Portunus trituberculatus mitochondrion, complete genome.
type: Entry
definition: Portunus trituberculatus mitochondrion, complete genome.
sequence version: NC_005037.1
sequence date: 2023-04-03
sequence: sequence
division: INV
label: NC_005037.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Portunus trituberculatus (swimming crab)
organism: Portunus trituberculatus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Brachyura; Eubrachyura; Portunoidea; Portunidae; Portuninae; Portunus.
reference: 1
references: 12853147
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence was derived from AB093006.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16026
topology: circular
so has quality: SO_0000988
location: 1..16026
location: region:1-16026:1
RO_0002162: 210409

NC_005037
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Complete mitochondrial DNA sequence of the swimming crab, Portunus trituberculatus (Crustacea: Decapoda: Brachyura)
author: Yamauchi, M.M.
author: Miya, M.U.
author: Nishida, M.
journal: Gene 311, 129-135 (2003)
pubmed: 12853147

12853147
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (15-JUL-2003) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Yamauchi, M.M.
author: Miya, M.U.
author: Nishida, M.
journal: Submitted (07-OCT-2002) Ocean Research Institute, Univ. of Tokyo, Department of Marine Bioscience; 1-15-1 Minamidai, Nakano-ku, Tokyo 164-8639, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16026:1
position: 16026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16026:1:source
so part of: sequence
organism: Portunus trituberculatus
organelle: mitochondrion
mol type: genomic DNA

210409
type: Taxonomy
SIO_000068: taxonomy

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 210409
gene: COX1
so part of: sequence
location: 1..1534
location: region:1-1534:1
so has part: feature:1-1534:1:exon
subclass of: SO_0000010

1482824
type: Gene
SIO_000068: ncbigene

position:1534:1
position: 1534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1534:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 210409
gene: COX1
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:1534,aa:TERM)
transl table: 5
product: cytochrome c oxidase subunit I
translation: MQRWFFSTNHKDIGTLYFIFGAWSGMVGTSLSLIIRAELGQPGTLIGNDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLLMSGMVESGVGTGWTVYPPLSAAIAHAGASVDLGIFSLHLAGVSSILGAVNFMTTVINMRSFGMSMDQMPLFVWSVFITAILLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPVLYQHLFWFFGHPEVYILILPAFGMISHIVSQESGKKESFGTLGMIYAMMAIGILGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLSTLHGTQINYSPSMLWALGFIFLFTVGGLTGVVLANSSIDIILHDTYYVVAHFHYVLSMGAVFGIFAGIAHWFPLFTGMSLNPKWMKIHFTIMFIGVNVTFFPQHFLGLNGMPRRYSDYPDAYTTWNIVSSMGSMVSLIAMLIFMIVIWEALISSRPVMFSPYLPSSIEWNHSYPPADHSYMEIPLITN
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 1..1534
location: region:1-1534:1
so has part: feature:1-1534:1:exon

NP_872442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1534:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Leu
codon recognized: UUR
so part of: sequence
location: 1535..1599
location: region:1535-1599:1
so has part: feature:1535-1599:1:region

position:1535:1
position: 1535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1599:1
position: 1599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1535-1599:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 210409
gene: COX2
so part of: sequence
location: 1627..2311
location: region:1627-2311:1
so has part: feature:1627-2311:1:exon
subclass of: SO_0000010

1482825
type: Gene
SIO_000068: ncbigene

position:1627:1
position: 1627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2311:1
position: 2311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1627-2311:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 210409
gene: COX2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:2311,aa:TERM)
transl table: 5
product: cytochrome c oxidase subunit II
translation: MATWTYLGFQDSASPLMEQLIFFHDHIMVVLIMIITFVGYMMASILTNSFINRYMLEHQTIELIWTALPAVILVFIALPSLRLLYLLDEVNNPSVTLKTVGHQWYWSYEYSDFLDAEFDSYMTPTNELESSGFRLLDVDNRTVLPMNTQIRVVITAADVIHSWTVPALGVKADAIPGRLNQSSFMMSRPGLFYGQCSEICGANHSFMPIVVESVNTNSFLNWISSYSD
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 1627..2311
location: region:1627-2311:1
so has part: feature:1627-2311:1:exon

