Mycetocola zhujimingii strain CGMCC 1.16372 plasmid unnamed, complete sequence.
Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae; Mycetocola.
Submitted (31-JAN-2018) National Institue for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping District Chang Chang Road, No. 155, Beijing, Beijing 102206, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP026950.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SOAPdenovo v. 2\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 08:13:24\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,062\nCDSs (total) :: 3,003\nGenes (coding) :: 2,987\nCDSs (with protein) :: 2,987\nGenes (RNA) :: 59\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 3\nPseudo Genes (total) :: 16\nCDSs (without protein) :: 16\nPseudo Genes (ambiguous residues) :: 0 of 16\nPseudo Genes (frameshifted) :: 4 of 16\nPseudo Genes (incomplete) :: 12 of 16\nPseudo Genes (internal stop) :: 0 of 16\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_015491278.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013603147.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
TraM recognition domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009358113.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_005053876.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: protein motif:HMM:NF017524.2
plasmid mobilization relaxosome protein MobC
COORDINATES: similar to AA sequence:RefSeq:WP_008598614.1
COORDINATES: similar to AA sequence:RefSeq:WP_011776888.1
COORDINATES: protein motif:HMM:NF012651.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015772024.1
GO:0097573 - glutathione oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF024359.2
COORDINATES: protein motif:HMM:NF014533.2
COORDINATES: similar to AA sequence:RefSeq:WP_019311245.1
ArdC-like ssDNA-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF024139.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF012708.2
COORDINATES: similar to AA sequence:RefSeq:WP_013347394.1
COORDINATES: similar to AA sequence:RefSeq:WP_014691781.1
COORDINATES: similar to AA sequence:RefSeq:WP_008480858.1
COORDINATES: similar to AA sequence:RefSeq:WP_017558028.1
COORDINATES: similar to AA sequence:RefSeq:WP_012299939.1
COORDINATES: similar to AA sequence:RefSeq:WP_012039405.1