Harpia harpyja isolate bHarHar1 chromosome 26, bHarHar1 primary haplotype, whole genome shotgun sequence.
type: Entry
definition: Harpia harpyja isolate bHarHar1 chromosome 26, bHarHar1 primary haplotype, whole genome shotgun sequence.
sequence version: NC_068965.1
sequence date: 2023-02-26
sequence: sequence
division: CON
label: NC_068965.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA910140
dblink: SAMN31530492
keyword: WGS
keyword: RefSeq
source: Harpia harpyja (harpy eagle)
organism: Harpia harpyja
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Accipitriformes; Accipitridae; Accipitrinae; Harpia.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM048739.1.\nAssembly name: bHarHar1 primary haplotype\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2022/11/27. The original whole-genome shotgun project has the\naccession JAPMHW000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 28-SEP-2021\nAssembly Method :: Hifiasm v. 0.15.1-r334; purge_dups v.\n 1.2.5; Bionano solve v. 3.6; Salsa v. 2.3\nAssembly Name :: bHarHar1 primary haplotype\nDiploid :: Principal Haplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 54.0x\nSequencing Technology :: PacBio Sequel II HiFi; Bionano optical\n mapping; Arima HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Updated annotation\nAnnotation Name :: GCF_026419915.1-RS_2023_02\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 02/25/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 306918
topology: linear
so has quality: SO_0000987
location: 1..306918
location: region:1-306918:1
RO_0002162: 202280

NC_068965
type: RefSeq
SIO_000068: refseq

PRJNA910140
type: BioProject
SIO_000068: bioproject

SAMN31530492
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306918:1
position: 306918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-306918:1:source
so part of: sequence
organism: Harpia harpyja
mol type: genomic DNA
isolate: bHarHar1
chromosome: 26
sex: female
tissue type: blood
dev stage: adult
country: Brazil: Sao Jose do Laguinho / / Gleba Vila Amazonia in the municipality of Parintins
lat lon: 2.625833 S 56.649722 W
collection date: 2002-06-24
collected by: Tomas Hrbek

202280
type: Taxonomy
SIO_000068: taxonomy

LOC128135975
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128135975
note: CXXC-type zinc finger protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<130..11705)
location: region:130-11705:-1
so has part: feature:130-11705:-1:exon
subclass of: SO_0000010

128135975
type: Gene
SIO_000068: ncbigene

position:130:-1
position: 130
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:11705:-1
position: 11705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130-11705:-1:exon

LOC128135975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LOC128135975
product: CXXC-type zinc finger protein 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_052775060.1
SIO_010081: LOC128135975
subclass of: SO_0000673
so part of: LOC128135975
location: complement(join(<130..322,593..682,1454..1503,2402..2512,2909..3116,4758..4942,5904..6011,7811..7960,8530..8556,9891..10047,10206..10321,10806..10906,11286..11383,11551..11705))
location: region:130-11705:-1
so has part: feature:11551-11705:-1:exon
so has part: feature:11286-11383:-1:exon
so has part: feature:10806-10906:-1:exon
so has part: feature:10206-10321:-1:exon
so has part: feature:9891-10047:-1:exon
so has part: feature:8530-8556:-1:exon
so has part: feature:7811-7960:-1:exon
so has part: feature:5904-6011:-1:exon
so has part: feature:4758-4942:-1:exon
so has part: feature:2909-3116:-1:exon
so has part: feature:2402-2512:-1:exon
so has part: feature:1454-1503:-1:exon
so has part: feature:593-682:-1:exon
so has part: feature:130-322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11551-11705:-1:exon

position:11551:-1
position: 11551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11286-11383:-1:exon

position:11286:-1
position: 11286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11383:-1
position: 11383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10806-10906:-1:exon

position:10806:-1
position: 10806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10906:-1
position: 10906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10206-10321:-1:exon

position:10206:-1
position: 10206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10321:-1
position: 10321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9891-10047:-1:exon

position:9891:-1
position: 9891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10047:-1
position: 10047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8530-8556:-1:exon

position:8530:-1
position: 8530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8556:-1
position: 8556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7811-7960:-1:exon

position:7811:-1
position: 7811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7960:-1
position: 7960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5904-6011:-1:exon

position:5904:-1
position: 5904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6011:-1
position: 6011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4758-4942:-1:exon

position:4758:-1
position: 4758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4942:-1
position: 4942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2909-3116:-1:exon

position:2909:-1
position: 2909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3116:-1
position: 3116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2402-2512:-1:exon

position:2402:-1
position: 2402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2512:-1
position: 2512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1454-1503:-1:exon

position:1454:-1
position: 1454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1503:-1
position: 1503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:593-682:-1:exon

position:593:-1
position: 593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682:-1
position: 682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:130-322:-1:exon

position:322:-1
position: 322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128135975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LOC128135975
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: CXXC-type zinc finger protein 1-like
translation: MDSEFSDAEAGPGGEENAPVYCVCRKPDINCFMIGCDNCNEWFHGDCINITEKMAKAIREWYCLQCREKDPTLEIRYRHKKWREKEREHESVKAQELALEQGRAAKIKRSARMCGECEACRRPEDCGQCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYKYFPTSLARGREGELELLKEQLGAAGPPESLSDEELPLDPRLYQELCAGAFDEHGLPWLSDPEDAPFLDPVLRKRAVKVKHVKRREKKSDKKKEERYKRHRQKPRHRERSRHPERPDARDPAGLGQCLGPGCTRPARPPSKYCSEACGVKLAANRIYEILPQRIQQWQQSPCVAEEHGKRLLERIRREQHQARLRLQEMERRFHELEGLIARAKGHPPREDEESTEGDSEDTDLQIFCVSCGHPINPKVALRHMERCYAKYESQTSFGSMYPTRIEGASATVTTAGRNCAVPRWTWSVSAWWVLHPPDDPGGVPVSRQCPHVPGDVPDGVPRVPDSIPMSPSDVPDGVPRVLDSVPMPPVMLPQVSPMSPV
SIO_010081: LOC128135975
subclass of: SO_0000673
so part of: LOC128135975
location: complement(join(<130..322,593..682,1454..1503,2402..2512,2909..3116,4758..4942,5904..6011,7811..7960,8530..8556,9891..10047,10206..10321,10806..10906,11286..11383,11551..11553))
location: region:130-11553:-1
so has part: feature:11551-11553:-1:exon
so has part: feature:11286-11383:-1:exon
so has part: feature:10806-10906:-1:exon
so has part: feature:10206-10321:-1:exon
so has part: feature:9891-10047:-1:exon
so has part: feature:8530-8556:-1:exon
so has part: feature:7811-7960:-1:exon
so has part: feature:5904-6011:-1:exon
so has part: feature:4758-4942:-1:exon
so has part: feature:2909-3116:-1:exon
so has part: feature:2402-2512:-1:exon
so has part: feature:1454-1503:-1:exon
so has part: feature:593-682:-1:exon
so has part: feature:130-322:-1:exon

XP_052631020.1
type: Protein
SIO_000068: ncbiprotein

position:11553:-1
position: 11553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11551-11553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11286-11383:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10806-10906:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10206-10321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9891-10047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8530-8556:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7811-7960:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5904-6011:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4758-4942:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2909-3116:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2402-2512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1454-1503:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:593-682:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:130-322:-1:exon

LOC128135958
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128135958
note: involucrin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12000..16686)
location: region:12000-16686:-1
so has part: feature:12000-16686:-1:exon
subclass of: SO_0000010

128135958
type: Gene
SIO_000068: ncbigene

position:12000:-1
position: 12000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16686:-1
position: 16686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12000-16686:-1:exon

LOC128135958
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LOC128135958
product: involucrin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_052775034.1
SIO_010081: LOC128135958
subclass of: SO_0000673
so part of: LOC128135958
location: complement(join(12000..12101,12191..12280,12482..12536,12663..12729,12810..12873,12957..13046,13551..13605,13726..13773,13889..13963,14072..14143,14243..14270,16588..16686))
location: region:12000-16686:-1
so has part: feature:16588-16686:-1:exon
so has part: feature:14243-14270:-1:exon
so has part: feature:14072-14143:-1:exon
so has part: feature:13889-13963:-1:exon
so has part: feature:13726-13773:-1:exon
so has part: feature:13551-13605:-1:exon
so has part: feature:12957-13046:-1:exon
so has part: feature:12810-12873:-1:exon
so has part: feature:12663-12729:-1:exon
so has part: feature:12482-12536:-1:exon
so has part: feature:12191-12280:-1:exon
so has part: feature:12000-12101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16588-16686:-1:exon

position:16588:-1
position: 16588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14243-14270:-1:exon

position:14243:-1
position: 14243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14270:-1
position: 14270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14072-14143:-1:exon

position:14072:-1
position: 14072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14143:-1
position: 14143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13889-13963:-1:exon

position:13889:-1
position: 13889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13963:-1
position: 13963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13726-13773:-1:exon

position:13726:-1
position: 13726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13773:-1
position: 13773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13551-13605:-1:exon

position:13551:-1
position: 13551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13605:-1
position: 13605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12957-13046:-1:exon

position:12957:-1
position: 12957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13046:-1
position: 13046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12810-12873:-1:exon

position:12810:-1
position: 12810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12873:-1
position: 12873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12663-12729:-1:exon

position:12663:-1
position: 12663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12729:-1
position: 12729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12482-12536:-1:exon

position:12482:-1
position: 12482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12536:-1
position: 12536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:12191-12280:-1:exon

position:12191:-1
position: 12191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12280:-1
position: 12280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:12000-12101:-1:exon

position:12101:-1
position: 12101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128135958
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LOC128135958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: involucrin-like
translation: MDGDPHGVPCPPAGGPQLEALLVRIRSLHRARQVLARQMAEVQGQSEGLQRHLEQLEERQAALEGLWQQKQEALRVARLRREEVEAEGQRHQGLCLSRQQDLEGAGEQREHLRHLRRGQRQKFWQQLDDIMEEHKHLCEAHAPAQLEAELVQLEEAREKLLSQERHLLEAEEQLGPEAHVAMRLVEQEEEGARQRLEAELGQRQVHLRHRDRLAEELEQLQRPLEAPPE
SIO_010081: LOC128135958
subclass of: SO_0000673
so part of: LOC128135958
location: complement(join(12047..12101,12191..12280,12482..12536,12663..12729,12810..12873,12957..13046,13551..13605,13726..13773,13889..13963,14072..14143,14243..14261))
location: region:12047-14261:-1
so has part: feature:14243-14261:-1:exon
so has part: feature:14072-14143:-1:exon
so has part: feature:13889-13963:-1:exon
so has part: feature:13726-13773:-1:exon
so has part: feature:13551-13605:-1:exon
so has part: feature:12957-13046:-1:exon
so has part: feature:12810-12873:-1:exon
so has part: feature:12663-12729:-1:exon
so has part: feature:12482-12536:-1:exon
so has part: feature:12191-12280:-1:exon
so has part: feature:12047-12101:-1:exon

XP_052630994.1
type: Protein
SIO_000068: ncbiprotein

position:12047:-1
position: 12047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14261:-1
position: 14261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14243-14261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14072-14143:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13889-13963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13726-13773:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13551-13605:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12957-13046:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12810-12873:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12663-12729:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12482-12536:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12191-12280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12047-12101:-1:exon

LOC128135961
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128135961
note: uncharacterized LOC128135961; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15429..16331)
location: region:15429-16331:-1
so has part: feature:15429-16331:-1:exon
subclass of: SO_0000011

128135961
type: Gene
SIO_000068: ncbigene

position:15429:-1
position: 15429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16331:-1
position: 16331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15429-16331:-1:exon

LOC128135961
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 202280
nc RNA class: lncRNA
gene: LOC128135961
product: uncharacterized LOC128135961
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008233234.1
SIO_010081: LOC128135961
subclass of: SO_0000673
so part of: LOC128135961
location: complement(join(15429..15612,15659..16041,16084..16331))
location: region:15429-16331:-1
so has part: feature:16084-16331:-1:exon
so has part: feature:15659-16041:-1:exon
so has part: feature:15429-15612:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16084-16331:-1:exon

position:16084:-1
position: 16084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15659-16041:-1:exon

position:15659:-1
position: 15659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16041:-1
position: 16041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15429-15612:-1:exon

position:15612:-1
position: 15612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MON1B
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: MON1B
note: MON1 homolog B, secretory trafficking associated; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16560..19610)
location: region:16560-19610:-1
so has part: feature:16560-19610:-1:exon
subclass of: SO_0000010

128135956
type: Gene
SIO_000068: ncbigene

position:16560:-1
position: 16560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19610:-1
position: 19610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16560-19610:-1:exon

MON1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: MON1B
product: MON1 homolog B, secretory trafficking associated
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 6 bases in 5 codons
transcript id: XM_052775031.1
SIO_010081: MON1B
subclass of: SO_0000673
so part of: MON1B
location: complement(join(16560..16789,17818..17967,18060..18894,18992..19384,19477..19610))
location: region:16560-19610:-1
so has part: feature:19477-19610:-1:exon
so has part: feature:18992-19384:-1:exon
so has part: feature:18060-18894:-1:exon
so has part: feature:17818-17967:-1:exon
so has part: feature:16560-16789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19477-19610:-1:exon

position:19477:-1
position: 19477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18992-19384:-1:exon

position:18992:-1
position: 18992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19384:-1
position: 19384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18060-18894:-1:exon

position:18060:-1
position: 18060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18894:-1
position: 18894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17818-17967:-1:exon

position:17818:-1
position: 17818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17967:-1
position: 17967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16560-16789:-1:exon

position:16789:-1
position: 16789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MON1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: MON1B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 6 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: vacuolar fusion protein MON1 homolog B
translation: MAAAAAGSPPGEGTPQPPDAAEADPTEPAAAMSSPDYRRDEEEEVSPAAVPAAMTSSGCQHAGEEEEVTAAVTTVAAMTSPGCRRGGEEDVTAAGWRCRRKHVFVLSEAGKPIYSRHGNEEALAATMGVMMALVSFIQSGGNAIRAICSEDRTLVFEQRGPLLLVSVSRTRQSAAQLRRELAFVHEQILSLLTRGGIARVFARRRGYDLRRLLAGAEAVLDRLLSGAAADGRLLLGAARCLPLPAALRRAVSGALRRAAAAAVPAPALALLAAGGRLVTAARQRALAEGGRLCASDLHLLLNLLGXGVGAGEVWTPVCLPRFNPDGYFYAYAAALGEEEEEEGSGGTGGVTLILLSTEREGFYAAAGCRRRLEETLRAQGWLGELGAAVRGGAGYGPARPGAPELRHFLYKPLEGPEEMQQLPQFTSPELEDPYTSEEEQHRLFDLYHYLHSRVHSPHRPLRLLYHVAEKETLLAWVTSKFELYGCFSPLVTKAGAIGVLTKLLRWLKKEEDWLFIRYPPPYCAAPARPEGAEAEG
SIO_010081: MON1B
subclass of: SO_0000673
so part of: MON1B
location: complement(join(16607..16789,17818..17967,18060..18894,18992..19384,19477..19531))
location: region:16607-19531:-1
so has part: feature:19477-19531:-1:exon
so has part: feature:18992-19384:-1:exon
so has part: feature:18060-18894:-1:exon
so has part: feature:17818-17967:-1:exon
so has part: feature:16607-16789:-1:exon

XP_052630991.1
type: Protein
SIO_000068: ncbiprotein

position:16607:-1
position: 16607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19531:-1
position: 19531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19477-19531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18992-19384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18060-18894:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17818-17967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16607-16789:-1:exon

LOC128135948
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128135948
note: uncharacterized LOC128135948; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 21610..23302
location: region:21610-23302:1
so has part: feature:21610-23302:1:exon
subclass of: SO_0000010

128135948
type: Gene
SIO_000068: ncbigene

position:21610:1
position: 21610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23302:1
position: 23302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21610-23302:1:exon

LOC128135948
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LOC128135948
product: uncharacterized LOC128135948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_052775021.1
SIO_010081: LOC128135948
subclass of: SO_0000673
so part of: LOC128135948
location: join(21610..21732,21858..22101,23024..23098,23197..23302)
location: region:21610-23302:1
so has part: feature:21610-21732:1:exon
so has part: feature:21858-22101:1:exon
so has part: feature:23024-23098:1:exon
so has part: feature:23197-23302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21610-21732:1:exon

position:21732:1
position: 21732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21858-22101:1:exon

position:21858:1
position: 21858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22101:1
position: 22101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23024-23098:1:exon

position:23024:1
position: 23024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23098:1
position: 23098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:23197-23302:1:exon

position:23197:1
position: 23197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128135948
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LOC128135948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC128135948
translation: MRGRGPTLPTPGNRKREERPKRPGGPQEFGGDPSHLPPPDHEPVGASGAPPHPPPPQWTPPTPWSTKPAGGVGPEDETPPLLDKMPPLLTETTPLLGKTPPLQAPPPSLPGSPLRRPSPTLAASPRPGDGAYEVVTPHGDPGSTPCLGFNFRIGKPKGPREPPAEWSRV
SIO_010081: LOC128135948
subclass of: SO_0000673
so part of: LOC128135948
location: join(21610..21732,21858..22101,23024..23098,23197..23264)
location: region:21610-23264:1
so has part: feature:21610-21732:1:exon
so has part: feature:21858-22101:1:exon
so has part: feature:23024-23098:1:exon
so has part: feature:23197-23264:1:exon

XP_052630981.1
type: Protein
SIO_000068: ncbiprotein

position:23264:1
position: 23264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21610-21732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21858-22101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23024-23098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23197-23264:1:exon

IMP4
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: IMP4
note: IMP U3 small nucleolar ribonucleoprotein 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(23398..28007)
location: region:23398-28007:-1
so has part: feature:23398-28007:-1:exon
subclass of: SO_0000010

128135960
type: Gene
SIO_000068: ncbigene

position:23398:-1
position: 23398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28007:-1
position: 28007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23398-28007:-1:exon

IMP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: IMP4
product: IMP U3 small nucleolar ribonucleoprotein 4
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_052775036.1
SIO_010081: IMP4
subclass of: SO_0000673
so part of: IMP4
location: complement(join(23398..23617,23709..23779,23886..23980,24433..24587,25082..25215,25767..25876,26251..26340,27198..27306,27896..28007))
location: region:23398-28007:-1
so has part: feature:27896-28007:-1:exon
so has part: feature:27198-27306:-1:exon
so has part: feature:26251-26340:-1:exon
so has part: feature:25767-25876:-1:exon
so has part: feature:25082-25215:-1:exon
so has part: feature:24433-24587:-1:exon
so has part: feature:23886-23980:-1:exon
so has part: feature:23709-23779:-1:exon
so has part: feature:23398-23617:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27896-28007:-1:exon

position:27896:-1
position: 27896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27198-27306:-1:exon

position:27198:-1
position: 27198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27306:-1
position: 27306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:26251-26340:-1:exon

position:26251:-1
position: 26251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26340:-1
position: 26340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:25767-25876:-1:exon

position:25767:-1
position: 25767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25876:-1
position: 25876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:25082-25215:-1:exon

position:25082:-1
position: 25082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25215:-1
position: 25215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:24433-24587:-1:exon

position:24433:-1
position: 24433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24587:-1
position: 24587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:23886-23980:-1:exon

position:23886:-1
position: 23886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23980:-1
position: 23980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:23709-23779:-1:exon

position:23709:-1
position: 23709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23779:-1
position: 23779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:23398-23617:-1:exon

position:23617:-1
position: 23617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IMP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: IMP4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: U3 small nucleolar ribonucleoprotein protein IMP4
translation: MLRRQARERREYLQRRAQEDRLRRQQDKKERLRQALDENRLLPTELRREALALQKELEFDTPGVWAVNTSGSQDDEYRWAGLEPPKVMVTTSREPSSRLRVFAKELCLLIPGARRMNRGRAELGALVGACRAAGVTDLLVLHETRGRPDGLSLCHLPHGPTAHFTLSGAVLRQEVGGLGGAPLGAPHLLLLRLDSPLGRRVGTILKHLFPVPRPDSRRVVTFANEDDVILVRNHVYRRQGRTVELEEVGPRFQLRPYLIRLGTLEQGDTADVEWRWHPYTATAPKRRLLSAQ
SIO_010081: IMP4
subclass of: SO_0000673
so part of: IMP4
location: complement(join(23505..23617,23709..23779,23886..23980,24433..24587,25082..25215,25767..25876,26251..26340,27198..27306,27896..27898))
location: region:23505-27898:-1
so has part: feature:27896-27898:-1:exon
so has part: feature:27198-27306:-1:exon
so has part: feature:26251-26340:-1:exon
so has part: feature:25767-25876:-1:exon
so has part: feature:25082-25215:-1:exon
so has part: feature:24433-24587:-1:exon
so has part: feature:23886-23980:-1:exon
so has part: feature:23709-23779:-1:exon
so has part: feature:23505-23617:-1:exon

XP_052630996.1
type: Protein
SIO_000068: ncbiprotein

position:23505:-1
position: 23505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27898:-1
position: 27898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27896-27898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27198-27306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26251-26340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25767-25876:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:25082-25215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24433-24587:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23886-23980:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:23709-23779:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23505-23617:-1:exon

CCDC115
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: CCDC115
note: coiled-coil domain containing 115; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 27246..31117
location: region:27246-31117:1
so has part: feature:27246-31117:1:exon
subclass of: SO_0000010

128135957
type: Gene
SIO_000068: ncbigene

position:27246:1
position: 27246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31117:1
position: 31117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27246-31117:1:exon

