Harpia harpyja isolate bHarHar1 chromosome 27, bHarHar1 primary haplotype, whole genome shotgun sequence.
type: Entry
definition: Harpia harpyja isolate bHarHar1 chromosome 27, bHarHar1 primary haplotype, whole genome shotgun sequence.
sequence version: NC_068966.1
sequence date: 2023-02-26
sequence: sequence
division: CON
label: NC_068966.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA910140
dblink: SAMN31530492
keyword: WGS
keyword: RefSeq
source: Harpia harpyja (harpy eagle)
organism: Harpia harpyja
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Accipitriformes; Accipitridae; Accipitrinae; Harpia.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM048740.1.\nAssembly name: bHarHar1 primary haplotype\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2022/11/27. The original whole-genome shotgun project has the\naccession JAPMHW000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 28-SEP-2021\nAssembly Method :: Hifiasm v. 0.15.1-r334; purge_dups v.\n 1.2.5; Bionano solve v. 3.6; Salsa v. 2.3\nAssembly Name :: bHarHar1 primary haplotype\nDiploid :: Principal Haplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 54.0x\nSequencing Technology :: PacBio Sequel II HiFi; Bionano optical\n mapping; Arima HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Updated annotation\nAnnotation Name :: GCF_026419915.1-RS_2023_02\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 02/25/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 163683
topology: linear
so has quality: SO_0000987
location: 1..163683
location: region:1-163683:1
RO_0002162: 202280

NC_068966
type: RefSeq
SIO_000068: refseq

PRJNA910140
type: BioProject
SIO_000068: bioproject

SAMN31530492
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163683:1
position: 163683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-163683:1:source
so part of: sequence
organism: Harpia harpyja
mol type: genomic DNA
isolate: bHarHar1
chromosome: 27
sex: female
tissue type: blood
dev stage: adult
country: Brazil: Sao Jose do Laguinho / / Gleba Vila Amazonia in the municipality of Parintins
lat lon: 2.625833 S 56.649722 W
collection date: 2002-06-24
collected by: Tomas Hrbek

202280
type: Taxonomy
SIO_000068: taxonomy

EEF1G
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: EEF1G
note: eukaryotic translation elongation factor 1 gamma; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 91..583
location: region:91-583:1
so has part: feature:91-583:1:exon
subclass of: SO_0000010

128136002
type: Gene
SIO_000068: ncbigene

position:91:1
position: 91
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583:1
position: 583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91-583:1:exon

EEF1G
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: EEF1G
product: eukaryotic translation elongation factor 1 gamma
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775097.1
SIO_010081: EEF1G
subclass of: SO_0000673
so part of: EEF1G
location: join(91..233,326..583)
location: region:91-583:1
so has part: feature:91-233:1:exon
so has part: feature:326-583:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91-233:1:exon

position:233:1
position: 233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326-583:1:exon

position:326:1
position: 326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EEF1G
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: EEF1G
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongation factor 1-gamma
translation: MFQRLDKLRKNAFASVILFGTNNDSSISGVWLFRGQELAFPLSPDWQVDYESYTWRKLDSESAECKTLVKEYFLWEGEFKHVGKPFNQGQDL
SIO_010081: EEF1G
subclass of: SO_0000673
so part of: EEF1G
location: join(111..233,326..481)
location: region:111-481:1
so has part: feature:111-233:1:exon
so has part: feature:326-481:1:exon

XP_052631057.1
type: Protein
SIO_000068: ncbiprotein

position:111:1
position: 111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481:1
position: 481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111-233:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326-481:1:exon

LOC128136003
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128136003
note: basic proline-rich protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6171..13622)
location: region:6171-13622:-1
so has part: feature:6171-13622:-1:exon
subclass of: SO_0000010

128136003
type: Gene
SIO_000068: ncbigene

position:6171:-1
position: 6171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13622:-1
position: 13622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6171-13622:-1:exon

LOC128136003
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LOC128136003
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_052775098.1
SIO_010081: LOC128136003
subclass of: SO_0000673
so part of: LOC128136003
location: complement(join(6171..6992,9993..10607,13431..13622))
location: region:6171-13622:-1
so has part: feature:13431-13622:-1:exon
so has part: feature:9993-10607:-1:exon
so has part: feature:6171-6992:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13431-13622:-1:exon

position:13431:-1
position: 13431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9993-10607:-1:exon

position:9993:-1
position: 9993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10607:-1
position: 10607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6171-6992:-1:exon

position:6992:-1
position: 6992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128136003
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LOC128136003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MAGRRPTGLRVAWLEKRVGRAWGDLGGPIPPHPPRGSARSVAAGGTIRPPRNRLENSTPAEAKQLRGATGAPPTPPPPCTHGIVPGSPEPPRDAPLNSRHHRSPPPPRDTTGTVPGSPEPPPPGHPALHPRDQRDGPGTTGAPPGRSRDQRSPPGTLHPAPPGPPGPPEPPRDGPGTPGAPPGRSTLHPRDHRDRPGTTGAPPGRSRDPRSPPRATPPCTPGTVPGPPGAPGTVPGPPKPPPPGTVPLDSRAGPGTPGTPGPPPPGPHPSRSQFSVPVPNPGPSSQFPGPRSQFSVPVPNPGPSSQFPSPRSRFSVPVPNPGPSSQFPSPSPGSRSQFPIPVPVPRSRSPVPSPSSPVPVPVPNPSPGFPVPVPVLGPSSQSRSRFPGPGPLFPVPVPQSQFPIPVPVPQSQFLVPVPNPGPSALFPVPVPQSWSQFSVPVPNPSPSSQSQFPIPVPVPCSQSRFPSPSSQSQFPIPVPVPQSPIPVLVLGPSSQSRFPVPGSPVPVLVPQSQSRSQSPVPGPSPGPSSSSRSQFPIPVLVP
SIO_010081: LOC128136003
subclass of: SO_0000673
so part of: LOC128136003
location: complement(join(6171..6992,9993..10607,13431..13622))
location: region:6171-13622:-1
so has part: feature:13431-13622:-1:exon
so has part: feature:9993-10607:-1:exon
so has part: feature:6171-6992:-1:exon

XP_052631058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13431-13622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9993-10607:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6171-6992:-1:exon

AHNAK
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: AHNAK
note: AHNAK nucleoprotein; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15198..35328
location: region:15198-35328:1
so has part: feature:15198-35328:1:exon
subclass of: SO_0000010

128136009
type: Gene
SIO_000068: ncbigene

position:15198:1
position: 15198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35328:1
position: 35328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15198-35328:1:exon

AHNAK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: AHNAK
product: AHNAK nucleoprotein
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 15 bases in 13 codons; deleted 4 bases in 3 codons
transcript id: XM_052775105.1
SIO_010081: AHNAK
subclass of: SO_0000673
so part of: AHNAK
location: join(15198..15290,15433..15586,15849..16036,16123..35328)
location: region:15198-35328:1
so has part: feature:15198-15290:1:exon
so has part: feature:15433-15586:1:exon
so has part: feature:15849-16036:1:exon
so has part: feature:16123-35328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15198-15290:1:exon

position:15290:1
position: 15290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15433-15586:1:exon

position:15433:1
position: 15433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15586:1
position: 15586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15849-16036:1:exon

position:15849:1
position: 15849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16036:1
position: 16036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16123-35328:1:exon

position:16123:1
position: 16123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AHNAK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: AHNAK
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 15 bases in 13 codons; deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: neuroblast differentiation-associated protein AHNAK
translation: MEKEEETREILLPNWQGSGSHGITIDQTDDGVFVKRVQQNSPAAKMGVVKEGDQIVSATVYFDNLQSGEVTQLLNSMGHHTVGLRLQRKGDKSPLPGQSWSHDVFAASSPEVVLSGDDEEYRRIYTTKIKPRLKSEEAVEAECGGTQSRTITVTRKVTAYTVDVTRHDGAKDVDVVGPDFKIRIPTQEITHVMKTDVETEPGKTVIKMAPGDLPGRSTQATDRSMDIRGAPPGPTAESSAQKLDVHLGEARFGKPGITLSGTQMMGVHLRTQTDPTLPGSQVPAGETGKSVTVEMPGRNVSGTAFLGPQGSSPRIEANGQMGNLDAGFHVKGPRLDGKGHVSGVDVQGELRGGMLSHADASAPCLQGDIKAPGVDVSLPAMENPAVDVGKIKIPVLKMPRFGFQTAGSGIEAQAPQVGTDVPVPKPQAPCVDVASSSVHITGPEVSAPSVKFSKPQVDMGLKGAVKVPSPGLEVPGVAIKGPSVELPASDADVHGGKGKLKIPHMTVPKFTALDSQGEGPVLEMVLPKGEVGPAASKVNVGVPDVAIKGEWKGPQFKKVETPQISLSDVNLNLKGPQVKGDMGVAVPRVEGDVKGVGSKGLTMDVKAPDVEFESPEGYLKGPSISAPGMDINVKGPKLKGEVDVSIPKMGGNLKGPQLDIKGPRVGMDMPDVEVKGPKVTMPEVHVKTPQISMPDIDLNLKGPRAKGDLDVSAPKLEGELKAPGLDIKGPKVDIEAPDVDVHGPEGKLKMPKLKMPKFGVPGLKGEGPDLDVTLPKGEVDVSGPRVDIDLPSVDVKGPEGKLKGPKVKMPEMHITAPKVSVPDVDLNLKGPKLKGDVDVSXAVGADLKGPELELKGPKVDIEAPDVDIHGPEGKLKMPKLKMPKFGVPGLKGERPDLDVTLPKGEVDVSGPSVDIDVPSVGVKGPEGKLQGPKVTMPEMSFKTPQISMPDIDLNLRSRAKGDLDVFCPKTGRGAEAPGLDIKGPKVDIEAPDVDIHGPGGKLKMPKLKMPKFGVPGLKGEGPDLDVTLPKGEVDVSXGPRVDIDLPSVDVEGPEGKLKGPKVKMPEMHITAPKVSVPDVDLNLKGPKLKGDVDVSVPAVGADLKGPELELKGPKVDIEAPDVDIHGPEGKLKMPKLKMPKFGVPGLKGERPDLDVTLPKGEVDISGPRVDIDVPSVDIEGPEGKGKGLKFKMPELNIQTPKLSMPDVDLSLKAPKLKGDADISGPKTSVDLKGQGPKIEVEGPKVDVDMPEVDLECPEGKIKGPKFKMPKLNIKAPKISMPDVDLNLKGHKXKGEMDVSLPKIEGDLKESGVSIKGPKIDVEVPDVNLECPEGNLKMPQMKLPHFNVSGPKFEGADIDVNLPKGEIDISGPEADIEGPELDVGGPEGKWKGPKFRMPKLNIKTPKISMPDVDLNLKGPKVKGEMDIAAPKIEGDLKGPQIDIKGPKLDVEAPNIDLECPEGKLKGPKFKMPEMHIKAPKISMPDVDFNLKGPSVKGDIEVSAPKLEGDLKGPEVDIKGPKVDIEAPDVDIHGPEGKFKMPKFKMPKFGMPGLKAEGPEVDVNLPTESLDVSGPKVDIEGPELDIEGPEGKLKGPKFKMPEMHIKTHKISMPDVDLNLKGPKVKGGVDVSVPKLEGDLKGPEVDIKGPKVDIEAPDVDIHGPEGKFKMPKFXMPKFGMPGFKAEGPEVDVNLPTGSLDVSGPKVDIEGPELDIEGPEGKLKGPKFKMPEMHIKTPKISMPDIDLNLKGPKVKGDVDISVPKLEGDLKGPEIDIKGPKVDVDLPDVELEGPEGKLKGPKFKMPEMHFKAPKVSMPDVDFNLKGPKLKGDVDVSVPKLEGDLKGPXVDIKGPKVDIEAPDVDIQGPEGKFKMPKFKMPKFGMPGFKAEGPEVDVNLPTGSLDVSGPKVDIEGPEVDIEGPEGKLKGPKFKMPEMHIKTPKISMPDIDLNLKGPKVKGDVDVSCPKLEGDLKGPGIDIKGPKVDVDLPDVELEGPEGKLKGPKF…
SIO_010081: AHNAK
subclass of: SO_0000673
so part of: AHNAK
location: join(15433..15586,15849..16036,16123..34330)
location: region:15433-34330:1
so has part: feature:15433-15586:1:exon
so has part: feature:15849-16036:1:exon
so has part: feature:16123-34330:1:exon

XP_052631065.1
type: Protein
SIO_000068: ncbiprotein

position:34330:1
position: 34330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15433-15586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15849-16036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16123-34330:1:exon

