Mesomycoplasma neurolyticum strain NCTC10166 plasmid 3.
type: Entry
definition: Mesomycoplasma neurolyticum strain NCTC10166 plasmid 3.
sequence version: NZ_LR214953.1
sequence date: 2023-03-23
sequence: sequence
division: CON
label: NZ_LR214953.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA4412700
keyword: RefSeq
source: Mesomycoplasma neurolyticum (Mycoplasma neurolyticum)
organism: Mesomycoplasma neurolyticum
taxonomy: Bacteria; Mycoplasmatota; Mollicutes; Mycoplasmataceae; Mesomycoplasma.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR214953.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/23/2023 03:45:55\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 907\nCDSs (total) :: 871\nGenes (coding) :: 859\nCDSs (with protein) :: 859\nGenes (RNA) :: 36\nrRNAs :: 2, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 1, 1 (5S, 16S, 23S)\ntRNAs :: 30\nncRNAs :: 2\nPseudo Genes (total) :: 12\nCDSs (without protein) :: 12\nPseudo Genes (ambiguous residues) :: 0 of 12\nPseudo Genes (frameshifted) :: 5 of 12\nPseudo Genes (incomplete) :: 7 of 12\nPseudo Genes (internal stop) :: 0 of 12\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 14565
topology: linear
so has quality: SO_0000987
location: 1..14565
location: region:1-14565:1
RO_0002162: 2120

NZ_LR214953
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA4412700
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
journal: Submitted (24-JAN-2019) WTSI, Pathogen Informatics, Wellcome Trust Sanger Institute, CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14565:1
position: 14565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-14565:1:source
so part of: sequence
organism: Mesomycoplasma neurolyticum
mol type: genomic DNA
strain: NCTC10166
serovar: not available: to be reported later
isolation source: Brain
host: Mouse
culture collection: NCTC:10166
type material: type strain of Mycoplasma neurolyticum
plasmid: 3
collection date: 1938

2120
type: Taxonomy
SIO_000068: taxonomy

EXC65_RS04225
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04225
so part of: sequence
location: complement(<1..828)
location: region:1-828:-1
so has part: feature:1-828:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:828:-1
position: 828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-828:-1:exon

EXC65_RS04225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04225
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MIFDGIINGIVYGVFSIFWYILVWFPYTILKITFSTFQYLGFPIVKKILFGSENQNENWKNVPTSYWAMGIIAIVLLIVVMIAVIFKFIAKHRHNNEESNVLIKALKKLLPSISLLVLIPFLTFAFIIILQIFLDLLFIAINGQKIGLAESLFISNKPDKIESQTWSEIATTKKPFSVISINTYSTFNWGEGVQTIIFLSISGILILYGMIKLLFVYAVKIVEIFWLFISSPIFSVWSIYDNGEKFKTWKNIYLGKFFMLLYYQVALGLLMIWIGV
SIO_010081: EXC65_RS04225
subclass of: SO_0000673
so part of: EXC65_RS04225
location: complement(<1..828)
location: region:1-828:-1
so has part: feature:1-828:-1:exon

WP_129720245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-828:-1:exon

EXC65_RS04230
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04230
old locus tag: NCTC10166_00869
so part of: sequence
location: complement(830..1153)
location: region:830-1153:-1
so has part: feature:830-1153:-1:exon
subclass of: SO_0000010

position:830:-1
position: 830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153:-1
position: 1153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830-1153:-1:exon

EXC65_RS04230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04230
old locus tag: NCTC10166_00869
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKFLQYLNDTTTGGFNTPSGKAPEVIKTLAEEASNWIYYFLTISIPVVAIIFISAIVIFSTLMSTSTDQEKRSFYKKSLKIVLISLVIVIVAIASIPIVLAKIGGLI
SIO_010081: EXC65_RS04230
subclass of: SO_0000673
so part of: EXC65_RS04230
location: complement(830..1153)
location: region:830-1153:-1
so has part: feature:830-1153:-1:exon

WP_129719865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:830-1153:-1:exon

