Klebsiella quasivariicola strain 08A119 plasmid pKqv_08A119_1.
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
A curated collection of Klebsiella metabolic models reveals variable substrate usage and gene essentiality
Submitted (04-OCT-2021) Infectious Diseases, Monash University, 85 Commercial Rd, Melbourne, VIC 3004, Australia
REFSEQ INFORMATION: The reference sequence is identical to\nCP084769.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 01-JAN-2021\nAssembly Method :: Trycycler; Medaka; Pilon v. 0.3.3; 1.3.3;\n 1.23\nAssembly Name :: Klebsiella quasivariicola 08A119\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50x\nSequencing Technology :: Minion (Oxford Nanopore) and NextSeq\n 500/550 (Illumina)\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/14/2022 05:09:23\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,691\nCDSs (total) :: 5,566\nGenes (coding) :: 5,380\nCDSs (with protein) :: 5,380\nGenes (RNA) :: 125\nrRNAs :: 9, 8, 8 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 8, 8 (5S, 16S, 23S)\ntRNAs :: 86\nncRNAs :: 14\nPseudo Genes (total) :: 186\nCDSs (without protein) :: 186\nPseudo Genes (ambiguous residues) :: 0 of 186\nPseudo Genes (frameshifted) :: 93 of 186\nPseudo Genes (incomplete) :: 99 of 186\nPseudo Genes (internal stop) :: 36 of 186\nPseudo Genes (multiple problems) :: 37 of 186\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##
COORDINATES: similar to AA sequence:RefSeq:NP_415107.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
Cu(+)/Ag(+) efflux RND transporter permease subunit SilA
COORDINATES: similar to AA sequence:RefSeq:WP_017146627.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB
COORDINATES: similar to AA sequence:RefSeq:WP_009654303.1
COORDINATES: similar to AA sequence:RefSeq:WP_001572989.1
Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC
COORDINATES: similar to AA sequence:RefSeq:WP_001572351.1
copper/silver response regulator transcription factor SilR
COORDINATES: similar to AA sequence:RefSeq:WP_003032875.1
copper/silver sensor histidine kinase SilS
COORDINATES: similar to AA sequence:RefSeq:WP_000790485.1
COORDINATES: similar to AA sequence:RefSeq:WP_000647571.1
COORDINATES: similar to AA sequence:RefSeq:WP_001568530.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013578374.1
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_001710756.1
S-4TM family putative pore-forming effector
COORDINATES: similar to AA sequence:RefSeq:WP_013578371.1
COORDINATES: similar to AA sequence:RefSeq:WP_017460058.1
COORDINATES: similar to AA sequence:RefSeq:WP_001486568.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_000015958.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229619.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229618.1
COORDINATES: similar to AA sequence:RefSeq:WP_000807689.1
COORDINATES: similar to AA sequence:RefSeq:NP_490541.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:YP_005229775.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229774.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_005229773.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229772.1
translesion error-prone DNA polymerase V autoproteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:YP_005229768.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229767.1
plasmid partitioning/stability family protein
COORDINATES: similar to AA sequence:RefSeq:YP_005229766.1
COORDINATES: similar to AA sequence:RefSeq:WP_004194745.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:NP_490548.1
COORDINATES: similar to AA sequence:RefSeq:NP_958723.1
COORDINATES: similar to AA sequence:RefSeq:WP_001568043.1
COORDINATES: similar to AA sequence:RefSeq:WP_009654051.1
COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229757.1
COORDINATES: similar to AA sequence:RefSeq:WP_009654058.1
COORDINATES: similar to AA sequence:RefSeq:NP_052655.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:YP_005229752.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229751.1
COORDINATES: similar to AA sequence:RefSeq:WP_000556067.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001311849.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_001244368.1
COORDINATES: similar to AA sequence:RefSeq:WP_020314934.1
COORDINATES: similar to AA sequence:RefSeq:WP_001562885.1
COORDINATES: similar to AA sequence:RefSeq:WP_001647051.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_019077272.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004118955.1
COORDINATES: similar to AA sequence:RefSeq:WP_009651962.1
COORDINATES: similar to AA sequence:RefSeq:WP_004152749.1
COORDINATES: similar to AA sequence:RefSeq:WP_001403164.1
COORDINATES: similar to AA sequence:RefSeq:WP_000556933.1
COORDINATES: similar to AA sequence:RefSeq:WP_020315406.1
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_001568107.1
conjugal transfer relaxosome DNA-binding protein TraM
COORDINATES: similar to AA sequence:RefSeq:YP_005229721.1
COORDINATES: similar to AA sequence:RefSeq:WP_000280363.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229719.1
