Paraburkholderia aromaticivorans strain BN5 plasmid pBN5, complete sequence.
type: Entry
definition: Paraburkholderia aromaticivorans strain BN5 plasmid pBN5, complete sequence.
sequence version: NZ_CP022995.1
sequence date: 2023-04-23
sequence: sequence
division: CON
label: NZ_CP022995.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN07510739
keyword: RefSeq
source: Paraburkholderia aromaticivorans
organism: Paraburkholderia aromaticivorans
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Paraburkholderia.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP022995.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 97.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/23/2023 04:56:50\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 8,144\nCDSs (total) :: 8,058\nGenes (coding) :: 7,860\nCDSs (with protein) :: 7,860\nGenes (RNA) :: 86\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 64\nncRNAs :: 4\nPseudo Genes (total) :: 198\nCDSs (without protein) :: 198\nPseudo Genes (ambiguous residues) :: 0 of 198\nPseudo Genes (frameshifted) :: 61 of 198\nPseudo Genes (incomplete) :: 157 of 198\nPseudo Genes (internal stop) :: 29 of 198\nPseudo Genes (multiple problems) :: 38 of 198\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 39532
topology: circular
so has quality: SO_0000988
location: 1..39532
location: region:1-39532:1
RO_0002162: 2026199

NZ_CP022995
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN07510739
type: BioSample
SIO_000068: biosample

1
title: Identification and genetic characteristics of simultaneous BTEX- and naphthalene-degrading Paraburkholderia sp. BN5 isolated from petroleum-contaminated soil
author: Lee, Y.
author: Jeon, C.O.
journal: Unpublished

2
title: Direct Submission
author: Lee, Y.
author: Jeon, C.O.
journal: Submitted (16-AUG-2017) Life Science, Chung-Ang University, 84 HeukSeok-Ro, Dongjak-Gu, Seoul 06974, Korea, Republic of

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39532:1
position: 39532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-39532:1:source
so part of: sequence
organism: Paraburkholderia aromaticivorans
mol type: genomic DNA
strain: BN5
isolation source: soil
type material: type strain of Paraburkholderia aromaticivorans
plasmid: pBN5
country: South Korea: Yangju, Gyeonggi-do
lat lon: 37.8407 N 127.0151 E
collection date: 2017-01-17

2026199
type: Taxonomy
SIO_000068: taxonomy

CJU94_RS40305
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40305
old locus tag: CJU94_40305
so part of: sequence
location: complement(join(39085..39532,1..704))
location: region:1-39532:-1
so has part: feature:1-704:-1:exon
so has part: feature:39085-39532:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39532:-1
position: 39532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-704:-1:exon

position:704:-1
position: 704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39085-39532:-1:exon

position:39085:-1
position: 39085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CJU94_RS40305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40305
old locus tag: CJU94_40305
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MAYDGVTQIFNYMDTVTTQVVAENMSRIIGWAAPIAALGLVIQLTIDGLATMLRPSGEPLSQLVEKFVKYFAIVAIAGAGGLYATTLANTAMHLPDEMASILLLHGSTGGSDSAVAGMIDAAIDHSLTVTRNLFKDAGVMTETGLVSLILGVVVIGSTMLICGISAISILLAKFLLAVTVCFGPIFILLLITPPLVSFFGNWLGSVFNYIVLIAMTAMSFGVFMRFYDLAISAAAKPNPDQAVLAPIITAGIITVMAVVLLKSLPDLAARWTGGVSTKLAQHLPQPRPGSSGGGGGKGSGGGSSGSGSGSGGGTGSGSGSAGGSSGSSSGGSGGYSYARGSQGSGSYGGGSSSSSGGSSPSSSGSGSASNASGRGSQSSQSNS
SIO_010081: CJU94_RS40305
subclass of: SO_0000673
so part of: CJU94_RS40305
location: complement(join(39085..39532,1..704))
location: region:1-39532:-1
so has part: feature:1-704:-1:exon
so has part: feature:39085-39532:-1:exon

WP_095424033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39085-39532:-1:exon

CJU94_RS40310
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40310
old locus tag: CJU94_40310
so part of: sequence
location: complement(742..981)
location: region:742-981:-1
so has part: feature:742-981:-1:exon
subclass of: SO_0000010

position:742:-1
position: 742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981:-1
position: 981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742-981:-1:exon

CJU94_RS40310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40310
old locus tag: CJU94_40310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011546597.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EexN family lipoprotein
translation: MNKYLCITAVFFLAACGKEYHEKDWYIQHDAEREARVHACDNDPAQYQRQGSDCLNAKDANGAVHLYGKDGALKRLTEK
SIO_010081: CJU94_RS40310
subclass of: SO_0000673
so part of: CJU94_RS40310
location: complement(742..981)
location: region:742-981:-1
so has part: feature:742-981:-1:exon

WP_095424001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:742-981:-1:exon

CJU94_RS40315
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40315
old locus tag: CJU94_40315
so part of: sequence
location: complement(992..1699)
location: region:992-1699:-1
so has part: feature:992-1699:-1:exon
subclass of: SO_0000010

position:992:-1
position: 992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1699:-1
position: 1699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992-1699:-1:exon

CJU94_RS40315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40315
old locus tag: CJU94_40315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007182935.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MKLWKQTAIAIVLAASCAGAHAQIVVTDPTSLAQRAANFLQQIAQMKAQLDQARQQYEAMSGTIGSYQNMLPTSISTLRNNLPQNWSQVYSDAMNSTSSVSGSASSILSQFDSQIRSMGRGDALTFIDQQLHAKGAYDRAMTEQAYDNQMRELNDMQSLTQQIGQATTQKQIEDLQARIQTAHGAINGEQTKLQLMAMGQQAQQQLLQQQKAVAQKRYLIGDDDEQNQAPNLSGN
SIO_010081: CJU94_RS40315
subclass of: SO_0000673
so part of: CJU94_RS40315
location: complement(992..1699)
location: region:992-1699:-1
so has part: feature:992-1699:-1:exon

WP_095424002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:992-1699:-1:exon

CJU94_RS40320
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40320
old locus tag: CJU94_40320
so part of: sequence
location: complement(1710..4376)
location: region:1710-4376:-1
so has part: feature:1710-4376:-1:exon
subclass of: SO_0000010

position:1710:-1
position: 1710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4376:-1
position: 4376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1710-4376:-1:exon

