Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence.
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Paraburkholderia.
Identification and genetic characteristics of simultaneous BTEX- and naphthalene-degrading Paraburkholderia sp. BN5 isolated from petroleum-contaminated soil
Submitted (16-AUG-2017) Life Science, Chung-Ang University, 84 HeukSeok-Ro, Dongjak-Gu, Seoul 06974, Korea, Republic of
REFSEQ INFORMATION: The reference sequence is identical to\nCP022991.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 97.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/23/2023 04:56:50\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 8,144\nCDSs (total) :: 8,058\nGenes (coding) :: 7,860\nCDSs (with protein) :: 7,860\nGenes (RNA) :: 86\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 64\nncRNAs :: 4\nPseudo Genes (total) :: 198\nCDSs (without protein) :: 198\nPseudo Genes (ambiguous residues) :: 0 of 198\nPseudo Genes (frameshifted) :: 61 of 198\nPseudo Genes (incomplete) :: 157 of 198\nPseudo Genes (internal stop) :: 29 of 198\nPseudo Genes (multiple problems) :: 38 of 198\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Paraburkholderia aromaticivorans
COORDINATES: similar to AA sequence:RefSeq:WP_011801729.1
GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
GO:0016163 - nitrogenase activity [Evidence IEA]
GO:0009399 - nitrogen fixation [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
nitrogenase molybdenum-iron protein alpha chain
COORDINATES: similar to AA sequence:RefSeq:WP_011491824.1
GO:0016611 - iron-iron nitrogenase complex [Evidence IEA]; GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]; GO:0016613 - vanadium-iron nitrogenase complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011491825.1
COORDINATES: similar to AA sequence:RefSeq:WP_020202093.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491827.1
GO:0005515 - protein binding [Evidence IEA]
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011491828.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491829.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177236.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880138.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011491832.1
COORDINATES: similar to AA sequence:RefSeq:WP_018423187.1
GO:0008483 - transaminase activity [Evidence IEA]
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011491834.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177241.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491835.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011491836.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491837.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177245.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177246.1
4Fe4S-binding leucine-rich repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_011491840.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491841.1
iron-sulfur cluster assembly accessory protein
COORDINATES: similar to AA sequence:RefSeq:WP_011800976.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491842.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
nitrogenase cofactor biosynthesis protein NifB
COORDINATES: similar to AA sequence:RefSeq:WP_007177251.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0009399 - nitrogen fixation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
nif-specific transcriptional activator NifA
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_007177252.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0044571 - [2Fe-2S] cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019916659.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007177254.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
iron-sulfur cluster insertion protein ErpA
COORDINATES: similar to AA sequence:RefSeq:WP_017478657.1
GO:0005506 - iron ion binding [Evidence IEA]
iron-sulfur cluster assembly protein IscA
COORDINATES: similar to AA sequence:RefSeq:WP_007177256.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007177257.1
COORDINATES: similar to AA sequence:RefSeq:WP_018423206.1
GO:0004410 - homocitrate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011491851.1
nitrogenase stabilizing/protective protein NifW
COORDINATES: similar to AA sequence:RefSeq:WP_007177260.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007177261.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011880113.1
COORDINATES: similar to AA sequence:RefSeq:WP_018423212.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880111.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007177265.1
COORDINATES: similar to AA sequence:RefSeq:WP_011518634.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007740894.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015737.2
COORDINATES: similar to AA sequence:RefSeq:WP_013343036.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
autotransporter strand-loop-strand O-heptosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011351613.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018420589.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013952654.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