B4GAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: B4GAT1
note: beta-1,4-glucuronyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(37713..44831)
location: region:37713-44831:-1
so has part: feature:37713-44831:-1:exon
subclass of: SO_0000010

128136005
type: Gene
SIO_000068: ncbigene

position:37713:-1
position: 37713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44831:-1
position: 44831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37713-44831:-1:exon

B4GAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: B4GAT1
product: beta-1,4-glucuronyltransferase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_052775101.1
SIO_010081: B4GAT1
subclass of: SO_0000673
so part of: B4GAT1
location: complement(join(37713..37724,39492..39714,42902..44831))
location: region:37713-44831:-1
so has part: feature:42902-44831:-1:exon
so has part: feature:39492-39714:-1:exon
so has part: feature:37713-37724:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42902-44831:-1:exon

position:42902:-1
position: 42902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39492-39714:-1:exon

position:39492:-1
position: 39492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39714:-1
position: 39714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:37713-37724:-1:exon

position:37724:-1
position: 37724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

B4GAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: B4GAT1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: beta-1,4-glucuronyltransferase 1
translation: MPPPRGVLDTSGTFRVYRDLLGTPPRWDPPELVLATHGTPGRVAGTLGGALGGLWGGPLSVAVFGVPKEGLGGLLAALGGPCRGLRPRLRFHVVVGAAAPPPVVPPNPGPPTPGGCRGALRRLAAADPPSYTLGVPYPGNLLRNVAWAGAAEEERGGPSRKGGPGPPKIGGRFVLLLDADVVPSRGLREEFLRLLREGGAGLRPPKWGAGGGLGDPLVRGAAGVLGDPPAVGAAGFLGDPPGLGAAGLLGDPKAWGAAGVLGDPRTRRAPGGLGVPGDPGVLNALEVPNGLGVPSVPGVPNTISNGGVPHALEVPKVPNAFRDPGVPNALEVPKGFHDRGVPNALEVPNALEVPKGFHDRGVPNALEVPNAFRDRGVPNALEVPRGFHDRGVPNALEVPNTLEVPKGFHDPGVPNALEVPNAFRDRGVPNALEVPKGFRDRGVPNTLEVPNAFHDPGVPNALEVPNAFHDPGVPNALEDPNFLKHPKALEDPNPPGATTPSWDQVVFVLPAFEVRAGTRVPGTKAELLQLWGTGDARPFYGALCPRCQAPTGYERWRALPPTPHLRVAYEAPWRDPWEPFYVGPAHGVPPFDERFLQYGFNRISQACELHVAGFHFAVLDGAFVVHRGFKEAGGFHGGREAELHRNRQLFRRFRAELHQRYPRSPRRC
SIO_010081: B4GAT1
subclass of: SO_0000673
so part of: B4GAT1
location: complement(join(39523..39714,42902..44717))
location: region:39523-44717:-1
so has part: feature:42902-44717:-1:exon
so has part: feature:39523-39714:-1:exon

XP_052631061.1
type: Protein
SIO_000068: ncbiprotein

position:39523:-1
position: 39523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44717:-1
position: 44717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42902-44717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39523-39714:-1:exon

LOC128135995
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128135995
note: fibroin heavy chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(49052..57371)
location: region:49052-57371:-1
so has part: feature:49052-57371:-1:exon
subclass of: SO_0000010

128135995
type: Gene
SIO_000068: ncbigene

position:49052:-1
position: 49052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57371:-1
position: 57371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49052-57371:-1:exon

LOC128135995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LOC128135995
product: fibroin heavy chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_052775090.1
SIO_010081: LOC128135995
subclass of: SO_0000673
so part of: LOC128135995
location: complement(join(49052..49328,49678..52131,52371..52503,53064..53173,53436..53682,54404..54506,54690..54841,57160..57371))
location: region:49052-57371:-1
so has part: feature:57160-57371:-1:exon
so has part: feature:54690-54841:-1:exon
so has part: feature:54404-54506:-1:exon
so has part: feature:53436-53682:-1:exon
so has part: feature:53064-53173:-1:exon
so has part: feature:52371-52503:-1:exon
so has part: feature:49678-52131:-1:exon
so has part: feature:49052-49328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57160-57371:-1:exon

position:57160:-1
position: 57160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:54690-54841:-1:exon

position:54690:-1
position: 54690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54841:-1
position: 54841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:54404-54506:-1:exon

position:54404:-1
position: 54404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54506:-1
position: 54506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:53436-53682:-1:exon

position:53436:-1
position: 53436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53682:-1
position: 53682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:53064-53173:-1:exon

position:53064:-1
position: 53064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53173:-1
position: 53173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:52371-52503:-1:exon

position:52371:-1
position: 52371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52503:-1
position: 52503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:49678-52131:-1:exon

position:49678:-1
position: 49678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52131:-1
position: 52131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:49052-49328:-1:exon

position:49328:-1
position: 49328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128135995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LOC128135995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroin heavy chain-like
translation: MLRSTKGASKARRDQINAEIRALRDLLPLPEGDRPRLSYLHVMALACIYTRKGACLRPGPARGAPMELLGGPELADLVASLPGFLLAVTREGKLVGVTDNVAQHLGHSMVDLVAQGDSIYDLLDPADHPLVRHQLTLPGPPQAERLFRCRFTTSRASRRPSAGRKLVLLRGRFQAPPGPPGAPPGLFVAFCAPLDPPPWPCPDCLLLPAFQSRHARDLALLDISDSVLIHLGYGRGELLGRSWYRLLHPEDLGHVARQHLRLAGAGAEARGELVTRLQRKDGLGWTWVYARLRPEGPALLAHNFVISEAEAWCLRQQLAAEAPPGPPEPFGPSLDFPGAAIGAGGDLGVGADPSIGLGVGPGIGSGVDLGVGSGLGDDIGANVGVNVGLGLGVNVGCGLGADVGHGLGAGLGASVDPAVGAGVGPGLGANMGPGLDANMGPGLGAAIGHGLGGNVGANIDPGLGAGVGANVGRGLGDGVGHGLGSDVSAGVGIGVGAGIRVDVGLGVAAGTGADVGPNLGADIGAALGAGAGDDVGAGLQANGGADTGPSLGAGVALSVGANIGPGLGGGVRASVGLGIGAVGPALPSDVGAGVGLTVGASVGANIGAGVSAGVGLGLGANIGANVGPSLGSTVGLGVGAALGANVGSALSSGVGPGVGLAVGAAVGANVGSGLGSSVGLAVGAGVGANVGSGLGSGVGLAVGAGVGANVGPSLGSGVGLAIGAGVGANVGAALGSDVDVGVGLGVGANVGTALTSDVGSGVGLGIGAAVGANIGAGVGSGLGSSVGLGLGANVGSNIGSAPGSDVGAGIGLAVGAGVGGSSGSGLGSALGFAVGAALGANVGSGLGPDVGTTVGLSLGANIGANVDSALGTSIDTGIGLGAGANVGSGVVLGAGAAVGANAGSALGSTIGLGLGASVDPALGSGVGLGVGAAIGANVGTALGTGLGLGANLAAGVGSSLGPAIGPTLGAVGGANAGVGLAAGARLAPGLGIPEVPGGSTETWTPPYTPRQAPPFAFGPLEPPEAAPEKLPPSPESPGGIPGGTPGSLLTPETSPPPPPSAPPGPALRRLLQGLAAAAVVNRGGARRSGGTPSPRPPPPAPVAPRPLR
SIO_010081: LOC128135995
subclass of: SO_0000673
so part of: LOC128135995
location: complement(join(49725..52131,52371..52503,53064..53173,53436..53682,54404..54506,54690..54841,57160..57334))
location: region:49725-57334:-1
so has part: feature:57160-57334:-1:exon
so has part: feature:54690-54841:-1:exon
so has part: feature:54404-54506:-1:exon
so has part: feature:53436-53682:-1:exon
so has part: feature:53064-53173:-1:exon
so has part: feature:52371-52503:-1:exon
so has part: feature:49725-52131:-1:exon

XP_052631050.1
type: Protein
SIO_000068: ncbiprotein

position:49725:-1
position: 49725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57334:-1
position: 57334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57160-57334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54690-54841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54404-54506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53436-53682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:53064-53173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52371-52503:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49725-52131:-1:exon

ZNHIT2
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: ZNHIT2
note: zinc finger HIT-type containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(60403..62312)
location: region:60403-62312:-1
so has part: feature:60403-62312:-1:exon
subclass of: SO_0000010

128136006
type: Gene
SIO_000068: ncbigene

position:60403:-1
position: 60403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62312:-1
position: 62312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60403-62312:-1:exon

ZNHIT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: ZNHIT2
product: zinc finger HIT-type containing 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_052775102.1
SIO_010081: ZNHIT2
subclass of: SO_0000673
so part of: ZNHIT2
location: complement(60403..62312)
location: region:60403-62312:-1
so has part: feature:60403-62312:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60403-62312:-1:exon

ZNHIT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: ZNHIT2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger HIT domain-containing protein 2
translation: MAAAGEGEQPPCGLCGAAAAPYTCPRCNRRLCSLGCYRGHGGCAEAFYREQVLQALETERDPPPGRDRLASAFRRLRQLGEXPGDAAGPVGRDLWKSLSPAERAGFQRLLSSGEAATLLPAWRPWWWRRRPVEELGKPQAGEEEEAEDEEAAAAPXPLLPAVVPPLSSLRAPPPSPLLPFQLPNVLFGYAFALSLHGGDETLLPELPAAVLDVSAALRGRRAFASAAEALHAARYEVGAAGYPQCPLGDAGTVLAVVHILEGREGRTDGEDAAVALLHLERLFRKGERRLPKEERRRFGDARRKCRYLLAWSREAPETLAALAEAARVVHAGVAREAAALREEAERGCGGPRRELVSGPVNEGLGERRLIQELD
SIO_010081: ZNHIT2
subclass of: SO_0000673
so part of: ZNHIT2
location: complement(61142..62263)
location: region:61142-62263:-1
so has part: feature:61142-62263:-1:exon

XP_052631062.1
type: Protein
SIO_000068: ncbiprotein

position:61142:-1
position: 61142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62263:-1
position: 62263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61142-62263:-1:exon

FAU
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: FAU
note: FAU ubiquitin like and ribosomal protein S30 fusion; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(62820..65377)
location: region:62820-65377:-1
so has part: feature:62820-65377:-1:exon
subclass of: SO_0000010

128136007
type: Gene
SIO_000068: ncbigene

position:62820:-1
position: 62820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65377:-1
position: 65377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62820-65377:-1:exon

FAU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: FAU
product: FAU ubiquitin like and ribosomal protein S30 fusion
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775103.1
SIO_010081: FAU
subclass of: SO_0000673
so part of: FAU
location: complement(join(62820..62978,63083..63138,63236..63380,63486..63566,65262..65377))
location: region:62820-65377:-1
so has part: feature:65262-65377:-1:exon
so has part: feature:63486-63566:-1:exon
so has part: feature:63236-63380:-1:exon
so has part: feature:63083-63138:-1:exon
so has part: feature:62820-62978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65262-65377:-1:exon

position:65262:-1
position: 65262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63486-63566:-1:exon

position:63486:-1
position: 63486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63566:-1
position: 63566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:63236-63380:-1:exon

position:63236:-1
position: 63236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63380:-1
position: 63380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:63083-63138:-1:exon

position:63083:-1
position: 63083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63138:-1
position: 63138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:62820-62978:-1:exon

position:62978:-1
position: 62978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: FAU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAU ubiquitin-like and ribosomal protein S30
translation: MQLFIRAQSLHTLEVSGTETVAQIKARVAALAGVPPEEQVLLLGGTPLDDDAVLGQSPLPEFATLELSTRLLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPGFGKKKGPNANS
SIO_010081: FAU
subclass of: SO_0000673
so part of: FAU
location: complement(join(62853..62978,63083..63138,63236..63380,63486..63560))
location: region:62853-63560:-1
so has part: feature:63486-63560:-1:exon
so has part: feature:63236-63380:-1:exon
so has part: feature:63083-63138:-1:exon
so has part: feature:62853-62978:-1:exon

XP_052631063.1
type: Protein
SIO_000068: ncbiprotein

position:62853:-1
position: 62853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63560:-1
position: 63560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63486-63560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63236-63380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63083-63138:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:62853-62978:-1:exon

MRPL49
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: MRPL49
note: mitochondrial ribosomal protein L49; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 65388..67387
location: region:65388-67387:1
so has part: feature:65388-67387:1:exon
subclass of: SO_0000010

128136008
type: Gene
SIO_000068: ncbigene

position:65388:1
position: 65388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67387:1
position: 67387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65388-67387:1:exon

