Portunus trituberculatus isolate SZX2019 chromosome 12, ASM1759143v1, whole genome shotgun sequence.
Portunus trituberculatus (swimming crab)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Brachyura; Eubrachyura; Portunoidea; Portunidae; Portunus.
REFSEQ INFORMATION: The reference sequence is identical to\nCM030082.1.\nAssembly name: ASM1759143v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Center for Ecological and\nEnvironmental Sciences on 2021/03/30. The original whole-genome\nshotgun project has the accession JAGGDN000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Center for Ecological and Environmental\n Sciences\nAssembly Method :: Wtdbg v. 2.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 54.74x\nSequencing Technology :: Oxford Nanopore; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Portunus trituberculatus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
CAD protein-like, transcript variant X12
CAD protein-like, transcript variant X10
CAD protein-like, transcript variant X11
uncharacterized LOC123502728, transcript variant X1
uncharacterized LOC123502728, transcript variant X2
uncharacterized protein LOC123502728 isoform X1
uncharacterized protein LOC123502728 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC123502897, transcript variant X3
uncharacterized LOC123502897, transcript variant X1
uncharacterized LOC123502897, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
uncharacterized LOC123502900, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
uncharacterized LOC123502900, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
patched domain-containing protein 3-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: adapter molecule Crk-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh1-like
glucose dehydrogenase [FAD, quinone]-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: importin subunit alpha-3-like
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like, transcript variant X1
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like, transcript variant X3
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like, transcript variant X4
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like, transcript variant X5
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like, transcript variant X2
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like isoform X1
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like isoform X2
LOW QUALITY PROTEIN: basic proline-rich protein-like
phosphatidylinositol-glycan biosynthesis class X protein-like
motile sperm domain-containing protein 2-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
LOW QUALITY PROTEIN: motile sperm domain-containing protein 2-like
LOW QUALITY PROTEIN: GDP-L-fucose synthase-like
insulin-degrading enzyme-like, transcript variant X1
insulin-degrading enzyme-like isoform X1
insulin-degrading enzyme-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
insulin-degrading enzyme-like isoform X2
uncharacterized LOC123502922, transcript variant X1
uncharacterized LOC123502922, transcript variant X4
uncharacterized LOC123502922, transcript variant X3
uncharacterized LOC123502922, transcript variant X5
uncharacterized LOC123502922, transcript variant X2
uncharacterized protein LOC123502922 isoform X1
uncharacterized protein LOC123502922 isoform X3
uncharacterized protein LOC123502922 isoform X2
uncharacterized protein LOC123502922 isoform X4
28S ribosomal protein S29, mitochondrial-like, transcript variant X2
28S ribosomal protein S29, mitochondrial-like, transcript variant X1
28S ribosomal protein S29, mitochondrial-like isoform X2
28S ribosomal protein S29, mitochondrial-like isoform X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: dynein axonemal heavy chain 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
RUN domain-containing protein 1-like, transcript variant X2
RUN domain-containing protein 1-like, transcript variant X3
RUN domain-containing protein 1-like, transcript variant X4
RUN domain-containing protein 1-like, transcript variant X1
RUN domain-containing protein 1-like isoform X3
RUN domain-containing protein 1-like isoform X1
RUN domain-containing protein 1-like isoform X2
mitochondrial import inner membrane translocase subunit tim16-A-like
uncharacterized LOC123502876, transcript variant X2
uncharacterized LOC123502876, transcript variant X1
muscle LIM protein Mlp84B-like, transcript variant X1
muscle LIM protein Mlp84B-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
muscle LIM protein Mlp84B-like isoform X2
muscle LIM protein Mlp84B-like isoform X1
uncharacterized LOC123502769, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC123502769, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized protein LOC123502769 isoform X2
uncharacterized protein LOC123502769 isoform X1
dynein light chain roadblock-type 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized LOC123502856, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