CCDC115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: CCDC115
product: coiled-coil domain containing 115, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_052775032.1
SIO_010081: CCDC115
subclass of: SO_0000673
so part of: CCDC115
location: join(27246..27357,27907..28307,29147..29241,29631..29734,29954..30046,30532..30661,30982..31117)
location: region:27246-31117:1
so has part: feature:27246-27357:1:exon
so has part: feature:27907-28307:1:exon
so has part: feature:29147-29241:1:exon
so has part: feature:29631-29734:1:exon
so has part: feature:29954-30046:1:exon
so has part: feature:30532-30661:1:exon
so has part: feature:30982-31117:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27246-27357:1:exon

position:27357:1
position: 27357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27907-28307:1:exon

position:27907:1
position: 27907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28307:1
position: 28307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29147-29241:1:exon

position:29147:1
position: 29147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29241:1
position: 29241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:29631-29734:1:exon

position:29631:1
position: 29631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29734:1
position: 29734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:29954-30046:1:exon

position:29954:1
position: 29954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30046:1
position: 30046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:30532-30661:1:exon

position:30532:1
position: 30532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30661:1
position: 30661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:30982-31117:1:exon

position:30982:1
position: 30982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: CCDC115
product: coiled-coil domain containing 115, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_052775033.1
SIO_010081: CCDC115
subclass of: SO_0000673
so part of: CCDC115
location: join(27246..27357,27907..28303,29147..29241,29954..30046,30532..30661,30982..31117)
location: region:27246-31117:1
so has part: feature:27246-27357:1:exon
so has part: feature:27907-28303:1:exon
so has part: feature:29147-29241:1:exon
so has part: feature:29954-30046:1:exon
so has part: feature:30532-30661:1:exon
so has part: feature:30982-31117:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27246-27357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27907-28303:1:exon

position:28303:1
position: 28303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29147-29241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29954-30046:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30532-30661:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30982-31117:1:exon

CCDC115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: CCDC115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 115 isoform X1
translation: MTSEGDVMIFSLLHRSPHAGTSQRHHRRLAGQRGTNGSSRCCWKGAGRAPKMAAGGEGNATPSLRMAAEGRQHYALNQDGGRAGFSPPRRLPSARPRLPPAARCHWWRRGGRPLLLEEAAARREAAARAGVWRRRRWWQWRVGSPALDAAVLELLEALETLQQKRHLLTQLLRQGWLSLSQARYSLGCHRVSSLQYGATMVPRVRVFPRQDPGGPPHFEEVPGTGGDPEDPDPQQGGGRRAAAAPGSPRKRGFPPPAPPPIPWPGSGCWCPPACGRPRAASSRG
SIO_010081: CCDC115
subclass of: SO_0000673
so part of: CCDC115
location: join(27332..27357,27907..28307,29147..29241,29631..29734,29954..30046,30532..30661,30982..30987)
location: region:27332-30987:1
so has part: feature:27332-27357:1:exon
so has part: feature:27907-28307:1:exon
so has part: feature:29147-29241:1:exon
so has part: feature:29631-29734:1:exon
so has part: feature:29954-30046:1:exon
so has part: feature:30532-30661:1:exon
so has part: feature:30982-30987:1:exon

XP_052630992.1
type: Protein
SIO_000068: ncbiprotein

position:27332:1
position: 27332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30987:1
position: 30987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27332-27357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27907-28307:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29147-29241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29631-29734:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29954-30046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30532-30661:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30982-30987:1:exon

CCDC115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: CCDC115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 115 isoform X2
translation: MTSEGDVMIFSLLHRSPHAGTSQRHHRRLAGQRGTNGSSRCCWKGAGRAPKMAAGGEGNATPSLRMAAEGRQHYALNQDGGRAGFSPPRRLPSARPRLPPAARCHWWRRGGRPLLLEEAAARREAAARAGVWRRRRWWQWRGRQRWTRRCWSCWRRWRRCSRNVTSSPSSCARQDPGGPPHFEEVPGTGGDPEDPDPQQGGGRRAAAAPGSPRKRGFPPPAPPPIPWPGSGCWCPPACGRPRAASSRG
SIO_010081: CCDC115
subclass of: SO_0000673
so part of: CCDC115
location: join(27332..27357,27907..28303,29147..29241,29954..30046,30532..30661,30982..30987)
location: region:27332-30987:1
so has part: feature:27332-27357:1:exon
so has part: feature:27907-28303:1:exon
so has part: feature:29147-29241:1:exon
so has part: feature:29954-30046:1:exon
so has part: feature:30532-30661:1:exon
so has part: feature:30982-30987:1:exon

XP_052630993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27332-27357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27907-28303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29147-29241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29954-30046:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30532-30661:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30982-30987:1:exon

UBA1
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: UBA1
note: ubiquitin like modifier activating enzyme 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(32095..51939)
location: region:32095-51939:-1
so has part: feature:32095-51939:-1:exon
subclass of: SO_0000010

128135955
type: Gene
SIO_000068: ncbigene

position:32095:-1
position: 32095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51939:-1
position: 51939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32095-51939:-1:exon

UBA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: UBA1
product: ubiquitin like modifier activating enzyme 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
transcript id: XM_052775029.1
SIO_010081: UBA1
subclass of: SO_0000673
so part of: UBA1
location: complement(join(32095..32418,32733..32833,33098..33199,33725..33916,35187..35279,35362..35450,35863..36052,36988..37062,38123..38318,38537..38601,39062..39258,40584..40749,41667..41822,42601..42681,42963..43073,43157..43312,43759..43905,44443..44540,45284..45416,45514..45604,46250..46356,47734..47868,48893..49061,49745..49803,50693..50803,51838..51939))
location: region:32095-51939:-1
so has part: feature:51838-51939:-1:exon
so has part: feature:50693-50803:-1:exon
so has part: feature:49745-49803:-1:exon
so has part: feature:48893-49061:-1:exon
so has part: feature:47734-47868:-1:exon
so has part: feature:46250-46356:-1:exon
so has part: feature:45514-45604:-1:exon
so has part: feature:45284-45416:-1:exon
so has part: feature:44443-44540:-1:exon
so has part: feature:43759-43905:-1:exon
so has part: feature:43157-43312:-1:exon
so has part: feature:42963-43073:-1:exon
so has part: feature:42601-42681:-1:exon
so has part: feature:41667-41822:-1:exon
so has part: feature:40584-40749:-1:exon
so has part: feature:39062-39258:-1:exon
so has part: feature:38537-38601:-1:exon
so has part: feature:38123-38318:-1:exon
so has part: feature:36988-37062:-1:exon
so has part: feature:35863-36052:-1:exon
so has part: feature:35362-35450:-1:exon
so has part: feature:35187-35279:-1:exon
so has part: feature:33725-33916:-1:exon
so has part: feature:33098-33199:-1:exon
so has part: feature:32733-32833:-1:exon
so has part: feature:32095-32418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51838-51939:-1:exon

position:51838:-1
position: 51838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50693-50803:-1:exon

position:50693:-1
position: 50693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50803:-1
position: 50803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49745-49803:-1:exon

position:49745:-1
position: 49745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49803:-1
position: 49803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48893-49061:-1:exon

position:48893:-1
position: 48893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49061:-1
position: 49061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:47734-47868:-1:exon

position:47734:-1
position: 47734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47868:-1
position: 47868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:46250-46356:-1:exon

position:46250:-1
position: 46250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46356:-1
position: 46356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:45514-45604:-1:exon

position:45514:-1
position: 45514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45604:-1
position: 45604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:45284-45416:-1:exon

position:45284:-1
position: 45284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45416:-1
position: 45416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:44443-44540:-1:exon

position:44443:-1
position: 44443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44540:-1
position: 44540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:43759-43905:-1:exon

position:43759:-1
position: 43759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43905:-1
position: 43905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:43157-43312:-1:exon

position:43157:-1
position: 43157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43312:-1
position: 43312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:42963-43073:-1:exon

position:42963:-1
position: 42963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43073:-1
position: 43073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:42601-42681:-1:exon

position:42601:-1
position: 42601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42681:-1
position: 42681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:41667-41822:-1:exon

position:41667:-1
position: 41667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41822:-1
position: 41822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:40584-40749:-1:exon

position:40584:-1
position: 40584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40749:-1
position: 40749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:39062-39258:-1:exon

position:39062:-1
position: 39062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39258:-1
position: 39258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:38537-38601:-1:exon

position:38537:-1
position: 38537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38601:-1
position: 38601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:38123-38318:-1:exon

position:38123:-1
position: 38123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38318:-1
position: 38318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:36988-37062:-1:exon

position:36988:-1
position: 36988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37062:-1
position: 37062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:35863-36052:-1:exon

position:35863:-1
position: 35863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36052:-1
position: 36052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:35362-35450:-1:exon

position:35362:-1
position: 35362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35450:-1
position: 35450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:35187-35279:-1:exon

position:35187:-1
position: 35187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35279:-1
position: 35279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:33725-33916:-1:exon

position:33725:-1
position: 33725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33916:-1
position: 33916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:33098-33199:-1:exon

position:33098:-1
position: 33098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33199:-1
position: 33199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:32733-32833:-1:exon

position:32733:-1
position: 32733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32833:-1
position: 32833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:32095-32418:-1:exon

position:32418:-1
position: 32418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: UBA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-like modifier-activating enzyme 1
translation: MSSSPLSKKRRVSGSEPPTGSSRAPASAVPPSVTPANGMAKNGGEAEIDEGLYSRQLYVLGHEAMKRMQTSNVLVSGLRGLGVEVAKNLVLGGVKSVTLHDPQPAAWTDLASQFYLREEDVGQNRAEATLPRLAELNAYVAVTSTRQPLSQELLAPFQVVVLTNSSLEEQLWVGDFCHSHGIKLVVADTRGLFGQLFCDFGDDMVVTDTNGEQPLSAMVSMVTKGCPGEVTCLDEARHGFETGDFVTFTEVEGMEELNSCGPVEIRVLGPYTFSIGDTSGFGDYVRGGIVTQVKMPKHIRFKRLREALVEPELMITDFGKAERPPIMHWGWQALHRFIRQHGRPPRPRHQGDAAEVVALTREVAPGAELDEELLRELAFQATGDLAPVNAFIGGLAAQEVMKAVSGKFTPITQWLYFDALECLPEENKEMVLTEEQCCPRNSRYDGQIAVFGAELQAKLGAQKYFVVGAGAIGCELLKNFAMVGLGCGPEGCITVTDMDTIEKSNLNRQFLFRPWDVTKLKSERAAAAVREMNPALRVSSRPDRVGPDTERVYDDDFFEALDGVANALDNVDARLYMDRRCVYYRKPLLESGTLGTKGNVQVVIPFLSESYSSSQDPPEKAIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAENVNQYLTDPKFVERTLRLAGTQPLEVLEAVQRSLVSERPRAWPDCVAWACRHWHRQYSNNIRQLLHNFPPGQKTNSGTLFWSGPKRCPHPLVFDPDNPLHLDYVMAAANLFAQSYGIGGSRDRGAVAELLRHVRVPPFAPKAGVRIHVSDQELQSATAALDDGRLEELKASLPSPEELPGFRMFPIDFEKDDDTNFHMDFIVAASNLRAENYDIPPADRHKSKLIAGKIIPAIATTTGAVVGLACLELYKLVQGHRRLASYKNAFLNLALPFVGFSEPLACPRNKYYEVEWTLWDRFEVQGLQPDGQEMTLRQFLAYFKKEHRLEITMLSQGVSMLYSFFMPAAKLRERHDQPMTEIVARVSKKKVGRHVKALVFELCCNDDTDADIEVPYVRYTIR
SIO_010081: UBA1
subclass of: SO_0000673
so part of: UBA1
location: complement(join(32283..32418,32733..32833,33098..33199,33725..33916,35187..35279,35362..35450,35863..36052,36988..37062,38123..38318,38537..38601,39062..39258,40584..40749,41667..41822,42601..42681,42963..43073,43157..43312,43759..43905,44443..44540,45284..45416,45514..45604,46250..46356,47734..47868,48893..49061,49745..49803,50693..50803))
location: region:32283-50803:-1
so has part: feature:50693-50803:-1:exon
so has part: feature:49745-49803:-1:exon
so has part: feature:48893-49061:-1:exon
so has part: feature:47734-47868:-1:exon
so has part: feature:46250-46356:-1:exon
so has part: feature:45514-45604:-1:exon
so has part: feature:45284-45416:-1:exon
so has part: feature:44443-44540:-1:exon
so has part: feature:43759-43905:-1:exon
so has part: feature:43157-43312:-1:exon
so has part: feature:42963-43073:-1:exon
so has part: feature:42601-42681:-1:exon
so has part: feature:41667-41822:-1:exon
so has part: feature:40584-40749:-1:exon
so has part: feature:39062-39258:-1:exon
so has part: feature:38537-38601:-1:exon
so has part: feature:38123-38318:-1:exon
so has part: feature:36988-37062:-1:exon
so has part: feature:35863-36052:-1:exon
so has part: feature:35362-35450:-1:exon
so has part: feature:35187-35279:-1:exon
so has part: feature:33725-33916:-1:exon
so has part: feature:33098-33199:-1:exon
so has part: feature:32733-32833:-1:exon
so has part: feature:32283-32418:-1:exon

XP_052630989.1
type: Protein
SIO_000068: ncbiprotein

position:32283:-1
position: 32283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50693-50803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49745-49803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48893-49061:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47734-47868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46250-46356:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:45514-45604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:45284-45416:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44443-44540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43759-43905:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:43157-43312:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:42963-43073:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:42601-42681:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:41667-41822:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:40584-40749:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:39062-39258:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:38537-38601:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:38123-38318:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:36988-37062:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:35863-36052:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:35362-35450:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:35187-35279:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:33725-33916:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:33098-33199:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:32733-32833:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:32283-32418:-1:exon

NDUFB11
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: NDUFB11
note: NADH:ubiquinone oxidoreductase subunit B11; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(53724..56051)
location: region:53724-56051:-1
so has part: feature:53724-56051:-1:exon
subclass of: SO_0000010

128135959
type: Gene
SIO_000068: ncbigene

position:53724:-1
position: 53724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56051:-1
position: 56051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53724-56051:-1:exon

NDUFB11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: NDUFB11
product: NADH:ubiquinone oxidoreductase subunit B11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_052775035.1
SIO_010081: NDUFB11
subclass of: SO_0000673
so part of: NDUFB11
location: complement(join(53724..53872,55115..55245,55853..56051))
location: region:53724-56051:-1
so has part: feature:55853-56051:-1:exon
so has part: feature:55115-55245:-1:exon
so has part: feature:53724-53872:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55853-56051:-1:exon

position:55853:-1
position: 55853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:55115-55245:-1:exon

position:55115:-1
position: 55115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55245:-1
position: 55245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:53724-53872:-1:exon

position:53872:-1
position: 53872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDUFB11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: NDUFB11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial
translation: MAAAAVGRALRALRVRTMAAGTRGRSAGPPGAVALPQVPLGADPHEEEPMAVAQKKNPDYHGFSADPDADVLNMRAVFFAGVSVAIVLGTVFLHYLPDYGLQQWARREAELQIRERESRGMPLLDSNYYNPARLTLPPPE
SIO_010081: NDUFB11
subclass of: SO_0000673
so part of: NDUFB11
location: complement(join(53749..53872,55115..55245,55853..56020))
location: region:53749-56020:-1
so has part: feature:55853-56020:-1:exon
so has part: feature:55115-55245:-1:exon
so has part: feature:53749-53872:-1:exon

XP_052630995.1
type: Protein
SIO_000068: ncbiprotein

position:53749:-1
position: 53749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56020:-1
position: 56020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55853-56020:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55115-55245:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53749-53872:-1:exon

RBM10
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: RBM10
note: RNA binding motif protein 10; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 56474..79604
location: region:56474-79604:1
so has part: feature:56474-79604:1:exon
subclass of: SO_0000010

128135949
type: Gene
SIO_000068: ncbigene

position:56474:1
position: 56474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79604:1
position: 79604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56474-79604:1:exon

RBM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: RBM10
product: RNA binding motif protein 10
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_052775023.1
SIO_010081: RBM10
subclass of: SO_0000673
so part of: RBM10
location: join(56474..56548,57572..57599,57976..58191,58248..58434,59421..59490,61829..61902,65571..65657,66521..66581,67337..67492,67952..68112,68337..68434,69016..69115,69525..69723,69895..69932,70256..70399,70946..71042,71431..71522,72776..72943,74298..74444,75117..75182,75372..75560,76654..76722,76996..77100,77567..77682,79210..79604)
location: region:56474-79604:1
so has part: feature:56474-56548:1:exon
so has part: feature:57572-57599:1:exon
so has part: feature:57976-58191:1:exon
so has part: feature:58248-58434:1:exon
so has part: feature:59421-59490:1:exon
so has part: feature:61829-61902:1:exon
so has part: feature:65571-65657:1:exon
so has part: feature:66521-66581:1:exon
so has part: feature:67337-67492:1:exon
so has part: feature:67952-68112:1:exon
so has part: feature:68337-68434:1:exon
so has part: feature:69016-69115:1:exon
so has part: feature:69525-69723:1:exon
so has part: feature:69895-69932:1:exon
so has part: feature:70256-70399:1:exon
so has part: feature:70946-71042:1:exon
so has part: feature:71431-71522:1:exon
so has part: feature:72776-72943:1:exon
so has part: feature:74298-74444:1:exon
so has part: feature:75117-75182:1:exon
so has part: feature:75372-75560:1:exon
so has part: feature:76654-76722:1:exon
so has part: feature:76996-77100:1:exon
so has part: feature:77567-77682:1:exon
so has part: feature:79210-79604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56474-56548:1:exon

position:56548:1
position: 56548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57572-57599:1:exon

position:57572:1
position: 57572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57599:1
position: 57599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:57976-58191:1:exon

position:57976:1
position: 57976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58191:1
position: 58191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:58248-58434:1:exon

position:58248:1
position: 58248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58434:1
position: 58434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:59421-59490:1:exon

position:59421:1
position: 59421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59490:1
position: 59490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:61829-61902:1:exon

position:61829:1
position: 61829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61902:1
position: 61902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:65571-65657:1:exon

position:65571:1
position: 65571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65657:1
position: 65657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:66521-66581:1:exon

position:66521:1
position: 66521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66581:1
position: 66581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:67337-67492:1:exon

position:67337:1
position: 67337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67492:1
position: 67492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:67952-68112:1:exon

position:67952:1
position: 67952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68112:1
position: 68112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:68337-68434:1:exon

position:68337:1
position: 68337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68434:1
position: 68434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:69016-69115:1:exon

position:69016:1
position: 69016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69115:1
position: 69115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:69525-69723:1:exon

position:69525:1
position: 69525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69723:1
position: 69723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:69895-69932:1:exon

position:69895:1
position: 69895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69932:1
position: 69932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:70256-70399:1:exon

position:70256:1
position: 70256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70399:1
position: 70399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:70946-71042:1:exon

position:70946:1
position: 70946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71042:1
position: 71042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:71431-71522:1:exon

position:71431:1
position: 71431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71522:1
position: 71522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:72776-72943:1:exon

position:72776:1
position: 72776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72943:1
position: 72943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:74298-74444:1:exon

position:74298:1
position: 74298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74444:1
position: 74444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:75117-75182:1:exon

position:75117:1
position: 75117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75182:1
position: 75182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:75372-75560:1:exon

position:75372:1
position: 75372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75560:1
position: 75560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:76654-76722:1:exon

position:76654:1
position: 76654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76722:1
position: 76722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:76996-77100:1:exon

position:76996:1
position: 76996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77100:1
position: 77100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:77567-77682:1:exon

position:77567:1
position: 77567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77682:1
position: 77682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:79210-79604:1:exon

position:79210:1
position: 79210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: RBM10
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: RNA-binding protein 10
translation: MEYERRGGRGDRTGRYGGAPAPPEEGSRTQRDHDYRDMDYRGYGGPPEGPPAPGTPPQVGAGCRGPFLDTWITSRTPGPPTRARSPPGSGTPAPAPPTLPFGADGDYRDQDYRPEAAEEEPRASTIVMLRMLPQAATENDIRAQLQAQGVQPREVRLMRNKSSGQSRGFAFVEFNHVQDAARWMDANQQGLSLLGQRVSLHYSDPKPKINEDWLCAKCGVQNFKRREKCFKCGVPKAEAEQRGPGGPRPELVPGGGGLLPLPQPYGPTLGGAPSGTQGGTEPGADNANDTIILRNLHPQSSLDSILAALAPFAALSAANVRVIKDRQTQLNRGFAFVQLATIVEASQLLQMLQALHPPLHIDGKSINVEFAKGSKREVQGAGPGEGPPRASAASVASTAIAAAQWALSQAAPGGETTWAGGEEPPSDFSFYQSEETFAGPTPALYGSTYLKGAAAPPPGPTLSGPAPAKADGPAPEGTQAPEDSYRRDAQRNQQCRGWTLRREGAARSPAPPPGAPPYPSPTGETPTATPSGAPTQTYTGPLKAETPNPAPPGPPPAAPPSSESYGQYPVPDVSTYQYDETSGYYYDPLTGLYYDPHSQYYYDAGAGQYLYWDGERRTYLAAPPAEPPPGPPGTPGPPKEPKDKKEKHKTKTAQQIAKDMERWARSLNKQRESGRSAGPPPPPREDERREAAAADAGYAILEKKGALTERQHPPMELPKLTSDERLSPPRGLVAAYSGESESEEEGERGPDRPGEPLTDWHKLACLLCRRQFPSKEALLRHQQLSGLHKQNLELQRRSHPPPPEGLDRGDMEMKYRDRAAERREKQGGPDPPEPKRRKFGGPPPHPRGGGGSAPPQTTLGCRMLQAMGWKEGSGLGRRRTEVTRGSATPVWCFAQLEEEGGGGACADLLGDEPVPLADCCLNPTYGYKRHPHGHCHTCRSAPPTASPAHPRTHPLPKPCPSQPSPTQSPAHLQALPSQPHPFGKSPTQPGSYAHHKKPRPSQKATPVPIPKPCPCH
SIO_010081: RBM10
subclass of: SO_0000673
so part of: RBM10
location: join(57583..57599,57976..58191,58248..58434,59421..59490,61829..61902,65571..65657,66521..66581,67337..67492,67952..68112,68337..68434,69016..69115,69525..69723,69895..69932,70256..70399,70946..71042,71431..71522,72776..72943,74298..74444,75117..75182,75372..75560,76654..76722,76996..77100,77567..77682,79210..79604)
location: region:57583-79604:1
so has part: feature:57583-57599:1:exon
so has part: feature:57976-58191:1:exon
so has part: feature:58248-58434:1:exon
so has part: feature:59421-59490:1:exon
so has part: feature:61829-61902:1:exon
so has part: feature:65571-65657:1:exon
so has part: feature:66521-66581:1:exon
so has part: feature:67337-67492:1:exon
so has part: feature:67952-68112:1:exon
so has part: feature:68337-68434:1:exon
so has part: feature:69016-69115:1:exon
so has part: feature:69525-69723:1:exon
so has part: feature:69895-69932:1:exon
so has part: feature:70256-70399:1:exon
so has part: feature:70946-71042:1:exon
so has part: feature:71431-71522:1:exon
so has part: feature:72776-72943:1:exon
so has part: feature:74298-74444:1:exon
so has part: feature:75117-75182:1:exon
so has part: feature:75372-75560:1:exon
so has part: feature:76654-76722:1:exon
so has part: feature:76996-77100:1:exon
so has part: feature:77567-77682:1:exon
so has part: feature:79210-79604:1:exon

