Paracoccus jeotgali strain CBA4604 plasmid pCBA4604-02, complete sequence.
type: Entry
definition: Paracoccus jeotgali strain CBA4604 plasmid pCBA4604-02, complete sequence.
sequence version: NZ_CP025585.1
sequence date: 2022-10-26
sequence: sequence
division: CON
label: NZ_CP025585.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN08211554
keyword: RefSeq
source: Paracoccus jeotgali
organism: Paracoccus jeotgali
taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP025585.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: RS HGAP Assembly v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 146.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/26/2022 04:14:26\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,224\nCDSs (total) :: 3,168\nGenes (coding) :: 3,081\nCDSs (with protein) :: 3,081\nGenes (RNA) :: 56\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 3\nPseudo Genes (total) :: 87\nCDSs (without protein) :: 87\nPseudo Genes (ambiguous residues) :: 0 of 87\nPseudo Genes (frameshifted) :: 54 of 87\nPseudo Genes (incomplete) :: 38 of 87\nPseudo Genes (internal stop) :: 14 of 87\nPseudo Genes (multiple problems) :: 16 of 87\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 28805
topology: circular
so has quality: SO_0000988
location: 1..28805
location: region:1-28805:1
RO_0002162: 2065379

NZ_CP025585
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN08211554
type: BioSample
SIO_000068: biosample

1
title: Genomic analysis of Paracoccus sp. CBA4604
author: Roh, S.W.
author: Kim, J.Y.
author: Kim, J.S.
journal: Unpublished

2
title: Direct Submission
author: Roh, S.W.
author: Kim, J.Y.
author: Kim, J.S.
journal: Submitted (20-DEC-2017) Microbiology and Functionality Research Group, World Institute of Kimchi, 86, Kimchi-ro, Nam-gu, Gwangju, Gwangju 61755, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28805:1
position: 28805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-28805:1:source
so part of: sequence
organism: Paracoccus jeotgali
mol type: genomic DNA
strain: CBA4604
type material: type material of Paracoccus jeotgali
plasmid: pCBA4604-02
country: South Korea: Yeosu
collection date: 2016-08-16

2065379
type: Taxonomy
SIO_000068: taxonomy

CYR75_RS16140
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS16140
so part of: sequence
location: complement(213..971)
location: region:213-971:-1
so has part: feature:213-971:-1:exon
subclass of: SO_0000010

position:213:-1
position: 213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971:-1
position: 971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213-971:-1:exon

CYR75_RS16140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS16140
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVEEMLGGIEENGKRIIIGLGSGRCGTMSLAKLINAQTNSVCFHELNPSGMSWCGAEYTVLSLLRDFTAIIEGEERAITADLVSPDRLSIMPRLLELQNVDVLGDVASYYLPYVELVISRAPAARFPCMRRDKKETIDSFVNKLSELPNEKPRNPWACLEDRRWRHDPIWDRCFPKTSKVNGEDLAEYIGEYYDEYYREAEIVEREHRENFRIFDTNDLNSNEGRSEILNFCLPDADHKNFHVHKNKRKSH
SIO_010081: CYR75_RS16140
subclass of: SO_0000673
so part of: CYR75_RS16140
location: complement(213..971)
location: region:213-971:-1
so has part: feature:213-971:-1:exon

WP_158644705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213-971:-1:exon

CYR75_RS15735
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15735
old locus tag: CYR75_15730
so part of: sequence
location: complement(1025..2053)
location: region:1025-2053:-1
so has part: feature:1025-2053:-1:exon
subclass of: SO_0000010

position:1025:-1
position: 1025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2053:-1
position: 2053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025-2053:-1:exon

CYR75_RS15735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15735
old locus tag: CYR75_15730
inference: COORDINATES: protein motif:HMM:TIGR03026.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide sugar dehydrogenase
translation: MAEKHSRKLGNNLDLSATLDPEQAYPGAEYVVVSTPTNYDPRSNRFDTSTVERVLTDIHRINPDAVAIIKSTIPVGFVDRMREELDWPNIIFSPEFLREGQALHDNLHPSRIVVGERSERGRRFADLLVQGAIRKDMPVRFCGSVEAEAIKLFSNTYLALRVAYFNELDSYALAHGLNSREIIEGVCLDPRIGDHYNNPSFGYGGYCLPKDTKQLLANYDQIPQNLISAIVESNRTRKDFVSDQIVARKPSVVGVYRLVMKAGSDNFRDSSVQGIMKRIKAKGIEVIVYEPVLDEDLFYNSRVVRDLEAFRAESDLILANRQAPELSDAVEKVYTCDLFGID
SIO_010081: CYR75_RS15735
subclass of: SO_0000673
so part of: CYR75_RS15735
location: complement(1025..2053)
location: region:1025-2053:-1
so has part: feature:1025-2053:-1:exon