CJU94_RS40320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40320
old locus tag: CJU94_40320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007182936.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraB
translation: MAVAIRNISETKTFTKEPSFVKNIPYSQHLTETIISTIGGEYLIVFRVPGRTHQSAHDETLRSWVLDLNHVAKQIGNEHVKLWTHLHHHQIESYPAGNFKTRFARELDAKYRKSFEKTPLMTNDLYLTVVYNPVGDLTQKFLARFDRPSREQLDERQKQAIAALEDIATQLTGAMHSYGIEPLGLYYRDKNGNLIEEQDDTTDDADELDDDIEGDLLASLPAGDDGAAADPVPAAQRHVFSRALEWLGFLANGEWSPVPVCRGRIRDYLMTNRPVSSLFGDVIQIRTIDRNLFTAAVEIREYEEETEPGQLNLLMEAPFEFVLTQVFFCMSKAAGRIFLRNQQLSLIETGDPSHSQISQITDARDDLVSGRFVMGFHYATMHVIGDTAEQAQTLARQAKVMLNQCGVAAGAVGMASEAAYYSRLPGNTAFVPRPVPVNSWNFFCFSSFHNFLSGKATDNPWGRAIALFRAVSGTPAFFSFHSTPKKERSFGKRPPGVTGIFGRIGSGKTTLLDLLLTFATEISIDPRMAIYDRDRGMYPLVKALHGRYTVLKDGVPTGWQPLQLDPTRIYIAFVKRLLRVLAETTLNGEPLEQHEVDDLSAAIDAVMGPPIDDPEAHRGEQTLIPLADRSITAVVEHLPDPYRGPGARMTLAAMLRPWTRNGDYGWLFDNEADTLDFNTRDINAFDLTEFLVGKDEVAPVTRTPMLMYLNFRVRSTIDGKRRFIQVFDEFAQYLDDPIMVREIKRGIKNDRKKDCIYVFSTQEPNDAISSSIGKTVIQQMVTLLLLENRDADPEDYTGPAALKLAPAEYDAVKSIPEHSRQFLIKQSGQSGLAVMKLDGMDEELSILSGTPDNADRLEKLIRDLGTDDPNVWLPRYYAAVVGKKSSRY
SIO_010081: CJU94_RS40320
subclass of: SO_0000673
so part of: CJU94_RS40320
location: complement(1710..4376)
location: region:1710-4376:-1
so has part: feature:1710-4376:-1:exon

WP_095424003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1710-4376:-1:exon

CJU94_RS40325
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40325
old locus tag: CJU94_40325
so part of: sequence
location: complement(4378..4710)
location: region:4378-4710:-1
so has part: feature:4378-4710:-1:exon
subclass of: SO_0000010

position:4378:-1
position: 4378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4710:-1
position: 4710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4378-4710:-1:exon

CJU94_RS40325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40325
old locus tag: CJU94_40325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007182937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB3 family type IV secretion system protein
translation: MAKKFPLFKGATRVATWLLVPRNVFVLTFMFSASLFMVIHLWALLVFGVLWLIEWGITKHDDRMFRIIGLWLKTKVRNMYESAFTRLWGGSSYSPVDYSAPSINDIRGEV
SIO_010081: CJU94_RS40325
subclass of: SO_0000673
so part of: CJU94_RS40325
location: complement(4378..4710)
location: region:4378-4710:-1
so has part: feature:4378-4710:-1:exon

WP_095424004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4378-4710:-1:exon

CJU94_RS40330
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40330
old locus tag: CJU94_40330
so part of: sequence
location: complement(4710..4988)
location: region:4710-4988:-1
so has part: feature:4710-4988:-1:exon
subclass of: SO_0000010

position:4988:-1
position: 4988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4710-4988:-1:exon

CJU94_RS40330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40330
old locus tag: CJU94_40330
inference: COORDINATES: protein motif:HMM:NF016820.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MKKHIQAAQIVVGALALVAASQAFAVDTGASSLNSMHSWVMLWIPAACILGIVAIGAGIFFHLIKFHQVVNPVLGLIIIGSASAIVGFFGLV
SIO_010081: CJU94_RS40330
subclass of: SO_0000673
so part of: CJU94_RS40330
location: complement(4710..4988)
location: region:4710-4988:-1
so has part: feature:4710-4988:-1:exon

WP_095424005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4710-4988:-1:exon

CJU94_RS40335
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
gene: korA
locus tag: CJU94_RS40335
old locus tag: CJU94_40335
so part of: sequence
location: complement(4996..5301)
location: region:4996-5301:-1
so has part: feature:4996-5301:-1:exon
subclass of: SO_0000010

position:4996:-1
position: 4996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5301:-1
position: 5301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4996-5301:-1:exon

CJU94_RS40335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
gene: korA
locus tag: CJU94_RS40335
old locus tag: CJU94_40335
inference: COORDINATES: protein motif:HMM:NF041289.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KorA family transcriptional regulator
translation: MKKKVVYLAMLGQLESILREWRVVRVAIHRIEKREWIPFLDIENDAGQAYTCAFRVKKSLEPRTWSDLRALVDWLDTKVGVKECQLSFSDFEWESETLTLE
SIO_010081: CJU94_RS40335
subclass of: SO_0000673
so part of: CJU94_RS40335
location: complement(4996..5301)
location: region:4996-5301:-1
so has part: feature:4996-5301:-1:exon

WP_095424006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4996-5301:-1:exon

CJU94_RS40340
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40340
old locus tag: CJU94_40340
so part of: sequence
location: complement(5298..5957)
location: region:5298-5957:-1
so has part: feature:5298-5957:-1:exon
subclass of: SO_0000010

position:5298:-1
position: 5298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5957:-1
position: 5957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5298-5957:-1:exon

CJU94_RS40340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40340
old locus tag: CJU94_40340
inference: COORDINATES: protein motif:HMM:NF013618.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MHPLTVAYLVSAESHNNQFAINVNGGHSLDRQPTTEQEARNALAKLDARGWNYDVGYAQINSANFRSLGLTGTQLLDPCTNLRAGAQVLGDCYARAVQQVGEGQAALQRALSCYNTGNQQKGFANGYVKRVVAQVKLKIPALLDGPIDPNTSSSSSSNVSDPAGPAPAAAQLTQQQNPPASNQRTQLGEPGAANQIEAGAFAHPEIGAYIRRASTKGDQ
SIO_010081: CJU94_RS40340
subclass of: SO_0000673
so part of: CJU94_RS40340
location: complement(5298..5957)
location: region:5298-5957:-1
so has part: feature:5298-5957:-1:exon

WP_157763926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5298-5957:-1:exon

CJU94_RS42205
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS42205
old locus tag: CJU94_40345
so part of: sequence
location: 6130..6507
location: region:6130-6507:1
so has part: feature:6130-6507:1:exon
subclass of: SO_0000010

position:6130:1
position: 6130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6507:1
position: 6507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6130-6507:1:exon

CJU94_RS42205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS42205
old locus tag: CJU94_40345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019399556.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-NS histone family protein
translation: MSTTERNEGRRLINREDGVVIEFVPFPSQATPKGEARYRDPANPLNTWSGRGQRPSWLAAYVEQGRSIEEFAIPGAPPRVMTARYRDPADPGNTWTGYGRRPTWLLTYLEAGRKLEEFEVTNERS
SIO_010081: CJU94_RS42205
subclass of: SO_0000673
so part of: CJU94_RS42205
location: 6130..6507
location: region:6130-6507:1
so has part: feature:6130-6507:1:exon

