Dongshaea marina strain DM2 chromosome, complete genome.
Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Dongshaea.
A facutatively anaerobic marine bacterium
Submitted (14-APR-2018) Institute of Oceanography, National Taiwan University, No. 1, Sec. 4, Roosevelt Rd., Taipei 106, Taiwan
REFSEQ INFORMATION: The reference sequence is identical to\nCP028897.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2018\nAssembly Method :: HGAP v. 2013\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 90.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/08/2022 02:24:36\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,909\nCDSs (total) :: 4,761\nGenes (coding) :: 4,517\nCDSs (with protein) :: 4,517\nGenes (RNA) :: 148\nrRNAs :: 12, 10, 10 (5S, 16S, 23S)\ncomplete rRNAs :: 12, 10, 10 (5S, 16S, 23S)\ntRNAs :: 112\nncRNAs :: 4\nPseudo Genes (total) :: 244\nCDSs (without protein) :: 244\nPseudo Genes (ambiguous residues) :: 0 of 244\nPseudo Genes (frameshifted) :: 206 of 244\nPseudo Genes (incomplete) :: 47 of 244\nPseudo Genes (internal stop) :: 8 of 244\nPseudo Genes (multiple problems) :: 17 of 244\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_005893135.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_010672286.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005351563.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009142929.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_017412686.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024242.2
helix-turn-helix domain-containing protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016348983.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019935623.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00080
yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005346773.1
COORDINATES: similar to AA sequence:RefSeq:WP_019446301.1
COORDINATES: similar to AA sequence:RefSeq:WP_005903830.1
GO:0097163 - sulfur carrier activity [Evidence IEA]
GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005323924.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012728250.1
COORDINATES: similar to AA sequence:RefSeq:WP_012728251.1
COORDINATES: protein motif:HMM:NF010133.0
COORDINATES: similar to AA sequence:RefSeq:YP_005224488.1
COORDINATES: protein motif:HMM:NF014443.2
GO:0015379 - potassium:chloride symporter activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017410859.1
menaquinone-dependent protoporphyrinogen IX dehydrogenase
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF015758.2
COORDINATES: similar to AA sequence:RefSeq:WP_000376337.1
NupC/NupG family nucleoside CNT transporter
COORDINATES: similar to AA sequence:RefSeq:WP_019446227.1
COORDINATES: protein motif:HMM:NF015437.2
COORDINATES: protein motif:HMM:NF023358.2
COORDINATES: protein motif:HMM:NF013760.2
MotA/TolQ/ExbB proton channel family protein
COORDINATES: protein motif:HMM:NF014525.2
COORDINATES: protein motif:HMM:NF015506.2
COORDINATES: similar to AA sequence:RefSeq:WP_005307268.1
GO:0008168 - methyltransferase activity [Evidence IEA]
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
COORDINATES: similar to AA sequence:RefSeq:WP_017410819.1
SCP2 sterol-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014290653.1
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
ubiquinone biosynthesis regulatory protein kinase UbiB
COORDINATES: protein motif:HMM:NF015605.2
COORDINATES: protein motif:HMM:NF012235.2
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF015513.2
COORDINATES: similar to AA sequence:RefSeq:WP_014290872.1
COORDINATES: similar to AA sequence:RefSeq:WP_009143849.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011788488.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006878 - cellular copper ion homeostasis [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Cu(I)-responsive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005346875.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019002022.1
inactive transglutaminase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014292974.1
COORDINATES: similar to AA sequence:RefSeq:WP_004728762.1
COORDINATES: similar to AA sequence:RefSeq:WP_017412161.1
GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019840316.1
thiol:disulfide interchange protein DsbA/DsbL
COORDINATES: protein motif:HMM:NF016777.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017784263.1
COORDINATES: similar to AA sequence:RefSeq:WP_005900584.1
COORDINATES: similar to AA sequence:RefSeq:WP_017779449.1
GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004242485.1
COORDINATES: similar to AA sequence:RefSeq:WP_015878665.1
COORDINATES: protein motif:HMM:NF022426.2
COORDINATES: similar to AA sequence:RefSeq:WP_011704909.1
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF022636.2
COORDINATES: protein motif:HMM:NF003455.0
GO:0008859 - exoribonuclease II activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015879946.1
multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005307097.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF027619.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF012742.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF016807.2
COORDINATES: protein motif:HMM:NF040755.1
COORDINATES: similar to AA sequence:RefSeq:WP_020077854.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011704759.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005309404.1
PTS N-acetylgalactosamine transporter subunit IIB
COORDINATES: similar to AA sequence:RefSeq:WP_005354369.1
PTS N-acetylgalactosamine transporter subunit IIC
PTS system mannose/fructose/sorbose family transporter subunit IID
COORDINATES: protein motif:HMM:NF015570.2
COORDINATES: similar to AA sequence:RefSeq:WP_005309398.1
PTS galactosamine/N-acetylgalactosamine transporter subunit IIA
COORDINATES: protein motif:HMM:TIGR00221.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_017785655.1
tagatose bisphosphate family class II aldolase
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:NF024799.2
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:TIGR01730.1
COORDINATES: similar to AA sequence:RefSeq:WP_011919800.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018184.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF017619.2
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1
GO:0004455 - ketol-acid reductoisomerase activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008722.0
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF036804.2
COORDINATES: protein motif:HMM:NF028001.2
COORDINATES: similar to AA sequence:RefSeq:WP_005351742.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016293.2
COORDINATES: similar to AA sequence:RefSeq:WP_005329404.1
GO:0008756 - o-succinylbenzoate-CoA ligase activity [Evidence IEA]
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003473.0
GO:0016836 - hydro-lyase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005350818.1
GO:0008935 - 1,4-dihydroxy-2-naphthoyl-CoA synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03695.1
GO:0070205 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity [Evidence IEA]
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_005316003.1
GO:0070204 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase activity [Evidence IEA]
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase
COORDINATES: protein motif:HMM:TIGR00543.1
GO:0008909 - isochorismate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005350822.1
GO:0046428 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity [Evidence IEA]
1,4-dihydroxy-2-naphthoate octaprenyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014290782.1
COORDINATES: similar to AA sequence:RefSeq:WP_005357106.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF012876.2
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005897508.1
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:NF016847.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF025677.2
transposase zinc-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019934610.1
GO:0016829 - lyase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014290826.1
COORDINATES: similar to AA sequence:RefSeq:WP_001523629.1
COORDINATES: similar to AA sequence:RefSeq:WP_019840137.1
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
molybdopterin-synthase adenylyltransferase MoeB
COORDINATES: similar to AA sequence:RefSeq:WP_005331007.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014290830.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR02532.1
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:NF013539.2
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016350012.1
N-acetylmannosamine-6-phosphate 2-epimerase
COORDINATES: protein motif:HMM:NF003461.0
COORDINATES: similar to AA sequence:RefSeq:WP_016350014.1
COORDINATES: protein motif:HMM:NF003164.0
GO:0008747 - N-acetylneuraminate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005323808.1
COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1
GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]
GO:0015977 - carbon fixation [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: protein motif:HMM:NF025736.2
COORDINATES: protein motif:HMM:NF013088.2
4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF
COORDINATES: similar to AA sequence:RefSeq:WP_010634903.1
COORDINATES: protein motif:HMM:NF009784.2
GO:0000030 - mannosyltransferase activity [Evidence IEA]; GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO:0006493 - protein O-linked glycosylation [Evidence IEA]
lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005304025.1
4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase
COORDINATES: similar to AA sequence:RefSeq:WP_011899032.1
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA
COORDINATES: similar to AA sequence:RefSeq:WP_017412056.1
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
COORDINATES: similar to AA sequence:RefSeq:WP_017787720.1
GO:0008483 - transaminase activity [Evidence IEA]
UDP-4-amino-4-deoxy-L-arabinose aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017784362.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_011898209.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]; GO:0009020 - tRNA (guanosine-2'-O-)-methyltransferase activity [Evidence IEA]
GO:0030488 - tRNA methylation [Evidence IEA]
tRNA (guanosine(18)-2'-O)-methyltransferase TrmH
COORDINATES: similar to AA sequence:RefSeq:WP_005897951.1
GO:0008728 - GTP diphosphokinase activity [Evidence IEA]; GO:0008893 - guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity [Evidence IEA]
GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]
bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_012728408.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_017785120.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005348341.1
trimeric intracellular cation channel family protein
COORDINATES: protein motif:HMM:NF015995.2
COORDINATES: protein motif:HMM:NF014680.2
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: protein motif:HMM:NF013654.2
COORDINATES: similar to AA sequence:RefSeq:WP_019935251.1
COORDINATES: similar to AA sequence:RefSeq:WP_010675247.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF039469.1
COORDINATES: similar to AA sequence:RefSeq:WP_005358859.1
2-hydroxycarboxylate transporter family protein
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_017412165.1
COORDINATES: similar to AA sequence:RefSeq:WP_005318172.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: similar to AA sequence:RefSeq:WP_012077941.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF033749.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019934510.1
GO:0010974 - negative regulation of division septum assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012728414.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012728413.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: protein motif:HMM:NF023982.2
COORDINATES: similar to AA sequence:RefSeq:WP_016349241.1
COORDINATES: protein motif:HMM:NF013700.2
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017411918.1
GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
GO:0006007 - glucose catabolic process [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014290755.1
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051262 - protein tetramerization [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005354230.1
GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]
GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_009874494.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]; GO:0051604 - protein maturation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012383.2
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: protein motif:HMM:TIGR01738.1
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023540.2
putative metalloprotease CJM1_0395 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005356440.1
COORDINATES: similar to AA sequence:RefSeq:WP_005342682.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019000705.1
GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00683.1
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009273 - peptidoglycan-based cell wall biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017412544.1
COORDINATES: protein motif:HMM:TIGR00813.1
COORDINATES: protein motif:HMM:NF040884.1
GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00218.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003011.0
COORDINATES: similar to AA sequence:RefSeq:WP_019934485.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010675728.1
ribosome-associated heat shock protein Hsp15
COORDINATES: protein motif:HMM:TIGR01713.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010675726.1
COORDINATES: similar to AA sequence:RefSeq:WP_010947050.1
COORDINATES: similar to AA sequence:RefSeq:WP_011704542.1
type II secretion system inner membrane protein GspF
COORDINATES: similar to AA sequence:RefSeq:WP_012728593.1
type II secretion system major pseudopilin GspG
COORDINATES: protein motif:HMM:TIGR01708.2
type II secretion system minor pseudopilin GspH
COORDINATES: protein motif:HMM:TIGR01707.1
type II secretion system minor pseudopilin GspI
COORDINATES: protein motif:HMM:TIGR01711.1
type II secretion system minor pseudopilin GspJ
COORDINATES: protein motif:HMM:NF037980.1
GO:0009306 - protein secretion [Evidence IEA]
type II secretion system minor pseudopilin GspK
COORDINATES: protein motif:HMM:TIGR01709.2
COORDINATES: protein motif:HMM:NF016493.2
COORDINATES: protein motif:HMM:NF013376.2
COORDINATES: similar to AA sequence:RefSeq:WP_016350382.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF014958.2
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
COORDINATES: protein motif:HMM:NF015535.2
COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005350169.1
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1
COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005331168.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1
COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1
COORDINATES: similar to AA sequence:RefSeq:WP_000004106.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1
COORDINATES: similar to AA sequence:RefSeq:WP_005455662.1
COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1
COORDINATES: similar to AA sequence:RefSeq:WP_005350155.1
COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1
COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1
COORDINATES: similar to AA sequence:RefSeq:WP_005319713.1
COORDINATES: similar to AA sequence:RefSeq:WP_005307985.1
COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1
COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006232360.1
COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1
COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1
COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014290658.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF013109.2
COORDINATES: protein motif:HMM:NF014567.2
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_013358747.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005358819.1
COORDINATES: similar to AA sequence:RefSeq:WP_005357608.1
COORDINATES: similar to AA sequence:RefSeq:WP_005360330.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015878832.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024304.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF016115.2
COORDINATES: protein motif:HMM:NF015197.2
COORDINATES: similar to AA sequence:RefSeq:WP_005306341.1
COORDINATES: similar to AA sequence:RefSeq:WP_005339863.1
COORDINATES: similar to AA sequence:RefSeq:WP_017411784.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005363318.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: similar to AA sequence:RefSeq:WP_014291017.1
16S rRNA pseudouridine(516) synthase RsuA
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: protein motif:HMM:NF017534.2
COORDINATES: similar to AA sequence:RefSeq:WP_014068447.1
GO:0004594 - pantothenate kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011707705.1
COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_008212104.1
COORDINATES: similar to AA sequence:RefSeq:WP_011707704.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934469.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1
COORDINATES: similar to AA sequence:RefSeq:WP_005341838.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014291234.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_014291964.1
COORDINATES: similar to AA sequence:RefSeq:WP_005332323.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF019301.2
COORDINATES: similar to AA sequence:RefSeq:WP_005059070.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_015879752.1
GO:0070069 - cytochrome complex [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005333439.1
COORDINATES: protein motif:HMM:NF015558.2
putative sulfate exporter family transporter
COORDINATES: protein motif:HMM:NF019344.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003235011.1
COORDINATES: similar to AA sequence:RefSeq:WP_014291469.1
COORDINATES: similar to AA sequence:RefSeq:WP_019936027.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
23S rRNA pseudouridine(1911/1915/1917) synthase RluD
COORDINATES: similar to AA sequence:RefSeq:WP_019936028.1
outer membrane protein assembly factor BamD
COORDINATES: protein motif:HMM:TIGR01450.1
GO:0009338 - exodeoxyribonuclease V complex [Evidence IEA]
GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: protein motif:HMM:TIGR01447.1
COORDINATES: protein motif:HMM:NF016800.2
pilin glycosylation ligase domain-containing protein
COORDINATES: protein motif:HMM:NF023274.2
Wzy polymerase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005341557.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005306061.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_005342888.1
pilus (MSHA type) biogenesis protein MshL
COORDINATES: similar to AA sequence:RefSeq:WP_010672622.1
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: similar to AA sequence:RefSeq:WP_011704368.1
COORDINATES: similar to AA sequence:RefSeq:WP_005900220.1
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011106342.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019575.2
COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1
COORDINATES: similar to AA sequence:RefSeq:WP_014291310.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005328018.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005352888.1
COORDINATES: similar to AA sequence:RefSeq:WP_005902412.1
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02099.1
COORDINATES: similar to AA sequence:RefSeq:WP_014291316.1
GO:0008237 - metallopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: similar to AA sequence:RefSeq:WP_017412473.1
heme ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019933464.1
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: similar to AA sequence:RefSeq:WP_019933467.1
COORDINATES: protein motif:HMM:NF019335.2
TonB-dependent receptor plug domain-containing protein
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: similar to AA sequence:RefSeq:WP_005896760.1
GO:0020037 - heme binding [Evidence IEA]
GO:0042167 - heme catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013412.2
COORDINATES: protein motif:HMM:TIGR04108.1
heme utilization cystosolic carrier protein HutX
COORDINATES: similar to AA sequence:RefSeq:WP_005360507.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
heme anaerobic degradation radical SAM methyltransferase ChuW/HutW
COORDINATES: protein motif:HMM:NF037015.2
COORDINATES: similar to AA sequence:RefSeq:WP_005331314.1
COORDINATES: similar to AA sequence:RefSeq:WP_017412559.1
COORDINATES: similar to AA sequence:RefSeq:WP_001135899.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879979.1
COORDINATES: similar to AA sequence:RefSeq:WP_005305951.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
PTS IIA-like nitrogen regulatory protein PtsN
COORDINATES: similar to AA sequence:RefSeq:WP_005891038.1
GO:0044238 - primary metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017766399.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004091254.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:TIGR03002.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0001530 - lipopolysaccharide binding [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
lipopolysaccharide transport periplasmic protein LptA
COORDINATES: protein motif:HMM:TIGR04409.1
GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
LPS export ABC transporter periplasmic protein LptC
COORDINATES: similar to AA sequence:RefSeq:WP_014291328.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
3-deoxy-manno-octulosonate-8-phosphatase KdsC
COORDINATES: similar to AA sequence:RefSeq:WP_005314421.1
GO:0016853 - isomerase activity [Evidence IEA]
KpsF/GutQ family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_019839104.1
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016352201.1
phospholipid ABC transporter ATP-binding protein MlaF
COORDINATES: similar to AA sequence:RefSeq:WP_011707619.1
lipid asymmetry maintenance ABC transporter permease subunit MlaE
COORDINATES: similar to AA sequence:RefSeq:WP_010675879.1
GO:0015914 - phospholipid transport [Evidence IEA]
outer membrane lipid asymmetry maintenance protein MlaD
COORDINATES: similar to AA sequence:RefSeq:WP_005349634.1
COORDINATES: protein motif:HMM:NF024857.2
COORDINATES: similar to AA sequence:RefSeq:WP_005306001.1
COORDINATES: similar to AA sequence:RefSeq:WP_005331316.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF022317.2
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF024950.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF018717.2
COORDINATES: protein motif:HMM:NF002938.0
GO:0018786 - haloalkane dehalogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014664.2
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:NF013188.2
GO:0005451 - monovalent cation:proton antiporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation:proton antiporter-2 (CPA2) family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014291438.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005331367.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0045152 - antisigma factor binding [Evidence IEA]; GO:0008236 - serine-type peptidase activity [Evidence IEA]
outer membrane-stress sensor serine endopeptidase DegS
COORDINATES: similar to AA sequence:RefSeq:WP_017412547.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF018049.2
COORDINATES: similar to AA sequence:RefSeq:WP_001192332.1
GO:0051301 - cell division [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1
COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1
COORDINATES: similar to AA sequence:RefSeq:WP_019935026.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012728651.1
ClpXP protease specificity-enhancing factor
COORDINATES: protein motif:HMM:NF013933.2
COORDINATES: similar to AA sequence:RefSeq:WP_005895759.1
COORDINATES: similar to AA sequence:RefSeq:WP_012548944.1
COORDINATES: similar to AA sequence:RefSeq:WP_005349680.1
GO:0006970 - response to osmotic stress [Evidence IEA]
division/outer membrane stress-associated lipid-binding lipoprotein
COORDINATES: similar to AA sequence:RefSeq:WP_005891102.1
COORDINATES: similar to AA sequence:RefSeq:WP_011707590.1
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016251.2
COORDINATES: similar to AA sequence:RefSeq:WP_005356638.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:NF021447.2
COORDINATES: similar to AA sequence:RefSeq:WP_005332092.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_015271715.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_005332094.1
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005314200.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:NF013396.2
COORDINATES: protein motif:HMM:TIGR01143.1
GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_005297383.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: similar to AA sequence:RefSeq:WP_013723409.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_005349708.1
COORDINATES: similar to AA sequence:RefSeq:WP_017409432.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014291364.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000130056.1
COORDINATES: protein motif:HMM:NF015739.2
COORDINATES: similar to AA sequence:RefSeq:WP_005891144.1
COORDINATES: similar to AA sequence:RefSeq:WP_005891146.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017412296.1
GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
UDP-3-O-acyl-N-acetylglucosamine deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_017412297.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019444787.1
GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001752018.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018740.2
