Mesomycoplasma neurolyticum strain NCTC10166 plasmid 2.
type: Entry
definition: Mesomycoplasma neurolyticum strain NCTC10166 plasmid 2.
sequence version: NZ_LR214952.1
sequence date: 2023-03-23
sequence: sequence
division: CON
label: NZ_LR214952.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA4412700
keyword: RefSeq
source: Mesomycoplasma neurolyticum (Mycoplasma neurolyticum)
organism: Mesomycoplasma neurolyticum
taxonomy: Bacteria; Mycoplasmatota; Mollicutes; Mycoplasmataceae; Mesomycoplasma.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR214952.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/23/2023 03:45:55\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 907\nCDSs (total) :: 871\nGenes (coding) :: 859\nCDSs (with protein) :: 859\nGenes (RNA) :: 36\nrRNAs :: 2, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 1, 1 (5S, 16S, 23S)\ntRNAs :: 30\nncRNAs :: 2\nPseudo Genes (total) :: 12\nCDSs (without protein) :: 12\nPseudo Genes (ambiguous residues) :: 0 of 12\nPseudo Genes (frameshifted) :: 5 of 12\nPseudo Genes (incomplete) :: 7 of 12\nPseudo Genes (internal stop) :: 0 of 12\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 27946
topology: linear
so has quality: SO_0000987
location: 1..27946
location: region:1-27946:1
RO_0002162: 2120

NZ_LR214952
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA4412700
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
journal: Submitted (24-JAN-2019) WTSI, Pathogen Informatics, Wellcome Trust Sanger Institute, CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27946:1
position: 27946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-27946:1:source
so part of: sequence
organism: Mesomycoplasma neurolyticum
mol type: genomic DNA
strain: NCTC10166
serovar: not available: to be reported later
isolation source: Brain
host: Mouse
culture collection: NCTC:10166
type material: type strain of Mycoplasma neurolyticum
plasmid: 2
collection date: 1938

2120
type: Taxonomy
SIO_000068: taxonomy

EXC65_RS04490
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04490
so part of: sequence
location: complement(135..278)
location: region:135-278:-1
so has part: feature:135-278:-1:exon
subclass of: SO_0000010

position:135:-1
position: 135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278:-1
position: 278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135-278:-1:exon

EXC65_RS04490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04490
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MDSAICKFTSLVLSSINEPGSLKAIWPFVPMPRIIKSIPPLSLINLS
SIO_010081: EXC65_RS04490
subclass of: SO_0000673
so part of: EXC65_RS04490
location: complement(135..278)
location: region:135-278:-1
so has part: feature:135-278:-1:exon

WP_165001357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135-278:-1:exon

EXC65_RS04070
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04070
old locus tag: NCTC10166_00833
so part of: sequence
location: 1026..1325
location: region:1026-1325:1
so has part: feature:1026-1325:1:exon
subclass of: SO_0000010

position:1026:1
position: 1026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325:1
position: 1325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026-1325:1:exon

EXC65_RS04070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04070
old locus tag: NCTC10166_00833
inference: COORDINATES: protein motif:HMM:NF012356.2
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: alpha-amylase family glycosyl hydrolase
translation: MQTWNGIKVYMDMVFNHTSLNIRDFKSITNDLKYQNIIIFIQKRNDTIRYKDWEIFINLKTKMQQINDIPQILSRMPDLNLDNFEVIEELKAIQKYWTN
SIO_010081: EXC65_RS04070
subclass of: SO_0000673
so part of: EXC65_RS04070
location: 1026..1325
location: region:1026-1325:1
so has part: feature:1026-1325:1:exon

WP_129720231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1026-1325:1:exon

EXC65_RS04075
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04075
old locus tag: NCTC10166_00834
so part of: sequence
location: 1421..1603
location: region:1421-1603:1
so has part: feature:1421-1603:1:exon
subclass of: SO_0000010

position:1421:1
position: 1421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1603:1
position: 1603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1421-1603:1:exon

EXC65_RS04075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04075
old locus tag: NCTC10166_00834
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MLQSNIKKIGKSTEFYDGWMMKNPQEADKYLTSGANKALDAVYDSTHWKNNWFTYEDVEI
SIO_010081: EXC65_RS04075
subclass of: SO_0000673
so part of: EXC65_RS04075
location: 1421..1603
location: region:1421-1603:1
so has part: feature:1421-1603:1:exon

WP_129720232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1421-1603:1:exon

EXC65_RS04080
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04080
old locus tag: NCTC10166_00835
so part of: sequence
location: 1777..2142
location: region:1777-2142:1
so has part: feature:1777-2142:1:exon
subclass of: SO_0000010

position:1777:1
position: 1777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2142:1
position: 2142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1777-2142:1:exon

EXC65_RS04080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04080
old locus tag: NCTC10166_00835
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MPTKPIIYHGDELGMHANKKFGDPGLREPFKWKNKKYQVEFKEKKSKDKIFLNFSEDIKYVENQVQNKNSIYNTIKFLNQFRKENNFIFQKNNSTINNANNYIDKPNYAANIFIRQNLEKN
SIO_010081: EXC65_RS04080
subclass of: SO_0000673
so part of: EXC65_RS04080
location: 1777..2142
location: region:1777-2142:1
so has part: feature:1777-2142:1:exon

