Spiroplasma citri strain R8-A2 plasmid pSCI26, complete sequence.
type: Entry
definition: Spiroplasma citri strain R8-A2 plasmid pSCI26, complete sequence.
sequence version: NZ_CP013198.1
sequence date: 2023-04-09
sequence: sequence
division: CON
label: NZ_CP013198.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN04110376
keyword: RefSeq
source: Spiroplasma citri
organism: Spiroplasma citri
taxonomy: Bacteria; Mycoplasmatota; Mollicutes; Entomoplasmatales; Spiroplasmataceae; Spiroplasma.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP013198.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT v. 2.3\nGenome Coverage :: 244.45x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/09/2023 08:56:28\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,150\nCDSs (total) :: 2,112\nGenes (coding) :: 2,057\nCDSs (with protein) :: 2,057\nGenes (RNA) :: 38\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 55\nCDSs (without protein) :: 55\nPseudo Genes (ambiguous residues) :: 0 of 55\nPseudo Genes (frameshifted) :: 31 of 55\nPseudo Genes (incomplete) :: 24 of 55\nPseudo Genes (internal stop) :: 20 of 55\nPseudo Genes (multiple problems) :: 18 of 55\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 26182
topology: circular
so has quality: SO_0000988
location: 1..26182
location: region:1-26182:1
RO_0002162: 2133

NZ_CP013198
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN04110376
type: BioSample
SIO_000068: biosample

1
title: Complete Genome Sequence of Spiroplasma citri strain R8-A2
author: Davis, R.E.
author: Shao, J.
author: Gasparich, G.
author: Gaynor, B.
author: Donofrio, N.
journal: Unpublished

2
title: Direct Submission
author: Davis, R.E.
author: Shao, J.
author: Gasparich, G.
author: Gaynor, B.
author: Donofrio, N.
journal: Submitted (01-OCT-2015) United States Department of Agriculture, Agricultural Research Service, Molecular Plant Pathology, 10300 Baltimore Avenue, Beltsville, MD 20705, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26182:1
position: 26182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-26182:1:source
so part of: sequence
organism: Spiroplasma citri
mol type: genomic DNA
strain: R8-A2
isolation source: Navel
host: Citrus sinensis
culture collection: ATCC:27556
type material: type strain of Spiroplasma citri
plasmid: pSCI26
country: Morocco
collection date: 1971-06

2133
type: Taxonomy
SIO_000068: taxonomy

SCITRI_RS09315
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09315
old locus tag: SCITRI_001993
so part of: sequence
location: complement(join(26160..26182,1..1060))
location: region:1-26182:-1
so has part: feature:1-1060:-1:exon
so has part: feature:26160-26182:-1:exon
subclass of: SO_0000010

54239736
type: Gene
SIO_000068: ncbigene

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26182:-1
position: 26182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1060:-1:exon

position:1060:-1
position: 1060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26160-26182:-1:exon

position:26160:-1
position: 26160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCITRI_RS09315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09315
old locus tag: SCITRI_001993
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MQRLKNHKAKQAASKKVGAKSKSFLPQPSPIMSLSEEITTITKQTSMPKKMSVKNSNSKIENLMKPPSKDSEHINDQFTTFSTWNHFDANQVKNKLELSNSFEDEPKTIIRRKETEEVTTIRRDLRPILAQQISQIKRNGLSIVDFVVDPNDKIEIEKGDEEILVRLIKQSPVEISLNEFAERDIAPPKPKPVKIIRTAEDPLSIEERLILRLENKSRFHNKLTDAEQTQLEQLKTTFAAKLNYKQIKKDRQTAKAKKAINNQSNQVTIDEQEFLFDEDLYKKTNYNHRYDETKRPNIEERLVYEQKMTEYLFEVRRQYEQGYNRQISQELADFNRAINLSRAIKANDEELNDDNWLKIS
SIO_010081: SCITRI_RS09315
subclass of: SO_0000673
so part of: SCITRI_RS09315
location: complement(join(26160..26182,1..1060))
location: region:1-26182:-1
so has part: feature:1-1060:-1:exon
so has part: feature:26160-26182:-1:exon

WP_071938075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26160-26182:-1:exon

SCITRI_RS09320
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09320
old locus tag: SCITRI_001929
so part of: sequence
location: complement(1191..1379)
location: region:1191-1379:-1
so has part: feature:1191-1379:-1:exon
subclass of: SO_0000010

54239737
type: Gene
SIO_000068: ncbigene

position:1191:-1
position: 1191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379:-1
position: 1379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1191-1379:-1:exon

SCITRI_RS09320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09320
old locus tag: SCITRI_001929
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MAKEKDSESVVTSRVNYGNIIDSDRDTTELMDKKLTPATIKVLLGQLDENSAEYQMLKQKIC
SIO_010081: SCITRI_RS09320
subclass of: SO_0000673
so part of: SCITRI_RS09320
location: complement(1191..1379)
location: region:1191-1379:-1
so has part: feature:1191-1379:-1:exon

WP_071938074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1191-1379:-1:exon

SCITRI_RS09325
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09325
old locus tag: SCITRI_001930
so part of: sequence
location: complement(1530..1925)
location: region:1530-1925:-1
so has part: feature:1530-1925:-1:exon
subclass of: SO_0000010

54239738
type: Gene
SIO_000068: ncbigene

position:1530:-1
position: 1530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1925:-1
position: 1925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1530-1925:-1:exon