WP_095424008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6130-6507:1:exon

CJU94_RS40350
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40350
old locus tag: CJU94_40350
so part of: sequence
location: 6511..6876
location: region:6511-6876:1
so has part: feature:6511-6876:1:exon
subclass of: SO_0000010

position:6511:1
position: 6511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6876:1
position: 6876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6511-6876:1:exon

CJU94_RS40350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40350
old locus tag: CJU94_40350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGQVIPIETAKHVRRVRRFAAVRERVAPVCAGAVRLIGRLLRDTAWFFIAGGLRFFGRYIRFALTCAVLVALVALGVECFHHWPHPRNAIIATLATIALLGLREALYRLERRAYDYHPLWR
SIO_010081: CJU94_RS40350
subclass of: SO_0000673
so part of: CJU94_RS40350
location: 6511..6876
location: region:6511-6876:1
so has part: feature:6511-6876:1:exon

WP_095424009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6511-6876:1:exon

CJU94_RS40355
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40355
old locus tag: CJU94_40355
so part of: sequence
location: 6882..7187
location: region:6882-7187:1
so has part: feature:6882-7187:1:exon
subclass of: SO_0000010

position:6882:1
position: 6882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7187:1
position: 7187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6882-7187:1:exon

CJU94_RS40355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40355
old locus tag: CJU94_40355
inference: COORDINATES: protein motif:HMM:NF019069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbM/KikA/MpfK family conjugal transfer protein
translation: MKKALSPLLALLLGLSVTAGASASSCGTVICMAGKVQGQSGGDDCNQAIKDFFSIKKYHHGHLDLGPTSDARRQFLDQCPDSQKQNSSSVDEIISRFGTME
SIO_010081: CJU94_RS40355
subclass of: SO_0000673
so part of: CJU94_RS40355
location: 6882..7187
location: region:6882-7187:1
so has part: feature:6882-7187:1:exon

WP_095424010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6882-7187:1:exon

CJU94_RS40360
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40360
old locus tag: CJU94_40360
so part of: sequence
location: complement(7359..7808)
location: region:7359-7808:-1
so has part: feature:7359-7808:-1:exon
subclass of: SO_0000010

position:7359:-1
position: 7359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7808:-1
position: 7808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7359-7808:-1:exon

CJU94_RS40360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40360
old locus tag: CJU94_40360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004636892.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTEISRTTAVLFPVDEEHARENGPLFTGSIKLDGESVPLSAFLKDAKESDKRYLDLSVGAKGQVHYSGRLFRNEEKKTAKSPDYSGYLVVLPLSPDVHDEYLQEEWDEAPRLNVYGRRVRNADNSVRIALDVVPQRSDVPVGDDEVAF
SIO_010081: CJU94_RS40360
subclass of: SO_0000673
so part of: CJU94_RS40360
location: complement(7359..7808)
location: region:7359-7808:-1
so has part: feature:7359-7808:-1:exon

WP_095424011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7359-7808:-1:exon

CJU94_RS40365
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40365
old locus tag: CJU94_40365
so part of: sequence
location: complement(7956..8384)
location: region:7956-8384:-1
so has part: feature:7956-8384:-1:exon
subclass of: SO_0000010

position:7956:-1
position: 7956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8384:-1
position: 8384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7956-8384:-1:exon

CJU94_RS40365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40365
old locus tag: CJU94_40365
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGNGWLIVDGGGNRPAFDQAMAEQAHLTILPFRASEEDLEAVARDMETMPDALALPSAWSTNKHAQDAARRLIDGLNKAFPGRVIDTPVWFVNSSAELLGASLESPSTAVRNAARHTFGILTAAFEAHAELAGEAQGATQAG
SIO_010081: CJU94_RS40365
subclass of: SO_0000673
so part of: CJU94_RS40365
location: complement(7956..8384)
location: region:7956-8384:-1
so has part: feature:7956-8384:-1:exon

WP_244221240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7956-8384:-1:exon

CJU94_RS42210
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS42210
so part of: sequence
location: complement(8366..8602)
location: region:8366-8602:-1
so has part: feature:8366-8602:-1:exon
subclass of: SO_0000010

position:8366:-1
position: 8366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8602:-1
position: 8602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8366-8602:-1:exon

CJU94_RS42210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS42210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNIVYVGGQKGGTTKTTTSHLMCLGAILRKQPAAYVLTDPHRRIKAERGGRMASWTAGTAPDWRRSLPRATTWGTAG
SIO_010081: CJU94_RS42210
subclass of: SO_0000673
so part of: CJU94_RS42210
location: complement(8366..8602)
location: region:8366-8602:-1
so has part: feature:8366-8602:-1:exon

WP_244221241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8366-8602:-1:exon

CJU94_RS40370
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40370
old locus tag: CJU94_40370
so part of: sequence
location: complement(8599..8925)
location: region:8599-8925:-1
so has part: feature:8599-8925:-1:exon
subclass of: SO_0000010

position:8599:-1
position: 8599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8925:-1
position: 8925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8599-8925:-1:exon

CJU94_RS40370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40370
old locus tag: CJU94_40370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010206255.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAAKGVDDLAARLTSAAATPLVAPVAAPAPAPAVTTPAETPAKRERKAVAKKDAAKKEATDTMQLTLRPTRALYGRYVAAAADRSRQEGRVVSVQEIMLEILEKGAV
SIO_010081: CJU94_RS40370
subclass of: SO_0000673
so part of: CJU94_RS40370
location: complement(8599..8925)
location: region:8599-8925:-1
so has part: feature:8599-8925:-1:exon

WP_095424012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8599-8925:-1:exon

CJU94_RS40375
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40375
old locus tag: CJU94_40375
pseudo: true
so part of: sequence
location: 9317..9974
location: region:9317-9974:1
so has part: feature:9317-9974:1:exon
subclass of: SO_0000010

position:9317:1
position: 9317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9974:1
position: 9974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9317-9974:1:exon

CJU94_RS40375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40375
old locus tag: CJU94_40375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007182946.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transcription elongation protein SprT
SIO_010081: CJU94_RS40375
subclass of: SO_0000673
so part of: CJU94_RS40375
location: 9317..9974
location: region:9317-9974:1
so has part: feature:9317-9974:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9317-9974:1:exon

CJU94_RS40380
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40380
old locus tag: CJU94_40380
so part of: sequence
location: 11148..11957
location: region:11148-11957:1
so has part: feature:11148-11957:1:exon
subclass of: SO_0000010

position:11148:1
position: 11148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11957:1
position: 11957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11148-11957:1:exon