WP_129720233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1777-2142:1:exon

EXC65_RS04620
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04620
old locus tag: NCTC10166_00836
so part of: sequence
location: complement(2666..2767)
location: region:2666-2767:-1
so has part: feature:2666-2767:-1:exon
subclass of: SO_0000010

position:2666:-1
position: 2666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2767:-1
position: 2767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2666-2767:-1:exon

EXC65_RS04620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04620
old locus tag: NCTC10166_00836
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: SAM-dependent methyltransferase
translation: MYLVARKNKPSNEKGIFMINATKEFEASKRQNI
SIO_010081: EXC65_RS04620
subclass of: SO_0000673
so part of: EXC65_RS04620
location: complement(2666..2767)
location: region:2666-2767:-1
so has part: feature:2666-2767:-1:exon

WP_232018851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2666-2767:-1:exon

EXC65_RS04680
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04680
so part of: sequence
location: complement(3148..3237)
location: region:3148-3237:-1
so has part: feature:3148-3237:-1:exon
subclass of: SO_0000010

position:3148:-1
position: 3148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3237:-1
position: 3237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3148-3237:-1:exon

EXC65_RS04680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04680
inference: COORDINATES: protein motif:HMM:NF014442.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: N-6 DNA methylase
translation: MRKDNIKHLENYGQEIKNATYNLARMNFI
SIO_010081: EXC65_RS04680
subclass of: SO_0000673
so part of: EXC65_RS04680
location: complement(3148..3237)
location: region:3148-3237:-1
so has part: feature:3148-3237:-1:exon

WP_276310801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3148-3237:-1:exon

EXC65_RS04625
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04625
old locus tag: NCTC10166_00837
so part of: sequence
location: complement(3242..3442)
location: region:3242-3442:-1
so has part: feature:3242-3442:-1:exon
subclass of: SO_0000010

position:3242:-1
position: 3242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3442:-1
position: 3442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3242-3442:-1:exon

EXC65_RS04625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04625
old locus tag: NCTC10166_00837
inference: COORDINATES: protein motif:HMM:NF014442.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: N-6 DNA methylase
translation: MSMEDVDHFGTTYEHLLSEFASDSGKKAGEFYTPSSVAQLISDIASYNRTKIQSIWSSMWFRFIIN
SIO_010081: EXC65_RS04625
subclass of: SO_0000673
so part of: EXC65_RS04625
location: complement(3242..3442)
location: region:3242-3442:-1
so has part: feature:3242-3442:-1:exon

WP_129720234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3242-3442:-1:exon

EXC65_RS04095
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04095
old locus tag: NCTC10166_00838
so part of: sequence
location: complement(4364..4723)
location: region:4364-4723:-1
so has part: feature:4364-4723:-1:exon
subclass of: SO_0000010

position:4364:-1
position: 4364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4723:-1
position: 4723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4364-4723:-1:exon

EXC65_RS04095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04095
old locus tag: NCTC10166_00838
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKEVVETNKTYSKLKTYPEYDENNKIEGFTIEELKEYLNIVKKVKDTFNERGEKPEEPIDDVTIYIPEEAKYHEVIIDEKYLDNLICFNTDCTKKSFINFDVNEINEQLEKNLQELNIY
SIO_010081: EXC65_RS04095
subclass of: SO_0000673
so part of: EXC65_RS04095
location: complement(4364..4723)
location: region:4364-4723:-1
so has part: feature:4364-4723:-1:exon

WP_129720235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4364-4723:-1:exon

EXC65_RS04100
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04100
old locus tag: NCTC10166_00839
so part of: sequence
location: complement(4732..5217)
location: region:4732-5217:-1
so has part: feature:4732-5217:-1:exon
subclass of: SO_0000010

position:4732:-1
position: 4732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5217:-1
position: 5217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4732-5217:-1:exon

EXC65_RS04100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04100
old locus tag: NCTC10166_00839
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: type I restriction endonuclease subunit R
translation: MENYNKRFKTSFDEINFDKYINDVQYRFKNYKPNEDGIDIVLVVDMLLTGYDSPNTNTLYINKQLSNHNLIQAFSRTNRIYEENKPYGLIINFSVSQNTIDDAFMTYAESTKDDLVDIVYGETYEKVYKYFVDVWQKLKTSVTKVYDFENQNVFLMLQQVI
SIO_010081: EXC65_RS04100
subclass of: SO_0000673
so part of: EXC65_RS04100
location: complement(4732..5217)
location: region:4732-5217:-1
so has part: feature:4732-5217:-1:exon

WP_129720236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4732-5217:-1:exon

EXC65_RS04685
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04685
old locus tag: NCTC10166_00840
so part of: sequence
location: complement(5462..5584)
location: region:5462-5584:-1
so has part: feature:5462-5584:-1:exon
subclass of: SO_0000010

position:5462:-1
position: 5462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5584:-1
position: 5584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5462-5584:-1:exon

EXC65_RS04685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04685
old locus tag: NCTC10166_00840
inference: COORDINATES: protein motif:HMM:NF037510.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MRDAIKDKNVLGFSLRNYYTNDKDSVNYSENEILDFQTII
SIO_010081: EXC65_RS04685
subclass of: SO_0000673
so part of: EXC65_RS04685
location: complement(5462..5584)
location: region:5462-5584:-1
so has part: feature:5462-5584:-1:exon