SCITRI_RS09325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09325
old locus tag: SCITRI_001930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKQAQRQQELALRDLQQIRLNELKKREEYLATLSKPVKLPKINKKILNSEVVGLELQVKPIFKNRNDINNISSTEDNYGTIFMREIGQALLYEYNMYHQPPEQESSPLSTEKSIKSKRQRDFHKKGPKSRW
SIO_010081: SCITRI_RS09325
subclass of: SO_0000673
so part of: SCITRI_RS09325
location: complement(1530..1925)
location: region:1530-1925:-1
so has part: feature:1530-1925:-1:exon

WP_071937302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1530-1925:-1:exon

SCITRI_RS09335
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09335
old locus tag: SCITRI_001931
so part of: sequence
location: 2614..2859
location: region:2614-2859:1
so has part: feature:2614-2859:1:exon
subclass of: SO_0000010

54239739
type: Gene
SIO_000068: ncbigene

position:2614:1
position: 2614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2859:1
position: 2859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2614-2859:1:exon

SCITRI_RS09335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09335
old locus tag: SCITRI_001931
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKIIKQQKICDVINCYKLSSFITEEFETNKILWTCENHKVLLNQIKYINKEKIWLYNNLENSRIDVDWKTGYLKIFFSKIK
SIO_010081: SCITRI_RS09335
subclass of: SO_0000673
so part of: SCITRI_RS09335
location: 2614..2859
location: region:2614-2859:1
so has part: feature:2614-2859:1:exon

WP_071891715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2614-2859:1:exon

SCITRI_RS10650
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS10650
old locus tag: SCITRI_001932
so part of: sequence
location: 3348..3512
location: region:3348-3512:1
so has part: feature:3348-3512:1:exon
subclass of: SO_0000010

54239972
type: Gene
SIO_000068: ncbigene

position:3348:1
position: 3348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3512:1
position: 3512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3348-3512:1:exon

SCITRI_RS10650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS10650
old locus tag: SCITRI_001932
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004027711.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MLGIWIFFLKRKCQICHSILNKKIVGSLYFKLNVCSMQCNRKRVDLSNVSETKL
SIO_010081: SCITRI_RS10650
subclass of: SO_0000673
so part of: SCITRI_RS10650
location: 3348..3512
location: region:3348-3512:1
so has part: feature:3348-3512:1:exon

WP_167693716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3348-3512:1:exon

SCITRI_RS09340
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09340
old locus tag: SCITRI_001934
so part of: sequence
location: 3614..3952
location: region:3614-3952:1
so has part: feature:3614-3952:1:exon
subclass of: SO_0000010

54239740
type: Gene
SIO_000068: ncbigene

position:3614:1
position: 3614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3952:1
position: 3952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3614-3952:1:exon

SCITRI_RS09340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09340
old locus tag: SCITRI_001934
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MVFDWVISLFIRVTLIQSSKNILINSGLPFKIIEEANDEQIKNIISIYVKENLGRELIGEKFYTILNYNIQQLMYKYANYPQTTIYQLEKELTELKKKLKDIKKLEKNKIER
SIO_010081: SCITRI_RS09340
subclass of: SO_0000673
so part of: SCITRI_RS09340
location: 3614..3952
location: region:3614-3952:1
so has part: feature:3614-3952:1:exon

WP_071937300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3614-3952:1:exon

SCITRI_RS10435
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS10435
old locus tag: SCITRI_1935
so part of: sequence
location: 4100..4270
location: region:4100-4270:1
so has part: feature:4100-4270:1:exon
subclass of: SO_0000010

54239930
type: Gene
SIO_000068: ncbigene

position:4100:1
position: 4100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4270:1
position: 4270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4100-4270:1:exon

SCITRI_RS10435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS10435
old locus tag: SCITRI_1935
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MAGIKLEIKLLIDKYMYDNEKFILIDYKYQNNWQEYEIIRTYDRQDGFLELFLSLR
SIO_010081: SCITRI_RS10435
subclass of: SO_0000673
so part of: SCITRI_RS10435
location: 4100..4270
location: region:4100-4270:1
so has part: feature:4100-4270:1:exon

WP_155522092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4100-4270:1:exon

SCITRI_RS09345
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09345
old locus tag: SCITRI_001936
so part of: sequence
location: 4281..4679
location: region:4281-4679:1
so has part: feature:4281-4679:1:exon
subclass of: SO_0000010

54239741
type: Gene
SIO_000068: ncbigene

position:4281:1
position: 4281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4679:1
position: 4679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4281-4679:1:exon

SCITRI_RS09345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09345
old locus tag: SCITRI_001936
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKSNSVVDIFDFVADSIQQYTYDIQEQIKAEIKNVGEKILAEIKITCPISNKHLTKRRHLKDYFVFKIKLTKDKIIGVIYATKQYQIIHLLEYGYINHWNNEKINPRPFLRNAYNKYIDEYIKKIETILKY
SIO_010081: SCITRI_RS09345
subclass of: SO_0000673
so part of: SCITRI_RS09345
location: 4281..4679
location: region:4281-4679:1
so has part: feature:4281-4679:1:exon

WP_071937188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4281-4679:1:exon

SCITRI_RS09350
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09350
old locus tag: SCITRI_001937
so part of: sequence
location: 4685..5062
location: region:4685-5062:1
so has part: feature:4685-5062:1:exon
subclass of: SO_0000010