MRPL49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: MRPL49
product: mitochondrial ribosomal protein L49
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_052775104.1
SIO_010081: MRPL49
subclass of: SO_0000673
so part of: MRPL49
location: join(65388..65482,65834..65988,66819..66945,67030..67387)
location: region:65388-67387:1
so has part: feature:65388-65482:1:exon
so has part: feature:65834-65988:1:exon
so has part: feature:66819-66945:1:exon
so has part: feature:67030-67387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65388-65482:1:exon

position:65482:1
position: 65482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65834-65988:1:exon

position:65834:1
position: 65834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65988:1
position: 65988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66819-66945:1:exon

position:66819:1
position: 66819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66945:1
position: 66945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:67030-67387:1:exon

position:67030:1
position: 67030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: MRPL49
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 39S ribosomal protein L49, mitochondrial
translation: MAAMAAFGRRLRELGRAVGWRGVQVGGPPPNPPRTPPTVLESTADYAFVERLLPPTRVPXPPPHPTYPTPSGWSPPRGQPPPPALPYFIRRSRLHNLPVYPHLVKGNRRLTELRHVEGDIWALEQELREFLGGLGAKEVEVQVNEVTGSLRLKGHWQRELRDWLLQKGF
SIO_010081: MRPL49
subclass of: SO_0000673
so part of: MRPL49
location: join(65403..65482,65834..65988,66819..66945,67030..67176)
location: region:65403-67176:1
so has part: feature:65403-65482:1:exon
so has part: feature:65834-65988:1:exon
so has part: feature:66819-66945:1:exon
so has part: feature:67030-67176:1:exon

XP_052631064.1
type: Protein
SIO_000068: ncbiprotein

position:65403:1
position: 65403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67176:1
position: 67176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65403-65482:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65834-65988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66819-66945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67030-67176:1:exon

LOC128136004
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128136004
note: pre-mRNA-processing factor 39-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(68560..78948)
location: region:68560-78948:-1
so has part: feature:68560-78948:-1:exon
subclass of: SO_0000010

128136004
type: Gene
SIO_000068: ncbigene

position:68560:-1
position: 68560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78948:-1
position: 78948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68560-78948:-1:exon

LOC128136004
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LOC128136004
product: pre-mRNA-processing factor 39-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775099.1
SIO_010081: LOC128136004
subclass of: SO_0000673
so part of: LOC128136004
location: complement(join(68560..68798,68890..69014,70860..70935,71059..71246,72289..72557,74343..74469,74961..75125,75235..75342,75432..75618,75996..76154,76242..76360,76835..76960,77727..78027,78786..78948))
location: region:68560-78948:-1
so has part: feature:78786-78948:-1:exon
so has part: feature:77727-78027:-1:exon
so has part: feature:76835-76960:-1:exon
so has part: feature:76242-76360:-1:exon
so has part: feature:75996-76154:-1:exon
so has part: feature:75432-75618:-1:exon
so has part: feature:75235-75342:-1:exon
so has part: feature:74961-75125:-1:exon
so has part: feature:74343-74469:-1:exon
so has part: feature:72289-72557:-1:exon
so has part: feature:71059-71246:-1:exon
so has part: feature:70860-70935:-1:exon
so has part: feature:68890-69014:-1:exon
so has part: feature:68560-68798:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78786-78948:-1:exon

position:78786:-1
position: 78786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77727-78027:-1:exon

position:77727:-1
position: 77727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78027:-1
position: 78027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:76835-76960:-1:exon

position:76835:-1
position: 76835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76960:-1
position: 76960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:76242-76360:-1:exon

position:76242:-1
position: 76242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76360:-1
position: 76360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:75996-76154:-1:exon

position:75996:-1
position: 75996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76154:-1
position: 76154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:75432-75618:-1:exon

position:75432:-1
position: 75432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75618:-1
position: 75618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:75235-75342:-1:exon

position:75235:-1
position: 75235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75342:-1
position: 75342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:74961-75125:-1:exon

position:74961:-1
position: 74961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75125:-1
position: 75125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:74343-74469:-1:exon

position:74343:-1
position: 74343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74469:-1
position: 74469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:72289-72557:-1:exon

position:72289:-1
position: 72289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72557:-1
position: 72557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:71059-71246:-1:exon

position:71059:-1
position: 71059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71246:-1
position: 71246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:70860-70935:-1:exon

position:70860:-1
position: 70860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70935:-1
position: 70935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:68890-69014:-1:exon

position:68890:-1
position: 68890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69014:-1
position: 69014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:68560-68798:-1:exon

position:68798:-1
position: 68798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128136004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LOC128136004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-processing factor 39-like
translation: MRADVAARRNGGGGAGGSGQPGPRWGRGSAGGRRGRRQRDPRPCGGAAAPSPQPHRRGAQRRCRPPPPSLRAATVPPPPPLSPRSPPRPLPRNPRPPREPEPPAEEPTLTYPLDFEKFWQAARSNPHDFTAWTELLQYVEQENHLFAARKAFDAFFAHYPYCYGYWKKYADMERRFDCSRETEEVFERGLQSIPLSMDLWIHYISYLQSTLDMNLPESIQKIRGRRVAAAGMDFRSDKLWELYVEWEREQGDLRAVTGIYDRVLSMPTQLYNHHWEKFKEHVLHNPPKDILSPEELLWVQSKLATDPVPKPPEPEGTEAPPGEDLPPGVEGKAAATDAQEDLDQEKIRELVISMRQQIYAQNEAEVSKRWNFEDGIKRPYFHVKPLERAQLRNWRDYLDYEMAAGSHERTIVLFERCVIACALYEEFWIKYTKYLENHTVTGARSVFQRACGYHLPRKPNIHLLWAAFEEKQGNLDEARRILRCFEEVVPGLAMVRLRRVSLERRQGNLEEAEALLLEAMHANEGLPLASFYAVKLARQACKVQKNLGKARKVLVDALEKDPDNARLHANLLEMEFGADVRQNEGNTMSCFERWALRSPLPDEAKLIFSQRRVEFLEDFGSSIHSLLTAYDEHQKILKQHAAAQEGPRKWLGRTRRQTPPPRRSRWPFGSPQLLRVRGGRGIQPLRLQLLVPAARLRRLQLPDAVELQPVLLAELSRGRPNFAPHPLF
SIO_010081: LOC128136004
subclass of: SO_0000673
so part of: LOC128136004
location: complement(join(68687..68798,68890..69014,70860..70935,71059..71246,72289..72557,74343..74469,74961..75125,75235..75342,75432..75618,75996..76154,76242..76360,76835..76960,77727..78027,78786..78910))
location: region:68687-78910:-1
so has part: feature:78786-78910:-1:exon
so has part: feature:77727-78027:-1:exon
so has part: feature:76835-76960:-1:exon
so has part: feature:76242-76360:-1:exon
so has part: feature:75996-76154:-1:exon
so has part: feature:75432-75618:-1:exon
so has part: feature:75235-75342:-1:exon
so has part: feature:74961-75125:-1:exon
so has part: feature:74343-74469:-1:exon
so has part: feature:72289-72557:-1:exon
so has part: feature:71059-71246:-1:exon
so has part: feature:70860-70935:-1:exon
so has part: feature:68890-69014:-1:exon
so has part: feature:68687-68798:-1:exon

XP_052631059.1
type: Protein
SIO_000068: ncbiprotein

position:68687:-1
position: 68687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78910:-1
position: 78910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78786-78910:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77727-78027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76835-76960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76242-76360:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75996-76154:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75432-75618:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75235-75342:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:74961-75125:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:74343-74469:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:72289-72557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:71059-71246:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70860-70935:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:68890-69014:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:68687-68798:-1:exon

SYVN1
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: SYVN1
note: synoviolin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(79311..89300)
location: region:79311-89300:-1
so has part: feature:79311-89300:-1:exon
subclass of: SO_0000010

128135990
type: Gene
SIO_000068: ncbigene

position:79311:-1
position: 79311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89300:-1
position: 89300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79311-89300:-1:exon

SYVN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: SYVN1
product: synoviolin 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775079.1
SIO_010081: SYVN1
subclass of: SO_0000673
so part of: SYVN1
location: complement(join(79311..81268,81626..81762,81910..82096,82171..82284,82377..82514,82851..83002,83192..83308,83688..83753,83843..83942,84768..84894,85009..85112,85765..85813,85896..86048,86527..86619,87129..87274,89135..89300))
location: region:79311-89300:-1
so has part: feature:89135-89300:-1:exon
so has part: feature:87129-87274:-1:exon
so has part: feature:86527-86619:-1:exon
so has part: feature:85896-86048:-1:exon
so has part: feature:85765-85813:-1:exon
so has part: feature:85009-85112:-1:exon
so has part: feature:84768-84894:-1:exon
so has part: feature:83843-83942:-1:exon
so has part: feature:83688-83753:-1:exon
so has part: feature:83192-83308:-1:exon
so has part: feature:82851-83002:-1:exon
so has part: feature:82377-82514:-1:exon
so has part: feature:82171-82284:-1:exon
so has part: feature:81910-82096:-1:exon
so has part: feature:81626-81762:-1:exon
so has part: feature:79311-81268:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89135-89300:-1:exon

position:89135:-1
position: 89135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87129-87274:-1:exon

position:87129:-1
position: 87129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87274:-1
position: 87274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:86527-86619:-1:exon

position:86527:-1
position: 86527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86619:-1
position: 86619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:85896-86048:-1:exon

position:85896:-1
position: 85896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86048:-1
position: 86048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:85765-85813:-1:exon

position:85765:-1
position: 85765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85813:-1
position: 85813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:85009-85112:-1:exon

position:85009:-1
position: 85009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85112:-1
position: 85112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:84768-84894:-1:exon

position:84768:-1
position: 84768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84894:-1
position: 84894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:83843-83942:-1:exon

position:83843:-1
position: 83843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83942:-1
position: 83942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:83688-83753:-1:exon

position:83688:-1
position: 83688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83753:-1
position: 83753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:83192-83308:-1:exon

position:83192:-1
position: 83192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83308:-1
position: 83308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:82851-83002:-1:exon

position:82851:-1
position: 82851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83002:-1
position: 83002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:82377-82514:-1:exon

position:82377:-1
position: 82377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82514:-1
position: 82514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:82171-82284:-1:exon

position:82171:-1
position: 82171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82284:-1
position: 82284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:81910-82096:-1:exon

position:81910:-1
position: 81910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82096:-1
position: 82096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:81626-81762:-1:exon

position:81626:-1
position: 81626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81762:-1
position: 81762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:79311-81268:-1:exon

position:81268:-1
position: 81268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYVN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: SYVN1
product: synoviolin 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775078.1
SIO_010081: SYVN1
subclass of: SO_0000673
so part of: SYVN1
location: complement(join(79311..81268,81626..81762,81910..82096,82171..82284,82377..82514,82851..83002,83192..83308,83688..83753,83843..83942,84768..84894,85009..85112,85765..85813,85896..86048,86527..86619,87129..87274,88475..88534))
location: region:79311-88534:-1
so has part: feature:88475-88534:-1:exon
so has part: feature:87129-87274:-1:exon
so has part: feature:86527-86619:-1:exon
so has part: feature:85896-86048:-1:exon
so has part: feature:85765-85813:-1:exon
so has part: feature:85009-85112:-1:exon
so has part: feature:84768-84894:-1:exon
so has part: feature:83843-83942:-1:exon
so has part: feature:83688-83753:-1:exon
so has part: feature:83192-83308:-1:exon
so has part: feature:82851-83002:-1:exon
so has part: feature:82377-82514:-1:exon
so has part: feature:82171-82284:-1:exon
so has part: feature:81910-82096:-1:exon
so has part: feature:81626-81762:-1:exon
so has part: feature:79311-81268:-1:exon

position:88534:-1
position: 88534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88475-88534:-1:exon

position:88475:-1
position: 88475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87129-87274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86527-86619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85896-86048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85765-85813:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85009-85112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84768-84894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83843-83942:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83688-83753:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83192-83308:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:82851-83002:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82377-82514:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82171-82284:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81910-82096:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81626-81762:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:79311-81268:-1:exon