XP_052630983.1
type: Protein
SIO_000068: ncbiprotein

position:57583:1
position: 57583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57583-57599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57976-58191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58248-58434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59421-59490:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:61829-61902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65571-65657:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:66521-66581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67337-67492:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67952-68112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:68337-68434:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69016-69115:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69525-69723:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:69895-69932:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:70256-70399:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:70946-71042:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71431-71522:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72776-72943:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:74298-74444:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:75117-75182:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75372-75560:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:76654-76722:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:76996-77100:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:77567-77682:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:79210-79604:1:exon

CFP
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: CFP
note: complement factor properdin; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 78581..84824
location: region:78581-84824:1
so has part: feature:78581-84824:1:exon
subclass of: SO_0000010

128135964
type: Gene
SIO_000068: ncbigene

position:78581:1
position: 78581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84824:1
position: 84824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78581-84824:1:exon

CFP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: CFP
product: complement factor properdin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_052775040.1
SIO_010081: CFP
subclass of: SO_0000673
so part of: CFP
location: join(78581..78649,79210..79369,80564..80719,81106..81283,81589..81782,81906..82080,82705..82910,83387..83498,84309..84463,84789..84824)
location: region:78581-84824:1
so has part: feature:78581-78649:1:exon
so has part: feature:79210-79369:1:exon
so has part: feature:80564-80719:1:exon
so has part: feature:81106-81283:1:exon
so has part: feature:81589-81782:1:exon
so has part: feature:81906-82080:1:exon
so has part: feature:82705-82910:1:exon
so has part: feature:83387-83498:1:exon
so has part: feature:84309-84463:1:exon
so has part: feature:84789-84824:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78581-78649:1:exon

position:78649:1
position: 78649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79210-79369:1:exon

position:79369:1
position: 79369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80564-80719:1:exon

position:80564:1
position: 80564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80719:1
position: 80719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:81106-81283:1:exon

position:81106:1
position: 81106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81283:1
position: 81283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:81589-81782:1:exon

position:81589:1
position: 81589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81782:1
position: 81782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:81906-82080:1:exon

position:81906:1
position: 81906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82080:1
position: 82080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:82705-82910:1:exon

position:82705:1
position: 82705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82910:1
position: 82910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:83387-83498:1:exon

position:83387:1
position: 83387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83498:1
position: 83498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:84309-84463:1:exon

position:84309:1
position: 84309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84463:1
position: 84463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:84789-84824:1:exon

position:84789:1
position: 84789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CFP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: CFP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: properdin
translation: MGPVGQLWGGAARGRGQSRGGVEAVAVIRRRLRRTRPAPPAPATPSTPNPALPLPPCPVDGAWGAWSATAPCPVTCGLGAVTWRRACDAPPPQHGGRRCHGNSMRQGGLWTPRALPSCAALGPVGRLDPLRAAAVGHAELRAHRGAAEADAGECVGRKPGGPPCLTEGGVATIQIRACYNIHHCLLAGNWSDWSPWGLCTPPCGASPTRSRTRECQPIYPAYPLTVTPVGSSVPVNVTFWGSARPRCPPPGGGNSCAWRRVGHACTCCPAPPPEED
SIO_010081: CFP
subclass of: SO_0000673
so part of: CFP
location: join(81608..81782,81906..82080,82705..82910,83387..83498,84309..84463,84789..84796)
location: region:81608-84796:1
so has part: feature:81608-81782:1:exon
so has part: feature:81906-82080:1:exon
so has part: feature:82705-82910:1:exon
so has part: feature:83387-83498:1:exon
so has part: feature:84309-84463:1:exon
so has part: feature:84789-84796:1:exon

XP_052631000.1
type: Protein
SIO_000068: ncbiprotein

position:81608:1
position: 81608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84796:1
position: 84796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81608-81782:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:81906-82080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82705-82910:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83387-83498:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:84309-84463:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84789-84796:1:exon

SYN1
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: SYN1
note: synapsin I; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 86125..88053
location: region:86125-88053:1
so has part: feature:86125-88053:1:exon
subclass of: SO_0000010

128135950
type: Gene
SIO_000068: ncbigene

position:86125:1
position: 86125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88053:1
position: 88053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86125-88053:1:exon

SYN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: SYN1
product: synapsin I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_052775024.1
SIO_010081: SYN1
subclass of: SO_0000673
so part of: SYN1
location: join(86125..86308,86793..86850,87243..87325,87694..87852,88050..88053)
location: region:86125-88053:1
so has part: feature:86125-86308:1:exon
so has part: feature:86793-86850:1:exon
so has part: feature:87243-87325:1:exon
so has part: feature:87694-87852:1:exon
so has part: feature:88050-88053:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86125-86308:1:exon

position:86308:1
position: 86308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:86793-86850:1:exon

position:86793:1
position: 86793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86850:1
position: 86850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:87243-87325:1:exon

position:87243:1
position: 87243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87325:1
position: 87325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87694-87852:1:exon

position:87694:1
position: 87694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87852:1
position: 87852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:88050-88053:1:exon

position:88050:1
position: 88050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: SYN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synapsin-1
translation: MEYLRRRLSDGNFLAGGGGGPPRGGAGGGGGVLGGEGWGRPPRTPPQPPLLLVIAPPGTDWVKLFKGKSVHGDVELRVEQAQFSELSLVASTHGTLSVTIDTPRGGARRVRPDFVLVREPPPEGGVEGGRAAAAGGAAPGGGPQYRPPPRPVRLRSSPPAW
SIO_010081: SYN1
subclass of: SO_0000673
so part of: SYN1
location: join(86127..86308,86793..86850,87243..87325,87694..87852,88050..88053)
location: region:86127-88053:1
so has part: feature:86127-86308:1:exon
so has part: feature:86793-86850:1:exon
so has part: feature:87243-87325:1:exon
so has part: feature:87694-87852:1:exon
so has part: feature:88050-88053:1:exon

XP_052630984.1
type: Protein
SIO_000068: ncbiprotein

position:86127:1
position: 86127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86127-86308:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86793-86850:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87243-87325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87694-87852:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88050-88053:1:exon

LOC128135951
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128135951
note: proline-rich protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 88091..92462
location: region:88091-92462:1
so has part: feature:88091-92462:1:exon
subclass of: SO_0000010

128135951
type: Gene
SIO_000068: ncbigene

position:88091:1
position: 88091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92462:1
position: 92462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88091-92462:1:exon

LOC128135951
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LOC128135951
product: proline-rich protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_052775025.1
SIO_010081: LOC128135951
subclass of: SO_0000673
so part of: LOC128135951
location: join(88091..88343,88879..89055,89342..89446,89941..90012,90383..90487,90887..91025,91399..91463,91847..92112,92285..92462)
location: region:88091-92462:1
so has part: feature:88091-88343:1:exon
so has part: feature:88879-89055:1:exon
so has part: feature:89342-89446:1:exon
so has part: feature:89941-90012:1:exon
so has part: feature:90383-90487:1:exon
so has part: feature:90887-91025:1:exon
so has part: feature:91399-91463:1:exon
so has part: feature:91847-92112:1:exon
so has part: feature:92285-92462:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88091-88343:1:exon

position:88343:1
position: 88343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88879-89055:1:exon

position:88879:1
position: 88879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89055:1
position: 89055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:89342-89446:1:exon

position:89342:1
position: 89342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89446:1
position: 89446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:89941-90012:1:exon

position:89941:1
position: 89941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90012:1
position: 90012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:90383-90487:1:exon

position:90383:1
position: 90383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90487:1
position: 90487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:90887-91025:1:exon

position:90887:1
position: 90887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91025:1
position: 91025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:91399-91463:1:exon

position:91399:1
position: 91399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91463:1
position: 91463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:91847-92112:1:exon

position:91847:1
position: 91847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92112:1
position: 92112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:92285-92462:1:exon

position:92285:1
position: 92285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128135951
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LOC128135951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 2-like
translation: MVAVLGGTGRNRRILGGILGQTASAGQGCRTPLPLLRHSQCSQFAQLARLQRELGPEAFPLVPQRFCNRPRGLLTAPNLPHDGDAQPRPPQGVGKVRPRPFPDKPRPLPDCHQPGIGGGVASRGHSPWGRARVRVGTPEALGAVAGAMGGARAGALLQGVPGGGPAPVAAGGPGTPPGEGDPDGAGGPEPTAPVVGWMPAPASSGGVDICGVEALRGPDGREHIVQVLGSWMPLLGPGAARGSGPHCGTGVGPDEGGAAPPTEPLPCTATPTDAGDIRVPPAGDPPPSSDPHPRGLHRRLAPPSPAPHRKGSPGLWEVGVSPRPASPGPRPTARPCPASPSGPTAPPPDTTCCWAAPAHKPRPHPHSPAHKPPPTSSQPRPPVPALQAQPPLLKPALRLRPLPPQPRPQAPPTSPQPRLPGSPQPRSQAPPTATQPHPPAH
SIO_010081: LOC128135951
subclass of: SO_0000673
so part of: LOC128135951
location: join(88125..88343,88879..89055,89342..89446,89941..90012,90383..90487,90887..91025,91399..91463,91847..92112,92285..92462)
location: region:88125-92462:1
so has part: feature:88125-88343:1:exon
so has part: feature:88879-89055:1:exon
so has part: feature:89342-89446:1:exon
so has part: feature:89941-90012:1:exon
so has part: feature:90383-90487:1:exon
so has part: feature:90887-91025:1:exon
so has part: feature:91399-91463:1:exon
so has part: feature:91847-92112:1:exon
so has part: feature:92285-92462:1:exon

XP_052630985.1
type: Protein
SIO_000068: ncbiprotein

position:88125:1
position: 88125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88125-88343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88879-89055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89342-89446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89941-90012:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90383-90487:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90887-91025:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91399-91463:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:91847-92112:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92285-92462:1:exon

UXT
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: UXT
note: ubiquitously expressed prefoldin like chaperone; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 93400..97129
location: region:93400-97129:1
so has part: feature:93400-97129:1:exon
subclass of: SO_0000010

128135965
type: Gene
SIO_000068: ncbigene

position:93400:1
position: 93400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97129:1
position: 97129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93400-97129:1:exon

UXT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: UXT
product: ubiquitously expressed prefoldin like chaperone
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_052775041.1
SIO_010081: UXT
subclass of: SO_0000673
so part of: UXT
location: join(93400..93483,94147..94228,94633..94697,95773..95880,96687..96750,96879..97129)
location: region:93400-97129:1
so has part: feature:93400-93483:1:exon
so has part: feature:94147-94228:1:exon
so has part: feature:94633-94697:1:exon
so has part: feature:95773-95880:1:exon
so has part: feature:96687-96750:1:exon
so has part: feature:96879-97129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93400-93483:1:exon

position:93483:1
position: 93483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94147-94228:1:exon

position:94147:1
position: 94147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94228:1
position: 94228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94633-94697:1:exon

position:94633:1
position: 94633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94697:1
position: 94697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:95773-95880:1:exon

position:95773:1
position: 95773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95880:1
position: 95880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:96687-96750:1:exon

position:96687:1
position: 96687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96750:1
position: 96750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:96879-97129:1:exon

position:96879:1
position: 96879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UXT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: UXT
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein UXT
translation: MAAAGKAQRYEAFVSDVLQRDLRRVQEQRDGIFEQQAQVLQLRTALARLQEAPTPLRTQVDLGCNFFVTAEVPSPQRVFVALGYGFFAELTLPEALRHLDRRSRLLDRLSESLTRDGAKIRAHIRLVLEGLRELQGLQDPPTTSDP
SIO_010081: UXT
subclass of: SO_0000673
so part of: UXT
location: join(93415..93483,94147..94228,94633..94697,95773..95880,96687..96750,96879..96932)
location: region:93415-96932:1
so has part: feature:93415-93483:1:exon
so has part: feature:94147-94228:1:exon
so has part: feature:94633-94697:1:exon
so has part: feature:95773-95880:1:exon
so has part: feature:96687-96750:1:exon
so has part: feature:96879-96932:1:exon

XP_052631001.1
type: Protein
SIO_000068: ncbiprotein

position:93415:1
position: 93415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96932:1
position: 96932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93415-93483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94147-94228:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94633-94697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95773-95880:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96687-96750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96879-96932:1:exon

LOC128135952
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128135952
note: cyclin-dependent kinase 16-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 98994..105302
location: region:98994-105302:1
so has part: feature:98994-105302:1:exon
subclass of: SO_0000010

128135952
type: Gene
SIO_000068: ncbigene

position:98994:1
position: 98994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105302:1
position: 105302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98994-105302:1:exon

LOC128135952
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LOC128135952
product: cyclin-dependent kinase 16-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_052775026.1
SIO_010081: LOC128135952
subclass of: SO_0000673
so part of: LOC128135952
location: join(98994..99231,100809..100941,101508..101618,102087..102143,102612..102726,102960..103071,103423..103604,105285..105302)
location: region:98994-105302:1
so has part: feature:98994-99231:1:exon
so has part: feature:100809-100941:1:exon
so has part: feature:101508-101618:1:exon
so has part: feature:102087-102143:1:exon
so has part: feature:102612-102726:1:exon
so has part: feature:102960-103071:1:exon
so has part: feature:103423-103604:1:exon
so has part: feature:105285-105302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98994-99231:1:exon

position:99231:1
position: 99231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100809-100941:1:exon

position:100809:1
position: 100809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100941:1
position: 100941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:101508-101618:1:exon

position:101508:1
position: 101508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101618:1
position: 101618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:102087-102143:1:exon

position:102087:1
position: 102087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102143:1
position: 102143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:102612-102726:1:exon

position:102612:1
position: 102612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102726:1
position: 102726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:102960-103071:1:exon

position:102960:1
position: 102960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103071:1
position: 103071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:103423-103604:1:exon

position:103423:1
position: 103423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103604:1
position: 103604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:105285-105302:1:exon

position:105285:1
position: 105285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128135952
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LOC128135952
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cyclin-dependent kinase 16-like
translation: MDRMKKIKRQLSMTLRGGRAPEKSLGEPRDGHGSDSEAGAEEGRMGSDGESDPPXGTSSEEVASPVRLRLRQHPARPGSSEDINKRLSLPADTRLPEGGLDRLGLPGPLSRRLRRVSLSEIGFGKLETYVKLDKLGEGTYATVYKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLRDLKHANVVTLHDIVHTPQCLTLVFEYLVSDPKSPPNALWAPPNAPSTPLNPPRDPPNCPIFRVSSSPPSHFRTGDLKQYLDDCGSVISMHNVKENAKD
SIO_010081: LOC128135952
subclass of: SO_0000673
so part of: LOC128135952
location: join(99122..99231,100809..100941,101508..101618,102087..102143,102612..102726,102960..103071,103423..103604,105285..105302)
location: region:99122-105302:1
so has part: feature:99122-99231:1:exon
so has part: feature:100809-100941:1:exon
so has part: feature:101508-101618:1:exon
so has part: feature:102087-102143:1:exon
so has part: feature:102612-102726:1:exon
so has part: feature:102960-103071:1:exon
so has part: feature:103423-103604:1:exon
so has part: feature:105285-105302:1:exon

XP_052630986.1
type: Protein
SIO_000068: ncbiprotein

position:99122:1
position: 99122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99122-99231:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100809-100941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101508-101618:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102087-102143:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102612-102726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102960-103071:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103423-103604:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:105285-105302:1:exon

LOC128135971
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128135971
note: uncharacterized LOC128135971; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 106139..114676
location: region:106139-114676:1
so has part: feature:106139-114676:1:exon
subclass of: SO_0000010

128135971
type: Gene
SIO_000068: ncbigene

position:106139:1
position: 106139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114676:1
position: 114676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106139-114676:1:exon

LOC128135971
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LOC128135971
product: uncharacterized LOC128135971
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775053.1
SIO_010081: LOC128135971
subclass of: SO_0000673
so part of: LOC128135971
location: join(106139..106486,107110..107232,107918..108017,109321..109426,109856..109898,110289..110379,111041..111174,111795..111842,112420..114676)
location: region:106139-114676:1
so has part: feature:106139-106486:1:exon
so has part: feature:107110-107232:1:exon
so has part: feature:107918-108017:1:exon
so has part: feature:109321-109426:1:exon
so has part: feature:109856-109898:1:exon
so has part: feature:110289-110379:1:exon
so has part: feature:111041-111174:1:exon
so has part: feature:111795-111842:1:exon
so has part: feature:112420-114676:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106139-106486:1:exon

position:106486:1
position: 106486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107110-107232:1:exon

position:107110:1
position: 107110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107232:1
position: 107232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107918-108017:1:exon

position:107918:1
position: 107918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108017:1
position: 108017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:109321-109426:1:exon

position:109321:1
position: 109321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109426:1
position: 109426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:109856-109898:1:exon

position:109856:1
position: 109856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109898:1
position: 109898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:110289-110379:1:exon

position:110289:1
position: 110289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110379:1
position: 110379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:111041-111174:1:exon

position:111041:1
position: 111041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111174:1
position: 111174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:111795-111842:1:exon

position:111795:1
position: 111795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111842:1
position: 111842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:112420-114676:1:exon

position:112420:1
position: 112420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128135971
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LOC128135971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC128135971
translation: MRGACEGRAKGPMRSSAISKDAKALGLLRRATTTRGGRDHATGLAISIRRSVQRVCKGPFWGAAGWGGAAFSSSSCSGVWLSATGTRCCTATSSPKTSCSAGAGTSNSPTSAWPGQNPSRRRRTLNEVVTLWYRPPRHPAGLHRVLHPDRYVGRGLHLLRDGDGAVPLFPGSTVEEQLHFIFRLLGTPTEETWPGIGANAEFRAHKYPPYPPEGLLHHAPRLDHDGADLLGQLLQFEGRRRLPAAEAMAHPFFACLGPRVTTLPDTTSIFALKEIQLQKEPGLRSASLPPPWSAPPNLGTLPPNLGTPSQVPPPFGCSTLNSDAGQPMDCCCDPPPHLGHPKSVCVGLPQSWGRTL
SIO_010081: LOC128135971
subclass of: SO_0000673
so part of: LOC128135971
location: join(106154..106486,107110..107232,107918..108017,109321..109426,109856..109898,110289..110379,111041..111174,111795..111842,112420..112512)
location: region:106154-112512:1
so has part: feature:106154-106486:1:exon
so has part: feature:107110-107232:1:exon
so has part: feature:107918-108017:1:exon
so has part: feature:109321-109426:1:exon
so has part: feature:109856-109898:1:exon
so has part: feature:110289-110379:1:exon
so has part: feature:111041-111174:1:exon
so has part: feature:111795-111842:1:exon
so has part: feature:112420-112512:1:exon

XP_052631013.1
type: Protein
SIO_000068: ncbiprotein

position:106154:1
position: 106154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112512:1
position: 112512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106154-106486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107110-107232:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107918-108017:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109321-109426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109856-109898:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110289-110379:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111041-111174:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:111795-111842:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112420-112512:1:exon

LOC128135972
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128135972
note: RNA-binding protein 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 116146..121655
location: region:116146-121655:1
so has part: feature:116146-121655:1:exon
subclass of: SO_0000010

128135972
type: Gene
SIO_000068: ncbigene

position:116146:1
position: 116146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121655:1
position: 121655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116146-121655:1:exon

