Paraburkholderia aromaticivorans strain BN5 plasmid pBN6, complete sequence.
type: Entry
definition: Paraburkholderia aromaticivorans strain BN5 plasmid pBN6, complete sequence.
sequence version: NZ_CP022996.1
sequence date: 2023-04-23
sequence: sequence
division: CON
label: NZ_CP022996.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN07510739
keyword: RefSeq
source: Paraburkholderia aromaticivorans
organism: Paraburkholderia aromaticivorans
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Paraburkholderia.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP022996.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 97.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/23/2023 04:56:50\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 8,144\nCDSs (total) :: 8,058\nGenes (coding) :: 7,860\nCDSs (with protein) :: 7,860\nGenes (RNA) :: 86\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 64\nncRNAs :: 4\nPseudo Genes (total) :: 198\nCDSs (without protein) :: 198\nPseudo Genes (ambiguous residues) :: 0 of 198\nPseudo Genes (frameshifted) :: 61 of 198\nPseudo Genes (incomplete) :: 157 of 198\nPseudo Genes (internal stop) :: 29 of 198\nPseudo Genes (multiple problems) :: 38 of 198\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 27494
topology: circular
so has quality: SO_0000988
location: 1..27494
location: region:1-27494:1
RO_0002162: 2026199

NZ_CP022996
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN07510739
type: BioSample
SIO_000068: biosample

1
title: Identification and genetic characteristics of simultaneous BTEX- and naphthalene-degrading Paraburkholderia sp. BN5 isolated from petroleum-contaminated soil
author: Lee, Y.
author: Jeon, C.O.
journal: Unpublished

2
title: Direct Submission
author: Lee, Y.
author: Jeon, C.O.
journal: Submitted (16-AUG-2017) Life Science, Chung-Ang University, 84 HeukSeok-Ro, Dongjak-Gu, Seoul 06974, Korea, Republic of

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27494:1
position: 27494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-27494:1:source
so part of: sequence
organism: Paraburkholderia aromaticivorans
mol type: genomic DNA
strain: BN5
isolation source: soil
type material: type strain of Paraburkholderia aromaticivorans
plasmid: pBN6
country: South Korea: Yangju, Gyeonggi-do
lat lon: 37.8407 N 127.0151 E
collection date: 2017-01-17

2026199
type: Taxonomy
SIO_000068: taxonomy

CJU94_RS40500
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40500
old locus tag: CJU94_40500
so part of: sequence
location: complement(join(27195..27494,1..15))
location: region:1-27494:-1
so has part: feature:1-15:-1:exon
so has part: feature:27195-27494:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27494:-1
position: 27494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-15:-1:exon

position:15:-1
position: 15
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27195-27494:-1:exon

position:27195:-1
position: 27195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CJU94_RS40500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40500
old locus tag: CJU94_40500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007586843.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4148 domain-containing protein
translation: MKSLIQAVVVAAALAAPVMSFAQSNQPVTRAQVRAELVQLEKAGYHVGDGDNATYPAQIQAAEAKVAAQNGAASGYGGVVSGSSDAGRPAVSKADWNAMYRGGN
SIO_010081: CJU94_RS40500
subclass of: SO_0000673
so part of: CJU94_RS40500
location: complement(join(27195..27494,1..15))
location: region:1-27494:-1
so has part: feature:1-15:-1:exon
so has part: feature:27195-27494:-1:exon

WP_095424064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-15:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27195-27494:-1:exon

CJU94_RS40505
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40505
old locus tag: CJU94_40505
so part of: sequence
location: complement(492..728)
location: region:492-728:-1
so has part: feature:492-728:-1:exon
subclass of: SO_0000010

position:492:-1
position: 492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728:-1
position: 728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492-728:-1:exon

CJU94_RS40505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40505
old locus tag: CJU94_40505
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKSEFVTAHRLPKGSVWRVKAELVGGTRLEGLAEPADALPRVRISPEAFQILKGPRNHGETIREVVERLIFEATGKP
SIO_010081: CJU94_RS40505
subclass of: SO_0000673
so part of: CJU94_RS40505
location: complement(492..728)
location: region:492-728:-1
so has part: feature:492-728:-1:exon

WP_095424038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492-728:-1:exon

CJU94_RS40510
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40510
old locus tag: CJU94_40510
so part of: sequence
location: complement(715..1614)
location: region:715-1614:-1
so has part: feature:715-1614:-1:exon
subclass of: SO_0000010

position:715:-1
position: 715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1614:-1
position: 1614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715-1614:-1:exon