SYVN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: SYVN1
product: synoviolin 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775082.1
SIO_010081: SYVN1
subclass of: SO_0000673
so part of: SYVN1
location: complement(join(79311..81268,81626..81762,81910..82096,82171..82284,82377..82514,82851..83002,83192..83308,83688..83753,83843..83942,84768..84894,85009..85112,85765..85813,85896..86048,86527..86619,87129..87274,88471..88487))
location: region:79311-88487:-1
so has part: feature:88471-88487:-1:exon
so has part: feature:87129-87274:-1:exon
so has part: feature:86527-86619:-1:exon
so has part: feature:85896-86048:-1:exon
so has part: feature:85765-85813:-1:exon
so has part: feature:85009-85112:-1:exon
so has part: feature:84768-84894:-1:exon
so has part: feature:83843-83942:-1:exon
so has part: feature:83688-83753:-1:exon
so has part: feature:83192-83308:-1:exon
so has part: feature:82851-83002:-1:exon
so has part: feature:82377-82514:-1:exon
so has part: feature:82171-82284:-1:exon
so has part: feature:81910-82096:-1:exon
so has part: feature:81626-81762:-1:exon
so has part: feature:79311-81268:-1:exon

position:88487:-1
position: 88487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88471-88487:-1:exon

position:88471:-1
position: 88471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87129-87274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86527-86619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85896-86048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85765-85813:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85009-85112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84768-84894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83843-83942:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83688-83753:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83192-83308:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:82851-83002:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82377-82514:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82171-82284:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81910-82096:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81626-81762:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:79311-81268:-1:exon

SYVN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: SYVN1
product: synoviolin 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775080.1
SIO_010081: SYVN1
subclass of: SO_0000673
so part of: SYVN1
location: complement(join(79311..81268,81626..81762,81910..82096,82171..82284,82377..82514,82851..83002,83192..83308,83688..83753,83843..83942,84768..84894,85009..85112,85765..85813,85896..86048,86527..86619,87129..87274,87378..87562))
location: region:79311-87562:-1
so has part: feature:87378-87562:-1:exon
so has part: feature:87129-87274:-1:exon
so has part: feature:86527-86619:-1:exon
so has part: feature:85896-86048:-1:exon
so has part: feature:85765-85813:-1:exon
so has part: feature:85009-85112:-1:exon
so has part: feature:84768-84894:-1:exon
so has part: feature:83843-83942:-1:exon
so has part: feature:83688-83753:-1:exon
so has part: feature:83192-83308:-1:exon
so has part: feature:82851-83002:-1:exon
so has part: feature:82377-82514:-1:exon
so has part: feature:82171-82284:-1:exon
so has part: feature:81910-82096:-1:exon
so has part: feature:81626-81762:-1:exon
so has part: feature:79311-81268:-1:exon

position:87562:-1
position: 87562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87378-87562:-1:exon

position:87378:-1
position: 87378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87129-87274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86527-86619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85896-86048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85765-85813:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85009-85112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84768-84894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83843-83942:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83688-83753:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83192-83308:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:82851-83002:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82377-82514:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82171-82284:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81910-82096:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81626-81762:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:79311-81268:-1:exon

SYVN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: SYVN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase synoviolin
translation: MLCTAVVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVNHAYHSILTRGASVQLVFGFEYAILMTMVLTIFIKYVLHSIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQPPPEPPEQAPPPPQTPQVPQPPNFPQGILPPFPPGMFPFWPPVGPFPPVPGVQPPNSADNTAPSSSTASAARPGDSANAGSEAAAAGTVPGLPLPPPWMGMPWPPLFGFPPMPVPPAGFAGLTEEELRAMEGHDRQNLEARLQCLQNIHTLLDAAMVQINQYLTVLATIGAPRPVASRPLSTRETPTEEPTPLRSPGSPSASATAAGSAGTAAAADPTAPAGAEGFTAEEEEEEEDGGEGSSSLDEPDTAELRRRRLQKLASPPAASH
SIO_010081: SYVN1
subclass of: SO_0000673
so part of: SYVN1
location: complement(join(81108..81268,81626..81762,81910..82096,82171..82284,82377..82514,82851..83002,83192..83308,83688..83753,83843..83942,84768..84894,85009..85112,85765..85813,85896..86048,86527..86619,87129..87260))
location: region:81108-87260:-1
so has part: feature:87129-87260:-1:exon
so has part: feature:86527-86619:-1:exon
so has part: feature:85896-86048:-1:exon
so has part: feature:85765-85813:-1:exon
so has part: feature:85009-85112:-1:exon
so has part: feature:84768-84894:-1:exon
so has part: feature:83843-83942:-1:exon
so has part: feature:83688-83753:-1:exon
so has part: feature:83192-83308:-1:exon
so has part: feature:82851-83002:-1:exon
so has part: feature:82377-82514:-1:exon
so has part: feature:82171-82284:-1:exon
so has part: feature:81910-82096:-1:exon
so has part: feature:81626-81762:-1:exon
so has part: feature:81108-81268:-1:exon

XP_052631038.1
type: Protein
SIO_000068: ncbiprotein

position:81108:-1
position: 81108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87260:-1
position: 87260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87129-87260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86527-86619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85896-86048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85765-85813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85009-85112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84768-84894:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83843-83942:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83688-83753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83192-83308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82851-83002:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:82377-82514:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82171-82284:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:81910-82096:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81626-81762:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81108-81268:-1:exon

SYVN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: SYVN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase synoviolin
translation: MLCTAVVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVNHAYHSILTRGASVQLVFGFEYAILMTMVLTIFIKYVLHSIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQPPPEPPEQAPPPPQTPQVPQPPNFPQGILPPFPPGMFPFWPPVGPFPPVPGVQPPNSADNTAPSSSTASAARPGDSANAGSEAAAAGTVPGLPLPPPWMGMPWPPLFGFPPMPVPPAGFAGLTEEELRAMEGHDRQNLEARLQCLQNIHTLLDAAMVQINQYLTVLATIGAPRPVASRPLSTRETPTEEPTPLRSPGSPSASATAAGSAGTAAAADPTAPAGAEGFTAEEEEEEEDGGEGSSSLDEPDTAELRRRRLQKLASPPAASH
SIO_010081: SYVN1
subclass of: SO_0000673
so part of: SYVN1
location: complement(join(81108..81268,81626..81762,81910..82096,82171..82284,82377..82514,82851..83002,83192..83308,83688..83753,83843..83942,84768..84894,85009..85112,85765..85813,85896..86048,86527..86619,87129..87260))
location: region:81108-87260:-1
so has part: feature:87129-87260:-1:exon
so has part: feature:86527-86619:-1:exon
so has part: feature:85896-86048:-1:exon
so has part: feature:85765-85813:-1:exon
so has part: feature:85009-85112:-1:exon
so has part: feature:84768-84894:-1:exon
so has part: feature:83843-83942:-1:exon
so has part: feature:83688-83753:-1:exon
so has part: feature:83192-83308:-1:exon
so has part: feature:82851-83002:-1:exon
so has part: feature:82377-82514:-1:exon
so has part: feature:82171-82284:-1:exon
so has part: feature:81910-82096:-1:exon
so has part: feature:81626-81762:-1:exon
so has part: feature:81108-81268:-1:exon

XP_052631039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87129-87260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86527-86619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85896-86048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85765-85813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85009-85112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84768-84894:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83843-83942:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83688-83753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83192-83308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82851-83002:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:82377-82514:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82171-82284:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:81910-82096:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81626-81762:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81108-81268:-1:exon

SYVN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: SYVN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase synoviolin
translation: MLCTAVVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVNHAYHSILTRGASVQLVFGFEYAILMTMVLTIFIKYVLHSIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQPPPEPPEQAPPPPQTPQVPQPPNFPQGILPPFPPGMFPFWPPVGPFPPVPGVQPPNSADNTAPSSSTASAARPGDSANAGSEAAAAGTVPGLPLPPPWMGMPWPPLFGFPPMPVPPAGFAGLTEEELRAMEGHDRQNLEARLQCLQNIHTLLDAAMVQINQYLTVLATIGAPRPVASRPLSTRETPTEEPTPLRSPGSPSASATAAGSAGTAAAADPTAPAGAEGFTAEEEEEEEDGGEGSSSLDEPDTAELRRRRLQKLASPPAASH
SIO_010081: SYVN1
subclass of: SO_0000673
so part of: SYVN1
location: complement(join(81108..81268,81626..81762,81910..82096,82171..82284,82377..82514,82851..83002,83192..83308,83688..83753,83843..83942,84768..84894,85009..85112,85765..85813,85896..86048,86527..86619,87129..87260))
location: region:81108-87260:-1
so has part: feature:87129-87260:-1:exon
so has part: feature:86527-86619:-1:exon
so has part: feature:85896-86048:-1:exon
so has part: feature:85765-85813:-1:exon
so has part: feature:85009-85112:-1:exon
so has part: feature:84768-84894:-1:exon
so has part: feature:83843-83942:-1:exon
so has part: feature:83688-83753:-1:exon
so has part: feature:83192-83308:-1:exon
so has part: feature:82851-83002:-1:exon
so has part: feature:82377-82514:-1:exon
so has part: feature:82171-82284:-1:exon
so has part: feature:81910-82096:-1:exon
so has part: feature:81626-81762:-1:exon
so has part: feature:81108-81268:-1:exon

XP_052631040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87129-87260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86527-86619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85896-86048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85765-85813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85009-85112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84768-84894:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83843-83942:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83688-83753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83192-83308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82851-83002:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:82377-82514:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82171-82284:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:81910-82096:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81626-81762:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81108-81268:-1:exon

SYVN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: SYVN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase synoviolin
translation: MLCTAVVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVNHAYHSILTRGASVQLVFGFEYAILMTMVLTIFIKYVLHSIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQPPPEPPEQAPPPPQTPQVPQPPNFPQGILPPFPPGMFPFWPPVGPFPPVPGVQPPNSADNTAPSSSTASAARPGDSANAGSEAAAAGTVPGLPLPPPWMGMPWPPLFGFPPMPVPPAGFAGLTEEELRAMEGHDRQNLEARLQCLQNIHTLLDAAMVQINQYLTVLATIGAPRPVASRPLSTRETPTEEPTPLRSPGSPSASATAAGSAGTAAAADPTAPAGAEGFTAEEEEEEEDGGEGSSSLDEPDTAELRRRRLQKLASPPAASH
SIO_010081: SYVN1
subclass of: SO_0000673
so part of: SYVN1
location: complement(join(81108..81268,81626..81762,81910..82096,82171..82284,82377..82514,82851..83002,83192..83308,83688..83753,83843..83942,84768..84894,85009..85112,85765..85813,85896..86048,86527..86619,87129..87260))
location: region:81108-87260:-1
so has part: feature:87129-87260:-1:exon
so has part: feature:86527-86619:-1:exon
so has part: feature:85896-86048:-1:exon
so has part: feature:85765-85813:-1:exon
so has part: feature:85009-85112:-1:exon
so has part: feature:84768-84894:-1:exon
so has part: feature:83843-83942:-1:exon
so has part: feature:83688-83753:-1:exon
so has part: feature:83192-83308:-1:exon
so has part: feature:82851-83002:-1:exon
so has part: feature:82377-82514:-1:exon
so has part: feature:82171-82284:-1:exon
so has part: feature:81910-82096:-1:exon
so has part: feature:81626-81762:-1:exon
so has part: feature:81108-81268:-1:exon

XP_052631042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87129-87260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86527-86619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85896-86048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85765-85813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85009-85112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84768-84894:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83843-83942:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83688-83753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83192-83308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82851-83002:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:82377-82514:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82171-82284:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:81910-82096:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81626-81762:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81108-81268:-1:exon

LOC128135992
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128135992
note: uncharacterized LOC128135992; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 85823..89383
location: region:85823-89383:1
so has part: feature:85823-89383:1:exon
subclass of: SO_0000011

128135992
type: Gene
SIO_000068: ncbigene

position:85823:1
position: 85823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89383:1
position: 89383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85823-89383:1:exon

LOC128135992
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 202280
nc RNA class: lncRNA
gene: LOC128135992
product: uncharacterized LOC128135992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008233240.1
SIO_010081: LOC128135992
subclass of: SO_0000673
so part of: LOC128135992
location: join(85823..86041,87384..87495,89296..89383)
location: region:85823-89383:1
so has part: feature:85823-86041:1:exon
so has part: feature:87384-87495:1:exon
so has part: feature:89296-89383:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85823-86041:1:exon

position:86041:1
position: 86041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87384-87495:1:exon

position:87384:1
position: 87384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87495:1
position: 87495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:89296-89383:1:exon

position:89296:1
position: 89296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPDYC
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: SPDYC
note: speedy/RINGO cell cycle regulator family member C; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 90857..92971
location: region:90857-92971:1
so has part: feature:90857-92971:1:exon
subclass of: SO_0000010

128135996
type: Gene
SIO_000068: ncbigene

position:90857:1
position: 90857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92971:1
position: 92971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90857-92971:1:exon