isocitrate/isopropylmalate family dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_006048683.1
COORDINATES: similar to AA sequence:RefSeq:WP_007178406.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011492885.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493367.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492887.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492888.1
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011492889.1
COORDINATES: similar to AA sequence:RefSeq:WP_007178412.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011492891.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493364.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004554989.1
COORDINATES: similar to AA sequence:RefSeq:WP_007735013.1
COORDINATES: similar to AA sequence:RefSeq:WP_004528370.1
COORDINATES: similar to AA sequence:RefSeq:WP_007735010.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493359.1
GO:1990204 - oxidoreductase complex [Evidence IEA]
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
NADH-quinone oxidoreductase subunit B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007735006.1
COORDINATES: similar to AA sequence:RefSeq:WP_012433063.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007735002.1
COORDINATES: similar to AA sequence:RefSeq:WP_010109399.1
COORDINATES: similar to AA sequence:RefSeq:WP_004201004.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF025051.2
COORDINATES: similar to AA sequence:RefSeq:WP_004557763.1
COORDINATES: similar to AA sequence:RefSeq:WP_009981770.1
COORDINATES: similar to AA sequence:RefSeq:WP_011301277.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011942005.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0015662 - P-type ion transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018419928.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018421915.1
COORDINATES: similar to AA sequence:RefSeq:WP_086558222.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013342205.1
COORDINATES: similar to AA sequence:RefSeq:WP_013342206.1
COORDINATES: similar to AA sequence:RefSeq:WP_012492354.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015961495.1
COORDINATES: similar to AA sequence:RefSeq:WP_012434623.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015446 - ATPase-coupled arsenite transmembrane transporter activity [Evidence IEA]
GO:0071722 - detoxification of arsenic-containing substance [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012434622.1
arsenite efflux transporter metallochaperone ArsD
COORDINATES: similar to AA sequence:RefSeq:WP_020066797.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007582593.1
COORDINATES: similar to AA sequence:RefSeq:WP_007582591.1
COORDINATES: similar to AA sequence:RefSeq:WP_007582589.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011204864.1
COORDINATES: similar to AA sequence:RefSeq:WP_007582585.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008920893.1
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_012433092.1
COORDINATES: similar to AA sequence:RefSeq:WP_011490225.1
COORDINATES: protein motif:HMM:NF020432.2
COORDINATES: similar to AA sequence:RefSeq:WP_017774473.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007739554.1
COORDINATES: similar to AA sequence:RefSeq:WP_006480359.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009770075.1
COORDINATES: similar to AA sequence:RefSeq:WP_012493599.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008353952.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014251827.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020067629.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020067628.1
COORDINATES: similar to AA sequence:RefSeq:WP_020067627.1
COORDINATES: similar to AA sequence:RefSeq:WP_020067626.1
GO:0015293 - symporter activity [Evidence IEA]
cation:dicarboxylase symporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_018424857.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093760.1
COORDINATES: similar to AA sequence:RefSeq:WP_011488609.1
COORDINATES: similar to AA sequence:RefSeq:WP_011490765.1
COORDINATES: similar to AA sequence:RefSeq:WP_007738499.1
COORDINATES: similar to AA sequence:RefSeq:WP_018419032.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_005669393.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_006759512.1
COORDINATES: similar to AA sequence:RefSeq:WP_015878085.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253157.1
COORDINATES: similar to AA sequence:RefSeq:WP_018417942.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094067.1
COORDINATES: similar to AA sequence:RefSeq:WP_006751529.1
pyrogallol hydroxytransferase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012433177.1
COORDINATES: similar to AA sequence:RefSeq:WP_012433178.1
COORDINATES: similar to AA sequence:RefSeq:WP_017234384.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013590306.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006046925.1
