Portunus trituberculatus isolate SZX2019 chromosome 6, ASM1759143v1, whole genome shotgun sequence.
Portunus trituberculatus (swimming crab)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Brachyura; Eubrachyura; Portunoidea; Portunidae; Portunus.
REFSEQ INFORMATION: The reference sequence is identical to\nCM030076.1.\nAssembly name: ASM1759143v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Center for Ecological and\nEnvironmental Sciences on 2021/03/30. The original whole-genome\nshotgun project has the accession JAGGDN000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Center for Ecological and Environmental\n Sciences\nAssembly Method :: Wtdbg v. 2.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 54.74x\nSequencing Technology :: Oxford Nanopore; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Portunus trituberculatus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC123517370, transcript variant X1
COORDINATES: polyA evidence [ECO:0006239]
uncharacterized LOC123517370, transcript variant X2
uncharacterized LOC123517370, transcript variant X3
uncharacterized LOC123517370, transcript variant X4
uncharacterized LOC123517370, transcript variant X5
uncharacterized LOC123517139, transcript variant X1
uncharacterized LOC123517139, transcript variant X3
uncharacterized LOC123517139, transcript variant X2
glycine receptor subunit alpha-4-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
glycine receptor subunit alpha-4-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
glycine receptor subunit alpha-4-like isoform X1
glycine receptor subunit alpha-4-like isoform X2
rab11 family-interacting protein 4B-like, transcript variant X10
rab11 family-interacting protein 4B-like, transcript variant X5
rab11 family-interacting protein 4B-like, transcript variant X3
rab11 family-interacting protein 4B-like, transcript variant X1
rab11 family-interacting protein 4B-like, transcript variant X9
rab11 family-interacting protein 4B-like, transcript variant X8
rab11 family-interacting protein 4B-like, transcript variant X11
rab11 family-interacting protein 4B-like, transcript variant X7
rab11 family-interacting protein 4B-like, transcript variant X6
rab11 family-interacting protein 4B-like, transcript variant X4
rab11 family-interacting protein 4B-like, transcript variant X2
rab11 family-interacting protein 4B-like isoform X9
rab11 family-interacting protein 4B-like isoform X8
rab11 family-interacting protein 4B-like isoform X11
rab11 family-interacting protein 4B-like isoform X7
rab11 family-interacting protein 4B-like isoform X6
rab11 family-interacting protein 4B-like isoform X4
rab11 family-interacting protein 4B-like isoform X2
rab11 family-interacting protein 4B-like isoform X10
rab11 family-interacting protein 4B-like isoform X5
rab11 family-interacting protein 4B-like isoform X3
rab11 family-interacting protein 4B-like isoform X1
octopamine receptor beta-2R-like, transcript variant X3
octopamine receptor beta-2R-like, transcript variant X1
octopamine receptor beta-2R-like, transcript variant X2
ras-related protein M-Ras-like, transcript variant X3
ras-related protein M-Ras-like, transcript variant X1
ras-related protein M-Ras-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 45% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
DNA-directed RNA polymerase II subunit RPB1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
integrin alpha-PS2-like, transcript variant X3
integrin alpha-PS2-like, transcript variant X5
integrin alpha-PS2-like, transcript variant X2
integrin alpha-PS2-like, transcript variant X1
integrin alpha-PS2-like, transcript variant X6
integrin alpha-PS2-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
protein CASC3-like, transcript variant X1
protein CASC3-like, transcript variant X2
protein SEC13 homolog, transcript variant X2
protein SEC13 homolog, transcript variant X1
CRAL-TRIO domain-containing protein C589.09, mitochondrial-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
CRAL-TRIO domain-containing protein C589.09, mitochondrial-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
CRAL-TRIO domain-containing protein C589.09, mitochondrial-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
CRAL-TRIO domain-containing protein C589.09, mitochondrial-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 4 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: protein virilizer-like
eukaryotic translation initiation factor 2 subunit 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 26 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123517307, transcript variant X1
uncharacterized LOC123517307, transcript variant X3
uncharacterized LOC123517307, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
E3 ubiquitin-protein ligase Rnf220-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