LOC128135972
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LOC128135972
product: RNA-binding protein 3-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon
transcript id: XM_052775055.1
SIO_010081: LOC128135972
subclass of: SO_0000673
so part of: LOC128135972
location: join(116146..116246,117789..117893,118622..118729,119288..119393,120072..120154,120531..120595,121452..121655)
location: region:116146-121655:1
so has part: feature:116146-116246:1:exon
so has part: feature:117789-117893:1:exon
so has part: feature:118622-118729:1:exon
so has part: feature:119288-119393:1:exon
so has part: feature:120072-120154:1:exon
so has part: feature:120531-120595:1:exon
so has part: feature:121452-121655:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116146-116246:1:exon

position:116246:1
position: 116246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117789-117893:1:exon

position:117789:1
position: 117789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117893:1
position: 117893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:118622-118729:1:exon

position:118622:1
position: 118622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118729:1
position: 118729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:119288-119393:1:exon

position:119288:1
position: 119288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119393:1
position: 119393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:120072-120154:1:exon

position:120072:1
position: 120072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120154:1
position: 120154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:120531-120595:1:exon

position:120531:1
position: 120531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120595:1
position: 120595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:121452-121655:1:exon

position:121452:1
position: 121452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128135972
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LOC128135972
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: RNA-binding protein 3-like
translation: MAAEEGKLFVGGLNFDTDEQGLEQHFSSFGPIAEVVVVKDRETQRSRGFGFVTFANPEHASDAMRAMNGESLDGRQIRVDHAGKSPRGARGGYGGGRARGRGYVRGGGDRGYGGRYEGRSGGXGYGGSRDYGGRNQGGYGERFPSASYRDNYDN
SIO_010081: LOC128135972
subclass of: SO_0000673
so part of: LOC128135972
location: join(117791..117893,118622..118729,119288..119393,120072..120154,120531..120594)
location: region:117791-120594:1
so has part: feature:117791-117893:1:exon
so has part: feature:118622-118729:1:exon
so has part: feature:119288-119393:1:exon
so has part: feature:120072-120154:1:exon
so has part: feature:120531-120594:1:exon

XP_052631015.1
type: Protein
SIO_000068: ncbiprotein

position:117791:1
position: 117791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120594:1
position: 120594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117791-117893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:118622-118729:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119288-119393:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120072-120154:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120531-120594:1:exon

LOC128135987
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128135987
note: uncharacterized LOC128135987; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 133707..134244
location: region:133707-134244:1
so has part: feature:133707-134244:1:exon
subclass of: SO_0000011

128135987
type: Gene
SIO_000068: ncbigene

position:133707:1
position: 133707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134244:1
position: 134244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133707-134244:1:exon

LOC128135987
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 202280
nc RNA class: lncRNA
gene: LOC128135987
product: uncharacterized LOC128135987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008233239.1
SIO_010081: LOC128135987
subclass of: SO_0000673
so part of: LOC128135987
location: join(133707..133764,133849..133889,133975..134021,134151..134244)
location: region:133707-134244:1
so has part: feature:133707-133764:1:exon
so has part: feature:133849-133889:1:exon
so has part: feature:133975-134021:1:exon
so has part: feature:134151-134244:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133707-133764:1:exon

position:133764:1
position: 133764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133849-133889:1:exon

position:133849:1
position: 133849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133889:1
position: 133889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:133975-134021:1:exon

position:133975:1
position: 133975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134021:1
position: 134021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:134151-134244:1:exon

position:134151:1
position: 134151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACADVL
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: ACADVL
note: acyl-CoA dehydrogenase very long chain; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 135097..140192
location: region:135097-140192:1
so has part: feature:135097-140192:1:exon
subclass of: SO_0000010

128135974
type: Gene
SIO_000068: ncbigene

position:135097:1
position: 135097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140192:1
position: 140192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135097-140192:1:exon

ACADVL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: ACADVL
product: acyl-CoA dehydrogenase very long chain
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775059.1
SIO_010081: ACADVL
subclass of: SO_0000673
so part of: ACADVL
location: join(135097..135241,135327..135399,135490..135575,135684..135818,136251..136395,136474..136603,136683..136808,136889..137087,137454..137558,137646..137732,137836..137898,138015..138116,138343..138440,138549..138621,138707..138779,139093..139165,139263..139338,139424..139595,139643..140192)
location: region:135097-140192:1
so has part: feature:135097-135241:1:exon
so has part: feature:135327-135399:1:exon
so has part: feature:135490-135575:1:exon
so has part: feature:135684-135818:1:exon
so has part: feature:136251-136395:1:exon
so has part: feature:136474-136603:1:exon
so has part: feature:136683-136808:1:exon
so has part: feature:136889-137087:1:exon
so has part: feature:137454-137558:1:exon
so has part: feature:137646-137732:1:exon
so has part: feature:137836-137898:1:exon
so has part: feature:138015-138116:1:exon
so has part: feature:138343-138440:1:exon
so has part: feature:138549-138621:1:exon
so has part: feature:138707-138779:1:exon
so has part: feature:139093-139165:1:exon
so has part: feature:139263-139338:1:exon
so has part: feature:139424-139595:1:exon
so has part: feature:139643-140192:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135097-135241:1:exon

position:135241:1
position: 135241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:135327-135399:1:exon

position:135327:1
position: 135327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135399:1
position: 135399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:135490-135575:1:exon

position:135490:1
position: 135490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135575:1
position: 135575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:135684-135818:1:exon

position:135684:1
position: 135684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135818:1
position: 135818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:136251-136395:1:exon

position:136251:1
position: 136251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136395:1
position: 136395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:136474-136603:1:exon

position:136474:1
position: 136474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136603:1
position: 136603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:136683-136808:1:exon

position:136683:1
position: 136683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136808:1
position: 136808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:136889-137087:1:exon

position:136889:1
position: 136889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137087:1
position: 137087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:137454-137558:1:exon

position:137454:1
position: 137454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137558:1
position: 137558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:137646-137732:1:exon

position:137646:1
position: 137646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137732:1
position: 137732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:137836-137898:1:exon

position:137836:1
position: 137836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137898:1
position: 137898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:138015-138116:1:exon

position:138015:1
position: 138015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138116:1
position: 138116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:138343-138440:1:exon

position:138343:1
position: 138343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138440:1
position: 138440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:138549-138621:1:exon

position:138549:1
position: 138549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138621:1
position: 138621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:138707-138779:1:exon

position:138707:1
position: 138707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138779:1
position: 138779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:139093-139165:1:exon

position:139093:1
position: 139093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139165:1
position: 139165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:139263-139338:1:exon

position:139263:1
position: 139263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139338:1
position: 139338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:139424-139595:1:exon

position:139424:1
position: 139424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139595:1
position: 139595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:139643-140192:1:exon

position:139643:1
position: 139643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACADVL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: ACADVL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: very long-chain specific acyl-CoA dehydrogenase, mitochondrial
translation: MFLGRLNTEQVFPYPSVLSEEQEQTLQELVGPVTRFLRCKEGILGEVNNPARNDELERVEDATMQGLKEMGAFGLQVPPEMGGLGLSNTQYARLVEIVGQHDLGVGITLGAHQSIGFKGLLLYGTPAQKKKYLPRLATGETVAAFCLTEPGSGSDAASIRTRAQPSPCGTFYTLDGSKIWISNGGLAEIFTVFAKTPLRDEGTGETKEKITAFIVERGFGGVTHGAPEKKMGIRASNTAEVHFEGVRVPAENVLGVPGGGFKVAMNILNNGRFGMAAAMAGTMRGVLAKAVEHAANRTQFGDKIHNFGAIQEKLARMALLQYVTESMAYMISANMDQGATDFQIEAAISKIFGSEAAWTVTDECIQVMGGMGFMQESGVERVLRDLRIFRIFEGTNDILRLFVALNGFQTLGVQLRGLQKALKNPLGNVGVLAGEVTRRLRRKAGLGSGLSLQDHVHPDLQESAQKTLQCLELFAETADALLLKHGKKIVDEQFVLKRVADSAIDIYAMAVVLSRASRSLATEHPTAQHERLLCDTWCQEAHQRVLATLRPLPTENFRNLRVIARAVVESGGVVGPTPLGF
SIO_010081: ACADVL
subclass of: SO_0000673
so part of: ACADVL
location: join(135351..135399,135490..135575,135684..135818,136251..136395,136474..136603,136683..136808,136889..137087,137454..137558,137646..137732,137836..137898,138015..138116,138343..138440,138549..138621,138707..138779,139093..139165,139263..139338,139424..139549)
location: region:135351-139549:1
so has part: feature:135351-135399:1:exon
so has part: feature:135490-135575:1:exon
so has part: feature:135684-135818:1:exon
so has part: feature:136251-136395:1:exon
so has part: feature:136474-136603:1:exon
so has part: feature:136683-136808:1:exon
so has part: feature:136889-137087:1:exon
so has part: feature:137454-137558:1:exon
so has part: feature:137646-137732:1:exon
so has part: feature:137836-137898:1:exon
so has part: feature:138015-138116:1:exon
so has part: feature:138343-138440:1:exon
so has part: feature:138549-138621:1:exon
so has part: feature:138707-138779:1:exon
so has part: feature:139093-139165:1:exon
so has part: feature:139263-139338:1:exon
so has part: feature:139424-139549:1:exon

XP_052631019.1
type: Protein
SIO_000068: ncbiprotein

position:135351:1
position: 135351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139549:1
position: 139549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135351-135399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135490-135575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135684-135818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136251-136395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136474-136603:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136683-136808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:136889-137087:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:137454-137558:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:137646-137732:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:137836-137898:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:138015-138116:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138343-138440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:138549-138621:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:138707-138779:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:139093-139165:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:139263-139338:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:139424-139549:1:exon

DLG4
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: DLG4
note: discs large MAGUK scaffold protein 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 140268..156823
location: region:140268-156823:1
so has part: feature:140268-156823:1:exon
subclass of: SO_0000010

128135973
type: Gene
SIO_000068: ncbigene

position:140268:1
position: 140268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156823:1
position: 156823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140268-156823:1:exon

DLG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: DLG4
product: discs large MAGUK scaffold protein 4, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775058.1
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(140268..140351,140924..141033,141311..141372,145915..145980,148126..148179,148267..148317,148863..148987,149417..149586,150197..150333,150791..150935,151194..151332,151816..151972,152313..152415,152498..152612,152713..152889,153276..153312,153484..153511,153841..153888,153994..154095,154455..154627,154909..155018,155661..155752,156152..156823)
location: region:140268-156823:1
so has part: feature:140268-140351:1:exon
so has part: feature:140924-141033:1:exon
so has part: feature:141311-141372:1:exon
so has part: feature:145915-145980:1:exon
so has part: feature:148126-148179:1:exon
so has part: feature:148267-148317:1:exon
so has part: feature:148863-148987:1:exon
so has part: feature:149417-149586:1:exon
so has part: feature:150197-150333:1:exon
so has part: feature:150791-150935:1:exon
so has part: feature:151194-151332:1:exon
so has part: feature:151816-151972:1:exon
so has part: feature:152313-152415:1:exon
so has part: feature:152498-152612:1:exon
so has part: feature:152713-152889:1:exon
so has part: feature:153276-153312:1:exon
so has part: feature:153484-153511:1:exon
so has part: feature:153841-153888:1:exon
so has part: feature:153994-154095:1:exon
so has part: feature:154455-154627:1:exon
so has part: feature:154909-155018:1:exon
so has part: feature:155661-155752:1:exon
so has part: feature:156152-156823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140268-140351:1:exon

position:140351:1
position: 140351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140924-141033:1:exon

position:140924:1
position: 140924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141033:1
position: 141033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:141311-141372:1:exon

position:141311:1
position: 141311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141372:1
position: 141372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:145915-145980:1:exon

position:145915:1
position: 145915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145980:1
position: 145980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:148126-148179:1:exon

position:148126:1
position: 148126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148179:1
position: 148179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:148267-148317:1:exon

position:148267:1
position: 148267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148317:1
position: 148317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:148863-148987:1:exon

position:148863:1
position: 148863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148987:1
position: 148987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:149417-149586:1:exon

position:149417:1
position: 149417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149586:1
position: 149586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:150197-150333:1:exon

position:150197:1
position: 150197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150333:1
position: 150333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:150791-150935:1:exon

position:150791:1
position: 150791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150935:1
position: 150935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:151194-151332:1:exon

position:151194:1
position: 151194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151332:1
position: 151332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:151816-151972:1:exon

position:151816:1
position: 151816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151972:1
position: 151972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:152313-152415:1:exon

position:152313:1
position: 152313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152415:1
position: 152415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:152498-152612:1:exon

position:152498:1
position: 152498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152612:1
position: 152612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:152713-152889:1:exon

position:152713:1
position: 152713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152889:1
position: 152889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:153276-153312:1:exon

position:153276:1
position: 153276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153312:1
position: 153312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:153484-153511:1:exon

position:153484:1
position: 153484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153511:1
position: 153511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:153841-153888:1:exon

position:153841:1
position: 153841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153888:1
position: 153888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:153994-154095:1:exon

position:153994:1
position: 153994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154095:1
position: 154095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:154455-154627:1:exon

position:154455:1
position: 154455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154627:1
position: 154627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:154909-155018:1:exon

position:154909:1
position: 154909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155018:1
position: 155018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:155661-155752:1:exon

position:155661:1
position: 155661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155752:1
position: 155752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:156152-156823:1:exon

position:156152:1
position: 156152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DLG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: DLG4
product: discs large MAGUK scaffold protein 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775057.1
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(142348..142462,145915..145980,148126..148179,148267..148317,148863..148987,149417..149586,150197..150333,150791..150935,151194..151332,151816..151972,152313..152415,152498..152612,152713..152889,153276..153312,153484..153511,153841..153888,153994..154095,154455..154627,154909..155018,155661..155752,156152..156823)
location: region:142348-156823:1
so has part: feature:142348-142462:1:exon
so has part: feature:145915-145980:1:exon
so has part: feature:148126-148179:1:exon
so has part: feature:148267-148317:1:exon
so has part: feature:148863-148987:1:exon
so has part: feature:149417-149586:1:exon
so has part: feature:150197-150333:1:exon
so has part: feature:150791-150935:1:exon
so has part: feature:151194-151332:1:exon
so has part: feature:151816-151972:1:exon
so has part: feature:152313-152415:1:exon
so has part: feature:152498-152612:1:exon
so has part: feature:152713-152889:1:exon
so has part: feature:153276-153312:1:exon
so has part: feature:153484-153511:1:exon
so has part: feature:153841-153888:1:exon
so has part: feature:153994-154095:1:exon
so has part: feature:154455-154627:1:exon
so has part: feature:154909-155018:1:exon
so has part: feature:155661-155752:1:exon
so has part: feature:156152-156823:1:exon

position:142348:1
position: 142348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142348-142462:1:exon

position:142462:1
position: 142462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145915-145980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148126-148179:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148267-148317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148863-148987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149417-149586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:150197-150333:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:150791-150935:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:151194-151332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:151816-151972:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152313-152415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:152498-152612:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:152713-152889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:153276-153312:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:153484-153511:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:153841-153888:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:153994-154095:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:154455-154627:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:154909-155018:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:155661-155752:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:156152-156823:1:exon

DLG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: DLG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 4 isoform X2
translation: MDCLCIVTTKKYRYQDEDSPPLEQSPAHLPSQANSPPVIVNTDTLEAPAYVNGTEGEMEYEEITLERGNSGLGFSIAGGTDNPHVGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEADVREVTHSAAVEALKEAGAVVRLYVMRRKALAEKVVEVKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKVIEGGAAHKDGRLQIGDKILAVNNVSLEDVMHEDAVAALKNTYDVVYLRVAKPAATFLGDAFAPPDVTSSYSAHLDADLGPQSYLGPEFPPAMTPTSPRRYSPGPKDLLAEDDVPREPRRIMIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRSATHEQAAVALKNAGQTVTIIAQYKPEEYSRFEAKIHDLREQLLSSSLGSGSASLRSDPKRGFYVRALFDYDKAKDCGFLSQALSFRFGDVLHVLDASDEEWWQARHVLPPGQPPDIGFVPSKRRVERREWTRLKAKDRVPGSGSQGREDAVLSYETVTQMEVHYARPIIILGPTKDRVNDDLLSEFPDKFGSCVPHTTRPKREYEVDGRDYHFVASRERMEKDIQGHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAQLHPIAIFIRPKSLENVLEISKRVTEEQARKAFDRATKLEQEFTECFSAMVEGDSFEEIYHKVKRVIEELSGPYIWVPARERL
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(142433..142462,145915..145980,148126..148179,148267..148317,148863..148987,149417..149586,150197..150333,150791..150935,151194..151332,151816..151972,152313..152415,152498..152612,152713..152889,153276..153312,153484..153511,153841..153888,153994..154095,154455..154627,154909..155018,155661..155752,156152..156258)
location: region:142433-156258:1
so has part: feature:142433-142462:1:exon
so has part: feature:145915-145980:1:exon
so has part: feature:148126-148179:1:exon
so has part: feature:148267-148317:1:exon
so has part: feature:148863-148987:1:exon
so has part: feature:149417-149586:1:exon
so has part: feature:150197-150333:1:exon
so has part: feature:150791-150935:1:exon
so has part: feature:151194-151332:1:exon
so has part: feature:151816-151972:1:exon
so has part: feature:152313-152415:1:exon
so has part: feature:152498-152612:1:exon
so has part: feature:152713-152889:1:exon
so has part: feature:153276-153312:1:exon
so has part: feature:153484-153511:1:exon
so has part: feature:153841-153888:1:exon
so has part: feature:153994-154095:1:exon
so has part: feature:154455-154627:1:exon
so has part: feature:154909-155018:1:exon
so has part: feature:155661-155752:1:exon
so has part: feature:156152-156258:1:exon

XP_052631017.1
type: Protein
SIO_000068: ncbiprotein

position:142433:1
position: 142433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156258:1
position: 156258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142433-142462:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145915-145980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148126-148179:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148267-148317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148863-148987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149417-149586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:150197-150333:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:150791-150935:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:151194-151332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:151816-151972:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152313-152415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:152498-152612:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:152713-152889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:153276-153312:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:153484-153511:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:153841-153888:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:153994-154095:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:154455-154627:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:154909-155018:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:155661-155752:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:156152-156258:1:exon

DLG4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 202280
gene: DLG4
product: discs large MAGUK scaffold protein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XR_008233235.1
SIO_010081: DLG4
so part of: DLG4
location: join(144313..144531,145915..145980,148126..148179,148267..148317,148863..148987,149417..149586,150197..150333,150791..150935,151194..151332,151816..151972,152313..152415,152498..152612,152713..152889,153276..153312,153841..153888,153994..154095,154455..154574)
location: region:144313-154574:1
so has part: feature:144313-144531:1:exon
so has part: feature:145915-145980:1:exon
so has part: feature:148126-148179:1:exon
so has part: feature:148267-148317:1:exon
so has part: feature:148863-148987:1:exon
so has part: feature:149417-149586:1:exon
so has part: feature:150197-150333:1:exon
so has part: feature:150791-150935:1:exon
so has part: feature:151194-151332:1:exon
so has part: feature:151816-151972:1:exon
so has part: feature:152313-152415:1:exon
so has part: feature:152498-152612:1:exon
so has part: feature:152713-152889:1:exon
so has part: feature:153276-153312:1:exon
so has part: feature:153841-153888:1:exon
so has part: feature:153994-154095:1:exon
so has part: feature:154455-154574:1:exon

position:144313:1
position: 144313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154574:1
position: 154574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144313-144531:1:exon

position:144531:1
position: 144531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145915-145980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148126-148179:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148267-148317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148863-148987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149417-149586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:150197-150333:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:150791-150935:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:151194-151332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:151816-151972:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152313-152415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:152498-152612:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:152713-152889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:153276-153312:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:153841-153888:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:153994-154095:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:154455-154574:1:exon

DLG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: DLG4
product: discs large MAGUK scaffold protein 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775056.1
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(144322..144531,145915..145980,148126..148179,148267..148317,148863..148987,149417..149586,150197..150333,150791..150935,151194..151332,151816..151972,152313..152415,152498..152612,152713..152889,153276..153312,153484..153511,153841..153888,153994..154095,154455..154627,154909..155018,155661..155752,156152..156823)
location: region:144322-156823:1
so has part: feature:144322-144531:1:exon
so has part: feature:145915-145980:1:exon
so has part: feature:148126-148179:1:exon
so has part: feature:148267-148317:1:exon
so has part: feature:148863-148987:1:exon
so has part: feature:149417-149586:1:exon
so has part: feature:150197-150333:1:exon
so has part: feature:150791-150935:1:exon
so has part: feature:151194-151332:1:exon
so has part: feature:151816-151972:1:exon
so has part: feature:152313-152415:1:exon
so has part: feature:152498-152612:1:exon
so has part: feature:152713-152889:1:exon
so has part: feature:153276-153312:1:exon
so has part: feature:153484-153511:1:exon
so has part: feature:153841-153888:1:exon
so has part: feature:153994-154095:1:exon
so has part: feature:154455-154627:1:exon
so has part: feature:154909-155018:1:exon
so has part: feature:155661-155752:1:exon
so has part: feature:156152-156823:1:exon

position:144322:1
position: 144322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144322-144531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145915-145980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148126-148179:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148267-148317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148863-148987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149417-149586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:150197-150333:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:150791-150935:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:151194-151332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:151816-151972:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152313-152415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:152498-152612:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:152713-152889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:153276-153312:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:153484-153511:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:153841-153888:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:153994-154095:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:154455-154627:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:154909-155018:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:155661-155752:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:156152-156823:1:exon