CJU94_RS40510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40510
old locus tag: CJU94_40510
inference: COORDINATES: protein motif:HMM:NF024244.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase domain-containing protein
translation: MSKPTSNRPKSIEAKFMAAALHRGAATLTRQKMHTTFLAFAAHAKLGRYGPVDPPAVTEKQLRNYVASRIEAGITPRTIQNEVSHLRRALHGVGRGEWADALTNAQLGVPAGTRIGTGRVVSAAVLAQALERAAADTRAWIQLERCLGLRREEMIESHKSLKQWEATLARGQTFITVRHGTKGGRTRDTCIPPPYRERALAAIRAALEVVAGRRYLVDAPSDRAAKQQVHGRFASLGLKGTDSGHSLRRAFCRDNYEHYLSEGHSQKEALALCSRDLGHGEGRGRWVWNNYLRATYEQV
SIO_010081: CJU94_RS40510
subclass of: SO_0000673
so part of: CJU94_RS40510
location: complement(715..1614)
location: region:715-1614:-1
so has part: feature:715-1614:-1:exon

WP_095424039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:715-1614:-1:exon

CJU94_RS40520
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40520
old locus tag: CJU94_40520
so part of: sequence
location: 3170..3418
location: region:3170-3418:1
so has part: feature:3170-3418:1:exon
subclass of: SO_0000010

position:3170:1
position: 3170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3418:1
position: 3418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3170-3418:1:exon

CJU94_RS40520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40520
old locus tag: CJU94_40520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006480304.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVRGANGKMCLLTQQETDTGRECRSVRLQASGDGKSVILVETDERKVGIQREYRFEITTGELIALIRGRGAELPEEIIRSD
SIO_010081: CJU94_RS40520
subclass of: SO_0000673
so part of: CJU94_RS40520
location: 3170..3418
location: region:3170-3418:1
so has part: feature:3170-3418:1:exon

WP_095424065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3170-3418:1:exon

CJU94_RS40525
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40525
old locus tag: CJU94_40525
so part of: sequence
location: complement(3746..4132)
location: region:3746-4132:-1
so has part: feature:3746-4132:-1:exon
subclass of: SO_0000010

position:3746:-1
position: 3746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4132:-1
position: 4132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3746-4132:-1:exon

CJU94_RS40525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40525
old locus tag: CJU94_40525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012114589.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MNAPHILIVDADILVRTPLAEYLRECGYTVIEAVDSVEAQALLTDKPSAVDLVLADVGGEDRSGFALARWIRERFPDIRVILAGSIGGSVEKAVGLCEDGPALSKPYDHRVVLERIQRLRAARKGAPV
SIO_010081: CJU94_RS40525
subclass of: SO_0000673
so part of: CJU94_RS40525
location: complement(3746..4132)
location: region:3746-4132:-1
so has part: feature:3746-4132:-1:exon

WP_095424041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3746-4132:-1:exon

CJU94_RS40530
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40530
old locus tag: CJU94_40530
so part of: sequence
location: complement(4129..4500)
location: region:4129-4500:-1
so has part: feature:4129-4500:-1:exon
subclass of: SO_0000010

position:4129:-1
position: 4129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4500:-1
position: 4500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4129-4500:-1:exon

CJU94_RS40530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40530
old locus tag: CJU94_40530
inference: COORDINATES: protein motif:HMM:NF012301.2
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MAHILVAEDDVLVRMALAEVLRVEGFAVIEAGGAHDALTYIRAGGKVDLLFSDIQMPGVLDGQQLAELIGRDHPGIPVILTSGDTQPGASVPMALFIRKPYNIAHTITLFFSVLGLRPPESDS
SIO_010081: CJU94_RS40530
subclass of: SO_0000673
so part of: CJU94_RS40530
location: complement(4129..4500)
location: region:4129-4500:-1
so has part: feature:4129-4500:-1:exon

WP_157763934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4129-4500:-1:exon

CJU94_RS41285
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS41285
so part of: sequence
location: 4900..5073
location: region:4900-5073:1
so has part: feature:4900-5073:1:exon
subclass of: SO_0000010

position:4900:1
position: 4900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5073:1
position: 5073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4900-5073:1:exon

CJU94_RS41285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS41285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRIRPSGRRLDRPELISSMIDVCATDPALTKRVIRNVVERRKAQLAAMEAGATPAP
SIO_010081: CJU94_RS41285
subclass of: SO_0000673
so part of: CJU94_RS41285
location: 4900..5073
location: region:4900-5073:1
so has part: feature:4900-5073:1:exon