E3 ubiquitin-protein ligase Rnf220-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
E3 ubiquitin-protein ligase Rnf220-like isoform X1
E3 ubiquitin-protein ligase Rnf220-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123516430, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized LOC123516430, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized LOC123516430, transcript variant X5
uncharacterized LOC123516430, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
uncharacterized LOC123516430, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
uncharacterized LOC123516430, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
uncharacterized LOC123516430, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
uncharacterized LOC123516430, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
uncharacterized protein LOC123516430 isoform X3
uncharacterized protein LOC123516430 isoform X2
uncharacterized protein LOC123516430 isoform X1
39S ribosomal protein L15, mitochondrial-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: 39S ribosomal protein L15, mitochondrial-like
probable H/ACA ribonucleoprotein complex subunit 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
LOW QUALITY PROTEIN: protein nubbin-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52% coverage of the annotated genomic feature by RNAseq alignments
isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
defective chorion-1 protein, FC177 isoform-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
tyrosine-protein kinase Fer-like, transcript variant X4
tyrosine-protein kinase Fer-like, transcript variant X5
tyrosine-protein kinase Fer-like, transcript variant X2
tyrosine-protein kinase Fer-like, transcript variant X3
tyrosine-protein kinase Fer-like, transcript variant X1
tyrosine-protein kinase Fer-like isoform X2
tyrosine-protein kinase Fer-like isoform X3
tyrosine-protein kinase Fer-like isoform X1
tyrosine-protein kinase Fer-like isoform X4
transfer RNA proline (anticodon AGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA proline (anticodon CGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
islet cell autoantigen 1-like, transcript variant X1
islet cell autoantigen 1-like, transcript variant X2
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like, transcript variant X1
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like, transcript variant X2
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like
glutamic acid-rich protein-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
glutamic acid-rich protein-like isoform X2
glutamic acid-rich protein-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
glutamic acid-rich protein-like isoform X1
C-1-tetrahydrofolate synthase, cytoplasmic-like, transcript variant X1
C-1-tetrahydrofolate synthase, cytoplasmic-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 long SRA reads, 55 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
C-1-tetrahydrofolate synthase, cytoplasmic-like, transcript variant X3
C-1-tetrahydrofolate synthase, cytoplasmic-like, transcript variant X2
C-1-tetrahydrofolate synthase, cytoplasmic-like isoform X2
C-1-tetrahydrofolate synthase, cytoplasmic-like isoform X1
uncharacterized LOC123517921, transcript variant X2
uncharacterized LOC123517921, transcript variant X1
uncharacterized protein F13E9.13, mitochondrial-like, transcript variant X1
uncharacterized protein F13E9.13, mitochondrial-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
uncharacterized protein F13E9.13, mitochondrial-like
transfer RNA valine (anticodon GAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
LOW QUALITY PROTEIN: homeobox protein MSX-2-like
probable ATP-dependent RNA helicase DDX47, transcript variant X1
probable ATP-dependent RNA helicase DDX47 isoform X1
probable ATP-dependent RNA helicase DDX47, transcript variant X2
probable ATP-dependent RNA helicase DDX47 isoform X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: HSPB1-associated protein 1 homolog
LOW QUALITY PROTEIN: uncharacterized protein LOC123516887
ATP-binding cassette sub-family G member 1-like, transcript variant X1
ATP-binding cassette sub-family G member 4-like isoform X1
ATP-binding cassette sub-family G member 1-like, transcript variant X2
ATP-binding cassette sub-family G member 1-like isoform X2
LOW QUALITY PROTEIN: uncharacterized protein LOC123518144
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
DNA repair protein complementing XP-C cells homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123518199, transcript variant X1
uncharacterized LOC123518199, transcript variant X2
uncharacterized protein LOC123518199 isoform X1
uncharacterized protein LOC123518199 isoform X2
adenosine kinase-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