CJU94_RS40380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40380
old locus tag: CJU94_40380
inference: COORDINATES: protein motif:HMM:NF013235.2
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MKDLVEQWREEQDAPASGTDPHVTIKNELVRRFQRMTLQQKRVLALAIAKCNPKLKILLHKATSPDPATGIAPGWPVRITAQEFLEAYPSIDAKHAYSDLKSAAESLYECSVEWTVIQTERGKKVPVRKVARWIYERADTSTSGWVELKFTPTIAPYLLGIERAYTTYKLKHAADLRSMYSWRLLEMMAQFRDTGLLVIGYDEFCEAMGAPASCIKDAGQLRRRVIDVAVKELQEKNGLKIEWEPTIPAGRKITGFKFTFQPDPQGRLF
SIO_010081: CJU94_RS40380
subclass of: SO_0000673
so part of: CJU94_RS40380
location: 11148..11957
location: region:11148-11957:1
so has part: feature:11148-11957:1:exon

WP_095424013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11148-11957:1:exon

CJU94_RS40390
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40390
old locus tag: CJU94_40390
so part of: sequence
location: complement(12526..12843)
location: region:12526-12843:-1
so has part: feature:12526-12843:-1:exon
subclass of: SO_0000010

position:12526:-1
position: 12526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12843:-1
position: 12843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12526-12843:-1:exon

CJU94_RS40390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40390
old locus tag: CJU94_40390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007182948.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTFTADEWRGDDASEAFGVRKVVPKKKEPTPGMKAVLVFDESFRSAKKQMKAYPAFRPTLDLPELISSMIDVCAADPALTERVIRNVVERRKAQLAAMEGVVSRP
SIO_010081: CJU94_RS40390
subclass of: SO_0000673
so part of: CJU94_RS40390
location: complement(12526..12843)
location: region:12526-12843:-1
so has part: feature:12526-12843:-1:exon

WP_244221242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12526-12843:-1:exon

CJU94_RS40395
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40395
old locus tag: CJU94_40395
so part of: sequence
location: complement(12885..13553)
location: region:12885-13553:-1
so has part: feature:12885-13553:-1:exon
subclass of: SO_0000010

position:12885:-1
position: 12885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13553:-1
position: 13553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12885-13553:-1:exon

CJU94_RS40395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40395
old locus tag: CJU94_40395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011546594.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQRLLDMVRHGYRHHASGVVSAERAQALCNKFQERYEVFLNMNQRAYRKGLGKANARLMLADLDRGDSLLWFLMVTDGEHAAHKLEKLKDALEQGERVHVTGYELLKLPHSKAAGGGVRLTWRMTTETERQWRFQIRSTVRSRRADDLVAGLVRSLYQTPGFHTTRYQVGKLVAFLSAEWERSGRKVETLPLPGALPYVRRMADENFTLDDWLAARATRYDN
SIO_010081: CJU94_RS40395
subclass of: SO_0000673
so part of: CJU94_RS40395
location: complement(12885..13553)
location: region:12885-13553:-1
so has part: feature:12885-13553:-1:exon

WP_244221243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12885-13553:-1:exon

CJU94_RS40400
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40400
old locus tag: CJU94_40400
so part of: sequence
location: 15338..17116
location: region:15338-17116:1
so has part: feature:15338-17116:1:exon
subclass of: SO_0000010

position:15338:1
position: 15338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17116:1
position: 17116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15338-17116:1:exon

CJU94_RS40400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40400
old locus tag: CJU94_40400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007182951.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system DNA-binding domain-containing protein
translation: MLIPNAVNMQSAQATVFAAVERALQWSSPWYWVVVAIPLFTVSVLHPVPWRLRTNDPTFLDLVTFLARRISVYALELLVVLVPLIGLFLFVISAGMSFGEAVSSYGAWLAGRLGQYWPIVAGAVVYGLALRFVWDRYISPRLSAFWRSVRVTQETDKLVDAREEVVTLKAKDFEPEKYFADGKIFYGLDEHDQPIYFDLKEFFTTHHAILGPTSYGKGIVLQGVFKQCIRFGFGVFYIDPKGDDYLPYLLQNEAQAAGRRFVYLDLNPGGKGVWHPFLGGDFRQRRTRIVRAFNLDSAGTDADVYKAKERALLDDALENTDGTIKSLLAYVKDHGNAGDRDLSTLRDSLREWSRVDTFAQPAKRKGHSIEACLLNNAVVYVRGDLADPVVKAATKAYIAELTAEIKRLLPQRPAHVTLGIDELKFLACAEINDALATIRQSRCNMLLAAQSIANLEAPDDKRLDGKALAREFEVNTPIKFVYRAADERTAEWAEKLSATQWLNVVQRETTKTNVHGGEQWEGNRMVGKLEQPIISQSTLLSLPARIAIAYMPGRNASKLYTCHAHIDRSVASWITQAPTTPAAAAESTESAE
SIO_010081: CJU94_RS40400
subclass of: SO_0000673
so part of: CJU94_RS40400
location: 15338..17116
location: region:15338-17116:1
so has part: feature:15338-17116:1:exon

WP_244221244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15338-17116:1:exon

CJU94_RS40405
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40405
old locus tag: CJU94_40405
so part of: sequence
location: 17335..17619
location: region:17335-17619:1
so has part: feature:17335-17619:1:exon
subclass of: SO_0000010

position:17335:1
position: 17335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17619:1
position: 17619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17335-17619:1:exon

CJU94_RS40405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40405
old locus tag: CJU94_40405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004527387.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNQVTGKITSIATIGEIFQKSPTINRLILKHVGQSAWEITKCDGERPNNLREVAERSAGKFAYERNIKRGFEALSGYDIDSDEQIKVVYRLPSD
SIO_010081: CJU94_RS40405
subclass of: SO_0000673
so part of: CJU94_RS40405
location: 17335..17619
location: region:17335-17619:1
so has part: feature:17335-17619:1:exon

WP_167397622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17335-17619:1:exon

CJU94_RS40410
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40410
old locus tag: CJU94_40410
so part of: sequence
location: complement(18035..18319)
location: region:18035-18319:-1
so has part: feature:18035-18319:-1:exon
subclass of: SO_0000010

position:18035:-1
position: 18035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18319:-1
position: 18319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18035-18319:-1:exon

CJU94_RS40410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40410
old locus tag: CJU94_40410
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKASEAVKQIQDAVLEVEKTGAKELLIANLNAYLANVSATALQQEQGEPSITEAQANHQLEVWKAELSRSSTMSVEMLKATVEAGQTALRSAIV
SIO_010081: CJU94_RS40410
subclass of: SO_0000673
so part of: CJU94_RS40410
location: complement(18035..18319)
location: region:18035-18319:-1
so has part: feature:18035-18319:-1:exon

WP_095424018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18035-18319:-1:exon