uncharacterized LOC123502856, transcript variant X2
metabotropic glutamate receptor 5-like, transcript variant X3
metabotropic glutamate receptor 5-like, transcript variant X7
metabotropic glutamate receptor 5-like, transcript variant X6
metabotropic glutamate receptor 5-like, transcript variant X1
metabotropic glutamate receptor 5-like, transcript variant X2
metabotropic glutamate receptor 5-like, transcript variant X5
metabotropic glutamate receptor 5-like, transcript variant X4
metabotropic glutamate receptor 5-like isoform X4
metabotropic glutamate receptor 5-like isoform X2
metabotropic glutamate receptor 5-like isoform X3
metabotropic glutamate receptor 5-like isoform X1
33 kDa inner dynein arm light chain, axonemal-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
33 kDa inner dynein arm light chain, axonemal-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
33 kDa inner dynein arm light chain, axonemal-like isoform X2
33 kDa inner dynein arm light chain, axonemal-like isoform X1
ER membrane protein complex subunit 2-like
BRCA1-associated RING domain protein 1-like
sodium- and chloride-dependent GABA transporter 3-like
transfer RNA phenylalanine (anticodon GAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC123502757, transcript variant X1
uncharacterized LOC123502757, transcript variant X2
uncharacterized protein LOC123502757 isoform X1
uncharacterized protein LOC123502757 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: WD repeat-containing protein 86-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
formimidoyltransferase-cyclodeaminase-like, transcript variant X2
formimidoyltransferase-cyclodeaminase-like, transcript variant X1
uncharacterized LOC123502714, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
uncharacterized LOC123502714, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized LOC123502714, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: putative inactive cytochrome P450 2G1
bromodomain-containing protein 1-like, transcript variant X7
bromodomain-containing protein 1-like, transcript variant X1
bromodomain-containing protein 1-like, transcript variant X2
bromodomain-containing protein 1-like, transcript variant X5
bromodomain-containing protein 1-like, transcript variant X6
bromodomain-containing protein 1-like, transcript variant X9
bromodomain-containing protein 1-like, transcript variant X4
bromodomain-containing protein 1-like, transcript variant X3
bromodomain-containing protein 1-like, transcript variant X8
bromodomain-containing protein 1-like, transcript variant X13
bromodomain-containing protein 1-like, transcript variant X14
bromodomain-containing protein 1-like, transcript variant X11
bromodomain-containing protein 1-like, transcript variant X12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
bromodomain-containing protein 1-like, transcript variant X10
bromodomain-containing protein 1-like isoform X7
bromodomain-containing protein 1-like isoform X10
bromodomain-containing protein 1-like isoform X1
bromodomain-containing protein 1-like isoform X2
bromodomain-containing protein 1-like isoform X5
bromodomain-containing protein 1-like isoform X6
bromodomain-containing protein 1-like isoform X9
bromodomain-containing protein 1-like isoform X4
bromodomain-containing protein 1-like isoform X3
bromodomain-containing protein 1-like isoform X8
bromodomain-containing protein 1-like isoform X12
bromodomain-containing protein 1-like isoform X13
bromodomain-containing protein 1-like isoform X11
zinc finger protein 771-like, transcript variant X9
zinc finger protein 771-like, transcript variant X6
zinc finger protein 771-like, transcript variant X12
zinc finger protein 771-like, transcript variant X1
zinc finger protein 771-like, transcript variant X8
zinc finger protein 771-like, transcript variant X2
zinc finger protein 771-like, transcript variant X7
zinc finger protein 771-like, transcript variant X10
zinc finger protein 771-like, transcript variant X5
zinc finger protein 771-like, transcript variant X4
zinc finger protein 771-like, transcript variant X3
zinc finger protein 771-like, transcript variant X11
zinc finger protein 771-like, transcript variant X13
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
dihydroxyacetone phosphate acyltransferase-like, transcript variant X3
dihydroxyacetone phosphate acyltransferase-like, transcript variant X1
dihydroxyacetone phosphate acyltransferase-like, transcript variant X2
dihydroxyacetone phosphate acyltransferase-like isoform X1
dihydroxyacetone phosphate acyltransferase-like isoform X2
phosphoglucomutase-2-like, transcript variant X3
phosphoglucomutase-2-like, transcript variant X1
phosphoglucomutase-2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
glycine receptor subunit alpha-4-like, transcript variant X1
glycine receptor subunit alpha-4-like, transcript variant X3
glycine receptor subunit alpha-4-like, transcript variant X2