DLG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: DLG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 4 isoform X1
translation: MEAAGGPGWRARARAGAGRGGAAGPLRPPGCFSPLLCQCRVVWRDRSLSLAFGCKKYRYQDEDSPPLEQSPAHLPSQANSPPVIVNTDTLEAPAYVNGTEGEMEYEEITLERGNSGLGFSIAGGTDNPHVGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEADVREVTHSAAVEALKEAGAVVRLYVMRRKALAEKVVEVKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKVIEGGAAHKDGRLQIGDKILAVNNVSLEDVMHEDAVAALKNTYDVVYLRVAKPAATFLGDAFAPPDVTSSYSAHLDADLGPQSYLGPEFPPAMTPTSPRRYSPGPKDLLAEDDVPREPRRIMIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRSATHEQAAVALKNAGQTVTIIAQYKPEEYSRFEAKIHDLREQLLSSSLGSGSASLRSDPKRGFYVRALFDYDKAKDCGFLSQALSFRFGDVLHVLDASDEEWWQARHVLPPGQPPDIGFVPSKRRVERREWTRLKAKDRVPGSGSQGREDAVLSYETVTQMEVHYARPIIILGPTKDRVNDDLLSEFPDKFGSCVPHTTRPKREYEVDGRDYHFVASRERMEKDIQGHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAQLHPIAIFIRPKSLENVLEISKRVTEEQARKAFDRATKLEQEFTECFSAMVEGDSFEEIYHKVKRVIEELSGPYIWVPARERL
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(144367..144531,145915..145980,148126..148179,148267..148317,148863..148987,149417..149586,150197..150333,150791..150935,151194..151332,151816..151972,152313..152415,152498..152612,152713..152889,153276..153312,153484..153511,153841..153888,153994..154095,154455..154627,154909..155018,155661..155752,156152..156258)
location: region:144367-156258:1
so has part: feature:144367-144531:1:exon
so has part: feature:145915-145980:1:exon
so has part: feature:148126-148179:1:exon
so has part: feature:148267-148317:1:exon
so has part: feature:148863-148987:1:exon
so has part: feature:149417-149586:1:exon
so has part: feature:150197-150333:1:exon
so has part: feature:150791-150935:1:exon
so has part: feature:151194-151332:1:exon
so has part: feature:151816-151972:1:exon
so has part: feature:152313-152415:1:exon
so has part: feature:152498-152612:1:exon
so has part: feature:152713-152889:1:exon
so has part: feature:153276-153312:1:exon
so has part: feature:153484-153511:1:exon
so has part: feature:153841-153888:1:exon
so has part: feature:153994-154095:1:exon
so has part: feature:154455-154627:1:exon
so has part: feature:154909-155018:1:exon
so has part: feature:155661-155752:1:exon
so has part: feature:156152-156258:1:exon

XP_052631016.1
type: Protein
SIO_000068: ncbiprotein

position:144367:1
position: 144367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144367-144531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145915-145980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148126-148179:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148267-148317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148863-148987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149417-149586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:150197-150333:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:150791-150935:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:151194-151332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:151816-151972:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152313-152415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:152498-152612:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:152713-152889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:153276-153312:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:153484-153511:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:153841-153888:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:153994-154095:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:154455-154627:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:154909-155018:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:155661-155752:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:156152-156258:1:exon

DLG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: DLG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 4 isoform X3
translation: MEYEEITLERGNSGLGFSIAGGTDNPHVGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEADVREVTHSAAVEALKEAGAVVRLYVMRRKALAEKVVEVKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKVIEGGAAHKDGRLQIGDKILAVNNVSLEDVMHEDAVAALKNTYDVVYLRVAKPAATFLGDAFAPPDVTSSYSAHLDADLGPQSYLGPEFPPAMTPTSPRRYSPGPKDLLAEDDVPREPRRIMIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRSATHEQAAVALKNAGQTVTIIAQYKPEEYSRFEAKIHDLREQLLSSSLGSGSASLRSDPKRGFYVRALFDYDKAKDCGFLSQALSFRFGDVLHVLDASDEEWWQARHVLPPGQPPDIGFVPSKRRVERREWTRLKAKDRVPGSGSQGREDAVLSYETVTQMEVHYARPIIILGPTKDRVNDDLLSEFPDKFGSCVPHTTRPKREYEVDGRDYHFVASRERMEKDIQGHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAQLHPIAIFIRPKSLENVLEISKRVTEEQARKAFDRATKLEQEFTECFSAMVEGDSFEEIYHKVKRVIEELSGPYIWVPARERL
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(148288..148317,148863..148987,149417..149586,150197..150333,150791..150935,151194..151332,151816..151972,152313..152415,152498..152612,152713..152889,153276..153312,153484..153511,153841..153888,153994..154095,154455..154627,154909..155018,155661..155752,156152..156258)
location: region:148288-156258:1
so has part: feature:148288-148317:1:exon
so has part: feature:148863-148987:1:exon
so has part: feature:149417-149586:1:exon
so has part: feature:150197-150333:1:exon
so has part: feature:150791-150935:1:exon
so has part: feature:151194-151332:1:exon
so has part: feature:151816-151972:1:exon
so has part: feature:152313-152415:1:exon
so has part: feature:152498-152612:1:exon
so has part: feature:152713-152889:1:exon
so has part: feature:153276-153312:1:exon
so has part: feature:153484-153511:1:exon
so has part: feature:153841-153888:1:exon
so has part: feature:153994-154095:1:exon
so has part: feature:154455-154627:1:exon
so has part: feature:154909-155018:1:exon
so has part: feature:155661-155752:1:exon
so has part: feature:156152-156258:1:exon

XP_052631018.1
type: Protein
SIO_000068: ncbiprotein

position:148288:1
position: 148288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148288-148317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148863-148987:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:149417-149586:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150197-150333:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150791-150935:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151194-151332:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151816-151972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152313-152415:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:152498-152612:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152713-152889:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:153276-153312:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153484-153511:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:153841-153888:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:153994-154095:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:154455-154627:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:154909-155018:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:155661-155752:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:156152-156258:1:exon

MPDU1
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: MPDU1
note: mannose-P-dolichol utilization defect 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(157427..159493)
location: region:157427-159493:-1
so has part: feature:157427-159493:-1:exon
subclass of: SO_0000010

128135963
type: Gene
SIO_000068: ncbigene

position:157427:-1
position: 157427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159493:-1
position: 159493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157427-159493:-1:exon

MPDU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: MPDU1
product: mannose-P-dolichol utilization defect 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_052775039.1
SIO_010081: MPDU1
subclass of: SO_0000673
so part of: MPDU1
location: complement(join(157427..157566,157648..157759,157939..158057,158157..158242,158344..158476,158928..158993,159247..159493))
location: region:157427-159493:-1
so has part: feature:159247-159493:-1:exon
so has part: feature:158928-158993:-1:exon
so has part: feature:158344-158476:-1:exon
so has part: feature:158157-158242:-1:exon
so has part: feature:157939-158057:-1:exon
so has part: feature:157648-157759:-1:exon
so has part: feature:157427-157566:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159247-159493:-1:exon

position:159247:-1
position: 159247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158928-158993:-1:exon

position:158928:-1
position: 158928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158993:-1
position: 158993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:158344-158476:-1:exon

position:158344:-1
position: 158344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158476:-1
position: 158476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:158157-158242:-1:exon

position:158157:-1
position: 158157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158242:-1
position: 158242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:157939-158057:-1:exon

position:157939:-1
position: 157939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158057:-1
position: 158057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:157648-157759:-1:exon

position:157648:-1
position: 157648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157759:-1
position: 157759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:157427-157566:-1:exon

position:157566:-1
position: 157566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MPDU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: MPDU1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: mannose-P-dolichol utilization defect 1 protein
translation: MGAPGWGRRRRSAGDKGTGQWLLGAGQSPRRAAHAPGLPHPEKRRRPAMEALRGWLVPLLLPERCFDELFLRLHLLHVPCLKILLSKALGYAIVAGSVMVKLPQVLKVVGARSGAGLSVPAVLLELLALGGTVAYGCARAFPFSAWGEALFLLLQTLTIGFLIQHFGGHTGRGLLFVAGYGVLLGALLSPHAPPGLATLLQAANLPIIILSRLLQAATNYRQGHTGQLSGVSTTLLWGGALARVFTSLQETGDVLLALTFVASAACNGLLLAQLLYYRGASAPHPKGD
SIO_010081: MPDU1
subclass of: SO_0000673
so part of: MPDU1
location: complement(join(157447..157566,157648..157759,157939..158057,158157..158242,158344..158476,158928..158993,159247..159478))
location: region:157447-159478:-1
so has part: feature:159247-159478:-1:exon
so has part: feature:158928-158993:-1:exon
so has part: feature:158344-158476:-1:exon
so has part: feature:158157-158242:-1:exon
so has part: feature:157939-158057:-1:exon
so has part: feature:157648-157759:-1:exon
so has part: feature:157447-157566:-1:exon

XP_052630999.1
type: Protein
SIO_000068: ncbiprotein

position:157447:-1
position: 157447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159478:-1
position: 159478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159247-159478:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158928-158993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158344-158476:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158157-158242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157939-158057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157648-157759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:157447-157566:-1:exon

LOC128135953
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128135953
note: eukaryotic initiation factor 4A-I-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(161538..166295)
location: region:161538-166295:-1
so has part: feature:161538-166295:-1:exon
subclass of: SO_0000010

128135953
type: Gene
SIO_000068: ncbigene

position:161538:-1
position: 161538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166295:-1
position: 166295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161538-166295:-1:exon

LOC128135953
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LOC128135953
product: eukaryotic initiation factor 4A-I-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins
transcript id: XM_052775027.1
SIO_010081: LOC128135953
subclass of: SO_0000673
so part of: LOC128135953
location: complement(join(161538..161743,161987..162066,162165..162254,162349..162486,162832..162975,163638..163747,164521..164689,165662..165764,166275..166295))
location: region:161538-166295:-1
so has part: feature:166275-166295:-1:exon
so has part: feature:165662-165764:-1:exon
so has part: feature:164521-164689:-1:exon
so has part: feature:163638-163747:-1:exon
so has part: feature:162832-162975:-1:exon
so has part: feature:162349-162486:-1:exon
so has part: feature:162165-162254:-1:exon
so has part: feature:161987-162066:-1:exon
so has part: feature:161538-161743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:166275-166295:-1:exon

position:166275:-1
position: 166275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:165662-165764:-1:exon

position:165662:-1
position: 165662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165764:-1
position: 165764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:164521-164689:-1:exon

position:164521:-1
position: 164521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164689:-1
position: 164689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:163638-163747:-1:exon

position:163638:-1
position: 163638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163747:-1
position: 163747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:162832-162975:-1:exon

position:162832:-1
position: 162832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162975:-1
position: 162975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:162349-162486:-1:exon

position:162349:-1
position: 162349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162486:-1
position: 162486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:162165-162254:-1:exon

position:162165:-1
position: 162165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162254:-1
position: 162254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:161987-162066:-1:exon

position:161987:-1
position: 161987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162066:-1
position: 162066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:161538-161743:-1:exon

position:161743:-1
position: 161743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128135953
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LOC128135953
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: eukaryotic initiation factor 4A-I-like
translation: MGWWCVPTATFAISILQQIELDLKATQALVLAPHPRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQLEAPHIIVGTPGRVFDMLNRRYLSPKFIKMFVLDEADEMLSRGFKDQIYDIFQKLSGNTQVVLLSATMPLDVLEVTKKFMREPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTAIEEMPLNVADLI
SIO_010081: LOC128135953
subclass of: SO_0000673
so part of: LOC128135953
location: complement(join(161598..161743,161987..162066,162165..162254,162349..162486,162832..162975,163638..163747,164521..164689,165662..165764,166275..166295))
location: region:161598-166295:-1
so has part: feature:166275-166295:-1:exon
so has part: feature:165662-165764:-1:exon
so has part: feature:164521-164689:-1:exon
so has part: feature:163638-163747:-1:exon
so has part: feature:162832-162975:-1:exon
so has part: feature:162349-162486:-1:exon
so has part: feature:162165-162254:-1:exon
so has part: feature:161987-162066:-1:exon
so has part: feature:161598-161743:-1:exon

XP_052630987.1
type: Protein
SIO_000068: ncbiprotein

position:161598:-1
position: 161598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166275-166295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:165662-165764:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164521-164689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:163638-163747:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162832-162975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162349-162486:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162165-162254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:161987-162066:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:161598-161743:-1:exon

GABARAP
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: GABARAP
note: GABA type A receptor-associated protein; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(167688..168997)
location: region:167688-168997:-1
so has part: feature:167688-168997:-1:exon
subclass of: SO_0000010

128135962
type: Gene
SIO_000068: ncbigene

position:167688:-1
position: 167688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168997:-1
position: 168997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167688-168997:-1:exon

GABARAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: GABARAP
product: GABA type A receptor-associated protein
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
transcript id: XM_052775038.1
SIO_010081: GABARAP
subclass of: SO_0000673
so part of: GABARAP
location: complement(join(167688..167838,168049..168166,168260..168338,168766..168997))
location: region:167688-168997:-1
so has part: feature:168766-168997:-1:exon
so has part: feature:168260-168338:-1:exon
so has part: feature:168049-168166:-1:exon
so has part: feature:167688-167838:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:168766-168997:-1:exon

position:168766:-1
position: 168766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:168260-168338:-1:exon

position:168260:-1
position: 168260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168338:-1
position: 168338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:168049-168166:-1:exon

position:168049:-1
position: 168049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168166:-1
position: 168166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:167688-167838:-1:exon

position:167838:-1
position: 167838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GABARAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: GABARAP
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor-associated protein
translation: MKFLYKEEHPFEKRRCEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPXTSATMGQLYQEHHEEDFFLYIAYSDESVYGA
SIO_010081: GABARAP
subclass of: SO_0000673
so part of: GABARAP
location: complement(join(167773..167838,168049..168166,168260..168338,168766..168855))
location: region:167773-168855:-1
so has part: feature:168766-168855:-1:exon
so has part: feature:168260-168338:-1:exon
so has part: feature:168049-168166:-1:exon
so has part: feature:167773-167838:-1:exon

XP_052630998.1
type: Protein
SIO_000068: ncbiprotein

position:167773:-1
position: 167773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168855:-1
position: 168855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168766-168855:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168260-168338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168049-168166:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167773-167838:-1:exon

CTDNEP1
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: CTDNEP1
note: CTD nuclear envelope phosphatase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(169754..173040)
location: region:169754-173040:-1
so has part: feature:169754-173040:-1:exon
subclass of: SO_0000010

128135985
type: Gene
SIO_000068: ncbigene

position:169754:-1
position: 169754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173040:-1
position: 173040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169754-173040:-1:exon

CTDNEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: CTDNEP1
product: CTD nuclear envelope phosphatase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775072.1
SIO_010081: CTDNEP1
subclass of: SO_0000673
so part of: CTDNEP1
location: complement(join(169754..170154,170614..170698,170782..170893,171242..171358,171453..171524,171650..171768,171970..172036,172774..173040))
location: region:169754-173040:-1
so has part: feature:172774-173040:-1:exon
so has part: feature:171970-172036:-1:exon
so has part: feature:171650-171768:-1:exon
so has part: feature:171453-171524:-1:exon
so has part: feature:171242-171358:-1:exon
so has part: feature:170782-170893:-1:exon
so has part: feature:170614-170698:-1:exon
so has part: feature:169754-170154:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172774-173040:-1:exon

position:172774:-1
position: 172774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:171970-172036:-1:exon

position:171970:-1
position: 171970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172036:-1
position: 172036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:171650-171768:-1:exon

position:171650:-1
position: 171650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171768:-1
position: 171768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:171453-171524:-1:exon

position:171453:-1
position: 171453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171524:-1
position: 171524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:171242-171358:-1:exon

position:171242:-1
position: 171242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171358:-1
position: 171358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:170782-170893:-1:exon

position:170782:-1
position: 170782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170893:-1
position: 170893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:170614-170698:-1:exon

position:170614:-1
position: 170614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170698:-1
position: 170698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:169754-170154:-1:exon

position:170154:-1
position: 170154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CTDNEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: CTDNEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTD nuclear envelope phosphatase 1
translation: MMRTQCLLGLRTFVAFATKLWSFLLYMLRRQVRTVIQYQTVRYDVLPLSPVSRNRLNQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGCAVADKLDNNRSILNRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSRNLHQHRLW
SIO_010081: CTDNEP1
subclass of: SO_0000673
so part of: CTDNEP1
location: complement(join(170094..170154,170614..170698,170782..170893,171242..171358,171453..171524,171650..171768,171970..172036,172774..172875))
location: region:170094-172875:-1
so has part: feature:172774-172875:-1:exon
so has part: feature:171970-172036:-1:exon
so has part: feature:171650-171768:-1:exon
so has part: feature:171453-171524:-1:exon
so has part: feature:171242-171358:-1:exon
so has part: feature:170782-170893:-1:exon
so has part: feature:170614-170698:-1:exon
so has part: feature:170094-170154:-1:exon

XP_052631032.1
type: Protein
SIO_000068: ncbiprotein

position:170094:-1
position: 170094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172875:-1
position: 172875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172774-172875:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:171970-172036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171650-171768:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171453-171524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171242-171358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170782-170893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170614-170698:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170094-170154:-1:exon

ELP5
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: ELP5
note: elongator acetyltransferase complex subunit 5; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(173619..175692)
location: region:173619-175692:-1
so has part: feature:173619-175692:-1:exon
subclass of: SO_0000010

128135984
type: Gene
SIO_000068: ncbigene

position:173619:-1
position: 173619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175692:-1
position: 175692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173619-175692:-1:exon

ELP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: ELP5
product: elongator acetyltransferase complex subunit 5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775071.1
SIO_010081: ELP5
subclass of: SO_0000673
so part of: ELP5
location: complement(join(173619..173830,173918..174150,174256..174434,174782..174999,175311..175391,175468..175528,175603..175692))
location: region:173619-175692:-1
so has part: feature:175603-175692:-1:exon
so has part: feature:175468-175528:-1:exon
so has part: feature:175311-175391:-1:exon
so has part: feature:174782-174999:-1:exon
so has part: feature:174256-174434:-1:exon
so has part: feature:173918-174150:-1:exon
so has part: feature:173619-173830:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175603-175692:-1:exon

position:175603:-1
position: 175603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:175468-175528:-1:exon

position:175468:-1
position: 175468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175528:-1
position: 175528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:175311-175391:-1:exon

position:175311:-1
position: 175311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175391:-1
position: 175391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:174782-174999:-1:exon

position:174782:-1
position: 174782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174999:-1
position: 174999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:174256-174434:-1:exon

position:174256:-1
position: 174256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174434:-1
position: 174434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:173918-174150:-1:exon

position:173918:-1
position: 173918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174150:-1
position: 174150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:173619-173830:-1:exon

position:173830:-1
position: 173830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ELP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: ELP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongator complex protein 5
translation: MLEALVAGGAEGLVLVRDNAACEGRSLLRAFVTAAVQRAERVLVVLFDVPREQFEAGLSPSVKEQLLYRDGFTDPLGWSGPDPDLRAGDFGGLLAGGLPPGGPLTLVLDSLSWLLLRLPPPRLCQALGALLGGAPGSARPSCLLALLHGDLHPPGLLQALGALATTQLILGGAPPSPGTLRLASVLSRPRRGGVRQKDESFTLLPDGSLRSLGVPTPTPEEEDGRPPPAARTPGSPRDSGGRAPSHPLTFRLQLSAAERAARAAVPPPYQLSPPKRSTLLRTPGTIVCALEPPEDEDEDPEDPDYDLDV
SIO_010081: ELP5
subclass of: SO_0000673
so part of: ELP5
location: complement(join(173725..173830,173918..174150,174256..174434,174782..174999,175311..175391,175468..175528,175603..175654))
location: region:173725-175654:-1
so has part: feature:175603-175654:-1:exon
so has part: feature:175468-175528:-1:exon
so has part: feature:175311-175391:-1:exon
so has part: feature:174782-174999:-1:exon
so has part: feature:174256-174434:-1:exon
so has part: feature:173918-174150:-1:exon
so has part: feature:173725-173830:-1:exon

XP_052631031.1
type: Protein
SIO_000068: ncbiprotein

position:173725:-1
position: 173725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175654:-1
position: 175654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175603-175654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175468-175528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:175311-175391:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:174782-174999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:174256-174434:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173918-174150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173725-173830:-1:exon

CLDN7
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: CLDN7
note: claudin 7; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(176125..178384)
location: region:176125-178384:-1
so has part: feature:176125-178384:-1:exon
subclass of: SO_0000010

128135982
type: Gene
SIO_000068: ncbigene

position:176125:-1
position: 176125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178384:-1
position: 178384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176125-178384:-1:exon

CLDN7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: CLDN7
product: claudin 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins
transcript id: XM_052775069.1
SIO_010081: CLDN7
subclass of: SO_0000673
so part of: CLDN7
location: complement(join(176125..176314,176523..176607,176823..176987,178162..178384))
location: region:176125-178384:-1
so has part: feature:178162-178384:-1:exon
so has part: feature:176823-176987:-1:exon
so has part: feature:176523-176607:-1:exon
so has part: feature:176125-176314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178162-178384:-1:exon

position:178162:-1
position: 178162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:176823-176987:-1:exon

position:176823:-1
position: 176823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176987:-1
position: 176987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:176523-176607:-1:exon

position:176523:-1
position: 176523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176607:-1
position: 176607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:176125-176314:-1:exon

position:176314:-1
position: 176314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLDN7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: CLDN7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-7
translation: MAHGGLQVLGLVLSLAGWGALVAAAVLPQWQMSSFAGDTIITAVVTYQGLWMSCASQSTGQLQCKSYDSILALPGYIQVTRALMVVAGVLGPLAMGVAVMGMKCTRCGGDDPRRKAGMAAAGGGLFLLSGLAGLIACSWYGHRIVTNFYDPTVPVNFKFEFGAAIFVGWGGAALALLGGAMLACSCPRRGGHGRAYPRSKAASPQPPSNREYV
SIO_010081: CLDN7
subclass of: SO_0000673
so part of: CLDN7
location: complement(join(176146..176314,176523..176607,176823..176987,178162..178384))
location: region:176146-178384:-1
so has part: feature:178162-178384:-1:exon
so has part: feature:176823-176987:-1:exon
so has part: feature:176523-176607:-1:exon
so has part: feature:176146-176314:-1:exon