SPDYC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: SPDYC
product: speedy/RINGO cell cycle regulator family member C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_052775091.1
SIO_010081: SPDYC
subclass of: SO_0000673
so part of: SPDYC
location: join(90857..91016,91158..91216,91327..91412,91695..91866,92696..92971)
location: region:90857-92971:1
so has part: feature:90857-91016:1:exon
so has part: feature:91158-91216:1:exon
so has part: feature:91327-91412:1:exon
so has part: feature:91695-91866:1:exon
so has part: feature:92696-92971:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90857-91016:1:exon

position:91016:1
position: 91016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:91158-91216:1:exon

position:91158:1
position: 91158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91216:1
position: 91216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91327-91412:1:exon

position:91327:1
position: 91327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91412:1
position: 91412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91695-91866:1:exon

position:91695:1
position: 91695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91866:1
position: 91866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:92696-92971:1:exon

position:92696:1
position: 92696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPDYC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: SPDYC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: speedy protein C
translation: MKPPPSPAPPGGERHPPSSTQIWEAGRQPPNPTSISKSFQLHRQEREAFFSLLEDNVVKEFLSMDVCCRISDKYLLAMALTYFKRAGLPTSEYTRLNLFTALYLANDMEEDEEEHKYQIFPWALGRRWRQLFPRFLRRRDRLWARMSYRAAVSRHCCEEVMAAEPSHWAWLRERPPPPQRGHPALQRGPPPPPHLPALRLPPCPRPGGGGGGRWSRPGQGRLHPAAAPPPEYGPALRLPQNALNRPQNAG
SIO_010081: SPDYC
subclass of: SO_0000673
so part of: SPDYC
location: join(90857..91016,91158..91216,91327..91412,91695..91866,92696..92971)
location: region:90857-92971:1
so has part: feature:90857-91016:1:exon
so has part: feature:91158-91216:1:exon
so has part: feature:91327-91412:1:exon
so has part: feature:91695-91866:1:exon
so has part: feature:92696-92971:1:exon

XP_052631051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90857-91016:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91158-91216:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91327-91412:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91695-91866:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92696-92971:1:exon

CAPN1
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: CAPN1
note: calpain 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 94326..102193
location: region:94326-102193:1
so has part: feature:94326-102193:1:exon
subclass of: SO_0000010

128135991
type: Gene
SIO_000068: ncbigene

position:94326:1
position: 94326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102193:1
position: 102193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94326-102193:1:exon

CAPN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: CAPN1
product: calpain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
transcript id: XM_052775083.1
SIO_010081: CAPN1
subclass of: SO_0000673
so part of: CAPN1
location: join(94326..94786,95191..95334,96813..97080,97287..97356,97631..97749,98071..98204,98285..98453,98567..98650,98723..98808,98888..98962,99065..99225,99322..99500,99583..99594,99713..99924,99999..100038,100113..100179,100265..100345,100460..100524,100638..100706,100821..100899,101041..101157,101981..102039,102122..102193)
location: region:94326-102193:1
so has part: feature:94326-94786:1:exon
so has part: feature:95191-95334:1:exon
so has part: feature:96813-97080:1:exon
so has part: feature:97287-97356:1:exon
so has part: feature:97631-97749:1:exon
so has part: feature:98071-98204:1:exon
so has part: feature:98285-98453:1:exon
so has part: feature:98567-98650:1:exon
so has part: feature:98723-98808:1:exon
so has part: feature:98888-98962:1:exon
so has part: feature:99065-99225:1:exon
so has part: feature:99322-99500:1:exon
so has part: feature:99583-99594:1:exon
so has part: feature:99713-99924:1:exon
so has part: feature:99999-100038:1:exon
so has part: feature:100113-100179:1:exon
so has part: feature:100265-100345:1:exon
so has part: feature:100460-100524:1:exon
so has part: feature:100638-100706:1:exon
so has part: feature:100821-100899:1:exon
so has part: feature:101041-101157:1:exon
so has part: feature:101981-102039:1:exon
so has part: feature:102122-102193:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94326-94786:1:exon

position:94786:1
position: 94786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95191-95334:1:exon

position:95191:1
position: 95191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95334:1
position: 95334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:96813-97080:1:exon

position:96813:1
position: 96813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97080:1
position: 97080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:97287-97356:1:exon

position:97287:1
position: 97287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97356:1
position: 97356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:97631-97749:1:exon

position:97631:1
position: 97631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97749:1
position: 97749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:98071-98204:1:exon

position:98071:1
position: 98071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98204:1
position: 98204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:98285-98453:1:exon

position:98285:1
position: 98285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98453:1
position: 98453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:98567-98650:1:exon

position:98567:1
position: 98567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98650:1
position: 98650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:98723-98808:1:exon

position:98723:1
position: 98723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98808:1
position: 98808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:98888-98962:1:exon

position:98888:1
position: 98888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98962:1
position: 98962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:99065-99225:1:exon

position:99065:1
position: 99065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99225:1
position: 99225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:99322-99500:1:exon

position:99322:1
position: 99322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99500:1
position: 99500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:99583-99594:1:exon

position:99583:1
position: 99583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99594:1
position: 99594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:99713-99924:1:exon

position:99713:1
position: 99713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99924:1
position: 99924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:99999-100038:1:exon

position:99999:1
position: 99999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100038:1
position: 100038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:100113-100179:1:exon

position:100113:1
position: 100113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100179:1
position: 100179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:100265-100345:1:exon

position:100265:1
position: 100265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100345:1
position: 100345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:100460-100524:1:exon

position:100460:1
position: 100460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100524:1
position: 100524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:100638-100706:1:exon

position:100638:1
position: 100638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100706:1
position: 100706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:100821-100899:1:exon

position:100821:1
position: 100821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100899:1
position: 100899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:101041-101157:1:exon

position:101041:1
position: 101041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101157:1
position: 101157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:101981-102039:1:exon

position:101981:1
position: 101981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102039:1
position: 102039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:102122-102193:1:exon

position:102122:1
position: 102122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CAPN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: CAPN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calpain-1 catalytic subunit
translation: MAEEPIVPVYCTGVSAQVQRQRAKALGLGRHENAVRYLGQDYGRLVEECRRSGTLFRDETFPPAPASLGFRELGPSSSKTYGVQWKRPTELCPRPQFIVDGATRTDICQGALGDCWLLAAIASLTLNDTILHRVVPHGQSFQHGYAGIFHFQIWQFGEWLDVVVDDYLPTKDGKLLFVHSAEGSEFWSALLEKAYAKVNGCYEALSGGSTSEGFEDFTGGVTEWYDLRKPPGDLYQIILKALDRGSLLGCSIDITSVFDMEAVTFKKLVKGHAYSVTGAKQINYRGQSLGLIRMRNPWGEVEWTGPWSDNSSEWNAVEPSLRQQLMVKMEDGEFWMSFRDFLREFTRLEICNLTPDALQSRKFRKWNTRLYDGTWRRGSTAGGCRNYPATFWINPQFKIQLEEVDDERDEDGGREPGCSFLLALMQKHRRRERRYGKDMETIGFAVYEVPPEYVGKSGVHLKRDFFLANASRARSEQFINLREVSTRFRLPPGEYIVVPSTFEPNKEGDFVLRVFSEKKAGTEEMDDKIQATLPDEKVLSESQIDDNFKQLFKQLAGGEHPVFSPQDMEISVTELQTILNRIISKHKDLRTKGFSTESCRSMVNLMDKDGNGKLGLVEFNVLWNRIRNYLAIFRKFDLDKSGSMSAYEMRMALEAAGYKLNKKLHELIITRYAEPDLAIDFDNFVCCLVRLETMFRFFQAVDVDQDGVVTFDLLQWLQLTMFA
SIO_010081: CAPN1
subclass of: SO_0000673
so part of: CAPN1
location: join(96814..97080,97287..97356,97631..97749,98071..98204,98285..98453,98567..98650,98723..98808,98888..98962,99065..99225,99322..99500,99583..99594,99713..99924,99999..100038,100113..100179,100265..100345,100460..100524,100638..100706,100821..100899,101041..101157,101981..102039,102122..102148)
location: region:96814-102148:1
so has part: feature:96814-97080:1:exon
so has part: feature:97287-97356:1:exon
so has part: feature:97631-97749:1:exon
so has part: feature:98071-98204:1:exon
so has part: feature:98285-98453:1:exon
so has part: feature:98567-98650:1:exon
so has part: feature:98723-98808:1:exon
so has part: feature:98888-98962:1:exon
so has part: feature:99065-99225:1:exon
so has part: feature:99322-99500:1:exon
so has part: feature:99583-99594:1:exon
so has part: feature:99713-99924:1:exon
so has part: feature:99999-100038:1:exon
so has part: feature:100113-100179:1:exon
so has part: feature:100265-100345:1:exon
so has part: feature:100460-100524:1:exon
so has part: feature:100638-100706:1:exon
so has part: feature:100821-100899:1:exon
so has part: feature:101041-101157:1:exon
so has part: feature:101981-102039:1:exon
so has part: feature:102122-102148:1:exon

XP_052631043.1
type: Protein
SIO_000068: ncbiprotein

position:96814:1
position: 96814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102148:1
position: 102148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96814-97080:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97287-97356:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97631-97749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98071-98204:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98285-98453:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98567-98650:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:98723-98808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98888-98962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:99065-99225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:99322-99500:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:99583-99594:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:99713-99924:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:99999-100038:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:100113-100179:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100265-100345:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100460-100524:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:100638-100706:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:100821-100899:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:101041-101157:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:101981-102039:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:102122-102148:1:exon

POLA2
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: POLA2
note: DNA polymerase alpha 2, accessory subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 102530..113413
location: region:102530-113413:1
so has part: feature:102530-113413:1:exon
subclass of: SO_0000010

128135988
type: Gene
SIO_000068: ncbigene

position:102530:1
position: 102530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113413:1
position: 113413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102530-113413:1:exon

POLA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: POLA2
product: DNA polymerase alpha 2, accessory subunit, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775075.1
SIO_010081: POLA2
subclass of: SO_0000673
so part of: POLA2
location: join(102530..102728,105019..105146,105241..105326,105549..105603,105707..105813,105905..106098,106203..106291,106412..106567,106667..106729,106819..106861,107010..107128,107662..107700,107961..108034,109092..109200,110598..110704,111024..111083,111483..111609,111850..113413)
location: region:102530-113413:1
so has part: feature:102530-102728:1:exon
so has part: feature:105019-105146:1:exon
so has part: feature:105241-105326:1:exon
so has part: feature:105549-105603:1:exon
so has part: feature:105707-105813:1:exon
so has part: feature:105905-106098:1:exon
so has part: feature:106203-106291:1:exon
so has part: feature:106412-106567:1:exon
so has part: feature:106667-106729:1:exon
so has part: feature:106819-106861:1:exon
so has part: feature:107010-107128:1:exon
so has part: feature:107662-107700:1:exon
so has part: feature:107961-108034:1:exon
so has part: feature:109092-109200:1:exon
so has part: feature:110598-110704:1:exon
so has part: feature:111024-111083:1:exon
so has part: feature:111483-111609:1:exon
so has part: feature:111850-113413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102530-102728:1:exon

position:102728:1
position: 102728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:105019-105146:1:exon

position:105019:1
position: 105019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105146:1
position: 105146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:105241-105326:1:exon

position:105241:1
position: 105241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105326:1
position: 105326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:105549-105603:1:exon

position:105549:1
position: 105549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105603:1
position: 105603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:105707-105813:1:exon

position:105707:1
position: 105707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105813:1
position: 105813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:105905-106098:1:exon

position:105905:1
position: 105905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106098:1
position: 106098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:106203-106291:1:exon

position:106203:1
position: 106203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106291:1
position: 106291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:106412-106567:1:exon

position:106412:1
position: 106412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106567:1
position: 106567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:106667-106729:1:exon

position:106667:1
position: 106667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106729:1
position: 106729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:106819-106861:1:exon

position:106819:1
position: 106819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106861:1
position: 106861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:107010-107128:1:exon

position:107010:1
position: 107010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107128:1
position: 107128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:107662-107700:1:exon

position:107662:1
position: 107662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107700:1
position: 107700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:107961-108034:1:exon

position:107961:1
position: 107961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108034:1
position: 108034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:109092-109200:1:exon

position:109092:1
position: 109092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109200:1
position: 109200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:110598-110704:1:exon

position:110598:1
position: 110598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110704:1
position: 110704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:111024-111083:1:exon

position:111024:1
position: 111024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111083:1
position: 111083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:111483-111609:1:exon

position:111483:1
position: 111483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111609:1
position: 111609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:111850-113413:1:exon