COORDINATES: similar to AA sequence:RefSeq:WP_012433182.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014191366.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020066161.1
COORDINATES: similar to AA sequence:RefSeq:WP_020066162.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0106141 - flavin prenyltransferase activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012433186.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013338219.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406709.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017233443.1
COORDINATES: protein motif:HMM:NF022795.2
COORDINATES: protein motif:HMM:NF012257.2
GO:0030551 - cyclic nucleotide binding [Evidence IEA]
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011494458.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428165.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012433136.1
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF025045.2
COORDINATES: similar to AA sequence:RefSeq:WP_007732316.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011659989.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
CDF family Co(II)/Ni(II) efflux transporter DmeF
COORDINATES: similar to AA sequence:RefSeq:WP_009941095.1
metal/formaldehyde-sensitive transcriptional repressor
COORDINATES: similar to AA sequence:RefSeq:WP_007742963.1
COORDINATES: similar to AA sequence:RefSeq:WP_013590974.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050327.1
COORDINATES: similar to AA sequence:RefSeq:WP_020067630.1
COORDINATES: similar to AA sequence:RefSeq:WP_008970407.1
COORDINATES: protein motif:HMM:NF024488.2
COORDINATES: similar to AA sequence:RefSeq:WP_007580820.1
COORDINATES: similar to AA sequence:RefSeq:WP_016355071.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007790799.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012641662.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250588.1
COORDINATES: similar to AA sequence:RefSeq:WP_008921942.1
COORDINATES: similar to AA sequence:RefSeq:WP_017774833.1
COORDINATES: similar to AA sequence:RefSeq:WP_018903208.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018420534.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587220.1
COORDINATES: similar to AA sequence:RefSeq:WP_015013153.1
COORDINATES: similar to AA sequence:RefSeq:WP_008918906.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492950.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001554376.1
COORDINATES: similar to AA sequence:RefSeq:WP_007577957.1
COORDINATES: similar to AA sequence:RefSeq:WP_020157370.1
YbhB/YbcL family Raf kinase inhibitor-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_012591559.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024092.2
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017940084.1
COORDINATES: similar to AA sequence:RefSeq:WP_008067408.1
COORDINATES: similar to AA sequence:RefSeq:WP_007732362.1
COORDINATES: similar to AA sequence:RefSeq:WP_007732364.1
COORDINATES: similar to AA sequence:RefSeq:WP_013343219.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017775750.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013689103.1
COORDINATES: similar to AA sequence:RefSeq:WP_018440021.1
COORDINATES: similar to AA sequence:RefSeq:WP_011548938.1
COORDINATES: similar to AA sequence:RefSeq:WP_018440023.1
COORDINATES: similar to AA sequence:RefSeq:WP_010107602.1
COORDINATES: similar to AA sequence:RefSeq:WP_010107603.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012433388.1
COORDINATES: similar to AA sequence:RefSeq:WP_014972454.1
ESPR-type extended signal peptide-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012433390.1
COORDINATES: similar to AA sequence:RefSeq:WP_012433391.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012433392.1
COORDINATES: similar to AA sequence:RefSeq:WP_010099320.1
COORDINATES: similar to AA sequence:RefSeq:WP_008922969.1
COORDINATES: similar to AA sequence:RefSeq:WP_012431896.1
COORDINATES: similar to AA sequence:RefSeq:WP_007747257.1
COORDINATES: similar to AA sequence:RefSeq:WP_012431894.1
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011549774.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549776.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011481654.1
GO:0006865 - amino acid transport [Evidence IEA]
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012336745.1
COORDINATES: similar to AA sequence:RefSeq:WP_006029628.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012336746.1
COORDINATES: similar to AA sequence:RefSeq:WP_020610568.1
COORDINATES: similar to AA sequence:RefSeq:WP_007284522.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549783.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012336750.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013591869.1
COORDINATES: similar to AA sequence:RefSeq:WP_004396238.1
COORDINATES: similar to AA sequence:RefSeq:WP_007178116.1
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020067693.1
COORDINATES: similar to AA sequence:RefSeq:WP_007584471.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006050998.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012404396.1
