Portunus trituberculatus isolate SZX2019 chromosome 5, ASM1759143v1, whole genome shotgun sequence.
Portunus trituberculatus (swimming crab)
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Brachyura; Eubrachyura; Portunoidea; Portunidae; Portunus.
REFSEQ INFORMATION: The reference sequence is identical to\nCM030075.1.\nAssembly name: ASM1759143v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Center for Ecological and\nEnvironmental Sciences on 2021/03/30. The original whole-genome\nshotgun project has the accession JAGGDN000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Center for Ecological and Environmental\n Sciences\nAssembly Method :: Wtdbg v. 2.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 54.74x\nSequencing Technology :: Oxford Nanopore; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Portunus trituberculatus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 87% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123516246, transcript variant X3
COORDINATES: polyA evidence [ECO:0006239]
uncharacterized LOC123516246, transcript variant X2
uncharacterized LOC123516246, transcript variant X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: transmembrane protein 131-like
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon UAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 30 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: ELMO domain-containing protein 2-like
protein bicaudal C homolog 1-like, transcript variant X1
protein bicaudal C homolog 1-like, transcript variant X2
protein bicaudal C homolog 1-like, transcript variant X3
protein bicaudal C homolog 1-B-like isoform X1
protein bicaudal C homolog 1-B-like isoform X2
protein bicaudal C homolog 1-like isoform X3
protein bicaudal C homolog 1-like, transcript variant X5
protein bicaudal C homolog 1-B-like isoform X5
transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
protein bicaudal C homolog 1-like, transcript variant X4
soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like
L-asparaginase 1-like, transcript variant X2
L-asparaginase 1-like, transcript variant X1
L-asparaginase 1-like, transcript variant X4
transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
L-asparaginase 1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
piggyBac transposable element-derived protein 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60% coverage of the annotated genomic feature by RNAseq alignments
leucine-rich repeat extensin-like protein 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
putative glycine-rich cell wall structural protein 1, transcript variant X3
putative glycine-rich cell wall structural protein 1, transcript variant X2
putative glycine-rich cell wall structural protein 1, transcript variant X1
putative glycine-rich cell wall structural protein 1 isoform X3
putative glycine-rich cell wall structural protein 1 isoform X2
glycine-rich cell wall structural protein 2-like isoform X1
putative zinc finger protein 66, transcript variant X1
putative zinc finger protein 66, transcript variant X2
uncharacterized LOC123514473, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC123514473, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC123514446, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized LOC123514446, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized LOC123514446, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
beta-1,3-galactosyltransferase 1-like, transcript variant X2
similar to RNA sequence (same species):INSD:GFFJ01092751.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 147 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 13 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized protein LOC123514679 isoform X2
beta-1,3-galactosyltransferase 1-like, transcript variant X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 147 bases not found in genome assembly
beta-1,3-galactosyltransferase 1-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
piggyBac transposable element-derived protein 4-like
classical arabinogalactan protein 9-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123514580, transcript variant X1
uncharacterized LOC123514580, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
suppressor protein SRP40-like, transcript variant X8
suppressor protein SRP40-like, transcript variant X4
suppressor protein SRP40-like, transcript variant X2
suppressor protein SRP40-like, transcript variant X3
suppressor protein SRP40-like, transcript variant X1
suppressor protein SRP40-like, transcript variant X6
uncharacterized protein LOC123514603 isoform X8
uncharacterized protein LOC123514603 isoform X4
uncharacterized protein LOC123514603 isoform X3
suppressor protein SRP40-like isoform X2
suppressor protein SRP40-like isoform X1
suppressor protein SRP40-like isoform X6
suppressor protein SRP40-like, transcript variant X7
suppressor protein SRP40-like, transcript variant X5
uncharacterized protein LOC123514603 isoform X7
suppressor protein SRP40-like isoform X5
chitooligosaccharidolytic beta-N-acetylglucosaminidase-like
cilia- and flagella-associated protein 251-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
cilia- and flagella-associated protein 251-like, transcript variant X1