position:111850:1
position: 111850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POLA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: POLA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase alpha subunit B isoform X1
translation: MVVFLSCKLKIKKKTQNPRNIINIKALFLLVLSPPSSFASGRIPPAPLDPPGAEERCRLTQCLYLSVVELCLTHELDPEALANELLAFVTSKNLGTQLSTDGLDAFEHEVLTKRSSRYHQKRDNRYGGLHDIYSLQELLDEEEDDELLDTYTTPSKGSQKRSNSTPENPRPKRTLSSRSPYVLFSPNTFSPSVTPSQKYTARSSRGEVVALFGSVQGPSWSGRGGRSCTPKLFGSPEENLTKSYKFMFQKALDVREVLSWRIEELGDVLKSHHHLEDFASVLLPAQEPVTVLGQIGCDSNGKLNAKSVVLEGDREHSSGRQVPLDLSELKEYSLFPGQIVALEGTNSTGRKMVVSKLYEGVPLPFHTPPEPAPEQRMVLVACGPYTTSDSIAYDPLADLVEVIVRDRPDVCILFGPFLDAKHEQVENCQLLGSFAEVFKLCLKTIIEGTRSAGSQLVFVPSLRDVHHDYIYPQPPFLYPELPKDDKPRVHFVSDPCTLDVDGVVFGLTSTDLLFHMGAEEISSSSGISDRFTRILKHILTQRSYYPLYPPSEELNVDYETFYSYASLPVTPDVLITPSELRYFVKDVLGCVCINPGRLTKGQVGGTYARLYIQREDATGERKSPCVAAQVVKI
SIO_010081: POLA2
subclass of: SO_0000673
so part of: POLA2
location: join(102530..102728,105019..105146,105241..105326,105549..105603,105707..105813,105905..106098,106203..106291,106412..106567,106667..106729,106819..106861,107010..107128,107662..107700,107961..108034,109092..109200,110598..110704,111024..111083,111483..111609,111850..111996)
location: region:102530-111996:1
so has part: feature:102530-102728:1:exon
so has part: feature:105019-105146:1:exon
so has part: feature:105241-105326:1:exon
so has part: feature:105549-105603:1:exon
so has part: feature:105707-105813:1:exon
so has part: feature:105905-106098:1:exon
so has part: feature:106203-106291:1:exon
so has part: feature:106412-106567:1:exon
so has part: feature:106667-106729:1:exon
so has part: feature:106819-106861:1:exon
so has part: feature:107010-107128:1:exon
so has part: feature:107662-107700:1:exon
so has part: feature:107961-108034:1:exon
so has part: feature:109092-109200:1:exon
so has part: feature:110598-110704:1:exon
so has part: feature:111024-111083:1:exon
so has part: feature:111483-111609:1:exon
so has part: feature:111850-111996:1:exon

XP_052631035.1
type: Protein
SIO_000068: ncbiprotein

position:111996:1
position: 111996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102530-102728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105019-105146:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105241-105326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105549-105603:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:105707-105813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105905-106098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:106203-106291:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106412-106567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106667-106729:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106819-106861:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107010-107128:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107662-107700:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107961-108034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:109092-109200:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:110598-110704:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:111024-111083:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:111483-111609:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:111850-111996:1:exon

POLA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: POLA2
product: DNA polymerase alpha 2, accessory subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_052775077.1
SIO_010081: POLA2
subclass of: SO_0000673
so part of: POLA2
location: join(102530..102728,105019..105146,105241..105326,105549..105603,105707..105813,105905..106098,106203..106291,106412..106567,106667..106729,106819..106861,107010..107128,107662..107700,107961..108034,109092..109200,110598..110704,111007..111083,111483..111609)
location: region:102530-111609:1
so has part: feature:102530-102728:1:exon
so has part: feature:105019-105146:1:exon
so has part: feature:105241-105326:1:exon
so has part: feature:105549-105603:1:exon
so has part: feature:105707-105813:1:exon
so has part: feature:105905-106098:1:exon
so has part: feature:106203-106291:1:exon
so has part: feature:106412-106567:1:exon
so has part: feature:106667-106729:1:exon
so has part: feature:106819-106861:1:exon
so has part: feature:107010-107128:1:exon
so has part: feature:107662-107700:1:exon
so has part: feature:107961-108034:1:exon
so has part: feature:109092-109200:1:exon
so has part: feature:110598-110704:1:exon
so has part: feature:111007-111083:1:exon
so has part: feature:111483-111609:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102530-102728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105019-105146:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105241-105326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105549-105603:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:105707-105813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105905-106098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:106203-106291:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106412-106567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106667-106729:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106819-106861:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107010-107128:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107662-107700:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107961-108034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:109092-109200:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:110598-110704:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:111007-111083:1:exon

position:111007:1
position: 111007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:111483-111609:1:exon

POLA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: POLA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase alpha subunit B isoform X3
translation: MVVFLSCKLKIKKKTQNPRNIINIKALFLLVLSPPSSFASGRIPPAPLDPPGAEERCRLTQCLYLSVVELCLTHELDPEALANELLAFVTSKNLGTQLSTDGLDAFEHEVLTKRSSRYHQKRDNRYGGLHDIYSLQELLDEEEDDELLDTYTTPSKGSQKRSNSTPENPRPKRTLSSRSPYVLFSPNTFSPSVTPSQKYTARSSRGEVVALFGSVQGPSWSGRGGRSCTPKLFGSPEENLTKSYKFMFQKALDVREVLSWRIEELGDVLKSHHHLEDFASVLLPAQEPVTVLGQIGCDSNGKLNAKSVVLEGDREHSSGRQVPLDLSELKEYSLFPGQIVALEGTNSTGRKMVVSKLYEGVPLPFHTPPEPAPEQRMVLVACGPYTTSDSIAYDPLADLVEVIVRDRPDVCILFGPFLDAKHEQVENCQLLGSFAEVFKLCLKTIIEGTRSAGSQLVFVPSLRDVHHDYIYPQPPFLYPELPKDDKPRVHFVSDPCTLDVDGVVFGLTSTDLLFHMGAEEISSSFSLAAHPESRTGSRESSSTS
SIO_010081: POLA2
subclass of: SO_0000673
so part of: POLA2
location: join(102530..102728,105019..105146,105241..105326,105549..105603,105707..105813,105905..106098,106203..106291,106412..106567,106667..106729,106819..106861,107010..107128,107662..107700,107961..108034,109092..109200,110598..110704,111007..111073)
location: region:102530-111073:1
so has part: feature:102530-102728:1:exon
so has part: feature:105019-105146:1:exon
so has part: feature:105241-105326:1:exon
so has part: feature:105549-105603:1:exon
so has part: feature:105707-105813:1:exon
so has part: feature:105905-106098:1:exon
so has part: feature:106203-106291:1:exon
so has part: feature:106412-106567:1:exon
so has part: feature:106667-106729:1:exon
so has part: feature:106819-106861:1:exon
so has part: feature:107010-107128:1:exon
so has part: feature:107662-107700:1:exon
so has part: feature:107961-108034:1:exon
so has part: feature:109092-109200:1:exon
so has part: feature:110598-110704:1:exon
so has part: feature:111007-111073:1:exon

XP_052631037.1
type: Protein
SIO_000068: ncbiprotein

position:111073:1
position: 111073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102530-102728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105019-105146:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105241-105326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105549-105603:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:105707-105813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105905-106098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:106203-106291:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106412-106567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106667-106729:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106819-106861:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107010-107128:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107662-107700:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107961-108034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:109092-109200:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:110598-110704:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:111007-111073:1:exon

POLA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: POLA2
product: DNA polymerase alpha 2, accessory subunit, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775076.1
SIO_010081: POLA2
subclass of: SO_0000673
so part of: POLA2
location: join(103522..103905,105019..105146,105241..105326,105549..105603,105707..105813,105905..106098,106203..106291,106412..106567,106667..106729,106819..106861,107010..107128,107662..107700,107961..108034,109092..109200,110598..110704,111024..111083,111483..111609,111850..113413)
location: region:103522-113413:1
so has part: feature:103522-103905:1:exon
so has part: feature:105019-105146:1:exon
so has part: feature:105241-105326:1:exon
so has part: feature:105549-105603:1:exon
so has part: feature:105707-105813:1:exon
so has part: feature:105905-106098:1:exon
so has part: feature:106203-106291:1:exon
so has part: feature:106412-106567:1:exon
so has part: feature:106667-106729:1:exon
so has part: feature:106819-106861:1:exon
so has part: feature:107010-107128:1:exon
so has part: feature:107662-107700:1:exon
so has part: feature:107961-108034:1:exon
so has part: feature:109092-109200:1:exon
so has part: feature:110598-110704:1:exon
so has part: feature:111024-111083:1:exon
so has part: feature:111483-111609:1:exon
so has part: feature:111850-113413:1:exon

position:103522:1
position: 103522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103522-103905:1:exon

position:103905:1
position: 103905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:105019-105146:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105241-105326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105549-105603:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:105707-105813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105905-106098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:106203-106291:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106412-106567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106667-106729:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106819-106861:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107010-107128:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107662-107700:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107961-108034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:109092-109200:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:110598-110704:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:111024-111083:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:111483-111609:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:111850-113413:1:exon

POLA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: POLA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase alpha subunit B isoform X2
translation: MAEPVSAEAVLRELGLFELRCQGEDVPARLVELCLTHELDPEALANELLAFVTSKNLGTQLSTDGLDAFEHEVLTKRSSRYHQKRDNRYGGLHDIYSLQELLDEEEDDELLDTYTTPSKGSQKRSNSTPENPRPKRTLSSRSPYVLFSPNTFSPSVTPSQKYTARSSRGEVVALFGSVQGPSWSGRGGRSCTPKLFGSPEENLTKSYKFMFQKALDVREVLSWRIEELGDVLKSHHHLEDFASVLLPAQEPVTVLGQIGCDSNGKLNAKSVVLEGDREHSSGRQVPLDLSELKEYSLFPGQIVALEGTNSTGRKMVVSKLYEGVPLPFHTPPEPAPEQRMVLVACGPYTTSDSIAYDPLADLVEVIVRDRPDVCILFGPFLDAKHEQVENCQLLGSFAEVFKLCLKTIIEGTRSAGSQLVFVPSLRDVHHDYIYPQPPFLYPELPKDDKPRVHFVSDPCTLDVDGVVFGLTSTDLLFHMGAEEISSSSGISDRFTRILKHILTQRSYYPLYPPSEELNVDYETFYSYASLPVTPDVLITPSELRYFVKDVLGCVCINPGRLTKGQVGGTYARLYIQREDATGERKSPCVAAQVVKI
SIO_010081: POLA2
subclass of: SO_0000673
so part of: POLA2
location: join(103818..103905,105019..105146,105241..105326,105549..105603,105707..105813,105905..106098,106203..106291,106412..106567,106667..106729,106819..106861,107010..107128,107662..107700,107961..108034,109092..109200,110598..110704,111024..111083,111483..111609,111850..111996)
location: region:103818-111996:1
so has part: feature:103818-103905:1:exon
so has part: feature:105019-105146:1:exon
so has part: feature:105241-105326:1:exon
so has part: feature:105549-105603:1:exon
so has part: feature:105707-105813:1:exon
so has part: feature:105905-106098:1:exon
so has part: feature:106203-106291:1:exon
so has part: feature:106412-106567:1:exon
so has part: feature:106667-106729:1:exon
so has part: feature:106819-106861:1:exon
so has part: feature:107010-107128:1:exon
so has part: feature:107662-107700:1:exon
so has part: feature:107961-108034:1:exon
so has part: feature:109092-109200:1:exon
so has part: feature:110598-110704:1:exon
so has part: feature:111024-111083:1:exon
so has part: feature:111483-111609:1:exon
so has part: feature:111850-111996:1:exon

XP_052631036.1
type: Protein
SIO_000068: ncbiprotein

position:103818:1
position: 103818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103818-103905:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105019-105146:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105241-105326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105549-105603:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:105707-105813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105905-106098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:106203-106291:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106412-106567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106667-106729:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106819-106861:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107010-107128:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107662-107700:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107961-108034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:109092-109200:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:110598-110704:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:111024-111083:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:111483-111609:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:111850-111996:1:exon

CDC42EP2
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: CDC42EP2
note: CDC42 effector protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 113469..121610
location: region:113469-121610:1
so has part: feature:113469-121610:1:exon
subclass of: SO_0000010

128135993
type: Gene
SIO_000068: ncbigene

position:113469:1
position: 113469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121610:1
position: 121610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113469-121610:1:exon

CDC42EP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: CDC42EP2
product: CDC42 effector protein 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775085.1
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: join(113469..113943,119956..120775,120922..121610)
location: region:113469-121610:1
so has part: feature:113469-113943:1:exon
so has part: feature:119956-120775:1:exon
so has part: feature:120922-121610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113469-113943:1:exon

position:113943:1
position: 113943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119956-120775:1:exon

position:119956:1
position: 119956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120775:1
position: 120775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:120922-121610:1:exon

position:120922:1
position: 120922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDC42EP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: CDC42EP2
product: CDC42 effector protein 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775084.1
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: join(114003..114162,119956..120775,120922..121610)
location: region:114003-121610:1
so has part: feature:114003-114162:1:exon
so has part: feature:119956-120775:1:exon
so has part: feature:120922-121610:1:exon

position:114003:1
position: 114003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114003-114162:1:exon

position:114162:1
position: 114162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119956-120775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120922-121610:1:exon