WP_276310800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5462-5584:-1:exon

EXC65_RS04105
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04105
old locus tag: NCTC10166_00841
so part of: sequence
location: complement(5596..6183)
location: region:5596-6183:-1
so has part: feature:5596-6183:-1:exon
subclass of: SO_0000010

position:5596:-1
position: 5596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6183:-1
position: 6183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5596-6183:-1:exon

EXC65_RS04105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04105
old locus tag: NCTC10166_00841
inference: COORDINATES: protein motif:HMM:NF016724.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: DEAD/DEAH box helicase family protein
translation: MLLRPYQQRAMQKTINFVNNQLKNKLNANININNGYIWHTTGSGKTITSYKIAEILSQNPNIDHVIFLVDRQDLNTQTTKEFRSFISWNENELFEALYQDNSSKLLELLIKKREKLIITTIQKMNKILTNNLNLIQEITNKTFVFIIDECHRSVAGTMGSRIKNNLKNSIMIGFSGTPILKMIVIKKLQTFLVTN
SIO_010081: EXC65_RS04105
subclass of: SO_0000673
so part of: EXC65_RS04105
location: complement(5596..6183)
location: region:5596-6183:-1
so has part: feature:5596-6183:-1:exon

WP_165001358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5596-6183:-1:exon

EXC65_RS04110
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04110
old locus tag: NCTC10166_00842
so part of: sequence
location: complement(6249..6899)
location: region:6249-6899:-1
so has part: feature:6249-6899:-1:exon
subclass of: SO_0000010

position:6249:-1
position: 6249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6899:-1
position: 6899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6249-6899:-1:exon

EXC65_RS04110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04110
old locus tag: NCTC10166_00842
inference: COORDINATES: protein motif:HMM:NF016220.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: type I restriction endonuclease
translation: MKQNEKWYENDFVKKLVEKQEYIKLQGIKDTEGLLKIIFIEIERLNSIKLKEENKQKLKELFTLTKTEKIQFAQWIWNFDTITIPKENSSREQRLKLIDWENWENNNFYVLQQFSTKNKETNKTNIFDSLILINGFPLIFFEFKDKNVKIKKAISDIKNDYKNVLNSDVLRFVQILVASNFEKIKLMSNNDKEEKKLNLTDIQIMEKILIILFKIF
SIO_010081: EXC65_RS04110
subclass of: SO_0000673
so part of: EXC65_RS04110
location: complement(6249..6899)
location: region:6249-6899:-1
so has part: feature:6249-6899:-1:exon

WP_129720238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6249-6899:-1:exon

EXC65_RS04115
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04115
old locus tag: NCTC10166_00843
so part of: sequence
location: complement(6905..7591)
location: region:6905-7591:-1
so has part: feature:6905-7591:-1:exon
subclass of: SO_0000010

position:6905:-1
position: 6905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7591:-1
position: 7591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6905-7591:-1:exon

EXC65_RS04115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04115
old locus tag: NCTC10166_00843
EC number: 3.1.21.-
inference: COORDINATES: protein motif:HMM:NF013579.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: restriction endonuclease subunit S
translation: MFVSRFLKLFKTFSNGSIIDIIEPLEKQLNLIKNQINLFKKQQNLYSKKLLSNFEGIYKLSKLVEFLKGKNIKQSETLKDGKFNVYSSKTKDNGIFGKLNTFIFDGEYILITSHGAYAGTVIYVNEKFSTTSNCFVLKPDNSIVNTKFLFYLLKMKQPDLNTIAKGSAQGFLSNNDLSYFDINIPSLETQNLLISIIEPLYKKIELLEQKEKILIKRFNYYKNILIKG
SIO_010081: EXC65_RS04115
subclass of: SO_0000673
so part of: EXC65_RS04115
location: complement(6905..7591)
location: region:6905-7591:-1
so has part: feature:6905-7591:-1:exon

WP_129719505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6905-7591:-1:exon

EXC65_RS04120
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04120
so part of: sequence
location: 7833..8102
location: region:7833-8102:1
so has part: feature:7833-8102:1:exon
subclass of: SO_0000010

position:7833:1
position: 7833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8102:1
position: 8102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7833-8102:1:exon

EXC65_RS04120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04120
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MYQRNYAIKPKKLFFTTFWTIQNFIQQLRNQSNGSVIKYLKLNQIKNIKILDVSLENELEKIYILLNTLILIKNKINKILNLKIKLLVK
SIO_010081: EXC65_RS04120
subclass of: SO_0000673
so part of: EXC65_RS04120
location: 7833..8102
location: region:7833-8102:1
so has part: feature:7833-8102:1:exon

WP_129719503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7833-8102:1:exon

EXC65_RS04125
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04125
old locus tag: NCTC10166_00844
so part of: sequence
location: complement(8138..9268)
location: region:8138-9268:-1
so has part: feature:8138-9268:-1:exon
subclass of: SO_0000010

position:8138:-1
position: 8138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9268:-1
position: 9268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8138-9268:-1:exon