cilia- and flagella-associated protein 251-like, transcript variant X2
cilia- and flagella-associated protein 251-like isoform X1
cilia- and flagella-associated protein 251-like isoform X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: carboxypeptidase B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
uncharacterized LOC123515921, transcript variant X1
uncharacterized LOC123515921, transcript variant X2
uncharacterized protein LOC123515921 isoform X1
uncharacterized protein LOC123515921 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: uncharacterized protein LOC123515959
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
coiled-coil domain-containing protein 63-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
LOW QUALITY PROTEIN: cyclin-dependent kinase 11B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
probable G-protein coupled receptor Mth-like 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
probable G-protein coupled receptor Mth-like 3 isoform X1
probable G-protein coupled receptor Mth-like 3, transcript variant X2
probable G-protein coupled receptor Mth-like 3 isoform X2
uncharacterized LOC123514282, transcript variant X2
uncharacterized LOC123514282, transcript variant X1
uncharacterized protein LOC123514282 isoform X1
uncharacterized protein LOC123514282 isoform X2
26S proteasome non-ATPase regulatory subunit 5-like
LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 5-like
uncharacterized LOC123515065, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
uncharacterized LOC123515065, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
uncharacterized LOC123515065, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
uncharacterized LOC123515065, transcript variant X4
uncharacterized protein LOC123515065 isoform X2
uncharacterized protein LOC123515065 isoform X1
uncharacterized protein LOC123515065 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC123515104, transcript variant X3
uncharacterized LOC123515104, transcript variant X2
uncharacterized LOC123515104, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
protein HGV2-like, transcript variant X4
protein HGV2-like, transcript variant X1
protein HGV2-like, transcript variant X2
protein HGV2-like, transcript variant X3
serine/arginine repetitive matrix protein 1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
serine/arginine repetitive matrix protein 1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
serine/arginine repetitive matrix protein 1-like
transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 6 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
LOW QUALITY PROTEIN: glycerol-3-phosphate phosphatase-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
ras-related protein Rab-37-like, transcript variant X1
ras-related protein Rab-37-like, transcript variant X2
ras-related protein Rab-37-like, transcript variant X4
ras-related protein Rab-37-like, transcript variant X3
uncharacterized LOC123513536, transcript variant X1
uncharacterized LOC123513536, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
fibroblast growth factor receptor-like 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
fibroblast growth factor receptor-like 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
fibroblast growth factor receptor-like 1 isoform X1
fibroblast growth factor receptor-like 1 isoform X2
synaptic vesicular amine transporter-like
sphingosine-1-phosphate phosphatase 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
small integral membrane protein 12-A-like
SET domain-containing protein SmydA-8-like, transcript variant X1
SET domain-containing protein SmydA-8-like, transcript variant X2
SET domain-containing protein SmydA-8-like isoform X2
SET domain-containing protein SmydA-8-like isoform X1
SET domain-containing protein SmydA-8-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: SET domain-containing protein SmydA-8-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
uncharacterized LOC123513599, transcript variant X2
uncharacterized LOC123513599, transcript variant X1
ufm1-specific protease 1-like, transcript variant X1
ufm1-specific protease 1-like, transcript variant X2
ufm1-specific protease 1-like, transcript variant X3
transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC123513709, transcript variant X2
uncharacterized LOC123513709, transcript variant X1
uncharacterized LOC123513709, transcript variant X5
uncharacterized LOC123513709, transcript variant X4
uncharacterized LOC123513709, transcript variant X3
uncharacterized LOC123513709, transcript variant X6
uncharacterized protein LOC123513709 isoform X2
uncharacterized protein LOC123513709 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
serine/arginine repetitive matrix protein 2-like, transcript variant X2
serine/arginine repetitive matrix protein 2-like, transcript variant X1
serine/arginine repetitive matrix protein 2-like, transcript variant X6
serine/arginine repetitive matrix protein 2-like, transcript variant X5
serine/arginine repetitive matrix protein 2-like, transcript variant X3
serine/arginine repetitive matrix protein 2-like, transcript variant X4
serine/arginine repetitive matrix protein 2-like isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