WP_101501205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1025-2053:-1:exon

CYR75_RS15740
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15740
old locus tag: CYR75_15735
pseudo: true
so part of: sequence
location: complement(2075..3113)
location: region:2075-3113:-1
so has part: feature:2075-3113:-1:exon
subclass of: SO_0000010

position:2075:-1
position: 2075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3113:-1
position: 3113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2075-3113:-1:exon

CYR75_RS15740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15740
old locus tag: CYR75_15735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005609624.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase family protein
SIO_010081: CYR75_RS15740
subclass of: SO_0000673
so part of: CYR75_RS15740
location: complement(2075..3113)
location: region:2075-3113:-1
so has part: feature:2075-3113:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2075-3113:-1:exon

CYR75_RS16520
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS16520
old locus tag: CYR75_15740
pseudo: true
so part of: sequence
location: 3328..>3498
location: region:3328-3498:1
so has part: feature:3328-3498:1:exon
subclass of: SO_0000010

position:3328:1
position: 3328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3498:1
position: 3498
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3328-3498:1:exon

CYR75_RS16520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS16520
old locus tag: CYR75_15740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611960.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: CYR75_RS16520
subclass of: SO_0000673
so part of: CYR75_RS16520
location: 3328..>3498
location: region:3328-3498:1
so has part: feature:3328-3498:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3328-3498:1:exon

CYR75_RS16525
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS16525
old locus tag: CYR75_15745
so part of: sequence
location: complement(3501..3707)
location: region:3501-3707:-1
so has part: feature:3501-3707:-1:exon
subclass of: SO_0000010

position:3501:-1
position: 3501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3707:-1
position: 3707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3501-3707:-1:exon

CYR75_RS16525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS16525
old locus tag: CYR75_15745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014529321.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKYDAHLAVQRALNAGVLQKECCEVCGKADVDAHHDHYDQPLNVRWLCRRHHVRLHQFGEDMFPLCK
SIO_010081: CYR75_RS16525
subclass of: SO_0000673
so part of: CYR75_RS16525
location: complement(3501..3707)
location: region:3501-3707:-1
so has part: feature:3501-3707:-1:exon

WP_225972960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3501-3707:-1:exon

CYR75_RS16530
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS16530
so part of: sequence
location: complement(3843..4013)
location: region:3843-4013:-1
so has part: feature:3843-4013:-1:exon
subclass of: SO_0000010

position:3843:-1
position: 3843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4013:-1
position: 4013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3843-4013:-1:exon

CYR75_RS16530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS16530
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDEPEKRSAPLGLRVLPSLKSALEQAAKDDRRSVAAMAELILTDWLEEKGYLSRR
SIO_010081: CYR75_RS16530
subclass of: SO_0000673
so part of: CYR75_RS16530
location: complement(3843..4013)
location: region:3843-4013:-1
so has part: feature:3843-4013:-1:exon

WP_158644706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3843-4013:-1:exon

CYR75_RS15755
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15755
old locus tag: CYR75_15750
so part of: sequence
location: 4149..4667
location: region:4149-4667:1
so has part: feature:4149-4667:1:exon
subclass of: SO_0000010

position:4149:1
position: 4149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4667:1
position: 4667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4149-4667:1:exon

CYR75_RS15755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15755
old locus tag: CYR75_15750
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADATPTTPLCVTKTLPFAQTPLTFLFSHLLAALTTHLVAERGCPADLEVGEQQAWEQEAILARARLVGHLAEIARTAPASAHEILLQRMAAVLEGLISSEEPGCDAEDALRFSVPPSGAGMAGVMTLLRRAARGIDLMAELPRYRQRVARLRAVASADGAAASGSLPAKAA
SIO_010081: CYR75_RS15755
subclass of: SO_0000673
so part of: CYR75_RS15755
location: 4149..4667
location: region:4149-4667:1
so has part: feature:4149-4667:1:exon

WP_101501207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4149-4667:1:exon

CYR75_RS15760
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15760
old locus tag: CYR75_15755
so part of: sequence
location: 4902..5420
location: region:4902-5420:1
so has part: feature:4902-5420:1:exon
subclass of: SO_0000010

position:4902:1
position: 4902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5420:1
position: 5420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4902-5420:1:exon