WP_157763935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4900-5073:1:exon

CJU94_RS40535
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40535
old locus tag: CJU94_40535
so part of: sequence
location: complement(5410..6912)
location: region:5410-6912:-1
so has part: feature:5410-6912:-1:exon
subclass of: SO_0000010

position:5410:-1
position: 5410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6912:-1
position: 6912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5410-6912:-1:exon

CJU94_RS40535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40535
old locus tag: CJU94_40535
EC number: 2.7.7.65
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007580198.1
GO function: GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor domain-containing diguanylate cyclase
translation: MSLPDSDKRLFALITSPRVVIGSGVILAFAMLSICAFILYGGRQDALEHASDSSRNTMLVIERDIERNIELYDLSLQAVVDGLYRPNVIALSAPLKREVLFDRAATAQYLGTIVATDAAGNIILDSRNGAPPTVNLANRNYFQVQRDHPAWGLYISPPQPSSLLGGDLALTLSRRITNPDGSFAGIVAGTVNLDYLHHLLSGLTLGPHGVMALVHTGGALIMRAPYNPKLIGHNLSGAGPFTKMSASSEGSFADTASIDGIRRIYAFKHLRGLPLIMVVAPAEQDIYAKWRMRAQKVVGVMILFSIAFVGLAVLLAYSLGKKAKAESTLRMLARTDSLTGLNNRRMLDQLLEQEWRRAVRTQRPLSILFVDLDRFKAYNDTYGHQAGDDVLAAVARCIARQIRRAGDITARYGGEEFVIVLPDTDSMGALAVAETLRQAVAHLAIEHAASELGRVTVSIGSASWQGRVADSVASVVKAADEALYQAKADGRNSVFGAILH
SIO_010081: CJU94_RS40535
subclass of: SO_0000673
so part of: CJU94_RS40535
location: complement(5410..6912)
location: region:5410-6912:-1
so has part: feature:5410-6912:-1:exon

WP_095424043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5410-6912:-1:exon

CJU94_RS40540
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40540
old locus tag: CJU94_40540
so part of: sequence
location: complement(7037..7381)
location: region:7037-7381:-1
so has part: feature:7037-7381:-1:exon
subclass of: SO_0000010

position:7037:-1
position: 7037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7381:-1
position: 7381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7037-7381:-1:exon

CJU94_RS40540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40540
old locus tag: CJU94_40540
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQRAATLLREQQWIDIFKVGTANVYRVNSGVFWTARADGRWASLRHIPLVQAEQHADALVTSTALGSDDPPEQARSTFTRAGTTLRENATAARRADGHFQPNDSSLLTLRRNPS
SIO_010081: CJU94_RS40540
subclass of: SO_0000673
so part of: CJU94_RS40540
location: complement(7037..7381)
location: region:7037-7381:-1
so has part: feature:7037-7381:-1:exon

WP_095424044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7037-7381:-1:exon

CJU94_RS40550
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40550
old locus tag: CJU94_40550
so part of: sequence
location: 7901..8281
location: region:7901-8281:1
so has part: feature:7901-8281:1:exon
subclass of: SO_0000010

position:7901:1
position: 7901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8281:1
position: 8281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7901-8281:1:exon

CJU94_RS40550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40550
old locus tag: CJU94_40550
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRMRAGDRSDPVLPPEIRSAFRDLYILSSCAAQLGGYGEEVPEPQWRALIDRTAKARTFFDRQVSFDRDALAAFRRFLLICEYVIELHLEGRACPPAVWREAGRLGREAYVYLDAGATGSTGAAI
SIO_010081: CJU94_RS40550
subclass of: SO_0000673
so part of: CJU94_RS40550
location: 7901..8281
location: region:7901-8281:1
so has part: feature:7901-8281:1:exon

WP_157763936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7901-8281:1:exon

CJU94_RS40555
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40555
old locus tag: CJU94_40555
so part of: sequence
location: 8352..8609
location: region:8352-8609:1
so has part: feature:8352-8609:1:exon
subclass of: SO_0000010

position:8352:1
position: 8352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8609:1
position: 8609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8352-8609:1:exon

CJU94_RS40555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40555
old locus tag: CJU94_40555
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPASKPVVARVNLDDRIICATFDQSTGRLRISEGAKVLHSLLPPDSWVAIASVSQSSGWGTRPSEADLGVYLRCCMSLQPSALAC
SIO_010081: CJU94_RS40555
subclass of: SO_0000673
so part of: CJU94_RS40555
location: 8352..8609
location: region:8352-8609:1
so has part: feature:8352-8609:1:exon