EXC65_RS04235
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04235
old locus tag: NCTC10166_00871
so part of: sequence
location: complement(1439..2542)
location: region:1439-2542:-1
so has part: feature:1439-2542:-1:exon
subclass of: SO_0000010

position:1439:-1
position: 1439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2542:-1
position: 2542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1439-2542:-1:exon

EXC65_RS04235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04235
old locus tag: NCTC10166_00871
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKNLKKKVMISHVKKFFLFCNLLVIPTVFVLLSSSCWKGLLKEPNKSSENIENTPPSSPPSSVTPEPKTPTAKVQNQYLTEEMPIPDFYVYETLEKNWEWAKELENIVNKNNPTLSKEERISKIVEIYKKALDKIGYEISDKKTNTIFEKIDSDLDKISKNGLEKDTKYAFQLISNKNRLFDDGYLSTILDENDKSWWLSIYADGALYWKTSPIIFSIIRNYIKLKIIFYEEIRGSYRDDILEKLKNNKNLENIFQQLNQSVSAYIDPINHYSYNEQYVFSNFSPFYKKLYIELINWYNKEIAPLQIKLGLKTNNPLTKWQYDEHVTKYFYPLINTTIKTNYTTSEIDAFYEEWERKNSIKYSWRIY
SIO_010081: EXC65_RS04235
subclass of: SO_0000673
so part of: EXC65_RS04235
location: complement(1439..2542)
location: region:1439-2542:-1
so has part: feature:1439-2542:-1:exon

WP_165001331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1439-2542:-1:exon

EXC65_RS04240
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04240
old locus tag: NCTC10166_00872
so part of: sequence
location: complement(2502..3281)
location: region:2502-3281:-1
so has part: feature:2502-3281:-1:exon
subclass of: SO_0000010

position:2502:-1
position: 2502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3281:-1
position: 3281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2502-3281:-1:exon

EXC65_RS04240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04240
old locus tag: NCTC10166_00872
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MSTNLPKMKPMFTKNTKYEITFDRFEGPIKHRPIVIFRDEYAEITEDGKIIEKYYYIKARSAHDENGNRKKANKGEIFLEKATIGLLTNDSYVDTTQIYSIKKEELNNIVDRKNVIFASTNDLTKYQIDKIYRSVLENLTQEPPYVSFMDVKLNNKTNAFVGELKYSHEYFLDQDYFESSRKDKKKFMANILNKKNLIEETLIELRNLKNGVREEFLDLLREWSYERKLKKEKIEQKRLQNIGDEKNEEFEKEGDDFTR
SIO_010081: EXC65_RS04240
subclass of: SO_0000673
so part of: EXC65_RS04240
location: complement(2502..3281)
location: region:2502-3281:-1
so has part: feature:2502-3281:-1:exon

WP_129719867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2502-3281:-1:exon

EXC65_RS04245
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04245
old locus tag: NCTC10166_00873
so part of: sequence
location: complement(3396..3764)
location: region:3396-3764:-1
so has part: feature:3396-3764:-1:exon
subclass of: SO_0000010

position:3396:-1
position: 3396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3764:-1
position: 3764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3396-3764:-1:exon

EXC65_RS04245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04245
old locus tag: NCTC10166_00873
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKGVKIFLEANLNVVEEVIKNKKTFSFMLQAKAIELLETKEQIENRKNKNNLNTTYCDWTTNEELIKKIEDPIEETNSEPKKEETNKSSIEHLFGTKYPKDINENTYKTFNYDVDEIFKNNK
SIO_010081: EXC65_RS04245
subclass of: SO_0000673
so part of: EXC65_RS04245
location: complement(3396..3764)
location: region:3396-3764:-1
so has part: feature:3396-3764:-1:exon

WP_165001361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3396-3764:-1:exon

EXC65_RS04250
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04250
old locus tag: NCTC10166_00875
so part of: sequence
location: complement(4740..4991)
location: region:4740-4991:-1
so has part: feature:4740-4991:-1:exon
subclass of: SO_0000010

position:4740:-1
position: 4740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4991:-1
position: 4991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4740-4991:-1:exon