glycine receptor subunit alpha-4-like isoform X1
glycine receptor subunit alpha-4-like isoform X2
solute carrier family 49 member 4 homolog
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
LOW QUALITY PROTEIN: solute carrier family 49 member 4 homolog
uncharacterized LOC123502682, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC123502682, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
gamma-aminobutyric acid receptor subunit beta-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
gamma-aminobutyric acid receptor subunit beta-like, transcript variant X3
gamma-aminobutyric acid receptor subunit beta-like, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
gamma-aminobutyric acid receptor subunit beta-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
gamma-aminobutyric acid receptor subunit beta-like, transcript variant X12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
gamma-aminobutyric acid receptor subunit beta-like, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
gamma-aminobutyric acid receptor subunit beta-like, transcript variant X6
gamma-aminobutyric acid receptor subunit beta-like, transcript variant X7
gamma-aminobutyric acid receptor subunit beta-like, transcript variant X2
gamma-aminobutyric acid receptor subunit beta-like, transcript variant X5
gamma-aminobutyric acid receptor subunit beta-like, transcript variant X14
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
gamma-aminobutyric acid receptor subunit beta-like, transcript variant X13
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
gamma-aminobutyric acid receptor subunit beta-like, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
gamma-aminobutyric acid receptor subunit beta-like, transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
gamma-aminobutyric acid receptor subunit beta-like isoform X9
gamma-aminobutyric acid receptor subunit beta-like isoform X1
gamma-aminobutyric acid receptor subunit beta-like isoform X4
gamma-aminobutyric acid receptor subunit beta-like isoform X14
gamma-aminobutyric acid receptor subunit beta-like isoform X12
gamma-aminobutyric acid receptor subunit beta-like isoform X13
gamma-aminobutyric acid receptor subunit beta-like isoform X11
gamma-aminobutyric acid receptor subunit beta-like isoform X7
gamma-aminobutyric acid receptor subunit beta-like isoform X10
gamma-aminobutyric acid receptor subunit beta-like isoform X5
gamma-aminobutyric acid receptor subunit beta-like isoform X6
gamma-aminobutyric acid receptor subunit beta-like isoform X8
gamma-aminobutyric acid receptor subunit beta-like isoform X2
gamma-aminobutyric acid receptor subunit beta-like isoform X3
glutamate receptor 1-like, transcript variant X4
glutamate receptor 1-like, transcript variant X3
glutamate receptor 1-like, transcript variant X2
glutamate receptor 1-like, transcript variant X1
transfer RNA valine (anticodon UAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC123502722, transcript variant X1
uncharacterized LOC123502722, transcript variant X3
uncharacterized LOC123502722, transcript variant X2
uncharacterized protein LOC123502722 isoform X1
uncharacterized protein LOC123502722 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
LOW QUALITY PROTEIN: uncharacterized protein LOC123502754
macrophage mannose receptor 1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
macrophage mannose receptor 1-like, transcript variant X1
LOW QUALITY PROTEIN: N-alpha-acetyltransferase 30-like
heparan sulfate 2-O-sulfotransferase pipe-like, transcript variant X1
heparan sulfate 2-O-sulfotransferase pipe-like, transcript variant X2
heparan sulfate 2-O-sulfotransferase pipe-like, transcript variant X3
heparan sulfate 2-O-sulfotransferase pipe-like isoform X1
heparan sulfate 2-O-sulfotransferase pipe-like isoform X2
heparan sulfate 2-O-sulfotransferase pipe-like isoform X3
26S proteasome regulatory subunit 7, transcript variant X2
26S proteasome regulatory subunit 7, transcript variant X1
uncharacterized LOC123502581, transcript variant X1
uncharacterized LOC123502581, transcript variant X2
uncharacterized protein LOC123502581 isoform X1
uncharacterized protein LOC123502581 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 4 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
zwei Ig domain protein zig-8-like, transcript variant X2
zwei Ig domain protein zig-8-like, transcript variant X1
zwei Ig domain protein zig-8-like isoform X2
zwei Ig domain protein zig-8-like isoform X1
transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
atrial natriuretic peptide receptor 1-like, transcript variant X1
atrial natriuretic peptide receptor 1-like, transcript variant X2
atrial natriuretic peptide receptor 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcription initiation factor TFIID subunit 5-like
ras-related protein Rab-5B-like, transcript variant X3
ras-related protein Rab-5B-like, transcript variant X1