adenosine kinase-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
adenosine kinase-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
discoidin domain-containing receptor 2-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
LOW QUALITY PROTEIN: discoidin domain-containing receptor 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: TNF receptor-associated factor 6-like
fucose-1-phosphate guanylyltransferase-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: fucose-1-phosphate guanylyltransferase-like
beclin 1-associated autophagy-related key regulator-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
LOW QUALITY PROTEIN: beclin 1-associated autophagy-related key regulator-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
uncharacterized LOC123518298, transcript variant X2
uncharacterized LOC123518298, transcript variant X1
LOW QUALITY PROTEIN: uncharacterized protein LOC123518276
uncharacterized LOC123518346, transcript variant X2
uncharacterized LOC123518346, transcript variant X1
uncharacterized protein LOC123518346 isoform X1
uncharacterized protein LOC123518346 isoform X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: extended synaptotagmin-1-like
nitric oxide synthase-interacting protein homolog, transcript variant X1
nitric oxide synthase-interacting protein homolog, transcript variant X2
nitric oxide synthase-interacting protein homolog, transcript variant X3
nitric oxide synthase-interacting protein homolog
solute carrier family 35 member E2A-like, transcript variant X3
solute carrier family 35 member E2A-like isoform X3
solute carrier family 35 member E2A-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
solute carrier family 35 member E2A-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
tigger transposable element-derived protein 7-like isoform X1
tigger transposable element-derived protein 7-like isoform X2
LOW QUALITY PROTEIN: uncharacterized protein LOC123516892
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: formin-like protein 5
LOW QUALITY PROTEIN: lysoplasmalogenase-like protein TMEM86A
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: glutamyl aminopeptidase-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 4 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: AF4/FMR2 family member lilli-like
dynein axonemal intermediate chain 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
acetylcholine receptor subunit beta-like 1
transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 long SRA reads, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
monocarboxylate transporter 9-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
monocarboxylate transporter 9-like, transcript variant X4
monocarboxylate transporter 9-like, transcript variant X2
monocarboxylate transporter 9-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
monocarboxylate transporter 9-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
monocarboxylate transporter 9-like, transcript variant X6
monocarboxylate transporter 9-like isoform X2
monocarboxylate transporter 9-like isoform X1
eukaryotic translation initiation factor 3 subunit J-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: calmodulin-like protein 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
4-hydroxyphenylpyruvate dioxygenase-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 6 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
protein downstream neighbor of son homolog
ras GTPase-activating protein-binding protein 2-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: ras GTPase-activating protein-binding protein 2-like
serine/arginine repetitive matrix protein 2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
serine/arginine repetitive matrix protein 2-like, transcript variant X2
serine/arginine repetitive matrix protein 2-like isoform X2
serine/arginine repetitive matrix protein 2-like isoform X1
serine/arginine repetitive matrix protein 2-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
serine/arginine repetitive matrix protein 2-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
serine/arginine repetitive matrix protein 2-like isoform X4
serine/arginine repetitive matrix protein 2-like isoform X3
xaa-Pro aminopeptidase 3-like, transcript variant X1
xaa-Pro aminopeptidase 3-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
xaa-Pro aminopeptidase 3-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
xaa-Pro aminopeptidase 3-like isoform X1
xaa-Pro aminopeptidase 3-like isoform X2
xaa-Pro aminopeptidase 3-like isoform X3
protein O-GlcNAcase-like, transcript variant X2
protein O-GlcNAcase-like, transcript variant X1
protein O-GlcNAcase-like, transcript variant X3
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 long SRA reads, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC123517577, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