NP_872443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1627-2311:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Lys
so part of: sequence
location: 2312..2379
location: region:2312-2379:1
so has part: feature:2312-2379:1:region

position:2312:1
position: 2312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2379:1
position: 2379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2312-2379:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Asp
so part of: sequence
location: 2380..2445
location: region:2380-2445:1
so has part: feature:2380-2445:1:region

position:2380:1
position: 2380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2445:1
position: 2445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2380-2445:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 210409
gene: ATP8
so part of: sequence
location: 2446..2607
location: region:2446-2607:1
so has part: feature:2446-2607:1:exon
subclass of: SO_0000010

1482823
type: Gene
SIO_000068: ncbigene

position:2446:1
position: 2446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2607:1
position: 2607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2446-2607:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 210409
gene: ATP8
codon start: 1
transl table: 5
product: ATP synthase F0 subunit 8
translation: MPQMAPLLWLYLYIFFLLSFIIFLMINYFIKPFETIDSNIISKSSTHFFNWKL
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 2446..2607
location: region:2446-2607:1
so has part: feature:2446-2607:1:exon

NP_872444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2446-2607:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 210409
gene: ATP6
so part of: sequence
location: 2601..3278
location: region:2601-3278:1
so has part: feature:2601-3278:1:exon
subclass of: SO_0000010

1482822
type: Gene
SIO_000068: ncbigene

position:2601:1
position: 2601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3278:1
position: 3278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2601-3278:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 210409
gene: ATP6
codon start: 1
transl table: 5
product: ATP synthase F0 subunit 6
translation: MMANLFSIFEPSSSIFNFSLNWLSTLLGLLFLPYLYWASPSRWSLCWSDMMFTLHKEFKALLTVSCVGSTMFFVSLFSLILYNNFLGLLPYVFTSSSHMVMTLALSLPLWVTLMVKGWINHTQHMFAHLVPQGTPPVLMPFMVLIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPTMTSSIVLSILIFSQILLLTLESAVAIIQSYVFAVLSTLYTSEIN
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 2601..3278
location: region:2601-3278:1
so has part: feature:2601-3278:1:exon

NP_872445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2601-3278:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 210409
gene: COX3
so part of: sequence
location: 3278..4069
location: region:3278-4069:1
so has part: feature:3278-4069:1:exon
subclass of: SO_0000010

1482826
type: Gene
SIO_000068: ncbigene

position:4069:1
position: 4069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3278-4069:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 210409
gene: COX3
codon start: 1
transl table: 5
product: cytochrome c oxidase subunit III
translation: MTSSHGFHPYHLVDMSPWPLTGSISAMMLTTGLIKWFHQYNMNLLILSIFAILLTMYQWWRDITREGTFQGLHTSVVIKGLRWGMILFIASEVLFFFSFFWAFFHSSLAPTIEIGMNWPPYGIQPFNPFQIPLLNTTILLSSGATVTWAHHAIMEANHTQAIQSLGLTILLGFYFTLLQAFEYIEAPFTIADSVFGSTFFVATGFHGLHVIIGTSFLLICFLRMFFCHFSSNHHVGFEAAAWYWHFVDVVWLFLYVFIYWWGG
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 3278..4069
location: region:3278-4069:1
so has part: feature:3278-4069:1:exon

NP_872446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3278-4069:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Gly
so part of: sequence
location: 4069..4133
location: region:4069-4133:1
so has part: feature:4069-4133:1:region

position:4133:1
position: 4133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4069-4133:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 210409
gene: ND3
so part of: sequence
location: 4134..4487
location: region:4134-4487:1
so has part: feature:4134-4487:1:exon
subclass of: SO_0000010

1482830
type: Gene
SIO_000068: ncbigene

position:4134:1
position: 4134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4487:1
position: 4487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4134-4487:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 210409
gene: ND3
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 3
translation: MFTLTLFSLLTIIVCYIVMTLASVISKKTITDREKNSPYECGFDPKGSARFPFSLRFFLIAVIFLIFDVEITLLLPLASIFNVTNLFSWLSTGTLFLLILLIGLYYEWAQGALEWSK
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 4134..4487
location: region:4134-4487:1
so has part: feature:4134-4487:1:exon