EXC65_RS04125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04125
old locus tag: NCTC10166_00844
EC number: 3.1.21.-
inference: COORDINATES: protein motif:HMM:NF013579.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: restriction endonuclease subunit S
translation: MAIYKLGDIVKIKRGDPKLAGKHLKKIQGKYPLIAGTGQNNGIISYINHWKFKKGITISRVGTAGKVFYHNYKFNINSVAYFLDIISKQNINEKYLFFLLKTKEQLIISKLSGSAQRHLKSSVLLNISINIPPLNTQNSIIDIIEPHEELFLRHNHLVRIDTIENAEKDIKTLIDIIEPIEQLKNTINKIKLILKKHLILIYKLNQSSKEPIKNQIIIKNKKYKNEKFYCPTSLVSELSLNKENLILLDQTKKPSRADLTIEDNSFIFSKIIGENKLMIFSKAPNIVFSTGFFNIKSKNETNDHLLSFLLSNDFIYQKNQLQTGTLMQSLNKENLNKIFIKKDILYSNNLFSQLSNLINLEKNINSILKKILKIFI
SIO_010081: EXC65_RS04125
subclass of: SO_0000673
so part of: EXC65_RS04125
location: complement(8138..9268)
location: region:8138-9268:-1
so has part: feature:8138-9268:-1:exon

WP_129719502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8138-9268:-1:exon

EXC65_RS04130
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04130
old locus tag: NCTC10166_00845
so part of: sequence
location: complement(9269..10414)
location: region:9269-10414:-1
so has part: feature:9269-10414:-1:exon
subclass of: SO_0000010

position:9269:-1
position: 9269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10414:-1
position: 10414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9269-10414:-1:exon

EXC65_RS04130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04130
old locus tag: NCTC10166_00845
EC number: 3.1.21.-
inference: COORDINATES: protein motif:HMM:NF013579.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: restriction endonuclease subunit S
translation: MKQIQNTNIFKLEEIAKFYLGKILKKPTESKGEYPLISSTSKNDGIIGKVETFNFQNCITLPRLGIEDNIFITLRKYKFSATSHLIIVKPNKNIVILDFLYLLLKSLNAKISQYAIEGDLIKRLSLKKLKSLKLSIPELSIQKEIVQNWKKTNESLVFFEKFFENPIFQINNLLVKTLNYVMNKSNKQNYLLSDLLDKQKPYKMGKINFESDDKKNNLYILTYKSFKNNNLNDKMTFYDEKLESFFANKNDVFFTRFPEPSFGIQNIYEENSAVFDSSLVKLNIDETKIQKDFFKYFNYSNFWLNWKQKNKTSTLLGGINFLTILNLTLSLPTLANQQKMILIINKLEKLIKILTNIQNKIQKIILINNQIIFKKIKERSS
SIO_010081: EXC65_RS04130
subclass of: SO_0000673
so part of: EXC65_RS04130
location: complement(9269..10414)
location: region:9269-10414:-1
so has part: feature:9269-10414:-1:exon

WP_129719499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9269-10414:-1:exon

EXC65_RS04135
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04135
old locus tag: NCTC10166_00846
so part of: sequence
location: complement(10520..12082)
location: region:10520-12082:-1
so has part: feature:10520-12082:-1:exon
subclass of: SO_0000010

position:10520:-1
position: 10520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12082:-1
position: 12082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10520-12082:-1:exon

EXC65_RS04135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04135
old locus tag: NCTC10166_00846
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012560330.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: class I SAM-dependent DNA methyltransferase
translation: MSKQNIEINYIDSIKEKLWKSCDEMRGNVPSEQYMHIIIAIIFLKAMSDKYEKAGEQIRKKYLNDGERKWLLAKKDLNLLKRYDVQFIVPESASWSNIQKYISKEEIGIKIDEALLALEEQNNSLKGLFEKNFSREDLDKQRLSKVIKQFSDINFSELKEDFIGRLYEYFLGNFFRKQGQNGGEFYTPQSIVELMVALLAPDSDSKIYDPACGTGGMFVQAKKYLEKHKKDITQMRVYGQEFSSTTWKLAKINLILNGFDPDDTHLGSKAESTFKEDLSGFEQFDIVLANPPFNLKIWENENASDDPRYKWGLPPTKNANYAWLSHILYKLNENGRAAVILANGALSSSQKEELSIRKKMLEENKIEAIISLPDKLFYTTGIPATIWIFNNNKLNDDVIFINAENLGELATKKLRVFNTENINEIVSAYNDAKLNKDFSIKGFAKRVSLNEIKENDYSLVPGRYIDLLEEEVDKEQLKAEILEIQNELKILFKEFTDLIPDVEKSIEQAIKFADEQEKEK
SIO_010081: EXC65_RS04135
subclass of: SO_0000673
so part of: EXC65_RS04135
location: complement(10520..12082)
location: region:10520-12082:-1
so has part: feature:10520-12082:-1:exon

WP_129719500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10520-12082:-1:exon

EXC65_RS04140
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04140
old locus tag: NCTC10166_00847
so part of: sequence
location: complement(12518..13288)
location: region:12518-13288:-1
so has part: feature:12518-13288:-1:exon
subclass of: SO_0000010

position:12518:-1
position: 12518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13288:-1
position: 13288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12518-13288:-1:exon