uncharacterized LOC123517577, transcript variant X2
uncharacterized LOC123518111, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
uncharacterized LOC123518111, transcript variant X4
uncharacterized LOC123518111, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
uncharacterized LOC123518111, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
serine/threonine-protein kinase SIK2-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
LOW QUALITY PROTEIN: queuosine salvage protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
LOW QUALITY PROTEIN: uncharacterized protein LOC123518568
receptor-type guanylate cyclase Gyc76C-like, transcript variant X1
receptor-type guanylate cyclase Gyc76C-like, transcript variant X2
receptor-type guanylate cyclase Gyc76C-like, transcript variant X3
receptor-type guanylate cyclase Gyc76C-like, transcript variant X4
receptor-type guanylate cyclase Gyc76C-like, transcript variant X5
receptor-type guanylate cyclase Gyc76C-like isoform X1
receptor-type guanylate cyclase Gyc76C-like isoform X2
receptor-type guanylate cyclase Gyc76C-like isoform X3
receptor-type guanylate cyclase Gyc76C-like isoform X4
receptor-type guanylate cyclase Gyc76C-like isoform X5
carbonyl reductase [NADPH] 3-like, transcript variant X6
uncharacterized LOC123516544, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC123516544, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123516544, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
carbonyl reductase [NADPH] 3-like, transcript variant X3
carbonyl reductase [NADPH] 3-like, transcript variant X7
carbonyl reductase [NADPH] 3-like, transcript variant X5
carbonyl reductase [NADPH] 3-like, transcript variant X4
carbonyl reductase [NADPH] 3-like, transcript variant X1
carbonyl reductase [NADPH] 3-like, transcript variant X2
probable ATP-dependent RNA helicase ddx20
acyl-CoA synthetase short-chain family member 3, mitochondrial-like
secreted protein C-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
secreted protein C-like, transcript variant X1
uncharacterized LOC123516566, transcript variant X6
uncharacterized LOC123516566, transcript variant X4
uncharacterized LOC123516566, transcript variant X5
uncharacterized LOC123516566, transcript variant X13
uncharacterized LOC123516566, transcript variant X8
uncharacterized LOC123516566, transcript variant X10
uncharacterized LOC123516566, transcript variant X7
uncharacterized LOC123516566, transcript variant X3
uncharacterized LOC123516566, transcript variant X2
uncharacterized LOC123516566, transcript variant X1
uncharacterized LOC123516566, transcript variant X9
uncharacterized LOC123516566, transcript variant X11
uncharacterized LOC123516566, transcript variant X12
uncharacterized protein LOC123516566 isoform X2
uncharacterized protein LOC123516566 isoform X1
transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
glutamine synthetase, transcript variant X4
glutamine synthetase, transcript variant X5
glutamine synthetase, transcript variant X1
glutamine synthetase, transcript variant X2
glutamine synthetase, transcript variant X3
THO complex subunit 6 homolog, transcript variant X2
THO complex subunit 6 homolog, transcript variant X1
THO complex subunit 6 homolog isoform X1
THO complex subunit 6 homolog isoform X2
THO complex subunit 6 homolog, transcript variant X3
THO complex subunit 6 homolog isoform X3
phenoloxidase-activating factor 2-like, transcript variant X1
phenoloxidase-activating factor 2-like, transcript variant X2
endosome/lysosome-associated apoptosis and autophagy regulator family member 2-like, transcript variant X1
endosome/lysosome-associated apoptosis and autophagy regulator family member 2-like, transcript variant X2
endosome/lysosome-associated apoptosis and autophagy regulator family member 2-like isoform X1
endosome/lysosome-associated apoptosis and autophagy regulator family member 2-like isoform X2
zinc finger protein 865-like, transcript variant X2
zinc finger protein 865-like, transcript variant X3
zinc finger protein 865-like, transcript variant X1
zinc finger protein 865-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
uncharacterized LOC123517574, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized LOC123517574, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
uncharacterized LOC123517574, transcript variant X2
limbic system-associated membrane protein-like, transcript variant X3
limbic system-associated membrane protein-like, transcript variant X2
limbic system-associated membrane protein-like, transcript variant X1
limbic system-associated membrane protein-like isoform X1
limbic system-associated membrane protein-like isoform X2
limbic system-associated membrane protein-like isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 56% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