type IV conjugative transfer system pilin TraA
COORDINATES: similar to AA sequence:RefSeq:YP_005229718.1
type IV conjugative transfer system protein TraL
COORDINATES: similar to AA sequence:RefSeq:YP_005229717.1
type IV conjugative transfer system protein TraE
COORDINATES: similar to AA sequence:RefSeq:WP_001568101.1
type-F conjugative transfer system secretin TraK
COORDINATES: similar to AA sequence:RefSeq:YP_005229715.1
F-type conjugal transfer pilus assembly protein TraB
COORDINATES: similar to AA sequence:RefSeq:WP_004152599.1
COORDINATES: similar to AA sequence:RefSeq:WP_016233168.1
type IV conjugative transfer system lipoprotein TraV
COORDINATES: similar to AA sequence:RefSeq:WP_009652471.1
COORDINATES: similar to AA sequence:RefSeq:WP_000556745.1
COORDINATES: similar to AA sequence:RefSeq:WP_004152594.1
COORDINATES: similar to AA sequence:RefSeq:WP_004144413.1
COORDINATES: similar to AA sequence:RefSeq:WP_004197816.1
COORDINATES: similar to AA sequence:RefSeq:WP_001568090.1
COORDINATES: similar to AA sequence:RefSeq:WP_020326931.1
type-F conjugative transfer system protein TrbI
COORDINATES: similar to AA sequence:RefSeq:WP_004966201.1
type-F conjugative transfer system protein TraW
COORDINATES: similar to AA sequence:RefSeq:WP_016479984.1
conjugal transfer pilus assembly protein TraU
COORDINATES: similar to AA sequence:RefSeq:WP_001568086.1
type-F conjugative transfer system pilin assembly protein TrbC
COORDINATES: similar to AA sequence:RefSeq:YP_005229701.1
type-F conjugative transfer system mating-pair stabilization protein TraN
COORDINATES: similar to AA sequence:RefSeq:WP_004152683.1
COORDINATES: similar to AA sequence:RefSeq:WP_013214030.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229697.1
type-F conjugative transfer system pilin assembly protein TraF
COORDINATES: similar to AA sequence:RefSeq:WP_009309875.1
type-F conjugative transfer system pilin chaperone TraQ
COORDINATES: similar to AA sequence:RefSeq:WP_004152688.1
type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB
COORDINATES: similar to AA sequence:RefSeq:WP_019725059.1
COORDINATES: similar to AA sequence:RefSeq:WP_004159274.1
conjugal transfer pilus assembly protein TraH
COORDINATES: similar to AA sequence:RefSeq:WP_020316632.1
conjugal transfer mating-pair stabilization protein TraG
COORDINATES: protein motif:HMM:NF022091.2
COORDINATES: similar to AA sequence:RefSeq:YP_005229690.1
conjugal transfer complement resistance protein TraT
COORDINATES: similar to AA sequence:RefSeq:WP_004152630.1
type IV conjugative transfer system coupling protein TraD
COORDINATES: similar to AA sequence:RefSeq:YP_005229687.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
conjugative transfer relaxase/helicase TraI
COORDINATES: similar to AA sequence:RefSeq:WP_020315135.1
type-F conjugative transfer system pilin acetylase TraX
COORDINATES: similar to AA sequence:RefSeq:WP_004152380.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019690428.1
COORDINATES: similar to AA sequence:RefSeq:WP_004118935.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004206591.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004118153.1
COORDINATES: similar to AA sequence:RefSeq:WP_017901244.1
COORDINATES: similar to AA sequence:RefSeq:WP_014837252.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004118922.1
COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1
IS6-like element IS26 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_000174402.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005249302.1
COORDINATES: similar to AA sequence:RefSeq:WP_020804634.1
COORDINATES: similar to AA sequence:RefSeq:WP_004178424.1
polysaccharide pyruvyl transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_001549957.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020326821.1
Tn3-like element Tn5403 family transposase
COORDINATES: similar to AA sequence:RefSeq:YP_005229675.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008069313.1
COORDINATES: similar to AA sequence:RefSeq:WP_013199731.1
COORDINATES: similar to AA sequence:RefSeq:WP_008455304.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013365374.1
COORDINATES: similar to AA sequence:RefSeq:WP_004118840.1
COORDINATES: similar to AA sequence:RefSeq:WP_004118229.1
COORDINATES: similar to AA sequence:RefSeq:WP_004118228.1
COORDINATES: similar to AA sequence:RefSeq:WP_004118837.1
COORDINATES: similar to AA sequence:RefSeq:WP_004152278.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016241890.1
COORDINATES: similar to AA sequence:RefSeq:WP_004118222.1
COORDINATES: similar to AA sequence:RefSeq:WP_015822284.1
COORDINATES: similar to AA sequence:RefSeq:NP_414876.1
transfers acetyl group from acetyl-CoA to the 6-hydroxyl of galactopyranosides; exact physiological role is unknown; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:NP_414877.1
COORDINATES: similar to AA sequence:RefSeq:NP_414878.1
COORDINATES: similar to AA sequence:RefSeq:NP_414879.3