ras-related protein Rab-5B-like, transcript variant X2
golgin subfamily A member 6-like protein 22
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: golgin subfamily A member 6-like protein 22
dipeptidyl peptidase 3-like, transcript variant X10
dipeptidyl peptidase 3-like, transcript variant X8
dipeptidyl peptidase 3-like, transcript variant X6
dipeptidyl peptidase 3-like, transcript variant X7
dipeptidyl peptidase 3-like, transcript variant X4
dipeptidyl peptidase 3-like, transcript variant X3
dipeptidyl peptidase 3-like, transcript variant X2
dipeptidyl peptidase 3-like, transcript variant X5
dipeptidyl peptidase 3-like, transcript variant X1
dipeptidyl peptidase 3-like, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
uncharacterized LOC123502535, transcript variant X2
uncharacterized LOC123502536, transcript variant X1
uncharacterized LOC123502536, transcript variant X2
uncharacterized LOC123502535, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
uncharacterized LOC123502538, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123502538, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
serine/threonine-protein phosphatase 4 regulatory subunit 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
kinase D-interacting substrate of 220 kDa-like, transcript variant X6
kinase D-interacting substrate of 220 kDa-like, transcript variant X5
kinase D-interacting substrate of 220 kDa-like, transcript variant X2
kinase D-interacting substrate of 220 kDa-like, transcript variant X3
kinase D-interacting substrate of 220 kDa-like, transcript variant X1
kinase D-interacting substrate of 220 kDa-like, transcript variant X4
kinase D-interacting substrate of 220 kDa-like, transcript variant X8
kinase D-interacting substrate of 220 kDa-like, transcript variant X7
kinase D-interacting substrate of 220 kDa-like isoform X5
kinase D-interacting substrate of 220 kDa B-like isoform X4
kinase D-interacting substrate of 220 kDa B-like isoform X2
kinase D-interacting substrate of 220 kDa B-like isoform X1
kinase D-interacting substrate of 220 kDa-like isoform X7
kinase D-interacting substrate of 220 kDa-like isoform X6
kinase D-interacting substrate of 220 kDa B-like isoform X3
FHF complex subunit HOOK interacting protein 1A-like, transcript variant X2
FHF complex subunit HOOK interacting protein 1A-like, transcript variant X1
FHF complex subunit HOOK interacting protein 1A-like isoform X2
FHF complex subunit HOOK interacting protein 1A-like isoform X1
guanine nucleotide-binding protein subunit beta-like protein
uncharacterized LOC123502816, transcript variant X2
uncharacterized LOC123502816, transcript variant X1
uncharacterized protein LOC123502816 isoform X1
uncharacterized protein LOC123502816 isoform X2
LOW QUALITY PROTEIN: uncharacterized protein LOC123502615
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 3 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC123502708
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
uncharacterized LOC123502655, transcript variant X2
uncharacterized LOC123502655, transcript variant X3
uncharacterized LOC123502655, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
organic solute transporter subunit alpha-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
muscleblind-like protein 1, transcript variant X4
muscleblind-like protein 1, transcript variant X6
muscleblind-like protein 1, transcript variant X13
muscleblind-like protein 1, transcript variant X12
muscleblind-like protein 1, transcript variant X9
muscleblind-like protein 1, transcript variant X8
muscleblind-like protein 1, transcript variant X11
muscleblind-like protein 1, transcript variant X10
muscleblind-like protein 1, transcript variant X7
muscleblind-like protein 1, transcript variant X16
muscleblind-like protein 1, transcript variant X15
muscleblind-like protein 1, transcript variant X14
muscleblind-like protein 1, transcript variant X1
muscleblind-like protein 1, transcript variant X2
muscleblind-like protein 1, transcript variant X3
muscleblind-like protein 1, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78% coverage of the annotated genomic feature by RNAseq alignments
carbohydrate sulfotransferase 11-like, transcript variant X2
uncharacterized LOC123502552, transcript variant X1
uncharacterized LOC123502552, transcript variant X2
carbohydrate sulfotransferase 11-like, transcript variant X1
carbohydrate sulfotransferase 11-like isoform X1
carbohydrate sulfotransferase 11-like isoform X2
mannose-1-phosphate guanyltransferase alpha-A-like, transcript variant X2
mannose-1-phosphate guanyltransferase alpha-A-like, transcript variant X1
mannose-1-phosphate guanyltransferase alpha-A-like isoform X1
mannose-1-phosphate guanyltransferase alpha-A-like isoform X2
uncharacterized LOC123502724, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