EXC65_RS04140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04140
old locus tag: NCTC10166_00847
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MNFLKNNEKMIKLFLSTKQNYKTQKTYFSFLKRIILLEKITIKQINKYISSLNVRNNTKLLYMRVVKSFLRWCNKNQKQSFNVELLNTYNNDSREKRIFTTTEIEILTKELKIFNDKVLEFYFWMVYENAARINEIINADFENLNSDYFTTTQVLKTKHKQSQRVVGIPEYLVDIYLEINFNNLKINNSSLNSRMSKFFKFLSKRHPNKFKKHDINFQTLRTNKITQWAYLGYNSTQIANITGHIKTQTLTLHKIF
SIO_010081: EXC65_RS04140
subclass of: SO_0000673
so part of: EXC65_RS04140
location: complement(12518..13288)
location: region:12518-13288:-1
so has part: feature:12518-13288:-1:exon

WP_129719501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12518-13288:-1:exon

EXC65_RS04145
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04145
old locus tag: NCTC10166_00848
so part of: sequence
location: 13383..14495
location: region:13383-14495:1
so has part: feature:13383-14495:1:exon
subclass of: SO_0000010

position:13383:1
position: 13383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14495:1
position: 14495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13383-14495:1:exon

EXC65_RS04145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04145
old locus tag: NCTC10166_00848
inference: COORDINATES: protein motif:HMM:NF013579.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: restriction endonuclease subunit S
translation: MAIYKLGEIIQVISGNSKLTKKYVDANNGEFGVVSSSSFNNGIFGYINTFLYEKGITISKDGSIGNVFWQDKPFSINTGAFLVKPKDLSIINEKYLFFLLKTKEKRLKQIGDGSVIKHIYAKDINNLEAIIPDLKTQNSIIDIIEPHEELFLRHNHLVRIDTIENAEKDIKTLIDIIEPNELIENKIKKMKKNIDKIYFWFFDNFSIRRNNFLYENVSFIKGKNKSKNQNTSCEKNTFINISSLQGKINDFTCDKKNVHFGDILISLDATTGIVNNNIEGFNGYAYKVESKTKKDVEIYLNLINKFNQKIIKNFSVGTTIMHASKAKNKLINFEFNHVQLIEKIYYFDFKLKKIEQKIQKLKNKILKIIF
SIO_010081: EXC65_RS04145
subclass of: SO_0000673
so part of: EXC65_RS04145
location: 13383..14495
location: region:13383-14495:1
so has part: feature:13383-14495:1:exon

WP_129719498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13383-14495:1:exon

EXC65_RS04150
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04150
old locus tag: NCTC10166_00849
so part of: sequence
location: complement(14478..15482)
location: region:14478-15482:-1
so has part: feature:14478-15482:-1:exon
subclass of: SO_0000010

position:14478:-1
position: 14478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15482:-1
position: 15482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14478-15482:-1:exon

EXC65_RS04150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04150
old locus tag: NCTC10166_00849
EC number: 3.1.21.-
inference: COORDINATES: protein motif:HMM:NF013579.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: restriction endonuclease subunit S
translation: MAIYELNKIVKFLKGKNIKQNETLENGEFNVYSSKTKDNGIFGKLNTFIFDGEYILITSHGAYAGTVIYVNEKFSTTSNCFVLKPDNSIVNTKFLFYLLKMNQLNLNAIAKGSAQGFLSNNDLSYYSVKIPPLETQNSIIDIIEPIEQTKNLIIQIEKKILKIYQQRKLSNVLIKDISYKINTGFAYNKKHIEDNGKYKIFKISNIGNSLTQNQETNFMKNNLLNIGDIITGLSGTIGTSKVITSKNWVSNQRTLSLTSDYPLNISESIKKQKTELLNIATGAAQKNITKNNILELKLIKTYNIDLKINEIYIILTKIKKILTVLKKQILKYYF
SIO_010081: EXC65_RS04150
subclass of: SO_0000673
so part of: EXC65_RS04150
location: complement(14478..15482)
location: region:14478-15482:-1
so has part: feature:14478-15482:-1:exon

WP_165001306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14478-15482:-1:exon

EXC65_RS04155
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04155
pseudo: true
so part of: sequence
location: <15651..>16058
location: region:15651-16058:1
so has part: feature:15651-16058:1:exon
subclass of: SO_0000010

position:15651:1
position: 15651
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:16058:1
position: 16058
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15651-16058:1:exon

EXC65_RS04155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004025660.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 4
product: restriction endonuclease subunit S
SIO_010081: EXC65_RS04155
subclass of: SO_0000673
so part of: EXC65_RS04155
location: <15651..>16058
location: region:15651-16058:1
so has part: feature:15651-16058:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15651-16058:1:exon

EXC65_RS04630
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04630
pseudo: true
so part of: sequence
location: complement(<16061..>16180)
location: region:16061-16180:-1
so has part: feature:16061-16180:-1:exon
subclass of: SO_0000010

position:16061:-1
position: 16061
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:16180:-1
position: 16180
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16061-16180:-1:exon

EXC65_RS04630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004026914.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 4
product: restriction endonuclease subunit S
SIO_010081: EXC65_RS04630
subclass of: SO_0000673
so part of: EXC65_RS04630
location: complement(<16061..>16180)
location: region:16061-16180:-1
so has part: feature:16061-16180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16061-16180:-1:exon