54239742
type: Gene
SIO_000068: ncbigene

position:4685:1
position: 4685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5062:1
position: 5062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4685-5062:1:exon

SCITRI_RS09350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09350
old locus tag: SCITRI_001937
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MIINNKREQNINLIIELLKKLYPTKKIKYTFFNFNEDNFNNIENNITFYRINDNTFFSSDNINNFIRQTFQICFNFKNEINFNEIEKLENELINKKINYQLAQEFYLYEQNLYIVIYEIFLLLKR
SIO_010081: SCITRI_RS09350
subclass of: SO_0000673
so part of: SCITRI_RS09350
location: 4685..5062
location: region:4685-5062:1
so has part: feature:4685-5062:1:exon

WP_071937187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4685-5062:1:exon

SCITRI_RS09355
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09355
old locus tag: SCITRI_001938
so part of: sequence
location: 5078..5665
location: region:5078-5665:1
so has part: feature:5078-5665:1:exon
subclass of: SO_0000010

54239743
type: Gene
SIO_000068: ncbigene

position:5078:1
position: 5078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5665:1
position: 5665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5078-5665:1:exon

SCITRI_RS09355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09355
old locus tag: SCITRI_001938
inference: COORDINATES: protein motif:HMM:TIGR01603.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MNKNIIEFGLENVHYAKLKYNQTTNKTEYAIPQKILGAVNLSLNVSENTNTFYADNKPYYISHSFQGYSGSLTIAKPSDDFEQEILGIEKDKNGNYIEKSTSLKSEIALGFEIKGDLEEKRIWLLRVNLKRPNQTHNTQTENVNPDTYTFELNALPRIEDNVIKIKTTKKANENNYNNYFSQVPKLEKEEKNENE
SIO_010081: SCITRI_RS09355
subclass of: SO_0000673
so part of: SCITRI_RS09355
location: 5078..5665
location: region:5078-5665:1
so has part: feature:5078-5665:1:exon

WP_071937299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5078-5665:1:exon

SCITRI_RS09360
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09360
old locus tag: SCITRI_001939
so part of: sequence
location: 5658..5990
location: region:5658-5990:1
so has part: feature:5658-5990:1:exon
subclass of: SO_0000010

54239744
type: Gene
SIO_000068: ncbigene

position:5658:1
position: 5658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5990:1
position: 5990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5658-5990:1:exon

SCITRI_RS09360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09360
old locus tag: SCITRI_001939
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MNRYLESLKLKVNISTYALIIYEDLFGSYGELLNKLEKDKYEFSFILKLLFSFTKAADENQFKDFKEFCQKITFKEITENVNEINNLIMEFVGASVNDENLQEYGELTKK
SIO_010081: SCITRI_RS09360
subclass of: SO_0000673
so part of: SCITRI_RS09360
location: 5658..5990
location: region:5658-5990:1
so has part: feature:5658-5990:1:exon

WP_071937298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5658-5990:1:exon

SCITRI_RS09365
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09365
old locus tag: SCITRI_001940
so part of: sequence
location: 6178..7725
location: region:6178-7725:1
so has part: feature:6178-7725:1:exon
subclass of: SO_0000010

54239745
type: Gene
SIO_000068: ncbigene

position:6178:1
position: 6178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7725:1
position: 7725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6178-7725:1:exon

SCITRI_RS09365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09365
old locus tag: SCITRI_001940
inference: COORDINATES: protein motif:HMM:NF021648.2
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: phage tail tape measure protein
translation: MAKEIKGMSITLDSNVLELNNNFKKIADNIKLSGSKLKNFDNNLKFKNGDEIDILNEKFNEYKNIIDNISEKKELLIEKYNQLNKTILETQEALSKTNDTAEREKLIQKQNKLNKEYEYTKINIDASNRSLNNFNEKLKNTAQEIKNIPFKKFEEFGTKCQEIGKKLSTHITIPILAIKGILTKITVDTAKYAGELKKTSKEIGITAENLQIFRYIAKRTGITSEELEKSFKKLRQGISAISYGISNETTEAFNKLGINIKNNEGSLKDTGTIFLELKKSLEQISDETEKNNLIMDVFGSKLGKNLIPMLALSDEEIKKMTSNIKDLGIVSNENVEKTTLLNKKWNEFKHVVNITKMNLASALLPVFESLVSFLEVSLIPIIKGITNFFNMFNDTTKKTIFIILGISASLGAVVYTIGKIINVISSLKTLLLGMAKHPILYGVLVSLSALAAGGVWLYNKFNKPPQNINQENQTNNYNKIENKNEFKPTIIIEGENDKERAEKILEYIGQWNNRV
SIO_010081: SCITRI_RS09365
subclass of: SO_0000673
so part of: SCITRI_RS09365
location: 6178..7725
location: region:6178-7725:1
so has part: feature:6178-7725:1:exon

WP_071937184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6178-7725:1:exon

SCITRI_RS09370
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09370
old locus tag: SCITRI_001941
so part of: sequence
location: 7735..8661
location: region:7735-8661:1
so has part: feature:7735-8661:1:exon
subclass of: SO_0000010

54239746
type: Gene
SIO_000068: ncbigene

position:7735:1
position: 7735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8661:1
position: 8661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7735-8661:1:exon