CJU94_RS40415
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40415
old locus tag: CJU94_40415
so part of: sequence
location: complement(18429..19232)
location: region:18429-19232:-1
so has part: feature:18429-19232:-1:exon
subclass of: SO_0000010

position:18429:-1
position: 18429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19232:-1
position: 19232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18429-19232:-1:exon

CJU94_RS40415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40415
old locus tag: CJU94_40415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007182957.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3560 domain-containing protein
translation: MNKYEAKQQARRDRLEARADRARSASNMTYTRAEVMASAIPSGQPILRGHHSERRDRNYRARIHNTFGKAFALQDQAKELERRAAAVGKGGISSDDPEAVDKLGVKLAELEQRHERMKRTNTLIRREDRAGLAALGYTADAIEKLFRPDYRGRAGFASYELTNSSANIRRIRDRIAALEKIAERCDREEQGRGYTYREDVEDNNRAAFVFDAKPDKPVRDLMKRNGFVYSPSRSPAGKSTYVRKLTPAAINTATWLRPQLDELLTGE
SIO_010081: CJU94_RS40415
subclass of: SO_0000673
so part of: CJU94_RS40415
location: complement(18429..19232)
location: region:18429-19232:-1
so has part: feature:18429-19232:-1:exon

WP_095424019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18429-19232:-1:exon

CJU94_RS41255
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS41255
so part of: sequence
location: complement(19286..19444)
location: region:19286-19444:-1
so has part: feature:19286-19444:-1:exon
subclass of: SO_0000010

position:19286:-1
position: 19286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19444:-1
position: 19444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19286-19444:-1:exon

CJU94_RS41255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS41255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTKLSTYHRTNHAASLALARRLRRDGSARAQMMEMAKASRHYFEQLRKIGE
SIO_010081: CJU94_RS41255
subclass of: SO_0000673
so part of: CJU94_RS41255
location: complement(19286..19444)
location: region:19286-19444:-1
so has part: feature:19286-19444:-1:exon

WP_157763927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19286-19444:-1:exon

CJU94_RS40420
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40420
old locus tag: CJU94_40420
so part of: sequence
location: complement(21777..22583)
location: region:21777-22583:-1
so has part: feature:21777-22583:-1:exon
subclass of: SO_0000010

position:21777:-1
position: 21777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22583:-1
position: 22583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21777-22583:-1:exon

CJU94_RS40420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40420
old locus tag: CJU94_40420
inference: COORDINATES: protein motif:HMM:NF025226.2
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MSNVLDHLKLLSRASRWILLSFILVAAGCAATPEARLYQLAKNNDLNGIDQAIAESGGRLTYGKALLLAAGLKSDAKTIRYLFTKVPINYQDPGTLETPLMRASSVPNNDIVINTILALGVSINVTDKRGWTALDFAHYAGLDHTARLLAGKGAIATVSAPDLRAYKAAEDAEIARQIEQDNQEIQQQVHPNIVPPPRALNPVPQNPTWQAGQNRSSGLTSPMSNGRCGPGRTEVTTCAKFCGQRGKRPVQPDGWICMPGNETPCDCY
SIO_010081: CJU94_RS40420
subclass of: SO_0000673
so part of: CJU94_RS40420
location: complement(21777..22583)
location: region:21777-22583:-1
so has part: feature:21777-22583:-1:exon

WP_095424020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21777-22583:-1:exon

CJU94_RS41260
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS41260
so part of: sequence
location: complement(22626..23567)
location: region:22626-23567:-1
so has part: feature:22626-23567:-1:exon
subclass of: SO_0000010

position:22626:-1
position: 22626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23567:-1
position: 23567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22626-23567:-1:exon

CJU94_RS41260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS41260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MREHQLSGIFVTLLITFSQQVEAIDWNLFPVVPTAPTAEDCRVLVLEHYENWIRPANERYSKCLEQKTMFGTATGGGRCKPSGITAWIQCVDLQEQSCLIHEKSSQEEDLCHQRATAVERAAAASKRDADRNQQRLADLIKKGKRIADLYSNSTNLITDPKAFLQKALVKSGQQALLRKMYPEAFGKNGPDREDLAQQAYESAWSLARNGSKNPVISEIQGTALDAIQREYDNVFRQLDSASVQLKNFTSEVASTRFSNPAPGLSPTPDPAVENRSGGGELTDCSILDNFAAASRLRDSDENKFLALTAKCTK
SIO_010081: CJU94_RS41260
subclass of: SO_0000673
so part of: CJU94_RS41260
location: complement(22626..23567)
location: region:22626-23567:-1
so has part: feature:22626-23567:-1:exon

WP_157763928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22626-23567:-1:exon

CJU94_RS41265
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS41265
so part of: sequence
location: complement(23599..23937)
location: region:23599-23937:-1
so has part: feature:23599-23937:-1:exon
subclass of: SO_0000010

position:23599:-1
position: 23599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23937:-1
position: 23937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23599-23937:-1:exon

CJU94_RS41265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS41265
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNKILQEDISLALERAHQQGYSTAQAAKAALDQAKEAQRVEAGAKQAALSSCPDYDTNPQPCEKSMADLLKGSSGQGPLPPAYGGYVVAHFATVANREIAAAFACLARQNR
SIO_010081: CJU94_RS41265
subclass of: SO_0000673
so part of: CJU94_RS41265
location: complement(23599..23937)
location: region:23599-23937:-1
so has part: feature:23599-23937:-1:exon

WP_157763929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23599-23937:-1:exon

CJU94_RS40425
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40425
old locus tag: CJU94_40425
so part of: sequence
location: complement(25042..25659)
location: region:25042-25659:-1
so has part: feature:25042-25659:-1:exon
subclass of: SO_0000010

position:25042:-1
position: 25042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25659:-1
position: 25659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25042-25659:-1:exon

CJU94_RS40425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40425
old locus tag: CJU94_40425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007182918.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MRDPADIATRDIETGAFLIGYARVSTRDQDLTNQEAQLRAAGCGRIFAEKITGTRRDRPQLDRLLDHLRAGDVVVVTRLDRLARSIRDLLDIVERIQTANAGLRSLAEPWADTTTPAGRMVLTVFAGIAEFERSLIVERTSTGRAAAKARGTKFGRKPTLTPAQLDHIYRLADEGNTSMQEIAALFGIHRSTLFRLLSQRAERAA
SIO_010081: CJU94_RS40425
subclass of: SO_0000673
so part of: CJU94_RS40425
location: complement(25042..25659)
location: region:25042-25659:-1
so has part: feature:25042-25659:-1:exon

WP_095424021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25042-25659:-1:exon

CJU94_RS42215
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS42215
so part of: sequence
location: complement(25656..25859)
location: region:25656-25859:-1
so has part: feature:25656-25859:-1:exon
subclass of: SO_0000010

position:25656:-1
position: 25656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25859:-1
position: 25859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25656-25859:-1:exon