EXC65_RS04250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04250
old locus tag: NCTC10166_00875
inference: COORDINATES: protein motif:HMM:NF024108.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: TraM recognition domain-containing protein
translation: MQDLNQLAKYKNDKKIIENNTNLTIFLNSSDHETLKKTSEILGQSNVVKTSFSNSKNDKSKSSTDSLSNKPLVSIEELKKYFT
SIO_010081: EXC65_RS04250
subclass of: SO_0000673
so part of: EXC65_RS04250
location: complement(4740..4991)
location: region:4740-4991:-1
so has part: feature:4740-4991:-1:exon

WP_165001362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4740-4991:-1:exon

EXC65_RS04255
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04255
old locus tag: NCTC10166_00876
so part of: sequence
location: complement(4966..5697)
location: region:4966-5697:-1
so has part: feature:4966-5697:-1:exon
subclass of: SO_0000010

position:4966:-1
position: 4966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5697:-1
position: 5697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4966-5697:-1:exon

EXC65_RS04255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04255
old locus tag: NCTC10166_00876
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MNKLERESLAFSLLADVIESLDDWNTSGDNKFWSDSSKNCLKIIGKFMLYYSTIDKNFKKQHFNLASFNQFLSYKEFSKGKWINILQNSQSQEIKNFFLSEVKPLIENNDRTLTSQLSGAVNAIVKFNNDLAIKSWSCRHNIEIEKIILDSHLDNGKPFAIFIKFPDHKKDRHRYISILIDQIYQTAIDIANASKNQKLKRTLLFLVMSLVICLLLKILTIKLLLREVEIFSFHCFARFKPIS
SIO_010081: EXC65_RS04255
subclass of: SO_0000673
so part of: EXC65_RS04255
location: complement(4966..5697)
location: region:4966-5697:-1
so has part: feature:4966-5697:-1:exon

WP_232018856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4966-5697:-1:exon

EXC65_RS04690
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04690
so part of: sequence
location: complement(6047..6175)
location: region:6047-6175:-1
so has part: feature:6047-6175:-1:exon
subclass of: SO_0000010

position:6047:-1
position: 6047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6175:-1
position: 6175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6047-6175:-1:exon

EXC65_RS04690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04690
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MIFFKFKKNKNKFEKLEEGGASFLWDEPNKKGSFSEFSKIYF
SIO_010081: EXC65_RS04690
subclass of: SO_0000673
so part of: EXC65_RS04690
location: complement(6047..6175)
location: region:6047-6175:-1
so has part: feature:6047-6175:-1:exon

WP_276310803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6047-6175:-1:exon

EXC65_RS04260
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04260
old locus tag: NCTC10166_00877
so part of: sequence
location: complement(6399..6614)
location: region:6399-6614:-1
so has part: feature:6399-6614:-1:exon
subclass of: SO_0000010

position:6399:-1
position: 6399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6614:-1
position: 6614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6399-6614:-1:exon

EXC65_RS04260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04260
old locus tag: NCTC10166_00877
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MILKYKNEKTLKLFLLNKKQVNAFYEQVKKNDEIKLIITKKNNHTFISKILKINNKDFSSAKENDELVYER
SIO_010081: EXC65_RS04260
subclass of: SO_0000673
so part of: EXC65_RS04260
location: complement(6399..6614)
location: region:6399-6614:-1
so has part: feature:6399-6614:-1:exon

WP_129719973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6399-6614:-1:exon

EXC65_RS04265
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
gene: dnaG
locus tag: EXC65_RS04265
old locus tag: NCTC10166_00878
so part of: sequence
location: complement(6650..7837)
location: region:6650-7837:-1
so has part: feature:6650-7837:-1:exon
subclass of: SO_0000010

position:6650:-1
position: 6650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7837:-1
position: 7837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6650-7837:-1:exon