DNA-binding transcriptional repressor LacI
COORDINATES: similar to AA sequence:RefSeq:NP_308426.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_000484486.1
COORDINATES: similar to AA sequence:RefSeq:WP_012637023.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000323730.1
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000196690.1
COORDINATES: similar to AA sequence:RefSeq:WP_000843382.1
COORDINATES: similar to AA sequence:RefSeq:WP_001513915.1
heat resistance system K+/H+ antiporter KefB-GI
COORDINATES: similar to AA sequence:RefSeq:WP_000786816.1
heat resistance system thioredoxin Trx-GI
COORDINATES: similar to AA sequence:RefSeq:WP_001166993.1
COORDINATES: similar to AA sequence:RefSeq:WP_001090783.1
heat resistance membrane protein HdeD-GI
COORDINATES: similar to AA sequence:RefSeq:WP_001721696.1
COORDINATES: similar to AA sequence:RefSeq:WP_001022486.1
COORDINATES: similar to AA sequence:RefSeq:WP_001275372.1
COORDINATES: similar to AA sequence:RefSeq:WP_012761381.1
COORDINATES: similar to AA sequence:RefSeq:WP_004081278.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000101613.1
heat shock survival AAA family ATPase ClpK
COORDINATES: similar to AA sequence:RefSeq:WP_003847761.1
COORDINATES: similar to AA sequence:RefSeq:WP_001568597.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017901360.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611483.1
IS3-like element ISEc52 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_000907654.1
COORDINATES: similar to AA sequence:RefSeq:WP_020803817.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1
COORDINATES: similar to AA sequence:RefSeq:WP_006688154.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611385.1
COORDINATES: similar to AA sequence:RefSeq:WP_001028172.1
COORDINATES: similar to AA sequence:RefSeq:YP_005228647.1
COORDINATES: similar to AA sequence:RefSeq:WP_004211921.1
COORDINATES: similar to AA sequence:RefSeq:YP_005228645.1
fimbria/pilus outer membrane usher protein
COORDINATES: similar to AA sequence:RefSeq:YP_005228644.1
COORDINATES: similar to AA sequence:RefSeq:WP_004867215.1
COORDINATES: similar to AA sequence:RefSeq:YP_005228642.1
COORDINATES: similar to AA sequence:RefSeq:WP_004149657.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004118575.1
GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076612056.1
ISL3-like element ISPpu12 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_013504665.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014702287.1
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001219642.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]
Cd(II)/Pb(II)-responsive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_076612066.1
GO:0015074 - DNA integration [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003032086.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611293.1
COORDINATES: similar to AA sequence:RefSeq:WP_003296361.1
COORDINATES: similar to AA sequence:RefSeq:WP_000589340.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611902.1
COORDINATES: similar to AA sequence:RefSeq:WP_012218041.1
COORDINATES: similar to AA sequence:RefSeq:WP_012540079.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004213599.1
COORDINATES: similar to AA sequence:RefSeq:WP_004152108.1
COORDINATES: similar to AA sequence:RefSeq:WP_004152107.1
COORDINATES: similar to AA sequence:RefSeq:WP_002208622.1
COORDINATES: similar to AA sequence:RefSeq:WP_004197807.1
COORDINATES: similar to AA sequence:RefSeq:WP_020805591.1
COORDINATES: similar to AA sequence:RefSeq:WP_004118694.1
COORDINATES: similar to AA sequence:RefSeq:WP_009310051.1
COORDINATES: similar to AA sequence:RefSeq:WP_012540106.1
COORDINATES: similar to AA sequence:RefSeq:WP_012669180.1
COORDINATES: similar to AA sequence:RefSeq:WP_009654315.1
COORDINATES: similar to AA sequence:RefSeq:WP_011906492.1
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_004152086.1
COORDINATES: similar to AA sequence:RefSeq:WP_000723069.1
copper resistance system metallochaperone PcoE
COORDINATES: similar to AA sequence:RefSeq:WP_001211179.1
copper resistance membrane spanning protein PcoS
transcriptional regulator responding to pcoS and pcoS*
COORDINATES: similar to AA sequence:RefSeq:WP_020239536.1
copper response regulator transcription factor PcoR
COORDINATES: similar to AA sequence:RefSeq:WP_004098940.1
copper resistance inner membrane protein PcoD
COORDINATES: similar to AA sequence:RefSeq:WP_004098941.1
copper resistance system metallochaperone PcoC
COORDINATES: similar to AA sequence:RefSeq:WP_001378118.1
copper resistance outer membrane transporter PcoB
COORDINATES: similar to AA sequence:RefSeq:WP_001480786.1
COORDINATES: similar to AA sequence:RefSeq:WP_004388333.1
COORDINATES: similar to AA sequence:RefSeq:WP_002436617.1
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000843499.1
COORDINATES: similar to AA sequence:RefSeq:WP_008322814.1
COORDINATES: similar to AA sequence:RefSeq:WP_002436620.1
COORDINATES: similar to AA sequence:RefSeq:WP_011711636.1