CJU94_RS42215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS42215
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFPADADADPQAGIDWWNGITEAERAHWLAKASSARPRDAWGAHLQQSAHDDALNEAMSWLEARGNQ
SIO_010081: CJU94_RS42215
subclass of: SO_0000673
so part of: CJU94_RS42215
location: complement(25656..25859)
location: region:25656-25859:-1
so has part: feature:25656-25859:-1:exon

WP_244221238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25656-25859:-1:exon

CJU94_RS42380
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS42380
so part of: sequence
location: complement(26008..26130)
location: region:26008-26130:-1
so has part: feature:26008-26130:-1:exon
subclass of: SO_0000010

position:26008:-1
position: 26008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26130:-1
position: 26130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26008-26130:-1:exon

CJU94_RS42380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS42380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVIAAHYDEETDADCHVIGKFDNRLDVIHALWQHRREAAT
SIO_010081: CJU94_RS42380
subclass of: SO_0000673
so part of: CJU94_RS42380
location: complement(26008..26130)
location: region:26008-26130:-1
so has part: feature:26008-26130:-1:exon

WP_279636671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26008-26130:-1:exon

CJU94_RS40435
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40435
old locus tag: CJU94_40435
so part of: sequence
location: complement(26697..28895)
location: region:26697-28895:-1
so has part: feature:26697-28895:-1:exon
subclass of: SO_0000010

position:26697:-1
position: 26697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28895:-1
position: 28895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26697-28895:-1:exon

CJU94_RS40435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40435
old locus tag: CJU94_40435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012487177.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MKCPPVMTTEAERLKALSAYELGTEQPLPSLDPVVRIAARMFNMPVAAVNMIGSDQVFFAASVGLENGDVNMSRDASFCAHVITQGSVMVVPDATLDDRFHDNPLVTGQANVRFYAGVPLLSPDGHALGALCVIDNKPHHDFSSDDGERLGELAKMAADRLELRRVEMAMQQTAEPFRETDRNQSGALVQFDERHAVIAWDDAAAALYGYGPEEGFARSFDALVPERERDGVRDLVARAAAGLADDRLSMAANLHGLRKDGAEFELQLYLSRGRRNGSTIFNAFLTDQAALRREQDELHRLASTDSLTGLVNRTGFYRRVEQTLKNTSSLALLMIDLDAFKDINATLGHAIGDGILCEVARRLERITRQHDRVARIGGDEFTILLEDAGAAQANETASAVMSSISEPIIIAGQEMRVTACCGIAIAPLHALEAVQLIGNAGLALSRAKSLGRGKSVSFVSALRETAVANQLYSMELHRAVNDGEFVLFYQPQIRLADGTLAGAEALIRWLHPQHGLLSPAAFLPALESGPLAAAVGWWVLDEACAQAALWRRSGANDFRIGVNLFAAQIVTNGDLDSQVFSVLERHGLPPQALELEVTENIVLDRDDAVLDSLEKLRKRGVGIALDDFGTGYASPSVLKRCPVTRIKIDRSFVQGMLESERDASVVRATLHVARSFGMETIAEGVESEQQHEVLKSLGCEEGQGFLFGRPAPAPRFADAFGIELPTRHFAHS
SIO_010081: CJU94_RS40435
subclass of: SO_0000673
so part of: CJU94_RS40435
location: complement(26697..28895)
location: region:26697-28895:-1
so has part: feature:26697-28895:-1:exon

WP_095424023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26697-28895:-1:exon

CJU94_RS40440
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40440
old locus tag: CJU94_40440
so part of: sequence
location: complement(28942..30369)
location: region:28942-30369:-1
so has part: feature:28942-30369:-1:exon
subclass of: SO_0000010

position:28942:-1
position: 28942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30369:-1
position: 30369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28942-30369:-1:exon

CJU94_RS40440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40440
old locus tag: CJU94_40440
inference: COORDINATES: protein motif:HMM:NF012772.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MALLPALFPLPVQAVTPADLAVYNQPRHGVATRSVVGLTADQVAVDSWRFQVVCALPANSLAPAPLGGPLQSAVAPQMDCISPAIHTPSASAGQIAVSADAPQERRDDVSRPPPLPDTDVRAPTVAAPLARTLSLDTDGCGPAGFCDPIPARAVENAAPRVTPLREPDTPLVYSANARLRATLLSWFGLWLVLWLAFMGLLGLGAWAFYKRRLAPEARLIRAAEAGLRRGEFRLEYQPVMSLRKGGCVGVEAMIRWNNAEYGSRGPAYYMHILGKTRLSARLTRFVLSTAAQELAETTAGSSLFIGVDVSAAHVESKSFASDVSRSARSILSRLVLNMPQRGCAAPTADVLHTVATLRAKNVRFALANVDEVPSHRDRLEMFGFEQIKIDRHIMTFDEDERRERLSAVVGAVRPLGATVIAEGVESASHHAVVSQAGVDLAQGFFYGRTMTLSLLLTFLEAGGVSLRMRKKGRWK
SIO_010081: CJU94_RS40440
subclass of: SO_0000673
so part of: CJU94_RS40440
location: complement(28942..30369)
location: region:28942-30369:-1
so has part: feature:28942-30369:-1:exon

WP_157763930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28942-30369:-1:exon

CJU94_RS41270
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS41270
so part of: sequence
location: 30368..30514
location: region:30368-30514:1
so has part: feature:30368-30514:1:exon
subclass of: SO_0000010

position:30368:1
position: 30368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30514:1
position: 30514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30368-30514:1:exon

CJU94_RS41270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS41270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKARIKVGATQDPLINAFLLPRRITENFNPGQLYRFDGFKMLLNDEYQ
SIO_010081: CJU94_RS41270
subclass of: SO_0000673
so part of: CJU94_RS41270
location: 30368..30514
location: region:30368-30514:1
so has part: feature:30368-30514:1:exon

WP_157763931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30368-30514:1:exon

CJU94_RS40445
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40445
old locus tag: CJU94_40445
so part of: sequence
location: 30652..30852
location: region:30652-30852:1
so has part: feature:30652-30852:1:exon
subclass of: SO_0000010

position:30652:1
position: 30652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30852:1
position: 30852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30652-30852:1:exon

CJU94_RS40445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40445
old locus tag: CJU94_40445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007247377.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid-related protein
translation: MKDAGIRIRVEKDLREAFVAVCQEEDRRASDVLREFMQTYVQRHQIGQGDLFVGSAHRSPHKRKAT
SIO_010081: CJU94_RS40445
subclass of: SO_0000673
so part of: CJU94_RS40445
location: 30652..30852
location: region:30652-30852:1
so has part: feature:30652-30852:1:exon

WP_095424025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30652-30852:1:exon

CJU94_RS40450
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40450
old locus tag: CJU94_40450
so part of: sequence
location: 30966..32288
location: region:30966-32288:1
so has part: feature:30966-32288:1:exon
subclass of: SO_0000010

position:30966:1
position: 30966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32288:1
position: 32288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30966-32288:1:exon