COORDINATES: similar to AA sequence:RefSeq:WP_005349743.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005332122.1
COORDINATES: similar to AA sequence:RefSeq:WP_005349746.1
COORDINATES: similar to AA sequence:RefSeq:WP_017412899.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0009297 - pilus assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016352167.1
COORDINATES: similar to AA sequence:RefSeq:WP_017782448.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_015879629.1
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
COORDINATES: similar to AA sequence:RefSeq:WP_005349761.1
COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004738 - pyruvate dehydrogenase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring), homodimeric type
COORDINATES: similar to AA sequence:RefSeq:WP_005355085.1
GO:0045254 - pyruvate dehydrogenase complex [Evidence IEA]
GO:0004742 - dihydrolipoyllysine-residue acetyltransferase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010675812.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019604.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: similar to AA sequence:RefSeq:WP_081450071.1
glycine/sarcosine/betaine reductase complex selenoprotein A
COORDINATES: protein motif:HMM:NF040746.1
glycine/sarcosine/betaine reductase complex component C subunit beta
COORDINATES: protein motif:HMM:NF040747.1
glycine/sarcosine/betaine reductase complex component C subunit alpha
COORDINATES: protein motif:HMM:NF020896.2
glycine/sarcosine/betaine reductase component B subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010957155.1
glycine/betaine/sarcosine/D-proline family reductase selenoprotein B
COORDINATES: protein motif:HMM:NF038093.1
COORDINATES: protein motif:HMM:TIGR00475.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
COORDINATES: similar to AA sequence:RefSeq:WP_003920552.1
H-NS family nucleoid-associated regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_005908467.1
GO:0016746 - acyltransferase activity [Evidence IEA]
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005896719.1
COORDINATES: similar to AA sequence:RefSeq:WP_011906133.1
COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1
cAMP-activated global transcriptional regulator CRP
COORDINATES: similar to AA sequence:RefSeq:WP_019933387.1
COORDINATES: similar to AA sequence:RefSeq:WP_005350433.1
COORDINATES: similar to AA sequence:RefSeq:WP_011707380.1
COORDINATES: protein motif:HMM:NF021072.2
YheV family putative metal-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012729083.1
COORDINATES: protein motif:HMM:NF016330.2
COORDINATES: similar to AA sequence:RefSeq:WP_005893499.1
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: similar to AA sequence:RefSeq:WP_005324644.1
bifunctional helix-turn-helix transcriptional regulator/GNAT family N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015879200.1
COORDINATES: similar to AA sequence:RefSeq:WP_017408776.1
COORDINATES: similar to AA sequence:RefSeq:WP_019935276.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: protein motif:HMM:NF015077.2
COORDINATES: similar to AA sequence:RefSeq:WP_001705373.1
COORDINATES: similar to AA sequence:RefSeq:WP_005901659.1
GO:0008797 - aspartate ammonia-lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016102.2
COORDINATES: similar to AA sequence:RefSeq:WP_005349095.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005309514.1
COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR04416.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: protein motif:HMM:NF013964.2
HNH endonuclease signature motif containing protein
COORDINATES: protein motif:HMM:NF013132.2
GO:0008509 - anion transmembrane transporter activity [Evidence IEA]
GO:0006820 - anion transport [Evidence IEA]
DASS family sodium-coupled anion symporter
COORDINATES: protein motif:HMM:NF013989.2
COORDINATES: protein motif:HMM:TIGR01995.1
GO:0015573 - beta-glucoside transmembrane transporter activity [Evidence IEA]
GO:0015759 - beta-glucoside transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
beta-glucoside-specific PTS transporter subunit IIABC
COORDINATES: similar to AA sequence:RefSeq:WP_015878568.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014293312.1
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: protein motif:HMM:NF024547.2
COORDINATES: similar to AA sequence:RefSeq:WP_001065343.1
COORDINATES: similar to AA sequence:RefSeq:WP_017045299.1
COORDINATES: protein motif:HMM:NF014442.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019933347.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF015859.2
COORDINATES: similar to AA sequence:RefSeq:WP_005305474.1
late competence development ComFB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005345987.1
COORDINATES: similar to AA sequence:RefSeq:WP_010675755.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005895033.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008990 - rRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC
COORDINATES: protein motif:HMM:NF023301.2
murein transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014291398.1
GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012863.2
COORDINATES: protein motif:HMM:TIGR01084.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020379602.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_005350736.1
GO:0004359 - glutaminase activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_017410627.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012729188.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_014293558.1
COORDINATES: similar to AA sequence:RefSeq:WP_012729190.1
COORDINATES: similar to AA sequence:RefSeq:WP_011707387.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000997795.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_005320466.1
type IV pilus twitching motility protein PilT
COORDINATES: similar to AA sequence:RefSeq:WP_005320465.1
GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00924.1
GO:0015333 - peptide:proton symporter activity [Evidence IEA]
GO:0015833 - peptide transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012729195.1
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: similar to AA sequence:RefSeq:WP_011707730.1
COORDINATES: similar to AA sequence:RefSeq:WP_016352287.1
GO:0004071 - aspartate-ammonia ligase activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019933108.1
GO:0003724 - RNA helicase activity [Evidence IEA]
GO:0000027 - ribosomal large subunit assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019445730.1
COORDINATES: similar to AA sequence:RefSeq:WP_010636175.1
GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid transport system II carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_005320459.1
COORDINATES: similar to AA sequence:RefSeq:WP_005895414.1
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019445729.1
COORDINATES: protein motif:HMM:NF016895.2
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005894688.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: protein motif:HMM:NF016101.2
COORDINATES: protein motif:HMM:NF024211.2
COORDINATES: protein motif:HMM:NF022101.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010673117.1
COORDINATES: protein motif:HMM:NF012792.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: protein motif:HMM:NF014218.2
COORDINATES: protein motif:HMM:NF022179.2
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011705314.1
COORDINATES: similar to AA sequence:RefSeq:WP_019933112.1
GO:0009009 - site-specific recombinase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005348584.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:NF025605.2
COORDINATES: protein motif:HMM:NF019874.2
COORDINATES: similar to AA sequence:RefSeq:WP_011707133.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005358433.1
COORDINATES: protein motif:HMM:NF017840.2
COORDINATES: protein motif:HMM:TIGR01806.1
COORDINATES: protein motif:HMM:NF040398.1
COORDINATES: similar to AA sequence:RefSeq:WP_005360602.1
GO:0000034 - adenine deaminase activity [Evidence IEA]
GO:0006146 - adenine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014293110.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF015927.2
COORDINATES: protein motif:HMM:NF008292.0
GO:0008882 - [glutamate-ammonia-ligase] adenylyltransferase activity [Evidence IEA]
bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
COORDINATES: protein motif:HMM:NF012548.2
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: similar to AA sequence:RefSeq:WP_019933086.1
LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019000234.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0005975 - carbohydrate metabolic process [Evidence IEA]
bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
COORDINATES: protein motif:HMM:TIGR01488.1
COORDINATES: protein motif:HMM:TIGR02481.1
COORDINATES: similar to AA sequence:RefSeq:WP_005340949.1
COORDINATES: similar to AA sequence:RefSeq:WP_005902662.1
COORDINATES: protein motif:HMM:NF007110.0
GO:0005542 - folic acid binding [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005335417.1
succinate dehydrogenase assembly factor 2
COORDINATES: similar to AA sequence:RefSeq:WP_005346487.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000003307.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011704744.1
GO:0016989 - sigma factor antagonist activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015825.2
MucB/RseB C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014204436.1
COORDINATES: similar to AA sequence:RefSeq:WP_004104575.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011704749.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011704750.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017786467.1
COORDINATES: similar to AA sequence:RefSeq:WP_009143342.1
GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005357210.1
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: similar to AA sequence:RefSeq:WP_017781559.1
COORDINATES: similar to AA sequence:RefSeq:WP_005336092.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]
GO:0043039 - tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00697.1
GO:1990397 - queuosine salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_043851824.1
COORDINATES: similar to AA sequence:RefSeq:WP_041412878.1
COORDINATES: similar to AA sequence:RefSeq:WP_010675633.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
two-component sensor histidine kinase BarA
COORDINATES: protein motif:HMM:NF009639.0
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_005309420.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879786.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_015879785.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016960285.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: protein motif:HMM:NF013213.2
COORDINATES: similar to AA sequence:RefSeq:WP_005305106.1
COORDINATES: similar to AA sequence:RefSeq:WP_011707413.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010673029.1
GO:0009032 - thymidine phosphorylase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017412832.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008913258.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011705812.1
GO:0015499 - formate transmembrane transporter activity [Evidence IEA]
GO:0015724 - formate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000712658.1
YgiW/YdeI family stress tolerance OB fold protein
COORDINATES: protein motif:HMM:NF025116.2
COORDINATES: protein motif:HMM:NF023268.2
COORDINATES: protein motif:HMM:TIGR00129.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: similar to AA sequence:RefSeq:WP_017778900.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019839254.1
COORDINATES: similar to AA sequence:RefSeq:WP_005315173.1
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF005086.0
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017408180.1
respiratory chain complex I subunit 1 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000429104.1
COORDINATES: protein motif:HMM:NF008556.0
COORDINATES: protein motif:HMM:NF005044.0
COORDINATES: similar to AA sequence:RefSeq:WP_001288122.1
COORDINATES: similar to AA sequence:RefSeq:WP_005351513.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
formate hydrogenlyase complex iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005360200.1
NADH-quinone oxidoreductase subunit B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016350983.1
formate hydrogenlyase maturation protein HycH
COORDINATES: similar to AA sequence:RefSeq:WP_017408176.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005351580.1
COORDINATES: similar to AA sequence:RefSeq:WP_005303930.1
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025885.2
COORDINATES: protein motif:HMM:NF015277.2
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: protein motif:HMM:NF024247.2
COORDINATES: similar to AA sequence:RefSeq:WP_011898652.1
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: similar to AA sequence:RefSeq:WP_005325528.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005309891.1
molybdenum cofactor biosynthesis protein B
COORDINATES: similar to AA sequence:RefSeq:WP_019935744.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: similar to AA sequence:RefSeq:WP_000598616.1
molybdopterin synthase sulfur carrier subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010674163.1
molybdopterin synthase catalytic subunit MoaE
COORDINATES: protein motif:HMM:NF018894.2
COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1
COORDINATES: protein motif:HMM:NF013358.2
COORDINATES: similar to AA sequence:RefSeq:WP_011707404.1
COORDINATES: similar to AA sequence:RefSeq:WP_005340483.1
COORDINATES: similar to AA sequence:RefSeq:WP_005347383.1
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF008652.0
COORDINATES: similar to AA sequence:RefSeq:WP_010672800.1
COORDINATES: similar to AA sequence:RefSeq:WP_005313832.1
COORDINATES: similar to AA sequence:RefSeq:WP_005313807.1
COORDINATES: similar to AA sequence:RefSeq:WP_010672811.1
COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1
COORDINATES: protein motif:HMM:NF015999.2
COORDINATES: similar to AA sequence:RefSeq:WP_010635007.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017412519.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011532564.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013695.2
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001295383.1
COORDINATES: similar to AA sequence:RefSeq:WP_017764129.1
GO:0043872 - lysine:cadaverine antiporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF007540.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
lysine decarboxylation/transport transcriptional activator CadC
COORDINATES: similar to AA sequence:RefSeq:WP_001530439.1
COORDINATES: protein motif:HMM:NF015871.2
COORDINATES: protein motif:HMM:NF002805.0
sugar isomerase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015878901.1
COORDINATES: similar to AA sequence:RefSeq:WP_017765290.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0008941 - nitric oxide dioxygenase activity [Evidence IEA]; GO:0019825 - oxygen binding [Evidence IEA]
GO:0051409 - response to nitrosative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005899214.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019001772.1
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
major facilitator superfamily transporter
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:TIGR00143.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00100.1
GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: protein motif:HMM:TIGR00073.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: protein motif:HMM:TIGR00074.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: protein motif:HMM:TIGR00075.1
GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011516280.1
hydrogenase expression/formation protein HypE
COORDINATES: similar to AA sequence:RefSeq:WP_011516281.1
COORDINATES: similar to AA sequence:RefSeq:WP_005342946.1
MerR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016290574.1
COORDINATES: similar to AA sequence:RefSeq:WP_005316116.1
GO:0008899 - homoserine O-succinyltransferase activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024491.2
phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein
COORDINATES: protein motif:HMM:NF014626.2
GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]
SOS response-associated peptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019446580.1
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: protein motif:HMM:NF017273.2
COORDINATES: protein motif:HMM:NF015549.2
COORDINATES: protein motif:HMM:NF019947.2
COORDINATES: protein motif:HMM:NF024825.2
COORDINATES: protein motif:HMM:TIGR00072.1
COORDINATES: protein motif:HMM:NF012592.2
COORDINATES: protein motif:HMM:NF013242.2
COORDINATES: protein motif:HMM:NF012402.2
COORDINATES: protein motif:HMM:NF028488.2
COORDINATES: similar to AA sequence:RefSeq:WP_005349991.1
COORDINATES: similar to AA sequence:RefSeq:WP_005335825.1
COORDINATES: similar to AA sequence:RefSeq:WP_005902502.1
COORDINATES: protein motif:HMM:NF021364.2
putative DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF016970.2
COORDINATES: similar to AA sequence:RefSeq:WP_005303240.1
COORDINATES: similar to AA sequence:RefSeq:WP_005475027.1
COORDINATES: protein motif:HMM:NF015669.2
COORDINATES: protein motif:HMM:NF012706.2
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019840680.1
GO:0008788 - alpha,alpha-phosphotrehalase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012873.2
COORDINATES: protein motif:HMM:TIGR01733.1
amino acid adenylation domain-containing protein
COORDINATES: protein motif:HMM:NF012759.2
COORDINATES: protein motif:HMM:NF012901.2
COORDINATES: protein motif:HMM:NF026115.2
polyketide synthase dehydratase domain-containing protein
DHA2 family efflux MFS transporter permease subunit
COORDINATES: protein motif:HMM:NF027890.2
COORDINATES: protein motif:HMM:TIGR01990.1
GO:0008801 - beta-phosphoglucomutase activity [Evidence IEA]
GO:0046352 - disaccharide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015592.2
COORDINATES: similar to AA sequence:RefSeq:WP_005323487.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]; GO:0015574 - trehalose transmembrane transporter activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0015771 - trehalose transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF023277.2
COORDINATES: similar to AA sequence:RefSeq:WP_012728395.1
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF021376.2
COORDINATES: protein motif:HMM:NF010182.0
ECF-type riboflavin transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF010167.0
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_017410006.1
COORDINATES: protein motif:HMM:NF022526.2
COORDINATES: similar to AA sequence:RefSeq:WP_001280837.1
COORDINATES: protein motif:HMM:NF024863.2
GDSL-type esterase/lipase family protein
COORDINATES: protein motif:HMM:NF019401.2
COORDINATES: similar to AA sequence:RefSeq:WP_005306028.1
COORDINATES: similar to AA sequence:RefSeq:WP_005120526.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0006098 - pentose-phosphate shunt [Evidence IEA]
GO:0051119 - sugar transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: protein motif:HMM:NF024732.2
COORDINATES: protein motif:HMM:NF014594.2
COORDINATES: protein motif:HMM:NF012907.2
COORDINATES: similar to AA sequence:RefSeq:WP_000275365.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012354.2
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000494484.1
COORDINATES: protein motif:HMM:NF024952.2
COORDINATES: similar to AA sequence:RefSeq:WP_010635350.1
GO:0003993 - acid phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024169.2
COORDINATES: protein motif:HMM:NF014582.2
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF014385.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:TIGR00710.1
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: similar to AA sequence:RefSeq:WP_005894260.1
COORDINATES: protein motif:HMM:NF013543.2
COORDINATES: similar to AA sequence:RefSeq:WP_000048924.1
COORDINATES: similar to AA sequence:RefSeq:WP_012729054.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014292764.1
COORDINATES: similar to AA sequence:RefSeq:WP_005348531.1
COORDINATES: similar to AA sequence:RefSeq:WP_005460020.1
COORDINATES: protein motif:HMM:NF024057.2
COORDINATES: similar to AA sequence:RefSeq:WP_011906920.1
D-galactonate dehydratase family protein
COORDINATES: protein motif:HMM:NF028485.2
COORDINATES: protein motif:HMM:NF016982.2
COORDINATES: protein motif:HMM:NF019950.2
COORDINATES: protein motif:HMM:TIGR04337.1
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: protein motif:HMM:TIGR04336.1
COORDINATES: protein motif:HMM:TIGR04335.1
COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005350061.1
phosphoenolpyruvate-protein phosphotransferase PtsI
COORDINATES: similar to AA sequence:RefSeq:WP_005338266.1
COORDINATES: protein motif:HMM:NF020130.2
COORDINATES: similar to AA sequence:RefSeq:WP_005350984.1
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: similar to AA sequence:RefSeq:WP_005900938.1
COORDINATES: similar to AA sequence:RefSeq:WP_005329276.1
COORDINATES: protein motif:HMM:NF023419.2
COORDINATES: similar to AA sequence:RefSeq:WP_005303756.1
COORDINATES: protein motif:HMM:NF014066.2
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: protein motif:HMM:NF028277.2
TcfC E-set like domain-containing protein
COORDINATES: protein motif:HMM:NF027764.2
COORDINATES: protein motif:HMM:NF024039.2
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: protein motif:HMM:NF023154.2
COORDINATES: protein motif:HMM:NF012464.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012729436.1
type I restriction-modification system subunit M
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012729438.1
COORDINATES: protein motif:HMM:NF016232.2
COORDINATES: protein motif:HMM:NF023295.2
type I restriction endonuclease subunit R
COORDINATES: protein motif:HMM:NF021873.2
COORDINATES: protein motif:HMM:NF026165.2
(deoxy)nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011705516.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF027853.2
COORDINATES: protein motif:HMM:NF036774.2
COORDINATES: similar to AA sequence:RefSeq:WP_005896974.1
COORDINATES: protein motif:HMM:NF016985.2
COORDINATES: protein motif:HMM:TIGR03824.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: protein motif:HMM:TIGR03170.1
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
flagellar basal body P-ring formation chaperone FlgA
COORDINATES: similar to AA sequence:RefSeq:WP_005302769.1
COORDINATES: similar to AA sequence:RefSeq:WP_005894521.1
protein-glutamate O-methyltransferase CheR
COORDINATES: similar to AA sequence:RefSeq:WP_017782324.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019933520.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014293175.1
COORDINATES: similar to AA sequence:RefSeq:WP_005334163.1
flagellar hook-basal body complex protein
COORDINATES: similar to AA sequence:RefSeq:WP_005344529.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017782326.1
COORDINATES: similar to AA sequence:RefSeq:WP_005314259.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014293171.1
GO:0009427 - bacterial-type flagellum basal body, distal rod, L ring [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
flagellar basal body L-ring protein FlgH
COORDINATES: similar to AA sequence:RefSeq:WP_014293259.1
flagellar basal body P-ring protein FlgI
COORDINATES: similar to AA sequence:RefSeq:WP_005894497.1
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
flagellar assembly peptidoglycan hydrolase FlgJ
COORDINATES: protein motif:HMM:TIGR02492.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02550.1
COORDINATES: protein motif:HMM:NF012874.2
COORDINATES: similar to AA sequence:RefSeq:WP_065403103.1
COORDINATES: protein motif:HMM:NF015602.2
COORDINATES: protein motif:HMM:NF018852.2
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: protein motif:HMM:NF040131.1
COORDINATES: similar to AA sequence:RefSeq:WP_002786732.1
COORDINATES: protein motif:HMM:TIGR04181.1
COORDINATES: protein motif:HMM:TIGR03568.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0006047 - UDP-N-acetylglucosamine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012695.2
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: similar to AA sequence:RefSeq:WP_005350289.1
acylneuraminate cytidylyltransferase family protein
COORDINATES: protein motif:HMM:TIGR03573.1
COORDINATES: protein motif:HMM:NF013168.2
imidazole glycerol phosphate synthase cyclase subunit
COORDINATES: protein motif:HMM:TIGR01855.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_002864265.1
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016228.2
COORDINATES: protein motif:HMM:NF009402.0
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF014625.2
COORDINATES: similar to AA sequence:RefSeq:WP_005306738.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03590.1
GO:0016758 - hexosyltransferase activity [Evidence IEA]
UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_014975890.1
GO:0070567 - cytidylyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011707809.1
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_005358990.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting)
COORDINATES: protein motif:HMM:TIGR00208.1
COORDINATES: similar to AA sequence:RefSeq:WP_017409846.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005334126.1
COORDINATES: similar to AA sequence:RefSeq:WP_019838846.1
COORDINATES: similar to AA sequence:RefSeq:WP_000503164.1
COORDINATES: similar to AA sequence:RefSeq:WP_011705271.1
flagellar hook-basal body complex protein FliE
