGGNTAMSDSIGNLMSFGMATNLAKIGGKFAWKSGKFAARNTIGKPIGLTQGISHAMKSGTPFKEATAGTLFGGFNPNTGGVAGAFAGQAIKTKDKVMTNISDYQAFNEQRNQKNNKDSVLEKASTKTTKKDKGDKNNGK
SIO_010081: SRED_RS00430
subclass of: SO_0000673
so part of: SRED_RS00430
location: 24967..26532
location: region:24967-26532:1
so has part: feature:24967-26532:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24967-26532:1:exon

SRED_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00435
old locus tag: SRED_003111
so part of: sequence
location: 26522..29044
location: region:26522-29044:1
so has part: feature:26522-29044:1:exon
subclass of: SO_0000010

position:26522:1
position: 26522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29044:1
position: 29044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26522-29044:1:exon

SRED_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00435
old locus tag: SRED_003111
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MENNTKIITKKASKVRFTVSNVLGGIGWPELFIIFVGVVLITLSLTLLAKLSLIAGIISAIVFAVLNIFFITPNKNGDKLYYVIFIALGFLFKPKKHNIENDSEIQIINNRVVFDNKQILIYKINAVDLTLSTQEERNTPIYDFSNYLRALNFDFEIIKIDSKLNFDKNKNYLAQTLKQDSLKNSQKHQLNNFLSMSEYLENQDLKLEQNYYLIVFTNNNDKKLELSLLSYNQHLSLTLPTSKEIKKIVDKKIIPTNSTNSSVATSIKETAKYLKLDNNKFVSYFTVNQFPLTVNDMWLSNFSEIENVNISIRVRHLDNMTAFKLLDRAIRRAQDQETKKASEDIEYNLYLQNFNELLQLIQVGGETLKMVSIVFTCFADSKTDLDQVVSNLKNEMIRNRFTINDLTFRQFATYQCLLFNNNDKLKNIEQEMATITLASAWPFPTKPLNDPQGLIIGENEQLQPIIFDIKTKSSIRASHNAFIVGQMGFGKTFNVKKQLNWLYCNNTKIYIIDPQREYGGFANYHGGEIIEFGNNPKAKINPLEIFTDNFSEHILLLEQWFKNLYSDLTNIDLAKLQEYIIQLYKNFKITADTNLSKLTRKDYPILNDLYKLVYQKEQDTLLEKMLWKLTKGADGTLFNGVSTLEIKSDLIVFDIYNMAKSKTIANAQMYLLLALLDRVMKKNKKNNLTLPPEEQSWVCIAVDEAHLLINQDNLLALNYLFTLSKTCRKFNGILYILTQSIGDFTQHGENVKRQAQGIIEQCTYQFIHHLNSIGLQNYTELLTDNNMINAYEKNVILTPKKGLCLFSINDKRYILQVIATSEEIKAIGTQEDINNLGKEI
SIO_010081: SRED_RS00435
subclass of: SO_0000673
so part of: SRED_RS00435
location: 26522..29044
location: region:26522-29044:1
so has part: feature:26522-29044:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26522-29044:1:exon

SRED_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00440
old locus tag: SRED_003112
so part of: sequence
location: 29048..29383
location: region:29048-29383:1
so has part: feature:29048-29383:1:exon
subclass of: SO_0000010

position:29048:1
position: 29048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29383:1
position: 29383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29048-29383:1:exon

SRED_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00440
old locus tag: SRED_003112
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: METKQNEWITVNILARRKLKRETEKAVLFSIPKHKGLSVWINKKCIHALRNGKVFAVGVKKNDEYTIWTYDPDSKQHLKSEIWQGQHLINLYQNEFKKIVAWLNKQQSLNK
SIO_010081: SRED_RS00440
subclass of: SO_0000673
so part of: SRED_RS00440
location: 29048..29383
location: region:29048-29383:1
so has part: feature:29048-29383:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29048-29383:1:exon

SRED_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00445
old locus tag: SRED_003113
so part of: sequence
location: 29481..30995
location: region:29481-30995:1
so has part: feature:29481-30995:1:exon
subclass of: SO_0000010

position:29481:1
position: 29481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30995:1
position: 30995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29481-30995:1:exon