XP_052631029.1
type: Protein
SIO_000068: ncbiprotein

position:176146:-1
position: 176146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178162-178384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176823-176987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176523-176607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176146-176314:-1:exon

ZMYND15
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: ZMYND15
note: zinc finger MYND-type containing 15; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(179801..185980)
location: region:179801-185980:-1
so has part: feature:179801-185980:-1:exon
subclass of: SO_0000010

128135954
type: Gene
SIO_000068: ncbigene

position:179801:-1
position: 179801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185980:-1
position: 185980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179801-185980:-1:exon

ZMYND15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: ZMYND15
product: zinc finger MYND-type containing 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_052775028.1
SIO_010081: ZMYND15
subclass of: SO_0000673
so part of: ZMYND15
location: complement(join(179801..179957,180304..180464,181030..181088,181240..181345,181578..181679,182121..182209,182428..182544,183042..183128,183436..183585,183945..184090,184468..184617,184740..184923,185383..185444,185486..185736,185884..185980))
location: region:179801-185980:-1
so has part: feature:185884-185980:-1:exon
so has part: feature:185486-185736:-1:exon
so has part: feature:185383-185444:-1:exon
so has part: feature:184740-184923:-1:exon
so has part: feature:184468-184617:-1:exon
so has part: feature:183945-184090:-1:exon
so has part: feature:183436-183585:-1:exon
so has part: feature:183042-183128:-1:exon
so has part: feature:182428-182544:-1:exon
so has part: feature:182121-182209:-1:exon
so has part: feature:181578-181679:-1:exon
so has part: feature:181240-181345:-1:exon
so has part: feature:181030-181088:-1:exon
so has part: feature:180304-180464:-1:exon
so has part: feature:179801-179957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185884-185980:-1:exon

position:185884:-1
position: 185884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185486-185736:-1:exon

position:185486:-1
position: 185486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185736:-1
position: 185736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:185383-185444:-1:exon

position:185383:-1
position: 185383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185444:-1
position: 185444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:184740-184923:-1:exon

position:184740:-1
position: 184740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184923:-1
position: 184923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:184468-184617:-1:exon

position:184468:-1
position: 184468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184617:-1
position: 184617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:183945-184090:-1:exon

position:183945:-1
position: 183945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184090:-1
position: 184090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:183436-183585:-1:exon

position:183436:-1
position: 183436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183585:-1
position: 183585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:183042-183128:-1:exon

position:183042:-1
position: 183042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183128:-1
position: 183128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:182428-182544:-1:exon

position:182428:-1
position: 182428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182544:-1
position: 182544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:182121-182209:-1:exon

position:182121:-1
position: 182121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182209:-1
position: 182209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:181578-181679:-1:exon

position:181578:-1
position: 181578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181679:-1
position: 181679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:181240-181345:-1:exon

position:181240:-1
position: 181240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181345:-1
position: 181345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:181030-181088:-1:exon

position:181030:-1
position: 181030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181088:-1
position: 181088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:180304-180464:-1:exon

position:180304:-1
position: 180304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180464:-1
position: 180464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:179801-179957:-1:exon

position:179957:-1
position: 179957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZMYND15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: ZMYND15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYND domain-containing protein 15
translation: MEFLTGYRAELLELVSLVLGWRWGAGGTPPRPGALRQLPPEPGPWVLHALPNARLGVALPAGGGPAGGGGPLGTPGDPSAETRPLEEEEEEEEQEQGGSRGGRPGRTPAGPPWASTSSWGPPAPPPRPPPARRALALLCRAMGCPMAGGPPRRPCQLAVGDAGLHTALQPAAARLGVTLVGTHLRGWGPPPTLGPPALRSRLCHACGGLARTPLPCPQCRAVLYCSEGCRAAEALGVHRGWCRQLRGFMGRTAALAQLPFTFTAEVTSETFDKERFLGARGLTRGGWAHLSMLVRAPDYGVGLGGDCHPLGTPHDLPFEGLQPAGEVSLPPAPSEPPPPNSFFSSWQQYYAWRGLPLSSPLAALLSYPLSLYYIVTSLVPQHFPELNILRKRSLRVQVEESGRELQLVGLFWELSVLLPHVSLELLFLGGSVPPPMDGRRFLLHRTEVQELLPGTPPKVGGPRGVQVAFSTRPGPRPDLVIGFNPGFALKESWLSTLPRLQAQRVPAYFAEGGEYGCTVARAAVGAATGGGTGPPLLNPFRCPFRQPGLDNALPWYANAFIFQLLYKGGGGGGPVPPRQRLPLPARPPPAPPASAAATSAPPRRRR
SIO_010081: ZMYND15
subclass of: SO_0000673
so part of: ZMYND15
location: complement(join(179801..179957,180304..180464,181030..181088,181240..181345,181578..181679,182121..182209,182428..182544,183042..183128,183436..183585,183945..184090,184468..184617,184740..184923,185383..185444,185486..185736))
location: region:179801-185736:-1
so has part: feature:185486-185736:-1:exon
so has part: feature:185383-185444:-1:exon
so has part: feature:184740-184923:-1:exon
so has part: feature:184468-184617:-1:exon
so has part: feature:183945-184090:-1:exon
so has part: feature:183436-183585:-1:exon
so has part: feature:183042-183128:-1:exon
so has part: feature:182428-182544:-1:exon
so has part: feature:182121-182209:-1:exon
so has part: feature:181578-181679:-1:exon
so has part: feature:181240-181345:-1:exon
so has part: feature:181030-181088:-1:exon
so has part: feature:180304-180464:-1:exon
so has part: feature:179801-179957:-1:exon

XP_052630988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185486-185736:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185383-185444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:184740-184923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:184468-184617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:183945-184090:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:183436-183585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:183042-183128:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:182428-182544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:182121-182209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:181578-181679:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:181240-181345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:181030-181088:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:180304-180464:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:179801-179957:-1:exon

LOC128135981
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LOC128135981
note: uncharacterized LOC128135981; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 186501..188441
location: region:186501-188441:1
so has part: feature:186501-188441:1:exon
subclass of: SO_0000010

128135981
type: Gene
SIO_000068: ncbigene

position:186501:1
position: 186501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188441:1
position: 188441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186501-188441:1:exon

LOC128135981
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LOC128135981
product: uncharacterized LOC128135981, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_052775067.1
SIO_010081: LOC128135981
subclass of: SO_0000673
so part of: LOC128135981
location: join(186501..186621,186871..187009,187544..187626,187729..188441)
location: region:186501-188441:1
so has part: feature:186501-186621:1:exon
so has part: feature:186871-187009:1:exon
so has part: feature:187544-187626:1:exon
so has part: feature:187729-188441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186501-186621:1:exon

position:186621:1
position: 186621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:186871-187009:1:exon

position:186871:1
position: 186871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187009:1
position: 187009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:187544-187626:1:exon

position:187544:1
position: 187544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187626:1
position: 187626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:187729-188441:1:exon

position:187729:1
position: 187729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128135981
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LOC128135981
product: uncharacterized LOC128135981, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_052775068.1
SIO_010081: LOC128135981
subclass of: SO_0000673
so part of: LOC128135981
location: join(186501..186621,186871..187009,187544..187626,187732..188441)
location: region:186501-188441:1
so has part: feature:186501-186621:1:exon
so has part: feature:186871-187009:1:exon
so has part: feature:187544-187626:1:exon
so has part: feature:187732-188441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186501-186621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186871-187009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187544-187626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187732-188441:1:exon

position:187732:1
position: 187732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128135981
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LOC128135981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC128135981 isoform X1
translation: MGPGLLLLLLLLLPWGALGNVGGSAGACTCTHRWPWKPPPAVRLPPLAPYVLRADLCPNHVRRFVLPHKQICGLQDSPWVVELLQLWERQAAQRPLAGPLATDRPPDGRPATDRPTDGRPATDRPTDGPLARPPAMHGPPDGPPASPLAPLSPPAPEGPPASPTVKCSTPSSSSPTPHPAVRLGEEHGDESGGQLLGVPQALPPTPAGWIHREAVGQDPQMPPPAVGPAPLSVGLAMGVILLGAGLGLVGVLACSGGLPGSRERRGARLLTSA
SIO_010081: LOC128135981
subclass of: SO_0000673
so part of: LOC128135981
location: join(186573..186621,186871..187009,187544..187626,187729..188279)
location: region:186573-188279:1
so has part: feature:186573-186621:1:exon
so has part: feature:186871-187009:1:exon
so has part: feature:187544-187626:1:exon
so has part: feature:187729-188279:1:exon

XP_052631027.1
type: Protein
SIO_000068: ncbiprotein

position:186573:1
position: 186573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188279:1
position: 188279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186573-186621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186871-187009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187544-187626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187729-188279:1:exon

LOC128135981
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LOC128135981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC128135981 isoform X2
translation: MGPGLLLLLLLLLPWGALGNVGGSAGACTCTHRWPWKPPPAVRLPPLAPYVLRADLCPNHVRRFVLPHKQICGLQDSPWVVELLQLWERQAQRPLAGPLATDRPPDGRPATDRPTDGRPATDRPTDGPLARPPAMHGPPDGPPASPLAPLSPPAPEGPPASPTVKCSTPSSSSPTPHPAVRLGEEHGDESGGQLLGVPQALPPTPAGWIHREAVGQDPQMPPPAVGPAPLSVGLAMGVILLGAGLGLVGVLACSGGLPGSRERRGARLLTSA
SIO_010081: LOC128135981
subclass of: SO_0000673
so part of: LOC128135981
location: join(186573..186621,186871..187009,187544..187626,187732..188279)
location: region:186573-188279:1
so has part: feature:186573-186621:1:exon
so has part: feature:186871-187009:1:exon
so has part: feature:187544-187626:1:exon
so has part: feature:187732-188279:1:exon

XP_052631028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186573-186621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186871-187009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187544-187626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187732-188279:1:exon

MED11
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: MED11
note: mediator complex subunit 11; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(188450..189488)
location: region:188450-189488:-1
so has part: feature:188450-189488:-1:exon
subclass of: SO_0000010

128135983
type: Gene
SIO_000068: ncbigene

position:188450:-1
position: 188450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189488:-1
position: 189488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188450-189488:-1:exon

MED11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: MED11
product: mediator complex subunit 11
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775070.1
SIO_010081: MED11
subclass of: SO_0000673
so part of: MED11
location: complement(join(188450..188816,188890..189020,189370..189488))
location: region:188450-189488:-1
so has part: feature:189370-189488:-1:exon
so has part: feature:188890-189020:-1:exon
so has part: feature:188450-188816:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189370-189488:-1:exon

position:189370:-1
position: 189370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188890-189020:-1:exon

position:188890:-1
position: 188890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189020:-1
position: 189020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:188450-188816:-1:exon

position:188816:-1
position: 188816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MED11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: MED11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 11
translation: MAGYGVANERLRVLEELEREIGASLQSAGTVILELSKEKAGERLLERQAAQFSAAVQKVESELSAQIRYLTQVATGQPHEGSSYSARKACQMALNRVDYARLKLGELARACEQMLEP
SIO_010081: MED11
subclass of: SO_0000673
so part of: MED11
location: complement(join(188679..188816,188890..189020,189370..189454))
location: region:188679-189454:-1
so has part: feature:189370-189454:-1:exon
so has part: feature:188890-189020:-1:exon
so has part: feature:188679-188816:-1:exon

XP_052631030.1
type: Protein
SIO_000068: ncbiprotein

position:188679:-1
position: 188679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189454:-1
position: 189454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189370-189454:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188890-189020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188679-188816:-1:exon

ARRB2
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: ARRB2
note: arrestin beta 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(190075..194454)
location: region:190075-194454:-1
so has part: feature:190075-194454:-1:exon
subclass of: SO_0000010

128135978
type: Gene
SIO_000068: ncbigene

position:190075:-1
position: 190075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194454:-1
position: 194454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190075-194454:-1:exon

ARRB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: ARRB2
product: arrestin beta 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
transcript id: XM_052775062.1
SIO_010081: ARRB2
subclass of: SO_0000673
so part of: ARRB2
location: complement(join(190075..190214,190345..190399,190494..190573,190664..190747,190864..191001,191307..191379,191530..191614,191834..191969,192095..192162,192402..192461,192635..192832,192943..192987,193239..193299,193531..193561,194366..194454))
location: region:190075-194454:-1
so has part: feature:194366-194454:-1:exon
so has part: feature:193531-193561:-1:exon
so has part: feature:193239-193299:-1:exon
so has part: feature:192943-192987:-1:exon
so has part: feature:192635-192832:-1:exon
so has part: feature:192402-192461:-1:exon
so has part: feature:192095-192162:-1:exon
so has part: feature:191834-191969:-1:exon
so has part: feature:191530-191614:-1:exon
so has part: feature:191307-191379:-1:exon
so has part: feature:190864-191001:-1:exon
so has part: feature:190664-190747:-1:exon
so has part: feature:190494-190573:-1:exon
so has part: feature:190345-190399:-1:exon
so has part: feature:190075-190214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:194366-194454:-1:exon

position:194366:-1
position: 194366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:193531-193561:-1:exon

position:193531:-1
position: 193531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193561:-1
position: 193561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:193239-193299:-1:exon

position:193239:-1
position: 193239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193299:-1
position: 193299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:192943-192987:-1:exon

position:192943:-1
position: 192943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192987:-1
position: 192987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:192635-192832:-1:exon

position:192635:-1
position: 192635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192832:-1
position: 192832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:192402-192461:-1:exon

position:192402:-1
position: 192402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192461:-1
position: 192461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:192095-192162:-1:exon

position:192095:-1
position: 192095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192162:-1
position: 192162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:191834-191969:-1:exon

position:191834:-1
position: 191834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191969:-1
position: 191969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:191530-191614:-1:exon

position:191530:-1
position: 191530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191614:-1
position: 191614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:191307-191379:-1:exon

position:191307:-1
position: 191307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191379:-1
position: 191379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:190864-191001:-1:exon

position:190864:-1
position: 190864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191001:-1
position: 191001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:190664-190747:-1:exon

position:190664:-1
position: 190664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190747:-1
position: 190747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:190494-190573:-1:exon

position:190494:-1
position: 190494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190573:-1
position: 190573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:190345-190399:-1:exon

position:190345:-1
position: 190345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190399:-1
position: 190399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:190075-190214:-1:exon

position:190214:-1
position: 190214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARRB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: ARRB2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: beta-arrestin-2
translation: MGEKAGTRVFKKSSPNCKLTVYLGKRDFVDHLDRVDPVDGVVLVDPDYLKDRKVFVTLTCAFRYGREDLDVLGLSFRKDLFAATRQAVPPLPEERRPPTRLQQRLLRKLGPAAHPFAFTIPQNLPCSVTLQPGPEDTGKACGVDFEIRAFCAKSLEEKIHKRNSVRLVIRKVQYAPEQPGPQPSAETTRHFLMSERSLHLEASLDKELYYHGEPLNVNVHVTNNSSKSIKRVKISVRQFADICLFSTAQYKCPVAQIEQEDQVPPSATFCKVYTLTPLLSNNRERRGLALDGKLKHEDTNLASSTIVKEGTNKEVLGILVSYRVKVKLVVARGGDVSVELPFILMHPKPPEPCPPPQSQSALPETDTPVDTNLIEFETNYGPDDDIVFEDFARLRLKGLKDEKDDEDQFC
SIO_010081: ARRB2
subclass of: SO_0000673
so part of: ARRB2
location: complement(join(190118..190214,190345..190399,190494..190573,190664..190747,190864..191001,191307..191379,191530..191614,191834..191969,192095..192162,192402..192461,192635..192832,192943..192987,193239..193299,193531..193561,194366..194388))
location: region:190118-194388:-1
so has part: feature:194366-194388:-1:exon
so has part: feature:193531-193561:-1:exon
so has part: feature:193239-193299:-1:exon
so has part: feature:192943-192987:-1:exon
so has part: feature:192635-192832:-1:exon
so has part: feature:192402-192461:-1:exon
so has part: feature:192095-192162:-1:exon
so has part: feature:191834-191969:-1:exon
so has part: feature:191530-191614:-1:exon
so has part: feature:191307-191379:-1:exon
so has part: feature:190864-191001:-1:exon
so has part: feature:190664-190747:-1:exon
so has part: feature:190494-190573:-1:exon
so has part: feature:190345-190399:-1:exon
so has part: feature:190118-190214:-1:exon

XP_052631022.1
type: Protein
SIO_000068: ncbiprotein

position:190118:-1
position: 190118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194388:-1
position: 194388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194366-194388:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193531-193561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193239-193299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192943-192987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192635-192832:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192402-192461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:192095-192162:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191834-191969:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191530-191614:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:191307-191379:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:190864-191001:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190664-190747:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190494-190573:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:190345-190399:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:190118-190214:-1:exon

PELP1
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: PELP1
note: proline, glutamate and leucine rich protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 194819..202898
location: region:194819-202898:1
so has part: feature:194819-202898:1:exon
subclass of: SO_0000010

128135976
type: Gene
SIO_000068: ncbigene

position:194819:1
position: 194819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202898:1
position: 202898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194819-202898:1:exon

PELP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: PELP1
product: proline, glutamate and leucine rich protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_052775061.1
SIO_010081: PELP1
subclass of: SO_0000673
so part of: PELP1
location: join(194819..194998,195336..195400,196201..196306,196596..196745,197309..197380,197500..197559,198108..198258,198677..198806,198903..198990,199169..199257,199638..199754,200103..200253,200327..200453,200689..200744,201122..201358,201925..202898)
location: region:194819-202898:1
so has part: feature:194819-194998:1:exon
so has part: feature:195336-195400:1:exon
so has part: feature:196201-196306:1:exon
so has part: feature:196596-196745:1:exon
so has part: feature:197309-197380:1:exon
so has part: feature:197500-197559:1:exon
so has part: feature:198108-198258:1:exon
so has part: feature:198677-198806:1:exon
so has part: feature:198903-198990:1:exon
so has part: feature:199169-199257:1:exon
so has part: feature:199638-199754:1:exon
so has part: feature:200103-200253:1:exon
so has part: feature:200327-200453:1:exon
so has part: feature:200689-200744:1:exon
so has part: feature:201122-201358:1:exon
so has part: feature:201925-202898:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:194819-194998:1:exon

position:194998:1
position: 194998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195336-195400:1:exon

position:195336:1
position: 195336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195400:1
position: 195400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196201-196306:1:exon

position:196201:1
position: 196201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196306:1
position: 196306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:196596-196745:1:exon

position:196596:1
position: 196596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196745:1
position: 196745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:197309-197380:1:exon

position:197309:1
position: 197309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197380:1
position: 197380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:197500-197559:1:exon

position:197500:1
position: 197500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197559:1
position: 197559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:198108-198258:1:exon

position:198108:1
position: 198108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198258:1
position: 198258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:198677-198806:1:exon

position:198677:1
position: 198677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198806:1
position: 198806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:198903-198990:1:exon

position:198903:1
position: 198903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198990:1
position: 198990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:199169-199257:1:exon

position:199169:1
position: 199169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199257:1
position: 199257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:199638-199754:1:exon

position:199638:1
position: 199638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199754:1
position: 199754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:200103-200253:1:exon

position:200103:1
position: 200103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200253:1
position: 200253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:200327-200453:1:exon

position:200327:1
position: 200327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200453:1
position: 200453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:200689-200744:1:exon

position:200689:1
position: 200689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200744:1
position: 200744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:201122-201358:1:exon

position:201122:1
position: 201122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201358:1
position: 201358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:201925-202898:1:exon

position:201925:1
position: 201925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PELP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: PELP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-, glutamic acid- and leucine-rich protein 1
translation: MAAVAAARAPAAPLLEALSALPPSRRALPGLVRGLRDSAGTQSAQAIGGLVGVTSARLGSMKTRFEGLCLLSLLVSESPTEPFQQHCLGWLRCLQHLLQSQDPAPTMALGVAVLHDLLLFSSQLPELARDIGTNHIPGLLTSLLALKPECEVSTLEGIKSCMTFYPRACGSMRGKLAAYFLSRIDSESPQLQQLACECYALLPALGRGFSQGLRHTECWNQEVQGLLATLHGLLGALFEGSETDPLPYEGPGVEMLLPAPQDGDTGFILTLHNRFSGLARVLQLLLSKEFVAPVTVPVQDVLDLICRALNITSKNINWFGDGPLKMLLLPSVHLDMLDVLSSLILACGARLVRWGSVLGRLFPQVLSAWSGAREAALPGQEKPFSAVRTRLYQVLELWVEVAGAASGVLQGPGAPGEVLLAHLLSDITPPAEGIKLKADPKPSAPKRPKLGDGGDSPALHRKLEPAANSDVCRAALRALRRAILTGGPLIKEETHRRLQELVVPLLLRLPQTEVPPGPPAAAAGPPGTPYASPPCRAALYQLLLALVLAPAPAGAPPLHCALRAFGQGQRDPALQVSSVCTEALVVANALARPWVPPLHPTAVPGAPPEPPAPPLPPPAAPRLPRGTPGCPRQSARTPPAAAAGGGAPRGGPPRAAPRRPWGRGGGRPGGGASPAPRLRALRQGGALGRGDLPGERLGRQRGHRPQAGCTPLAPWPQERGAPAATPPSPPLAPPEPPEELGPPPPPPAAPAAAAPRRPPGRPPGAAGDPRGARPGCDQHQQQRGGGGGGGRGGGGGRGVRGGRVLRGGGRRGGGGGGRVRRGGRAG
SIO_010081: PELP1
subclass of: SO_0000673
so part of: PELP1
location: join(194873..194998,195336..195400,196201..196306,196596..196745,197309..197380,197500..197559,198108..198258,198677..198806,198903..198990,199169..199257,199638..199754,200103..200253,200327..200453,200689..200744,201122..201358,201925..202680)
location: region:194873-202680:1
so has part: feature:194873-194998:1:exon
so has part: feature:195336-195400:1:exon
so has part: feature:196201-196306:1:exon
so has part: feature:196596-196745:1:exon
so has part: feature:197309-197380:1:exon
so has part: feature:197500-197559:1:exon
so has part: feature:198108-198258:1:exon
so has part: feature:198677-198806:1:exon
so has part: feature:198903-198990:1:exon
so has part: feature:199169-199257:1:exon
so has part: feature:199638-199754:1:exon
so has part: feature:200103-200253:1:exon
so has part: feature:200327-200453:1:exon
so has part: feature:200689-200744:1:exon
so has part: feature:201122-201358:1:exon
so has part: feature:201925-202680:1:exon