EXC65_RS04265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
gene: dnaG
locus tag: EXC65_RS04265
old locus tag: NCTC10166_00878
inference: COORDINATES: protein motif:HMM:NF019880.2
GO function: GO:0003896 - DNA primase activity [Evidence IEA]
GO process: GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: DNA primase
translation: MKINQDKNKNNIFNFSIVDVAQEFFKLIKQGSNFKVICPFHGDKNASLIISPSKNIWKCFGCNKGGNAIELVKEYQKIDTKQAIEWLTNKFHIISLKKHQFKKPENDFQTNEKEIINVNSLATILFKVNLLSEINENILLKTFLNKRKLNNNIIQKFDIGYNSNNAKFKNFLINVKKIPKDILINSSLLTENENSFFINRIIFPIKNEFNEIVGFAGRTLDNNSNFPKYLNSKENSVFNKNKILLNWFNAKNNEEIILTEGYMDVLAFERNQIYNSVALMGINLSNHHIKILKNKQITLALDSDEAGKQATYEIIKKLFKNNFQNIYVIDFLNFKDADEFSMDNDLKNAYQKKLHYLNWLNLNHYKTDDLKSKKTINYANEKSISISAKLKYIQK
SIO_010081: EXC65_RS04265
subclass of: SO_0000673
so part of: EXC65_RS04265
location: complement(6650..7837)
location: region:6650-7837:-1
so has part: feature:6650-7837:-1:exon

WP_129720248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6650-7837:-1:exon

EXC65_RS04270
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
gene: mobL
locus tag: EXC65_RS04270
old locus tag: NCTC10166_00879
so part of: sequence
location: complement(7857..9026)
location: region:7857-9026:-1
so has part: feature:7857-9026:-1:exon
subclass of: SO_0000010

position:7857:-1
position: 7857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9026:-1
position: 9026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7857-9026:-1:exon

EXC65_RS04270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
gene: mobL
locus tag: EXC65_RS04270
old locus tag: NCTC10166_00879
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: relaxase MobL
translation: MQSSVFKITRFAKGTNEYYKKGKVIDYITRPSAVYKSTKTSNEILALVNEQTQLEKVLNSLVNEQSSINSGLFKIKNKKANLIAVEKAKNIYKKLKKEQLIWDAVLSFEYERMKNANIVSQQEYADFLASNFEYFLKSEKFNLKNLDILFAIHTNTKHPHFHILFSEKMPTTWNYKQKKFKFRSKGSLEIENIKKFQKYLDMKLLHKKDYETLWNIKKEVFEIKTEIKHEPIFKVMFNEQNNFYDDLQKIKKYYKNNKKPTFNLAPKEIQESVIAIKDYLLKNNELFFKKVNIFQQKLDTLQELEIDKIFDEEKTEFINNQLNEFNNQLNNQILKNAAFLNEKIIAKLKSSKFHEKTLLKKIIKKLTWMPYKIYQIKKSFDKGYDLIND
SIO_010081: EXC65_RS04270
subclass of: SO_0000673
so part of: EXC65_RS04270
location: complement(7857..9026)
location: region:7857-9026:-1
so has part: feature:7857-9026:-1:exon

WP_129719871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7857-9026:-1:exon

EXC65_RS04275
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04275
old locus tag: NCTC10166_00880
so part of: sequence
location: complement(9029..9331)
location: region:9029-9331:-1
so has part: feature:9029-9331:-1:exon
subclass of: SO_0000010

position:9029:-1
position: 9029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9331:-1
position: 9331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9029-9331:-1:exon

EXC65_RS04275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04275
old locus tag: NCTC10166_00880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKIEITNFFLISKQSENDYKQVAMFSIIVNFGTRHKSFFVKLNKLSLYKNKHDFFVFNPLIVKSENDKKDFYFNFSWEMSKYILEKAKQRYESEIQLVKK
SIO_010081: EXC65_RS04275
subclass of: SO_0000673
so part of: EXC65_RS04275
location: complement(9029..9331)
location: region:9029-9331:-1
so has part: feature:9029-9331:-1:exon

WP_129719872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9029-9331:-1:exon

EXC65_RS04280
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04280
old locus tag: NCTC10166_00881
so part of: sequence
location: complement(9331..10293)
location: region:9331-10293:-1
so has part: feature:9331-10293:-1:exon
subclass of: SO_0000010

position:10293:-1
position: 10293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9331-10293:-1:exon