SCITRI_RS09370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09370
old locus tag: SCITRI_001941
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MYNLPFRTFKISNSKDNLINLCDLDNIIILSFNGLNINFDNNYLNIDNNFILNNCKHSLNQINFKLLFIGPNPYGKFNDFINKLNINLDNKSSPFLLFYSFWINEKTKLEYYCEVIIKSIIKTELNNNNDLEVDFILEQLTNWKKEEDKLFEIKPNKTSGKIYNEHNNKYYFKLNRIKYTNQYNEKIKISNNSYLASDTLITINGPTKDPYLKLENINGKVISELKINAEINENEKIIIDSRLKTQSIIKVDLKTEKSYNIYQYQDFKYTNFIQIPPGNYHILYSSNLSKDKQVGNINIKKFEEYILI
SIO_010081: SCITRI_RS09370
subclass of: SO_0000673
so part of: SCITRI_RS09370
location: 7735..8661
location: region:7735-8661:1
so has part: feature:7735-8661:1:exon

WP_071937297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7735-8661:1:exon

SCITRI_RS09375
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09375
old locus tag: SCITRI_001942
so part of: sequence
location: 8933..10126
location: region:8933-10126:1
so has part: feature:8933-10126:1:exon
subclass of: SO_0000010

54239747
type: Gene
SIO_000068: ncbigene

position:8933:1
position: 8933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10126:1
position: 10126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8933-10126:1:exon

SCITRI_RS09375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09375
old locus tag: SCITRI_001942
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MIDYLDELSNIVLEINKAQQEAEEKARQEAKEELLKLEIKKDKNIYQGNRTKLIILGVNFEKGSLFYKDNCIVENYKIFLDIYTPQLSTFNAYNYYNLNVEIEDIVCILNNENQLYIGIITHIEKNKDENLYTFTTKNIESIFDFKIYNIYKNKSWYIFLTLINIIYNNLPFIKLNKKINDENNNNPKFFEENEEKEFNFYQFINKIFKITNIFLKFNIDLKNFILNCDICKDGQEDIKLNNYKVKYNIKCITNIEIEELNQKSINRIDFYQKNNSNKYKRAILLKNNEISFDEKNNNLQNNLIKNKIYELEEKDFTLENIITISNQEFKLSEYSHLIKFDITKDNNILNLNNLQLRDKFTLLFNKKEYNSILSGIILESNKNTITLIFGQVRLYEK
SIO_010081: SCITRI_RS09375
subclass of: SO_0000673
so part of: SCITRI_RS09375
location: 8933..10126
location: region:8933-10126:1
so has part: feature:8933-10126:1:exon

WP_071937296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8933-10126:1:exon

SCITRI_RS12250
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS12250
so part of: sequence
location: 10277..10399
location: region:10277-10399:1
so has part: feature:10277-10399:1:exon
subclass of: SO_0000010

79946606
type: Gene
SIO_000068: ncbigene

position:10277:1
position: 10277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10399:1
position: 10399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10277-10399:1:exon

SCITRI_RS12250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS12250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MAKKMTKKDYELLESKFDEWEQDIYNHKELMEALKELANK
SIO_010081: SCITRI_RS12250
subclass of: SO_0000673
so part of: SCITRI_RS12250
location: 10277..10399
location: region:10277-10399:1
so has part: feature:10277-10399:1:exon

WP_257785688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10277-10399:1:exon

SCITRI_RS11970
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS11970
old locus tag: SCITRI_001944
so part of: sequence
location: 11082..11582
location: region:11082-11582:1
so has part: feature:11082-11582:1:exon
subclass of: SO_0000010

79946550
type: Gene
SIO_000068: ncbigene

position:11082:1
position: 11082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11582:1
position: 11582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11082-11582:1:exon

SCITRI_RS11970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS11970
old locus tag: SCITRI_001944
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MIIVISSLYVIRKISYLFGYLLKINSNNIKHQIIWNTIITIIAIGLLLGLTIVFFPFQTQLSHILYLTIGLGGSQILIGCFLGHLSRIQKNNIISLVGTDHLTLGLMIEHVFGHAIFSLLLSVIIIPIIINFYTNILTYIIIYSIIIGMLLLSFSFIKLPVKKIKT
SIO_010081: SCITRI_RS11970
subclass of: SO_0000673
so part of: SCITRI_RS11970
location: 11082..11582
location: region:11082-11582:1
so has part: feature:11082-11582:1:exon

WP_237238266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11082-11582:1:exon

SCITRI_RS09385
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09385
old locus tag: SCITRI_001945
so part of: sequence
location: complement(11830..12675)
location: region:11830-12675:-1
so has part: feature:11830-12675:-1:exon
subclass of: SO_0000010

54239749
type: Gene
SIO_000068: ncbigene

position:11830:-1
position: 11830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12675:-1
position: 12675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11830-12675:-1:exon

SCITRI_RS09385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09385
old locus tag: SCITRI_001945
inference: COORDINATES: protein motif:HMM:NF012870.2
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: DDE-type integrase/transposase/recombinase
translation: MLKDLIKKYFKNKFSTFYYYWANKILIAFCDLYFEYCNKHAGGFLSLFYNLKKGIHGEKLKNKAPKNLKTFFRWLKKDERWLKIKNKIKEIKKQHPRYEVKEIGLLQMDAKYFVPSKFPVDKKYYVYDFIDEKTRLALGYVYDKLNIDNAIAAVKKAISDFKNIFGVKITRIRTDNGSEFINNYRNNQKNTVKETNFTQFLTDKNIFHQTKPVRSPQSNGKIERFHQNYTKLFVFEEKILNAVSLQNKLNDYYYFYNFERVHKSLNFQTPFNFLNSLSLIK
SIO_010081: SCITRI_RS09385
subclass of: SO_0000673
so part of: SCITRI_RS09385
location: complement(11830..12675)
location: region:11830-12675:-1
so has part: feature:11830-12675:-1:exon