COORDINATES: similar to AA sequence:RefSeq:WP_005343951.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: similar to AA sequence:RefSeq:WP_005356571.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF004270.2
COORDINATES: similar to AA sequence:RefSeq:WP_017778743.1
COORDINATES: protein motif:HMM:TIGR02473.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: protein motif:HMM:NF004285.1
flagellar basal body-associated protein FliL
COORDINATES: similar to AA sequence:RefSeq:WP_005298775.1
COORDINATES: similar to AA sequence:RefSeq:WP_010673924.1
COORDINATES: protein motif:HMM:NF016250.2
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019001237.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: similar to AA sequence:RefSeq:WP_003214552.1
COORDINATES: similar to AA sequence:RefSeq:WP_019933566.1
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017766597.1
COORDINATES: similar to AA sequence:RefSeq:WP_005357643.1
COORDINATES: similar to AA sequence:RefSeq:WP_005353674.1
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]; GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011705287.1
COORDINATES: similar to AA sequence:RefSeq:WP_019001101.1
COORDINATES: similar to AA sequence:RefSeq:WP_005357654.1
COORDINATES: similar to AA sequence:RefSeq:WP_005319293.1
COORDINATES: similar to AA sequence:RefSeq:WP_017781147.1
COORDINATES: similar to AA sequence:RefSeq:WP_011705291.1
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: similar to AA sequence:RefSeq:WP_017788566.1
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: similar to AA sequence:RefSeq:WP_005334696.1
COORDINATES: similar to AA sequence:RefSeq:WP_005298828.1
COORDINATES: similar to AA sequence:RefSeq:WP_005343991.1
COORDINATES: similar to AA sequence:RefSeq:WP_005298839.1
COORDINATES: similar to AA sequence:RefSeq:WP_005352418.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879735.1
GO:0004067 - asparaginase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015879734.1
GO:0008233 - peptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010675416.1
COORDINATES: similar to AA sequence:RefSeq:WP_005346717.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003859733.1
GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
COORDINATES: similar to AA sequence:RefSeq:WP_005313097.1
carboxy-S-adenosyl-L-methionine synthase CmoA
COORDINATES: similar to AA sequence:RefSeq:WP_005346888.1
COORDINATES: similar to AA sequence:RefSeq:WP_019936135.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005346893.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014292967.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_010672867.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_005313309.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_017765795.1
COORDINATES: protein motif:HMM:NF019781.2
cytochrome bd oxidase small subunit, CydX/CbdX family
COORDINATES: protein motif:HMM:NF021140.2
COORDINATES: protein motif:HMM:TIGR02799.1
GO:0047617 - acyl-CoA hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
tol-pal system-associated acyl-CoA thioesterase
COORDINATES: similar to AA sequence:RefSeq:WP_011707366.1
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014292962.1
GO:0098567 - periplasmic side of plasma membrane [Evidence IEA]
GO:0061024 - membrane organization [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02794.1
COORDINATES: similar to AA sequence:RefSeq:WP_005313285.1
Tol-Pal system beta propeller repeat protein TolB
COORDINATES: similar to AA sequence:RefSeq:WP_010672877.1
GO:0009279 - cell outer membrane [Evidence IEA]
peptidoglycan-associated lipoprotein Pal
COORDINATES: protein motif:HMM:TIGR02795.1
COORDINATES: similar to AA sequence:RefSeq:WP_014292957.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010672881.1
COORDINATES: similar to AA sequence:RefSeq:WP_017411659.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_010455085.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010455091.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017411656.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005352421.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_010635295.1
COORDINATES: protein motif:HMM:NF022653.2
COORDINATES: similar to AA sequence:RefSeq:WP_010673953.1
COORDINATES: similar to AA sequence:RefSeq:WP_005335395.1
COORDINATES: similar to AA sequence:RefSeq:WP_010633640.1
GO:0097573 - glutathione oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014200.2
GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_017778826.1
COORDINATES: similar to AA sequence:RefSeq:WP_017782978.1
trans-2-enoyl-CoA reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019840434.1
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005361569.1
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01528.1
GO:0015663 - nicotinamide mononucleotide transmembrane transporter activity [Evidence IEA]
GO:0015890 - nicotinamide mononucleotide transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF020965.2
COORDINATES: similar to AA sequence:RefSeq:WP_005349961.1
GO:0042908 - xenobiotic transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013723557.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010673523.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013488.2
COORDINATES: similar to AA sequence:RefSeq:WP_014293091.1
tRNA 5-hydroxyuridine modification protein YegQ
COORDINATES: similar to AA sequence:RefSeq:WP_017787727.1
COORDINATES: similar to AA sequence:RefSeq:WP_003856790.1
COORDINATES: similar to AA sequence:RefSeq:WP_008643202.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005349045.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014291632.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_008092354.1
COORDINATES: similar to AA sequence:RefSeq:WP_014291634.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: similar to AA sequence:RefSeq:WP_010456610.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014291643.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_017411996.1
GO:0009030 - thiamine-phosphate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014447.2
COORDINATES: similar to AA sequence:RefSeq:WP_005302076.1
COORDINATES: protein motif:HMM:TIGR03696.1
COORDINATES: protein motif:HMM:NF008299.0
COORDINATES: similar to AA sequence:RefSeq:WP_004754423.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020312473.1
GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase
COORDINATES: protein motif:HMM:NF025418.2
COORDINATES: protein motif:HMM:NF018010.2
COORDINATES: protein motif:HMM:NF014732.2
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
Wzz/FepE/Etk N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: similar to AA sequence:RefSeq:WP_000459062.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611885.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_005349952.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017411892.1
COORDINATES: similar to AA sequence:RefSeq:WP_019445290.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_005349949.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000270412.1
COORDINATES: similar to AA sequence:RefSeq:WP_019935572.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014293020.1
HI0074 family nucleotidyltransferase substrate-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014293021.1
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010675538.1
COORDINATES: similar to AA sequence:RefSeq:WP_002452576.1
COORDINATES: similar to AA sequence:RefSeq:WP_012519136.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: protein motif:HMM:NF024245.2
helix-hairpin-helix domain-containing protein
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: similar to AA sequence:RefSeq:WP_014292985.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019001198.1
COORDINATES: similar to AA sequence:RefSeq:WP_010673696.1
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]; GO:0004640 - phosphoribosylanthranilate isomerase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF
COORDINATES: similar to AA sequence:RefSeq:WP_019935609.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017786292.1
COORDINATES: similar to AA sequence:RefSeq:WP_005898670.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006421.0
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]; GO:0046417 - chorismate metabolic process [Evidence IEA]
bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: similar to AA sequence:RefSeq:WP_005350226.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005319125.1
COORDINATES: similar to AA sequence:RefSeq:WP_005350230.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011706718.1
GO:0001522 - pseudouridine synthesis [Evidence IEA]
23S rRNA pseudouridine(2605) synthase RluB
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_017374784.1
GO:0003951 - NAD+ kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011706782.1
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005357196.1
COORDINATES: similar to AA sequence:RefSeq:WP_011706780.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: protein motif:HMM:NF027798.2
COORDINATES: similar to AA sequence:RefSeq:WP_004990637.1
GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO:0006523 - alanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011707282.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005313192.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005329042.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: similar to AA sequence:RefSeq:WP_005350555.1
GO:0004652 - polynucleotide adenylyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006378 - mRNA polyadenylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011707278.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934447.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005897852.1
COORDINATES: protein motif:HMM:NF013106.2
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:NF013842.2
COORDINATES: similar to AA sequence:RefSeq:WP_010890848.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02429.1
COORDINATES: similar to AA sequence:RefSeq:WP_000786547.1
COORDINATES: protein motif:HMM:NF016125.2
GO:0004411 - homogentisate 1,2-dioxygenase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006570 - tyrosine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01263.1
GO:0003868 - 4-hydroxyphenylpyruvate dioxygenase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019933239.1
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:NF012434.2
COORDINATES: similar to AA sequence:RefSeq:WP_017412906.1
GO:0016034 - maleylacetoacetate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005325326.1
GO:0004505 - phenylalanine 4-monooxygenase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005310774.1
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_014293360.1
COORDINATES: protein motif:HMM:NF008576.0
DNA-binding transcriptional regulator CsiR
COORDINATES: protein motif:HMM:NF020515.2
GO:0005506 - iron ion binding [Evidence IEA]; GO:0050498 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014291193.1
COORDINATES: similar to AA sequence:RefSeq:WP_009565301.1
COORDINATES: similar to AA sequence:RefSeq:WP_012297382.1
zinc-binding alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_001014314.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014639.2
COORDINATES: protein motif:HMM:NF039621.1
COORDINATES: protein motif:HMM:NF015444.2
COORDINATES: protein motif:HMM:TIGR01891.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025091.2
isocitrate lyase/PEP mutase family protein
COORDINATES: protein motif:HMM:NF001614.1
aconitase/3-isopropylmalate dehydratase large subunit family protein
COORDINATES: protein motif:HMM:TIGR02087.1
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:NF013329.2
COORDINATES: protein motif:HMM:NF019013.2
GO:0030638 - polyketide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: similar to AA sequence:RefSeq:WP_008784969.1
DsrE/DsrF/TusD sulfur relay family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011705344.1
COORDINATES: similar to AA sequence:RefSeq:WP_005357232.1
COORDINATES: similar to AA sequence:RefSeq:WP_011898937.1
outer membrane protein assembly factor BamE
COORDINATES: similar to AA sequence:RefSeq:YP_005224472.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03718.1
COORDINATES: protein motif:HMM:NF012377.2
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005363085.1
COORDINATES: similar to AA sequence:RefSeq:WP_005348361.1
GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014291685.1
COORDINATES: similar to AA sequence:RefSeq:WP_005317860.1
GO:0000310 - xanthine phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019444904.1
COORDINATES: protein motif:HMM:NF008686.0
cyclopropane fatty acyl phospholipid synthase
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010673312.1
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF01859
Phe leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005350035.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: protein motif:HMM:NF013618.2
COORDINATES: similar to AA sequence:RefSeq:WP_019001122.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005350022.1
COORDINATES: protein motif:HMM:NF003840.0
endonuclease/exonuclease/phosphatase family protein
LysM peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010674136.1
GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IEA]
GO:0019243 - methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016350242.1
COORDINATES: similar to AA sequence:RefSeq:WP_017413044.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005893858.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03503.1
COORDINATES: similar to AA sequence:RefSeq:WP_005299285.1
COORDINATES: similar to AA sequence:RefSeq:WP_010674142.1
GO:0008968 - D-sedoheptulose 7-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011706624.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005302746.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_005457783.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021367.2
COORDINATES: similar to AA sequence:RefSeq:WP_001307333.1
COORDINATES: similar to AA sequence:RefSeq:WP_016350324.1
COORDINATES: similar to AA sequence:RefSeq:WP_010674258.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005299611.1
COORDINATES: similar to AA sequence:RefSeq:WP_005298668.1
COORDINATES: protein motif:HMM:NF019845.2
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF013798.2
COORDINATES: similar to AA sequence:RefSeq:WP_019933400.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_005309562.1
COORDINATES: similar to AA sequence:RefSeq:WP_017412892.1
DnaT-like ssDNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017780974.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: similar to AA sequence:RefSeq:WP_017764148.1
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0000103 - sulfate assimilation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014516.2
COORDINATES: similar to AA sequence:RefSeq:WP_005348347.1
GO:0000917 - division septum assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005342774.1
COORDINATES: protein motif:HMM:NF014437.2
COORDINATES: protein motif:HMM:NF016701.2
COORDINATES: protein motif:HMM:NF025594.2
COORDINATES: similar to AA sequence:RefSeq:WP_004698872.1
RNA recognition motif containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014293154.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF021360.2
COORDINATES: protein motif:HMM:NF012257.2
cyclic nucleotide-binding domain-containing protein
GO:0015299 - solute:proton antiporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017408267.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005334934.1
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012729123.1
COORDINATES: similar to AA sequence:RefSeq:WP_012729124.1
COORDINATES: similar to AA sequence:RefSeq:WP_015880108.1
GO:0004801 - transaldolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011071244.1
COORDINATES: protein motif:HMM:NF012616.2
COORDINATES: protein motif:HMM:NF001208.0
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010674065.1
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_012729322.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017783433.1
GO:0008710 - 8-amino-7-oxononanoate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02072.1
GO:0008171 - O-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014292284.1
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010674070.1
COORDINATES: protein motif:HMM:NF014427.2
COORDINATES: protein motif:HMM:NF015568.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF014868.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014292736.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
ribonucleotide-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011706177.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
class I ribonucleotide reductase maintenance protein YfaE
COORDINATES: similar to AA sequence:RefSeq:WP_011898934.1
COORDINATES: protein motif:HMM:NF002074.0
GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
GO:0019538 - protein metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010634812.1
COORDINATES: similar to AA sequence:RefSeq:WP_005349101.1
COORDINATES: similar to AA sequence:RefSeq:WP_005311958.1
YajQ family cyclic di-GMP-binding protein
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: similar to AA sequence:RefSeq:WP_019934489.1
COORDINATES: similar to AA sequence:RefSeq:WP_017779274.1
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014291849.1
COORDINATES: protein motif:HMM:NF013283.2
autotransporter assembly complex protein TamA
COORDINATES: protein motif:HMM:NF016260.2
translocation/assembly module TamB domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005361531.1
COORDINATES: similar to AA sequence:RefSeq:WP_005317553.1
COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1
ribosome assembly RNA-binding protein YhbY
COORDINATES: similar to AA sequence:RefSeq:WP_005903962.1
GO:0016436 - rRNA (uridine) methyltransferase activity [Evidence IEA]
GO:0001510 - RNA methylation [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]
23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
COORDINATES: protein motif:HMM:NF008004.0
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019445921.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019001284.1
GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005317530.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879314.1
GO:0042274 - ribosomal small subunit biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011707075.1
COORDINATES: similar to AA sequence:RefSeq:WP_005349547.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014291937.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015879310.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1
COORDINATES: similar to AA sequence:RefSeq:WP_017783738.1
COORDINATES: similar to AA sequence:RefSeq:WP_019839515.1
COORDINATES: similar to AA sequence:RefSeq:WP_019445928.1
COORDINATES: similar to AA sequence:RefSeq:WP_014291649.1
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: protein motif:HMM:NF013117.2
COORDINATES: protein motif:HMM:NF014126.2
GO:0071705 - nitrogen compound transport [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF016513.2
COORDINATES: similar to AA sequence:RefSeq:WP_015879308.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017411954.1
COORDINATES: protein motif:HMM:NF015803.2
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: similar to AA sequence:RefSeq:WP_003092845.1
GO:0008934 - inositol monophosphate 1-phosphatase activity [Evidence IEA]
GO:0046855 - inositol phosphate dephosphorylation [Evidence IEA]; GO:0046854 - phosphatidylinositol phosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: protein motif:HMM:NF017870.2
COORDINATES: protein motif:HMM:NF012783.2
ATP-dependent Clp protease proteolytic subunit
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: similar to AA sequence:RefSeq:WP_019934338.1
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF023299.2
COORDINATES: similar to AA sequence:RefSeq:WP_005337680.1
GO:0004022 - alcohol dehydrogenase (NAD+) activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006066 - alcohol metabolic process [Evidence IEA]; GO:0015976 - carbon utilization [Evidence IEA]
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_011898616.1
COORDINATES: similar to AA sequence:RefSeq:WP_005314827.1
oligopeptide ABC transporter permease OppB
COORDINATES: similar to AA sequence:RefSeq:WP_011706428.1
oligopeptide ABC transporter permease OppC
COORDINATES: similar to AA sequence:RefSeq:WP_005337668.1
oligopeptide ABC transporter ATP-binding protein OppD
COORDINATES: similar to AA sequence:RefSeq:WP_017411563.1
murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
COORDINATES: similar to AA sequence:RefSeq:WP_005342407.1
COORDINATES: protein motif:HMM:NF016278.2
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
GO:0070475 - rRNA base methylation [Evidence IEA]
23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ
COORDINATES: protein motif:HMM:NF002759.0
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: protein motif:HMM:NF023580.2
COORDINATES: similar to AA sequence:RefSeq:WP_005331480.1
GO:0019829 - ATPase-coupled cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]
zinc/cadmium/mercury/lead-transporting ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_019933426.1
COORDINATES: similar to AA sequence:RefSeq:WP_005334167.1
COORDINATES: protein motif:HMM:NF025230.2
COORDINATES: protein motif:HMM:NF004238.1
COORDINATES: protein motif:HMM:NF009280.2
COORDINATES: similar to AA sequence:RefSeq:WP_017409407.1
COORDINATES: protein motif:HMM:NF014206.2
COORDINATES: protein motif:HMM:NF021638.2
COORDINATES: protein motif:HMM:TIGR03818.1
COORDINATES: protein motif:HMM:NF005413.0
COORDINATES: protein motif:HMM:NF015693.2
flagellar basal body-associated FliL family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005334660.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0006567 - threonine catabolic process [Evidence IEA]
bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB
COORDINATES: similar to AA sequence:RefSeq:WP_019444738.1
COORDINATES: similar to AA sequence:RefSeq:WP_019444739.1
GO:0016301 - kinase activity [Evidence IEA]
GO:0006082 - organic acid metabolic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000861734.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_060587380.1
COORDINATES: protein motif:HMM:TIGR00328.1
COORDINATES: protein motif:HMM:TIGR01400.1
COORDINATES: similar to AA sequence:RefSeq:WP_003155633.1
COORDINATES: similar to AA sequence:RefSeq:WP_005305852.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013236.2
FliM/FliN family flagellar motor switch protein
COORDINATES: protein motif:HMM:NF037805.2
COORDINATES: similar to AA sequence:RefSeq:WP_019444825.1
COORDINATES: protein motif:HMM:TIGR00205.1
COORDINATES: protein motif:HMM:TIGR00206.1
COORDINATES: protein motif:HMM:NF013838.2
COORDINATES: protein motif:HMM:NF014196.2
COORDINATES: similar to AA sequence:RefSeq:WP_014293271.1
COORDINATES: protein motif:HMM:NF014144.2
COORDINATES: similar to AA sequence:RefSeq:WP_008284553.1
COORDINATES: protein motif:HMM:NF028458.2
COORDINATES: protein motif:HMM:NF016292.2
ABC transporter substrate binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011705790.1
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
anaerobic C4-dicarboxylate transporter DcuC
COORDINATES: similar to AA sequence:RefSeq:WP_005894348.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934834.1
dicarboxylate/amino acid:cation symporter
COORDINATES: protein motif:HMM:NF016224.2
COORDINATES: protein motif:HMM:TIGR01620.2
COORDINATES: protein motif:HMM:NF015763.2
COORDINATES: protein motif:HMM:TIGR04366.1
COORDINATES: similar to AA sequence:RefSeq:WP_015878526.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015000.2
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005327012.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011706068.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011706069.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_019444931.1
4-hydroxythreonine-4-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF016658.2
COORDINATES: similar to AA sequence:RefSeq:WP_019839267.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017412489.1
COORDINATES: protein motif:HMM:NF013868.2
COORDINATES: protein motif:HMM:NF013767.2
COORDINATES: similar to AA sequence:RefSeq:WP_017412709.1
COORDINATES: protein motif:HMM:NF028479.2
COORDINATES: protein motif:HMM:NF013867.2
COORDINATES: similar to AA sequence:RefSeq:WP_019934699.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934700.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934523.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005352393.1
GO:0005298 - proline:sodium symporter activity [Evidence IEA]
GO:0015824 - proline transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF008812.1
COORDINATES: similar to AA sequence:RefSeq:WP_005309974.1
COORDINATES: similar to AA sequence:RefSeq:WP_019933221.1
COORDINATES: protein motif:HMM:NF019236.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:NF016134.2
COORDINATES: similar to AA sequence:RefSeq:WP_013724004.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase-activating protein
COORDINATES: protein motif:HMM:NF006732.0
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: protein motif:HMM:NF015686.2
COORDINATES: similar to AA sequence:RefSeq:WP_011706319.1
GO:0004017 - adenylate kinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017408188.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016152086.1
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: similar to AA sequence:RefSeq:WP_005893372.1
