Nostoc flagelliforme CCNUN1 plasmid pNFSY01, complete sequence.
Bacteria; Cyanobacteriota; Cyanophyceae; Nostocales; Nostocaceae; Nostoc.
Genomic and transcriptomic insights into the survival of the subaerial cyanobacterium Nostoc flagelliforme in arid and exposed habitats
Submitted (08-NOV-2017) College of Life Sciences, Central China Normal University, Central China Normal University, Wuhan, Hubei 430079, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP024786.1.\nBacteria and source DNA available from the submitter.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: APR-2016\nAssembly Method :: HGAP3 v. v2.2.0\nExpected Final Version :: yes\nGenome Coverage :: 228.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/25/2022 05:48:29\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 9,763\nCDSs (total) :: 9,666\nGenes (coding) :: 8,943\nCDSs (with protein) :: 8,943\nGenes (RNA) :: 97\nrRNAs :: 6, 6, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 5 (5S, 16S, 23S)\ntRNAs :: 76\nncRNAs :: 4\nPseudo Genes (total) :: 723\nCDSs (without protein) :: 723\nPseudo Genes (ambiguous residues) :: 0 of 723\nPseudo Genes (frameshifted) :: 219 of 723\nPseudo Genes (incomplete) :: 556 of 723\nPseudo Genes (internal stop) :: 117 of 723\nPseudo Genes (multiple problems) :: 149 of 723\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_015186455.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015186454.1
COORDINATES: similar to AA sequence:RefSeq:WP_011666305.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF037060.2
COORDINATES: similar to AA sequence:RefSeq:WP_009547958.1
COORDINATES: similar to AA sequence:RefSeq:WP_015111171.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999525.1
COORDINATES: similar to AA sequence:RefSeq:WP_010994118.1
COORDINATES: similar to AA sequence:RefSeq:WP_012412834.1
COORDINATES: similar to AA sequence:RefSeq:WP_012412835.1
COORDINATES: similar to AA sequence:RefSeq:WP_012412836.1
COORDINATES: similar to AA sequence:RefSeq:WP_012412837.1
COORDINATES: similar to AA sequence:RefSeq:WP_017655400.1
COORDINATES: similar to AA sequence:RefSeq:WP_012413374.1
COORDINATES: protein motif:HMM:NF019493.2
COORDINATES: similar to AA sequence:RefSeq:WP_015217634.1
COORDINATES: protein motif:HMM:NF020290.2
GO:0016817 - hydrolase activity, acting on acid anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012413367.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017307421.1
plasmid mobilization relaxosome protein MobC
COORDINATES: similar to AA sequence:RefSeq:WP_006199191.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011330326.1
COORDINATES: protein motif:HMM:NF022452.2
COORDINATES: similar to AA sequence:RefSeq:WP_019488086.1
COORDINATES: similar to AA sequence:RefSeq:WP_019488173.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF036720.2