EXC65_RS04160
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04160
so part of: sequence
location: 16272..16787
location: region:16272-16787:1
so has part: feature:16272-16787:1:exon
subclass of: SO_0000010

position:16272:1
position: 16272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16787:1
position: 16787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16272-16787:1:exon

EXC65_RS04160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04160
inference: COORDINATES: protein motif:HMM:NF013579.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: restriction endonuclease subunit S
translation: MGKFYKLGEISNVISGRGPNGVKNIEAFKSEYGGVNWLLVKNLKSNQIQGEIGKYNFDPLKHKLIKLNKNEMVYSMYATPGIVAINFENNDLYINQSFCKIIPNPHIVIQKYLYFYLIKNKNNFLKFSSGTTQKNLNLSLVKKFNINIPPLETQNLLISIIEPLKYKNLFN
SIO_010081: EXC65_RS04160
subclass of: SO_0000673
so part of: EXC65_RS04160
location: 16272..16787
location: region:16272-16787:1
so has part: feature:16272-16787:1:exon

WP_232018842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16272-16787:1:exon

EXC65_RS04165
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
gene: topA
locus tag: EXC65_RS04165
old locus tag: NCTC10166_00851
pseudo: true
so part of: sequence
location: complement(16920..18762)
location: region:16920-18762:-1
so has part: feature:16920-18762:-1:exon
subclass of: SO_0000010

position:16920:-1
position: 16920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18762:-1
position: 18762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16920-18762:-1:exon

EXC65_RS04165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
gene: topA
locus tag: EXC65_RS04165
old locus tag: NCTC10166_00851
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004424930.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 4
product: type I DNA topoisomerase
SIO_010081: EXC65_RS04165
subclass of: SO_0000673
so part of: EXC65_RS04165
location: complement(16920..18762)
location: region:16920-18762:-1
so has part: feature:16920-18762:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16920-18762:-1:exon

EXC65_RS04635
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
gene: coaD
locus tag: EXC65_RS04635
pseudo: true
so part of: sequence
location: complement(18950..19394)
location: region:18950-19394:-1
so has part: feature:18950-19394:-1:exon
subclass of: SO_0000010

position:18950:-1
position: 18950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19394:-1
position: 19394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18950-19394:-1:exon

EXC65_RS04635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
gene: coaD
locus tag: EXC65_RS04635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006886819.1
GO function: GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO process: GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 4
product: pantetheine-phosphate adenylyltransferase
SIO_010081: EXC65_RS04635
subclass of: SO_0000673
so part of: EXC65_RS04635
location: complement(18950..19394)
location: region:18950-19394:-1
so has part: feature:18950-19394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18950-19394:-1:exon

EXC65_RS04175
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04175
old locus tag: NCTC10166_00852
so part of: sequence
location: complement(19372..20358)
location: region:19372-20358:-1
so has part: feature:19372-20358:-1:exon
subclass of: SO_0000010

position:19372:-1
position: 19372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20358:-1
position: 20358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19372-20358:-1:exon

EXC65_RS04175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04175
old locus tag: NCTC10166_00852
EC number: 2.7.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005683214.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008776 - acetate kinase activity [Evidence IEA]
GO process: GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: acetate/propionate family kinase
translation: MKRNKVIENLDEIEIVGFRVVHGGEYFVDTTELKAKEIQVIDELSKFAPLHNPGALLAIKAIKKVIPNAKLSATFDTAFHTTIPNVNSIYPINRELSQKYGIKKYGFHGTSHKFITQKLAEILNKKTVSLVNMHIGSGASLCAIKDSKSIDTSMGMTPLAGIMMGTRSGDIDPSIHEYVMEQANISIKEFTNILNKQSGLLGVSGIGSDLRDVIQKYQENDANAILAIDLYTQKIADYLINYINKIGKNIDALVFTAGVGENSSFIRQMILEKINILDIKVDTKLNNVSPSEIASSHLITTSDSAIPVYVIRTNEELMIAQDAKKLFN
SIO_010081: EXC65_RS04175
subclass of: SO_0000673
so part of: EXC65_RS04175
location: complement(19372..20358)
location: region:19372-20358:-1
so has part: feature:19372-20358:-1:exon

WP_232018852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19372-20358:-1:exon

EXC65_RS04640
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04640
old locus tag: NCTC10166_00853
so part of: sequence
location: complement(20396..20545)
location: region:20396-20545:-1
so has part: feature:20396-20545:-1:exon
subclass of: SO_0000010

position:20396:-1
position: 20396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20545:-1
position: 20545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20396-20545:-1:exon

EXC65_RS04640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04640
old locus tag: NCTC10166_00853
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MLVLLQWNDHFFQKNELEIIAGGISERIGISDSFLTMEYKGKKTKKQLI
SIO_010081: EXC65_RS04640
subclass of: SO_0000673
so part of: EXC65_RS04640
location: complement(20396..20545)
location: region:20396-20545:-1
so has part: feature:20396-20545:-1:exon

WP_232018853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20396-20545:-1:exon

EXC65_RS04180
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04180
pseudo: true
so part of: sequence
location: complement(20573..21543)
location: region:20573-21543:-1
so has part: feature:20573-21543:-1:exon
subclass of: SO_0000010

position:20573:-1
position: 20573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21543:-1
position: 21543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20573-21543:-1:exon