WP_095424046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8352-8609:1:exon

CJU94_RS40560
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40560
old locus tag: CJU94_40560
so part of: sequence
location: complement(8640..9041)
location: region:8640-9041:-1
so has part: feature:8640-9041:-1:exon
subclass of: SO_0000010

position:8640:-1
position: 8640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9041:-1
position: 9041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8640-9041:-1:exon

CJU94_RS40560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40560
old locus tag: CJU94_40560
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTGPARISAAVFSSAGRHRNLGPREKDFVRSLCKNRDSPIGQDDDMDQPRNLTAPFLCGDSTVWFSAYGFGWGYCAFALPAETVCEKLGAANTTPRQLMLAFELGRHHLLQTIANKALPATGERVTLSAADL
SIO_010081: CJU94_RS40560
subclass of: SO_0000673
so part of: CJU94_RS40560
location: complement(8640..9041)
location: region:8640-9041:-1
so has part: feature:8640-9041:-1:exon

WP_244221245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8640-9041:-1:exon

CJU94_RS40565
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40565
old locus tag: CJU94_40565
so part of: sequence
location: 9625..10119
location: region:9625-10119:1
so has part: feature:9625-10119:1:exon
subclass of: SO_0000010

position:9625:1
position: 9625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10119:1
position: 10119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9625-10119:1:exon

CJU94_RS40565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40565
old locus tag: CJU94_40565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004536408.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MESHDSTLSSIELRLMPASEDPVVQDPAFQSELRTFHGSLRAADVRFLLRARTFDALDAPGYALGEYVIKELGPAAIGVIGTAVGAWIAGRSGRKVRLKVGDIEAEARTIEEVEQLLQRARTMQAGQNYQNANPQSAPQQSGDKQQQSDFLERKDGRRRTVQGG
SIO_010081: CJU94_RS40565
subclass of: SO_0000673
so part of: CJU94_RS40565
location: 9625..10119
location: region:9625-10119:1
so has part: feature:9625-10119:1:exon

WP_095424048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9625-10119:1:exon

CJU94_RS40570
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40570
old locus tag: CJU94_40570
so part of: sequence
location: 10088..10360
location: region:10088-10360:1
so has part: feature:10088-10360:1:exon
subclass of: SO_0000010

position:10088:1
position: 10088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10360:1
position: 10360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10088-10360:1:exon

CJU94_RS40570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40570
old locus tag: CJU94_40570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006046744.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADVEQFKEDDLENNADGLMGGNRSDFMETLGEAVYAGIAGDQLDAIMAAYVTLQEVVEANVDSPDDQANEAIDRATDEFNEAVGRILGV
SIO_010081: CJU94_RS40570
subclass of: SO_0000673
so part of: CJU94_RS40570
location: 10088..10360
location: region:10088-10360:1
so has part: feature:10088-10360:1:exon

WP_208645454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10088-10360:1:exon

CJU94_RS40575
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40575
old locus tag: CJU94_40575
so part of: sequence
location: 10367..11326
location: region:10367-11326:1
so has part: feature:10367-11326:1:exon
subclass of: SO_0000010

position:10367:1
position: 10367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11326:1
position: 11326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10367-11326:1:exon

CJU94_RS40575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40575
old locus tag: CJU94_40575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019692619.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MNPTVPFTGAAPVPALVNAAGDRAGIRFVEFFASAIRNPHTRRAYARAASDFLMWCAGAGVSSITAVQPLHVAAWIERQTQTLSAPAVRQQLAAIRHLFDWLVTGQIVPHNPAASVRGPSHTVKKGRTPVLDAGEARQLLDRIDVSTPIGLRDRALIALMVFSFARVGAALAMRVDDVYVQQRRLWVRLREKGGKAHAMPCHHTLEAYLHAYLDGTGIGGDPKGPLFRTIARGTARLSTTPLPQANAYAMVRRRALAAGIGTAISNHTFRATGITAYLKNGGTLENAAAMANHASTRTTQLYDRRRDDVSLDEVERIHI
SIO_010081: CJU94_RS40575
subclass of: SO_0000673
so part of: CJU94_RS40575
location: 10367..11326
location: region:10367-11326:1
so has part: feature:10367-11326:1:exon

WP_095424049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10367-11326:1:exon

CJU94_RS40580
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40580
old locus tag: CJU94_40580
so part of: sequence
location: 11422..12207
location: region:11422-12207:1
so has part: feature:11422-12207:1:exon
subclass of: SO_0000010

position:11422:1
position: 11422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12207:1
position: 12207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11422-12207:1:exon