GO:0043867 - 7-cyano-7-deazaguanine tRNA-ribosyltransferase activity [Evidence IEA]; GO:0033739 - preQ1 synthase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
COORDINATES: similar to AA sequence:RefSeq:WP_005335638.1
COORDINATES: protein motif:HMM:NF020037.2
COORDINATES: protein motif:HMM:NF015784.2
GO:0051782 - negative regulation of cell division [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
SulA-like leucine-rich domain-containing protein
COORDINATES: protein motif:HMM:NF021358.2
COORDINATES: protein motif:HMM:NF018516.2
type VI secretion system ImpA family N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF028299.2
type VI secretion system domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010454448.1
GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
type VI secretion system contractile sheath small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012728424.1
GO:0033104 - type VI protein secretion system complex [Evidence IEA]
type VI secretion system contractile sheath large subunit
COORDINATES: protein motif:HMM:TIGR03344.1
type VI secretion system tube protein TssD
COORDINATES: protein motif:HMM:TIGR03357.1
type VI secretion system baseplate subunit TssE
COORDINATES: protein motif:HMM:NF017733.2
type VI secretion system baseplate subunit TssF
COORDINATES: protein motif:HMM:TIGR03347.1
type VI secretion system baseplate subunit TssG
COORDINATES: protein motif:HMM:TIGR03345.1
COORDINATES: protein motif:HMM:NF017739.2
type VI secretion system tip protein VgrG
COORDINATES: protein motif:HMM:TIGR01646.1
COORDINATES: protein motif:HMM:NF021456.2
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: protein motif:HMM:NF025047.2
COORDINATES: protein motif:HMM:TIGR03352.1
type VI secretion system lipoprotein TssJ
COORDINATES: protein motif:HMM:TIGR03353.2
type VI secretion system baseplate subunit TssK
COORDINATES: protein motif:HMM:NF021377.2
DotU family type IV/VI secretion system protein
COORDINATES: protein motif:HMM:NF025689.2
COORDINATES: similar to AA sequence:RefSeq:WP_010634284.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: protein motif:HMM:NF022170.2
COORDINATES: protein motif:HMM:NF007130.1
COORDINATES: protein motif:HMM:TIGR01413.1
COORDINATES: protein motif:HMM:NF024376.2
PhnD/SsuA/transferrin family substrate-binding protein
COORDINATES: protein motif:HMM:NF014368.2
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]; GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01427.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
fructose-specific PTS transporter subunit EIIC
COORDINATES: protein motif:HMM:TIGR00359.1
GO:0019191 - cellobiose transmembrane transporter activity [Evidence IEA]; GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013292.2
COORDINATES: protein motif:HMM:NF013079.2
COORDINATES: similar to AA sequence:RefSeq:WP_005314040.1
COORDINATES: similar to AA sequence:RefSeq:WP_005314045.1
PTS lactose/cellobiose transporter subunit IIA
COORDINATES: similar to AA sequence:RefSeq:WP_044282811.1
COORDINATES: protein motif:HMM:NF014600.2
COORDINATES: similar to AA sequence:RefSeq:WP_012729355.1
GO:0009014 - succinyl-diaminopimelate desuccinylase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005337930.1
COORDINATES: similar to AA sequence:RefSeq:WP_016350173.1
COORDINATES: similar to AA sequence:RefSeq:WP_014292172.1
COORDINATES: protein motif:HMM:NF025027.2
COORDINATES: similar to AA sequence:RefSeq:WP_019934373.1
COORDINATES: similar to AA sequence:RefSeq:WP_019000659.1
COORDINATES: similar to AA sequence:RefSeq:WP_010675204.1
COORDINATES: similar to AA sequence:RefSeq:WP_017783116.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
Fe(2+) transporter permease subunit FeoB
COORDINATES: similar to AA sequence:RefSeq:WP_005354087.1
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: protein motif:HMM:NF017868.2
COORDINATES: protein motif:HMM:TIGR01533.1
5'-nucleotidase, lipoprotein e(P4) family
COORDINATES: similar to AA sequence:RefSeq:WP_015878528.1
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: similar to AA sequence:RefSeq:WP_015879543.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_014292163.1
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
glycine cleavage system transcriptional repressor
COORDINATES: similar to AA sequence:RefSeq:WP_005347587.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: protein motif:HMM:NF018509.2
outer membrane protein assembly factor BamC
COORDINATES: similar to AA sequence:RefSeq:WP_016349589.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF037472.2
COORDINATES: protein motif:HMM:NF018637.2
arsenic metallochaperone ArsD family protein
COORDINATES: similar to AA sequence:RefSeq:WP_131199602.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015446 - ATPase-coupled arsenite transmembrane transporter activity [Evidence IEA]
GO:0071722 - detoxification of arsenic-containing substance [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00832.1
COORDINATES: similar to AA sequence:RefSeq:WP_001465662.1
COORDINATES: protein motif:HMM:TIGR02937.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF022461.2
COORDINATES: protein motif:HMM:NF020348.2
heme-binding beta-barrel domain-containing protein
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF012669.2
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_000621656.1
COORDINATES: protein motif:HMM:NF012005.0
COORDINATES: protein motif:HMM:TIGR00167.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008277.0
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000870946.1
COORDINATES: protein motif:HMM:TIGR00792.1
GO:0015486 - glycoside-pentoside-hexuronide:cation symporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0006812 - cation transport [Evidence IEA]
glycoside-pentoside-hexuronide (GPH):cation symporter
COORDINATES: protein motif:HMM:NF007790.0
solute:sodium symporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_005346285.1
COORDINATES: similar to AA sequence:RefSeq:WP_014290817.1
COORDINATES: protein motif:HMM:TIGR00370.1
COORDINATES: protein motif:HMM:TIGR00724.1
biotin-dependent carboxyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005346329.1
COORDINATES: similar to AA sequence:RefSeq:WP_015878986.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_005345092.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005301526.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_005301524.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
ATP-dependent protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_010674181.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005894859.1
COORDINATES: similar to AA sequence:RefSeq:WP_005334297.1
COORDINATES: similar to AA sequence:RefSeq:WP_005334294.1
COORDINATES: similar to AA sequence:RefSeq:WP_005334292.1
GO:0032297 - negative regulation of DNA-templated DNA replication initiation [Evidence IEA]
replication initiation negative regulator SeqA
COORDINATES: similar to AA sequence:RefSeq:WP_017766085.1
GO:0004614 - phosphoglucomutase activity [Evidence IEA]
phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
COORDINATES: similar to AA sequence:RefSeq:WP_005351982.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: protein motif:HMM:NF003706.0
COORDINATES: similar to AA sequence:RefSeq:WP_016350921.1
COORDINATES: protein motif:HMM:NF025865.2
COORDINATES: protein motif:HMM:NF022512.2
COORDINATES: similar to AA sequence:RefSeq:WP_005362737.1
COORDINATES: protein motif:HMM:NF023312.2
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: protein motif:HMM:NF027513.2
COORDINATES: similar to AA sequence:RefSeq:WP_017786887.1
GO:0101006 - protein histidine phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024898.2
COORDINATES: protein motif:HMM:NF013335.2
COORDINATES: protein motif:HMM:NF006944.0
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008506.0
COORDINATES: similar to AA sequence:RefSeq:WP_000449965.1
GO:0008775 - acetate CoA-transferase activity [Evidence IEA]
GO:0006084 - acetyl-CoA metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006958.0
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: protein motif:HMM:NF016855.2
TfoX/Sxy family DNA transformation protein
COORDINATES: protein motif:HMM:NF025733.2
COORDINATES: similar to AA sequence:RefSeq:WP_014293163.1
COORDINATES: protein motif:HMM:NF016241.2
COORDINATES: protein motif:HMM:NF019583.2
COORDINATES: similar to AA sequence:RefSeq:WP_012368397.1
translesion error-prone DNA polymerase V autoproteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005346928.1
GO:0003684 - damaged DNA binding [Evidence IEA]
translesion error-prone DNA polymerase V subunit UmuC
COORDINATES: similar to AA sequence:RefSeq:WP_012971673.1
molybdopterin oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010880781.1
COORDINATES: protein motif:HMM:NF016838.2
GO:0019645 - anaerobic electron transport chain [Evidence IEA]
dimethyl sulfoxide reductase anchor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_076612303.1
programmed frameshift; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013237.2
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: protein motif:HMM:NF024772.2
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: protein motif:HMM:NF013502.2
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: similar to AA sequence:RefSeq:WP_014582023.1
COORDINATES: similar to AA sequence:RefSeq:WP_014291885.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013383.2
GO:0050661 - NADP binding [Evidence IEA]
NAD(P)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014381.2
NAD/NADP octopine/nopaline dehydrogenase family protein
COORDINATES: protein motif:HMM:NF021371.2
COORDINATES: protein motif:HMM:NF001947.0
COORDINATES: similar to AA sequence:RefSeq:WP_005352364.1
prolyl-tRNA synthetase associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019935179.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:NF024947.2
SbcC/MukB-like Walker B domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019446010.1
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: protein motif:HMM:NF015318.2
COORDINATES: protein motif:HMM:NF012544.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00168
Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_019934824.1
COORDINATES: similar to AA sequence:RefSeq:WP_005345022.1
GO:0015297 - antiporter activity [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005346735.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934676.1
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_005894379.1
COORDINATES: protein motif:HMM:NF016300.2
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014089.2
COORDINATES: similar to AA sequence:RefSeq:WP_019936106.1
COORDINATES: protein motif:HMM:TIGR03359.1
COORDINATES: protein motif:HMM:TIGR03361.1
type VI secretion system tip protein TssI/VgrG
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: protein motif:HMM:NF023482.2
COORDINATES: similar to AA sequence:RefSeq:WP_019934097.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
vitamin B12 ABC transporter permease BtuC
COORDINATES: similar to AA sequence:RefSeq:WP_011706547.1
COORDINATES: similar to AA sequence:RefSeq:WP_010633543.1
COORDINATES: similar to AA sequence:RefSeq:WP_011706506.1
COORDINATES: similar to AA sequence:RefSeq:WP_010633585.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015879139.1
COORDINATES: similar to AA sequence:RefSeq:WP_017778403.1
COORDINATES: protein motif:HMM:TIGR02285.1
COORDINATES: protein motif:HMM:NF014757.2
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013586.2
COORDINATES: similar to AA sequence:RefSeq:WP_014292787.1
COORDINATES: protein motif:HMM:NF019844.2
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: protein motif:HMM:NF012489.2
COORDINATES: similar to AA sequence:RefSeq:WP_005353620.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
GO:0006188 - IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005319180.1
high frequency lysogenization protein HflD
COORDINATES: similar to AA sequence:RefSeq:WP_001038005.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0004808 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]; GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015879389.1
COORDINATES: similar to AA sequence:RefSeq:WP_017785163.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015879387.1
GO:0008156 - negative regulation of DNA replication [Evidence IEA]; GO:0009409 - response to cold [Evidence IEA]
cold shock domain-containing protein CspD
COORDINATES: similar to AA sequence:RefSeq:WP_005310725.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934183.1
GO:0043335 - protein unfolding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpA
COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934182.1
GO:0004057 - arginyltransferase activity [Evidence IEA]
GO:0016598 - protein arginylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019934181.1
GO:0008914 - leucyltransferase activity [Evidence IEA]
leucyl/phenylalanyl-tRNA--protein transferase
COORDINATES: similar to AA sequence:RefSeq:WP_005337104.1
glycine zipper 2TM domain-containing protein
COORDINATES: protein motif:HMM:NF018123.2
COORDINATES: similar to AA sequence:RefSeq:WP_015879381.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012970.2
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011704256.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014291898.1
leucine-responsive transcriptional regulator Lrp
COORDINATES: similar to AA sequence:RefSeq:WP_005346406.1
COORDINATES: similar to AA sequence:RefSeq:WP_005310741.1
GO:0008320 - protein transmembrane transporter activity [Evidence IEA]
outer membrane lipoprotein chaperone LolA
COORDINATES: similar to AA sequence:RefSeq:WP_015879376.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_005337087.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005316928.1
COORDINATES: similar to AA sequence:RefSeq:WP_017787813.1
COORDINATES: similar to AA sequence:RefSeq:WP_005303381.1
COORDINATES: similar to AA sequence:RefSeq:WP_005349736.1
COORDINATES: protein motif:HMM:NF012575.2
COORDINATES: similar to AA sequence:RefSeq:WP_014290566.1
GO:0015293 - symporter activity [Evidence IEA]
GO:0032329 - serine transport [Evidence IEA]; GO:0015826 - threonine transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011047645.1
COORDINATES: similar to AA sequence:RefSeq:WP_012729091.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_017787142.1
phage shock protein operon transcriptional activator
COORDINATES: similar to AA sequence:RefSeq:WP_005361324.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934152.1
envelope stress response membrane protein PspB
COORDINATES: protein motif:HMM:TIGR02978.1
envelope stress response membrane protein PspC
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: similar to AA sequence:RefSeq:WP_014292008.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010454124.1
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010633525.1
COORDINATES: protein motif:HMM:NF007821.0
COORDINATES: protein motif:HMM:TIGR02552.1
SycD/LcrH family type III secretion system chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_005351533.1
COORDINATES: protein motif:HMM:NF013014.2
COORDINATES: similar to AA sequence:RefSeq:WP_019838817.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005361118.1
COORDINATES: protein motif:HMM:NF018755.2
COORDINATES: protein motif:HMM:TIGR00915.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005894827.1
COORDINATES: similar to AA sequence:RefSeq:WP_005356617.1
GO:0006044 - N-acetylglucosamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017413020.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017766091.1
GO:0015572 - N-acetylglucosamine transmembrane transporter activity [Evidence IEA]
N-acetylglucosamine-specific PTS transporter subunit IIBC
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: similar to AA sequence:RefSeq:WP_010455850.1
GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005311071.1
COORDINATES: similar to AA sequence:RefSeq:WP_005897196.1
GO:0008988 - rRNA (adenine-N6-)-methyltransferase activity [Evidence IEA]
23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: protein motif:HMM:NF014795.2
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF026954.2
COORDINATES: protein motif:HMM:NF012471.2
COORDINATES: protein motif:HMM:NF037031.2
COORDINATES: similar to AA sequence:RefSeq:WP_008806149.1
COORDINATES: protein motif:HMM:TIGR00351.1
GO:0009325 - nitrate reductase complex [Evidence IEA]
GO:0008940 - nitrate reductase activity [Evidence IEA]
respiratory nitrate reductase subunit gamma
COORDINATES: protein motif:HMM:TIGR00684.1
GO:0051131 - chaperone-mediated protein complex assembly [Evidence IEA]
nitrate reductase molybdenum cofactor assembly chaperone
COORDINATES: protein motif:HMM:NF026061.2
COORDINATES: protein motif:HMM:TIGR01660.1
GO:0009061 - anaerobic respiration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000040458.1
COORDINATES: protein motif:HMM:NF015786.2
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF013703.2
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025059.2
COORDINATES: similar to AA sequence:RefSeq:WP_011705366.1
GO:0050263 - ribosylpyrimidine nucleosidase activity [Evidence IEA]
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
pyrimidine-specific ribonucleoside hydrolase RihA
COORDINATES: protein motif:HMM:TIGR00200.1
CinA family nicotinamide mononucleotide deamidase-related protein
COORDINATES: protein motif:HMM:NF005965.0
GO:0046417 - chorismate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005346147.1
COORDINATES: protein motif:HMM:NF024899.2
S1-like domain-containing RNA-binding protein
COORDINATES: protein motif:HMM:NF003392.0
GO:0043043 - peptide biosynthetic process [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012675.2
COORDINATES: similar to AA sequence:RefSeq:WP_005319791.1
COORDINATES: protein motif:HMM:NF013384.2
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008683.0
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF014850.2
COORDINATES: similar to AA sequence:RefSeq:WP_041207141.1
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_017408352.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
putative selenate reductase subunit YgfK
COORDINATES: similar to AA sequence:RefSeq:WP_019839784.1
COORDINATES: protein motif:HMM:NF014758.2
COORDINATES: protein motif:HMM:NF012339.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: protein motif:HMM:NF013923.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013134.2
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_010247747.1
COORDINATES: protein motif:HMM:TIGR03312.1
molybdopterin-dependent oxidoreductase FAD-binding subunit
COORDINATES: protein motif:HMM:TIGR03313.1
molybdopterin-dependent oxidoreductase Mo/Fe-S-binding subunit
COORDINATES: protein motif:HMM:NF014081.2
GO:0008892 - guanine deaminase activity [Evidence IEA]
GO:0006147 - guanine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005358426.1
COORDINATES: similar to AA sequence:RefSeq:WP_011706143.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0033592 - RNA strand annealing activity [Evidence IEA]; GO:0034057 - RNA strand-exchange activity [Evidence IEA]
GO:0010608 - post-transcriptional regulation of gene expression [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005357579.1
GO:0005515 - protein binding [Evidence IEA]; GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF041043.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879245.1
COORDINATES: similar to AA sequence:RefSeq:WP_005355714.1
COORDINATES: protein motif:HMM:NF022648.2
COORDINATES: similar to AA sequence:RefSeq:WP_019933745.1
low molecular weight phosphotyrosine protein phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_011705685.1
COORDINATES: similar to AA sequence:RefSeq:WP_019933776.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0009063 - amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005330838.1
COORDINATES: similar to AA sequence:RefSeq:WP_010674563.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010674492.1
GO:0046912 - acyltransferase activity, acyl groups converted into alkyl on transfer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1
GO:0016020 - membrane [Evidence IEA]; GO:0045281 - succinate dehydrogenase complex [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0000104 - succinate dehydrogenase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
succinate dehydrogenase cytochrome b556 subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1
GO:0045282 - plasma membrane succinate dehydrogenase complex [Evidence IEA]
GO:0000104 - succinate dehydrogenase activity [Evidence IEA]
succinate dehydrogenase, hydrophobic membrane anchor protein
COORDINATES: similar to AA sequence:RefSeq:WP_005358680.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
succinate dehydrogenase flavoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010674497.1
succinate dehydrogenase iron-sulfur subunit
COORDINATES: protein motif:HMM:NF027404.2
COORDINATES: protein motif:HMM:NF012880.2
GO:0016624 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF006914.0
GO:0045252 - oxoglutarate dehydrogenase complex [Evidence IEA]
GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]
GO:0006554 - lysine catabolic process [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
2-oxoglutarate dehydrogenase E1 component
COORDINATES: similar to AA sequence:RefSeq:WP_000179874.1
GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity [Evidence IEA]
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015879293.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_018287377.1
COORDINATES: protein motif:HMM:NF033682.1
COORDINATES: protein motif:HMM:NF015140.2
type I secretion C-terminal target domain-containing protein
COORDINATES: protein motif:HMM:NF022818.2
COORDINATES: similar to AA sequence:RefSeq:WP_019445833.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005902599.1
COORDINATES: similar to AA sequence:RefSeq:WP_005359219.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0000062 - fatty-acyl-CoA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0019217 - regulation of fatty acid metabolic process [Evidence IEA]
fatty acid metabolism transcriptional regulator FadR
COORDINATES: similar to AA sequence:RefSeq:WP_019933667.1
COORDINATES: similar to AA sequence:RefSeq:WP_012017065.1
COORDINATES: similar to AA sequence:RefSeq:WP_001019882.1
GO:0004672 - protein kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003406857.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010674768.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005300804.1
COORDINATES: similar to AA sequence:RefSeq:WP_010674766.1
COORDINATES: similar to AA sequence:RefSeq:WP_004251935.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006222 - UMP biosynthetic process [Evidence IEA]
quinone-dependent dihydroorotate dehydrogenase
COORDINATES: protein motif:HMM:NF018790.2
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: protein motif:HMM:NF013056.2
COORDINATES: protein motif:HMM:TIGR00801.1
nucleobase:cation symporter-2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019933676.1
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015878645.1
GO:0032955 - regulation of division septum assembly [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: similar to AA sequence:RefSeq:WP_011705992.1
COORDINATES: similar to AA sequence:RefSeq:WP_014292488.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011705994.1
COORDINATES: similar to AA sequence:RefSeq:WP_005311273.1
COORDINATES: similar to AA sequence:RefSeq:WP_012767724.1
COORDINATES: protein motif:HMM:NF019843.2
COORDINATES: similar to AA sequence:RefSeq:WP_017412659.1
Ni(II)/Co(II)-binding transcriptional repressor RcnR
COORDINATES: similar to AA sequence:RefSeq:WP_005303928.1
COORDINATES: protein motif:HMM:NF024484.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00167
purine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR01430.1
GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011704561.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014290690.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_014290691.1
GO:0019213 - deacetylase activity [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00514
His leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_019001574.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005324993.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01141.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014292476.1
GO:0004401 - histidinol-phosphatase activity [Evidence IEA]; GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: similar to AA sequence:RefSeq:WP_010674690.1
COORDINATES: similar to AA sequence:RefSeq:WP_005311379.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_005301096.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_005908399.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]; GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
COORDINATES: similar to AA sequence:RefSeq:WP_006080318.1
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF014696.2
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014609.2
PhzF family phenazine biosynthesis isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_019934413.1
COORDINATES: protein motif:HMM:NF019346.2
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: protein motif:HMM:NF023418.2
DUF3488 and transglutaminase-like domain-containing protein
COORDINATES: protein motif:HMM:NF024948.2
transglutaminase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016350593.1
COORDINATES: protein motif:HMM:NF016274.2
GO:0004668 - protein-arginine deiminase activity [Evidence IEA]
GO:0009446 - putrescine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015879917.1