uncharacterized LOC123502724, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC123502735, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123502735, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC123502735, transcript variant X2
uncharacterized LOC123502735, transcript variant X1
LOW QUALITY PROTEIN: uncharacterized protein LOC123502733
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
gamma-aminobutyric acid type B receptor subunit 1-like, transcript variant X3
gamma-aminobutyric acid type B receptor subunit 1-like, transcript variant X1
gamma-aminobutyric acid type B receptor subunit 1-like, transcript variant X4
gamma-aminobutyric acid type B receptor subunit 1-like, transcript variant X6
gamma-aminobutyric acid type B receptor subunit 1-like, transcript variant X9
gamma-aminobutyric acid type B receptor subunit 1-like, transcript variant X7
gamma-aminobutyric acid type B receptor subunit 1-like, transcript variant X5
gamma-aminobutyric acid type B receptor subunit 1-like, transcript variant X8
gamma-aminobutyric acid type B receptor subunit 1-like isoform X3
gamma-aminobutyric acid type B receptor subunit 1-like isoform X1
gamma-aminobutyric acid type B receptor subunit 1-like isoform X6
gamma-aminobutyric acid type B receptor subunit 1-like isoform X7
gamma-aminobutyric acid type B receptor subunit 1-like isoform X5
gamma-aminobutyric acid type B receptor subunit 1-like isoform X8
gamma-aminobutyric acid type B receptor subunit 1-like isoform X4
gamma-aminobutyric acid type B receptor subunit 1-like isoform X9
gamma-aminobutyric acid type B receptor subunit 1-like, transcript variant X2
gamma-aminobutyric acid type B receptor subunit 1-like isoform X2
gamma-aminobutyric acid type B receptor subunit 1-like, transcript variant X10
gamma-aminobutyric acid type B receptor subunit 1-like isoform X10
LOW QUALITY PROTEIN: alpha-L-fucosidase-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
LOW QUALITY PROTEIN: uncharacterized protein LOC123502834
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12-like
LOW QUALITY PROTEIN: actin-binding protein IPP-like
golgin subfamily A member 1-like, transcript variant X3
golgin subfamily A member 1-like, transcript variant X1
golgin subfamily A member 1-like, transcript variant X2
golgin subfamily A member 1-like isoform X2
golgin subfamily A member 1-like isoform X1
eukaryotic translation initiation factor 3 subunit I-like
nuclear envelope integral membrane protein 1-like, transcript variant X3
nuclear envelope integral membrane protein 1-like, transcript variant X2
nuclear envelope integral membrane protein 1-like, transcript variant X1
nuclear envelope integral membrane protein 1-like, transcript variant X4
nuclear envelope integral membrane protein 1-like isoform X3
nuclear envelope integral membrane protein 1-like isoform X2
nuclear envelope integral membrane protein 1-like isoform X1
nuclear envelope integral membrane protein 1-like isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 4 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: four-jointed box protein 1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: roundabout homolog 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
calponin homology domain-containing protein DDB_G0272472-like
LOW QUALITY PROTEIN: calponin homology domain-containing protein DDB_G0272472-like
leucine-rich repeats and immunoglobulin-like domains protein 1
LOW QUALITY PROTEIN: leucine-rich repeats and immunoglobulin-like domains protein 1
LOW QUALITY PROTEIN: uncharacterized protein LOC123502828
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC123502626
regulator of microtubule dynamics protein 1-like
LOW QUALITY PROTEIN: regulator of microtubule dynamics protein 1-like
arginine-glutamic acid dipeptide repeats protein-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon
LOW QUALITY PROTEIN: arginine-glutamic acid dipeptide repeats protein-like
probable E3 ubiquitin-protein ligase makorin-2, transcript variant X2
probable E3 ubiquitin-protein ligase makorin-2, transcript variant X3
probable E3 ubiquitin-protein ligase makorin-2, transcript variant X1
probable E3 ubiquitin-protein ligase makorin-2
facilitated trehalose transporter Tret1-like, transcript variant X1
facilitated trehalose transporter Tret1-like, transcript variant X2
facilitated trehalose transporter Tret1-like isoform X2
facilitated trehalose transporter Tret1-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized LOC123502560, transcript variant X1
uncharacterized LOC123502560, transcript variant X2
histone-lysine N-methyltransferase SETMAR-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: GTP-binding protein GEM-like
SET domain-containing protein SmydA-8-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
SET domain-containing protein SmydA-8-like
SET domain-containing protein SmydA-8-like, transcript variant X2
XK-related protein 6-like, transcript variant X4
XK-related protein 6-like, transcript variant X1
XK-related protein 6-like, transcript variant X3
XK-related protein 6-like, transcript variant X2