amino acid ABC transporter permease/ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006051000.1
COORDINATES: similar to AA sequence:RefSeq:WP_012226865.1
COORDINATES: similar to AA sequence:RefSeq:WP_014972666.1
COORDINATES: similar to AA sequence:RefSeq:WP_018438425.1
COORDINATES: similar to AA sequence:RefSeq:WP_020290800.1
COORDINATES: similar to AA sequence:RefSeq:WP_013092875.1
COORDINATES: similar to AA sequence:RefSeq:WP_008326821.1
COORDINATES: similar to AA sequence:RefSeq:WP_007178146.1
SET domain-containing protein-lysine N-methyltransferase
COORDINATES: protein motif:HMM:NF025878.2
COORDINATES: protein motif:HMM:NF024242.2
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006050309.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177841.1
COORDINATES: similar to AA sequence:RefSeq:WP_007250071.1
COORDINATES: similar to AA sequence:RefSeq:WP_013698035.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020070974.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341466.1
COORDINATES: similar to AA sequence:RefSeq:WP_014973142.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094561.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_020070979.1
COORDINATES: similar to AA sequence:RefSeq:WP_007732732.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_006404108.1
COORDINATES: similar to AA sequence:RefSeq:WP_013696539.1
COORDINATES: similar to AA sequence:RefSeq:WP_012401755.1
COORDINATES: similar to AA sequence:RefSeq:WP_020068796.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405604.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012405605.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405606.1
COORDINATES: similar to AA sequence:RefSeq:WP_020716254.1
COORDINATES: similar to AA sequence:RefSeq:WP_020201239.1
GO:0008777 - acetylornithine deacetylase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020227744.1
COORDINATES: protein motif:HMM:NF020650.2
COORDINATES: similar to AA sequence:RefSeq:WP_014871572.1
COORDINATES: similar to AA sequence:RefSeq:WP_020090739.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018388740.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_013169044.1
COORDINATES: similar to AA sequence:RefSeq:WP_018422840.1
COORDINATES: similar to AA sequence:RefSeq:WP_018418462.1
COORDINATES: similar to AA sequence:RefSeq:WP_018422836.1
COORDINATES: similar to AA sequence:RefSeq:WP_017483580.1
COORDINATES: similar to AA sequence:RefSeq:WP_018422834.1
COORDINATES: similar to AA sequence:RefSeq:WP_018422833.1
COORDINATES: similar to AA sequence:RefSeq:WP_018422832.1
COORDINATES: similar to AA sequence:RefSeq:WP_007178855.1
COORDINATES: similar to AA sequence:RefSeq:WP_013690415.1
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_013690416.1
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016347212.1
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: similar to AA sequence:RefSeq:WP_018420999.1
COORDINATES: similar to AA sequence:RefSeq:WP_006048271.1
COORDINATES: similar to AA sequence:RefSeq:WP_006223022.1
COORDINATES: similar to AA sequence:RefSeq:WP_011903021.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020067521.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013343405.1
COORDINATES: similar to AA sequence:RefSeq:WP_017777567.1
GO:0015297 - antiporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018314319.1
COORDINATES: protein motif:HMM:NF025694.2
COORDINATES: similar to AA sequence:RefSeq:WP_006157369.1
COORDINATES: similar to AA sequence:RefSeq:WP_013749038.1
COORDINATES: similar to AA sequence:RefSeq:WP_018263925.1
COORDINATES: protein motif:HMM:NF012742.2
COORDINATES: similar to AA sequence:RefSeq:WP_018422864.1
GO:0004497 - monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007182611.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007182612.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182613.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_013338194.1
COORDINATES: protein motif:HMM:NF013442.2
COORDINATES: similar to AA sequence:RefSeq:WP_012428219.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051489.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193169.1
COORDINATES: similar to AA sequence:RefSeq:WP_013691278.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051492.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051493.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006161377.1
COORDINATES: similar to AA sequence:RefSeq:WP_017773575.1
GO:0008465 - glycerate dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017773574.1
GO:0016836 - hydro-lyase activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017773573.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051498.1
COORDINATES: similar to AA sequence:RefSeq:WP_006580072.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014724805.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050452.1
COORDINATES: similar to AA sequence:RefSeq:WP_007733724.1
COORDINATES: similar to AA sequence:RefSeq:WP_013339610.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013339611.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770856.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050447.1