EXC65_RS04180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011290314.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 4
product: phosphate acetyltransferase
SIO_010081: EXC65_RS04180
subclass of: SO_0000673
so part of: EXC65_RS04180
location: complement(20573..21543)
location: region:20573-21543:-1
so has part: feature:20573-21543:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20573-21543:-1:exon

EXC65_RS04185
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04185
old locus tag: NCTC10166_00857
so part of: sequence
location: complement(21754..21844)
location: region:21754-21844:-1
so has part: feature:21754-21844:-1:exon
subclass of: SO_0000663

position:21754:-1
position: 21754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21844:-1
position: 21844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21754-21844:-1:exon

EXC65_RS04185
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2120
locus tag: EXC65_RS04185
old locus tag: NCTC10166_00857
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(21808..21810),aa:Ser,seq:gct)
SIO_010081: EXC65_RS04185
subclass of: SO_0000673
so part of: EXC65_RS04185
location: complement(21754..21844)
location: region:21754-21844:-1
so has part: feature:21754-21844:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21754-21844:-1:exon

EXC65_RS04190
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
gene: pfkA
locus tag: EXC65_RS04190
old locus tag: NCTC10166_00858
so part of: sequence
location: 22154..22978
location: region:22154-22978:1
so has part: feature:22154-22978:1:exon
subclass of: SO_0000010

position:22154:1
position: 22154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22978:1
position: 22978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22154-22978:1:exon

EXC65_RS04190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
gene: pfkA
locus tag: EXC65_RS04190
old locus tag: NCTC10166_00858
EC number: 2.7.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011264840.1
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: 6-phosphofructokinase
translation: MEIKKIAILTSGGDAPGMNNVIRAVVKSALLNNIEPFLVYGGYKGLYKNKIVSTTNKNVDKYLAQGGTFIYSTRFPKFKNPEIRQEAIGNLKRLGIDALLVIGGNGSYAGALKLHEEGIKVLTIPGTIDNDINSSEFTLGYDTALNTIVEAVDKLRDTATSHSRFFIVETMGHGAGDLALYSGIATGAEIIVTNEKPMTVDEIIAVVHDQVHNRRKRSVIAIVSEFIYPNLDNVAKAVQAKTKVSARAMKLGHLQRGGRPSAQDRILGTLMVQK
SIO_010081: EXC65_RS04190
subclass of: SO_0000673
so part of: EXC65_RS04190
location: 22154..22978
location: region:22154-22978:1
so has part: feature:22154-22978:1:exon

WP_232018854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22154-22978:1:exon

EXC65_RS04195
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04195
old locus tag: NCTC10166_00860
so part of: sequence
location: complement(23293..24513)
location: region:23293-24513:-1
so has part: feature:23293-24513:-1:exon
subclass of: SO_0000010

position:23293:-1
position: 23293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24513:-1
position: 24513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23293-24513:-1:exon

EXC65_RS04195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04195
old locus tag: NCTC10166_00860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006886645.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: replication-associated recombination protein A
translation: MNNITSKIFVPEKLDDIVGQSHIKFLLKKIIDHKNNTSFIFYGESGIGKTSSAIVLAKELGKKFVIFNSVLDNKEKLINYINNYDIIIIDEIHRLNKDKQDILLSFLEEKNKTFYATTTENPFFKVNPAIRSRLQILQFEKISEEDITNALQKIIKNKKINLIFDKETLEKFVRISSGDLRNVFNNLELLINLKFKGKITIEILEKIFPHKNFYYDYKKDASYDNLSAFHKSVRGSDVDASLYYGLLLVVGGNLDGLFRRMLAIAYEDIGLANSLIGLKVDTAIKAAERLGMPEAILPIGNIIIELALSPKSNSSYLATQKALNTINENKVYQVPKHLKDNHYASAAKLKNGIGYLYPHDFANSYVEQQYMPKELIEEKFFHFKNNANERKIKEYWKQIKEKNNNK
SIO_010081: EXC65_RS04195
subclass of: SO_0000673
so part of: EXC65_RS04195
location: complement(23293..24513)
location: region:23293-24513:-1
so has part: feature:23293-24513:-1:exon

WP_129719492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23293-24513:-1:exon

EXC65_RS04200
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04200
old locus tag: NCTC10166_00861
so part of: sequence
location: complement(24506..25372)
location: region:24506-25372:-1
so has part: feature:24506-25372:-1:exon
subclass of: SO_0000010

position:24506:-1
position: 24506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25372:-1
position: 25372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24506-25372:-1:exon

EXC65_RS04200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04200
old locus tag: NCTC10166_00861
inference: COORDINATES: protein motif:HMM:NF021427.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: DUF2130 domain-containing protein
translation: MEAELSTQKEEHKKQIDRMTREKSLNSKVMGEDLEKWIQNEFDFHFGFNSNVKMTKAKEIDGKKADFLFEVLDDVTQKVIGTVIIEAKTAGENSKEKNSKFYKKLENDRLNQKANYALLVTELEPEQNFVIKKEKNEYSNIYVTRPQYFITFLSLITHILNIKKGVISSELEFKEKYEILDEFDKMKNKILDNSLKHMTTDIEDLSKHITTIQSTAFKMEELVKIKLDKHINTFKNKIENFNINKIVKKINKVDNNFAYLKKDNFSSPSVSHSEIEDSNLIKPNEKNE
SIO_010081: EXC65_RS04200
subclass of: SO_0000673
so part of: EXC65_RS04200
location: complement(24506..25372)
location: region:24506-25372:-1
so has part: feature:24506-25372:-1:exon