aldehyde dehydrogenase, mitochondrial-like
serine protease HTRA3-like, transcript variant X2
serine protease HTRA3-like, transcript variant X1
serine protease HTRA3-like, transcript variant X3
serine protease HTRA3-like, transcript variant X4
inositol polyphosphate 1-phosphatase-like
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7-like
ER membrane protein complex subunit 3-like
MICOS complex subunit MIC60-like, transcript variant X3
MICOS complex subunit MIC60-like, transcript variant X4
MICOS complex subunit MIC60-like, transcript variant X2
MICOS complex subunit MIC60-like, transcript variant X1
MICOS complex subunit MIC60-like isoform X4
MICOS complex subunit MIC60-like isoform X3
MICOS complex subunit MIC60-like isoform X2
MICOS complex subunit MIC60-like isoform X1
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like
AP-1 complex subunit mu-1-like, transcript variant X1
AP-1 complex subunit mu-1-like, transcript variant X2
uncharacterized LOC123502880, transcript variant X3
uncharacterized LOC123502880, transcript variant X2
uncharacterized LOC123502880, transcript variant X4
uncharacterized LOC123502880, transcript variant X5
uncharacterized LOC123502880, transcript variant X1
uncharacterized LOC123502886, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized LOC123502886, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC123502886, transcript variant X2
uncharacterized LOC123502886, transcript variant X5
uncharacterized LOC123502886, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
uncharacterized LOC123502886, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
carbohydrate sulfotransferase 3-like, transcript variant X1
carbohydrate sulfotransferase 3-like, transcript variant X2
carbohydrate sulfotransferase 3-like, transcript variant X3
carbohydrate sulfotransferase 3-like isoform X1
carbohydrate sulfotransferase 3-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
rRNA N6-adenosine-methyltransferase ZCCHC4-like
ras-related protein Rab-8A-like, transcript variant X1
ras-related protein Rab-8A-like, transcript variant X2
ras-related protein Rab-8A-like isoform X2
ras-related protein Rab-8A-like isoform X1
probable ATP-dependent RNA helicase DDX27, transcript variant X3
probable ATP-dependent RNA helicase DDX27, transcript variant X2
probable ATP-dependent RNA helicase DDX27, transcript variant X1
probable ATP-dependent RNA helicase DDX27 isoform X3
probable ATP-dependent RNA helicase DDX27 isoform X2
probable ATP-dependent RNA helicase DDX27 isoform X1
cleavage and polyadenylation specificity factor subunit 3-like
LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 3-like
mitogen-activated protein kinase kinase kinase 15-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
mitogen-activated protein kinase kinase kinase 15-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
mitogen-activated protein kinase kinase kinase 15-like isoform X1
mitogen-activated protein kinase kinase kinase 15-like isoform X3
mitogen-activated protein kinase kinase kinase 15-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
mitogen-activated protein kinase kinase kinase 15-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
mitogen-activated protein kinase kinase kinase 15-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 44% coverage of the annotated genomic feature by RNAseq alignments
zinc finger CCHC domain-containing protein 10-like
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: glycogen phosphorylase-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
LOW QUALITY PROTEIN: zinc finger protein 316-like
putative uncharacterized protein DDB_G0271974
activating signal cointegrator 1 complex subunit 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
multifunctional methyltransferase subunit TRM112-like protein, transcript variant X3
multifunctional methyltransferase subunit TRM112-like protein, transcript variant X2
multifunctional methyltransferase subunit TRM112-like protein, transcript variant X1
multifunctional methyltransferase subunit TRM112-like protein
26S proteasome non-ATPase regulatory subunit 11-like, transcript variant X1
26S proteasome non-ATPase regulatory subunit 11-like isoform X1
26S proteasome non-ATPase regulatory subunit 11-like, transcript variant X2
26S proteasome non-ATPase regulatory subunit 11-like isoform X2
Na(+)/H(+) exchanger protein 2-like, transcript variant X1
Na(+)/H(+) exchanger protein 2-like, transcript variant X2
Na(+)/H(+) exchanger protein 2-like isoform X1
Na(+)/H(+) exchanger protein 2-like isoform X2
anaphase-promoting complex subunit 10-like, transcript variant X1
anaphase-promoting complex subunit 10-like isoform X1
anaphase-promoting complex subunit 10-like, transcript variant X2
anaphase-promoting complex subunit 10-like isoform X2
anaphase-promoting complex subunit 10-like, transcript variant X3
anaphase-promoting complex subunit 10-like, transcript variant X4