phospholipid phosphatase 5-like, transcript variant X1
phospholipid phosphatase 5-like, transcript variant X3
phospholipid phosphatase 5-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
phospholipid phosphatase 5-like isoform X1
phospholipid phosphatase 5-like isoform X3
phospholipid phosphatase 5-like isoform X2
5'-AMP-activated protein kinase subunit beta-1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
LOW QUALITY PROTEIN: homeobox protein Nkx-2.8-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized protein ZK1073.1-like, transcript variant X2
uncharacterized protein ZK1073.1-like, transcript variant X1
uncharacterized protein ZK1073.1-like, transcript variant X3
uncharacterized protein ZK1073.1-like isoform X2
uncharacterized protein ZK1073.1-like isoform X1
uncharacterized protein ZK1073.1-like isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
nuclear pore complex protein Nup98-Nup96-like, transcript variant X6
nuclear pore complex protein Nup98-Nup96-like, transcript variant X5
nuclear pore complex protein Nup98-Nup96-like, transcript variant X8
nuclear pore complex protein Nup98-Nup96-like, transcript variant X3
nuclear pore complex protein Nup98-Nup96-like, transcript variant X1
nuclear pore complex protein Nup98-Nup96-like, transcript variant X2
nuclear pore complex protein Nup98-Nup96-like, transcript variant X7
nuclear pore complex protein Nup98-Nup96-like, transcript variant X4
nuclear pore complex protein Nup98-Nup96-like, transcript variant X9
nuclear pore complex protein Nup98-Nup96-like, transcript variant X10
nuclear pore complex protein Nup98-Nup96-like
17-beta-hydroxysteroid dehydrogenase type 6-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
mitotic spindle assembly checkpoint protein MAD2B-like, transcript variant X3
mitotic spindle assembly checkpoint protein MAD2B-like, transcript variant X1
mitotic spindle assembly checkpoint protein MAD2B-like, transcript variant X4
mitotic spindle assembly checkpoint protein MAD2B-like, transcript variant X2
mitotic spindle assembly checkpoint protein MAD2B-like, transcript variant X5
mitotic spindle assembly checkpoint protein MAD2B-like isoform X1
mitotic spindle assembly checkpoint protein MAD2B-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA leucine (anticodon CAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123513124, transcript variant X2
uncharacterized LOC123513124, transcript variant X1
uncharacterized protein LOC123513124 isoform X2
uncharacterized protein LOC123513124 isoform X1
serine/threonine-protein kinase DDB_G0283821-like, transcript variant X2
serine/threonine-protein kinase DDB_G0283821-like, transcript variant X3
serine/threonine-protein kinase DDB_G0283821-like, transcript variant X1
serine/threonine-protein kinase DDB_G0283821-like, transcript variant X4
serine/threonine-protein kinase DDB_G0283821-like
PAXIP1-associated glutamate-rich protein 1-like
acyl-coenzyme A oxidase 3, peroxisomal-like, transcript variant X3
acyl-coenzyme A oxidase 3, peroxisomal-like, transcript variant X1
acyl-coenzyme A oxidase 3, peroxisomal-like, transcript variant X2
acyl-coenzyme A oxidase 3, peroxisomal-like isoform X1
acyl-coenzyme A oxidase 3, peroxisomal-like isoform X2
uncharacterized LOC123513179, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
uncharacterized LOC123513179, transcript variant X2
uncharacterized LOC123513179, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transfer RNA arginine (anticodon CCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
uncharacterized protein LOC123513196 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
basic salivary proline-rich protein 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00618
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
armadillo repeat-containing protein 1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
armadillo repeat-containing protein 1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
armadillo repeat-containing protein 1-like
venom serine protease Bi-VSP-like, transcript variant X1
venom serine protease Bi-VSP-like, transcript variant X2
venom serine protease Bi-VSP-like isoform X1
venom serine protease Bi-VSP-like isoform X2
uncharacterized LOC123513220, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
uncharacterized LOC123513220, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
uncharacterized LOC123513235, transcript variant X1
uncharacterized LOC123513235, transcript variant X5
uncharacterized LOC123513235, transcript variant X4
uncharacterized LOC123513235, transcript variant X3
uncharacterized protein LOC123513235 isoform X1
uncharacterized LOC123513235, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
uncharacterized protein LOC123513235 isoform X2
transfer RNA leucine (anticodon UAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
LOW QUALITY PROTEIN: flocculation protein FLO11-like
rac GTPase-activating protein 1-like, transcript variant X2
rac GTPase-activating protein 1-like, transcript variant X1
rac GTPase-activating protein 1-like, transcript variant X3
rac GTPase-activating protein 1-like isoform X1
rac GTPase-activating protein 1-like isoform X3