CJU94_RS40450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40450
old locus tag: CJU94_40450
EC number: 2.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006493490.1
GO function: GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA cytosine methyltransferase
translation: MTLKARSGSVEHVDLAEPRARRKKPSAAKRTGGKGKGLPPLRTIDLFCGAGGITEGFRQAGYVSLYGNDVMPEAIETFKLNHPEAIADCRPIESVEPSEIRKRLGLQPGELDVLVGGPPCQGFSINAPERFLKDPRNKLFEHYERFLEEFQPKAFVFENVPGLLSLGDGKVFRQIVKIFTGLGYAVTAKILFAGHYGVPQERWRLILLGSKSGEVAHPEPTHYAVGRANFRGGNTMTFQLDDSDRERLLPAVTVGAAIADLPRLAMGEGSEVIGYTNDSHSFYAEQMRNPADVTFNHFAAKLSKQNAERMKHVRPGGSWRDIPHDLLPKGMQRARRSDHTKRYGRLHPDGLSGTVLTKCDPHWGTVFLPDQDRTLTVREAARFQSFPDSYRFLGSRVSQYEQVGNAVPVLMAKAIATQLREHLTQEVTDSKIAESAVETA
SIO_010081: CJU94_RS40450
subclass of: SO_0000673
so part of: CJU94_RS40450
location: 30966..32288
location: region:30966-32288:1
so has part: feature:30966-32288:1:exon

WP_095424035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30966-32288:1:exon

CJU94_RS40455
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40455
old locus tag: CJU94_40455
so part of: sequence
location: complement(32290..33324)
location: region:32290-33324:-1
so has part: feature:32290-33324:-1:exon
subclass of: SO_0000010

position:32290:-1
position: 32290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33324:-1
position: 33324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32290-33324:-1:exon

CJU94_RS40455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40455
old locus tag: CJU94_40455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011046795.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NotI family restriction endonuclease
translation: MAKTPRKPKDQSPRFGIGEWYGFNFTQLTPEERQQFATECLKPKRQRAPQPCPFQARKVGAICSKDGGVCSLRQYSYAAHPDTGRAVGVPVTGRQGDVRATCPYRFHEALDVFKWVGETILGDPEPILVSEVGFLEAGATTDNAGGDDVGRIDMVLVSHKTAKGAPMKWAALEIQAVYFSGDAMRGEFEAFSDTSVDWMIFPAGRRRPDYRSSGPKRLMPQLQIKVPTLRRWGKKMAVVVDRAFFDSIGEMDNVADISNADIAWFVVRFEEVEGGKRTRIVRDEVRYTTLERSVEGLTGGKPVPLPTFETRITEKIVHPSLNQDDPYADQLKLIEPGDASAAGE
SIO_010081: CJU94_RS40455
subclass of: SO_0000673
so part of: CJU94_RS40455
location: complement(32290..33324)
location: region:32290-33324:-1
so has part: feature:32290-33324:-1:exon

WP_095424026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32290-33324:-1:exon

CJU94_RS40460
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40460
old locus tag: CJU94_40460
so part of: sequence
location: 33373..33777
location: region:33373-33777:1
so has part: feature:33373-33777:1:exon
subclass of: SO_0000010

position:33373:1
position: 33373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33777:1
position: 33777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33373-33777:1:exon

CJU94_RS40460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40460
old locus tag: CJU94_40460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018390856.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: very short patch repair endonuclease
translation: MGMSRSENMRRIRGKNTRPELVIRKLLRELGFPGYRLHRKDLPGKPDVAYIGRRKAVVIHGCFWHGHACKIGLRKPLTNRDYWLPKIERNRARDAQHLVDMAGLGWSVLTVWECELRDVVALSAKLAGFMEDMA
SIO_010081: CJU94_RS40460
subclass of: SO_0000673
so part of: CJU94_RS40460
location: 33373..33777
location: region:33373-33777:1
so has part: feature:33373-33777:1:exon

WP_095424027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33373-33777:1:exon

CJU94_RS42385
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS42385
old locus tag: CJU94_40465
so part of: sequence
location: complement(33946..34251)
location: region:33946-34251:-1
so has part: feature:33946-34251:-1:exon
subclass of: SO_0000010

position:33946:-1
position: 33946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34251:-1
position: 34251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33946-34251:-1:exon

CJU94_RS42385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS42385
old locus tag: CJU94_40465
inference: COORDINATES: protein motif:HMM:NF013014.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-NS histone family protein
translation: MPTQTYEELIAERDAIQRKVDEAFAHERELAFAKIRELMQQYSIRVVDLTRRTRFKLSKPKIKYRDPTTGNTWTGRGRPPGWMQGRDPAEFLIDRPDDQNK
SIO_010081: CJU94_RS42385
subclass of: SO_0000673
so part of: CJU94_RS42385
location: complement(33946..34251)
location: region:33946-34251:-1
so has part: feature:33946-34251:-1:exon

WP_095424028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33946-34251:-1:exon

CJU94_RS40470
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40470
old locus tag: CJU94_40470
so part of: sequence
location: complement(34326..34586)
location: region:34326-34586:-1
so has part: feature:34326-34586:-1:exon
subclass of: SO_0000010

position:34326:-1
position: 34326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34586:-1
position: 34586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34326-34586:-1:exon

CJU94_RS40470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40470
old locus tag: CJU94_40470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007182926.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2274 domain-containing protein
translation: MTQKPARKSSARLLLPIVKREPEKTKLPVNLAQDVHADLLAYQRAYQDMNGAEVSLDFIIEHVLVQHLKRDKAFQTWKTTQPKNAG
SIO_010081: CJU94_RS40470
subclass of: SO_0000673
so part of: CJU94_RS40470
location: complement(34326..34586)
location: region:34326-34586:-1
so has part: feature:34326-34586:-1:exon

WP_095424029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34326-34586:-1:exon

CJU94_RS40475
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40475
old locus tag: CJU94_40475
so part of: sequence
location: complement(34601..35074)
location: region:34601-35074:-1
so has part: feature:34601-35074:-1:exon
subclass of: SO_0000010

position:34601:-1
position: 34601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35074:-1
position: 35074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34601-35074:-1:exon

CJU94_RS40475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40475
old locus tag: CJU94_40475
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHLNHTNIFWIVAAAIVAMIAYRKLAPYLRGRMKGEPVLDHVQRVAHEQEQYRLRQRDLNMTRQKAVRVRAINAGVLIGFMCLASYLMRQAGFQVTNNTILSFGVYVVIGLLACSLAKAVPAELFAGLNWHSRIDVRLYYVWLWPLNVIKAIRRKH
SIO_010081: CJU94_RS40475
subclass of: SO_0000673
so part of: CJU94_RS40475
location: complement(34601..35074)
location: region:34601-35074:-1
so has part: feature:34601-35074:-1:exon