COORDINATES: similar to AA sequence:RefSeq:WP_014831857.1
GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0051903 - S-(hydroxymethyl)glutathione dehydrogenase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0009404 - toxin metabolic process [Evidence IEA]
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_005327357.1
GO:0018738 - S-formylglutathione hydrolase activity [Evidence IEA]
GO:0046292 - formaldehyde metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024771.2
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: protein motif:HMM:NF016203.2
COORDINATES: protein motif:HMM:NF020250.2
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:NF025703.2
COORDINATES: protein motif:HMM:NF021446.2
COORDINATES: protein motif:HMM:NF020947.2
COORDINATES: similar to AA sequence:RefSeq:WP_000218459.1
COORDINATES: protein motif:HMM:NF037675.2
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:TIGR00210.1
GO:0015501 - glutamate:sodium symporter activity [Evidence IEA]
GO:0015813 - L-glutamate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005310655.1
GO:0022900 - electron transport chain [Evidence IEA]
RnfABCDGE type electron transport complex subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_005350790.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00377.1
COORDINATES: protein motif:HMM:NF003417.0
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015736.2
COORDINATES: similar to AA sequence:RefSeq:WP_011705843.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF008673.0
COORDINATES: protein motif:HMM:NF018870.2
COORDINATES: similar to AA sequence:RefSeq:WP_019935366.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: protein motif:HMM:NF014325.2
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017765289.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019933158.1
GO:0071705 - nitrogen compound transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001295339.1
COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1
GO:0015424 - ABC-type amino acid transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0003333 - amino acid transmembrane transport [Evidence IEA]
arginine ABC transporter ATP-binding protein ArtP
COORDINATES: protein motif:HMM:NF022441.2
COORDINATES: similar to AA sequence:RefSeq:WP_005344496.1
DNA-binding transcriptional regulator YciT
COORDINATES: similar to AA sequence:RefSeq:WP_017410407.1
formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_010633456.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0043687 - post-translational protein modification [Evidence IEA]
glycyl-radical enzyme activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_005359498.1
similar to transaldolase from Escherichia coli; many organisms have multiple copies; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005337730.1
COORDINATES: similar to AA sequence:RefSeq:WP_005899803.1
COORDINATES: similar to AA sequence:RefSeq:WP_012728911.1
COORDINATES: protein motif:HMM:NF033652.1
COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000153129.1
COORDINATES: similar to AA sequence:RefSeq:WP_014154242.1
COORDINATES: similar to AA sequence:RefSeq:WP_005352171.1
COORDINATES: similar to AA sequence:RefSeq:WP_010674696.1
COORDINATES: similar to AA sequence:RefSeq:WP_005336751.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: protein motif:HMM:NF018684.2
COORDINATES: similar to AA sequence:RefSeq:WP_012729509.1
COORDINATES: protein motif:HMM:NF024981.2
COORDINATES: similar to AA sequence:RefSeq:WP_005315807.1
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF040138.1
COORDINATES: protein motif:HMM:NF009732.0
GO:0008119 - thiopurine S-methyltransferase activity [Evidence IEA]
GO:0010038 - response to metal ion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019000260.1
COORDINATES: protein motif:HMM:NF019313.2
COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1
stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014292720.1
ferric iron uptake transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017412636.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019935758.1
COORDINATES: similar to AA sequence:RefSeq:WP_012729247.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004340 - glucokinase activity [Evidence IEA]; GO:0005536 - glucose binding [Evidence IEA]
GO:0051156 - glucose 6-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: similar to AA sequence:RefSeq:WP_005902819.1
COORDINATES: similar to AA sequence:RefSeq:WP_010673908.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: similar to AA sequence:RefSeq:WP_000388219.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_010674798.1
COORDINATES: similar to AA sequence:RefSeq:WP_005300715.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0075713 - establishment of integrated proviral latency [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0006417 - regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: similar to AA sequence:RefSeq:WP_005345410.1
spermidine/putrescine ABC transporter permease PotC
COORDINATES: similar to AA sequence:RefSeq:WP_019933646.1
spermidine/putrescine ABC transporter permease PotB
COORDINATES: similar to AA sequence:RefSeq:WP_019933645.1
GO:0015846 - polyamine transport [Evidence IEA]
spermidine/putrescine ABC transporter ATP-binding protein PotA
COORDINATES: protein motif:HMM:NF013954.2
GO:0004040 - amidase activity [Evidence IEA]
glucosaminidase domain-containing protein
COORDINATES: protein motif:HMM:NF017079.2
spore coat protein U domain-containing protein
COORDINATES: protein motif:HMM:NF012565.2
GO:0071555 - cell wall organization [Evidence IEA]
COORDINATES: protein motif:HMM:NF012786.2
GO:0015473 - fimbrial usher porin activity [Evidence IEA]
fimbria/pilus outer membrane usher protein
COORDINATES: similar to AA sequence:RefSeq:WP_005357526.1
COORDINATES: similar to AA sequence:RefSeq:WP_019933641.1
COORDINATES: similar to AA sequence:RefSeq:WP_000611911.1
COORDINATES: similar to AA sequence:RefSeq:WP_017785370.1
GO:0008995 - ribonuclease E activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010674735.1
23S rRNA pseudouridine(955/2504/2580) synthase RluC
COORDINATES: similar to AA sequence:RefSeq:WP_019933742.1
COORDINATES: protein motif:HMM:NF017658.2
filamentous hemagglutinin N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_001125202.1
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_011147057.1
COORDINATES: similar to AA sequence:RefSeq:WP_005352633.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000288132.1
COORDINATES: similar to AA sequence:RefSeq:WP_005352637.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011706106.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014292450.1
COORDINATES: similar to AA sequence:RefSeq:WP_005311501.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03461.1
GO:0008696 - 4-amino-4-deoxychorismate lyase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]; GO:0008153 - para-aminobenzoic acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017788072.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019933731.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00678.1
COORDINATES: similar to AA sequence:RefSeq:WP_017785359.1
COORDINATES: similar to AA sequence:RefSeq:WP_017765399.1
COORDINATES: similar to AA sequence:RefSeq:WP_003100310.1
septal ring lytic transglycosylase RlpA family protein
COORDINATES: protein motif:HMM:NF016828.2
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: protein motif:HMM:NF012485.2
pilus assembly protein N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF028274.2
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:NF012694.2
COORDINATES: protein motif:HMM:NF024792.2
pilus assembly protein TadG-related protein
COORDINATES: protein motif:HMM:NF016611.2
COORDINATES: similar to AA sequence:RefSeq:WP_005356839.1
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: protein motif:HMM:NF014919.2
COORDINATES: similar to AA sequence:RefSeq:WP_012729273.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017408387.1
COORDINATES: similar to AA sequence:RefSeq:WP_012729492.1
COORDINATES: similar to AA sequence:RefSeq:WP_011706076.1
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: protein motif:HMM:NF012722.2
COORDINATES: similar to AA sequence:RefSeq:WP_005336879.1
COORDINATES: similar to AA sequence:RefSeq:WP_017412080.1
CPXCG motif-containing cysteine-rich protein
COORDINATES: similar to AA sequence:RefSeq:WP_019445844.1
COORDINATES: similar to AA sequence:RefSeq:WP_014292505.1
COORDINATES: similar to AA sequence:RefSeq:WP_005897967.1
COORDINATES: protein motif:HMM:NF012382.2
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011707486.1
COORDINATES: protein motif:HMM:NF023714.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611902.1
COORDINATES: protein motif:HMM:NF018938.2
COORDINATES: protein motif:HMM:NF016998.2
phage/plasmid replication protein, II/X family
COORDINATES: protein motif:HMM:NF020022.2
COORDINATES: protein motif:HMM:TIGR01509.1
COORDINATES: protein motif:HMM:NF025712.2
Lar family restriction alleviation protein
COORDINATES: protein motif:HMM:NF014900.2
COORDINATES: similar to AA sequence:RefSeq:WP_015878972.1
[formate-C-acetyltransferase]-activating enzyme
COORDINATES: protein motif:HMM:NF013116.2
COORDINATES: protein motif:HMM:NF002060.0
GO:0016410 - N-acyltransferase activity [Evidence IEA]
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: protein motif:HMM:NF016494.2
COORDINATES: similar to AA sequence:RefSeq:WP_005348824.1
YjjW family glycine radical enzyme activase
COORDINATES: protein motif:HMM:NF022676.2
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_014291875.1
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:TIGR03605.1
COORDINATES: protein motif:HMM:TIGR02293.1
COORDINATES: protein motif:HMM:NF020387.2
COORDINATES: protein motif:HMM:NF021255.2
COORDINATES: similar to AA sequence:RefSeq:WP_005300832.1
COORDINATES: similar to AA sequence:RefSeq:WP_014292546.1
GO:0008693 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [Evidence IEA]
bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_005907750.1
COORDINATES: similar to AA sequence:RefSeq:WP_017785393.1
COORDINATES: similar to AA sequence:RefSeq:WP_017409644.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019446410.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
GO:0001510 - RNA methylation [Evidence IEA]
16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
COORDINATES: similar to AA sequence:RefSeq:WP_005311516.1
COORDINATES: similar to AA sequence:RefSeq:WP_005352691.1
COORDINATES: similar to AA sequence:RefSeq:WP_010674310.1
GO:0004462 - lactoylglutathione lyase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0051596 - methylglyoxal catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011706457.1
COORDINATES: similar to AA sequence:RefSeq:WP_015878527.1
GO:0016896 - exoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]; GO:0042780 - tRNA 3'-end processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005353650.1
COORDINATES: similar to AA sequence:RefSeq:WP_010931119.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO:0006801 - superoxide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: protein motif:HMM:NF021886.2
COORDINATES: similar to AA sequence:RefSeq:WP_005346294.1
COORDINATES: similar to AA sequence:RefSeq:WP_000124858.1
COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1
COORDINATES: similar to AA sequence:RefSeq:WP_015878810.1
COORDINATES: similar to AA sequence:RefSeq:WP_010674801.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014839.2
COORDINATES: similar to AA sequence:RefSeq:WP_017940309.1
COORDINATES: protein motif:HMM:NF039293.1
COORDINATES: protein motif:HMM:NF021359.2
COORDINATES: protein motif:HMM:NF024092.2
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF033527.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934524.1
GO:0016835 - carbon-oxygen lyase activity [Evidence IEA]
N-acetylmuramic acid 6-phosphate etherase
COORDINATES: similar to AA sequence:RefSeq:WP_017778509.1
PTS N-acetylmuramic acid transporter subunit IIBC
COORDINATES: similar to AA sequence:RefSeq:WP_011705191.1
COORDINATES: protein motif:HMM:NF017021.2
COORDINATES: similar to AA sequence:RefSeq:WP_005311470.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011706091.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015878613.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
iron-sulfur cluster carrier protein ApbC
COORDINATES: similar to AA sequence:RefSeq:WP_017412218.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005360351.1
COORDINATES: similar to AA sequence:RefSeq:WP_014292426.1
COORDINATES: similar to AA sequence:RefSeq:WP_014292425.1
COORDINATES: protein motif:HMM:NF013647.2
COORDINATES: protein motif:HMM:NF012365.2
COORDINATES: protein motif:HMM:NF003220.0
COORDINATES: protein motif:HMM:NF003235.0
COORDINATES: protein motif:HMM:TIGR00309.1
GO:0016471 - vacuolar proton-transporting V-type ATPase complex [Evidence IEA]
GO:0008553 - P-type proton-exporting transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010673278.1
COORDINATES: protein motif:HMM:TIGR00520.1
COORDINATES: similar to AA sequence:RefSeq:WP_005302812.1
GO:0006274 - DNA replication termination [Evidence IEA]
DNA replication terminus site-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005343617.1
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: similar to AA sequence:RefSeq:WP_019934140.1
COORDINATES: similar to AA sequence:RefSeq:WP_014292562.1
GO:1990961 - xenobiotic detoxification by transmembrane export across the plasma membrane [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
Bcr/CflA family multidrug efflux MFS transporter
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF023351.2
inverse autotransporter beta domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000462687.1
aspartate/tyrosine/aromatic aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005351608.1
GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0008852 - exodeoxyribonuclease I activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005905568.1
COORDINATES: protein motif:HMM:NF023375.2
COORDINATES: similar to AA sequence:RefSeq:WP_010634010.1
COORDINATES: similar to AA sequence:RefSeq:WP_017764519.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0008990 - rRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL
COORDINATES: protein motif:HMM:NF015466.2
COORDINATES: protein motif:HMM:NF019029.2
COORDINATES: protein motif:HMM:NF014025.2
COORDINATES: similar to AA sequence:RefSeq:WP_016350612.1
COORDINATES: protein motif:HMM:NF007794.0
COORDINATES: similar to AA sequence:RefSeq:WP_010455817.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014292591.1
COORDINATES: protein motif:HMM:NF012345.2
COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF027306.2
CS1-pili formation C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR03423.1
SH3 domain-containing C40 family peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_005314445.1
COORDINATES: similar to AA sequence:RefSeq:WP_007934746.1
COORDINATES: protein motif:HMM:TIGR01322.1
GO:0004564 - beta-fructofuranosidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024212.2
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019840689.1
COORDINATES: protein motif:HMM:NF024905.2
COORDINATES: similar to AA sequence:RefSeq:WP_005350961.1
COORDINATES: protein motif:HMM:NF018749.2
COORDINATES: similar to AA sequence:RefSeq:WP_017786840.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017784121.1
COORDINATES: similar to AA sequence:RefSeq:WP_017786842.1
COORDINATES: similar to AA sequence:RefSeq:WP_017784123.1
COORDINATES: similar to AA sequence:RefSeq:WP_005312466.1
COORDINATES: protein motif:HMM:TIGR00156.1
COORDINATES: protein motif:HMM:NF033674.1
NirD/YgiW/YdeI family stress tolerance protein
COORDINATES: protein motif:HMM:NF040127.1
COORDINATES: similar to AA sequence:RefSeq:WP_005315468.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005333197.1
GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0042273 - ribosomal large subunit biogenesis [Evidence IEA]
50S ribosomal protein L3 N(5)-glutamine methyltransferase
COORDINATES: protein motif:HMM:NF003432.0
COORDINATES: protein motif:HMM:NF013696.2
peptidase dimerization domain-containing protein
COORDINATES: protein motif:HMM:NF022743.2
COORDINATES: protein motif:HMM:NF024773.2
COORDINATES: protein motif:HMM:NF037374.2
COORDINATES: protein motif:HMM:NF019237.2
COORDINATES: protein motif:HMM:NF037170.2
NTP transferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR03172.2
selenium cofactor biosynthesis protein YqeC
COORDINATES: protein motif:HMM:NF014662.2
COORDINATES: protein motif:HMM:TIGR03309.1
selenium-dependent molybdenum cofactor biosynthesis protein YqeB
COORDINATES: similar to AA sequence:RefSeq:WP_017784974.1
COORDINATES: similar to AA sequence:RefSeq:WP_005352275.1
COORDINATES: protein motif:HMM:NF006058.0
GO:0008838 - diaminopropionate ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017408345.1
YgeY family selenium metabolism-linked hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_001264442.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010635806.1
GO:0008804 - carbamate kinase activity [Evidence IEA]
GO:0006525 - arginine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005299048.1
COORDINATES: similar to AA sequence:RefSeq:WP_005346738.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: protein motif:HMM:TIGR00379.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016156.2
COORDINATES: similar to AA sequence:RefSeq:WP_009143548.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002059893.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000450731.1
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_010433880.1
GO:0050114 - myo-inosose-2 dehydratase activity [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04377.1
GO:0016823 - hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)
COORDINATES: similar to AA sequence:RefSeq:WP_008502114.1
GO:0047590 - 5-dehydro-2-deoxygluconokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000033840.1
COORDINATES: protein motif:HMM:TIGR04380.1
GO:0050112 - inositol 2-dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00879.1
COORDINATES: similar to AA sequence:RefSeq:WP_005357169.1
COORDINATES: protein motif:HMM:NF014728.2
COORDINATES: protein motif:HMM:NF014699.2
COORDINATES: similar to AA sequence:RefSeq:WP_012729412.1
GO:0031004 - potassium ion-transporting ATPase complex [Evidence IEA]
GO:0008556 - P-type potassium transmembrane transporter activity [Evidence IEA]
potassium-transporting ATPase subunit KdpB
COORDINATES: similar to AA sequence:RefSeq:WP_005908032.1
potassium-transporting ATPase subunit KdpA
COORDINATES: similar to AA sequence:RefSeq:WP_019446533.1
small-conductance mechanosensitive channel MscS
COORDINATES: protein motif:HMM:NF007702.0
GO:0004362 - glutathione-disulfide reductase (NADPH) activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011705968.1
LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase, an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species; Derived by automated computational analysis using gene prediction method: Protein Homology.
lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016352340.1
COORDINATES: similar to AA sequence:RefSeq:WP_012729225.1
COORDINATES: similar to AA sequence:RefSeq:WP_019446164.1
COORDINATES: similar to AA sequence:RefSeq:WP_005895963.1
COORDINATES: similar to AA sequence:RefSeq:WP_000450476.1
COORDINATES: similar to AA sequence:RefSeq:WP_000081674.1
COORDINATES: protein motif:HMM:NF013784.2
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008730.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012531.2
phenylacetate--CoA ligase family protein
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: similar to AA sequence:RefSeq:WP_005354884.1
protein-disulfide reductase DsbD family protein
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: similar to AA sequence:RefSeq:WP_015878567.1
COORDINATES: similar to AA sequence:RefSeq:WP_000145757.1
COORDINATES: similar to AA sequence:RefSeq:WP_005338384.1
COORDINATES: protein motif:HMM:NF015338.2
COORDINATES: protein motif:HMM:NF024591.2
COORDINATES: protein motif:HMM:NF009093.0
GO:0003858 - 3-hydroxybutyrate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018066.2
acetoacetate decarboxylase family protein
COORDINATES: protein motif:HMM:NF002614.0
COORDINATES: protein motif:HMM:NF002834.0
GO:0047761 - butyrate kinase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013665.2
COORDINATES: protein motif:HMM:NF013239.2
COORDINATES: similar to AA sequence:RefSeq:WP_017412302.1
GO:0005275 - amine transmembrane transporter activity [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
2-oxoglutarate and iron-dependent oxygenase domain-containing protein
COORDINATES: protein motif:HMM:NF015150.2
COORDINATES: protein motif:HMM:TIGR00645.1
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: protein motif:HMM:NF017985.2
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: protein motif:HMM:NF013143.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024793.2
COORDINATES: protein motif:HMM:NF013465.2
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016350625.1
COORDINATES: similar to AA sequence:RefSeq:WP_005358695.1
COORDINATES: protein motif:HMM:NF024527.2
COORDINATES: similar to AA sequence:RefSeq:WP_005360382.1
COORDINATES: similar to AA sequence:RefSeq:WP_005323521.1
GO:0046820 - 4-amino-4-deoxychorismate synthase activity [Evidence IEA]
aminodeoxychorismate synthase component I
COORDINATES: protein motif:HMM:NF007980.0
GO:0010945 - CoA pyrophosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF037026.2
COORDINATES: similar to AA sequence:RefSeq:WP_005341272.1
COORDINATES: protein motif:HMM:NF017569.2
COORDINATES: similar to AA sequence:RefSeq:WP_000738492.1
COORDINATES: similar to AA sequence:RefSeq:WP_005361682.1
COORDINATES: similar to AA sequence:RefSeq:WP_001080338.1
COORDINATES: protein motif:HMM:TIGR00093.1
COORDINATES: similar to AA sequence:RefSeq:WP_005337458.1
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005320086.1
COORDINATES: similar to AA sequence:RefSeq:WP_005347034.1
GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015879301.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0034040 - ATPase-coupled lipid transmembrane transporter activity [Evidence IEA]
lipid A ABC transporter ATP-binding protein/permease MsbA
COORDINATES: protein motif:HMM:TIGR00361.1
GO:0009290 - DNA import into cell involved in transformation [Evidence IEA]
DNA internalization-related competence protein ComEC/Rec2
COORDINATES: similar to AA sequence:RefSeq:WP_005331307.1
COORDINATES: protein motif:HMM:NF021363.2
COORDINATES: protein motif:HMM:NF009586.0
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
COORDINATES: protein motif:HMM:TIGR01930.1
COORDINATES: protein motif:HMM:NF012336.2
COORDINATES: protein motif:HMM:NF016854.2
COORDINATES: protein motif:HMM:NF025607.2
COORDINATES: protein motif:HMM:NF014564.2
COORDINATES: similar to AA sequence:RefSeq:WP_015879304.1
GO:0042953 - lipoprotein transport [Evidence IEA]
lipoprotein-releasing ABC transporter permease subunit LolE
COORDINATES: similar to AA sequence:RefSeq:WP_019935497.1
lipoprotein-releasing ABC transporter ATP-binding protein LolD
COORDINATES: similar to AA sequence:RefSeq:WP_017784733.1
lipoprotein-releasing ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005301537.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF022425.2
COORDINATES: similar to AA sequence:RefSeq:WP_017412573.1
COORDINATES: similar to AA sequence:RefSeq:WP_010634652.1
COORDINATES: protein motif:HMM:TIGR00338.1
GO:0036424 - L-phosphoserine phosphatase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010673774.1
COORDINATES: similar to AA sequence:RefSeq:WP_010353668.1
COORDINATES: protein motif:HMM:NF022605.2
COORDINATES: similar to AA sequence:RefSeq:WP_011704980.1
COORDINATES: similar to AA sequence:RefSeq:WP_014293017.1
COORDINATES: similar to AA sequence:RefSeq:WP_016351165.1
GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
HlyD family type I secretion periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005300224.1
COORDINATES: protein motif:HMM:TIGR02142.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdenum ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010674165.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]
molybdate ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005359419.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005362809.1
COORDINATES: protein motif:HMM:NF014269.2
LON peptidase substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016351311.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: protein motif:HMM:NF021452.2
COORDINATES: similar to AA sequence:RefSeq:WP_005348395.1
COORDINATES: protein motif:HMM:NF013395.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02607.1
COORDINATES: protein motif:HMM:NF021206.2
COORDINATES: protein motif:HMM:TIGR02681.1
COORDINATES: similar to AA sequence:RefSeq:WP_000470634.1
COORDINATES: protein motif:HMM:NF017663.2
GO:0000287 - magnesium ion binding [Evidence IEA]
RusA family crossover junction endodeoxyribonuclease
COORDINATES: protein motif:HMM:NF040563.1
COORDINATES: protein motif:HMM:NF013122.2
COORDINATES: protein motif:HMM:NF025107.2
COORDINATES: similar to AA sequence:RefSeq:WP_010634539.1
GO:0015074 - DNA integration [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_010257694.1
COORDINATES: protein motif:HMM:NF037997.1
GO:0015114 - phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]; GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010633547.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: protein motif:HMM:NF022459.2