COORDINATES: similar to AA sequence:RefSeq:WP_020066043.1
gamma-glutamyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017775846.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006227198.1
heavy metal response regulator transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_013690846.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002718604.1
COORDINATES: similar to AA sequence:RefSeq:WP_013690844.1
COORDINATES: similar to AA sequence:RefSeq:WP_013091844.1
beta-propeller fold lactonase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012433606.1
GO:0006629 - lipid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008573087.1
COORDINATES: similar to AA sequence:RefSeq:WP_003266113.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008347443.1
COORDINATES: similar to AA sequence:RefSeq:WP_018424397.1
four-carbon acid sugar kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018312659.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_007178858.1
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007178859.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011487363.1
COORDINATES: similar to AA sequence:RefSeq:WP_007577316.1
COORDINATES: similar to AA sequence:RefSeq:WP_006758559.1
outer membrane protein assembly factor BamA
COORDINATES: similar to AA sequence:RefSeq:WP_018900343.1
COORDINATES: similar to AA sequence:RefSeq:WP_018421971.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007732225.1
COORDINATES: similar to AA sequence:RefSeq:WP_018424382.1
COORDINATES: similar to AA sequence:RefSeq:WP_012328048.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018420532.1
type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017774965.1
COORDINATES: similar to AA sequence:RefSeq:WP_007732342.1
COORDINATES: similar to AA sequence:RefSeq:WP_010094958.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013588696.1
GO:0008838 - diaminopropionate ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010094953.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008919977.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
branched-chain amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007737903.1
COORDINATES: similar to AA sequence:RefSeq:WP_013339001.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: similar to AA sequence:RefSeq:WP_007182005.1
COORDINATES: similar to AA sequence:RefSeq:WP_007913069.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011519623.1
COORDINATES: similar to AA sequence:RefSeq:WP_008008720.1,RefSeq:WP_014251890.1
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007579916.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051675.1
COORDINATES: similar to AA sequence:RefSeq:WP_010814285.1
COORDINATES: similar to AA sequence:RefSeq:WP_011297902.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051672.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051671.1
GO:0005267 - potassium channel activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013343230.1
PAS domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_018245115.1
COORDINATES: similar to AA sequence:RefSeq:WP_007681152.1
COORDINATES: similar to AA sequence:RefSeq:WP_014159583.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492749.1
COORDINATES: similar to AA sequence:RefSeq:WP_013342372.1
COORDINATES: similar to AA sequence:RefSeq:WP_013819597.1
COORDINATES: similar to AA sequence:RefSeq:WP_018419949.1
COORDINATES: similar to AA sequence:RefSeq:WP_006052115.1
GO:0006835 - dicarboxylic acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014192818.1
COORDINATES: similar to AA sequence:RefSeq:WP_006052113.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741017.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741016.1
ATP citrate lyase citrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013094623.1
COORDINATES: similar to AA sequence:RefSeq:WP_017777570.1
COORDINATES: similar to AA sequence:RefSeq:WP_017777571.1
COORDINATES: similar to AA sequence:RefSeq:WP_010219494.1
COORDINATES: similar to AA sequence:RefSeq:WP_013338290.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008876962.1
cyclic nucleotide-binding domain-containing thioredoxin-disulfide reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013089076.1
GO:0008171 - O-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006163311.1
COORDINATES: similar to AA sequence:RefSeq:WP_012948683.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880340.1
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: similar to AA sequence:RefSeq:WP_006159523.1
COORDINATES: similar to AA sequence:RefSeq:WP_013338917.1
COORDINATES: similar to AA sequence:RefSeq:WP_006159525.1
COORDINATES: similar to AA sequence:RefSeq:WP_006159526.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006159527.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014350386.1
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: similar to AA sequence:RefSeq:WP_008923614.1
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004528234.1
COORDINATES: similar to AA sequence:RefSeq:WP_012402918.1