roundabout homolog 3-like, transcript variant X1
roundabout homolog 3-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 62% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
uncharacterized LOC123517913, transcript variant X1
uncharacterized LOC123517913, transcript variant X2
RUS family member 1-like, transcript variant X4
RUS family member 1-like, transcript variant X2
RUS family member 1-like, transcript variant X3
RUS family member 1-like, transcript variant X1
MDS1 and EVI1 complex locus protein EVI1-A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00319
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
probable serine/threonine-protein kinase DDB_G0278901
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transfer RNA alanine (anticodon AGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
serine/arginine repetitive matrix protein 2-like
LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 2-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: Golgi apparatus protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 46 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
cytochrome b5-like, transcript variant X2
cytochrome b5-like, transcript variant X3
cytochrome b5-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
mitochondrial ribosome-associated GTPase 1-like
ankyrin repeat domain-containing protein 49-like
LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 49-like
poly(rC)-binding protein 3-like, transcript variant X1
poly(rC)-binding protein 3-like, transcript variant X2
poly(rC)-binding protein 3-like isoform X1
poly(rC)-binding protein 3-like isoform X2
uncharacterized LOC123518617, transcript variant X2
uncharacterized LOC123518617, transcript variant X1
proto-oncogene tyrosine-protein kinase ROS-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 7 bases in 4 codons; deleted 3 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 7 bases in 4 codons; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: proto-oncogene tyrosine-protein kinase ROS-like
TLC domain-containing protein 3A-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
TLC domain-containing protein 3A-like, transcript variant X6
TLC domain-containing protein 3A-like, transcript variant X1
TLC domain-containing protein 3A-like, transcript variant X5
uncharacterized LOC123517693, transcript variant X3
uncharacterized LOC123517693, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123517693, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
TLC domain-containing protein 3A-like, transcript variant X7
TLC domain-containing protein 3A-like, transcript variant X3
TLC domain-containing protein 3A-like, transcript variant X2
TLC domain-containing protein 3A-like isoform X1
TLC domain-containing protein 3A-like isoform X2
TLC domain-containing protein 3A-like isoform X3
uncharacterized LOC123517702, transcript variant X1
uncharacterized LOC123517702, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized LOC123517679, transcript variant X2
uncharacterized LOC123517679, transcript variant X1
uncharacterized LOC123517638, transcript variant X9
uncharacterized LOC123517638, transcript variant X1
uncharacterized LOC123517638, transcript variant X3
uncharacterized LOC123517638, transcript variant X8
uncharacterized LOC123517638, transcript variant X5
uncharacterized LOC123517638, transcript variant X2
uncharacterized LOC123517638, transcript variant X4
uncharacterized LOC123517638, transcript variant X7
uncharacterized LOC123517638, transcript variant X6
uncharacterized protein LOC123517638 isoform X2
uncharacterized protein LOC123517638 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
phospholipase D gamma 1-like, transcript variant X3
phospholipase D gamma 1-like, transcript variant X4
phospholipase D gamma 1-like, transcript variant X2
phospholipase D gamma 1-like, transcript variant X1
phospholipase D gamma 1-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
conserved oligomeric Golgi complex subunit 2-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 2-like
CCAAT/enhancer-binding protein zeta-like
LOW QUALITY PROTEIN: CCAAT/enhancer-binding protein zeta-like
LYR motif-containing protein 1-like, transcript variant X1
LYR motif-containing protein 1-like, transcript variant X2
LYR motif-containing protein 1-like, transcript variant X3
LYR motif-containing protein 1-like isoform X1
LYR motif-containing protein 1-like isoform X2
tigger transposable element-derived protein 1-like, transcript variant X4
tigger transposable element-derived protein 1-like, transcript variant X3
tigger transposable element-derived protein 1-like, transcript variant X1
tigger transposable element-derived protein 1-like, transcript variant X2