CYR75_RS15760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15760
old locus tag: CYR75_15755
inference: COORDINATES: protein motif:HMM:NF023075.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group I intron-associated PD-(D/E)XK endonuclease
translation: MARQLTLPGSHLWDGGPDTGHDPLRAYPEVEPQVISRHAREIGLSGELLVMSKLIRIGFTVLQPPDHLHHDLMMVWQNRLLRVQVKATTRPYKGAYRFTMSKGYRNNPLGTRPYERCDYDLAALVILPEECVFFTAERRERHCLPVSVIAQLRAHPTHSLFEALSELRQTPS
SIO_010081: CYR75_RS15760
subclass of: SO_0000673
so part of: CYR75_RS15760
location: 4902..5420
location: region:4902-5420:1
so has part: feature:4902-5420:1:exon

WP_101501208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4902-5420:1:exon

CYR75_RS15765
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15765
old locus tag: CYR75_15760
so part of: sequence
location: 6735..6980
location: region:6735-6980:1
so has part: feature:6735-6980:1:exon
subclass of: SO_0000010

position:6735:1
position: 6735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6980:1
position: 6980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6735-6980:1:exon

CYR75_RS15765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15765
old locus tag: CYR75_15760
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQAAAEARGYPVARHLRDLVIAESARTDTSTAQALGQTLLICNTLLRDMRQKELRISPKHGDLLLAALDQLLTQLPRGRAD
SIO_010081: CYR75_RS15765
subclass of: SO_0000673
so part of: CYR75_RS15765
location: 6735..6980
location: region:6735-6980:1
so has part: feature:6735-6980:1:exon

WP_101501209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6735-6980:1:exon

CYR75_RS15770
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15770
old locus tag: CYR75_15765
so part of: sequence
location: complement(6941..7486)
location: region:6941-7486:-1
so has part: feature:6941-7486:-1:exon
subclass of: SO_0000010

position:6941:-1
position: 6941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7486:-1
position: 7486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6941-7486:-1:exon

CYR75_RS15770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15770
old locus tag: CYR75_15765
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEPLGRRRFQPPRGLNRTQRRDRRIIIRGQLKPEPHGKLLMQEVGLGAGIRQFDRHTAKITAGQDNVDMIAVGVGVARGKPAVRVGIDGQACQRRHHDAQPQLIVCTQPLRQRERHMDCRPAATEGLDVVYHPVGLEDGQGAAQGLGAVAQRILDADLGPGMGLDDGAHQSALPRGSCVSS
SIO_010081: CYR75_RS15770
subclass of: SO_0000673
so part of: CYR75_RS15770
location: complement(6941..7486)
location: region:6941-7486:-1
so has part: feature:6941-7486:-1:exon

WP_101501210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6941-7486:-1:exon

CYR75_RS15780
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15780
old locus tag: CYR75_15775
so part of: sequence
location: 7773..8093
location: region:7773-8093:1
so has part: feature:7773-8093:1:exon
subclass of: SO_0000010

position:7773:1
position: 7773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8093:1
position: 8093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7773-8093:1:exon

CYR75_RS15780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15780
old locus tag: CYR75_15775
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLHSSATPLRLPKEGETLLSGQLRHDQKLDRITNLLLDLLNKPNPEQQDLGQRLVNVLIIIEKEVTAQRQEREALKKEITALNDRLQSQDKMLAAICTQLGTPLA
SIO_010081: CYR75_RS15780
subclass of: SO_0000673
so part of: CYR75_RS15780
location: 7773..8093
location: region:7773-8093:1
so has part: feature:7773-8093:1:exon

WP_101501212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7773-8093:1:exon

CYR75_RS15785
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15785
old locus tag: CYR75_15780
pseudo: true
so part of: sequence
location: complement(8648..>9532)
location: region:8648-9532:-1
so has part: feature:8648-9532:-1:exon
subclass of: SO_0000010

position:8648:-1
position: 8648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9532:-1
position: 9532
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8648-9532:-1:exon

CYR75_RS15785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15785
old locus tag: CYR75_15780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611472.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: CYR75_RS15785
subclass of: SO_0000673
so part of: CYR75_RS15785
location: complement(8648..>9532)
location: region:8648-9532:-1
so has part: feature:8648-9532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8648-9532:-1:exon

CYR75_RS15790
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15790
old locus tag: CYR75_15785
pseudo: true
so part of: sequence
location: complement(9657..10847)
location: region:9657-10847:-1
so has part: feature:9657-10847:-1:exon
subclass of: SO_0000010

position:9657:-1
position: 9657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10847:-1
position: 10847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9657-10847:-1:exon

CYR75_RS15790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15790
old locus tag: CYR75_15785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611875.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: CYR75_RS15790
subclass of: SO_0000673
so part of: CYR75_RS15790
location: complement(9657..10847)
location: region:9657-10847:-1
so has part: feature:9657-10847:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9657-10847:-1:exon

CYR75_RS15795
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15795
old locus tag: CYR75_15790
so part of: sequence
location: 11295..12137
location: region:11295-12137:1
so has part: feature:11295-12137:1:exon
subclass of: SO_0000010

position:11295:1
position: 11295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12137:1
position: 12137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11295-12137:1:exon

CYR75_RS15795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15795
old locus tag: CYR75_15790
inference: COORDINATES: protein motif:HMM:NF013235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MQDAPRPKSHDSTRGTLHAFQRRGEVIKPAELIEVRGGEKITLAARRIYNQLLSNAFGPEMAAEGREHRISFSELRGNHTSNDRVTESILSLMQTVVRVRMSDGSTRNVHLLGPTDVEKFGPGIATMLTYELHPKLLPILRDSQIFARLEMQILHGFSTKYGMALYEIIAKRIGLKHIFYNDFETEELRDYLGVPEGKLGPFAALRRKAIEPAVAEVNALAPFSCRVDVVETKGRKITKLRLSWWMKTIEERKLQWEAQQDKQRDLFEPEPPCLGIFDPS
SIO_010081: CYR75_RS15795
subclass of: SO_0000673
so part of: CYR75_RS15795
location: 11295..12137
location: region:11295-12137:1
so has part: feature:11295-12137:1:exon

WP_101501213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11295-12137:1:exon

CYR75_RS15800
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15800
old locus tag: CYR75_15795
so part of: sequence
location: 12194..12820
location: region:12194-12820:1
so has part: feature:12194-12820:1:exon
subclass of: SO_0000010

position:12194:1
position: 12194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12820:1
position: 12820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12194-12820:1:exon

CYR75_RS15800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15800
old locus tag: CYR75_15795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008878357.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MQIIAIAMQKGGVGKSTLARSLAVAASRDGLSVLILDMDAQQSVSQWAERRKADMPVVVFATENELPKKLAQARGVADLVIIDTPPARSTEAPAAVEVADLVLIPTTPDIEPLEQMPRTLRLCRGFSRQAYAVITMANPTSLAEVAHTREVIDTMGAETAPAVLHRRKIHRDASASGQTVQEIDPNSKAAEEVANLWAWVNKKLHFGN
SIO_010081: CYR75_RS15800
subclass of: SO_0000673
so part of: CYR75_RS15800
location: 12194..12820
location: region:12194-12820:1
so has part: feature:12194-12820:1:exon

WP_101501214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12194-12820:1:exon

CYR75_RS16150
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS16150
so part of: sequence
location: 12881..13168
location: region:12881-13168:1
so has part: feature:12881-13168:1:exon
subclass of: SO_0000010

position:12881:1
position: 12881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13168:1
position: 13168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12881-13168:1:exon

CYR75_RS16150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS16150
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKTNPLLAAMKTAEPETDHNEAPSDSASPGRPGAKAASTRAGQKHLGAYFDKGDQILERVAILRMRLDMNNSELIEHAINELWKRHEASRVFGE
SIO_010081: CYR75_RS16150
subclass of: SO_0000673
so part of: CYR75_RS16150
location: 12881..13168
location: region:12881-13168:1
so has part: feature:12881-13168:1:exon

WP_158644707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12881-13168:1:exon

CYR75_RS15810
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15810
old locus tag: CYR75_15805
so part of: sequence
location: 13962..14228
location: region:13962-14228:1
so has part: feature:13962-14228:1:exon
subclass of: SO_0000010

position:13962:1
position: 13962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14228:1
position: 14228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13962-14228:1:exon

CYR75_RS15810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15810
old locus tag: CYR75_15805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017930026.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CopG family transcriptional regulator
translation: MAEKPVTLDELLNTDTRPLDTVFPEREAGREPSAVKPIPKKRVGEKRLTLALDGETYRRLRLHAATTDETHQDILERALTEYLSSVGA
SIO_010081: CYR75_RS15810
subclass of: SO_0000673
so part of: CYR75_RS15810
location: 13962..14228
location: region:13962-14228:1
so has part: feature:13962-14228:1:exon

WP_101501215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13962-14228:1:exon

CYR75_RS15815
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15815
old locus tag: CYR75_15810
so part of: sequence
location: complement(14373..15452)
location: region:14373-15452:-1
so has part: feature:14373-15452:-1:exon
subclass of: SO_0000010

position:14373:-1
position: 14373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15452:-1
position: 15452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14373-15452:-1:exon

CYR75_RS15815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15815
old locus tag: CYR75_15810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013502871.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PLP-dependent cysteine synthase family protein
translation: MQDEWQRKAITILQGDARRSADTHLIKPSFPGLEGISIYLKDESTHPTGSLKHRLARSLVLYGICNGKIRQGTTLVEASSGSTAVSEAYFADLLGLPFIAVMPHSTSRQKVVEIEQCGGKCYFVDSAAMVYDTAQRIALETGGHYLDQFTNAERATDWRGNNNIAESIFQQMEGEEFPVPDWVVMSAGTGGTSATIGRYIRYRNLSTRLCVVDVENSAFYDCFVSGDRDVTCSQGSRIEGIGRPRVEPSFLPDVIDHMIRVPDAASIAAMRILSDRIFRRVGGSTGTNFFGLCWIASKMIEAGQAGSLVSIICDSGGRYGDTYYSEDWVASQGLDLAPWTDALERFLNTGKLELPRRPS
SIO_010081: CYR75_RS15815
subclass of: SO_0000673
so part of: CYR75_RS15815
location: complement(14373..15452)
location: region:14373-15452:-1
so has part: feature:14373-15452:-1:exon

WP_225972961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14373-15452:-1:exon

CYR75_RS15820
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15820
old locus tag: CYR75_15815
so part of: sequence
location: complement(15614..16330)
location: region:15614-16330:-1
so has part: feature:15614-16330:-1:exon
subclass of: SO_0000010

position:15614:-1
position: 15614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16330:-1
position: 16330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15614-16330:-1:exon

CYR75_RS15820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15820
old locus tag: CYR75_15815
inference: COORDINATES: protein motif:HMM:NF015682.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RraA family protein
translation: MNTPLPRPPKYFLGPEPAPLDDDLIALLAQLETTMFGHILYWGSMDRGIQASRGFAPRTVGRALTVQCPAADSTILHHAIGLAKQGDILVIDRLGDDKYACLGDGVAAAAQEAGIVGAIIDGPCTDADEMARMQFPVWCRGTAPVTTRLLDIAGRVHVPVSCGGTAVMPGAAILADSDGVFALPPDEARTMAEIALTRGQIAQKRRETRAPGVALGAATGATRLVEAELARDNGKPSQ
SIO_010081: CYR75_RS15820
subclass of: SO_0000673
so part of: CYR75_RS15820
location: complement(15614..16330)
location: region:15614-16330:-1
so has part: feature:15614-16330:-1:exon

WP_158644708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15614-16330:-1:exon

CYR75_RS15825
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15825
old locus tag: CYR75_15820
so part of: sequence
location: complement(16339..17163)
location: region:16339-17163:-1
so has part: feature:16339-17163:-1:exon
subclass of: SO_0000010

position:16339:-1
position: 16339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17163:-1
position: 17163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16339-17163:-1:exon

CYR75_RS15825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15825
old locus tag: CYR75_15820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011454198.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MPMAVRLSLGFITLFVLFALFGQWLSPHEFRATSLLDRLKPPVGFGGTWTYPLGTDARGRDLLVRLAVGAQITLVVAVVGTLIGAVLGSLLGVLAAARRGFVETVVIGAVDVQASLPIIVVALFVLAMFDSSFTLFLLLIGLTGWEVYARLMRGAVLAAKEQGYVTAVRALGASPYRIYLRHILPNVISVALVQFTVNLPLTVLLETALSFLGLGVQSPLTSLGQIMSEGRDRLLTAWWLTLFPGTIIFLLALSISLVGDWVRDRFDPTLRTQK
SIO_010081: CYR75_RS15825
subclass of: SO_0000673
so part of: CYR75_RS15825
location: complement(16339..17163)
location: region:16339-17163:-1
so has part: feature:16339-17163:-1:exon

WP_101501217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16339-17163:-1:exon

CYR75_RS15830
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15830
old locus tag: CYR75_15825
so part of: sequence
location: complement(17196..18119)
location: region:17196-18119:-1
so has part: feature:17196-18119:-1:exon
subclass of: SO_0000010

position:17196:-1
position: 17196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18119:-1
position: 18119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17196-18119:-1:exon

CYR75_RS15830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15830
old locus tag: CYR75_15825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011454199.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MIGFILSKVARAVITLLVTVTLVFIFIRFSGDPAAALAPPDAPQAVIEQYRRALGLDQPIWVQYAGYLGRIAQGDFGYSIHSGRPSLEIFLDRLPATLRLGSTALVIALISGLTFGSIAALNRGRPIDRLVMGFSVFAFAMPNFLFGLVMILVGSLVFNVYLGGQGATGSWTGLLAPALTLGLASMGSYARFTRSSLLETINKPFMLAAEARGIPYKRRLIRHALPNAAIPLVTLVGLSIGSLIAGSVVTEQVFAWPGVGQLLVRSVATRDIATVQFLVLAIAATMIVANLVVDMLYLVIDPRIRAR
SIO_010081: CYR75_RS15830
subclass of: SO_0000673
so part of: CYR75_RS15830
location: complement(17196..18119)
location: region:17196-18119:-1
so has part: feature:17196-18119:-1:exon

WP_101501218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17196-18119:-1:exon

CYR75_RS15835
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15835
old locus tag: CYR75_15830
so part of: sequence
location: complement(18116..19726)
location: region:18116-19726:-1
so has part: feature:18116-19726:-1:exon
subclass of: SO_0000010

position:18116:-1
position: 18116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19726:-1
position: 19726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18116-19726:-1:exon

CYR75_RS15835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15835
old locus tag: CYR75_15830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020423743.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MPAPSPSPVLTVRDLTIGLPSGADRELAVADIDLTIAPGETLCLVGESGSGKSVVAQAIMGMLAPVLPMTSGTIALQGTQNPPQRSAAYNALRGPRVAMVFQDAVSSLNPIQRIGRQLEEILQVHGVPRQERRKRVMDMLAAVLLPDPERAYRSYPHEMSGGQAQRVVIAGALLLNPALLIADEPTTALDVTTQAEILELIEKLKADFNTAVLFITHDFGVVADIADHVVVMKDGRIVEAGSASAVLKNPQHGYTKRLLRAAALDTRAPTASDEDFILDVRDLSLTYRRGMFFNRTEVAAVRDVTFALRKGQTLAVVGESGSGKSSLAKCLLRLQDVDSGRILFKGQDVTTLQGVGLRKFRSKVQVVLQDPFGALDPRFKTIDAVAEGPIIHGMPKSEARARAMDMLELVGLTPQAGERYPQEFSGGQRQRICIARALVLEPELLIADEAVSALDVSIQVQILDLFADLQKRLGFSMVFITHDLHVAAAISDEVLVMQHGRVVEQGATADVFANPQKPYTSDLLQAAPGQKRLLVA
SIO_010081: CYR75_RS15835
subclass of: SO_0000673
so part of: CYR75_RS15835
location: complement(18116..19726)
location: region:18116-19726:-1
so has part: feature:18116-19726:-1:exon

WP_101501219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18116-19726:-1:exon

CYR75_RS15840
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15840
old locus tag: CYR75_15835
so part of: sequence
location: complement(19727..21238)
location: region:19727-21238:-1
so has part: feature:19727-21238:-1:exon
subclass of: SO_0000010

position:19727:-1
position: 19727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21238:-1
position: 21238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19727-21238:-1:exon

CYR75_RS15840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15840
old locus tag: CYR75_15835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011454201.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MPFRAVAQTRPDLVIAVDNLWETMDPVIGISTSGGRVHWNLFDTLVRRNRWDDPDGTELVPWLATSWERTSPTIWTFQLRDGVKFHDGHVMDAEDVAFSISEKRLWGEEPEAPRGTRYAAGIVRVEATGPLTVEIETEAPDPSIPYRMVTPIGFVLPKHYYEEAGRDAFGQKPMGTGPYKLVSFNPSTELVAEAFDDYWNGPIPAQSLTFRIVPEFSTRYAGLAAGEFDVIVNIPSDQIEVVRSTPGIKVLEKSIENYPMFAFNTLNTEDLPDNPLTDPNLRKAMVSAIDREGITQALWGDATFVPTPFNFPEYGDYYDPDRKRAYPYDPERARELLEMSDYDGEELIWHIVRGFYPNYEVAAEFMVEQWRDIGINVRIRIVDNFSLAYERPFHLLNMSMSSEFSGDPYRPLWLDWGPDSSRTTAAHKTWVPSDRFLEIGERFEDAQDFEARKAAYLELVDEWEDITPGMYFWRNVVSFGIREDLNWDPGNSDVTIFDKMFMG
SIO_010081: CYR75_RS15840
subclass of: SO_0000673
so part of: CYR75_RS15840
location: complement(19727..21238)
location: region:19727-21238:-1
so has part: feature:19727-21238:-1:exon

WP_225972958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19727-21238:-1:exon

CYR75_RS15845
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15845
old locus tag: CYR75_15840
so part of: sequence
location: complement(21324..22199)
location: region:21324-22199:-1
so has part: feature:21324-22199:-1:exon
subclass of: SO_0000010

position:21324:-1
position: 21324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22199:-1
position: 22199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21324-22199:-1:exon

CYR75_RS15845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15845
old locus tag: CYR75_15840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011454202.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon-nitrogen hydrolase family protein
translation: MIENRTGGMSMQQNLRLCIAQMTSTNQHAGNIAFVEDAVRHAAAQGCDLLALPEAAGMVNRDRDDARRQITEEADDPFINACKRLAAEHGIWIQTGSTPIASGDGRFLNHANLINASGTSVASYDKIHLFDVFLEGRPATGESSRYAPGAEAVLVDTPWGPWGLTICYDLRFPHLYRDFARRDATVMFVPSAFTIPTGEAHWEVLLRARAIENGAFVVAAAQVGNHDDGRQTWGHSLVVDPWGKVMVDMGGTDPGLEVIDLDLGQVRRTRDQIPSLRNQRDYKLRHITGSN
SIO_010081: CYR75_RS15845
subclass of: SO_0000673
so part of: CYR75_RS15845
location: complement(21324..22199)
location: region:21324-22199:-1
so has part: feature:21324-22199:-1:exon

WP_225972959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21324-22199:-1:exon

CYR75_RS15850
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15850
old locus tag: CYR75_15845
so part of: sequence
location: 22274..23185
location: region:22274-23185:1
so has part: feature:22274-23185:1:exon
subclass of: SO_0000010

position:22274:1
position: 22274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23185:1
position: 23185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22274-23185:1:exon

CYR75_RS15850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15850
old locus tag: CYR75_15845
inference: COORDINATES: protein motif:HMM:NF015431.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MSPIRRLPSLNALRVLEAIHQAGSITAAARHLRISHSAVSHQVKILEAWATDPLFFSKGRVTMLTDAGKSLAGVTHEAFDAIRHEIDRLPLRGLRSVSLACLPLVATHWLMPRIAGFNAKHPEINLHLSLSQTDRPVTPRPDIEIQFARRNQLTGQDIALLPGDAIPVCSPALLGGRCPDELLASGPLLFDEDLRMWSQWHELTGHPARSASGSGLMLEGSVLLQGAAIAGLGIALCRRCFLERDLAEGRLVALSDQAIDDDWCYFLRCQADKRHLPEIEVVLTALVDASAASRHARAAQFTE
SIO_010081: CYR75_RS15850
subclass of: SO_0000673
so part of: CYR75_RS15850
location: 22274..23185
location: region:22274-23185:1
so has part: feature:22274-23185:1:exon

WP_225972962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22274-23185:1:exon

CYR75_RS15855
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15855
old locus tag: CYR75_15850
so part of: sequence
location: complement(23242..23781)
location: region:23242-23781:-1
so has part: feature:23242-23781:-1:exon
subclass of: SO_0000010

position:23242:-1
position: 23242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23781:-1
position: 23781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23242-23781:-1:exon

CYR75_RS15855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15855
old locus tag: CYR75_15850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655531.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MILGYARVSTEDQYLDAQISALTAAGAERIWAEKISGSKRARPELERMLDQLRPGDVVVVTKYDRLSRSLQDLLTLVEQVRGRGAGFRSLAEDIDTTTPAGRLVFHVFASIAQFERERIAERTREGLAAARRRGRVGGRPPALSPEQKEEVRRLRDSEGRGIAELSRLFRVSENTIRRA
SIO_010081: CYR75_RS15855
subclass of: SO_0000673
so part of: CYR75_RS15855
location: complement(23242..23781)
location: region:23242-23781:-1
so has part: feature:23242-23781:-1:exon

WP_101501222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23242-23781:-1:exon

CYR75_RS15860
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15860
old locus tag: CYR75_15855
so part of: sequence
location: complement(23885..25957)
location: region:23885-25957:-1
so has part: feature:23885-25957:-1:exon
subclass of: SO_0000010

position:23885:-1
position: 23885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25957:-1
position: 25957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23885-25957:-1:exon

CYR75_RS15860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15860
old locus tag: CYR75_15855
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF012745.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MLNCQGYVSANDESSLGGRGSSEIETLLRGATAHLSKHEFSSAQMISEQIRVATDRFDPEIRVQGDNQPRPYTIAVVAHVARDEHHRLVNTLINLNCERFEIIFLENAMDDIWVLPIEAASSNVTVARLKFNAGIGVARNLALRLASGEGIIFIDDDGHASAASIESLISTFEVYKAAAVRGRVVLKTSGLEPPAHYAPGTDLRQHYCDIEGFAVWRTASARRVGGFDPILYGHEGVDLTARMFPFEGPDAFLYEPSAVLEHDFSRDTAGAEMKHERHRRLRKYCGFKAEHFDDVLRLFESQIHRNPVARATLFQRKWFVADGPTQVGKAKAPVGILTTCYNGGAFIPDFAAALAAQTDDAIELIFVDDGSDDGSVEMLDRYLPPSISRRVIEGGRLGRSGALNLILDAATTELCMIADVDDIMFPYRTAWTRKAYEAFPDADMIGFMICDYNLHSRASRPLPVRRTNLQVRKLLGMPAPFPAFSFKRASITEQFDVGMTAGIDCDWLFRSLNRGGCQGYILPLLAAFYRTHNGQITTTSRETQRAVALQNIAECHASILGTEPKVTLEIEMLTGWTPIRSGQAFWQVNDYAVSLMEAMADKELPWADEAAIEITRHLDAVRLLIARNDSKATAKAAEEAQSLLTQKVSTIAEVSARCAEIETEIERVMSSNSMKITAPLRALARIIRGE
SIO_010081: CYR75_RS15860
subclass of: SO_0000673
so part of: CYR75_RS15860
location: complement(23885..25957)
location: region:23885-25957:-1
so has part: feature:23885-25957:-1:exon

WP_158644709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23885-25957:-1:exon

CYR75_RS15865
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS15865
old locus tag: CYR75_15860
so part of: sequence
location: complement(26099..27976)
location: region:26099-27976:-1
so has part: feature:26099-27976:-1:exon
subclass of: SO_0000010

position:26099:-1
position: 26099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27976:-1
position: 27976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26099-27976:-1:exon

CYR75_RS15865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS15865
old locus tag: CYR75_15860
inference: COORDINATES: protein motif:HMM:NF012745.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MTIPKISVIVPLYNTERYLTKCLESIMAQTLREIEIICVDDCSPDKSAELVSQFAKQDKRVRLIRHDQNAGLGGARNTGIINAHADYVASVDSDDFIEPDFLEALWQATEEGRFDVVVCGYKKVDAEGRTIGTGMQKVATMDPIPKEQDPFKISDPAFWNKLWRKSLFTESGIFFPDHIYHQDSATTPRIYTKAKNVKFIGGTRYNYLIRPDSVTQSVSDKHLIDRFRCVDVLKEFFIEQGIYEDLTSSLTERIYSGYSYHVGNVIKNRHGGDSVTDAYLRHLLIMREGYLEHDMTVRMMSLEEKADYLLKHKPIPRVKLPAGTVSASAQKEPEPRPPLPSNPRIMVLTLFSGENEFEECCSALDGQVHKNWDHKVFRGLGNHQAHRSLYQFIMDNNRDYDLFFKLDADMVFSHSGVLCEIIKIFRDRPALDHLIVACDDYMTGERILGVHTFSGRVRWRESSSGIFNDPNPACAGTRRIIRDPASSFFKHASDPSSLQAFHFGAHRALKLVQRGYSIAEKRVAAMQLQWDVLNGLWRQYKKHGDRRHILALVAADLVIRGKLGDGAHDYHDPDLLMQYDVFSVFTGAALAELVRENWDDEERRVSYFNLAVGPEGLEKLKLEAA
SIO_010081: CYR75_RS15865
subclass of: SO_0000673
so part of: CYR75_RS15865
location: complement(26099..27976)
location: region:26099-27976:-1
so has part: feature:26099-27976:-1:exon

WP_101501224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26099-27976:-1:exon

CYR75_RS16155
type: Gene
subclass of: SO_0000704
RO_0002162: 2065379
locus tag: CYR75_RS16155
so part of: sequence
location: complement(28056..28478)
location: region:28056-28478:-1
so has part: feature:28056-28478:-1:exon
subclass of: SO_0000010

position:28056:-1
position: 28056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28478:-1
position: 28478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28056-28478:-1:exon

CYR75_RS16155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2065379
locus tag: CYR75_RS16155
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGRLIPSFANLYKEVEDLRLLKRKSAAASNQNLRPNEQDDLLRSYLSLKDDFEKVAKAESTMVKRNLKLMNELASLEEKLDIQEKAKISTIANLEAQLHAEREQKYAAECRVAEYLASTSWRVTAPLRSARSMAFRFKR
SIO_010081: CYR75_RS16155
subclass of: SO_0000673
so part of: CYR75_RS16155
location: complement(28056..28478)
location: region:28056-28478:-1
so has part: feature:28056-28478:-1:exon

WP_158644710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28056-28478:-1:exon