WP_129720239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24506-25372:-1:exon

EXC65_RS04205
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04205
old locus tag: NCTC10166_00862
so part of: sequence
location: complement(25747..25962)
location: region:25747-25962:-1
so has part: feature:25747-25962:-1:exon
subclass of: SO_0000010

position:25747:-1
position: 25747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25962:-1
position: 25962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25747-25962:-1:exon

EXC65_RS04205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04205
old locus tag: NCTC10166_00862
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MLEGNEIITNELKKQWENEFKNSNEFIELKEKINILEKEKINFENELQKSEKEKEIISIKSIEDFKKLMIF
SIO_010081: EXC65_RS04205
subclass of: SO_0000673
so part of: EXC65_RS04205
location: complement(25747..25962)
location: region:25747-25962:-1
so has part: feature:25747-25962:-1:exon

WP_165001359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25747-25962:-1:exon

EXC65_RS04210
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04210
old locus tag: NCTC10166_00864
so part of: sequence
location: complement(26206..26853)
location: region:26206-26853:-1
so has part: feature:26206-26853:-1:exon
subclass of: SO_0000010

position:26206:-1
position: 26206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26853:-1
position: 26853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26206-26853:-1:exon

EXC65_RS04210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04210
old locus tag: NCTC10166_00864
inference: COORDINATES: protein motif:HMM:NF024487.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: AAA domain-containing protein
translation: MKNIENIQGDEADLLIVSVVYDKTTALSSTYVSRRGGQNALNVAISRAKNKMIIVKSIKANEIETLNTNDDLLLFKKWLLFLELSNDERKRYLLLDNQQNNNNSSESEVNNLVDKIIEKILKMSIFIEQNYKIKKDYIIGSKKIDLAILNKENMFLLGIAIDDYNNYSNYEEYIIFKDSISYLLSKKYNLLIIEKIKWLINRDKILNLIEEKLTN
SIO_010081: EXC65_RS04210
subclass of: SO_0000673
so part of: EXC65_RS04210
location: complement(26206..26853)
location: region:26206-26853:-1
so has part: feature:26206-26853:-1:exon

WP_276310802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26206-26853:-1:exon

EXC65_RS04215
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04215
old locus tag: NCTC10166_00865
so part of: sequence
location: complement(26870..27289)
location: region:26870-27289:-1
so has part: feature:26870-27289:-1:exon
subclass of: SO_0000010

position:26870:-1
position: 26870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27289:-1
position: 27289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26870-27289:-1:exon

EXC65_RS04215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04215
old locus tag: NCTC10166_00865
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MQPTSWFSTRSDIEDIELGNIESILNYAVYKGIYSILLDKNYRSNFASLMTFSSKHFYNSKLDVIDKLTTFDEEPIEVYDINGEWKNKSNLEEAKLVVELAQANLSKYNKIIILTFNRPQRELIENIIFNKYLELEKSY
SIO_010081: EXC65_RS04215
subclass of: SO_0000673
so part of: EXC65_RS04215
location: complement(26870..27289)
location: region:26870-27289:-1
so has part: feature:26870-27289:-1:exon

WP_129720242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26870-27289:-1:exon

EXC65_RS04220
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04220
old locus tag: NCTC10166_00866
so part of: sequence
location: complement(27325..27510)
location: region:27325-27510:-1
so has part: feature:27325-27510:-1:exon
subclass of: SO_0000010

position:27325:-1
position: 27325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27510:-1
position: 27510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27325-27510:-1:exon

EXC65_RS04220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04220
old locus tag: NCTC10166_00866
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MDEEIHINLFLDHYVIIKELFPIIISSVDTELTKWDKEEFDYAILDESSQILLKKQSQFYI
SIO_010081: EXC65_RS04220
subclass of: SO_0000673
so part of: EXC65_RS04220
location: complement(27325..27510)
location: region:27325-27510:-1
so has part: feature:27325-27510:-1:exon

WP_129720243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27325-27510:-1:exon

EXC65_RS04500
type: Gene
subclass of: SO_0000704
RO_0002162: 2120
locus tag: EXC65_RS04500
so part of: sequence
location: complement(27619..>27946)
location: region:27619-27946:-1
so has part: feature:27619-27946:-1:exon
subclass of: SO_0000010

position:27619:-1
position: 27619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27946:-1
position: 27946
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27619-27946:-1:exon

EXC65_RS04500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2120
locus tag: EXC65_RS04500
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 2
transl table: 4
product: hypothetical protein
translation: SLKTIENLYKLSKNINLNPSRITKDPKKLKILIFETLKNKKVSAIKKLFIKFNDDINRDANIILNDFADYDGDLSEITNKIVDIEKKKLINIDEFYKHLIGDDKTRYL
SIO_010081: EXC65_RS04500
subclass of: SO_0000673
so part of: EXC65_RS04500
location: complement(27619..>27946)
location: region:27619-27946:-1
so has part: feature:27619-27946:-1:exon

WP_197724537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27619-27946:-1:exon