anaphase-promoting complex subunit 10-like isoform X3
UDP-sugar transporter UST74c-like, transcript variant X1
UDP-sugar transporter UST74c-like, transcript variant X2
UDP-sugar transporter UST74c-like isoform X1
UDP-sugar transporter UST74c-like isoform X2
atrial natriuretic peptide receptor 2-like
LOW QUALITY PROTEIN: atrial natriuretic peptide receptor 2-like
blastula protease 10-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized protein LOC123502664 isoform X1
blastula protease 10-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 67% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123502666, transcript variant X1
uncharacterized LOC123502666, transcript variant X2
uncharacterized protein LOC123502666 isoform X1
uncharacterized protein LOC123502666 isoform X2
metabotropic glutamate receptor-like, transcript variant X2
metabotropic glutamate receptor-like, transcript variant X1
metabotropic glutamate receptor-like isoform X2
metabotropic glutamate receptor-like isoform X1
transfer RNA alanine (anticodon CGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
gamma-secretase subunit pen-2-like, transcript variant X2
gamma-secretase subunit pen-2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
LOW QUALITY PROTEIN: disks large homolog 5-like
facilitated trehalose transporter Tret1-2 homolog, transcript variant X1
facilitated trehalose transporter Tret1-2 homolog, transcript variant X4
facilitated trehalose transporter Tret1-2 homolog, transcript variant X6
facilitated trehalose transporter Tret1-2 homolog, transcript variant X3
facilitated trehalose transporter Tret1-2 homolog, transcript variant X2
facilitated trehalose transporter Tret1-2 homolog, transcript variant X5
facilitated trehalose transporter Tret1-2 homolog
uncharacterized LOC123502704, transcript variant X3
uncharacterized LOC123502704, transcript variant X6
uncharacterized LOC123502704, transcript variant X1
uncharacterized LOC123502704, transcript variant X2
uncharacterized LOC123502704, transcript variant X4
uncharacterized LOC123502704, transcript variant X5
uncharacterized protein LOC123502704 isoform X1
uncharacterized protein LOC123502704 isoform X2
uncharacterized protein LOC123502704 isoform X3
uncharacterized protein LOC123502704 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized LOC123502686, transcript variant X3
uncharacterized LOC123502686, transcript variant X1
uncharacterized LOC123502686, transcript variant X4
uncharacterized LOC123502686, transcript variant X2
uncharacterized protein LOC123502686 isoform X3
uncharacterized protein LOC123502686 isoform X1
uncharacterized protein LOC123502686 isoform X4
uncharacterized protein LOC123502686 isoform X2
cytosolic phospholipase A2-like, transcript variant X4
cytosolic phospholipase A2-like, transcript variant X6
cytosolic phospholipase A2-like, transcript variant X3
cytosolic phospholipase A2-like, transcript variant X5
cytosolic phospholipase A2-like isoform X3
cytosolic phospholipase A2-like, transcript variant X1
cytosolic phospholipase A2-like isoform X1
cytosolic phospholipase A2-like, transcript variant X2
cytosolic phospholipase A2-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
uncharacterized LOC123502652, transcript variant X1
uncharacterized LOC123502652, transcript variant X2
coiled-coil-helix-coiled-coil-helix domain-containing protein 1-like, transcript variant X1
coiled-coil-helix-coiled-coil-helix domain-containing protein 1-like, transcript variant X2
coiled-coil-helix-coiled-coil-helix domain-containing protein 1-like
zinc finger Ran-binding domain-containing protein 2-like
LOW QUALITY PROTEIN: protein artichoke-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 3 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
LOW QUALITY PROTEIN: uncharacterized protein LOC123502584
transmembrane protein 120 homolog, transcript variant X3
transmembrane protein 120 homolog, transcript variant X2
transmembrane protein 120 homolog, transcript variant X1
transmembrane protein 120 homolog isoform X2
transmembrane protein 120 homolog isoform X1
transmembrane protein 120 homolog isoform X3
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: uncharacterized protein LOC123502641
ATP-binding cassette sub-family F member 1-like
solute carrier organic anion transporter family member 4A1-like
NADP-dependent malic enzyme-like, transcript variant X1
NADP-dependent malic enzyme-like, transcript variant X3
NADP-dependent malic enzyme-like, transcript variant X4
NADP-dependent malic enzyme-like, transcript variant X5
NADP-dependent malic enzyme-like, transcript variant X2
NADP-dependent malic enzyme-like isoform X1
NADP-dependent malic enzyme-like isoform X3
NADP-dependent malic enzyme-like isoform X4
NADP-dependent malic enzyme-like isoform X2
uncharacterized LOC123502779, transcript variant X4
uncharacterized protein LOC123502779 isoform X3
uncharacterized LOC123502779, transcript variant X3