COORDINATES: similar to AA sequence:RefSeq:WP_005346783.1
COORDINATES: protein motif:HMM:NF018506.2
GO:0015144 - carbohydrate transmembrane transporter activity [Evidence IEA]
GO:0034219 - carbohydrate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005911014.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0006014 - D-ribose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019933781.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011706080.1
GO:0043828 - tRNA 2-selenouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005300995.1
COORDINATES: protein motif:HMM:NF025606.2
DUF4344 domain-containing metallopeptidase
COORDINATES: protein motif:HMM:NF024672.2
RNA-binding S4 domain-containing protein
COORDINATES: protein motif:HMM:TIGR04102.1
SEC-C metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF016408.2
COORDINATES: similar to AA sequence:RefSeq:WP_000972596.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: protein motif:HMM:NF001299.0
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000210 - NAD+ diphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000209756.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017666.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0032775 - DNA methylation on adenine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005896739.1
COORDINATES: protein motif:HMM:NF017939.2
COORDINATES: similar to AA sequence:RefSeq:WP_005310748.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013346115.1
GO:0009403 - toxin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019935291.1
COORDINATES: similar to AA sequence:RefSeq:WP_014292186.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011706578.1
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017786223.1
UvrY/SirA/GacA family response regulator transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_011705883.1
COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1
COORDINATES: similar to AA sequence:RefSeq:WP_012729310.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005309936.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011705496.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005309928.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]; GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005325501.1
COORDINATES: protein motif:HMM:NF016668.2
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: similar to AA sequence:RefSeq:WP_005334041.1
penicillin-binding protein activator LpoB
COORDINATES: protein motif:HMM:NF018889.2
COORDINATES: similar to AA sequence:RefSeq:WP_005344639.1
COORDINATES: similar to AA sequence:RefSeq:WP_005344642.1
COORDINATES: similar to AA sequence:RefSeq:WP_005353068.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]
COORDINATES: protein motif:HMM:NF012651.2
COORDINATES: similar to AA sequence:RefSeq:WP_005347211.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
cytochrome o ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_015879152.1
cytochrome o ubiquinol oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_015879151.1
GO:0022904 - respiratory electron transport chain [Evidence IEA]
cytochrome o ubiquinol oxidase subunit III
COORDINATES: similar to AA sequence:RefSeq:NP_308510.1
cytochrome o ubiquinol oxidase subunit IV
COORDINATES: similar to AA sequence:RefSeq:WP_019934749.1
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO:0048034 - heme O biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005302931.1
COORDINATES: similar to AA sequence:RefSeq:WP_005351403.1
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: protein motif:HMM:NF020859.2
Mu transposase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF017437.2
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: similar to AA sequence:RefSeq:WP_005396790.1
COORDINATES: protein motif:HMM:NF033449.0
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:NF039983.1
COORDINATES: protein motif:HMM:NF033453.1
BREX-3 system P-loop-containing protein BrxF
COORDINATES: similar to AA sequence:RefSeq:WP_011788458.1
COORDINATES: protein motif:HMM:NF025386.2
COORDINATES: protein motif:HMM:NF024275.2
COORDINATES: similar to AA sequence:RefSeq:WP_017420534.1
COORDINATES: similar to AA sequence:RefSeq:WP_020198017.1
COORDINATES: protein motif:HMM:NF019421.2
COORDINATES: similar to AA sequence:RefSeq:WP_019935456.1
COORDINATES: protein motif:HMM:NF024852.2
COORDINATES: protein motif:HMM:TIGR01813.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014477.2
COORDINATES: similar to AA sequence:RefSeq:WP_015880200.1
COORDINATES: similar to AA sequence:RefSeq:WP_000130175.1
COORDINATES: similar to AA sequence:RefSeq:YP_026188.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01536.1
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:NF006452.0
crotonase/enoyl-CoA hydratase family protein
COORDINATES: protein motif:HMM:NF013179.2
COORDINATES: protein motif:HMM:NF025611.2
COORDINATES: similar to AA sequence:RefSeq:WP_005362996.1
LysR family transcriptional regulator ArgP
COORDINATES: similar to AA sequence:RefSeq:WP_005350962.1
COORDINATES: protein motif:HMM:NF015448.2
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
phenylalanine--tRNA ligase beta subunit-related protein
COORDINATES: protein motif:HMM:TIGR02824.1
COORDINATES: protein motif:HMM:NF022537.2
COORDINATES: protein motif:HMM:NF014708.2
COORDINATES: similar to AA sequence:RefSeq:WP_000531189.1
glutathione S-transferase family protein
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: similar to AA sequence:RefSeq:WP_003227757.1
COORDINATES: similar to AA sequence:RefSeq:WP_015880100.1
COORDINATES: similar to AA sequence:RefSeq:WP_015880101.1
COORDINATES: protein motif:HMM:NF008688.0
GO:0035460 - L-ascorbate 6-phosphate lactonase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0019854 - L-ascorbic acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015880104.1
COORDINATES: similar to AA sequence:RefSeq:WP_001959375.1
COORDINATES: similar to AA sequence:RefSeq:WP_016292990.1
COORDINATES: similar to AA sequence:RefSeq:WP_015880107.1
3-keto-L-gulonate-6-phosphate decarboxylase UlaD
COORDINATES: similar to AA sequence:RefSeq:WP_015880209.1
COORDINATES: similar to AA sequence:RefSeq:WP_015880208.1
acyl-[ACP]--phospholipid O-acyltransferase
COORDINATES: protein motif:HMM:NF016211.2
COORDINATES: protein motif:HMM:NF024809.2
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010676152.1
COORDINATES: similar to AA sequence:RefSeq:WP_005893603.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0004368 - glycerol-3-phosphate dehydrogenase (quinone) activity [Evidence IEA]
GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]; GO:0046174 - polyol catabolic process [Evidence IEA]
anaerobic glycerol-3-phosphate dehydrogenase subunit A
COORDINATES: protein motif:HMM:NF003720.0
glycerol-3-phosphate dehydrogenase subunit GlpB
COORDINATES: similar to AA sequence:RefSeq:WP_005352457.1
GO:0004368 - glycerol-3-phosphate dehydrogenase (quinone) activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: similar to AA sequence:RefSeq:WP_019839466.1
COORDINATES: similar to AA sequence:RefSeq:WP_005892574.1
COORDINATES: similar to AA sequence:RefSeq:WP_000953322.1
COORDINATES: similar to AA sequence:RefSeq:WP_005355661.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00636.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016350442.1
COORDINATES: protein motif:HMM:TIGR03902.1
COORDINATES: similar to AA sequence:RefSeq:WP_019444697.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005351163.1
lipopolysaccharide assembly protein LapB
COORDINATES: similar to AA sequence:RefSeq:WP_005315045.1
lipopolysaccharide assembly protein LapA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005355687.1
COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1
COORDINATES: similar to AA sequence:RefSeq:WP_014292810.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011706951.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934833.1
GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012503.2
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF024996.2
COORDINATES: protein motif:HMM:NF024703.2
COORDINATES: protein motif:HMM:NF015956.2
GO:0046914 - transition metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF007105.0
COORDINATES: protein motif:HMM:NF008619.0
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: similar to AA sequence:RefSeq:WP_003359266.1
heavy metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011898661.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004657166.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014292344.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013390.2
GO:0004109 - coproporphyrinogen oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005334181.1
COORDINATES: similar to AA sequence:RefSeq:WP_011898593.1
COORDINATES: similar to AA sequence:RefSeq:WP_011705220.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024248.2
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010673478.1
COORDINATES: similar to AA sequence:RefSeq:WP_005897172.1
COORDINATES: similar to AA sequence:RefSeq:WP_001036746.1
COORDINATES: similar to AA sequence:RefSeq:WP_015878624.1
COORDINATES: similar to AA sequence:RefSeq:WP_015878625.1
COORDINATES: similar to AA sequence:RefSeq:WP_017412896.1
COORDINATES: similar to AA sequence:RefSeq:WP_005350994.1
transglutaminase-like cysteine peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_017780771.1
GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005353790.1
COORDINATES: similar to AA sequence:RefSeq:WP_005353788.1
COORDINATES: similar to AA sequence:RefSeq:WP_011898784.1
COORDINATES: protein motif:HMM:NF016107.2
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: protein motif:HMM:NF019542.2
COORDINATES: similar to AA sequence:RefSeq:WP_005325158.1
COORDINATES: protein motif:HMM:NF025674.2
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF024909.2
COORDINATES: protein motif:HMM:NF024973.2
COORDINATES: similar to AA sequence:RefSeq:WP_016350826.1
COORDINATES: protein motif:HMM:NF023287.2
COORDINATES: protein motif:HMM:NF009381.0
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005904289.1
COORDINATES: similar to AA sequence:RefSeq:WP_017778550.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: protein motif:HMM:NF012717.2
COORDINATES: similar to AA sequence:RefSeq:WP_000236330.1
COORDINATES: protein motif:HMM:TIGR01962.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005722.0
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: protein motif:HMM:NF010120.0
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: protein motif:HMM:TIGR01973.1
GO:0006120 - mitochondrial electron transport, NADH to ubiquinone [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoG
COORDINATES: similar to AA sequence:RefSeq:WP_005314900.1
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: protein motif:HMM:NF004536.0
NADH-quinone oxidoreductase subunit NuoI
COORDINATES: protein motif:HMM:NF012709.2
COORDINATES: protein motif:HMM:NF004320.0
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: protein motif:HMM:NF005141.0
COORDINATES: protein motif:HMM:TIGR01972.1
COORDINATES: protein motif:HMM:NF012581.2
COORDINATES: protein motif:HMM:NF022661.2
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005314661.1
GO:0015171 - amino acid transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014324.2
COORDINATES: protein motif:HMM:NF008294.1
DNA-binding transcriptional activator PunR
COORDINATES: protein motif:HMM:NF008270.1
GO:1990961 - xenobiotic detoxification by transmembrane export across the plasma membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF014895.2
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012729443.1
COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1
COORDINATES: protein motif:HMM:NF006378.0
GO:0003984 - acetolactate synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0034077 - butanediol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005329462.1
COORDINATES: similar to AA sequence:RefSeq:WP_010376933.1
TusE/DsrC/DsvC family sulfur relay protein
COORDINATES: protein motif:HMM:NF033520.1
COORDINATES: similar to AA sequence:RefSeq:WP_005904176.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0004326 - tetrahydrofolylpolyglutamate synthase activity [Evidence IEA]
bifunctional tetrahydrofolate synthase/dihydrofolate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_005310570.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_009143127.1
COORDINATES: protein motif:HMM:TIGR03505.1
COORDINATES: similar to AA sequence:RefSeq:WP_016351142.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005352768.1
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_005345985.1
COORDINATES: similar to AA sequence:RefSeq:WP_017779965.1
GO:0016645 - oxidoreductase activity, acting on the CH-NH group of donors [Evidence IEA]; GO:0004808 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity [Evidence IEA]
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
COORDINATES: protein motif:HMM:NF017816.2
bifunctional metallophosphatase/5'-nucleotidase
COORDINATES: similar to AA sequence:RefSeq:WP_012729579.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019933922.1
COORDINATES: similar to AA sequence:RefSeq:WP_014292731.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_000415199.1
COORDINATES: similar to AA sequence:RefSeq:WP_019933924.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014292733.1
GO:0008689 - 3-demethylubiquinone-9 3-O-methyltransferase activity [Evidence IEA]
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG
COORDINATES: protein motif:HMM:TIGR01788.1
GO:0004351 - glutamate decarboxylase activity [Evidence IEA]
GO:0006540 - glutamate decarboxylation to succinate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001631066.1
COORDINATES: protein motif:HMM:NF006509.0
COORDINATES: similar to AA sequence:RefSeq:WP_019933620.1
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014291679.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934391.1
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017781865.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit F
COORDINATES: similar to AA sequence:RefSeq:WP_005349128.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_005303545.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_011899002.1
Na(+)-translocating NADH-quinone reductase subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_005303550.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_017784037.1
Na(+)-translocating NADH-quinone reductase subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_005343682.1
BolA/IbaG family iron-sulfur metabolism protein
COORDINATES: similar to AA sequence:RefSeq:WP_012729026.1
COORDINATES: similar to AA sequence:RefSeq:WP_017781863.1
COORDINATES: similar to AA sequence:RefSeq:WP_005338636.1
COORDINATES: protein motif:HMM:NF012698.2
COORDINATES: similar to AA sequence:RefSeq:WP_012729115.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: protein motif:HMM:NF024855.2
COORDINATES: protein motif:HMM:TIGR02521.1
type IV pilus biogenesis/stability protein PilW
COORDINATES: similar to AA sequence:RefSeq:WP_017780039.1
bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: similar to AA sequence:RefSeq:WP_011898749.1
COORDINATES: similar to AA sequence:RefSeq:WP_002222987.1
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: protein motif:HMM:NF014411.2
COORDINATES: protein motif:HMM:NF012936.2
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: protein motif:HMM:NF015297.2
COORDINATES: protein motif:HMM:NF015013.2
COORDINATES: protein motif:HMM:NF016239.2
COORDINATES: similar to AA sequence:RefSeq:WP_005409295.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011705639.1
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
GO:0019538 - protein metabolic process [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1
COORDINATES: similar to AA sequence:RefSeq:WP_019384153.1
COORDINATES: protein motif:HMM:NF012242.2
COORDINATES: similar to AA sequence:RefSeq:WP_005346699.1
GO:0051087 - chaperone binding [Evidence IEA]
GO:0097428 - protein maturation by iron-sulfur cluster transfer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016537756.1
iron-sulfur cluster assembly protein IscA
COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1
COORDINATES: similar to AA sequence:RefSeq:WP_005310403.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0044571 - [2Fe-2S] cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017411386.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]
Fe-S cluster assembly transcriptional regulator IscR
COORDINATES: similar to AA sequence:RefSeq:WP_014291784.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0008173 - RNA methyltransferase activity [Evidence IEA]
tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ
COORDINATES: similar to AA sequence:RefSeq:WP_005344837.1
COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1
COORDINATES: similar to AA sequence:RefSeq:WP_005355477.1
COORDINATES: similar to AA sequence:RefSeq:WP_005303827.1
COORDINATES: similar to AA sequence:RefSeq:WP_005333894.1
COORDINATES: protein motif:HMM:TIGR00711.1
COORDINATES: protein motif:HMM:NF012739.2
lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_011705627.1
COORDINATES: similar to AA sequence:RefSeq:WP_005899990.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011705625.1
COORDINATES: similar to AA sequence:RefSeq:WP_005527555.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879097.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005299728.1
GO:0051075 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: protein motif:HMM:NF024770.2
COORDINATES: protein motif:HMM:NF012475.2
GH32 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011706777.1
sucrose-specific PTS transporter subunit IIBC
COORDINATES: similar to AA sequence:RefSeq:WP_011706778.1
nucleoside triphosphate pyrophosphohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011071537.1
hydrogen peroxide-inducible genes activator
COORDINATES: similar to AA sequence:RefSeq:WP_011705411.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03358.1
COORDINATES: protein motif:HMM:TIGR03355.1
COORDINATES: protein motif:HMM:NF022984.2
type VI secretion system tube protein IglC
COORDINATES: protein motif:HMM:NF041243.1
type VI secretion system baseplate protein IglJ
COORDINATES: protein motif:HMM:NF041244.1
type VI secretion system protein IglI family protein
COORDINATES: protein motif:HMM:NF041246.1
type VI secretion system baseplate subunit TssF/IglH
COORDINATES: protein motif:HMM:NF025472.2
COORDINATES: protein motif:HMM:NF041249.1
COORDINATES: protein motif:HMM:NF041245.1
type VI secretion system lipoprotein IglE
COORDINATES: similar to AA sequence:RefSeq:WP_005906105.1
COORDINATES: protein motif:HMM:NF024423.2
COORDINATES: protein motif:HMM:NF024319.2
COORDINATES: similar to AA sequence:RefSeq:WP_014290738.1
GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005299591.1
COORDINATES: similar to AA sequence:RefSeq:WP_010674247.1
COORDINATES: protein motif:HMM:NF025167.2
nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: similar to AA sequence:RefSeq:WP_014291654.1
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: similar to AA sequence:RefSeq:WP_017779478.1
COORDINATES: similar to AA sequence:RefSeq:WP_016351827.1
ExeM/NucH family extracellular endonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_005327863.1
COORDINATES: similar to AA sequence:RefSeq:WP_005308949.1
COORDINATES: similar to AA sequence:RefSeq:WP_013723619.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1
COORDINATES: similar to AA sequence:RefSeq:WP_005352980.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: similar to AA sequence:RefSeq:WP_005333903.1
COORDINATES: protein motif:HMM:NF004356.0
GO:0008681 - 2-octaprenyl-6-methoxyphenol hydroxylase activity [Evidence IEA]; GO:0071949 - FAD binding [Evidence IEA]; GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
2-octaprenyl-6-methoxyphenyl hydroxylase
COORDINATES: protein motif:HMM:NF019500.2
COORDINATES: similar to AA sequence:RefSeq:WP_005317609.1
COORDINATES: protein motif:HMM:NF014068.2
COORDINATES: similar to AA sequence:RefSeq:WP_014293198.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0008853 - exodeoxyribonuclease III activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01887.1
GO:0016805 - dipeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
Sapep family Mn(2+)-dependent dipeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_005906871.1
30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
COORDINATES: similar to AA sequence:RefSeq:WP_010973403.1
COORDINATES: similar to AA sequence:RefSeq:WP_017412359.1
GO:0016805 - dipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018794.2
COORDINATES: similar to AA sequence:RefSeq:WP_010634697.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018485.2
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: protein motif:HMM:NF015875.2
COORDINATES: similar to AA sequence:RefSeq:WP_005353713.1
pyruvate formate lyase 1-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_016350517.1
COORDINATES: protein motif:HMM:NF016132.2
COORDINATES: similar to AA sequence:RefSeq:WP_014291599.1
COORDINATES: similar to AA sequence:RefSeq:WP_005311606.1
GO:0016407 - acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019194.2
COORDINATES: similar to AA sequence:RefSeq:WP_017779442.1
COORDINATES: protein motif:HMM:NF014335.2
COORDINATES: similar to AA sequence:RefSeq:WP_005336043.1
COORDINATES: protein motif:HMM:NF012587.2
COORDINATES: similar to AA sequence:RefSeq:WP_000702755.1
GO:0006528 - asparagine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011706601.1
COORDINATES: protein motif:HMM:NF008649.0
signal transduction histidine-protein kinase/phosphatase UhpB
COORDINATES: similar to AA sequence:RefSeq:WP_000936566.1
COORDINATES: similar to AA sequence:RefSeq:WP_005334609.1
COORDINATES: similar to AA sequence:RefSeq:WP_000164218.1
capsular polysaccharide biosynthesis protein; catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_001105504.1
COORDINATES: similar to AA sequence:RefSeq:WP_016349508.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019934233.1
COORDINATES: similar to AA sequence:RefSeq:WP_017411581.1
GO:0048001 - erythrose-4-phosphate dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014292148.1
COORDINATES: similar to AA sequence:RefSeq:WP_017778456.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014273.2
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014292020.1
COORDINATES: similar to AA sequence:RefSeq:WP_012728915.1
COORDINATES: similar to AA sequence:RefSeq:WP_010672920.1
COORDINATES: protein motif:HMM:NF013633.2
COORDINATES: similar to AA sequence:RefSeq:WP_005315988.1
COORDINATES: similar to AA sequence:RefSeq:WP_010673866.1
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017785229.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004363 - glutathione synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005316953.1
COORDINATES: similar to AA sequence:RefSeq:WP_010673863.1
COORDINATES: similar to AA sequence:RefSeq:WP_019446731.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005899120.1
COORDINATES: similar to AA sequence:RefSeq:WP_012729120.1
COORDINATES: similar to AA sequence:RefSeq:WP_005310436.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005356025.1
outer membrane protein assembly factor BamB
COORDINATES: protein motif:HMM:NF021492.2
COORDINATES: similar to AA sequence:RefSeq:WP_014291800.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF022511.2
COORDINATES: similar to AA sequence:RefSeq:WP_012728672.1
COORDINATES: protein motif:HMM:NF012579.2
COORDINATES: similar to AA sequence:RefSeq:WP_005337716.1
COORDINATES: similar to AA sequence:RefSeq:WP_005334608.1
COORDINATES: protein motif:HMM:NF003877.0
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
manganese-dependent inorganic pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_016348946.1
COORDINATES: protein motif:HMM:NF025423.2
COORDINATES: similar to AA sequence:RefSeq:WP_015573757.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
iron-sulfur cluster assembly scaffold protein
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_020805010.1
COORDINATES: similar to AA sequence:RefSeq:WP_005299566.1
GO:0004106 - chorismate mutase activity [Evidence IEA]; GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0046417 - chorismate metabolic process [Evidence IEA]; GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
bifunctional chorismate mutase/prephenate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014293097.1
COORDINATES: similar to AA sequence:RefSeq:WP_011758790.1
GO:0030060 - L-malate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000074527.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019934930.1
GO:0002953 - 5'-deoxynucleotidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010634968.1
COORDINATES: protein motif:HMM:NF023390.2
COORDINATES: similar to AA sequence:RefSeq:WP_000076440.1
COORDINATES: protein motif:HMM:NF021362.2
COORDINATES: similar to AA sequence:RefSeq:WP_017411853.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01511.1
COORDINATES: similar to AA sequence:RefSeq:WP_005350586.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014291953.1
GO:0004413 - homoserine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019001338.1
GO:0004072 - aspartate kinase activity [Evidence IEA]; GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]; GO:0009067 - aspartate family amino acid biosynthetic process [Evidence IEA]
bifunctional aspartate kinase/homoserine dehydrogenase I
COORDINATES: similar to AA sequence:RefSeq:WP_014291951.1