tigger transposable element-derived protein 1-like
probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase
activating signal cointegrator 1 complex subunit 3-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 3-like
broad-complex core protein isoforms 1/2/3/4/5-like, transcript variant X1
broad-complex core protein isoforms 1/2/3/4/5-like, transcript variant X3
broad-complex core protein isoforms 1/2/3/4/5-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
nascent polypeptide-associated complex subunit alpha, muscle-specific form-like isoform X1
broad-complex core protein isoforms 1/2/3/4/5-like isoform X3
broad-complex core protein isoforms 1/2/3/4/5-like isoform X5
broad-complex core protein isoforms 1/2/3/4/5-like, transcript variant X2
broad-complex core protein isoforms 1/2/3/4/5-like, transcript variant X4
nascent polypeptide-associated complex subunit alpha, muscle-specific form-like isoform X2
broad-complex core protein isoforms 1/2/3/4/5-like isoform X4
soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
major facilitator superfamily domain-containing protein 12-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
PDZ domain-containing protein 7-like, transcript variant X3
PDZ domain-containing protein 7-like, transcript variant X2
PDZ domain-containing protein 7-like, transcript variant X1
PDZ domain-containing protein 7-like, transcript variant X4
PDZ domain-containing protein 7-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 148 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
LOW QUALITY PROTEIN: uncharacterized protein LOC123518680
uncharacterized LOC123518721, transcript variant X2
uncharacterized LOC123518721, transcript variant X1
uncharacterized protein LOC123518721 isoform X2
uncharacterized protein LOC123518721 isoform X1
LOW QUALITY PROTEIN: 3'-5' RNA helicase YTHDC2-like
transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
G protein pathway suppressor 2-like, transcript variant X2
G protein pathway suppressor 2-like, transcript variant X3
G protein pathway suppressor 2-like, transcript variant X1
G protein pathway suppressor 2-like isoform X1
G protein pathway suppressor 2-like isoform X2
E3 ubiquitin-protein ligase TRIM9-like, transcript variant X2
E3 ubiquitin-protein ligase TRIM9-like, transcript variant X1
uncharacterized LOC123518773, transcript variant X2
uncharacterized LOC123518773, transcript variant X1
uncharacterized protein LOC123518773 isoform X2
uncharacterized protein LOC123518773 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments
zinc finger protein 347-like, transcript variant X1
zinc finger protein 347-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
uncharacterized LOC123518002, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
uncharacterized LOC123518002, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA leucine (anticodon CAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
zinc finger BED domain-containing protein 5-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA leucine (anticodon UAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
neuronal membrane glycoprotein M6-a-like, transcript variant X2
neuronal membrane glycoprotein M6-a-like, transcript variant X1
neuronal membrane glycoprotein M6-a-like, transcript variant X3
neuronal membrane glycoprotein M6-a-like, transcript variant X4
neuronal membrane glycoprotein M6-a-like isoform X2
neuronal membrane glycoprotein M6-a-like isoform X1
neuronal membrane glycoprotein M6-a-like isoform X3
neuronal membrane glycoprotein M6-a-like isoform X4
2'-deoxynucleoside 5'-phosphate N-hydrolase 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
luciferin 4-monooxygenase-like, transcript variant X2
luciferin 4-monooxygenase-like, transcript variant X1
luciferin 4-monooxygenase-like isoform X1
luciferin 4-monooxygenase-like isoform X2
COORDINATES: nucleotide motif:Rfam:12.0:RF00015
uncharacterized LOC123517188, transcript variant X1
uncharacterized LOC123517188, transcript variant X2
uncharacterized protein LOC123517188 isoform X1
uncharacterized protein LOC123517188 isoform X2
histone-lysine N-methyltransferase SETMAR-like
general transcription factor II-I repeat domain-containing protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
lysosomal acid glucosylceramidase-like, transcript variant X2
lysosomal acid glucosylceramidase-like, transcript variant X1
lysosomal acid glucosylceramidase-like isoform X2
lysosomal acid glucosylceramidase-like isoform X1
putative transcription factor SPT20 homolog-like 2
LOW QUALITY PROTEIN: putative transcription factor SPT20 homolog-like 2
ribosome biogenesis protein NSA2 homolog, transcript variant X1
ribosome biogenesis protein NSA2 homolog, transcript variant X2
ribosome biogenesis protein NSA2 homolog
piggyBac transposable element-derived protein 4-like