rac GTPase-activating protein 1-like isoform X2
single-strand selective monofunctional uracil DNA glycosylase-like, transcript variant X2
tRNA-specific adenosine deaminase 2-like
single-strand selective monofunctional uracil DNA glycosylase-like, transcript variant X1
single-strand selective monofunctional uracil DNA glycosylase-like isoform X1
single-strand selective monofunctional uracil DNA glycosylase-like isoform X2
dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase-like
mevalonate kinase-like, transcript variant X2
mevalonate kinase-like, transcript variant X1
glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial-like, transcript variant X2
transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial-like, transcript variant X1
glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial-like, transcript variant X3
glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial-like
uncharacterized LOC123513279, transcript variant X2
uncharacterized LOC123513279, transcript variant X1
uncharacterized LOC123513279, transcript variant X3
F-box/WD repeat-containing protein 5-like
E3 ubiquitin-protein ligase PPP1R11-like
beta-glucuronidase-like, transcript variant X5
beta-glucuronidase-like, transcript variant X2
beta-glucuronidase-like, transcript variant X1
beta-glucuronidase-like, transcript variant X4
beta-glucuronidase-like, transcript variant X3
endocuticle structural glycoprotein SgAbd-2-like
endocuticle structural glycoprotein SgAbd-2-like, transcript variant X3
endocuticle structural glycoprotein SgAbd-2-like, transcript variant X1
endocuticle structural glycoprotein SgAbd-2-like isoform X1
endocuticle structural glycoprotein SgAbd-2-like isoform X3
endocuticle structural glycoprotein SgAbd-2-like, transcript variant X2
endocuticle structural glycoprotein SgAbd-2-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized protein LOC123515870 isoform X2
LOW QUALITY PROTEIN: cytochrome P450 3A31-like
vascular endothelial growth factor receptor 1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
vascular endothelial growth factor receptor 1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
vascular endothelial growth factor receptor 1-like isoform X2
vascular endothelial growth factor receptor 1-like, transcript variant X1
mast/stem cell growth factor receptor Kit-like isoform X1
vascular endothelial growth factor receptor 1-like isoform X3
ralBP1-associated Eps domain-containing protein 2-like, transcript variant X1
ralBP1-associated Eps domain-containing protein 2-like, transcript variant X2
ralBP1-associated Eps domain-containing protein 2-like, transcript variant X3
ralBP1-associated Eps domain-containing protein 2-like, transcript variant X4
ralBP1-associated Eps domain-containing protein 2-like isoform X1
ralBP1-associated Eps domain-containing protein 2-like isoform X2
ralBP1-associated Eps domain-containing protein 2-like isoform X3
ralBP1-associated Eps domain-containing protein 2-like isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized protein DDB_G0290587-like
uncharacterized LOC123514495, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
uncharacterized LOC123514495, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
uncharacterized LOC123514495, transcript variant X1
uncharacterized LOC123514515, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized LOC123514515, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
uncharacterized LOC123514510, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
uncharacterized LOC123514510, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
low-density lipoprotein receptor-related protein 2-like, transcript variant X1
low-density lipoprotein receptor-related protein 2-like, transcript variant X2
low-density lipoprotein receptor-related protein 2-like, transcript variant X3
low-density lipoprotein receptor-related protein 2-like
uncharacterized LOC123514415, transcript variant X2
uncharacterized LOC123514415, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
bromodomain-containing protein DDB_G0270170-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: bromodomain-containing protein DDB_G0270170-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
mitotic-spindle organizing protein 1-like, transcript variant X1
mitotic-spindle organizing protein 1-like, transcript variant X2
mitotic-spindle organizing protein 1-like
glutamic acid-rich protein-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
glutamic acid-rich protein-like, transcript variant X1
glutamic acid-rich protein-like isoform X2
glutamic acid-rich protein-like isoform X1
uncharacterized LOC123513474, transcript variant X1
uncharacterized LOC123513474, transcript variant X2
uncharacterized protein LOC123513474 isoform X1
uncharacterized protein LOC123513474 isoform X2
cilia- and flagella-associated protein 251-like
uncharacterized protein CG3556-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
uncharacterized protein CG3556-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
LOW QUALITY PROTEIN: protein dachsous-like
LOW QUALITY PROTEIN: protein IWS1 homolog
uncharacterized LOC123515131, transcript variant X1
uncharacterized LOC123515131, transcript variant X2
transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