WP_237238125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11830-12675:-1:exon

SCITRI_RS11975
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS11975
old locus tag: SCITRI_001946
so part of: sequence
location: complement(12775..13065)
location: region:12775-13065:-1
so has part: feature:12775-13065:-1:exon
subclass of: SO_0000010

79946551
type: Gene
SIO_000068: ncbigene

position:12775:-1
position: 12775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13065:-1
position: 13065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12775-13065:-1:exon

SCITRI_RS11975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS11975
old locus tag: SCITRI_001946
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKNLIKSMLPSMIRKYVEEGLKNKGIYYDKILKNFINAKDINDLRKYIRRLEQGFYRNIGRDKRRTVNQIGTYKWKQNQAQQFRKKEENIYHNFLK
SIO_010081: SCITRI_RS11975
subclass of: SO_0000673
so part of: SCITRI_RS11975
location: complement(12775..13065)
location: region:12775-13065:-1
so has part: feature:12775-13065:-1:exon

WP_204305194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12775-13065:-1:exon

SCITRI_RS09390
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09390
old locus tag: SCITRI_001947
so part of: sequence
location: complement(13081..14559)
location: region:13081-14559:-1
so has part: feature:13081-14559:-1:exon
subclass of: SO_0000010

54239750
type: Gene
SIO_000068: ncbigene

position:13081:-1
position: 13081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14559:-1
position: 14559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13081-14559:-1:exon

SCITRI_RS09390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09390
old locus tag: SCITRI_001947
inference: COORDINATES: protein motif:HMM:TIGR01547.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: PBSX family phage terminase large subunit
translation: MLNHFTYLLEIPYWLLQNSNVGNKYPFAKKFELVNEINQIGSRHSGKTLSNLEMFAELIKISMLIKEPIFIFASMKMNKDIRDSIFQNIWNTLEKHNIPFSVNLSTHSFTIPNGTKIVCRGLHSATKREKLKAFADLNKYKLVIDWREECDQYNQNDINEIDFALRGSQNKITINTCNPESLKRYIVGYCNQLLPFNEEIMRSKWEQTAYIEKWDMKIIIHYTNWRLNSFLPKEEENKILRLEQLDPERARVWSWGLPGNTSGSIFARYLDIMQATDIIQPTKLLGGVDLANSTSPKGHTTAASFWLYNSFDKKAYKVAEYTHSNATQQFKGPLEQVKDILEFYNNQLNQYFNLIQQGISINVDDSAYATLESLNREKYNYTFGQYMHFKPAQKQKFKIKHRIEAFTMLINTNQLKWLWEKCPVSKNQYELIQWEDKPEAREDKVLDLYDDTFDSDFYALHFELIPMVKHNSIWTLYLSFNAGWCLISNKKC
SIO_010081: SCITRI_RS09390
subclass of: SO_0000673
so part of: SCITRI_RS09390
location: complement(13081..14559)
location: region:13081-14559:-1
so has part: feature:13081-14559:-1:exon

WP_071937339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13081-14559:-1:exon

SCITRI_RS09395
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09395
old locus tag: SCITRI_001948
so part of: sequence
location: complement(14552..14959)
location: region:14552-14959:-1
so has part: feature:14552-14959:-1:exon
subclass of: SO_0000010

54239751
type: Gene
SIO_000068: ncbigene

position:14552:-1
position: 14552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14959:-1
position: 14959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14552-14959:-1:exon

SCITRI_RS09395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09395
old locus tag: SCITRI_001948
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKEFNPKTASLRTFYRKIDEFWQNKSPHKPYTLNDLTNEFNLSRKWRYDTYASEKIVPLLEKQVDRIESEIINFMMKSPDGAKLYWQRAFNYKYSLQEKELEKELNLNNQQPMIVNLQTDIRDIKNDNNKDDKNA
SIO_010081: SCITRI_RS09395
subclass of: SO_0000673
so part of: SCITRI_RS09395
location: complement(14552..14959)
location: region:14552-14959:-1
so has part: feature:14552-14959:-1:exon

WP_071937338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14552-14959:-1:exon

SCITRI_RS09400
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09400
old locus tag: SCITRI_001950
so part of: sequence
location: 15263..16246
location: region:15263-16246:1
so has part: feature:15263-16246:1:exon
subclass of: SO_0000010

54239752
type: Gene
SIO_000068: ncbigene

position:15263:1
position: 15263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16246:1
position: 16246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15263-16246:1:exon