EXC65_RS04280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04280
old locus tag: NCTC10166_00881
inference: COORDINATES: protein motif:HMM:NF019997.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: zincin-like metallopeptidase domain-containing protein
translation: MKNLNKLLDERKKIVEQIIKNLKTHNYFWDKNFVAMYPLNFVSNKNYNGTNILRLQLFSEMKNIQDPRFLTFKQILNRPNLKLKKGAKGCSIEYWGIKQLDESEIENNGKKQKTNYFFGKTYYVFNAKDVENIPKYKNKFVEVSSDKRVDYLIENLSKALELKVYDNVLTETPHFSPNQDYIQMPTTFVSPEAKIAVFFHELTHWTGHKDRLNRTSIESYSKNIKTRAIEELVAELGAIFLNSKFGFQTKKIQDNNYAYIQSWIKILEDNPNELFKAANKANEAVEYISQKLEKYLDTKKNEKQIIDNSDFLAQDEGLVH
SIO_010081: EXC65_RS04280
subclass of: SO_0000673
so part of: EXC65_RS04280
location: complement(9331..10293)
location: region:9331-10293:-1
so has part: feature:9331-10293:-1:exon

WP_129719873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9331-10293:-1:exon

EXC65_RS04285
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04285
old locus tag: NCTC10166_00882
so part of: sequence
location: complement(10277..10483)
location: region:10277-10483:-1
so has part: feature:10277-10483:-1:exon
subclass of: SO_0000010

position:10277:-1
position: 10277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10483:-1
position: 10483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10277-10483:-1:exon

EXC65_RS04285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04285
old locus tag: NCTC10166_00882
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKEFNFDSNYKSKKKWNDNDLINFEKDLDNAFFEFYKNPTFKNAEKFKNFLTSFGFEFEEGLKNEKFK
SIO_010081: EXC65_RS04285
subclass of: SO_0000673
so part of: EXC65_RS04285
location: complement(10277..10483)
location: region:10277-10483:-1
so has part: feature:10277-10483:-1:exon

WP_129719874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10277-10483:-1:exon

EXC65_RS04290
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04290
old locus tag: NCTC10166_00884
so part of: sequence
location: complement(10690..11532)
location: region:10690-11532:-1
so has part: feature:10690-11532:-1:exon
subclass of: SO_0000010

position:10690:-1
position: 10690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11532:-1
position: 11532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10690-11532:-1:exon

EXC65_RS04290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04290
old locus tag: NCTC10166_00884
inference: COORDINATES: protein motif:HMM:NF013235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: replication initiation protein
translation: MATSLESEVVFLLNLNEFENKFVPTSIVHKLYIQKERPSLVMLKIFFYSCFLYITNHDKNKILKFKFSRLFLKSLKVDRTDLLRQISKAGFDAASIFSISQKTENITKKKMLIESFQYNEKTKMIEIEFTKYIDDYLNLGHFKKFNLSNLVKFKSSLSFWFFQEMENRSYSEKIDTWISLKNFVNILGVKTDAYKNLSDFKKYVIDVVVKDYQKIAKTNFWKLMIHFTRLQKKAKHLTFILFLIIISFKMKQNFLISSFIANVVDHSQKCSGSLAKKCFF
SIO_010081: EXC65_RS04290
subclass of: SO_0000673
so part of: EXC65_RS04290
location: complement(10690..11532)
location: region:10690-11532:-1
so has part: feature:10690-11532:-1:exon

WP_165001363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10690-11532:-1:exon

EXC65_RS04295
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04295
old locus tag: NCTC10166_00885
so part of: sequence
location: complement(11930..13135)
location: region:11930-13135:-1
so has part: feature:11930-13135:-1:exon
subclass of: SO_0000010

position:11930:-1
position: 11930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13135:-1
position: 13135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11930-13135:-1:exon