COORDINATES: similar to AA sequence:RefSeq:WP_007178447.1
COORDINATES: similar to AA sequence:RefSeq:WP_012433082.1
COORDINATES: similar to AA sequence:RefSeq:WP_006155918.1
COORDINATES: protein motif:HMM:NF012354.2
COORDINATES: protein motif:HMM:NF021517.2
COORDINATES: similar to AA sequence:RefSeq:WP_007741193.1
COORDINATES: protein motif:HMM:NF019016.2
COORDINATES: similar to AA sequence:RefSeq:WP_020067945.1
COORDINATES: similar to AA sequence:RefSeq:WP_006756511.1
cytochrome C oxidase subunit IV family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003261352.1
heme-copper oxidase subunit III family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017334946.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432345.1
COORDINATES: similar to AA sequence:RefSeq:WP_003261357.1
COORDINATES: similar to AA sequence:RefSeq:WP_018425338.1
COORDINATES: protein motif:HMM:NF022072.2
COORDINATES: similar to AA sequence:RefSeq:WP_013587326.1
GO:0006749 - glutathione metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007576410.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007576407.1
COORDINATES: similar to AA sequence:RefSeq:WP_018433168.1
GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004554674.1
COORDINATES: similar to AA sequence:RefSeq:WP_014971971.1
COORDINATES: similar to AA sequence:RefSeq:WP_018485248.1
COORDINATES: similar to AA sequence:RefSeq:WP_013690824.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405482.1
COORDINATES: similar to AA sequence:RefSeq:WP_004259965.1
COORDINATES: similar to AA sequence:RefSeq:WP_007742907.1
COORDINATES: similar to AA sequence:RefSeq:WP_008347949.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016348118.1
COORDINATES: similar to AA sequence:RefSeq:WP_009572692.1
COORDINATES: similar to AA sequence:RefSeq:WP_014252504.1
aromatic acid/H+ symport family MFS transporter
COORDINATES: protein motif:HMM:NF017532.2
phytanoyl-CoA dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013697598.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051366.1
COORDINATES: similar to AA sequence:RefSeq:WP_013697600.1
COORDINATES: similar to AA sequence:RefSeq:WP_007583872.1
COORDINATES: similar to AA sequence:RefSeq:WP_020069309.1
COORDINATES: similar to AA sequence:RefSeq:WP_007583876.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341025.1
COORDINATES: similar to AA sequence:RefSeq:WP_013587329.1
COORDINATES: similar to AA sequence:RefSeq:WP_015001934.1
COORDINATES: similar to AA sequence:RefSeq:WP_015001935.1
COORDINATES: similar to AA sequence:RefSeq:WP_013697682.1
COORDINATES: similar to AA sequence:RefSeq:WP_018991109.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405454.1
COORDINATES: similar to AA sequence:RefSeq:WP_019451734.1
COORDINATES: protein motif:HMM:NF041602.1
COORDINATES: similar to AA sequence:RefSeq:WP_007582864.1
COORDINATES: similar to AA sequence:RefSeq:WP_013092729.1
COORDINATES: similar to AA sequence:RefSeq:WP_011490873.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020066792.1
COORDINATES: similar to AA sequence:RefSeq:WP_011490871.1
COORDINATES: similar to AA sequence:RefSeq:WP_020066790.1
ATP-binding protein/SpoIIE family protein phosphatase
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_003540836.1
COORDINATES: similar to AA sequence:RefSeq:WP_014900233.1
COORDINATES: similar to AA sequence:RefSeq:WP_006891677.1
COORDINATES: similar to AA sequence:RefSeq:WP_008344701.1
COORDINATES: similar to AA sequence:RefSeq:WP_014899135.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007579459.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0050311 - sulfite reductase (ferredoxin) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006046834.1
COORDINATES: similar to AA sequence:RefSeq:WP_013588011.1
GO:0016159 - muconolactone delta-isomerase activity [Evidence IEA]
GO:0042952 - beta-ketoadipate pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007748927.1
GO:0018850 - chloromuconate cycloisomerase activity [Evidence IEA]; GO:0018849 - muconate cycloisomerase activity [Evidence IEA]
muconate/chloromuconate family cycloisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_007748925.1
COORDINATES: similar to AA sequence:RefSeq:WP_007581043.1
GO:0018576 - catechol 1,2-dioxygenase activity [Evidence IEA]
GO:0019615 - catechol catabolic process, ortho-cleavage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020066093.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011695017.1
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014251995.1
benzoate 1,2-dioxygenase electron transfer component BenC
COORDINATES: similar to AA sequence:RefSeq:WP_008347595.1
COORDINATES: similar to AA sequence:RefSeq:WP_014251997.1
COORDINATES: similar to AA sequence:RefSeq:WP_012700408.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
PEP/pyruvate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008970898.1
COORDINATES: similar to AA sequence:RefSeq:WP_011803358.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008327162.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013338213.1