CJU94_RS40580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40580
old locus tag: CJU94_40580
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEKKTLPDINEANRIFWKEHDPMTVYPESIVGATTALEMYDTHGHGRFIWQAYQHFRAAEKHWPAYKKNLEDYTRQATGVSAPTVNDGVINALRDRVMSLIDGVFDDLLKLRGTSDDTGNQAIKRALKIDGRKAPVNSVARATDTQIVESMMTMYRHLASLQERYKGGRSQMPGPPPSSAKHIERIVARQTGAGMSKIDAVWRAYLANGQYAGYCRELVDHCKRVDKELRTVRCPRPKTRKRSPARPSADHVWRTTIKKT
SIO_010081: CJU94_RS40580
subclass of: SO_0000673
so part of: CJU94_RS40580
location: 11422..12207
location: region:11422-12207:1
so has part: feature:11422-12207:1:exon

WP_095424050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11422-12207:1:exon

CJU94_RS40585
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40585
old locus tag: CJU94_40585
so part of: sequence
location: complement(12840..13226)
location: region:12840-13226:-1
so has part: feature:12840-13226:-1:exon
subclass of: SO_0000010

position:12840:-1
position: 12840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13226:-1
position: 13226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12840-13226:-1:exon

CJU94_RS40585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40585
old locus tag: CJU94_40585
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDLVSSIQLSIEIVKKLRDLNDKLKDADFKMLLADLQGELADAKLEVVALKEKMADLLTKNADLTTKLETRTSEQPEPMEGGYKLGEKGPYCIACFEKEGKKILLPRAQSLHAHFGKYFCPVCKNHS
SIO_010081: CJU94_RS40585
subclass of: SO_0000673
so part of: CJU94_RS40585
location: complement(12840..13226)
location: region:12840-13226:-1
so has part: feature:12840-13226:-1:exon

WP_095424051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12840-13226:-1:exon

CJU94_RS40590
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40590
old locus tag: CJU94_40590
so part of: sequence
location: complement(13306..14196)
location: region:13306-14196:-1
so has part: feature:13306-14196:-1:exon
subclass of: SO_0000010

position:13306:-1
position: 13306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14196:-1
position: 14196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13306-14196:-1:exon

CJU94_RS40590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40590
old locus tag: CJU94_40590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTFMPTDCALAMGTLLHALPASQPDSTIAGMPASVFGNIVSGVVGSVITLGGVLLSNWHSRRLKRDELGHDTTQRDREREMALRREVFLPTVEAALAMQASIGTLVNLAVPAAVALDKFTAGNATFVKVAAIGTQETVTACQTLSSALGRGFWELSLRRGGLENFQNQLADLDRNTAIHEGLRDSWIKVQQEFVAKGEKDAEVWQAARAHFTHHMNEITKALTERSRIVSERQKAHGEMVRIMLKHVETIGPSFPPALFAMRREMQLPLDEAAFLERFNKLRDDQLAVVKATIDPA
SIO_010081: CJU94_RS40590
subclass of: SO_0000673
so part of: CJU94_RS40590
location: complement(13306..14196)
location: region:13306-14196:-1
so has part: feature:13306-14196:-1:exon

WP_157763937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13306-14196:-1:exon

CJU94_RS40595
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40595
old locus tag: CJU94_40595
so part of: sequence
location: complement(14275..14466)
location: region:14275-14466:-1
so has part: feature:14275-14466:-1:exon
subclass of: SO_0000010

position:14275:-1
position: 14275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14466:-1
position: 14466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14275-14466:-1:exon

CJU94_RS40595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40595
old locus tag: CJU94_40595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007586026.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDYRVSYEHSLASAPDDFIVQVPGQVISDVPASVPRALLPEFIADLIRQRSPKIGRIRNLRIL
SIO_010081: CJU94_RS40595
subclass of: SO_0000673
so part of: CJU94_RS40595
location: complement(14275..14466)
location: region:14275-14466:-1
so has part: feature:14275-14466:-1:exon

WP_095424053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14275-14466:-1:exon

CJU94_RS40600
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40600
old locus tag: CJU94_40600
so part of: sequence
location: complement(14664..16364)
location: region:14664-16364:-1
so has part: feature:14664-16364:-1:exon
subclass of: SO_0000010

position:14664:-1
position: 14664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16364:-1
position: 16364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14664-16364:-1:exon