MKRN2 opposite strand protein-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
MKRN2 opposite strand protein-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
growth/differentiation factor 8-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
growth/differentiation factor 8-like, transcript variant X1
growth/differentiation factor 8-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
growth/differentiation factor 8-like, transcript variant X2
growth/differentiation factor 8-like, transcript variant X5
growth/differentiation factor 8-like isoform X3
growth/differentiation factor 8-like isoform X2
acyl-CoA-binding domain-containing protein 5-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
acyl-CoA-binding domain-containing protein 5-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
acyl-CoA-binding domain-containing protein 5-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
acyl-CoA-binding domain-containing protein 5-like isoform X2
acyl-CoA-binding domain-containing protein 5-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
4-trimethylaminobutyraldehyde dehydrogenase A-like
LOW QUALITY PROTEIN: 4-trimethylaminobutyraldehyde dehydrogenase A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
integrin alpha pat-2-like, transcript variant X1
integrin alpha pat-2-like, transcript variant X3
integrin alpha pat-2-like, transcript variant X2
integrin alpha-6-like, transcript variant X2
integrin alpha-6-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transfer RNA isoleucine (anticodon UAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
probable E3 ubiquitin-protein ligase HECTD2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HECTD2
heparan sulfate 2-O-sulfotransferase 1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
LOW QUALITY PROTEIN: heparan sulfate 2-O-sulfotransferase 1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 28 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
LOW QUALITY PROTEIN: uncharacterized protein YJR142W-like
PHAF1 protein CG7083-like, transcript variant X1
PHAF1 protein CG7083-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
uncharacterized LOC123515399, transcript variant X1
uncharacterized LOC123515399, transcript variant X3
uncharacterized LOC123515399, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC123515471
centromere protein I-like, transcript variant X2
centromere protein I-like, transcript variant X1
centromere protein I-like, transcript variant X3
LOW QUALITY PROTEIN: protein KTI12 homolog
tropomyosin-1, isoforms 9A/A/B isoform X30
tropomyosin-1, isoforms 9A/A/B isoform X33
tropomyosin-1, isoforms 9A/A/B isoform X32
tropomyosin-1, isoforms 9A/A/B isoform X29
tropomyosin-1, isoforms 9A/A/B isoform X31
tRNA-splicing endonuclease subunit Sen2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
feline leukemia virus subgroup C receptor-related protein 1-like, transcript variant X1
feline leukemia virus subgroup C receptor-related protein 1-like, transcript variant X2
feline leukemia virus subgroup C receptor-related protein 1-like, transcript variant X3
feline leukemia virus subgroup C receptor-related protein 1-like isoform X1
feline leukemia virus subgroup C receptor-related protein 1-like isoform X2
E3 SUMO-protein ligase RanBP2-like, transcript variant X5
E3 SUMO-protein ligase RanBP2-like, transcript variant X3
E3 SUMO-protein ligase RanBP2-like, transcript variant X4
E3 SUMO-protein ligase RanBP2-like, transcript variant X1
nuclear pore complex protein Nup153-like isoform X5
E3 SUMO-protein ligase RanBP2-like isoform X3
uncharacterized protein LOC123515650 isoform X4
E3 SUMO-protein ligase RanBP2-like isoform X1
E3 SUMO-protein ligase RanBP2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
E3 SUMO-protein ligase RanBP2-like isoform X2
LOW QUALITY PROTEIN: elongation factor 1-gamma-like
serine/threonine-protein kinase Warts-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
ubiquitin carboxyl-terminal hydrolase 25-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
ubiquitin carboxyl-terminal hydrolase 25-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
ubiquitin carboxyl-terminal hydrolase 25-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
ubiquitin carboxyl-terminal hydrolase 25-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
ubiquitin carboxyl-terminal hydrolase 25-like
eukaryotic translation initiation factor 2-alpha kinase 3-like
LOW QUALITY PROTEIN: transmembrane protein 68-like
kinetochore protein Spc25-like, transcript variant X4
kinetochore protein Spc25-like, transcript variant X3
kinetochore protein Spc25-like, transcript variant X2
kinetochore protein Spc25-like, transcript variant X1
kinetochore protein Spc25-like isoform X2
kinetochore protein Spc25-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon
transfer RNA valine (anticodon GAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
peptidyl-prolyl cis-trans isomerase D-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 52 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase D-like
prostaglandin E2 receptor EP4 subtype-like
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: prostaglandin E2 receptor EP4 subtype-like