uncharacterized protein LOC123502779 isoform X2
uncharacterized LOC123502779, transcript variant X1
uncharacterized LOC123502779, transcript variant X2
uncharacterized protein LOC123502779 isoform X1
uncharacterized LOC123502779, transcript variant X5
uncharacterized protein LOC123502779 isoform X4
putative carbonic anhydrase 3, transcript variant X1
putative carbonic anhydrase 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 162 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
zinc finger protein 98-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
zinc finger protein 98-like, transcript variant X3
zinc finger protein 98-like, transcript variant X1
alpha-(1,3)-fucosyltransferase C-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
alpha-(1,3)-fucosyltransferase C-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
alpha-(1,3)-fucosyltransferase 7-like isoform X1
alpha-(1,3)-fucosyltransferase C-like isoform X2
DNA (cytosine-5)-methyltransferase 3A-like
similar to RNA sequence, mRNA (same species):INSD:MH107032.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 229 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 long SRA reads, and 98% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 229 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC123502580
Down syndrome cell adhesion molecule-like protein Dscam2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 96% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123502790, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
uncharacterized LOC123502790, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80% coverage of the annotated genomic feature by RNAseq alignments
translation initiation factor IF-2-like, transcript variant X1
translation initiation factor IF-2-like, transcript variant X3
translation initiation factor IF-2-like isoform X2
translation initiation factor IF-2-like, transcript variant X2
location of vulva defective 1-like isoform X1
uncharacterized LOC123502827, transcript variant X3
uncharacterized LOC123502827, transcript variant X4
uncharacterized LOC123502827, transcript variant X2
uncharacterized LOC123502827, transcript variant X1
uncharacterized LOC123502827, transcript variant X6
uncharacterized LOC123502827, transcript variant X5
caM kinase-like vesicle-associated protein, transcript variant X1
caM kinase-like vesicle-associated protein, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
caM kinase-like vesicle-associated protein
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like, transcript variant X2
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like, transcript variant X5
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform X1
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like, transcript variant X6
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform X2
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
enhancer of mRNA-decapping protein 3-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
enhancer of mRNA-decapping protein 3-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
enhancer of mRNA-decapping protein 3-like
renin receptor-like, transcript variant X1
renin receptor-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82% coverage of the annotated genomic feature by RNAseq alignments
putative nuclease HARBI1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
putative nuclease HARBI1, transcript variant X3
putative nuclease HARBI1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
molybdate-anion transporter-like, transcript variant X2
molybdate-anion transporter-like, transcript variant X1
molybdate-anion transporter-like isoform X1
molybdate-anion transporter-like isoform X2
cAMP-responsive element-binding protein-like 2, transcript variant X3
cAMP-responsive element-binding protein-like 2, transcript variant X1
cAMP-responsive element-binding protein-like 2, transcript variant X2
cAMP-responsive element-binding protein-like 2, transcript variant X4
cAMP-responsive element-binding protein-like 2 isoform X3
cAMP-responsive element-binding protein-like 2 isoform X4
protein bric-a-brac 1-like, transcript variant X1
protein bric-a-brac 1-like, transcript variant X3
protein bric-a-brac 1-like, transcript variant X2
protein bric-a-brac 1-like, transcript variant X4
protein tramtrack, alpha isoform-like isoform X1
uncharacterized LOC123502602, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
uncharacterized LOC123502602, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
uncharacterized protein LOC123502602 isoform X1
uncharacterized protein LOC123502602 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123502605, transcript variant X1
uncharacterized LOC123502605, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00003
piggyBac transposable element-derived protein 3-like
LOW QUALITY PROTEIN: piggyBac transposable element-derived protein 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments