Streptomyces dengpaensis strain XZHG99 plasmid unnamed2, complete sequence.
Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces.
Complete genome sequence of Streptomyces dengpaensis, the producer of angucyclines
Submitted (07-FEB-2018) School of Biological Science and Biotechnology, Unversity of Jinan, Qixian, Jinan 250022, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP026654.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: other v. OCT-2017\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 114.0x\nSequencing Technology :: Illumina MiSeq; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/23/2023 04:01:30\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 8,140\nCDSs (total) :: 8,045\nGenes (coding) :: 7,581\nCDSs (with protein) :: 7,581\nGenes (RNA) :: 95\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 73\nncRNAs :: 4\nPseudo Genes (total) :: 464\nCDSs (without protein) :: 464\nPseudo Genes (ambiguous residues) :: 0 of 464\nPseudo Genes (frameshifted) :: 140 of 464\nPseudo Genes (incomplete) :: 409 of 464\nPseudo Genes (internal stop) :: 20 of 464\nPseudo Genes (multiple problems) :: 98 of 464\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
China: Dengpa District, Tibet Autonomous Region
COORDINATES: similar to AA sequence:RefSeq:WP_019074449.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011109749.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_011109744.1
COORDINATES: protein motif:HMM:NF013122.2
COORDINATES: similar to AA sequence:RefSeq:WP_006129974.1
COORDINATES: similar to AA sequence:RefSeq:WP_012998016.1
COORDINATES: similar to AA sequence:RefSeq:WP_012998017.1
COORDINATES: similar to AA sequence:RefSeq:WP_012998018.1
COORDINATES: similar to AA sequence:RefSeq:WP_019766790.1
COORDINATES: similar to AA sequence:RefSeq:WP_012998019.1
COORDINATES: similar to AA sequence:RefSeq:WP_005477041.1
COORDINATES: similar to AA sequence:RefSeq:WP_012998021.1
COORDINATES: protein motif:HMM:NF025052.2
COORDINATES: similar to AA sequence:RefSeq:WP_014670178.1
COORDINATES: similar to AA sequence:RefSeq:WP_008734324.1
COORDINATES: similar to AA sequence:RefSeq:WP_019521097.1
COORDINATES: similar to AA sequence:RefSeq:WP_014053989.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018106296.1
COORDINATES: similar to AA sequence:RefSeq:WP_010279902.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_015449452.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074413.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074412.1
COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011039416.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074403.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_014677508.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074400.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074399.1
COORDINATES: similar to AA sequence:RefSeq:WP_010064722.1
COORDINATES: similar to AA sequence:RefSeq:WP_018554998.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074395.1
COORDINATES: similar to AA sequence:RefSeq:WP_010988911.1
COORDINATES: similar to AA sequence:RefSeq:WP_018569242.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074388.1
RRQRL motif-containing zinc-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019074386.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449470.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074384.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074383.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074381.1
COORDINATES: similar to AA sequence:RefSeq:WP_010988920.1
COORDINATES: similar to AA sequence:RefSeq:WP_019329441.1
COORDINATES: similar to AA sequence:RefSeq:WP_019329440.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677470.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074374.1
COORDINATES: similar to AA sequence:RefSeq:WP_014043581.1
COORDINATES: similar to AA sequence:RefSeq:WP_003954247.1
COORDINATES: similar to AA sequence:RefSeq:WP_011039389.1
COORDINATES: similar to AA sequence:RefSeq:WP_007505376.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074365.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074364.1
COORDINATES: similar to AA sequence:RefSeq:WP_003979120.1
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015449495.1
COORDINATES: similar to AA sequence:RefSeq:WP_004994192.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016828477.1
COORDINATES: protein motif:HMM:NF012792.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010471337.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449524.1
COORDINATES: similar to AA sequence:RefSeq:WP_019329412.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522993.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074338.1