WP_095424030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34601-35074:-1:exon

CJU94_RS40480
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40480
old locus tag: CJU94_40480
so part of: sequence
location: complement(35086..36102)
location: region:35086-36102:-1
so has part: feature:35086-36102:-1:exon
subclass of: SO_0000010

position:35086:-1
position: 35086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36102:-1
position: 36102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35086-36102:-1:exon

CJU94_RS40480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40480
old locus tag: CJU94_40480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007182928.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase, T2SS/T4P/T4SS family
translation: MNAPANLKYFDNRSLLSTLGPLNEYLNDPNVYELRVNRFGQLVCATTKGRILHDAPFLTKSYLEKLTNTLLSANGLPRQPVNDVLLPDGSRGVICWPPAVLEGTVLIAIRKHLAVDKTLEELDAEGRFKKLQIRTFADSLKLTPFEEEMIALRDKADITGFLKAAITGKLNVAVAGATGSGKSTFTRTLLKYVPRRERVLILEDTHEVGSDDHDEIGYLVYGEQEGRLSARECLKTTMRLSPDRIFLTELRDDAAWDYIKSANTGHPGGIFSTHSNSAAETPSRIADLVKSSEVGRMLDYDMILRTIHATLDLIIYMKDWDVVELLYDPLFKKQNAAR
SIO_010081: CJU94_RS40480
subclass of: SO_0000673
so part of: CJU94_RS40480
location: complement(35086..36102)
location: region:35086-36102:-1
so has part: feature:35086-36102:-1:exon

WP_095424031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35086-36102:-1:exon

CJU94_RS40485
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
gene: virB10
locus tag: CJU94_RS40485
old locus tag: CJU94_40485
so part of: sequence
location: complement(36099..37250)
location: region:36099-37250:-1
so has part: feature:36099-37250:-1:exon
subclass of: SO_0000010

position:36099:-1
position: 36099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37250:-1
position: 37250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36099-37250:-1:exon

CJU94_RS40485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
gene: virB10
locus tag: CJU94_RS40485
old locus tag: CJU94_40485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007737252.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB10
translation: MTDRIDTPESVPDGRQPFVAGPRRSVPGLAAFLLLMVLLALALIGFLAWHALHPKAPDADQAGSKRDQTFAGALPVRHFTETPASAVPTSSPEPASAPATSTNSAAQGQQQASPEELANMRRLGRSQGGSGNAQGAGAQADAGAPPPASPGGSPVQRVSQSSDTLDRATTAARPQAVKATMLAHPSLTVPSGVMIPCGTKTELDTTQPGMVSCQVSSDVYSADGKVKLVDKGAHVDGEISSGIKMGQNRVFVLWTRVRNPDNTLVNIDSPGTNSLGSSGIPGQVDTHFWTRFGGAMFISVFSDVGQALVQLAANRGNSSGGNTNISLDNTSNTGNQLAAEALRATIDIPPTLYDQQGDRVMIYVRRDLDFSDVYTLSMDEPQQ
SIO_010081: CJU94_RS40485
subclass of: SO_0000673
so part of: CJU94_RS40485
location: complement(36099..37250)
location: region:36099-37250:-1
so has part: feature:36099-37250:-1:exon

WP_095424032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36099-37250:-1:exon

CJU94_RS40490
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40490
old locus tag: CJU94_40490
so part of: sequence
location: complement(37247..38140)
location: region:37247-38140:-1
so has part: feature:37247-38140:-1:exon
subclass of: SO_0000010

position:37247:-1
position: 37247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38140:-1
position: 38140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37247-38140:-1:exon

CJU94_RS40490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40490
old locus tag: CJU94_40490
inference: COORDINATES: protein motif:HMM:NF015487.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbG/VirB9 family P-type conjugative transfer protein
translation: MRLAMIPLLAALAFTGVQHAWAIGPKKDSPYDRRIKSVTYNPIDTVEVNCVIGLALTITVAPGERYVTHAFGDQAAWALSQNGNHIFVQPTQANSDTNLVLVTDRHVYHLLLHFIGSKKADDGSAGNTADSFIKTPWAMRSATIALNYNYPDDDRRVALAKTNAQRVKDALATASDQGLVNMSYDRSYDPAMNDIAPVNAWDNYRFTSFKFLPNAELPTITYISASGKETVPNVHIEGPNHNIIVAELVAKEWRIRSGNKVIGVRNQNFNPALGANPSGTVSPYVRRALKQDNGDNQ
SIO_010081: CJU94_RS40490
subclass of: SO_0000673
so part of: CJU94_RS40490
location: complement(37247..38140)
location: region:37247-38140:-1
so has part: feature:37247-38140:-1:exon

WP_208645452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37247-38140:-1:exon

CJU94_RS40495
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS40495
old locus tag: CJU94_40495
so part of: sequence
location: complement(38143..38874)
location: region:38143-38874:-1
so has part: feature:38143-38874:-1:exon
subclass of: SO_0000010

position:38143:-1
position: 38143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38874:-1
position: 38874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38143-38874:-1:exon

CJU94_RS40495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS40495
old locus tag: CJU94_40495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019692593.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MMNLALGKLGKSGATPITASDIEKYKEERQGLEVDLLDEVLTSRKRAWQVSASAIGFGFLSLALAGFVIWRYSQPIPEHMLVMDPKTGAVQQVSLMPGETTSYGEVVDSYWIAQFVIHHEGYEFYSAQADYDFISLTATGEVADKYQKLWNGAEAPDKKLGDTEMNRVNVSSVILDREHGIATVRYTTTKKYRARPSDEPTKYWIATVAYKYTTKPMTAKQRFINPFGLQVLAFRPNAEATEN
SIO_010081: CJU94_RS40495
subclass of: SO_0000673
so part of: CJU94_RS40495
location: complement(38143..38874)
location: region:38143-38874:-1
so has part: feature:38143-38874:-1:exon

WP_244221239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38143-38874:-1:exon

CJU94_RS41275
type: Gene
subclass of: SO_0000704
RO_0002162: 2026199
locus tag: CJU94_RS41275
so part of: sequence
location: complement(38871..39062)
location: region:38871-39062:-1
so has part: feature:38871-39062:-1:exon
subclass of: SO_0000010

position:38871:-1
position: 38871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39062:-1
position: 39062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38871-39062:-1:exon

CJU94_RS41275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2026199
locus tag: CJU94_RS41275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIRHIAIGLLAVTSLAGCAHVTPPPEPDMAKLVPVNKTIPEELQGRVAPQSLTSKNAGGTAQ
SIO_010081: CJU94_RS41275
subclass of: SO_0000673
so part of: CJU94_RS41275
location: complement(38871..39062)
location: region:38871-39062:-1
so has part: feature:38871-39062:-1:exon

WP_157763932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38871-39062:-1:exon