NP_872447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4134-4487:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Ala
so part of: sequence
location: 4496..4559
location: region:4496-4559:1
so has part: feature:4496-4559:1:region

position:4496:1
position: 4496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4559:1
position: 4559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4496-4559:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Arg
so part of: sequence
location: 4565..4629
location: region:4565-4629:1
so has part: feature:4565-4629:1:region

position:4565:1
position: 4565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4629:1
position: 4629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4565-4629:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Asn
so part of: sequence
location: 4630..4695
location: region:4630-4695:1
so has part: feature:4630-4695:1:region

position:4630:1
position: 4630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4695:1
position: 4695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4630-4695:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Ser
codon recognized: AGN
so part of: sequence
location: 4698..4764
location: region:4698-4764:1
so has part: feature:4698-4764:1:region

position:4698:1
position: 4698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4764:1
position: 4764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4698-4764:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Glu
so part of: sequence
location: 4765..4832
location: region:4765-4832:1
so has part: feature:4765-4832:1:region

position:4765:1
position: 4765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4832:1
position: 4832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4765-4832:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-His
so part of: sequence
location: complement(4852..4916)
location: region:4852-4916:-1
so has part: feature:4852-4916:-1:region

position:4852:-1
position: 4852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4916:-1
position: 4916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4852-4916:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Phe
so part of: sequence
location: complement(4919..4982)
location: region:4919-4982:-1
so has part: feature:4919-4982:-1:region

position:4919:-1
position: 4919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4982:-1
position: 4982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4919-4982:-1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 210409
gene: ND5
so part of: sequence
location: complement(4982..6709)
location: region:4982-6709:-1
so has part: feature:4982-6709:-1:exon
subclass of: SO_0000010

1482833
type: Gene
SIO_000068: ncbigene

position:6709:-1
position: 6709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4982-6709:-1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 210409
gene: ND5
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 5
translation: MIWKISMHEISMLTLVSGSVLCGIAGIKKVSTGVMDVIEWELFNLVSSSIVFTVILDWVSLLFMSFVFLISGSVLFYSGSYMAEDKTSNRFMYLVLAFVLSMSLMVLSPNLISILLGWDGLGLVSYALVIYYSNEKSANAGMLTILSNRVGDVAILLSIGLMSSLGSWNFFFYSYYLNEEWVLLKVFLMISAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFSAALEGSLVQSWLLIISCLTMFMAGLGANFEYDLKKIIALSTLSQLGVMLSILSLGYADLAFFHLLSHALFKALLFMCAGVVIHSVGGYQDIRFMGNLVKFMPLTVSYMTISNLALCGFPFMAGFYSKDMILEVAFMSSINFIALMLYIMATGLTVMYTMRLIFYSISGEYNLGSINNLSDEDYMMTNSMSGLGLGAILGGACLGWMLFPECYMICLSFIMKMMVIMVSVLGGLIGYTLNMMSVNFTLKSLSNYSLIVFMGSMWFMPALSTLKLSEKSLSSGSYVEKVLDKGWFEFYGGQGLNYMFSNLFYMLNSMHLNSVKIFLKVAVITMIVFMVAVL
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: complement(4982..6709)
location: region:4982-6709:-1
so has part: feature:4982-6709:-1:exon

NP_872448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4982-6709:-1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 210409
gene: ND4
so part of: sequence
location: complement(6731..8065)
location: region:6731-8065:-1
so has part: feature:6731-8065:-1:exon
subclass of: SO_0000010

1482831
type: Gene
SIO_000068: ncbigene

position:6731:-1
position: 6731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8065:-1
position: 8065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6731-8065:-1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 210409
gene: ND4
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 4
translation: MLKFMIPLVVLIKYSKEWKIVQVGMFFVSFILSLHCYHNFYLFSVGFNLGMDYISYIMIMLSFWVVSLILISSQKVKKLDNFNSMFIMVNIMLLVFLVLTFSSMDYLMFYISFEASLIPTLILILGWGYQPERIQAGIYMLFYTLAFSLPLLVSLLVYYSVSGSLIINLSSSLSGMGYVSKLWYISTVLAFMVKLPMFMFHLWLPKAHVEAPIAGSMILAGVLLKLGGYGLIRVLIMFQENNKEFCWLWVSVSIMGGVYISLVCMRQVDMKSLIAYSSVVHMSLVLCGIVIFSWWGLAGCMILMVGHGLCSSGLFCLANMVYERTGSRSLMVNKGLLTFMPSMGLWWFLLSVSNMASPPSLNLMGEIMLILTMLSWSKLTIFGISLLSFFSASYTLYMYSLSQHGVFYNSLYSCCSGKVNEYLSLFLHWLPLNIMILNSTLVMI
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: complement(6731..8065)
location: region:6731-8065:-1
so has part: feature:6731-8065:-1:exon