COORDINATES: similar to AA sequence:RefSeq:WP_014292753.1
amino acid ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF023125.2
COORDINATES: similar to AA sequence:RefSeq:WP_005902917.1
two-component system response regulator ArcA
COORDINATES: similar to AA sequence:RefSeq:WP_017412231.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0042883 - cysteine transport [Evidence IEA]
cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
COORDINATES: similar to AA sequence:RefSeq:WP_005325857.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0034775 - glutathione transmembrane transport [Evidence IEA]
cysteine/glutathione ABC transporter ATP-binding protein/permease CydC
COORDINATES: similar to AA sequence:RefSeq:WP_005899134.1
COORDINATES: similar to AA sequence:RefSeq:WP_005357742.1
COORDINATES: protein motif:HMM:NF007215.0
COORDINATES: protein motif:HMM:NF012273.2
substrate binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010672575.1
COORDINATES: similar to AA sequence:RefSeq:WP_005298492.1
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: similar to AA sequence:RefSeq:WP_011898219.1
COORDINATES: similar to AA sequence:RefSeq:WP_011898220.1
LytTR family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013206.2
COORDINATES: protein motif:HMM:TIGR00066.1
COORDINATES: similar to AA sequence:RefSeq:WP_005321675.1
COORDINATES: protein motif:HMM:NF020873.2
COORDINATES: protein motif:HMM:NF016764.2
COORDINATES: similar to AA sequence:RefSeq:WP_019933618.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:NF021527.2
COORDINATES: similar to AA sequence:RefSeq:WP_005311843.1
COORDINATES: protein motif:HMM:NF020771.2
CerR family C-terminal domain-containing protein
phospholipase D-like domain-containing protein
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: similar to AA sequence:RefSeq:WP_012728617.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019934758.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934757.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934756.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934755.1
COORDINATES: protein motif:HMM:NF018408.2
COORDINATES: protein motif:HMM:NF015683.2
glutathionylspermidine synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_032489171.1
GO:0008800 - beta-lactamase activity [Evidence IEA]
GO:0030655 - beta-lactam antibiotic catabolic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00671.1
COORDINATES: protein motif:HMM:TIGR01821.1
GO:0003870 - 5-aminolevulinate synthase activity [Evidence IEA]
GO:0006783 - heme biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_005359002.1
COORDINATES: similar to AA sequence:RefSeq:WP_005314041.1
COORDINATES: similar to AA sequence:RefSeq:WP_015880141.1
COORDINATES: similar to AA sequence:RefSeq:WP_005347548.1
COORDINATES: similar to AA sequence:RefSeq:WP_012728732.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
iron-sulfur cluster-binding domain-containing protein
COORDINATES: protein motif:HMM:NF023128.2
COORDINATES: similar to AA sequence:RefSeq:WP_011705833.1
COORDINATES: protein motif:HMM:NF019123.2
COORDINATES: similar to AA sequence:RefSeq:WP_015879698.1
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: protein motif:HMM:TIGR03899.1
COORDINATES: similar to AA sequence:RefSeq:WP_017412682.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019934381.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF018431.2
COORDINATES: similar to AA sequence:RefSeq:WP_005906803.1
COORDINATES: similar to AA sequence:RefSeq:WP_012728616.1
COORDINATES: protein motif:HMM:NF013460.2
cytochrome b/b6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005348802.1
COORDINATES: similar to AA sequence:RefSeq:WP_016351466.1
COORDINATES: similar to AA sequence:RefSeq:WP_017785728.1
COORDINATES: protein motif:HMM:NF014376.2
COORDINATES: similar to AA sequence:RefSeq:WP_016350344.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005347531.1
COORDINATES: similar to AA sequence:RefSeq:WP_014291660.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879546.1
COORDINATES: similar to AA sequence:RefSeq:WP_017411993.1
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017411994.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005335622.1
COORDINATES: similar to AA sequence:RefSeq:WP_010675578.1
COORDINATES: protein motif:HMM:NF001989.1
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: similar to AA sequence:RefSeq:WP_011707288.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019000264.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_003444254.1
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001572339.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004457 - lactate dehydrogenase activity [Evidence IEA]
GO:0006089 - lactate metabolic process [Evidence IEA]
FMN-dependent L-lactate dehydrogenase LldD
COORDINATES: protein motif:HMM:NF013706.2
COORDINATES: protein motif:HMM:NF015482.2
COORDINATES: protein motif:HMM:NF021160.2
COORDINATES: protein motif:HMM:NF016759.2
type III secretion system translocon subunit SctE
COORDINATES: protein motif:HMM:NF013479.2
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: protein motif:HMM:TIGR01401.1
GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
type III secretion system export apparatus subunit SctT
COORDINATES: similar to AA sequence:RefSeq:WP_005464497.1
type III secretion system export apparatus subunit SctS
COORDINATES: similar to AA sequence:RefSeq:WP_000056367.1
GO:0030257 - type III protein secretion system complex [Evidence IEA]
type III secretion system export apparatus subunit SctR
COORDINATES: protein motif:HMM:TIGR02551.1
type III secretion system cytoplasmic ring protein SctQ
COORDINATES: similar to AA sequence:RefSeq:WP_003113545.1
GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001258231.1
EscV/YscV/HrcV family type III secretion system export apparatus protein
COORDINATES: protein motif:HMM:NF018858.2
TyeA family type III secretion system gatekeeper subunit
COORDINATES: protein motif:HMM:NF024723.2
COORDINATES: protein motif:HMM:TIGR02544.1
type III secretion inner membrane ring lipoprotein SctJ
COORDINATES: protein motif:HMM:NF028311.2
type III secretion system inner rod subunit SctI
COORDINATES: protein motif:HMM:NF018041.2
COORDINATES: similar to AA sequence:RefSeq:WP_000350226.1
type III secretion system needle filament subunit SctF
COORDINATES: protein motif:HMM:TIGR02501.1
EscE/YscE/SsaE family type III secretion system needle protein co-chaperone
COORDINATES: protein motif:HMM:TIGR02500.1
type III secretion system inner membrane ring subunit SctD
COORDINATES: similar to AA sequence:RefSeq:WP_019840887.1
EscC/YscC/HrcC family type III secretion system outer membrane ring protein
COORDINATES: protein motif:HMM:NF011874.0
COORDINATES: similar to AA sequence:RefSeq:WP_012728910.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014293665.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010456279.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017779101.1
3-isopropylmalate dehydratase small subunit
COORDINATES: protein motif:HMM:NF002982.0
COORDINATES: similar to AA sequence:RefSeq:WP_019841165.1
D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_019840631.1
transcription/translation regulatory transformer protein RfaH
COORDINATES: similar to AA sequence:RefSeq:WP_004144723.1
COORDINATES: protein motif:HMM:NF024682.2
COORDINATES: protein motif:HMM:TIGR01353.1
GO:0008832 - dGTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005892502.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
aerobic respiration two-component sensor histidine kinase ArcB
COORDINATES: similar to AA sequence:RefSeq:WP_019445097.1
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010634326.1
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
COORDINATES: protein motif:HMM:NF015164.2
GO:0048472 - threonine-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005353749.1
COORDINATES: similar to AA sequence:RefSeq:WP_005353745.1
COORDINATES: protein motif:HMM:TIGR02453.1
COORDINATES: protein motif:HMM:NF012601.2
COORDINATES: similar to AA sequence:RefSeq:WP_014291268.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019934437.1
COORDINATES: similar to AA sequence:RefSeq:WP_115586227.1
COORDINATES: similar to AA sequence:RefSeq:WP_005328964.1
COORDINATES: protein motif:HMM:NF024954.2
COORDINATES: similar to AA sequence:RefSeq:WP_005304404.1
iron-sulfur cluster insertion protein ErpA
COORDINATES: similar to AA sequence:RefSeq:WP_019446454.1
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014291263.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: protein motif:HMM:NF015438.2
hybrid-cluster NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF015642.2
COORDINATES: similar to AA sequence:RefSeq:WP_014292894.1
COORDINATES: protein motif:HMM:NF019982.2
COORDINATES: protein motif:HMM:NF021606.2
COORDINATES: protein motif:HMM:NF014228.2
COORDINATES: protein motif:HMM:NF015445.2
TRAP transporter substrate-binding protein
AraC family ligand binding domain-containing protein
COORDINATES: protein motif:HMM:NF024487.2
TM0106 family RecB-like putative nuclease
COORDINATES: protein motif:HMM:TIGR03491.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879340.1
COORDINATES: protein motif:HMM:NF019348.2
COORDINATES: protein motif:HMM:NF021622.2
COORDINATES: protein motif:HMM:NF024436.2
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: protein motif:HMM:NF013742.2
COORDINATES: similar to AA sequence:RefSeq:WP_016350994.1
peptide ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002219640.1
COORDINATES: similar to AA sequence:RefSeq:WP_016350995.1
COORDINATES: similar to AA sequence:RefSeq:WP_005315119.1
COORDINATES: similar to AA sequence:RefSeq:WP_020380561.1
COORDINATES: similar to AA sequence:RefSeq:WP_005333361.1
COORDINATES: similar to AA sequence:RefSeq:WP_005355518.1
COORDINATES: similar to AA sequence:RefSeq:WP_019935644.1
COORDINATES: similar to AA sequence:RefSeq:WP_019935646.1
COORDINATES: protein motif:HMM:NF005829.0
COORDINATES: protein motif:HMM:NF025033.2
COORDINATES: similar to AA sequence:RefSeq:WP_010674041.1
COORDINATES: similar to AA sequence:RefSeq:WP_005320933.1
COORDINATES: similar to AA sequence:RefSeq:WP_019445049.1
gluconate operon transcriptional repressor GntR
COORDINATES: similar to AA sequence:RefSeq:WP_012728458.1
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_015878875.1
GO:0004456 - phosphogluconate dehydratase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005328545.1
COORDINATES: similar to AA sequence:RefSeq:WP_019840070.1
GO:0015128 - gluconate transmembrane transporter activity [Evidence IEA]
GO:0035429 - gluconate transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014342.2
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1
DNA-binding transcriptional regulator Fis
COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019935914.1
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:NF013854.2
non-canonical purine NTP pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_017779188.1
COORDINATES: protein motif:HMM:NF012659.2
COORDINATES: similar to AA sequence:RefSeq:WP_019445519.1
COORDINATES: similar to AA sequence:RefSeq:WP_019445518.1
COORDINATES: similar to AA sequence:RefSeq:WP_004398740.1
amino acid ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF014794.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015879573.1
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005298038.1
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_010675404.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013180.2
COORDINATES: similar to AA sequence:RefSeq:WP_005892086.1
acetyl-CoA carboxylase carboxyl transferase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_019445225.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010634776.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015879165.1
GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005303438.1
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010456486.1
COORDINATES: similar to AA sequence:RefSeq:WP_005303442.1
COORDINATES: similar to AA sequence:RefSeq:WP_011705100.1
outer membrane protein assembly factor BamA
COORDINATES: similar to AA sequence:RefSeq:WP_017411622.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005351075.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070402 - NADPH binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_015879174.1
COORDINATES: similar to AA sequence:RefSeq:WP_011705096.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005312076.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010673404.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879178.1
COORDINATES: similar to AA sequence:RefSeq:WP_014293061.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934187.1
GO:0008773 - [protein-PII] uridylyltransferase activity [Evidence IEA]
GO:0018177 - protein uridylylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017411619.1
GO:0008666 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity [Evidence IEA]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005892033.1
COORDINATES: similar to AA sequence:RefSeq:NP_308490.1
COORDINATES: similar to AA sequence:RefSeq:WP_010673393.1
COORDINATES: similar to AA sequence:RefSeq:WP_014291878.1
COORDINATES: protein motif:HMM:NF023492.2
COORDINATES: protein motif:HMM:NF023171.2
COORDINATES: similar to AA sequence:RefSeq:WP_005349184.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005303498.1
COORDINATES: similar to AA sequence:RefSeq:WP_005338611.1
nucleotide 5'-monophosphate nucleosidase PpnN
COORDINATES: similar to AA sequence:RefSeq:WP_005358630.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005308064.1
FMN-binding glutamate synthase family protein
COORDINATES: protein motif:HMM:NF013224.2
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005330732.1
23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM
COORDINATES: similar to AA sequence:RefSeq:WP_014291862.1
COORDINATES: protein motif:HMM:NF024891.2
COORDINATES: protein motif:HMM:TIGR01692.1
GO:0008442 - 3-hydroxyisobutyrate dehydrogenase activity [Evidence IEA]
GO:0006574 - valine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005911759.1
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005298477.1
COORDINATES: protein motif:HMM:NF016161.2
COORDINATES: similar to AA sequence:RefSeq:WP_005351707.1
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019934342.1
COORDINATES: similar to AA sequence:RefSeq:WP_005317012.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00548.1
lipoprotein insertase outer membrane protein LolB
COORDINATES: similar to AA sequence:RefSeq:WP_010633223.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1
COORDINATES: similar to AA sequence:RefSeq:WP_005358721.1
GO:1904680 - peptide transmembrane transporter activity [Evidence IEA]
GO:0015833 - peptide transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017409166.1
COORDINATES: similar to AA sequence:RefSeq:WP_017781919.1
COORDINATES: similar to AA sequence:RefSeq:WP_005907894.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1
COORDINATES: similar to AA sequence:RefSeq:WP_005308123.1
COORDINATES: protein motif:HMM:NF016227.2
COORDINATES: similar to AA sequence:RefSeq:WP_000848659.1
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019935142.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019934350.1
COORDINATES: similar to AA sequence:RefSeq:WP_005894607.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_019934352.1
COORDINATES: similar to AA sequence:RefSeq:WP_005298260.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015879762.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family, and was characterized as belonging to a set of three proteins, at least one of which must be present for CorA to function; Derived by automated computational analysis using gene prediction method: Protein Homology.
CNNM family magnesium/cobalt transport protein CorC
COORDINATES: similar to AA sequence:RefSeq:WP_011898444.1
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: protein motif:HMM:NF018946.2
COORDINATES: similar to AA sequence:RefSeq:WP_005894625.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: similar to AA sequence:RefSeq:WP_005329819.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014291708.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017411988.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_017765125.1
COORDINATES: similar to AA sequence:RefSeq:WP_005298235.1
COORDINATES: similar to AA sequence:RefSeq:WP_005354120.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00413.1
COORDINATES: similar to AA sequence:RefSeq:WP_014291702.1
COORDINATES: similar to AA sequence:RefSeq:WP_010673756.1
COORDINATES: similar to AA sequence:RefSeq:WP_005317363.1
GO:0033819 - lipoyl(octanoyl) transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013723473.1
COORDINATES: protein motif:HMM:NF007664.0
two-component system sensor histidine kinase QseC
COORDINATES: similar to AA sequence:RefSeq:WP_003102236.1
COORDINATES: similar to AA sequence:RefSeq:WP_011707313.1
COORDINATES: similar to AA sequence:RefSeq:WP_005346516.1
COORDINATES: protein motif:HMM:NF017775.2
ABC transporter ATP-binding protein/permease
COORDINATES: similar to AA sequence:RefSeq:WP_005350725.1
COORDINATES: similar to AA sequence:RefSeq:WP_005350709.1
COORDINATES: similar to AA sequence:RefSeq:WP_019935959.1
GO:0048502 - ABC-type thiamine transporter activity [Evidence IEA]; GO:0030975 - thiamine binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0030974 - thiamine pyrophosphate transmembrane transport [Evidence IEA]; GO:0015888 - thiamine transport [Evidence IEA]
thiamine ABC transporter substrate binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005304384.1
GO:0048502 - ABC-type thiamine transporter activity [Evidence IEA]
thiamine/thiamine pyrophosphate ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_005908443.1
GO:0048502 - ABC-type thiamine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
thiamine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010634998.1
COORDINATES: similar to AA sequence:RefSeq:WP_005313847.1
1-acylglycerol-3-phosphate O-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005305310.1
GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1
GO:0045900 - negative regulation of translational elongation [Evidence IEA]
energy-dependent translational throttle protein EttA
COORDINATES: protein motif:HMM:NF007069.0
Zn(2+)-responsive transcriptional regulator
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: similar to AA sequence:RefSeq:WP_005315057.1
COORDINATES: similar to AA sequence:RefSeq:WP_005894035.1
COORDINATES: similar to AA sequence:RefSeq:WP_017780819.1
COORDINATES: similar to AA sequence:RefSeq:WP_016349012.1
COORDINATES: protein motif:HMM:NF012903.2
COORDINATES: similar to AA sequence:RefSeq:WP_017766667.1
COORDINATES: similar to AA sequence:RefSeq:WP_012728766.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934389.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024901.2
COORDINATES: protein motif:HMM:NF028042.2
COORDINATES: similar to AA sequence:RefSeq:WP_005348939.1
COORDINATES: similar to AA sequence:RefSeq:WP_005313450.1
GO:0043683 - type IV pilus assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF017388.2
COORDINATES: protein motif:HMM:NF038109.1
TapY2 family type IVa secretion system protein
COORDINATES: protein motif:HMM:NF023444.2
COORDINATES: protein motif:HMM:NF025699.2
pilus assembly PilX N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016352080.1
COORDINATES: similar to AA sequence:RefSeq:WP_012728623.1
COORDINATES: similar to AA sequence:RefSeq:WP_017765367.1
GO:0004115 - 3',5'-cyclic-AMP phosphodiesterase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012728620.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005894256.1
COORDINATES: protein motif:HMM:NF016362.2
COORDINATES: protein motif:HMM:NF016348.2
GO:0061024 - membrane organization [Evidence IEA]; GO:0010033 - response to organic substance [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005349338.1
GO:0042277 - peptide binding [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]; GO:0060274 - maintenance of stationary phase [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA]; GO:0050821 - protein stabilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005345847.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_005345832.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_005311698.1
GO:0008803 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity [Evidence IEA]
symmetrical bis(5'-nucleosyl)-tetraphosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_010965865.1
COORDINATES: similar to AA sequence:RefSeq:WP_011707142.1
COORDINATES: similar to AA sequence:RefSeq:WP_017784136.1
threonine/serine exporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005297956.1
COORDINATES: similar to AA sequence:RefSeq:WP_017763857.1
COORDINATES: similar to AA sequence:RefSeq:WP_015818156.1
COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1
COORDINATES: similar to AA sequence:RefSeq:WP_014291572.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879446.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019935307.1
GO:0045861 - negative regulation of proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005345798.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879449.1
COORDINATES: similar to AA sequence:RefSeq:YP_005224716.1
COORDINATES: similar to AA sequence:RefSeq:WP_019444887.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_005358304.1
GO:0032300 - mismatch repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005327261.1
COORDINATES: similar to AA sequence:RefSeq:WP_005304245.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005345781.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005340991.1
GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014291558.1
small ribosomal subunit biogenesis GTPase RsgA
COORDINATES: similar to AA sequence:RefSeq:WP_016351834.1
Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019445965.1
COORDINATES: similar to AA sequence:RefSeq:WP_017781600.1
COORDINATES: similar to AA sequence:RefSeq:WP_019935292.1
elongation factor P--(R)-beta-lysine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_019839564.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0022900 - electron transport chain [Evidence IEA]
fumarate reductase (quinol) flavoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015879534.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015879535.1
COORDINATES: similar to AA sequence:RefSeq:WP_005298330.1
COORDINATES: similar to AA sequence:RefSeq:WP_014291551.1
COORDINATES: protein motif:HMM:TIGR03821.1
GO:0072581 - protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine [Evidence IEA]
COORDINATES: protein motif:HMM:NF024215.2
COORDINATES: similar to AA sequence:RefSeq:WP_005899876.1
COORDINATES: similar to AA sequence:RefSeq:WP_005317097.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
succinylglutamate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_019446361.1
GO:0008791 - arginine N-succinyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019446360.1
COORDINATES: protein motif:HMM:NF014038.2
COORDINATES: similar to AA sequence:RefSeq:WP_014293590.1
COORDINATES: protein motif:HMM:TIGR04211.1
TIGR04211 family SH3 domain-containing protein
COORDINATES: protein motif:HMM:NF008869.0
GO:0003842 - 1-pyrroline-5-carboxylate dehydrogenase activity [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0004657 - proline dehydrogenase activity [Evidence IEA]
GO:0010133 - proline catabolic process to glutamate [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
PAS domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF012371.2
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF027851.2
COORDINATES: similar to AA sequence:RefSeq:WP_013723989.1
COORDINATES: similar to AA sequence:RefSeq:WP_009142433.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004810 - CCA tRNA nucleotidyltransferase [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001680 - tRNA 3'-terminal CCA addition [Evidence IEA]
multifunctional CCA addition/repair protein
COORDINATES: similar to AA sequence:RefSeq:WP_015879708.1
COORDINATES: similar to AA sequence:RefSeq:WP_010635977.1
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013346772.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_005318896.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_011235429.1
COORDINATES: similar to AA sequence:RefSeq:WP_005772128.1
COORDINATES: protein motif:HMM:NF013930.2
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: protein motif:HMM:NF019883.2
COORDINATES: protein motif:HMM:NF004208.0
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014950.2
COORDINATES: protein motif:HMM:TIGR01417.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005354408.1
GO:0004371 - glycerone kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011707690.1
COORDINATES: similar to AA sequence:RefSeq:WP_000374004.1
COORDINATES: similar to AA sequence:RefSeq:WP_016351228.1
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
COORDINATES: protein motif:HMM:NF023550.2
COORDINATES: protein motif:HMM:NF012478.2
glycine betaine ABC transporter substrate-binding protein
proline/glycine betaine ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_010734321.1
Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine, L-proline or other amino acids, choline, carnitine, etc. The substrate specificity is best determined from the substrate-binding subunit, rather than this subunit, as it interacts with the permease subunit and not with substrate directly; Derived by automated computational analysis using gene prediction method: Protein Homology.