uncharacterized LOC123515707, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC123515707, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
uncharacterized protein LOC123515707 isoform X1
uncharacterized protein LOC123515707 isoform X2
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SHPRH-like
ribosomal RNA-processing protein 7 homolog A-like
uncharacterized LOC123514571, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
uncharacterized LOC123514571, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
UPF0676 protein C1494.01-like, transcript variant X1
UPF0676 protein C1494.01-like, transcript variant X2
UPF0676 protein C1494.01-like isoform X1
UPF0676 protein C1494.01-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
putative uncharacterized protein DDB_G0286901
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
integrator complex subunit 5-like protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments
GATA zinc finger domain-containing protein 8-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
probable basic-leucine zipper transcription factor C, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
probable basic-leucine zipper transcription factor C, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
probable basic-leucine zipper transcription factor C
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
LOW QUALITY PROTEIN: uncharacterized protein LOC123513836
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 3 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
transmembrane and ubiquitin-like domain-containing protein 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
LOW QUALITY PROTEIN: transmembrane and ubiquitin-like domain-containing protein 1
TAR DNA-binding protein 43-like, transcript variant X1
TAR DNA-binding protein 43-like, transcript variant X3
TAR DNA-binding protein 43-like, transcript variant X2
TAR DNA-binding protein 43-like, transcript variant X4
TAR DNA-binding protein 43-like isoform X1
TAR DNA-binding protein 43-like isoform X3
TAR DNA-binding protein 43-like isoform X2
TAR DNA-binding protein 43-like isoform X4
brefeldin A-inhibited guanine nucleotide-exchange protein 3-like
LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 3-like
eukaryotic translation initiation factor 3 subunit L-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 25 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit L-like
uncharacterized LOC123514719, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, 5 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
uncharacterized LOC123514719, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized protein LOC123514719 isoform X1
uncharacterized protein LOC123514719 isoform X2
beta-1,4-glucuronyltransferase 1-like, transcript variant X2
beta-1,4-glucuronyltransferase 1-like, transcript variant X1
beta-1,4-glucuronyltransferase 1-like isoform X1
beta-1,4-glucuronyltransferase 1-like isoform X2
probable peroxisomal acyl-coenzyme A oxidase 1
LOW QUALITY PROTEIN: probable peroxisomal acyl-coenzyme A oxidase 1
uncharacterized LOC123514551, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
uncharacterized LOC123514551, transcript variant X2
uncharacterized protein LOC123514551 isoform X1
uncharacterized protein LOC123514551 isoform X2
LOW QUALITY PROTEIN: cytochrome P450 4c3-like
hexokinase-2-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
hexokinase-2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
hexokinase-2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
tigger transposable element-derived protein 1-like
LOW QUALITY PROTEIN: abnormal cell migration protein 10-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 59% coverage of the annotated genomic feature by RNAseq alignments
sodium- and chloride-dependent glycine transporter 2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
sodium- and chloride-dependent glycine transporter 2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
sodium- and chloride-dependent glycine transporter 2-like, transcript variant X3
sodium- and chloride-dependent glycine transporter 1-like isoform X1
sodium- and chloride-dependent glycine transporter 2-like isoform X2
28S ribosomal protein S30, mitochondrial-like
LOW QUALITY PROTEIN: 28S ribosomal protein S30, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
LOW QUALITY PROTEIN: uncharacterized protein LOC123516218
protein kinase shaggy-like, transcript variant X1
protein kinase shaggy-like, transcript variant X2
protein kinase shaggy-like, transcript variant X3
protein kinase shaggy-like, transcript variant X4
protein kinase shaggy-like, transcript variant X6
protein kinase shaggy-like, transcript variant X8
glycogen synthase kinase-3 beta-like isoform X1
glycogen synthase kinase-3 beta-like isoform X6
glycogen synthase kinase-3 beta-like isoform X2
glycogen synthase kinase-3 beta-like isoform X3
glycogen synthase kinase-3 beta-like isoform X4
protein kinase shaggy-like, transcript variant X5
glycogen synthase kinase-3 beta-like isoform X5
protein kinase shaggy-like, transcript variant X7
protein kinase shaggy-like, transcript variant X9
glycogen synthase kinase-3 beta-like isoform X7
glycogen synthase kinase-3 beta-like isoform X9