COORDINATES: similar to AA sequence:RefSeq:WP_008353518.1
GO:0015499 - formate transmembrane transporter activity [Evidence IEA]
GO:0015724 - formate transport [Evidence IEA]
formate/nitrite transporter family protein
COORDINATES: protein motif:HMM:NF013625.2
GO:0042834 - peptidoglycan binding [Evidence IEA]
peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007181938.1
COORDINATES: similar to AA sequence:RefSeq:WP_011694947.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049379.1
GO:0016846 - carbon-sulfur lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013342199.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006048728.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007738016.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009771125.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014194020.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771124.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008346615.1
COORDINATES: similar to AA sequence:RefSeq:WP_008346617.1
COORDINATES: similar to AA sequence:RefSeq:WP_006048735.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771121.1
COORDINATES: similar to AA sequence:RefSeq:WP_014194025.1
COORDINATES: similar to AA sequence:RefSeq:WP_007738031.1
COORDINATES: similar to AA sequence:RefSeq:WP_020655333.1
COORDINATES: similar to AA sequence:RefSeq:WP_015866169.1
COORDINATES: similar to AA sequence:RefSeq:WP_020067771.1
COORDINATES: similar to AA sequence:RefSeq:WP_020067770.1
COORDINATES: similar to AA sequence:RefSeq:WP_013339698.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008347227.1
COORDINATES: similar to AA sequence:RefSeq:WP_019718996.1
COORDINATES: similar to AA sequence:RefSeq:WP_010089703.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046936.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006046753.1
COORDINATES: similar to AA sequence:RefSeq:WP_010099611.1
COORDINATES: similar to AA sequence:RefSeq:WP_013689493.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770581.1
COORDINATES: similar to AA sequence:RefSeq:WP_017774884.1
COORDINATES: similar to AA sequence:RefSeq:WP_007734666.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347199.1
COORDINATES: similar to AA sequence:RefSeq:WP_012433088.1
COORDINATES: similar to AA sequence:RefSeq:WP_012433087.1
GO:0042834 - peptidoglycan binding [Evidence IEA]; GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007580805.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492133.1
COORDINATES: similar to AA sequence:RefSeq:WP_020070893.1
COORDINATES: similar to AA sequence:RefSeq:WP_012434617.1
COORDINATES: similar to AA sequence:RefSeq:WP_020070896.1
COORDINATES: similar to AA sequence:RefSeq:WP_004633909.1
GO:0003994 - aconitate hydratase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
COORDINATES: protein motif:HMM:NF024799.2
COORDINATES: similar to AA sequence:RefSeq:WP_012428443.1
COORDINATES: similar to AA sequence:RefSeq:WP_011490664.1
COORDINATES: similar to AA sequence:RefSeq:WP_003214523.1
COORDINATES: similar to AA sequence:RefSeq:WP_003214524.1
COORDINATES: similar to AA sequence:RefSeq:WP_017777573.1
COORDINATES: similar to AA sequence:RefSeq:WP_006411212.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012234174.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347031.1
GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]; GO:0033219 - urea binding [Evidence IEA]
GO:0015840 - urea transport [Evidence IEA]
urea ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007176232.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_007176233.1
COORDINATES: similar to AA sequence:RefSeq:WP_007176234.1
COORDINATES: similar to AA sequence:RefSeq:WP_018421041.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427605.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347037.1
COORDINATES: similar to AA sequence:RefSeq:WP_008348127.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427602.1
COORDINATES: similar to AA sequence:RefSeq:WP_007176240.1
COORDINATES: similar to AA sequence:RefSeq:WP_008917638.1
COORDINATES: similar to AA sequence:RefSeq:WP_018433293.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405009.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611586.1
COORDINATES: similar to AA sequence:RefSeq:WP_004532900.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:NP_250572.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046917.1
COORDINATES: similar to AA sequence:RefSeq:WP_007577590.1
COORDINATES: similar to AA sequence:RefSeq:WP_006403462.1
COORDINATES: similar to AA sequence:RefSeq:WP_004187792.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013862.2
COORDINATES: similar to AA sequence:RefSeq:WP_007182777.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182774.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182773.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427470.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182771.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182770.1
COORDINATES: protein motif:HMM:NF013188.2
COORDINATES: similar to AA sequence:RefSeq:WP_007736805.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: protein motif:HMM:NF012382.2