XP_052631021.1
type: Protein
SIO_000068: ncbiprotein

position:194873:1
position: 194873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202680:1
position: 202680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194873-194998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195336-195400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196201-196306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196596-196745:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197309-197380:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197500-197559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:198108-198258:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198677-198806:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198903-198990:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199169-199257:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199638-199754:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200103-200253:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:200327-200453:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:200689-200744:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:201122-201358:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:201925-202680:1:exon

SNAPC2
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: SNAPC2
note: small nuclear RNA activating complex polypeptide 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 203582..205607
location: region:203582-205607:1
so has part: feature:203582-205607:1:exon
subclass of: SO_0000010

128135967
type: Gene
SIO_000068: ncbigene

position:203582:1
position: 203582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205607:1
position: 205607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203582-205607:1:exon

SNAPC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: SNAPC2
product: small nuclear RNA activating complex polypeptide 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_052775043.1
SIO_010081: SNAPC2
subclass of: SO_0000673
so part of: SNAPC2
location: join(203582..203842,204339..204458,204547..204615,204735..204966,205292..205607)
location: region:203582-205607:1
so has part: feature:203582-203842:1:exon
so has part: feature:204339-204458:1:exon
so has part: feature:204547-204615:1:exon
so has part: feature:204735-204966:1:exon
so has part: feature:205292-205607:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203582-203842:1:exon

position:203842:1
position: 203842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:204339-204458:1:exon

position:204339:1
position: 204339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204458:1
position: 204458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:204547-204615:1:exon

position:204547:1
position: 204547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204615:1
position: 204615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:204735-204966:1:exon

position:204735:1
position: 204735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204966:1
position: 204966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:205292-205607:1:exon

position:205292:1
position: 205292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNAPC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: SNAPC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: snRNA-activating protein complex subunit 2
translation: MKPPLRPRLAPARYVTGPGAAAEPERPRAAWSAREKRALLAALRAQAALGLPDLQPRPLRERLPRRSEAEILSFLCRLRGRAAREAVRTQYRHCLEQQRQRRAQVPAPIEVWLELAETLAEGLEEATAAAFSQVLTVAATEPLSLLHSVPPHPAGTTAAPDQGGSAPGDPAAPPAPQPHAPGAFTVDFQRVYEYLARLCRGGKGPVLPPGESAVVLALLGSLPQELGVLDRAALHSHLRGAYGALTAPRHPQTDSPAPGMAPGVPPAPGTPATGWRGVGLCPLNLFLVPLRLLARAEPSG
SIO_010081: SNAPC2
subclass of: SO_0000673
so part of: SNAPC2
location: join(203633..203842,204339..204458,204547..204615,204735..204966,205292..205563)
location: region:203633-205563:1
so has part: feature:203633-203842:1:exon
so has part: feature:204339-204458:1:exon
so has part: feature:204547-204615:1:exon
so has part: feature:204735-204966:1:exon
so has part: feature:205292-205563:1:exon

XP_052631003.1
type: Protein
SIO_000068: ncbiprotein

position:203633:1
position: 203633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205563:1
position: 205563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203633-203842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204339-204458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204547-204615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204735-204966:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205292-205563:1:exon

COPS6
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: COPS6
note: COP9 signalosome subunit 6; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 205874..209594
location: region:205874-209594:1
so has part: feature:205874-209594:1:exon
subclass of: SO_0000010

128135966
type: Gene
SIO_000068: ncbigene

position:205874:1
position: 205874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209594:1
position: 209594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205874-209594:1:exon

COPS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: COPS6
product: COP9 signalosome subunit 6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775042.1
SIO_010081: COPS6
subclass of: SO_0000673
so part of: COPS6
location: join(205874..206025,206510..206635,207120..207251,207579..207667,207746..207808,207919..207966,208398..208512,208736..208828,209008..209108,209323..209594)
location: region:205874-209594:1
so has part: feature:205874-206025:1:exon
so has part: feature:206510-206635:1:exon
so has part: feature:207120-207251:1:exon
so has part: feature:207579-207667:1:exon
so has part: feature:207746-207808:1:exon
so has part: feature:207919-207966:1:exon
so has part: feature:208398-208512:1:exon
so has part: feature:208736-208828:1:exon
so has part: feature:209008-209108:1:exon
so has part: feature:209323-209594:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205874-206025:1:exon

position:206025:1
position: 206025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:206510-206635:1:exon

position:206510:1
position: 206510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206635:1
position: 206635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:207120-207251:1:exon

position:207120:1
position: 207120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207251:1
position: 207251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207579-207667:1:exon

position:207579:1
position: 207579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207667:1
position: 207667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:207746-207808:1:exon

position:207746:1
position: 207746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207808:1
position: 207808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:207919-207966:1:exon

position:207919:1
position: 207919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207966:1
position: 207966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:208398-208512:1:exon

position:208398:1
position: 208398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208512:1
position: 208512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:208736-208828:1:exon

position:208736:1
position: 208736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208828:1
position: 208828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:209008-209108:1:exon

position:209008:1
position: 209008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209108:1
position: 209108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:209323-209594:1:exon

position:209323:1
position: 209323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COPS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: COPS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 6
translation: MHRVAAYGGRAGTGRAKMAAAAAGASSSASGSNGAGGMEVDVAAAPSVMAGGVTGSVSVALHPLVILNISDHWIRMRSQEGRPGQVIGALIGRQEGRNIEVMNSFELLSHTVDGHVLIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVRASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNILYDRQGIGRRMRGLFF
SIO_010081: COPS6
subclass of: SO_0000673
so part of: COPS6
location: join(205896..206025,206510..206635,207120..207251,207579..207667,207746..207808,207919..207966,208398..208512,208736..208828,209008..209108,209323..209463)
location: region:205896-209463:1
so has part: feature:205896-206025:1:exon
so has part: feature:206510-206635:1:exon
so has part: feature:207120-207251:1:exon
so has part: feature:207579-207667:1:exon
so has part: feature:207746-207808:1:exon
so has part: feature:207919-207966:1:exon
so has part: feature:208398-208512:1:exon
so has part: feature:208736-208828:1:exon
so has part: feature:209008-209108:1:exon
so has part: feature:209323-209463:1:exon

XP_052631002.1
type: Protein
SIO_000068: ncbiprotein

position:205896:1
position: 205896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209463:1
position: 209463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205896-206025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206510-206635:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207120-207251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207579-207667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207746-207808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207919-207966:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:208398-208512:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208736-208828:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209008-209108:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209323-209463:1:exon

MCM7
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: MCM7
note: minichromosome maintenance complex component 7; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(209747..214849)
location: region:209747-214849:-1
so has part: feature:209747-214849:-1:exon
subclass of: SO_0000010

128135969
type: Gene
SIO_000068: ncbigene

position:209747:-1
position: 209747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214849:-1
position: 214849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209747-214849:-1:exon

MCM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: MCM7
product: minichromosome maintenance complex component 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
transcript id: XM_052775049.1
SIO_010081: MCM7
subclass of: SO_0000673
so part of: MCM7
location: complement(join(209747..210107,210264..210373,210902..211070,211166..211249,211475..211868,211953..212036,212310..212441,212554..212668,212751..212900,213372..213509,213587..213767,214012..214136,214232..214396,214620..214699,214798..214849))
location: region:209747-214849:-1
so has part: feature:214798-214849:-1:exon
so has part: feature:214620-214699:-1:exon
so has part: feature:214232-214396:-1:exon
so has part: feature:214012-214136:-1:exon
so has part: feature:213587-213767:-1:exon
so has part: feature:213372-213509:-1:exon
so has part: feature:212751-212900:-1:exon
so has part: feature:212554-212668:-1:exon
so has part: feature:212310-212441:-1:exon
so has part: feature:211953-212036:-1:exon
so has part: feature:211475-211868:-1:exon
so has part: feature:211166-211249:-1:exon
so has part: feature:210902-211070:-1:exon
so has part: feature:210264-210373:-1:exon
so has part: feature:209747-210107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:214798-214849:-1:exon

position:214798:-1
position: 214798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214620-214699:-1:exon

position:214620:-1
position: 214620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214699:-1
position: 214699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:214232-214396:-1:exon

position:214232:-1
position: 214232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214396:-1
position: 214396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:214012-214136:-1:exon

position:214012:-1
position: 214012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214136:-1
position: 214136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:213587-213767:-1:exon

position:213587:-1
position: 213587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213767:-1
position: 213767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:213372-213509:-1:exon

position:213372:-1
position: 213372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213509:-1
position: 213509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:212751-212900:-1:exon

position:212751:-1
position: 212751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212900:-1
position: 212900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:212554-212668:-1:exon

position:212554:-1
position: 212554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212668:-1
position: 212668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:212310-212441:-1:exon

position:212310:-1
position: 212310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212441:-1
position: 212441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:211953-212036:-1:exon

position:211953:-1
position: 211953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212036:-1
position: 212036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:211475-211868:-1:exon

position:211475:-1
position: 211475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211868:-1
position: 211868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:211166-211249:-1:exon

position:211166:-1
position: 211166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211249:-1
position: 211249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:210902-211070:-1:exon

position:210902:-1
position: 210902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211070:-1
position: 211070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:210264-210373:-1:exon

position:210264:-1
position: 210264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210373:-1
position: 210373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:209747-210107:-1:exon

position:210107:-1
position: 210107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MCM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: MCM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication licensing factor MCM7
translation: MAPRDYAAEKEKAKRFLQDFYRDGADGGKEFPYREQLTALAHRERVALYVALDDVAEDDPELAEAVCDNAKRYGRLFADAVHELLPLYKEREVSRKDVLDVYIEHRLLLEQRGRDAGDTRSPQNQYPPELLRRFELYFKAPSTAKARVVRDVKADCIGKLVTVRGIVTRVTEVKPMMVVATYSCDQCGAETYQPIQSPTFMPLLMCPSRECQTNRSGGRLYLQSRGSKFIKFQELKMQEHTDQVPVGHLPRSISVAVHGENTRLAQPGDHVSVTGVFLPLLKTGFRQMAQGLLSETYLEAHCIVKMNKSEEDESGAGDLSEEELRQITEEDFYDKLAASIAPEIYGHEDVKKALLLLLVGGVDRNPHGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDPLTGELALEGGALVLADRGVCCIDEFDKMLEADRTAIHEVMEQQSISIAKAGVLATLNARCAILAAANPAYGRYNPKRSLEHNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPCSFQQLDMKLMRRYIAMCKRKQPVVPEALADYITAAYVEMRKEAWASKDTTYTSARTLLGILRLATALARLRLVDVVEKEDVNEAMRLMEMSKDSLLGDKGQQSRVQRPADAIFAAVRELAGGRAVPYAEALQRCLAKGFTPAQVQAALQEYEELNVLQVNAARTRITFV
SIO_010081: MCM7
subclass of: SO_0000673
so part of: MCM7
location: complement(join(209909..210107,210264..210373,210902..211070,211166..211249,211475..211868,211953..212036,212310..212441,212554..212668,212751..212900,213372..213509,213587..213767,214012..214136,214232..214396,214620..214699,214798..214828))
location: region:209909-214828:-1
so has part: feature:214798-214828:-1:exon
so has part: feature:214620-214699:-1:exon
so has part: feature:214232-214396:-1:exon
so has part: feature:214012-214136:-1:exon
so has part: feature:213587-213767:-1:exon
so has part: feature:213372-213509:-1:exon
so has part: feature:212751-212900:-1:exon
so has part: feature:212554-212668:-1:exon
so has part: feature:212310-212441:-1:exon
so has part: feature:211953-212036:-1:exon
so has part: feature:211475-211868:-1:exon
so has part: feature:211166-211249:-1:exon
so has part: feature:210902-211070:-1:exon
so has part: feature:210264-210373:-1:exon
so has part: feature:209909-210107:-1:exon

XP_052631009.1
type: Protein
SIO_000068: ncbiprotein

position:209909:-1
position: 209909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214828:-1
position: 214828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214798-214828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214620-214699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214232-214396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214012-214136:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213587-213767:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213372-213509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:212751-212900:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212554-212668:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212310-212441:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211953-212036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:211475-211868:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:211166-211249:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:210902-211070:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:210264-210373:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:209909-210107:-1:exon

AP4M1
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: AP4M1
note: adaptor related protein complex 4 subunit mu 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 214931..218785
location: region:214931-218785:1
so has part: feature:214931-218785:1:exon
subclass of: SO_0000010

128135970
type: Gene
SIO_000068: ncbigene

position:214931:1
position: 214931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218785:1
position: 218785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214931-218785:1:exon

AP4M1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: AP4M1
product: adaptor related protein complex 4 subunit mu 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775051.1
SIO_010081: AP4M1
subclass of: SO_0000673
so part of: AP4M1
location: join(214931..215078,215466..215530,215626..215720,215797..215903,216462..216572,216664..216744,216818..216880,217070..217136,217228..217281,217430..217536,217610..217701,217792..217836,217906..217956,218030..218147,218405..218785)
location: region:214931-218785:1
so has part: feature:214931-215078:1:exon
so has part: feature:215466-215530:1:exon
so has part: feature:215626-215720:1:exon
so has part: feature:215797-215903:1:exon
so has part: feature:216462-216572:1:exon
so has part: feature:216664-216744:1:exon
so has part: feature:216818-216880:1:exon
so has part: feature:217070-217136:1:exon
so has part: feature:217228-217281:1:exon
so has part: feature:217430-217536:1:exon
so has part: feature:217610-217701:1:exon
so has part: feature:217792-217836:1:exon
so has part: feature:217906-217956:1:exon
so has part: feature:218030-218147:1:exon
so has part: feature:218405-218785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:214931-215078:1:exon

position:215078:1
position: 215078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:215466-215530:1:exon

position:215466:1
position: 215466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215530:1
position: 215530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:215626-215720:1:exon

position:215626:1
position: 215626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215720:1
position: 215720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:215797-215903:1:exon

position:215797:1
position: 215797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215903:1
position: 215903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:216462-216572:1:exon

position:216462:1
position: 216462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216572:1
position: 216572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:216664-216744:1:exon

position:216664:1
position: 216664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216744:1
position: 216744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:216818-216880:1:exon

position:216818:1
position: 216818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216880:1
position: 216880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:217070-217136:1:exon

position:217070:1
position: 217070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217136:1
position: 217136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:217228-217281:1:exon

position:217228:1
position: 217228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217281:1
position: 217281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:217430-217536:1:exon

position:217430:1
position: 217430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217536:1
position: 217536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:217610-217701:1:exon

position:217610:1
position: 217610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217701:1
position: 217701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:217792-217836:1:exon

position:217792:1
position: 217792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217836:1
position: 217836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:217906-217956:1:exon

position:217906:1
position: 217906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217956:1
position: 217956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:218030-218147:1:exon

position:218030:1
position: 218030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218147:1
position: 218147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:218405-218785:1:exon

position:218405:1
position: 218405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AP4M1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: AP4M1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-4 complex subunit mu-1 isoform X2
translation: MATRGGPARATLPSAVSCDRQAPGGTQTGDAVPDLHPLFQGRPAHPQGLPRGDLRHQYGPCRHLLPQNHLAAGGPGPCLHGTRGPALCPRAACRALLCGHHDGGCVALHSGGIPQQDYGYVQTTAPEVLRNFMHMEPVATKPFSLLDLGSIGLFGAETQQSRVAPSSAASRPVLPPRGEQGTRNEVFVDVVERLTVVIAANGTPMKVDVQGEIRLKCYLPSCVEMRIGLTEEFCVGKSEVRGYGTAVRVDECAFHSSIKLDEFESGRVLKVTPSQGELTLMQYQLADDIPSPLPFRLFPTVDQDPTGRLRLYLKLRCDLPPKSQALNVRLQLPVPKGVSSLAQELSSPEQTAELQPGTKSIHWDIPRCQGGSQLSALFKLEVPGLSRASLLELGPANLAFELPAHTCSGLHVRFVRLPGPTGPPQRWVRYLTHSDSYVLRL
SIO_010081: AP4M1
subclass of: SO_0000673
so part of: AP4M1
location: join(214998..215078,215466..215530,215626..215720,215797..215903,216462..216572,216664..216744,216818..216880,217070..217136,217228..217281,217430..217536,217610..217701,217792..217836,217906..217956,218030..218147,218405..218593)
location: region:214998-218593:1
so has part: feature:214998-215078:1:exon
so has part: feature:215466-215530:1:exon
so has part: feature:215626-215720:1:exon
so has part: feature:215797-215903:1:exon
so has part: feature:216462-216572:1:exon
so has part: feature:216664-216744:1:exon
so has part: feature:216818-216880:1:exon
so has part: feature:217070-217136:1:exon
so has part: feature:217228-217281:1:exon
so has part: feature:217430-217536:1:exon
so has part: feature:217610-217701:1:exon
so has part: feature:217792-217836:1:exon
so has part: feature:217906-217956:1:exon
so has part: feature:218030-218147:1:exon
so has part: feature:218405-218593:1:exon

XP_052631011.1
type: Protein
SIO_000068: ncbiprotein

position:214998:1
position: 214998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218593:1
position: 218593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214998-215078:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215466-215530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215626-215720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215797-215903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216462-216572:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216664-216744:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216818-216880:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217070-217136:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217228-217281:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217430-217536:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217610-217701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217792-217836:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:217906-217956:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:218030-218147:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:218405-218593:1:exon

AP4M1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: AP4M1
product: adaptor related protein complex 4 subunit mu 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775050.1
SIO_010081: AP4M1
subclass of: SO_0000673
so part of: AP4M1
location: join(215006..215078,215466..215530,215626..215720,215797..215903,215992..216088,216462..216572,216664..216744,216818..216880,217070..217136,217228..217281,217430..217536,217610..217701,217792..217836,217906..217956,218030..218147,218405..218785)
location: region:215006-218785:1
so has part: feature:215006-215078:1:exon
so has part: feature:215466-215530:1:exon
so has part: feature:215626-215720:1:exon
so has part: feature:215797-215903:1:exon
so has part: feature:215992-216088:1:exon
so has part: feature:216462-216572:1:exon
so has part: feature:216664-216744:1:exon
so has part: feature:216818-216880:1:exon
so has part: feature:217070-217136:1:exon
so has part: feature:217228-217281:1:exon
so has part: feature:217430-217536:1:exon
so has part: feature:217610-217701:1:exon
so has part: feature:217792-217836:1:exon
so has part: feature:217906-217956:1:exon
so has part: feature:218030-218147:1:exon
so has part: feature:218405-218785:1:exon

position:215006:1
position: 215006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215006-215078:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215466-215530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215626-215720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215797-215903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215992-216088:1:exon

position:215992:1
position: 215992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216088:1
position: 216088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:216462-216572:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216664-216744:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216818-216880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217070-217136:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217228-217281:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217430-217536:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217610-217701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:217792-217836:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:217906-217956:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:218030-218147:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:218405-218785:1:exon

AP4M1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: AP4M1
product: adaptor related protein complex 4 subunit mu 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775052.1
SIO_010081: AP4M1
subclass of: SO_0000673
so part of: AP4M1
location: join(215356..215530,215626..215720,215797..215903,215992..216088,216664..216744,216818..216880,217070..217136,217228..217281,217430..217536,217610..217701,217792..217836,217906..217956,218030..218147,218405..218785)
location: region:215356-218785:1
so has part: feature:215356-215530:1:exon
so has part: feature:215626-215720:1:exon
so has part: feature:215797-215903:1:exon
so has part: feature:215992-216088:1:exon
so has part: feature:216664-216744:1:exon
so has part: feature:216818-216880:1:exon
so has part: feature:217070-217136:1:exon
so has part: feature:217228-217281:1:exon
so has part: feature:217430-217536:1:exon
so has part: feature:217610-217701:1:exon
so has part: feature:217792-217836:1:exon
so has part: feature:217906-217956:1:exon
so has part: feature:218030-218147:1:exon
so has part: feature:218405-218785:1:exon

position:215356:1
position: 215356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215356-215530:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215626-215720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215797-215903:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215992-216088:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216664-216744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216818-216880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:217070-217136:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217228-217281:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217430-217536:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217610-217701:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217792-217836:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217906-217956:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:218030-218147:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:218405-218785:1:exon