LOC128135994
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128135994
note: uncharacterized LOC128135994; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(115002..115380)
location: region:115002-115380:-1
so has part: feature:115002-115380:-1:exon
subclass of: SO_0000011

128135994
type: Gene
SIO_000068: ncbigene

position:115002:-1
position: 115002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115380:-1
position: 115380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115002-115380:-1:exon

LOC128135994
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 202280
nc RNA class: lncRNA
gene: LOC128135994
product: uncharacterized LOC128135994
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008233241.1
SIO_010081: LOC128135994
subclass of: SO_0000673
so part of: LOC128135994
location: complement(join(115002..115219,115298..115380))
location: region:115002-115380:-1
so has part: feature:115298-115380:-1:exon
so has part: feature:115002-115219:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115298-115380:-1:exon

position:115298:-1
position: 115298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:115002-115219:-1:exon

position:115219:-1
position: 115219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDC42EP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: CDC42EP2
product: CDC42 effector protein 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775086.1
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: join(115297..115403,119956..120775,120922..121610)
location: region:115297-121610:1
so has part: feature:115297-115403:1:exon
so has part: feature:119956-120775:1:exon
so has part: feature:120922-121610:1:exon

position:115297:1
position: 115297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115297-115403:1:exon

position:115403:1
position: 115403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119956-120775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120922-121610:1:exon

CDC42EP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: CDC42EP2
product: CDC42 effector protein 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775087.1
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: join(117777..118319,119956..120775,120922..121610)
location: region:117777-121610:1
so has part: feature:117777-118319:1:exon
so has part: feature:119956-120775:1:exon
so has part: feature:120922-121610:1:exon

position:117777:1
position: 117777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117777-118319:1:exon

position:118319:1
position: 118319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119956-120775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120922-121610:1:exon

CDC42EP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: CDC42EP2
product: CDC42 effector protein 2, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775088.1
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: join(118420..119066,119956..120775,120922..121610)
location: region:118420-121610:1
so has part: feature:118420-119066:1:exon
so has part: feature:119956-120775:1:exon
so has part: feature:120922-121610:1:exon

position:118420:1
position: 118420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118420-119066:1:exon

position:119066:1
position: 119066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119956-120775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120922-121610:1:exon

CDC42EP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: CDC42EP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cdc42 effector protein 2
translation: MSTKVPIYLKRGSRKGKKEKLRDILSSDMISPPLGDFRHTIHIGSGGESDMFGDISFLQGKFHLLPRTEGSFDSDKDSPDAAPFEFSRTATISGCEQPSSETSSPLLKNAISLPVIGGPQALTLPSAQAPPKPPRLHLDDKAPSARSWEGGEENGEGRNAAPLPHPCASRFAAPTNGFAEEKGNAEPSFLSHAGSLLSLHVDLGPSILEDVLQVMEKHQAERVGGSIQDSGRQEILT
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: 120050..120763
location: region:120050-120763:1
so has part: feature:120050-120763:1:exon

XP_052631044.1
type: Protein
SIO_000068: ncbiprotein

position:120050:1
position: 120050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120763:1
position: 120763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120050-120763:1:exon

CDC42EP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: CDC42EP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cdc42 effector protein 2
translation: MSTKVPIYLKRGSRKGKKEKLRDILSSDMISPPLGDFRHTIHIGSGGESDMFGDISFLQGKFHLLPRTEGSFDSDKDSPDAAPFEFSRTATISGCEQPSSETSSPLLKNAISLPVIGGPQALTLPSAQAPPKPPRLHLDDKAPSARSWEGGEENGEGRNAAPLPHPCASRFAAPTNGFAEEKGNAEPSFLSHAGSLLSLHVDLGPSILEDVLQVMEKHQAERVGGSIQDSGRQEILT
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: 120050..120763
location: region:120050-120763:1
so has part: feature:120050-120763:1:exon

XP_052631045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120050-120763:1:exon

CDC42EP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: CDC42EP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cdc42 effector protein 2
translation: MSTKVPIYLKRGSRKGKKEKLRDILSSDMISPPLGDFRHTIHIGSGGESDMFGDISFLQGKFHLLPRTEGSFDSDKDSPDAAPFEFSRTATISGCEQPSSETSSPLLKNAISLPVIGGPQALTLPSAQAPPKPPRLHLDDKAPSARSWEGGEENGEGRNAAPLPHPCASRFAAPTNGFAEEKGNAEPSFLSHAGSLLSLHVDLGPSILEDVLQVMEKHQAERVGGSIQDSGRQEILT
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: 120050..120763
location: region:120050-120763:1
so has part: feature:120050-120763:1:exon

XP_052631046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120050-120763:1:exon

CDC42EP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: CDC42EP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cdc42 effector protein 2
translation: MSTKVPIYLKRGSRKGKKEKLRDILSSDMISPPLGDFRHTIHIGSGGESDMFGDISFLQGKFHLLPRTEGSFDSDKDSPDAAPFEFSRTATISGCEQPSSETSSPLLKNAISLPVIGGPQALTLPSAQAPPKPPRLHLDDKAPSARSWEGGEENGEGRNAAPLPHPCASRFAAPTNGFAEEKGNAEPSFLSHAGSLLSLHVDLGPSILEDVLQVMEKHQAERVGGSIQDSGRQEILT
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: 120050..120763
location: region:120050-120763:1
so has part: feature:120050-120763:1:exon

XP_052631047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120050-120763:1:exon

CDC42EP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: CDC42EP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cdc42 effector protein 2
translation: MSTKVPIYLKRGSRKGKKEKLRDILSSDMISPPLGDFRHTIHIGSGGESDMFGDISFLQGKFHLLPRTEGSFDSDKDSPDAAPFEFSRTATISGCEQPSSETSSPLLKNAISLPVIGGPQALTLPSAQAPPKPPRLHLDDKAPSARSWEGGEENGEGRNAAPLPHPCASRFAAPTNGFAEEKGNAEPSFLSHAGSLLSLHVDLGPSILEDVLQVMEKHQAERVGGSIQDSGRQEILT
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: 120050..120763
location: region:120050-120763:1
so has part: feature:120050-120763:1:exon

XP_052631048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120050-120763:1:exon

DPF2
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: DPF2
note: double PHD fingers 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 125065..140409
location: region:125065-140409:1
so has part: feature:125065-140409:1:exon
subclass of: SO_0000010

128135999
type: Gene
SIO_000068: ncbigene

position:125065:1
position: 125065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140409:1
position: 140409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125065-140409:1:exon

DPF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: DPF2
product: double PHD fingers 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775094.1
SIO_010081: DPF2
subclass of: SO_0000673
so part of: DPF2
location: join(125065..125161,129380..129540,129625..129732,129972..130135,131611..131703,132265..132343,133223..133264,135559..135696,135959..136087,136305..136417,137916..137997,138672..140409)
location: region:125065-140409:1
so has part: feature:125065-125161:1:exon
so has part: feature:129380-129540:1:exon
so has part: feature:129625-129732:1:exon
so has part: feature:129972-130135:1:exon
so has part: feature:131611-131703:1:exon
so has part: feature:132265-132343:1:exon
so has part: feature:133223-133264:1:exon
so has part: feature:135559-135696:1:exon
so has part: feature:135959-136087:1:exon
so has part: feature:136305-136417:1:exon
so has part: feature:137916-137997:1:exon
so has part: feature:138672-140409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125065-125161:1:exon

position:125161:1
position: 125161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:129380-129540:1:exon

position:129380:1
position: 129380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129540:1
position: 129540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:129625-129732:1:exon

position:129625:1
position: 129625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129732:1
position: 129732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:129972-130135:1:exon

position:129972:1
position: 129972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130135:1
position: 130135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:131611-131703:1:exon

position:131611:1
position: 131611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131703:1
position: 131703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:132265-132343:1:exon

position:132265:1
position: 132265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132343:1
position: 132343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:133223-133264:1:exon

position:133223:1
position: 133223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133264:1
position: 133264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:135559-135696:1:exon

position:135559:1
position: 135559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135696:1
position: 135696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:135959-136087:1:exon

position:135959:1
position: 135959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136087:1
position: 136087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:136305-136417:1:exon

position:136305:1
position: 136305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136417:1
position: 136417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:137916-137997:1:exon

position:137916:1
position: 137916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137997:1
position: 137997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:138672-140409:1:exon

position:138672:1
position: 138672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: DPF2
product: double PHD fingers 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775095.1
SIO_010081: DPF2
subclass of: SO_0000673
so part of: DPF2
location: join(125065..125161,129380..129540,129625..129732,129972..130135,131611..131703,132265..132343,135559..135696,135959..136087,136305..136417,137916..137997,138672..140409)
location: region:125065-140409:1
so has part: feature:125065-125161:1:exon
so has part: feature:129380-129540:1:exon
so has part: feature:129625-129732:1:exon
so has part: feature:129972-130135:1:exon
so has part: feature:131611-131703:1:exon
so has part: feature:132265-132343:1:exon
so has part: feature:135559-135696:1:exon
so has part: feature:135959-136087:1:exon
so has part: feature:136305-136417:1:exon
so has part: feature:137916-137997:1:exon
so has part: feature:138672-140409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125065-125161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129380-129540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129625-129732:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129972-130135:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131611-131703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132265-132343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135559-135696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135959-136087:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:136305-136417:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:137916-137997:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:138672-140409:1:exon

DPF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: DPF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ubi-d4 isoform X1
translation: MAAVVQNVVKLLGEQYYRDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKRHRGPGLAAGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLEALLRTDPLEKRALPDPRIDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRRGKGKAKGKGVGGARKKLDAAILEDRDKPYACDNSYKQKHTLKPPDRVCGKRYKNRPGLSYHYAHSHLAEEEGDDKDDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPPMSEPPEGSWSCHLCLDLLKEKASIYQNQNNS
SIO_010081: DPF2
subclass of: SO_0000673
so part of: DPF2
location: join(125130..125161,129380..129540,129625..129732,129972..130135,131611..131703,132265..132343,133223..133264,135559..135696,135959..136087,136305..136417,137916..137997,138672..138748)
location: region:125130-138748:1
so has part: feature:125130-125161:1:exon
so has part: feature:129380-129540:1:exon
so has part: feature:129625-129732:1:exon
so has part: feature:129972-130135:1:exon
so has part: feature:131611-131703:1:exon
so has part: feature:132265-132343:1:exon
so has part: feature:133223-133264:1:exon
so has part: feature:135559-135696:1:exon
so has part: feature:135959-136087:1:exon
so has part: feature:136305-136417:1:exon
so has part: feature:137916-137997:1:exon
so has part: feature:138672-138748:1:exon

XP_052631054.1
type: Protein
SIO_000068: ncbiprotein

position:125130:1
position: 125130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138748:1
position: 138748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125130-125161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129380-129540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129625-129732:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129972-130135:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131611-131703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132265-132343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133223-133264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135559-135696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:135959-136087:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:136305-136417:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:137916-137997:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138672-138748:1:exon

DPF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: DPF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ubi-d4 isoform X2
translation: MAAVVQNVVKLLGEQYYRDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKRHRGPGLAAGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLEALLRTDPLEKRALPDPRIDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRRGKGKAKGKGVGGARKKLDAAILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGDDKDDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPPMSEPPEGSWSCHLCLDLLKEKASIYQNQNNS
SIO_010081: DPF2
subclass of: SO_0000673
so part of: DPF2
location: join(125130..125161,129380..129540,129625..129732,129972..130135,131611..131703,132265..132343,135559..135696,135959..136087,136305..136417,137916..137997,138672..138748)
location: region:125130-138748:1
so has part: feature:125130-125161:1:exon
so has part: feature:129380-129540:1:exon
so has part: feature:129625-129732:1:exon
so has part: feature:129972-130135:1:exon
so has part: feature:131611-131703:1:exon
so has part: feature:132265-132343:1:exon
so has part: feature:135559-135696:1:exon
so has part: feature:135959-136087:1:exon
so has part: feature:136305-136417:1:exon
so has part: feature:137916-137997:1:exon
so has part: feature:138672-138748:1:exon

XP_052631055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125130-125161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129380-129540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129625-129732:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129972-130135:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131611-131703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132265-132343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135559-135696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135959-136087:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:136305-136417:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:137916-137997:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:138672-138748:1:exon

LOC128136000
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128136000
note: solute carrier family 22 member 6-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(141031..150423)
location: region:141031-150423:-1
so has part: feature:141031-150423:-1:exon
subclass of: SO_0000010