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_011694862.1
COORDINATES: protein motif:HMM:NF013492.2
COORDINATES: similar to AA sequence:RefSeq:WP_015437974.1
COORDINATES: similar to AA sequence:RefSeq:WP_011546883.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182647.1
COORDINATES: similar to AA sequence:RefSeq:WP_007738725.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341279.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013341278.1
COORDINATES: similar to AA sequence:RefSeq:WP_013689193.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013689194.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049778.1
COORDINATES: similar to AA sequence:RefSeq:WP_013689196.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
type VI secretion system contractile sheath small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006049776.1
GO:0033104 - type VI protein secretion system complex [Evidence IEA]
type VI secretion system contractile sheath large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013689198.1
type VI secretion system tube protein Hcp
COORDINATES: similar to AA sequence:RefSeq:WP_013341668.1
type VI secretion system baseplate subunit TssE
COORDINATES: similar to AA sequence:RefSeq:WP_017171635.1
type VI secretion system baseplate subunit TssF
COORDINATES: similar to AA sequence:RefSeq:WP_013689202.1
type VI secretion system baseplate subunit TssG
COORDINATES: similar to AA sequence:RefSeq:WP_013341665.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013341664.1
TcdA/TcdB catalytic glycosyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF015505.2
GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]
YopT-type cysteine protease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013689206.1
type VI secretion system tip protein TssI/VgrG
COORDINATES: similar to AA sequence:RefSeq:WP_013341661.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341660.1
type VI secretion system-associated FHA domain protein TagH
COORDINATES: similar to AA sequence:RefSeq:WP_013341659.1
type VI secretion system baseplate subunit TssK
COORDINATES: similar to AA sequence:RefSeq:WP_006049763.1
type IVB secretion system protein IcmH/DotU
COORDINATES: similar to AA sequence:RefSeq:WP_006049762.1
type VI secretion system membrane subunit TssM
COORDINATES: similar to AA sequence:RefSeq:WP_006049761.1
type VI secretion system-associated protein TagF
COORDINATES: similar to AA sequence:RefSeq:WP_006049760.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341653.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341652.1
COORDINATES: similar to AA sequence:RefSeq:WP_007180429.1
COORDINATES: similar to AA sequence:RefSeq:WP_007578106.1
COORDINATES: similar to AA sequence:RefSeq:WP_018310013.1
Tn3 family transposase post-transcriptional regulator TnpC
COORDINATES: protein motif:HMM:NF033527.1
COORDINATES: protein motif:HMM:NF025079.2
COORDINATES: similar to AA sequence:RefSeq:WP_013689216.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341651.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013689218.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341649.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341650.1
COORDINATES: similar to AA sequence:RefSeq:WP_086557970.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741379.1
GO:0051983 - regulation of chromosome segregation [Evidence IEA]
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_011117139.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012218041.1
COORDINATES: similar to AA sequence:RefSeq:WP_007733814.1
COORDINATES: similar to AA sequence:RefSeq:WP_008648467.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406486.1
COORDINATES: similar to AA sequence:RefSeq:WP_013339794.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177213.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177214.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491810.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011491811.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]
molybdate ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007177217.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_018423149.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491813.1
COORDINATES: similar to AA sequence:RefSeq:WP_014725873.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177220.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177221.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491817.1
NifX-associated nitrogen fixation protein
COORDINATES: similar to AA sequence:RefSeq:WP_011880153.1
GO:0051540 - metal cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007177224.1
nitrogenase iron-molybdenum cofactor biosynthesis protein NifN
COORDINATES: similar to AA sequence:RefSeq:WP_011491819.1
nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
COORDINATES: similar to AA sequence:RefSeq:WP_011491820.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491821.1
COORDINATES: similar to AA sequence:RefSeq:WP_017773471.1
nitrogenase molybdenum-iron protein subunit beta