CJU94_RS40600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40600
old locus tag: CJU94_40600
EC number: 3.1.21.-
inference: COORDINATES: protein motif:HMM:NF013579.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
translation: MKLAEGFQLLASAPNCVARLRELILSLAVQGKLVPQDVMDEPATSLLQKIRRERDRQISDGKIKREKALPEILEEEKPFELPKGWEWARLADLTAVLNGRAYAKHELLDAGVPVLRVGNLFTSKQWYYSDLELEVEKYCNPGDLLYAWSASFGPFIWAGPKVIYHYHIWKLDPHCDTCLNKNFLYTFLLEKTQEIKASGHGVAMIHMTKEKMEKIVVPVAPLAEQSRIVAKVDELMRLCDELESRGRLEAEQHARLTATLFEALAASESSHALAENWSRVAAHFDLLLDRPEAVDALEQTILQLAVCGLLVKQELSDEPASELLKRIQAEKDRLIADAGMRTTARLEVPEEEKYVGEVPGWQYCRLGNLARFIDYRGRTPQKVEAGVPLITAKNVRFGFISREPREYIAEKDYSAWMTRGFPRVGDLLFTTEAPLGNIALIDITERFALAQRVICFQLHDLSIGPYLRLAIMSAQVQERFSAAASGMTATGIKASRLKEIPVAIPPLAEQRRIVARVDELRRLCAALRARLTASQTCQAYFAEALVGQAALTGPVATHTADLAVAA
SIO_010081: CJU94_RS40600
subclass of: SO_0000673
so part of: CJU94_RS40600
location: complement(14664..16364)
location: region:14664-16364:-1
so has part: feature:14664-16364:-1:exon

WP_095424054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14664-16364:-1:exon

CJU94_RS40605
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40605
old locus tag: CJU94_40605
so part of: sequence
location: complement(16361..17830)
location: region:16361-17830:-1
so has part: feature:16361-17830:-1:exon
subclass of: SO_0000010

position:16361:-1
position: 16361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17830:-1
position: 17830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16361-17830:-1:exon

CJU94_RS40605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40605
old locus tag: CJU94_40605
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009962034.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent DNA methyltransferase
translation: MTISSTFIKSVQDIMRQDAGVDGDAQRISQLTWLLFLKIFDDQETELELMRDAYRSPLPERLRWRNWAADPEGITGDELLAFVNADLFPSLKALNADPQRNARGFVAREVFSDAYNYMKSGQLLRQVINRINEIDFNNRADRHLFNDLYERILKDLQSAGNAGEFYTPRAVTQFMVDQVNPRLGERILDPACGTGGFLACALEHLKTQRRSVEDDVVVQNAINGVEKKQLPHLLCVTNMMLHGIEVPSLIRHDNTLARPLADYGTRDMVDVILTNPPFGGTEEPGIEGNFPADVRTRETADLFLVLIIELLRHNGRAAVVLPDGTLFGEGVKTRIKEKLLTECNLHTIVRLPNGVFAPYTGIKTNLLFFTKGTPTREVWYYEHPYPTGYKSYSKTKPIRIEEFATEKAWWGSETDGFASRVENEFAWKVDIATLRTSGYNLDQKNPHKADEISHDPDELLAQYQRLTSEAQALRDQLKGILANALEGQA
SIO_010081: CJU94_RS40605
subclass of: SO_0000673
so part of: CJU94_RS40605
location: complement(16361..17830)
location: region:16361-17830:-1
so has part: feature:16361-17830:-1:exon

WP_095424055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16361-17830:-1:exon

CJU94_RS40610
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40610
old locus tag: CJU94_40610
so part of: sequence
location: complement(17849..20203)
location: region:17849-20203:-1
so has part: feature:17849-20203:-1:exon
subclass of: SO_0000010

position:17849:-1
position: 17849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20203:-1
position: 20203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17849-20203:-1:exon