SCITRI_RS09400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09400
old locus tag: SCITRI_001950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004028247.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: IS30 family transposase
translation: MKDYTHLKYDERNLFKDLFLSDSCKKKNGTLNLSEIARQTNRSVNTVKREIKRFKNIEDYTAIEAQKDYYKKRKKCIKKLPTFTKEQLNFIHLRFNVYHDSPAEIIQRFLIKFGIKFPACVKTFYKWIFLGLLGLLKKNLLNGGRKNRTKKRPDNRGKLDERFKSIWDIENKESNVGWLEADTVIGKDHKSAVLVLVEQSSKKYFAMKLENHTANEVLEKLEELVRINGLVGKIKGIITDRGKEFSKFEEMEKITGSNVYYCDPGSPKQKPLIERINREFRKRFPKDTDFNNVNQKRIDWVVNVINDKLRPCLNWISAKEMFLQNIK
SIO_010081: SCITRI_RS09400
subclass of: SO_0000673
so part of: SCITRI_RS09400
location: 15263..16246
location: region:15263-16246:1
so has part: feature:15263-16246:1:exon

WP_071937337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15263-16246:1:exon

SCITRI_RS09405
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09405
old locus tag: SCITRI_001951
so part of: sequence
location: 16278..16781
location: region:16278-16781:1
so has part: feature:16278-16781:1:exon
subclass of: SO_0000010

54239753
type: Gene
SIO_000068: ncbigene

position:16278:1
position: 16278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16781:1
position: 16781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16278-16781:1:exon

SCITRI_RS09405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09405
old locus tag: SCITRI_001951
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MLKLIRLLTAALQDTKIGELLKDGLKKYGIIKKETSQFKKLYNWTDPRNILQYLKKATKQEINSLLDKIEKRSLEQGKNLFNEQYQDSKEWVNIQSSWIKYGKFEMTNKIINTGNATFLFQPKVIVQQIINYDNKGSEWLNEKRCLCNTWWACNKCKKTLYGSLWAS
SIO_010081: SCITRI_RS09405
subclass of: SO_0000673
so part of: SCITRI_RS09405
location: 16278..16781
location: region:16278-16781:1
so has part: feature:16278-16781:1:exon

WP_071937336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16278-16781:1:exon

SCITRI_RS09410
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09410
old locus tag: SCITRI_001952
so part of: sequence
location: 16759..16977
location: region:16759-16977:1
so has part: feature:16759-16977:1:exon
subclass of: SO_0000010

54239754
type: Gene
SIO_000068: ncbigene

position:16759:1
position: 16759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16977:1
position: 16977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16759-16977:1:exon

SCITRI_RS09410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09410
old locus tag: SCITRI_001952
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MAVCGQVKKRLCKELKKDNIAICKLSLYNEYIKKYQKVKVCVKVLSNEPSLLTVNIINYALILKLKEQNNNE
SIO_010081: SCITRI_RS09410
subclass of: SO_0000673
so part of: SCITRI_RS09410
location: 16759..16977
location: region:16759-16977:1
so has part: feature:16759-16977:1:exon

WP_071937335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16759-16977:1:exon

SCITRI_RS09415
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09415
old locus tag: SCITRI_001953
so part of: sequence
location: 16970..18364
location: region:16970-18364:1
so has part: feature:16970-18364:1:exon
subclass of: SO_0000010

54239755
type: Gene
SIO_000068: ncbigene

position:16970:1
position: 16970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18364:1
position: 18364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16970-18364:1:exon

SCITRI_RS09415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09415
old locus tag: SCITRI_001953
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MNNNTYPTLPNLNDINSVLKYYNYDWTINLANIIARHQMRLVNGKNILFNSHREDILNKLNWWYETYKIKEKLDKNELTASLMGKTIFGLLETSDGNIDLWINPFNFTSRVSKINEIEQGADIWLNYHQSDSGFILNLICTKDKIVIKGWPKNNEVVVGQSKTQIKDDVKPVLVQEFKNKLGIVPFWEMINEPNPLFLSTSTTLNPWPTMANCYKLQFDLEDSFNIKSKERWANRTHWYGILDDDLMTAYNKGNKKVLQDAFDDIFIQSGQSAVDGQLSQSLQVVQGTPILETYTQDQKSIIEQVYVACHFSSPFGDKSDSEQNKTQSLLTKTKDLEKQAYLQSYRMQYYTKMFDTVLKYYGLWDGSGERPYSFKFISASLVDQMRQNELITARLENKTMEPERAITEYDDVDGLEAAKYFEKVEAWQDKMQSKEIEHNNKLMEYDETGNNQNAIQGRTEIKED
SIO_010081: SCITRI_RS09415
subclass of: SO_0000673
so part of: SCITRI_RS09415
location: 16970..18364
location: region:16970-18364:1
so has part: feature:16970-18364:1:exon

WP_071937334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16970-18364:1:exon

SCITRI_RS09420
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09420
old locus tag: SCITRI_001954
so part of: sequence
location: 18368..19195
location: region:18368-19195:1
so has part: feature:18368-19195:1:exon
subclass of: SO_0000010

54239756
type: Gene
SIO_000068: ncbigene

position:18368:1
position: 18368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19195:1
position: 19195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18368-19195:1:exon

SCITRI_RS09420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09420
old locus tag: SCITRI_001954
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MSRISPGAMNELRAQAHDTLMDIREDIRNNRHWMVFPFNVYSSYIPDTETGWKPNNAKPSDYGSYTRIFDNMESTIAQWQGSLKIVQKYKGEEINILTIDDFKNQPINSTIWANNETPFAIKLKDENENNYWKLIDGENIYDINKMLEYLKQYKLSYFINNDNKADNFYTKEVKVGKYWDAYMIDDRSSIQFGEAKFEQVFTQQSTERQYTLLILDEDAERHRVIEVQQINSERSWFFIEKKHYFILRSLVTKYGKDIVINTVNKIVINNVKENE
SIO_010081: SCITRI_RS09420
subclass of: SO_0000673
so part of: SCITRI_RS09420
location: 18368..19195
location: region:18368-19195:1
so has part: feature:18368-19195:1:exon