128136000
type: Gene
SIO_000068: ncbigene

position:141031:-1
position: 141031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150423:-1
position: 150423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141031-150423:-1:exon

LOC128136000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LOC128136000
product: solute carrier family 22 member 6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins
transcript id: XM_052775096.1
SIO_010081: LOC128136000
subclass of: SO_0000673
so part of: LOC128136000
location: complement(join(141031..141229,142468..142671,143915..144023,144936..145150,146160..146269,147439..147562,147712..147880,148793..148947,149832..149935,150020..150423))
location: region:141031-150423:-1
so has part: feature:150020-150423:-1:exon
so has part: feature:149832-149935:-1:exon
so has part: feature:148793-148947:-1:exon
so has part: feature:147712-147880:-1:exon
so has part: feature:147439-147562:-1:exon
so has part: feature:146160-146269:-1:exon
so has part: feature:144936-145150:-1:exon
so has part: feature:143915-144023:-1:exon
so has part: feature:142468-142671:-1:exon
so has part: feature:141031-141229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150020-150423:-1:exon

position:150020:-1
position: 150020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:149832-149935:-1:exon

position:149832:-1
position: 149832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149935:-1
position: 149935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148793-148947:-1:exon

position:148793:-1
position: 148793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148947:-1
position: 148947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147712-147880:-1:exon

position:147712:-1
position: 147712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147880:-1
position: 147880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:147439-147562:-1:exon

position:147439:-1
position: 147439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147562:-1
position: 147562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:146160-146269:-1:exon

position:146160:-1
position: 146160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146269:-1
position: 146269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:144936-145150:-1:exon

position:144936:-1
position: 144936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145150:-1
position: 145150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:143915-144023:-1:exon

position:143915:-1
position: 143915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144023:-1
position: 144023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:142468-142671:-1:exon

position:142468:-1
position: 142468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142671:-1
position: 142671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:141031-141229:-1:exon

position:141229:-1
position: 141229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128136000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LOC128136000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 6-like
translation: MTFVELLARLGGMGRFQVTYVAALAVPLLMLASHNLLQNFTAGVPEHHCRPRPVANNSTGDVPLLVSIPSDGHHRPQRCRRYVEPQWHLLEVNGTVNGTANGAATEPCRDGWTYRDGVFAHTIVTEWDLVCESKRLRQVAQSIYMAGILLGSGLFGVLSDKFGRRALLTWCYLQLGATGAGTAAAPTFVVYCLCRFLAGLAMAGVSLNSASLCMEWIPTEARAVVGTINGYCYTLGQFVLAATAFGVPHWRWLQLVVSLPFFLFFLYSWLFVESARWQVISGRPDLALKGLRKVARVNRRKEEGDKLSEEALGALVRPEPPLPGGTLAALVRTPGMRTVSCGVSFVWFSTSFAYYGLAMDLQGFGVDIYLSQLVFGAVDIPAKLASVLAISCVGRRVAQGGSLALAGICILANIVVPMELQTLRMAFAVIGKGSLAASFNCAYIFSGELFPTVIRQTGMGLGGTMARVGGMVAPLVRMAADVTPALPLVIYGAAPIISAIATCFLPETRNMPLPETVKDVERRAGHLKDEEVTVPLSTTKTKDGV
SIO_010081: LOC128136000
subclass of: SO_0000673
so part of: LOC128136000
location: complement(join(141160..141229,142468..142671,143915..144023,144936..145150,146160..146269,147439..147562,147712..147880,148793..148947,149832..149935,150020..150397))
location: region:141160-150397:-1
so has part: feature:150020-150397:-1:exon
so has part: feature:149832-149935:-1:exon
so has part: feature:148793-148947:-1:exon
so has part: feature:147712-147880:-1:exon
so has part: feature:147439-147562:-1:exon
so has part: feature:146160-146269:-1:exon
so has part: feature:144936-145150:-1:exon
so has part: feature:143915-144023:-1:exon
so has part: feature:142468-142671:-1:exon
so has part: feature:141160-141229:-1:exon

XP_052631056.1
type: Protein
SIO_000068: ncbiprotein

position:141160:-1
position: 141160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150397:-1
position: 150397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150020-150397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149832-149935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148793-148947:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147712-147880:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147439-147562:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:146160-146269:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144936-145150:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:143915-144023:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142468-142671:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:141160-141229:-1:exon

SLC22A6
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: SLC22A6
note: solute carrier family 22 member 6; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(154551..160198)
location: region:154551-160198:-1
so has part: feature:154551-160198:-1:exon
subclass of: SO_0000010

128135997
type: Gene
SIO_000068: ncbigene

position:154551:-1
position: 154551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160198:-1
position: 160198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154551-160198:-1:exon

SLC22A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: SLC22A6
product: solute carrier family 22 member 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins
transcript id: XM_052775092.1
SIO_010081: SLC22A6
subclass of: SO_0000673
so part of: SLC22A6
location: complement(join(154551..154667,155055..155258,155346..155454,155688..155902,156164..156279,156753..156876,157757..157925,158006..158160,158277..158380,158845..160198))
location: region:154551-160198:-1
so has part: feature:158845-160198:-1:exon
so has part: feature:158277-158380:-1:exon
so has part: feature:158006-158160:-1:exon
so has part: feature:157757-157925:-1:exon
so has part: feature:156753-156876:-1:exon
so has part: feature:156164-156279:-1:exon
so has part: feature:155688-155902:-1:exon
so has part: feature:155346-155454:-1:exon
so has part: feature:155055-155258:-1:exon
so has part: feature:154551-154667:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:158845-160198:-1:exon

position:158845:-1
position: 158845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158277-158380:-1:exon

position:158277:-1
position: 158277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158380:-1
position: 158380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:158006-158160:-1:exon

position:158006:-1
position: 158006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158160:-1
position: 158160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:157757-157925:-1:exon

position:157757:-1
position: 157757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157925:-1
position: 157925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:156753-156876:-1:exon

position:156753:-1
position: 156753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156876:-1
position: 156876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:156164-156279:-1:exon

position:156164:-1
position: 156164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156279:-1
position: 156279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:155688-155902:-1:exon

position:155688:-1
position: 155688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155902:-1
position: 155902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:155346-155454:-1:exon

position:155346:-1
position: 155346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155454:-1
position: 155454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:155055-155258:-1:exon

position:155055:-1
position: 155055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155258:-1
position: 155258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:154551-154667:-1:exon

position:154667:-1
position: 154667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC22A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: SLC22A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 6
translation: MAFASLLEHVGGMGRFQVASVLLLALPILMMASHNLLQNFTAATSDHRCRLRWEANATSLDPWDLLKVSVPQGERCRRFVTPQWWLLEANGSAANTSWLETEPCRDGWTYDRSVFTSTIITEWDLVCSSRSLKQLAQSLYMTGILVGGIIFGGLSDRFGRRSLLTWCYLQMGTMGICSSFAPTFTVYCLFRFLTGMAFSGILLNSVSLSLEWMPTRTRALVGTFMGYWYTIGQFLLAGVAYAIPDWRWLQFTVSLPFLCFFLYSWWLTESARWLVMVGKSHQALKELQKVARINGKKEEGEKLDIEVLRSYMQKEMASSRSHHTVVDLVRTPVVRRISCCLCFVWFSTSFAYYGLAMDLQNFDFNIYVIQLVFGAVDIPAKLVSILTITFVGRRFTQSLALILAGLAILANVLVPRDLRTLRTALAVFGKGCLAASFNCVFLYTGELYPTVIRQTGMGLANTMARLGSITAPLVKMAGEVFPTLPFIIYGAAPVVSGLVAIFLPETRDRALPETVEEVEGRTKPQKDEAQHLQVPLQPTQPSSTTGPC
SIO_010081: SLC22A6
subclass of: SO_0000673
so part of: SLC22A6
location: complement(join(154583..154667,155055..155258,155346..155454,155688..155902,156164..156279,156753..156876,157757..157925,158006..158160,158277..158380,158845..159210))
location: region:154583-159210:-1
so has part: feature:158845-159210:-1:exon
so has part: feature:158277-158380:-1:exon
so has part: feature:158006-158160:-1:exon
so has part: feature:157757-157925:-1:exon
so has part: feature:156753-156876:-1:exon
so has part: feature:156164-156279:-1:exon
so has part: feature:155688-155902:-1:exon
so has part: feature:155346-155454:-1:exon
so has part: feature:155055-155258:-1:exon
so has part: feature:154583-154667:-1:exon

XP_052631052.1
type: Protein
SIO_000068: ncbiprotein

position:154583:-1
position: 154583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159210:-1
position: 159210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158845-159210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158277-158380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158006-158160:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157757-157925:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156753-156876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156164-156279:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155688-155902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155346-155454:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155055-155258:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154583-154667:-1:exon

LOC128135998
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128135998
note: solute carrier family 22 member 6-A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(160328..163677)
location: region:160328-163677:-1
so has part: feature:160328-163677:-1:exon
subclass of: SO_0000010

128135998
type: Gene
SIO_000068: ncbigene

position:160328:-1
position: 160328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163677:-1
position: 163677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160328-163677:-1:exon

LOC128135998
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LOC128135998
product: solute carrier family 22 member 6-A-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775093.1
SIO_010081: LOC128135998
subclass of: SO_0000673
so part of: LOC128135998
location: complement(join(160328..160586,161059..161262,161372..161480,161787..162001,162387..162502,162589..162712,162797..162965,163358..163512,163618..163677))
location: region:160328-163677:-1
so has part: feature:163618-163677:-1:exon
so has part: feature:163358-163512:-1:exon
so has part: feature:162797-162965:-1:exon
so has part: feature:162589-162712:-1:exon
so has part: feature:162387-162502:-1:exon
so has part: feature:161787-162001:-1:exon
so has part: feature:161372-161480:-1:exon
so has part: feature:161059-161262:-1:exon
so has part: feature:160328-160586:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:163618-163677:-1:exon

position:163618:-1
position: 163618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:163358-163512:-1:exon

position:163358:-1
position: 163358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163512:-1
position: 163512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:162797-162965:-1:exon

position:162797:-1
position: 162797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162965:-1
position: 162965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:162589-162712:-1:exon

position:162589:-1
position: 162589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162712:-1
position: 162712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:162387-162502:-1:exon

position:162387:-1
position: 162387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162502:-1
position: 162502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:161787-162001:-1:exon

position:161787:-1
position: 161787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162001:-1
position: 162001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:161372-161480:-1:exon

position:161372:-1
position: 161372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161480:-1
position: 161480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:161059-161262:-1:exon

position:161059:-1
position: 161059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161262:-1
position: 161262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:160328-160586:-1:exon

position:160586:-1
position: 160586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128135998
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LOC128135998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 6-A-like
translation: MAGVLVGALVLGGLSDRFGRKAMLMWSYLQLGVMGTCTAFAPNYASYCVFRFAGGMALSGFGLSIACLVVEWIPTPYRAITVAITGFAYTLGQILLAGVAYAVPHWRWLQLAVSLPFFIFLLYSWWLAESARWLVLSGKAERAVKVLQRVARINKRKEEGEKITVEILKSNMKEELAGLKSSYTISDLVRTPVIRHIFFCLSIVWFSISFSYYGLAMDLQNFGVSIYLIQVIFGAVDFPAKVVVTVSLSYIGRRVSLMVALFLAGLVIIANIFVSTELQTVRTALAVIGKGCLSASFNCVFLYTTELYPTPIRQTGLGFGSTMARVGGIVAPLVKMMDEYYPFLPPAVYGVAPVVAAVAAGFLPETLNTPLPDTIEEVESRAKRKKTDDPKEKIPLQPQDKAPQKEA
SIO_010081: LOC128135998
subclass of: SO_0000673
so part of: LOC128135998
location: complement(join(160505..160586,161059..161262,161372..161480,161787..162001,162387..162502,162589..162712,162797..162965,163358..163512,163618..163667))
location: region:160505-163667:-1
so has part: feature:163618-163667:-1:exon
so has part: feature:163358-163512:-1:exon
so has part: feature:162797-162965:-1:exon
so has part: feature:162589-162712:-1:exon
so has part: feature:162387-162502:-1:exon
so has part: feature:161787-162001:-1:exon
so has part: feature:161372-161480:-1:exon
so has part: feature:161059-161262:-1:exon
so has part: feature:160505-160586:-1:exon

XP_052631053.1
type: Protein
SIO_000068: ncbiprotein

position:160505:-1
position: 160505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163667:-1
position: 163667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163618-163667:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163358-163512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162797-162965:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162589-162712:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162387-162502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161787-162001:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161372-161480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:161059-161262:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160505-160586:-1:exon