CJU94_RS40610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40610
old locus tag: CJU94_40610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018443216.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MNKKSLSERDICSKFISPAITAAGWDLNTQLLEEVALTSGRVVVRGNRAKRDEKTIRRADYVLYFKPGIPLAIVEAKDNNHTVRDGIQQALAYADMLDVPFAFSSNGDGFIWHDRTLHDGVLEREIGMDQFPSPADLWQRYLTWKGIGPEAEPVYAQDYYPGKPARYYQLNAVNRAIEAVTKGQSRILLVMATGTGKTYTAFQIIWRLWKARAAKRILFLADRNILVDQTRTNDFKPFAGAMTKIENREVDKSYEIYLSLYQAVTGTEETQNIYRQFSRDFFDLVVIDECHRGSAAEDSAWREILDYFSSATHLGLTATPKETAEVSNITYFGEPVYTYSLRQGIEDGFLAPYKVIRVDLDKDLGWRPTSGMVDTLGQLVEDRIYNQSDMNRSLVLTRRDEAVAKRITEFLHATDRMAKTIVFCEDIDHAARMRQALINANPDLAGANPKYVMQITGDNLEGKLELDNFINPRKDYPVIATTSRLMTTGVDAKTCKLVVLDRTIRSMTEFKQIIGRGTRIDEEYGKLWFTILDFKKATELFADPAFDGDPVVVFEPGPDEPVVPPEEEGDPVGDPTGNLDGEAGDMPIIIGGPDLPGTGRTRYVIDEVPVYVVNERVQYLGPDGRLITESLRDFTRIQIGKRFVSLDAFLQAWNDADRKQAIVAELEEQGILFDELAKEAGKDLDPFDLVCHIAFGQKPLTRRERAENVRKRDYFGKYGHTARQVLQALLEKYADDGIENLERPEVLRLAPLDQLGSPVELVQAFGGRAQYQAAIRELERSLYQ
SIO_010081: CJU94_RS40610
subclass of: SO_0000673
so part of: CJU94_RS40610
location: complement(17849..20203)
location: region:17849-20203:-1
so has part: feature:17849-20203:-1:exon

WP_095424056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17849-20203:-1:exon

CJU94_RS40615
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40615
old locus tag: CJU94_40615
so part of: sequence
location: 20509..20584
location: region:20509-20584:1
so has part: feature:20509-20584:1:exon
subclass of: SO_0000663

position:20509:1
position: 20509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20584:1
position: 20584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20509-20584:1:exon

CJU94_RS40615
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2026199
locus tag: CJU94_RS40615
old locus tag: CJU94_40615
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:20542..20544,aa:Ala,seq:cgc)
SIO_010081: CJU94_RS40615
subclass of: SO_0000673
so part of: CJU94_RS40615
location: 20509..20584
location: region:20509-20584:1
so has part: feature:20509-20584:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20509-20584:1:exon

CJU94_RS40620
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40620
old locus tag: CJU94_40620
so part of: sequence
location: 20595..20966
location: region:20595-20966:1
so has part: feature:20595-20966:1:exon
subclass of: SO_0000010

position:20595:1
position: 20595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20966:1
position: 20966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20595-20966:1:exon

CJU94_RS40620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40620
old locus tag: CJU94_40620
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTISPELAEELRRMTLIKADQRRQKAIWQELRELRAKLRPIDRAWSDTRLALKQYEWDYTHVVPQLQEREAQLLDEIRPFLRQIDALEKEARRLDRKIRKAQQASEHTPAGPAGSSTRTPASP
SIO_010081: CJU94_RS40620
subclass of: SO_0000673
so part of: CJU94_RS40620
location: 20595..20966
location: region:20595-20966:1
so has part: feature:20595-20966:1:exon

WP_208645453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20595-20966:1:exon

CJU94_RS41290
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS41290
so part of: sequence
location: complement(21485..21703)
location: region:21485-21703:-1
so has part: feature:21485-21703:-1:exon
subclass of: SO_0000010

position:21485:-1
position: 21485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21703:-1
position: 21703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21485-21703:-1:exon

CJU94_RS41290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS41290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLLIVMATLKCVALGFPVFNVFHTFWEIALNNFITSDSASSAVKVVIEVAAEVGFATAAHLLAEGSPLHLQ
SIO_010081: CJU94_RS41290
subclass of: SO_0000673
so part of: CJU94_RS41290
location: complement(21485..21703)
location: region:21485-21703:-1
so has part: feature:21485-21703:-1:exon

WP_157763938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21485-21703:-1:exon

CJU94_RS40630
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40630
old locus tag: CJU94_40630
so part of: sequence
location: 23090..23548
location: region:23090-23548:1
so has part: feature:23090-23548:1:exon
subclass of: SO_0000010

position:23090:1
position: 23090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23548:1
position: 23548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23090-23548:1:exon

CJU94_RS40630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40630
old locus tag: CJU94_40630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010116282.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTLDLSQATAAAHVGGVLSAILKAEGGSFYVELETRTAGTAVLVTSNNRRPRAFRNPVKALEVIRELGLQTGRFSLEAWRPDETGFERPGRPDRAEAMKATHASAAAYDKWVRQQVQEAIDDPRPTIAHEDVMKKAEARIEAMRKGRRAKD
SIO_010081: CJU94_RS40630
subclass of: SO_0000673
so part of: CJU94_RS40630
location: 23090..23548
location: region:23090-23548:1
so has part: feature:23090-23548:1:exon