SRED_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00445
old locus tag: SRED_003113
inference: COORDINATES: protein motif:HMM:NF014044.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: type IV secretion system DNA-binding domain-containing protein
translation: MWKKIKNWRDKNISNKIFYWFIFILVIPFMLVCLINCASAIIIMFLKYHTLDFKNFYIAYADKYSWLISIVLFIIAFLFFLWFYVSHKIDNMDSPKTKQQKSNKASDKEFKTLQLKMLALNNRYGIPKNNLTQHTLLVGTTGSGKTTTLMFLVKQLTQIFKQTTIIIDGKGDIDLINKVKQLDPSAFVWEIGGTTEYNPFATKDSVVLSDKIMSLFDFSEPHYEALVNDYVLILTETLINKNIDLTLENIIKYFDISELKQLISKKNSNYEYLEKINEDDILGMRSRLNVYRQQLKISIGINNNLLELITKHKTILFSINSLMYPKLAGSVGKIIIQDLKELTTLKSVNQKINIVLDEFNVFASETIVNLINKSRSFNYQCFLSFQTINDLKTNNMNLTDTIFGNVSTIVCHNIKDPNTAEYVASVFGTQETEKLTRQLDFKNNTADMGSVRAVDEFIVHPNDLKTLKIGECYFKTTLSSGKLFIKKIAVDPTCLDGLIQHLNK
SIO_010081: SRED_RS00445
subclass of: SO_0000673
so part of: SRED_RS00445
location: 29481..30995
location: region:29481-30995:1
so has part: feature:29481-30995:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29481-30995:1:exon

SRED_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00450
old locus tag: SRED_003114
so part of: sequence
location: 31652..32074
location: region:31652-32074:1
so has part: feature:31652-32074:1:exon
subclass of: SO_0000010

position:31652:1
position: 31652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32074:1
position: 32074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31652-32074:1:exon

SRED_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00450
old locus tag: SRED_003114
inference: COORDINATES: protein motif:HMM:NF012651.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: single-stranded DNA-binding protein
translation: MNQFIGIGRTTKDIEIKQTSTGKEYAIFQLAIARPYSTQKETDFIPCQVWNKQAVVLQKYCQKGSQIAITGILQSFKNKEDKTQWIVQVSNYEFLHTNNDLKKDILLSEKSNEIIAEEQANYSSEDIKELFNGDDAILWD
SIO_010081: SRED_RS00450
subclass of: SO_0000673
so part of: SRED_RS00450
location: 31652..32074
location: region:31652-32074:1
so has part: feature:31652-32074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31652-32074:1:exon

SRED_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00455
old locus tag: SRED_003115
so part of: sequence
location: 32217..32870
location: region:32217-32870:1
so has part: feature:32217-32870:1:exon
subclass of: SO_0000010

position:32217:1
position: 32217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32870:1
position: 32870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32217-32870:1:exon

SRED_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00455
old locus tag: SRED_003115
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MQQLQKEEQVNYHFVEINGLNYKVINQLDEKKHVSNFYLPKKLVRQHPTRKDSYKVKIYDKFICVPKIMCFIDKTGKYFLVGIDMFFTYWIYNTRDNNKYRLAGYQAIKDTAIKELHYLTVSARRYEKEQATNPFLSGLTYQQAREQICAESDKLKAEYQTYVQSKYSANNIKKSSNRENNSLIDKFNTHYEKNKGDPPKLSEEELDQLLVELDNLD
SIO_010081: SRED_RS00455
subclass of: SO_0000673
so part of: SRED_RS00455
location: 32217..32870
location: region:32217-32870:1
so has part: feature:32217-32870:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32217-32870:1:exon

SRED_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS00460
so part of: sequence
location: 33475..33819
location: region:33475-33819:1
so has part: feature:33475-33819:1:exon
subclass of: SO_0000010

position:33475:1
position: 33475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33819:1
position: 33819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33475-33819:1:exon

SRED_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS00460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MGEQEKILLLINSWGYLNTEQISLLLNKKENGTYKFIMKLVSNKFLNVDTLPKKNYYTLTSKAQSHLGREHKKNIKVNYYELAHQDMLIKWLCSQTDIEHNQLILFVICWVKKV
SIO_010081: SRED_RS00460
subclass of: SO_0000673
so part of: SRED_RS00460
location: 33475..33819
location: region:33475-33819:1
so has part: feature:33475-33819:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33475-33819:1:exon

SRED_RS07115
type: Gene
subclass of: SO_0000704
RO_0002162: 2134
locus tag: SRED_RS07115
so part of: sequence
location: 33821..33967
location: region:33821-33967:1
so has part: feature:33821-33967:1:exon
subclass of: SO_0000010

position:33821:1
position: 33821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33967:1
position: 33967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33821-33967:1:exon

SRED_RS07115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2134
locus tag: SRED_RS07115
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MTESLKILDLLNKWGYLTAEQIALLLNKPIESAKTNLKTLQKKLLQNR
SIO_010081: SRED_RS07115
subclass of: SO_0000673
so part of: SRED_RS07115
location: 33821..33967
location: region:33821-33967:1
so has part: feature:33821-33967:1:exon

WP_168175920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33821-33967:1:exon