WP_071937333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18368-19195:1:exon

SCITRI_RS09425
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09425
so part of: sequence
location: 19299..19415
location: region:19299-19415:1
so has part: feature:19299-19415:1:exon
subclass of: SO_0000010

54239757
type: Gene
SIO_000068: ncbigene

position:19299:1
position: 19299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19415:1
position: 19415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19299-19415:1:exon

SCITRI_RS09425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09425
inference: COORDINATES: protein motif:HMM:NF022497.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MPTWLTTIFSVVIVLAIFLYFGLLIYQKIKQIRGKKKR
SIO_010081: SCITRI_RS09425
subclass of: SO_0000673
so part of: SCITRI_RS09425
location: 19299..19415
location: region:19299-19415:1
so has part: feature:19299-19415:1:exon

WP_237238263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19299-19415:1:exon

SCITRI_RS09430
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09430
old locus tag: SCITRI_001955
so part of: sequence
location: 19449..19700
location: region:19449-19700:1
so has part: feature:19449-19700:1:exon
subclass of: SO_0000010

54239758
type: Gene
SIO_000068: ncbigene

position:19449:1
position: 19449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19700:1
position: 19700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19449-19700:1:exon

SCITRI_RS09430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09430
old locus tag: SCITRI_001955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004027792.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MLGMYLTTAFNFLTAPTPKTMSEGMTGIWTGLTSALWKVKECITNILPEIMIFLGEAWIILIPFAIFCIIKILNFFRVMVKGF
SIO_010081: SCITRI_RS09430
subclass of: SO_0000673
so part of: SCITRI_RS09430
location: 19449..19700
location: region:19449-19700:1
so has part: feature:19449-19700:1:exon

WP_071937332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19449-19700:1:exon

SCITRI_RS09435
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09435
old locus tag: SCITRI_001956
so part of: sequence
location: 20083..20442
location: region:20083-20442:1
so has part: feature:20083-20442:1:exon
subclass of: SO_0000010

54239759
type: Gene
SIO_000068: ncbigene

position:20083:1
position: 20083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20442:1
position: 20442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20083-20442:1:exon

SCITRI_RS09435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09435
old locus tag: SCITRI_001956
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015979232.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MDIKFKTTKECKKLKRDFIIRNFVFGFVYFQFFIVLIEIIVGLVLFSNREIIVGILLFSLFLFLIFILLFFIIQCHICEIKEYKVMLLKKKMLPLENKIGGLGKGTMLRPVRRGDDKIE
SIO_010081: SCITRI_RS09435
subclass of: SO_0000673
so part of: SCITRI_RS09435
location: 20083..20442
location: region:20083-20442:1
so has part: feature:20083-20442:1:exon

WP_071937331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20083-20442:1:exon

SCITRI_RS09440
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09440
old locus tag: SCITRI_001957
so part of: sequence
location: 20426..20875
location: region:20426-20875:1
so has part: feature:20426-20875:1:exon
subclass of: SO_0000010

54239760
type: Gene
SIO_000068: ncbigene

position:20426:1
position: 20426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20875:1
position: 20875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20426-20875:1:exon

SCITRI_RS09440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09440
old locus tag: SCITRI_001957
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015967971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: DUF3627 domain-containing protein
translation: MIKLSNFVKKNQNVENYFISKEFIPFTTEKASFINLPNHNRHIGFWLSNKFIYPSEKHLEQVAIGLIYDNSYPIVKYDENLKRNIWKYLTGTELINLYNQYKQNYFTKMKKALFSSEPKKVKTNNNNNNLTNWSVEKEQELINDLKDLN
SIO_010081: SCITRI_RS09440
subclass of: SO_0000673
so part of: SCITRI_RS09440
location: 20426..20875
location: region:20426-20875:1
so has part: feature:20426-20875:1:exon

WP_071937330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20426-20875:1:exon

SCITRI_RS09445
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09445
old locus tag: SCITRI_001959
so part of: sequence
location: 21028..21231
location: region:21028-21231:1
so has part: feature:21028-21231:1:exon
subclass of: SO_0000010

54239761
type: Gene
SIO_000068: ncbigene

position:21028:1
position: 21028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21231:1
position: 21231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21028-21231:1:exon

SCITRI_RS09445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09445
old locus tag: SCITRI_001959
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004027613.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: DUF2649 family protein
translation: MQNDLIKLKEFFIHIFLFIDKTNVESITMWNLTQNEYLTLMVGVWVVILFLTWFFLWMVFKIVSYFK
SIO_010081: SCITRI_RS09445
subclass of: SO_0000673
so part of: SCITRI_RS09445
location: 21028..21231
location: region:21028-21231:1
so has part: feature:21028-21231:1:exon

WP_071937329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21028-21231:1:exon

SCITRI_RS09450
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09450
old locus tag: SCITRI_001960
so part of: sequence
location: 21425..22438
location: region:21425-22438:1
so has part: feature:21425-22438:1:exon
subclass of: SO_0000010

54239762
type: Gene
SIO_000068: ncbigene

position:21425:1
position: 21425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22438:1
position: 22438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21425-22438:1:exon