WP_095424058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23090-23548:1:exon

CJU94_RS40635
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40635
old locus tag: CJU94_40635
so part of: sequence
location: 23535..23810
location: region:23535-23810:1
so has part: feature:23535-23810:1:exon
subclass of: SO_0000010

position:23535:1
position: 23535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23810:1
position: 23810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23535-23810:1:exon

CJU94_RS40635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40635
old locus tag: CJU94_40635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004532132.1
GO function: GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MRRIEWKVQAESDLFDILDYIGHDNPDAAVELVQKIRAKVDGLRERPTLYRAGRIRGTREMIVHRNYIVFYRASDEIVTILRVKHARQQWP
SIO_010081: CJU94_RS40635
subclass of: SO_0000673
so part of: CJU94_RS40635
location: 23535..23810
location: region:23535-23810:1
so has part: feature:23535-23810:1:exon

WP_095424059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23535-23810:1:exon

CJU94_RS40640
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40640
old locus tag: CJU94_40640
so part of: sequence
location: complement(23977..24744)
location: region:23977-24744:-1
so has part: feature:23977-24744:-1:exon
subclass of: SO_0000010

position:23977:-1
position: 23977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24744:-1
position: 24744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23977-24744:-1:exon

CJU94_RS40640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40640
old locus tag: CJU94_40640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009242021.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MKTAAEKLEAQDGALSDRFVNMSNALTRAAQGLKLIEKRLISSAIAQSDSVELRKLAAALGPNQGWMVKLSAQDYADTFGVDQPTAYVQLREAAESIFNKYIRTVEQTRRGEKERKYRWVSGNTYHHGEGWVEINFAPEVAPFLLGLRKEFTTYKLKHTAALRSVYSWRLMEMFAQYRDTGLVRISFDDFCHAMEAPPSCLKDFGQLRRRVIDPAVAELTGKDGLLIEWKPTKNGGRKVTGLEFTFQPNPQLFLL
SIO_010081: CJU94_RS40640
subclass of: SO_0000673
so part of: CJU94_RS40640
location: complement(23977..24744)
location: region:23977-24744:-1
so has part: feature:23977-24744:-1:exon

WP_095424060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23977-24744:-1:exon

CJU94_RS40645
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40645
old locus tag: CJU94_40645
so part of: sequence
location: 25579..26262
location: region:25579-26262:1
so has part: feature:25579-26262:1:exon
subclass of: SO_0000010

position:25579:1
position: 25579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26262:1
position: 26262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25579-26262:1:exon

CJU94_RS40645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40645
old locus tag: CJU94_40645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017502313.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPTIVFVSPKGGAGKTTSALVLAEQIARSVPITVIDADPNHPIKTWADGPNTPANLTVVSNADEENVIDVIEEAASRTPFVLVDLEGTAAKIVLLAVSQADLVIVPTQGSQLDAAQASRALRVIKQQEKMSRRAVPYGVLITRTNPAIRTRTTSYLANAFREAGINLFETELHEREAFKALFAFNQPLSHLDPKDVSNVDKAVANAEAYATEVIELLRRASQPQEAA
SIO_010081: CJU94_RS40645
subclass of: SO_0000673
so part of: CJU94_RS40645
location: 25579..26262
location: region:25579-26262:1
so has part: feature:25579-26262:1:exon

WP_095424061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25579-26262:1:exon

CJU94_RS40650
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40650
old locus tag: CJU94_40650
so part of: sequence
location: 26259..26597
location: region:26259-26597:1
so has part: feature:26259-26597:1:exon
subclass of: SO_0000010

position:26259:1
position: 26259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26597:1
position: 26597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26259-26597:1:exon

CJU94_RS40650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40650
old locus tag: CJU94_40650
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: stability/partitioning determinant
translation: MSERANPLKGLNIADEFPVKAPHGRKPMLAPEAIEKLSQDNDFPSRQPAPTRSAEPARKQRRYTTGRNVQIPVKGTAETKALLEALADELQEPYGEVIARALAALRRELGGK
SIO_010081: CJU94_RS40650
subclass of: SO_0000673
so part of: CJU94_RS40650
location: 26259..26597
location: region:26259-26597:1
so has part: feature:26259-26597:1:exon

WP_095424062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26259-26597:1:exon