EXC65_RS04295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04295
old locus tag: NCTC10166_00885
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MEKIVLNWTSEKGINSFVKWIQYEDEKFLNSELRKQLGYIIHSKRTKSFKIKDGESEIQLTKYKYYKNDKWNYGYAPHLIFEKGTIITPELKKAILQNVKMGLSYRNIVKKYNNIISIGYITYLMKKVEIKTTKLDIHSKENNGYLYMHIDDAYQDLIDENNKKSKFRTRAMYFHLVEKNNKKKVFATSLLVNTSKTNTSKKFVDFTIKSIKKHIKENYDLNLKLVIYGDGAKYMKTISKHLNAIYILDWFHVTKLLLKTVGYGKYNTENKKYFDYFRKISNITLYKKIKNLIRENDSKNAIFILKNVVKKLWNIKLNSIKKRNIPNKVLEIYKFIQYLIFNKKALNFYNQVMDIGSKTETMISHFIKKNTTKKFAIFSLDVFKKLIFLNQKNTKSVKFIN
SIO_010081: EXC65_RS04295
subclass of: SO_0000673
so part of: EXC65_RS04295
location: complement(11930..13135)
location: region:11930-13135:-1
so has part: feature:11930-13135:-1:exon

WP_129719860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11930-13135:-1:exon

EXC65_RS04300
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04300
old locus tag: NCTC10166_00886
so part of: sequence
location: complement(13241..13519)
location: region:13241-13519:-1
so has part: feature:13241-13519:-1:exon
subclass of: SO_0000010

position:13241:-1
position: 13241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13519:-1
position: 13519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13241-13519:-1:exon

EXC65_RS04300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04300
old locus tag: NCTC10166_00886
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MYNSAELNIINNMLKADDSTYDPYSDPGLENDAIEKIVKNNKNQAISKNINKSIDKKKLMWIIPLAIVLTILTFGIVIWIYYRFGPGKKIKK
SIO_010081: EXC65_RS04300
subclass of: SO_0000673
so part of: EXC65_RS04300
location: complement(13241..13519)
location: region:13241-13519:-1
so has part: feature:13241-13519:-1:exon

WP_129720250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13241-13519:-1:exon

EXC65_RS04305
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04305
old locus tag: NCTC10166_00887
so part of: sequence
location: complement(13498..13956)
location: region:13498-13956:-1
so has part: feature:13498-13956:-1:exon
subclass of: SO_0000010

position:13498:-1
position: 13498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13956:-1
position: 13956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13498-13956:-1:exon

EXC65_RS04305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04305
old locus tag: NCTC10166_00887
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MDSKFKYNDHWKITNLSDAVKKAISKVYKFKDTEYKEYYLNLEVIQNNENLIGKKTIVLVNLVDNLEVPSEQNLATLKLKTIKANISNKDKLKAKIIEDLNKQLKNYNLNFEQYLIIENWDKILELLTTENQINKIKVLLNLKTLLCTILQS
SIO_010081: EXC65_RS04305
subclass of: SO_0000673
so part of: EXC65_RS04305
location: complement(13498..13956)
location: region:13498-13956:-1
so has part: feature:13498-13956:-1:exon

WP_129720251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13498-13956:-1:exon

EXC65_RS04505
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04505
old locus tag: NCTC10166_00888
so part of: sequence
location: complement(14168..>14565)
location: region:14168-14565:-1
so has part: feature:14168-14565:-1:exon
subclass of: SO_0000010

position:14168:-1
position: 14168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14565:-1
position: 14565
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14168-14565:-1:exon

EXC65_RS04505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04505
old locus tag: NCTC10166_00888
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 3
transl table: 4
product: hypothetical protein
translation: VDSNITIDEKNNLKFVFSIKDDTRSLNYQIDKSAKEIIISGLKFKNEEKDYETKIAIHPIVDVEKIKLFAKNTTKANFLTSTLWYKWYLNFDNSDKLISNIEYNEETFEEHFNIIINYKLLEKYKKRILLK
SIO_010081: EXC65_RS04505
subclass of: SO_0000673
so part of: EXC65_RS04505
location: complement(14168..>14565)
location: region:14168-14565:-1
so has part: feature:14168-14565:-1:exon

WP_165001364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14168-14565:-1:exon