SCITRI_RS09450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09450
old locus tag: SCITRI_001960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015967975.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKFIFFFKNYCYISGSMLLFSLIDLLLWIISLYCVGLVFWILFALQCVYFVWWLWKNIFYQLNSFGLVNFVWDNPLSVIIGKLGTGKTLLLTYLSQTMKLLTDEIYSNYPLKDDKVKVLTFKNLDFTDRTKPVPLDDSVILFDESYLYIDGTSPHDEKKVHSGKIPWIVLARHFGHRALFTAQREGMIWNNIRQLASGIIIPISLKKPVIKKGFNFFNRFFIMRIGIFQDITDYEIWKTKSVERTAEGKRVKHKSDIGLGIRFFKIIIPLEFANKYDSQWLKFVRDLKNDEIVNKKEYYWSEITKLSVKERLELFDIDILKKNLKPKKEKGNSKDD
SIO_010081: SCITRI_RS09450
subclass of: SO_0000673
so part of: SCITRI_RS09450
location: 21425..22438
location: region:21425-22438:1
so has part: feature:21425-22438:1:exon

WP_071937328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21425-22438:1:exon

SCITRI_RS09455
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09455
old locus tag: SCITRI_001961
so part of: sequence
location: 22431..22808
location: region:22431-22808:1
so has part: feature:22431-22808:1:exon
subclass of: SO_0000010

54239763
type: Gene
SIO_000068: ncbigene

position:22431:1
position: 22431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22808:1
position: 22808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22431-22808:1:exon

SCITRI_RS09455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09455
old locus tag: SCITRI_001961
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015988083.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MINLLVENNNSNWDKIFSFVFDIFLFIFDVIWNTKLPMTNTSIAYFLIFFMVIKLSIYAIHGTSTQYNNLGSTVNNGVSQVYSSTVRKGINVGKNVYQNSNKQQVKREIKRQNVRQQAKFKRGVK
SIO_010081: SCITRI_RS09455
subclass of: SO_0000673
so part of: SCITRI_RS09455
location: 22431..22808
location: region:22431-22808:1
so has part: feature:22431-22808:1:exon

WP_071937327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22431-22808:1:exon

SCITRI_RS09460
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09460
old locus tag: SCITRI_001962
so part of: sequence
location: 22808..23044
location: region:22808-23044:1
so has part: feature:22808-23044:1:exon
subclass of: SO_0000010

54239764
type: Gene
SIO_000068: ncbigene

position:23044:1
position: 23044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22808-23044:1:exon

SCITRI_RS09460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09460
old locus tag: SCITRI_001962
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004028734.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MIKLVLLVAAIAIFGTGFITVIINQFTSAKNIIMDLYNSDTWLIWLFGRMAVLFSHPLMLTISSLYIVGFIVSKTLYS
SIO_010081: SCITRI_RS09460
subclass of: SO_0000673
so part of: SCITRI_RS09460
location: 22808..23044
location: region:22808-23044:1
so has part: feature:22808-23044:1:exon

WP_015967964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22808-23044:1:exon

SCITRI_RS09465
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09465
pseudo: true
so part of: sequence
location: 23056..25173
location: region:23056-25173:1
so has part: feature:23056-25173:1:exon
subclass of: SO_0000010

54239765
type: Gene
SIO_000068: ncbigene

position:23056:1
position: 23056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25173:1
position: 25173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23056-25173:1:exon

SCITRI_RS09465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015967966.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 4
product: DUF3688 family protein
SIO_010081: SCITRI_RS09465
subclass of: SO_0000673
so part of: SCITRI_RS09465
location: 23056..25173
location: region:23056-25173:1
so has part: feature:23056-25173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23056-25173:1:exon

SCITRI_RS10440
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS10440
old locus tag: SCITRI_001967
so part of: sequence
location: 25450..25614
location: region:25450-25614:1
so has part: feature:25450-25614:1:exon
subclass of: SO_0000010

54239931
type: Gene
SIO_000068: ncbigene

position:25450:1
position: 25450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25614:1
position: 25614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25450-25614:1:exon

SCITRI_RS10440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS10440
old locus tag: SCITRI_001967
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MCCWLSGSSGLLSSSFIIILFLQLISVVVLVAVNPIYAKSFFHLDCLLLLFYIY
SIO_010081: SCITRI_RS10440
subclass of: SO_0000673
so part of: SCITRI_RS10440
location: 25450..25614
location: region:25450-25614:1
so has part: feature:25450-25614:1:exon

WP_157092893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25450-25614:1:exon

SCITRI_RS09470
type: Gene
subclass of: SO_0000704
RO_0002162: 2133
locus tag: SCITRI_RS09470
pseudo: true
so part of: sequence
location: 25697..>26180
location: region:25697-26180:1
so has part: feature:25697-26180:1:exon
subclass of: SO_0000010

54239766
type: Gene
SIO_000068: ncbigene

position:25697:1
position: 25697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26180:1
position: 26180
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25697-26180:1:exon

SCITRI_RS09470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2133
locus tag: SCITRI_RS09470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612212.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 4
product: helix-turn-helix domain-containing protein
SIO_010081: SCITRI_RS09470
subclass of: SO_0000673
so part of: SCITRI_RS09470
location: 25697..>26180
location: region:25697-26180:1
so has part: feature:25697-26180:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25697-26180:1:exon