COORDINATES: similar to AA sequence:RefSeq:WP_005763473.1
COORDINATES: protein motif:HMM:NF015658.2
COORDINATES: protein motif:HMM:TIGR01494.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012905.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1
COORDINATES: similar to AA sequence:RefSeq:WP_016831304.1
GO:0015267 - channel activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004196778.1
COORDINATES: similar to AA sequence:RefSeq:WP_004152092.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_016151351.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016151352.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_000034287.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
arsenic metallochaperone ArsD family protein
COORDINATES: similar to AA sequence:RefSeq:WP_131199602.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015446 - ATPase-coupled arsenite transmembrane transporter activity [Evidence IEA]
GO:0071722 - detoxification of arsenic-containing substance [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004152096.1
COORDINATES: similar to AA sequence:RefSeq:NP_417960.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
glutaredoxin-dependent arsenate reductase
COORDINATES: similar to AA sequence:RefSeq:NP_312401.1
arsenite efflux transporter membrane subunit ArsB
COORDINATES: similar to AA sequence:RefSeq:WP_004152099.1
arsenite efflux transporter ATPase subunit ArsA
COORDINATES: similar to AA sequence:RefSeq:WP_000855179.1
arsenite efflux transporter metallochaperone ArsD
COORDINATES: similar to AA sequence:RefSeq:WP_001114073.1
As(III)-sensing metalloregulatory transcriptional repressor ArsR
COORDINATES: similar to AA sequence:RefSeq:WP_019706036.1
COORDINATES: similar to AA sequence:RefSeq:WP_004152103.1
COORDINATES: protein motif:HMM:NF024954.2
COORDINATES: similar to AA sequence:RefSeq:WP_013511600.1
COORDINATES: similar to AA sequence:RefSeq:WP_001567368.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009484843.1
COORDINATES: similar to AA sequence:RefSeq:WP_009653205.1
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:YP_005225844.1
GO:0004614 - phosphoglucomutase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
COORDINATES: similar to AA sequence:RefSeq:WP_004197672.1
GO:0008184 - glycogen phosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_005229247.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004099051.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004099052.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]
IS5-like element IS903B family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_076611787.1
COORDINATES: similar to AA sequence:RefSeq:WP_004118540.1
COORDINATES: similar to AA sequence:RefSeq:WP_004118538.1
COORDINATES: similar to AA sequence:RefSeq:WP_011977829.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004118534.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_001549953.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004118529.1
COORDINATES: similar to AA sequence:RefSeq:WP_008786570.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001549887.1
COORDINATES: similar to AA sequence:RefSeq:WP_014606052.1
COORDINATES: similar to AA sequence:RefSeq:WP_013572668.1
COORDINATES: similar to AA sequence:RefSeq:WP_019897068.1
COORDINATES: similar to AA sequence:RefSeq:WP_003100853.1
COORDINATES: similar to AA sequence:RefSeq:WP_003100856.1
COORDINATES: similar to AA sequence:RefSeq:WP_011809177.1
Uncharacterized conserved protein, contains double-stranded beta-helix domain
COORDINATES: similar to AA sequence:RefSeq:WP_003465043.1
COORDINATES: similar to AA sequence:RefSeq:WP_001293886.1
COORDINATES: similar to AA sequence:RefSeq:WP_001247892.1
COORDINATES: similar to AA sequence:RefSeq:WP_014834018.1
COORDINATES: similar to AA sequence:RefSeq:WP_014606053.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001549890.1
COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1
COORDINATES: similar to AA sequence:RefSeq:WP_000414383.1
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific [Evidence IEA]
Hg(II)-responsive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:YP_005229639.1
COORDINATES: similar to AA sequence:RefSeq:WP_011633167.1
GO:0045340 - mercury ion binding [Evidence IEA]
mercury resistance system periplasmic binding protein MerP
COORDINATES: similar to AA sequence:RefSeq:WP_000654684.1
mercury resistance system transport protein MerF
COORDINATES: similar to AA sequence:RefSeq:WP_016240396.1
GO:0016152 - mercury (II) reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001277466.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_005229645.1
COORDINATES: similar to AA sequence:RefSeq:WP_000904941.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229664.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229667.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229669.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229670.1
COORDINATES: protein motif:HMM:NF014442.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