glycine betaine/L-proline ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016350274.1
COORDINATES: protein motif:HMM:TIGR00435.1
COORDINATES: protein motif:HMM:NF012546.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: similar to AA sequence:RefSeq:WP_005348717.1
COORDINATES: similar to AA sequence:RefSeq:WP_005305132.1
LPS export ABC transporter permease LptG
COORDINATES: protein motif:HMM:TIGR04407.1
LPS export ABC transporter permease LptF
COORDINATES: similar to AA sequence:RefSeq:WP_014291381.1
COORDINATES: similar to AA sequence:RefSeq:WP_019838963.1
COORDINATES: similar to AA sequence:RefSeq:WP_010672958.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF008393.0
COORDINATES: similar to AA sequence:RefSeq:WP_019839866.1
COORDINATES: protein motif:HMM:NF007789.0
GO:0015173 - aromatic amino acid transmembrane transporter activity [Evidence IEA]
GO:0015801 - aromatic amino acid transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF006183.0
GO:0017113 - dihydropyrimidine dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006210 - thymine catabolic process [Evidence IEA]; GO:0006212 - uracil catabolic process [Evidence IEA]
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
COORDINATES: similar to AA sequence:RefSeq:WP_010673145.1
COORDINATES: similar to AA sequence:RefSeq:WP_005358167.1
COORDINATES: similar to AA sequence:RefSeq:WP_005323871.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_017410262.1
COORDINATES: similar to AA sequence:RefSeq:WP_005898250.1
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014292162.1
COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]; GO:0016817 - hydrolase activity, acting on acid anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012904449.1
COORDINATES: protein motif:HMM:NF023472.2
COORDINATES: similar to AA sequence:RefSeq:WP_010634933.1
COORDINATES: similar to AA sequence:RefSeq:WP_012728515.1
COORDINATES: similar to AA sequence:RefSeq:WP_005351804.1
GO:0008662 - 1-phosphofructokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008319.0
fused PTS fructose transporter subunit IIA/HPr protein
COORDINATES: protein motif:HMM:NF008452.0
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0009750 - response to fructose [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02227.1
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: protein motif:HMM:NF013841.2
COORDINATES: similar to AA sequence:RefSeq:WP_004810563.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:TIGR00974.1
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008171.0
GO:0042301 - phosphate ion binding [Evidence IEA]
GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS
COORDINATES: similar to AA sequence:RefSeq:WP_000091118.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
phosphate regulon transcriptional regulator PhoB
COORDINATES: similar to AA sequence:RefSeq:WP_010673472.1
GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
phosphate regulon sensor histidine kinase PhoR
COORDINATES: similar to AA sequence:RefSeq:WP_015879653.1
COORDINATES: similar to AA sequence:RefSeq:WP_010673829.1
GO:0008967 - phosphoglycolate phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015879656.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019933216.1
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
Dam family site-specific DNA-(adenine-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005909678.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005317117.1
COORDINATES: similar to AA sequence:RefSeq:WP_017785074.1
type IV pilus secretin PilQ family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017764999.1
COORDINATES: similar to AA sequence:RefSeq:WP_014293450.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879667.1
COORDINATES: similar to AA sequence:RefSeq:WP_005335023.1
COORDINATES: similar to AA sequence:RefSeq:WP_017781607.1
COORDINATES: similar to AA sequence:RefSeq:WP_005311821.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016349727.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005362528.1
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: similar to AA sequence:RefSeq:WP_017411205.1
COORDINATES: protein motif:HMM:TIGR00427.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879766.1
GO:0002943 - tRNA dihydrouridine synthesis [Evidence IEA]
tRNA dihydrouridine(20/20a) synthase DusA
COORDINATES: protein motif:HMM:NF016231.2
COORDINATES: similar to AA sequence:RefSeq:WP_014293468.1
sodium ion-translocating decarboxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_015878927.1
GO:0008948 - oxaloacetate decarboxylase activity [Evidence IEA]; GO:0015081 - sodium ion transmembrane transporter activity [Evidence IEA]
sodium-extruding oxaloacetate decarboxylase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_015879770.1
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010672822.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017412245.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014668.2
COORDINATES: similar to AA sequence:RefSeq:WP_014293474.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010672818.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879605.1
GO:0003994 - aconitate hydratase activity [Evidence IEA]
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_019445744.1
COORDINATES: protein motif:HMM:NF014500.2
COORDINATES: similar to AA sequence:RefSeq:WP_005308641.1
COORDINATES: similar to AA sequence:RefSeq:WP_001257846.1
COORDINATES: similar to AA sequence:RefSeq:WP_005313798.1
COORDINATES: similar to AA sequence:RefSeq:WP_005317957.1
COORDINATES: similar to AA sequence:RefSeq:WP_017411846.1
GO:0008812 - choline dehydrogenase activity [Evidence IEA]
GO:0019285 - glycine betaine biosynthetic process from choline [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005317966.1
GO:0008802 - betaine-aldehyde dehydrogenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012342.2
COORDINATES: protein motif:HMM:NF004207.0
COORDINATES: similar to AA sequence:RefSeq:WP_005900104.1
COORDINATES: similar to AA sequence:RefSeq:WP_005343368.1
COORDINATES: similar to AA sequence:RefSeq:WP_019933184.1
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019933183.1
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011704773.1
COORDINATES: similar to AA sequence:RefSeq:WP_000488386.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_005351720.1
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005351718.1
COORDINATES: similar to AA sequence:RefSeq:WP_017419803.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003747 - translation release factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007645602.1
GO:0008750 - NAD(P)+ transhydrogenase (AB-specific) activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_019839394.1
GO:0008750 - NAD(P)+ transhydrogenase (AB-specific) activity [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
COORDINATES: protein motif:HMM:NF017857.2
capsule biosynthesis GfcC family protein
COORDINATES: protein motif:HMM:NF022552.2
COORDINATES: protein motif:HMM:NF025268.2
COORDINATES: protein motif:HMM:TIGR01575.1
COORDINATES: protein motif:HMM:NF015560.2
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_005890733.1
COORDINATES: similar to AA sequence:RefSeq:WP_005318439.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005306465.1
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005890727.1
COORDINATES: similar to AA sequence:RefSeq:WP_000514417.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879507.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]; GO:0006591 - ornithine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000410832.1
GO:0016990 - arginine deiminase activity [Evidence IEA]
GO:0019546 - arginine deiminase pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005895409.1
COORDINATES: similar to AA sequence:RefSeq:WP_017411979.1
COORDINATES: similar to AA sequence:RefSeq:WP_005340461.1
COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1
COORDINATES: protein motif:HMM:NF014586.2
COORDINATES: protein motif:HMM:NF010588.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014631.2
COORDINATES: similar to AA sequence:RefSeq:WP_005313459.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_011704645.1
COORDINATES: similar to AA sequence:RefSeq:WP_014291445.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019445577.1
COORDINATES: similar to AA sequence:RefSeq:WP_005341357.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005345673.1
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_005345666.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: similar to AA sequence:RefSeq:WP_008844230.1
COORDINATES: similar to AA sequence:RefSeq:WP_019936053.1
COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011898348.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_019936058.1
COORDINATES: similar to AA sequence:RefSeq:WP_005357996.1
COORDINATES: similar to AA sequence:RefSeq:WP_005345631.1
GO:0004519 - endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005340412.1
isoamylase early set domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014291425.1
COORDINATES: protein motif:HMM:NF013725.2
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011704629.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010945696.1
COORDINATES: similar to AA sequence:RefSeq:WP_005308697.1
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013874.2
GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_004899156.1
COORDINATES: similar to AA sequence:RefSeq:WP_017899820.1
COORDINATES: protein motif:HMM:NF012925.2
COORDINATES: similar to AA sequence:RefSeq:WP_005347427.1
superinfection exclusion B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005314064.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005360279.1
COORDINATES: similar to AA sequence:RefSeq:WP_000047544.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879822.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011707697.1
COORDINATES: similar to AA sequence:RefSeq:WP_005339909.1
GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1
COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1
COORDINATES: similar to AA sequence:RefSeq:WP_019000481.1
COORDINATES: similar to AA sequence:RefSeq:WP_002210669.1
COORDINATES: protein motif:HMM:TIGR04179.1
RhlP (RHombo-target LipoProtein) is a family of predicted lipoproteins that, in general, co-occurs with a form of rhombosortase, and that has an apparent cleavage site for that enzyme, a GlyGly motif, near the C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF028537.1
phosphoethanolamine--lipid A transferase
COORDINATES: similar to AA sequence:RefSeq:WP_014292011.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879542.1
COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1
COORDINATES: similar to AA sequence:RefSeq:WP_009142509.1
COORDINATES: similar to AA sequence:RefSeq:WP_017787526.1
COORDINATES: protein motif:HMM:TIGR02009.1
beta-phosphoglucomutase family hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_005308917.1
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010635489.1
COORDINATES: similar to AA sequence:RefSeq:WP_005362538.1
COORDINATES: protein motif:HMM:NF015823.2
ABC-type transport auxiliary lipoprotein family protein
COORDINATES: protein motif:HMM:NF014523.2
COORDINATES: protein motif:HMM:TIGR00056.1
COORDINATES: similar to AA sequence:RefSeq:WP_011705540.1
COORDINATES: similar to AA sequence:RefSeq:WP_016350303.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010673115.1
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: protein motif:HMM:NF008648.0
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005904974.1
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017764895.1
COORDINATES: protein motif:HMM:NF037817.2
COORDINATES: similar to AA sequence:RefSeq:WP_005350328.1
GO:0030697 - S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity [Evidence IEA]
tRNA (uridine(54)-C5)-methyltransferase TrmA
COORDINATES: similar to AA sequence:RefSeq:WP_006686216.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934805.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879948.1
COORDINATES: similar to AA sequence:RefSeq:WP_005328123.1
COORDINATES: similar to AA sequence:RefSeq:WP_005890697.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005340756.1
GO:0008108 - UDP-glucose:hexose-1-phosphate uridylyltransferase activity [Evidence IEA]
galactose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005355534.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004335 - galactokinase activity [Evidence IEA]
GO:0046835 - carbohydrate phosphorylation [Evidence IEA]; GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010676022.1
GO:0004034 - aldose 1-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010635789.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014291175.1
COORDINATES: similar to AA sequence:RefSeq:NP_312886.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010676031.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1
GO:0008428 - ribonuclease inhibitor activity [Evidence IEA]
GO:0051252 - regulation of RNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005307594.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934796.1
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]; GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_005342056.1
GO:0008175 - tRNA methyltransferase activity [Evidence IEA]
tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL
COORDINATES: similar to AA sequence:RefSeq:WP_019446523.1
COORDINATES: similar to AA sequence:RefSeq:WP_017788296.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005331102.1
COORDINATES: protein motif:HMM:NF016248.2
GO:0008813 - chorismate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010635512.1
GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014070492.1
stress response translation initiation inhibitor YciH
COORDINATES: similar to AA sequence:RefSeq:WP_005360612.1
COORDINATES: similar to AA sequence:RefSeq:WP_005357320.1
rhomboid family intramembrane serine protease GlpG
COORDINATES: similar to AA sequence:RefSeq:WP_014291150.1
GO:0004792 - thiosulfate sulfurtransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1
met regulon transcriptional regulator MetJ
COORDINATES: similar to AA sequence:RefSeq:WP_019934482.1
GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
3'(2'),5'-bisphosphate nucleotidase CysQ
COORDINATES: similar to AA sequence:RefSeq:WP_010672527.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017783302.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008293.1
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005339666.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019934684.1
GO:0009168 - purine ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005332899.1
COORDINATES: similar to AA sequence:RefSeq:WP_019444989.1
GO:0008712 - ADP-glyceromanno-heptose 6-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014291138.1
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: similar to AA sequence:RefSeq:WP_005339516.1
GO:0008920 - lipopolysaccharide heptosyltransferase activity [Evidence IEA]
lipopolysaccharide heptosyltransferase II
COORDINATES: protein motif:HMM:NF013257.2
COORDINATES: similar to AA sequence:RefSeq:WP_019934499.1
GO:0016740 - transferase activity [Evidence IEA]
lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
COORDINATES: protein motif:HMM:NF002475.0
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012728259.1
COORDINATES: similar to AA sequence:RefSeq:WP_012728258.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934503.1
COORDINATES: similar to AA sequence:RefSeq:WP_005349448.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00577.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: similar to AA sequence:RefSeq:WP_013343654.1
COORDINATES: similar to AA sequence:RefSeq:WP_005321271.1
COORDINATES: similar to AA sequence:RefSeq:WP_016349240.1
COORDINATES: similar to AA sequence:RefSeq:WP_005897957.1
COORDINATES: similar to AA sequence:RefSeq:WP_017764965.1
COORDINATES: protein motif:HMM:NF014589.2
COORDINATES: similar to AA sequence:RefSeq:WP_014291089.1
COORDINATES: similar to AA sequence:RefSeq:WP_002852256.1
GO:0008199 - ferric iron binding [Evidence IEA]
GO:0006879 - cellular iron ion homeostasis [Evidence IEA]
COORDINATES: protein motif:HMM:NF023167.2
COORDINATES: similar to AA sequence:RefSeq:WP_000781983.1
COORDINATES: similar to AA sequence:RefSeq:WP_014290785.1
COORDINATES: similar to AA sequence:RefSeq:WP_014290964.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: protein motif:HMM:TIGR00540.1
COORDINATES: protein motif:HMM:NF016275.2
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:NF014641.2
COORDINATES: similar to AA sequence:RefSeq:WP_010672695.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013463.2
COORDINATES: similar to AA sequence:RefSeq:WP_005323676.1
COORDINATES: similar to AA sequence:RefSeq:WP_000594016.1
methionine ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:TIGR00363.1
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013050.2
COORDINATES: similar to AA sequence:RefSeq:WP_017409309.1
COORDINATES: similar to AA sequence:RefSeq:WP_019933812.1
COORDINATES: protein motif:HMM:NF012931.2
carbohydate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF001419.0
GO:0047134 - protein-disulfide reductase (NAD(P)) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022853.2
COORDINATES: protein motif:HMM:NF003560.1
COORDINATES: similar to AA sequence:RefSeq:WP_019445786.1
oxygen-independent coproporphyrinogen III oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_010672428.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005306946.1
GO:0008743 - L-threonine 3-dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017408964.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012728327.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004929703.1
COORDINATES: similar to AA sequence:RefSeq:WP_005893452.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_019935091.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
topoisomerase DNA-binding C4 zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012728385.1
COORDINATES: similar to AA sequence:RefSeq:WP_005893457.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013630.2
COORDINATES: similar to AA sequence:RefSeq:WP_012728382.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000004449.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005893467.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: similar to AA sequence:RefSeq:WP_004238605.1
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017412320.1
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014291040.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019934701.1
COORDINATES: similar to AA sequence:RefSeq:WP_014291036.1
GO:0004177 - aminopeptidase activity [Evidence IEA]
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011704287.1
COORDINATES: protein motif:HMM:NF022620.2
COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1
DeoR/GlpR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014292416.1
GO:0004368 - glycerol-3-phosphate dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005307794.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_005363118.1
COORDINATES: similar to AA sequence:RefSeq:WP_012728565.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005356063.1
COORDINATES: similar to AA sequence:RefSeq:WP_017766345.1
COORDINATES: protein motif:HMM:NF023724.2
COORDINATES: similar to AA sequence:RefSeq:WP_013572604.1
COORDINATES: protein motif:HMM:NF037930.2
COORDINATES: protein motif:HMM:NF008301.0
GO:0005355 - glucose transmembrane transporter activity [Evidence IEA]; GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO:1904659 - glucose transmembrane transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: protein motif:HMM:NF020967.2
COORDINATES: similar to AA sequence:RefSeq:WP_005306964.1
tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
COORDINATES: similar to AA sequence:RefSeq:WP_005307724.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934583.1
COORDINATES: similar to AA sequence:RefSeq:WP_005339987.1
COORDINATES: similar to AA sequence:RefSeq:WP_005900008.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011899191.1
COORDINATES: similar to AA sequence:RefSeq:WP_019000471.1
COORDINATES: similar to AA sequence:RefSeq:WP_010635236.1
COORDINATES: similar to AA sequence:RefSeq:WP_017410503.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0004362 - glutathione-disulfide reductase (NADPH) activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0006749 - glutathione metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005307102.1
COORDINATES: similar to AA sequence:RefSeq:WP_009144281.1
COORDINATES: similar to AA sequence:RefSeq:WP_002049209.1
COORDINATES: similar to AA sequence:RefSeq:WP_010672365.1
COORDINATES: similar to AA sequence:RefSeq:WP_014293221.1
COORDINATES: protein motif:HMM:NF014676.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_019002856.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: protein motif:HMM:NF016120.2
COORDINATES: protein motif:HMM:NF004976.0
GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012899.2
COORDINATES: protein motif:HMM:TIGR00657.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879194.1
GO:0008705 - methionine synthase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017780899.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023712.2
COORDINATES: similar to AA sequence:RefSeq:WP_005362708.1
COORDINATES: similar to AA sequence:RefSeq:WP_005351344.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO:0019632 - shikimate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02531.1
COORDINATES: protein motif:HMM:NF025879.2
COORDINATES: similar to AA sequence:RefSeq:WP_013723713.1
COORDINATES: similar to AA sequence:RefSeq:WP_005341264.1
COORDINATES: protein motif:HMM:NF021352.2
COORDINATES: similar to AA sequence:RefSeq:WP_013814780.1
COORDINATES: similar to AA sequence:RefSeq:WP_015880160.1
COORDINATES: similar to AA sequence:RefSeq:WP_000726424.1
COORDINATES: similar to AA sequence:RefSeq:WP_017412137.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017412136.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016243.2
COORDINATES: similar to AA sequence:RefSeq:WP_019444856.1
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: similar to AA sequence:RefSeq:WP_005907476.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019934127.1
COORDINATES: protein motif:HMM:NF014173.2
COORDINATES: similar to AA sequence:RefSeq:WP_019934899.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014157769.1
PLP-dependent cysteine synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005355344.1
COORDINATES: similar to AA sequence:RefSeq:WP_005357069.1
COORDINATES: similar to AA sequence:RefSeq:WP_005328874.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005349346.1
GO:0008894 - guanosine-5'-triphosphate,3'-diphosphate diphosphatase activity [Evidence IEA]
GO:0015974 - guanosine pentaphosphate catabolic process [Evidence IEA]
guanosine-5'-triphosphate,3'-diphosphate diphosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_011151397.1
COORDINATES: similar to AA sequence:RefSeq:WP_008073352.1
GO:0006662 - glycerol ether metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014290642.1
GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005349415.1
COORDINATES: similar to AA sequence:RefSeq:WP_016351612.1
COORDINATES: similar to AA sequence:RefSeq:WP_005351682.1
COORDINATES: similar to AA sequence:RefSeq:WP_005362223.1
COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1
GO:0003984 - acetolactate synthase activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
acetolactate synthase 2 catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014290966.1
COORDINATES: similar to AA sequence:RefSeq:WP_019934634.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005318219.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005351189.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005350567.1
COORDINATES: similar to AA sequence:RefSeq:WP_010675408.1
GO:0015498 - pantothenate:sodium symporter activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015887 - pantothenate transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF001159.1
COORDINATES: similar to AA sequence:RefSeq:WP_010673790.1
GO:0003920 - GMP reductase activity [Evidence IEA]
GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016349102.1
COORDINATES: similar to AA sequence:RefSeq:WP_010635398.1
COORDINATES: similar to AA sequence:RefSeq:WP_005356249.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010635648.1
COORDINATES: similar to AA sequence:RefSeq:WP_017411930.1
COORDINATES: similar to AA sequence:RefSeq:WP_014290912.1
COORDINATES: protein motif:HMM:NF012593.2
cation:dicarboxylase symporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_005314116.1
COORDINATES: similar to AA sequence:RefSeq:WP_005304437.1
COORDINATES: similar to AA sequence:RefSeq:WP_017787638.1
COORDINATES: similar to AA sequence:RefSeq:WP_005332190.1
COORDINATES: similar to AA sequence:RefSeq:WP_005363377.1
COORDINATES: similar to AA sequence:RefSeq:WP_005316475.1
COORDINATES: similar to AA sequence:RefSeq:WP_012728319.1
COORDINATES: similar to AA sequence:RefSeq:WP_012728321.1
COORDINATES: protein motif:HMM:NF004939.0
COORDINATES: similar to AA sequence:RefSeq:WP_016266853.1
COORDINATES: similar to AA sequence:RefSeq:WP_005913795.1
DNA-binding transcriptional regulator OxyR
COORDINATES: similar to AA sequence:RefSeq:WP_005315883.1
nitrous oxide-stimulated promoter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_001483142.1
COORDINATES: similar to AA sequence:RefSeq:WP_005347331.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005347333.1
COORDINATES: protein motif:HMM:NF009553.0
COORDINATES: similar to AA sequence:RefSeq:WP_015879923.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879922.1
GO:0008880 - glucuronate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005347341.1
COORDINATES: similar to AA sequence:RefSeq:WP_005345255.1
COORDINATES: similar to AA sequence:RefSeq:WP_005904906.1
COORDINATES: similar to AA sequence:RefSeq:WP_015879860.1
COORDINATES: similar to AA sequence:RefSeq:WP_008503456.1
COORDINATES: similar to AA sequence:RefSeq:WP_012728679.1
COORDINATES: similar to AA sequence:RefSeq:WP_015880021.1
COORDINATES: similar to AA sequence:RefSeq:WP_015880022.1
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015880024.1
Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26; Derived by automated computational analysis using gene prediction method: Protein Homology.
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016349144.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005353886.1
GO:0050415 - formimidoylglutamase activity [Evidence IEA]
GO:0019556 - histidine catabolic process to glutamate and formamide [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014291518.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012447.2
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015879197.1
COORDINATES: similar to AA sequence:RefSeq:WP_005353526.1
COORDINATES: similar to AA sequence:RefSeq:WP_005339997.1
COORDINATES: protein motif:HMM:NF012696.2
COORDINATES: protein motif:HMM:NF020476.2
COORDINATES: similar to AA sequence:RefSeq:WP_017778464.1
COORDINATES: similar to AA sequence:RefSeq:WP_000034825.1
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: similar to AA sequence:RefSeq:WP_014290914.1
COORDINATES: protein motif:HMM:NF028053.2
COORDINATES: protein motif:HMM:NF008051.0
GO:0004558 - alpha-1,4-glucosidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005325478.1
COORDINATES: similar to AA sequence:RefSeq:WP_005890616.1
TraR/DksA family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005328898.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
4-hydroxy-3-polyprenylbenzoate decarboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_005349331.1
COORDINATES: similar to AA sequence:RefSeq:WP_005308292.1
COORDINATES: similar to AA sequence:RefSeq:WP_000845567.1
COORDINATES: similar to AA sequence:RefSeq:WP_016349142.1
permease-like cell division protein FtsX
COORDINATES: similar to AA sequence:RefSeq:WP_019934565.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011704348.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_005342856.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: protein motif:HMM:NF018334.2
COORDINATES: protein motif:HMM:NF023520.2
COORDINATES: similar to AA sequence:RefSeq:WP_004244666.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
GO:0019358 - nicotinate nucleotide salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005351215.1
COORDINATES: protein motif:HMM:TIGR00712.1
GO:0015169 - glycerol-3-phosphate transmembrane transporter activity [Evidence IEA]
GO:0015794 - glycerol-3-phosphate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010633216.1
COORDINATES: protein motif:HMM:NF020950.2
COORDINATES: similar to AA sequence:RefSeq:WP_005344587.1
homocysteine S-methyltransferase family protein
COORDINATES: protein motif:HMM:NF006507.0
lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_001308284.1
COORDINATES: protein motif:HMM:NF007693.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: similar to AA sequence:RefSeq:WP_017410462.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_010672253.1
COORDINATES: protein motif:HMM:NF014015.2
COORDINATES: protein motif:HMM:NF013256.2
COORDINATES: protein motif:HMM:NF013577.2
COORDINATES: protein motif:HMM:NF017942.2
COORDINATES: protein motif:HMM:NF024979.2
COORDINATES: protein motif:HMM:NF013705.2
COORDINATES: similar to AA sequence:RefSeq:WP_008499668.1
COORDINATES: protein motif:HMM:NF017434.2
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_005356281.1
GO:0015496 - putrescine:ornithine antiporter activity [Evidence IEA]
GO:0015822 - ornithine transport [Evidence IEA]; GO:0015847 - putrescine transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF010092.0
COORDINATES: similar to AA sequence:RefSeq:WP_017411513.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0000902 - cell morphogenesis [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: similar to AA sequence:RefSeq:WP_019935693.1
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010117196.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018678429.1
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011074332.1
COORDINATES: similar to AA sequence:RefSeq:WP_005342351.1
COORDINATES: similar to AA sequence:RefSeq:WP_011707912.1
COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1
COORDINATES: similar to AA sequence:RefSeq:WP_004773235.1
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005307195.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_005326275.1
COORDINATES: similar to AA sequence:RefSeq:WP_019935682.1
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_005307187.1
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_005332019.1
COORDINATES: similar to AA sequence:RefSeq:WP_000091668.1
COORDINATES: similar to AA sequence:RefSeq:WP_001304728.1
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
COORDINATES: protein motif:HMM:NF023089.2
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: protein motif:HMM:NF039988.1
outer membrane lipoprotein carrier protein LolA
COORDINATES: similar to AA sequence:RefSeq:WP_005317781.1
COORDINATES: similar to AA sequence:RefSeq:WP_017781478.1
COORDINATES: similar to AA sequence:RefSeq:WP_010633044.1
COORDINATES: similar to AA sequence:RefSeq:WP_017784148.1
COORDINATES: similar to AA sequence:RefSeq:WP_005317803.1
COORDINATES: protein motif:HMM:NF013702.2
lysophospholipid acyltransferase family protein
COORDINATES: protein motif:HMM:NF025100.2
beta-ketoacyl synthase chain length factor
COORDINATES: similar to AA sequence:RefSeq:WP_017766371.1
COORDINATES: similar to AA sequence:RefSeq:WP_005347113.1
COORDINATES: similar to AA sequence:RefSeq:WP_005339743.1
COORDINATES: similar to AA sequence:RefSeq:WP_014290903.1
GO:0000166 - nucleotide binding [Evidence IEA]
phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013724233.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_009142936.1
GO:0032977 - membrane insertase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005319556.1
membrane protein insertion efficiency factor YidD
COORDINATES: similar to AA sequence:RefSeq:WP_005351552.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011508608.1