NP_872449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6731-8065:-1:exon

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 210409
gene: ND4L
so part of: sequence
location: complement(8059..8361)
location: region:8059-8361:-1
so has part: feature:8059-8361:-1:exon
subclass of: SO_0000010

1482832
type: Gene
SIO_000068: ncbigene

position:8059:-1
position: 8059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8361:-1
position: 8361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8059-8361:-1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 210409
gene: ND4L
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 4L
translation: MVNFSSAMIFVPMVMIFCGAWGFIAYSKHMLNSLLSLEFMMLGVFWLMSSQLALVASEVYFSLFFLTLAACEGALGLTMLILVVRSHGNDMFSSFNLLEC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: complement(8059..8361)
location: region:8059-8361:-1
so has part: feature:8059-8361:-1:exon

NP_872450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8059-8361:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Thr
so part of: sequence
location: 8364..8427
location: region:8364-8427:1
so has part: feature:8364-8427:1:region

position:8364:1
position: 8364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8427:1
position: 8427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8364-8427:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Pro
so part of: sequence
location: complement(8428..8495)
location: region:8428-8495:-1
so has part: feature:8428-8495:-1:region

position:8428:-1
position: 8428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8495:-1
position: 8495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8428-8495:-1:region

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 210409
gene: ND6
so part of: sequence
location: 8498..9004
location: region:8498-9004:1
so has part: feature:8498-9004:1:exon
subclass of: SO_0000010

1482834
type: Gene
SIO_000068: ncbigene

position:8498:1
position: 8498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9004:1
position: 9004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8498-9004:1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 210409
gene: ND6
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 6
translation: MTLLFIPFILLLSILFTRLSHPLSMGLTLLIQTIFISLTAGLSTYSYWFSYILFMIFLGGMLVLFIYVTSLASNEPFFFSWSALSFSLILLFMLLTLTFFWDSLMGPTMTQLPLSSFSLNSSNIFIISWIYSSNLMNFTLYIILYLLLTLVVVVKITNLFKGPFRLSP
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: 8498..9004
location: region:8498-9004:1
so has part: feature:8498-9004:1:exon

NP_872451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8498-9004:1:exon

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 210409
gene: CYTB
so part of: sequence
location: 9004..10138
location: region:9004-10138:1
so has part: feature:9004-10138:1:exon
subclass of: SO_0000010

1482827
type: Gene
SIO_000068: ncbigene

position:10138:1
position: 10138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9004-10138:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 210409
gene: CYTB
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:10138,aa:TERM)
transl table: 5
product: cytochrome b
translation: MTTPMRKSHPLFKIINNSLVDMPLPSNISTFWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTMHANGASFFFICIYIHIGRGIYYGSYMTFHAWMVGVVILFMVMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGTDLVQWIWGGFSVDNATLTRFFTFHFVLPFIIAAMTIIHIFFLHQSGANNPLGVSSQMDKVPFHPYFTFKDIVGFIVMFTLLLILSLLNPYLLGDPDNFISANPLVTPAHIQPEWYFLFAYAILRSIPNKLGGVIALVASVAIIMILPFTHTSNFRSLTFYPLNQFMFWTLVSVLVLLTWIGARPVEEPYVLTGQILTVTYFLLFIINPLLLMGWDKMLK
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 9004..10138
location: region:9004-10138:1
so has part: feature:9004-10138:1:exon

NP_872452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9004-10138:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Ser
codon recognized: UCN
so part of: sequence
location: 10139..10205
location: region:10139-10205:1
so has part: feature:10139-10205:1:region

position:10139:1
position: 10139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10205:1
position: 10205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10139-10205:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 210409
gene: ND1
so part of: sequence
location: complement(10240..11196)
location: region:10240-11196:-1
so has part: feature:10240-11196:-1:exon
subclass of: SO_0000010