incFII family plasmid replication initiator RepA
COORDINATES: similar to AA sequence:RefSeq:WP_012615301.1
COORDINATES: similar to AA sequence:RefSeq:WP_006122288.1
COORDINATES: similar to AA sequence:RefSeq:WP_004152294.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229681.1
COORDINATES: similar to AA sequence:RefSeq:WP_013365855.1
COORDINATES: similar to AA sequence:RefSeq:WP_010904246.1
COORDINATES: similar to AA sequence:RefSeq:WP_004178052.1
COORDINATES: similar to AA sequence:RefSeq:WP_009309884.1
COORDINATES: similar to AA sequence:RefSeq:WP_016831061.1
COORDINATES: similar to AA sequence:RefSeq:WP_004153030.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229692.1
COORDINATES: similar to AA sequence:RefSeq:WP_004144397.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229694.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229695.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229696.1
COORDINATES: similar to AA sequence:RefSeq:WP_016529362.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229699.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229700.1
COORDINATES: similar to AA sequence:RefSeq:WP_016831049.1
COORDINATES: similar to AA sequence:RefSeq:WP_016831048.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229703.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229704.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229705.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229706.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229707.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229708.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229710.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229711.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229712.1
COORDINATES: similar to AA sequence:RefSeq:WP_004152596.1
COORDINATES: similar to AA sequence:RefSeq:WP_004152597.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229714.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229716.1
COORDINATES: similar to AA sequence:RefSeq:WP_016241852.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229722.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229723.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229724.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229725.1
COORDINATES: similar to AA sequence:RefSeq:WP_020316683.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229728.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229729.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229731.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229732.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229737.1
COORDINATES: similar to AA sequence:RefSeq:WP_004182067.1
COORDINATES: similar to AA sequence:RefSeq:NP_052660.1
COORDINATES: protein motif:HMM:NF036604.2
COORDINATES: similar to AA sequence:RefSeq:YP_005229742.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229743.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229744.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229745.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229746.1
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:YP_005229747.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229748.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229750.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229753.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229755.1
COORDINATES: similar to AA sequence:RefSeq:WP_020317118.1
COORDINATES: similar to AA sequence:RefSeq:WP_020317122.1
COORDINATES: similar to AA sequence:RefSeq:YP_005226014.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_004178083.1
COORDINATES: similar to AA sequence:RefSeq:WP_004152715.1
COORDINATES: similar to AA sequence:RefSeq:WP_004182043.1
COORDINATES: similar to AA sequence:RefSeq:WP_000037307.1
COORDINATES: similar to AA sequence:RefSeq:WP_016246209.1
COORDINATES: protein motif:HMM:NF024169.2
COORDINATES: protein motif:HMM:NF015365.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611476.1
COORDINATES: similar to AA sequence:RefSeq:WP_000817038.1
ParB/RepB/Spo0J family plasmid partition protein
COORDINATES: similar to AA sequence:RefSeq:NP_052640.1
COORDINATES: similar to AA sequence:RefSeq:WP_017900946.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]
RepB family plasmid replication initiator protein
COORDINATES: similar to AA sequence:RefSeq:WP_012540156.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004152065.1
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_004197688.1
COORDINATES: protein motif:HMM:NF024202.2
COORDINATES: similar to AA sequence:RefSeq:WP_004178087.1
COORDINATES: similar to AA sequence:RefSeq:WP_016239947.1
COORDINATES: similar to AA sequence:RefSeq:WP_004119118.1
GO:0071705 - nitrogen compound transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611134.1
IS1-like element IS1X2 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_004152342.1
ISL3-like element ISKpn25 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_032489447.1