Streptomyces dengpaensis strain XZHG99 plasmid unnamed1, complete sequence.
Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces.
Complete genome sequence of Streptomyces dengpaensis, the producer of angucyclines
Submitted (07-FEB-2018) School of Biological Science and Biotechnology, Unversity of Jinan, Qixian, Jinan 250022, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP026653.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: other v. OCT-2017\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 114.0x\nSequencing Technology :: Illumina MiSeq; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/23/2023 04:01:30\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 8,140\nCDSs (total) :: 8,045\nGenes (coding) :: 7,581\nCDSs (with protein) :: 7,581\nGenes (RNA) :: 95\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 73\nncRNAs :: 4\nPseudo Genes (total) :: 464\nCDSs (without protein) :: 464\nPseudo Genes (ambiguous residues) :: 0 of 464\nPseudo Genes (frameshifted) :: 140 of 464\nPseudo Genes (incomplete) :: 409 of 464\nPseudo Genes (internal stop) :: 20 of 464\nPseudo Genes (multiple problems) :: 98 of 464\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
China: Dengpa District, Tibet Autonomous Region
COORDINATES: similar to AA sequence:RefSeq:WP_007504784.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014043692.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449432.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449433.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015449434.1
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015449435.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449436.1
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015449437.1
GO:0018193 - peptidyl-amino acid modification [Evidence IEA]
aspartyl/asparaginyl beta-hydroxylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015449438.1
COORDINATES: similar to AA sequence:RefSeq:WP_017555675.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011604223.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003963976.1
methyltransferase domain-containing protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_009717707.1
COORDINATES: similar to AA sequence:RefSeq:WP_014137781.1
COORDINATES: similar to AA sequence:RefSeq:WP_020573039.1
COORDINATES: similar to AA sequence:RefSeq:WP_012998016.1
COORDINATES: protein motif:HMM:NF025669.2
COORDINATES: similar to AA sequence:RefSeq:WP_003954250.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074426.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074425.1
COORDINATES: similar to AA sequence:RefSeq:WP_020124381.1
COORDINATES: similar to AA sequence:RefSeq:WP_010279005.1
COORDINATES: similar to AA sequence:RefSeq:WP_018555006.1
COORDINATES: similar to AA sequence:RefSeq:WP_008749757.1
COORDINATES: similar to AA sequence:RefSeq:WP_003954285.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109725.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109724.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_018554988.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109722.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074406.1
COORDINATES: protein motif:HMM:NF014442.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018554990.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677512.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677511.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449458.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677509.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074400.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074399.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074398.1
COORDINATES: protein motif:HMM:NF040363.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074396.1
COORDINATES: similar to AA sequence:RefSeq:WP_018554999.1
COORDINATES: similar to AA sequence:RefSeq:WP_014043612.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074393.1
COORDINATES: similar to AA sequence:RefSeq:WP_018569242.1
COORDINATES: similar to AA sequence:RefSeq:WP_003979046.1
RRQRL motif-containing zinc-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011109707.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449470.1
COORDINATES: similar to AA sequence:RefSeq:WP_007505690.1
COORDINATES: similar to AA sequence:RefSeq:WP_007505692.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109703.1
COORDINATES: similar to AA sequence:RefSeq:WP_019329446.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109701.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109700.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677476.1
COORDINATES: similar to AA sequence:RefSeq:WP_010645459.1
COORDINATES: similar to AA sequence:RefSeq:WP_018569256.1
COORDINATES: similar to AA sequence:RefSeq:WP_019884676.1
COORDINATES: similar to AA sequence:RefSeq:WP_018563321.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109694.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074371.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449484.1
COORDINATES: similar to AA sequence:RefSeq:WP_018722292.1
COORDINATES: similar to AA sequence:RefSeq:WP_009741112.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074365.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074364.1
COORDINATES: protein motif:HMM:NF019322.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009304243.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449495.1
COORDINATES: similar to AA sequence:RefSeq:WP_009338618.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019356574.1
COORDINATES: similar to AA sequence:RefSeq:WP_010645386.1
COORDINATES: similar to AA sequence:RefSeq:WP_008407043.1
COORDINATES: similar to AA sequence:RefSeq:WP_015575588.1
COORDINATES: similar to AA sequence:RefSeq:WP_003954392.1
COORDINATES: similar to AA sequence:RefSeq:WP_014043463.1
COORDINATES: protein motif:HMM:NF017542.2
GO:0006260 - DNA replication [Evidence IEA]; GO:0006276 - plasmid maintenance [Evidence IEA]