1482828
type: Gene
SIO_000068: ncbigene

position:10240:-1
position: 10240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11196:-1
position: 11196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10240-11196:-1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 210409
gene: ND1
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 1
translation: MLSNCFMLLVEIVNYLVLMICVLVGVAFVTLLERKILGYIQIRKGPNKVGYMGLLQPFSDAVKLFTKEQTMPIMSNFVVYYLCPVLSLFLSLLVWSVMPYDVGLVSFNMSILFFFCCLGMGVYSVMVAGWASNCKYSLLGSLRSVAQTISYEVSLALILLSFIMLLGGFSLELFVKYQCYSWFMFMSLPLSMVWFASCLAETNRTPFDFAEGESELVSGFNTEYSSGGFALIFMAEYSSILFMSVLFVIVFLGSSPCSISFYLKSMLVAFIFVWVRGTLPRLRYDKLMYLAWKSFLPVSINYLILFMGVKSLCFVLNL
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: complement(10240..11196)
location: region:10240-11196:-1
so has part: feature:10240-11196:-1:exon

NP_872453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10240-11196:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: complement(11202..11270)
location: region:11202-11270:-1
so has part: feature:11202-11270:-1:region

position:11202:-1
position: 11202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11270:-1
position: 11270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11202-11270:-1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 210409
product: l-rRNA
so part of: sequence
location: complement(11271..12602)
location: region:11271-12602:-1
so has part: feature:11271-12602:-1:region

position:11271:-1
position: 11271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12602:-1
position: 12602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11271-12602:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Val
so part of: sequence
location: complement(12603..12675)
location: region:12603-12675:-1
so has part: feature:12603-12675:-1:region

position:12603:-1
position: 12603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12675:-1
position: 12675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12603-12675:-1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 210409
product: s-rRNA
so part of: sequence
location: complement(12676..13515)
location: region:12676-13515:-1
so has part: feature:12676-13515:-1:region

position:12676:-1
position: 12676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13515:-1
position: 13515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12676-13515:-1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 210409
note: putative control region
so part of: sequence
location: 13516..14619
location: region:13516-14619:1
so has part: feature:13516-14619:1:region

position:13516:1
position: 13516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14619:1
position: 14619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13516-14619:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Ile
so part of: sequence
location: 14620..14686
location: region:14620-14686:1
so has part: feature:14620-14686:1:region

position:14620:1
position: 14620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14686:1
position: 14686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14620-14686:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Gln
so part of: sequence
location: complement(14684..14752)
location: region:14684-14752:-1
so has part: feature:14684-14752:-1:region

position:14684:-1
position: 14684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14752:-1
position: 14752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14684-14752:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Met
so part of: sequence
location: 14754..14822
location: region:14754-14822:1
so has part: feature:14754-14822:1:region

position:14754:1
position: 14754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14822:1
position: 14822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14754-14822:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 210409
gene: ND2
so part of: sequence
location: 14823..15828
location: region:14823-15828:1
so has part: feature:14823-15828:1:exon
subclass of: SO_0000010

1482829
type: Gene
SIO_000068: ncbigene

position:14823:1
position: 14823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15828:1
position: 15828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14823-15828:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 210409
gene: ND2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:15828,aa:TERM)
transl table: 5
product: NADH dehydrogenase subunit 2
translation: MTFPISYLFFFLTLLSGTTLSVSSTSWFGAWLGLELNLLSFIPLITTKLCPYLTEAAIKYFLIQALASTILIMSASIFLYAQSISHVMILLSLLLKLGAAPFHFWFPQVTEGLSWPQAFILLTIQKLAPMFLISYLTFSDTLMSIIMFSALLSSLVGALGGLNMMKLRKLMAFSSINHMAWMLVGIYLGDIYWLIYFTFYSFVSGSVIMLLYSTHSFTVSNLLNQSSKSLLLNMFIPMNILSLGGLPPFLGFAPKWIMIQFLSANSMFIPLLVLLTSSLITLYFYLRLFIPLSLLSFSFFISNVKLTSLFSSSYTLLSMSFINIFGILFPIPFMI
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 14823..15828
location: region:14823-15828:1
so has part: feature:14823-15828:1:exon

NP_872454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14823-15828:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Trp
so part of: sequence
location: 15829..15896
location: region:15829-15896:1
so has part: feature:15829-15896:1:region

position:15829:1
position: 15829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15896:1
position: 15896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15829-15896:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Cys
so part of: sequence
location: complement(15896..15960)
location: region:15896-15960:-1
so has part: feature:15896-15960:-1:region

position:15896:-1
position: 15896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15960:-1
position: 15960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15896-15960:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 210409
product: tRNA-Tyr
so part of: sequence
location: complement(15961..16026)
location: region:15961-16026:-1
so has part: feature:15961-16026:-1:region

position:15961:-1
position: 15961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16026:-1
position: 16026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15961-16026:-1:region