AP4M1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: AP4M1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-4 complex subunit mu-1 isoform X1
translation: MLSQIFILSSKGDRLIHKDFRGETCGTSTDLADTFYRRITLLPGDQAPVFMAHEGRHFVHVRHAGLYFVATTTADASPFTLVEFLNRLVTLLRDFCGPLSEKNISLNFALIYELLDEMLDYGYVQTTAPEVLRNFMHMEPVATKPFSLLDLGSIGLFGAETQQSRVAPSSAASRPVLPPRGEQGTRNEVFVDVVERLTVVIAANGTPMKVDVQGEIRLKCYLPSCVEMRIGLTEEFCVGKSEVRGYGTAVRVDECAFHSSIKLDEFESGRVLKVTPSQGELTLMQYQLADDIPSPLPFRLFPTVDQDPTGRLRLYLKLRCDLPPKSQALNVRLQLPVPKGVSSLAQELSSPEQTAELQPGTKSIHWDIPRCQGGSQLSALFKLEVPGLSRASLLELGPANLAFELPAHTCSGLHVRFVRLPGPTGPPQRWVRYLTHSDSYVLRL
SIO_010081: AP4M1
subclass of: SO_0000673
so part of: AP4M1
location: join(215473..215530,215626..215720,215797..215903,215992..216088,216462..216572,216664..216744,216818..216880,217070..217136,217228..217281,217430..217536,217610..217701,217792..217836,217906..217956,218030..218147,218405..218593)
location: region:215473-218593:1
so has part: feature:215473-215530:1:exon
so has part: feature:215626-215720:1:exon
so has part: feature:215797-215903:1:exon
so has part: feature:215992-216088:1:exon
so has part: feature:216462-216572:1:exon
so has part: feature:216664-216744:1:exon
so has part: feature:216818-216880:1:exon
so has part: feature:217070-217136:1:exon
so has part: feature:217228-217281:1:exon
so has part: feature:217430-217536:1:exon
so has part: feature:217610-217701:1:exon
so has part: feature:217792-217836:1:exon
so has part: feature:217906-217956:1:exon
so has part: feature:218030-218147:1:exon
so has part: feature:218405-218593:1:exon

XP_052631010.1
type: Protein
SIO_000068: ncbiprotein

position:215473:1
position: 215473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215473-215530:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215626-215720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215797-215903:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215992-216088:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216462-216572:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216664-216744:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216818-216880:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217070-217136:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217228-217281:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217430-217536:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217610-217701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217792-217836:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:217906-217956:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:218030-218147:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:218405-218593:1:exon

AP4M1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: AP4M1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-4 complex subunit mu-1 isoform X3
translation: MLSQIFILSSKGDRLIHKDFRGETCGTSTDLADTFYRRITLLPGDQAPVFMAHEGRHFVHVRHAGLYFVATTTADASPFTLVEFLNRLVTLLRDFCGPLSEKNISLNFALIYELLDEMLFGAETQQSRVAPSSAASRPVLPPRGEQGTRNEVFVDVVERLTVVIAANGTPMKVDVQGEIRLKCYLPSCVEMRIGLTEEFCVGKSEVRGYGTAVRVDECAFHSSIKLDEFESGRVLKVTPSQGELTLMQYQLADDIPSPLPFRLFPTVDQDPTGRLRLYLKLRCDLPPKSQALNVRLQLPVPKGVSSLAQELSSPEQTAELQPGTKSIHWDIPRCQGGSQLSALFKLEVPGLSRASLLELGPANLAFELPAHTCSGLHVRFVRLPGPTGPPQRWVRYLTHSDSYVLRL
SIO_010081: AP4M1
subclass of: SO_0000673
so part of: AP4M1
location: join(215473..215530,215626..215720,215797..215903,215992..216088,216664..216744,216818..216880,217070..217136,217228..217281,217430..217536,217610..217701,217792..217836,217906..217956,218030..218147,218405..218593)
location: region:215473-218593:1
so has part: feature:215473-215530:1:exon
so has part: feature:215626-215720:1:exon
so has part: feature:215797-215903:1:exon
so has part: feature:215992-216088:1:exon
so has part: feature:216664-216744:1:exon
so has part: feature:216818-216880:1:exon
so has part: feature:217070-217136:1:exon
so has part: feature:217228-217281:1:exon
so has part: feature:217430-217536:1:exon
so has part: feature:217610-217701:1:exon
so has part: feature:217792-217836:1:exon
so has part: feature:217906-217956:1:exon
so has part: feature:218030-218147:1:exon
so has part: feature:218405-218593:1:exon

XP_052631012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215473-215530:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215626-215720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215797-215903:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215992-216088:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216664-216744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216818-216880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:217070-217136:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217228-217281:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217430-217536:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217610-217701:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217792-217836:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217906-217956:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:218030-218147:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:218405-218593:1:exon

STAG3
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: STAG3
note: stromal antigen 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(218678..228153)
location: region:218678-228153:-1
so has part: feature:218678-228153:-1:exon
subclass of: SO_0000010

128135968
type: Gene
SIO_000068: ncbigene

position:218678:-1
position: 218678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228153:-1
position: 228153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218678-228153:-1:exon

STAG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: STAG3
product: stromal antigen 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_052775044.1
SIO_010081: STAG3
subclass of: SO_0000673
so part of: STAG3
location: complement(join(218678..218817,218923..218985,219101..219185,219285..219320,219414..219564,219940..220124,220342..220470,220552..220697,221037..221344,221420..221600,221670..221762,221847..221927,221998..222085,222488..222558,222954..223154,223505..223594,223676..223765,223830..223933,224391..224502,224586..224685,225492..225599,225815..225894,225963..226061,226136..226259,226428..226501,226578..226729,226804..227008,227080..227156,227262..227358,227509..227625,227705..227798,227875..228153))
location: region:218678-228153:-1
so has part: feature:227875-228153:-1:exon
so has part: feature:227705-227798:-1:exon
so has part: feature:227509-227625:-1:exon
so has part: feature:227262-227358:-1:exon
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so has part: feature:226804-227008:-1:exon
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so has part: feature:226136-226259:-1:exon
so has part: feature:225963-226061:-1:exon
so has part: feature:225815-225894:-1:exon
so has part: feature:225492-225599:-1:exon
so has part: feature:224586-224685:-1:exon
so has part: feature:224391-224502:-1:exon
so has part: feature:223830-223933:-1:exon
so has part: feature:223676-223765:-1:exon
so has part: feature:223505-223594:-1:exon
so has part: feature:222954-223154:-1:exon
so has part: feature:222488-222558:-1:exon
so has part: feature:221998-222085:-1:exon
so has part: feature:221847-221927:-1:exon
so has part: feature:221670-221762:-1:exon
so has part: feature:221420-221600:-1:exon
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so has part: feature:220552-220697:-1:exon
so has part: feature:220342-220470:-1:exon
so has part: feature:219940-220124:-1:exon
so has part: feature:219414-219564:-1:exon
so has part: feature:219285-219320:-1:exon
so has part: feature:219101-219185:-1:exon
so has part: feature:218923-218985:-1:exon
so has part: feature:218678-218817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227875-228153:-1:exon

position:227875:-1
position: 227875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227705-227798:-1:exon

position:227705:-1
position: 227705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227798:-1
position: 227798
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:227509-227625:-1:exon

position:227509:-1
position: 227509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227625:-1
position: 227625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:227262-227358:-1:exon

position:227262:-1
position: 227262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227358:-1
position: 227358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:227080-227156:-1:exon

position:227080:-1
position: 227080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227156:-1
position: 227156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:226804-227008:-1:exon

position:226804:-1
position: 226804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227008:-1
position: 227008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:226578-226729:-1:exon

position:226578:-1
position: 226578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226729:-1
position: 226729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:226428-226501:-1:exon

position:226428:-1
position: 226428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226501:-1
position: 226501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:226136-226259:-1:exon

position:226136:-1
position: 226136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226259:-1
position: 226259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:225963-226061:-1:exon

position:225963:-1
position: 225963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226061:-1
position: 226061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:225815-225894:-1:exon

position:225815:-1
position: 225815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225894:-1
position: 225894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:225492-225599:-1:exon

position:225492:-1
position: 225492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225599:-1
position: 225599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:224586-224685:-1:exon

position:224586:-1
position: 224586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224685:-1
position: 224685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:224391-224502:-1:exon

position:224391:-1
position: 224391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224502:-1
position: 224502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:223830-223933:-1:exon

position:223830:-1
position: 223830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223933:-1
position: 223933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:223676-223765:-1:exon

position:223676:-1
position: 223676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223765:-1
position: 223765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:223505-223594:-1:exon

position:223505:-1
position: 223505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223594:-1
position: 223594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:222954-223154:-1:exon

position:222954:-1
position: 222954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223154:-1
position: 223154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:222488-222558:-1:exon

position:222488:-1
position: 222488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222558:-1
position: 222558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:221998-222085:-1:exon

position:221998:-1
position: 221998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222085:-1
position: 222085
reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:221847-221927:-1:exon

position:221847:-1
position: 221847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221927:-1
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:221670-221762:-1:exon

position:221670:-1
position: 221670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221762:-1
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reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:221420-221600:-1:exon

position:221420:-1
position: 221420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221600:-1
position: 221600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:221037-221344:-1:exon

position:221037:-1
position: 221037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221344:-1
position: 221344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:220552-220697:-1:exon

position:220552:-1
position: 220552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220697:-1
position: 220697
reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:220342-220470:-1:exon

position:220342:-1
position: 220342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220470:-1
position: 220470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:219940-220124:-1:exon

position:219940:-1
position: 219940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220124:-1
position: 220124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:219414-219564:-1:exon

position:219414:-1
position: 219414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219564:-1
position: 219564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:219285-219320:-1:exon

position:219285:-1
position: 219285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219320:-1
position: 219320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:219101-219185:-1:exon

position:219101:-1
position: 219101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219185:-1
position: 219185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:218923-218985:-1:exon

position:218923:-1
position: 218923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218985:-1
position: 218985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:218678-218817:-1:exon

position:218817:-1
position: 218817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STAG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: STAG3
product: stromal antigen 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
transcript id: XM_052775048.1
SIO_010081: STAG3
subclass of: SO_0000673
so part of: STAG3
location: complement(join(218704..218817,218923..218985,219101..219185,219285..219320,219414..219564,219940..220124,220342..220470,220552..220697,221037..221138,221217..221344,221420..221600,221670..221762,221847..221927,221998..222085,222488..222558,222954..223154,223505..223594,223676..223765,223830..223933,224391..224502,224586..224685,225492..225599,225815..225894,225963..226061,226136..226259,226428..226501,226578..226729,226804..227008,227080..227156,227262..227358,227509..227625,227705..227798,227875..228153))
location: region:218704-228153:-1
so has part: feature:227875-228153:-1:exon
so has part: feature:227705-227798:-1:exon
so has part: feature:227509-227625:-1:exon
so has part: feature:227262-227358:-1:exon
so has part: feature:227080-227156:-1:exon
so has part: feature:226804-227008:-1:exon
so has part: feature:226578-226729:-1:exon
so has part: feature:226428-226501:-1:exon
so has part: feature:226136-226259:-1:exon
so has part: feature:225963-226061:-1:exon
so has part: feature:225815-225894:-1:exon
so has part: feature:225492-225599:-1:exon
so has part: feature:224586-224685:-1:exon
so has part: feature:224391-224502:-1:exon
so has part: feature:223830-223933:-1:exon
so has part: feature:223676-223765:-1:exon
so has part: feature:223505-223594:-1:exon
so has part: feature:222954-223154:-1:exon
so has part: feature:222488-222558:-1:exon
so has part: feature:221998-222085:-1:exon
so has part: feature:221847-221927:-1:exon
so has part: feature:221670-221762:-1:exon
so has part: feature:221420-221600:-1:exon
so has part: feature:221217-221344:-1:exon
so has part: feature:221037-221138:-1:exon
so has part: feature:220552-220697:-1:exon
so has part: feature:220342-220470:-1:exon
so has part: feature:219940-220124:-1:exon
so has part: feature:219414-219564:-1:exon
so has part: feature:219285-219320:-1:exon
so has part: feature:219101-219185:-1:exon
so has part: feature:218923-218985:-1:exon
so has part: feature:218704-218817:-1:exon

position:218704:-1
position: 218704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227875-228153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227705-227798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227509-227625:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227262-227358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:227080-227156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226804-227008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226578-226729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226428-226501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226136-226259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225963-226061:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225815-225894:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225492-225599:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224586-224685:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:224391-224502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223830-223933:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223676-223765:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:223505-223594:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222954-223154:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:222488-222558:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221998-222085:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:221847-221927:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:221670-221762:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:221420-221600:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:221217-221344:-1:exon

position:221217:-1
position: 221217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:221037-221138:-1:exon

position:221138:-1
position: 221138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:220552-220697:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:220342-220470:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:219940-220124:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:219414-219564:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:219285-219320:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:219101-219185:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:218923-218985:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:218704-218817:-1:exon

STAG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: STAG3
product: stromal antigen 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_052775047.1
SIO_010081: STAG3
subclass of: SO_0000673
so part of: STAG3
location: complement(join(218704..218817,218923..218985,219101..219185,219414..219564,219940..220124,220342..220470,220552..220697,221037..221344,221420..221600,221670..221762,221847..221927,221998..222085,222488..222558,222954..223154,223505..223594,223676..223765,223830..223933,224391..224502,224586..224685,225492..225599,225815..225894,225963..226061,226136..226259,226428..226501,226578..226729,226804..227008,227080..227156,227262..227358,227509..227625,227705..227798,227875..228153))
location: region:218704-228153:-1
so has part: feature:227875-228153:-1:exon
so has part: feature:227705-227798:-1:exon
so has part: feature:227509-227625:-1:exon
so has part: feature:227262-227358:-1:exon
so has part: feature:227080-227156:-1:exon
so has part: feature:226804-227008:-1:exon
so has part: feature:226578-226729:-1:exon
so has part: feature:226428-226501:-1:exon
so has part: feature:226136-226259:-1:exon
so has part: feature:225963-226061:-1:exon
so has part: feature:225815-225894:-1:exon
so has part: feature:225492-225599:-1:exon
so has part: feature:224586-224685:-1:exon
so has part: feature:224391-224502:-1:exon
so has part: feature:223830-223933:-1:exon
so has part: feature:223676-223765:-1:exon
so has part: feature:223505-223594:-1:exon
so has part: feature:222954-223154:-1:exon
so has part: feature:222488-222558:-1:exon
so has part: feature:221998-222085:-1:exon
so has part: feature:221847-221927:-1:exon
so has part: feature:221670-221762:-1:exon
so has part: feature:221420-221600:-1:exon
so has part: feature:221037-221344:-1:exon
so has part: feature:220552-220697:-1:exon
so has part: feature:220342-220470:-1:exon
so has part: feature:219940-220124:-1:exon
so has part: feature:219414-219564:-1:exon
so has part: feature:219101-219185:-1:exon
so has part: feature:218923-218985:-1:exon
so has part: feature:218704-218817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227875-228153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227705-227798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227509-227625:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227262-227358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:227080-227156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226804-227008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226578-226729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226428-226501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226136-226259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225963-226061:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225815-225894:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225492-225599:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224586-224685:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:224391-224502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223830-223933:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223676-223765:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:223505-223594:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222954-223154:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:222488-222558:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221998-222085:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:221847-221927:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:221670-221762:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:221420-221600:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:221037-221344:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:220552-220697:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:220342-220470:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:219940-220124:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:219414-219564:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:219101-219185:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:218923-218985:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:218704-218817:-1:exon

STAG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: STAG3
product: stromal antigen 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_052775046.1
SIO_010081: STAG3
subclass of: SO_0000673
so part of: STAG3
location: complement(join(218704..218817,218923..218985,219101..219185,219285..219317,219414..219564,219940..220124,220342..220470,220552..220697,221037..221344,221420..221600,221670..221762,221847..221927,221998..222085,222488..222558,222954..223154,223505..223594,223676..223765,223830..223933,224391..224502,224586..224685,225492..225599,225815..225894,225963..226061,226136..226259,226428..226501,226578..226729,226804..227008,227080..227156,227262..227358,227509..227625,227705..227798,227875..228153))
location: region:218704-228153:-1
so has part: feature:227875-228153:-1:exon
so has part: feature:227705-227798:-1:exon
so has part: feature:227509-227625:-1:exon
so has part: feature:227262-227358:-1:exon
so has part: feature:227080-227156:-1:exon
so has part: feature:226804-227008:-1:exon
so has part: feature:226578-226729:-1:exon
so has part: feature:226428-226501:-1:exon
so has part: feature:226136-226259:-1:exon
so has part: feature:225963-226061:-1:exon
so has part: feature:225815-225894:-1:exon
so has part: feature:225492-225599:-1:exon
so has part: feature:224586-224685:-1:exon
so has part: feature:224391-224502:-1:exon
so has part: feature:223830-223933:-1:exon
so has part: feature:223676-223765:-1:exon
so has part: feature:223505-223594:-1:exon
so has part: feature:222954-223154:-1:exon
so has part: feature:222488-222558:-1:exon
so has part: feature:221998-222085:-1:exon
so has part: feature:221847-221927:-1:exon
so has part: feature:221670-221762:-1:exon
so has part: feature:221420-221600:-1:exon
so has part: feature:221037-221344:-1:exon
so has part: feature:220552-220697:-1:exon
so has part: feature:220342-220470:-1:exon
so has part: feature:219940-220124:-1:exon
so has part: feature:219414-219564:-1:exon
so has part: feature:219285-219317:-1:exon
so has part: feature:219101-219185:-1:exon
so has part: feature:218923-218985:-1:exon
so has part: feature:218704-218817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227875-228153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227705-227798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227509-227625:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227262-227358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:227080-227156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226804-227008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226578-226729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226428-226501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226136-226259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225963-226061:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225815-225894:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225492-225599:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224586-224685:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:224391-224502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223830-223933:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223676-223765:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:223505-223594:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222954-223154:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:222488-222558:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221998-222085:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:221847-221927:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:221670-221762:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:221420-221600:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:221037-221344:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:220552-220697:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:220342-220470:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:219940-220124:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:219414-219564:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:219285-219317:-1:exon

position:219317:-1
position: 219317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:219101-219185:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:218923-218985:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:218704-218817:-1:exon

STAG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: STAG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cohesin subunit SA-3 isoform X4
translation: MPPRRAARIQGTSSSSGSSAGLGTGSSPAPGSAGARSGSPPSPPAPDSPDLSSGDSGSDFEDTLRLRRKRRRRRGQSRGPVLKRPRRREPSGDGSSLAASNPEQNTLFEAVRSAKIAVETVVDDWLETYKQDRETGFLELVNFIIRSCGCRGVVTLKMFRHLQNSEIIQQLTEKFEEDSAEYPLSLGTQPWRCFRAAFCELVAAVVRRCQYSVVYDEFLMDALISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALGVSLHQENNQRQYEAERSKGPGRQATDKLEALLEKRRELQEQQEEIENMMNAIFKGIFVHRYRDVVPEIRAICMEELGTWMKSYTASFLTDGYLKYIGWTLHDKQREVRLQCVKALQGLYCHRDTAAHMELFTSRFKTRMVSMVLDKEPDVAVEVVKLLTLMLENTEEVLTEEDCQSVYPVVYVSSRALASAAGLFLYRRLLDPQREAGREPSRDGDNRTFFRLLLAFFIESELHEHAAYLVDSLWDCAGPRLRDWETISALLLEESPTKGLADRQEKALVEILAASVVQAAEGQPPVGRSLAKKPSARERKAQAEERIRLTHCLVPALPQLLAKFSADAEKAAPLLEVLRCFDLSIYCTGRLEKHLELVLGQLQEVVEKHTGQAVLEAASRALHALCDPELALHGRGDLVRSRLADQLADKFHQEVTELLQASSLDEEEVYSMAATLKRISILFNAHDLTPWQLFEPCTQLLQRALDTGEVPPQVLVPAITCLHFHILWELSHLPSTDVPQEQLQSLKTRVTSFCSLCQSCLSDVDAGVREQAFMVLSDLLLVFGPQLPRDGREALAPLVLLPDAGLQSQLAAFLMDHVFHHACSHEELSAMEDSENHIEELHQRRVLLAGFCKLIIYDVLELSAASDVFKHYAKFYSDYGDIIKETLNCTRQIDRQEWARTLLLSLQQLMTELLLQQGPEIRAAEAFLEIRDLARRFSLLFSLQQLRNRPALLSMHKEGIQFAFQEPPGPGPGLPPLNLPFLEVLSEFSPRLLRPDKALLLAYLEKMYQEQRWLAPQDVPWPSLVTYRNSLQPQEEGGSVNSRSTAPRPPPGSAAKRPRIDAPSEHPDSSPWLSSRLPSPALTSTVLRGGPRPPLTRPPARDPGSDPGLLQSSSLSHRRSGVNRLSLMVEEEEEEMMIEEESSEEDTPEQDRTLLAPEDQLRDLFDSTILGIEDV
SIO_010081: STAG3
subclass of: SO_0000673
so part of: STAG3
location: complement(join(218809..218817,218923..218985,219101..219185,219285..219320,219414..219564,219940..220124,220342..220470,220552..220697,221037..221138,221217..221344,221420..221600,221670..221762,221847..221927,221998..222085,222488..222558,222954..223154,223505..223594,223676..223765,223830..223933,224391..224502,224586..224685,225492..225599,225815..225894,225963..226061,226136..226259,226428..226501,226578..226729,226804..227008,227080..227156,227262..227358,227509..227625,227705..227798,227875..228020))
location: region:218809-228020:-1
so has part: feature:227875-228020:-1:exon
so has part: feature:227705-227798:-1:exon
so has part: feature:227509-227625:-1:exon
so has part: feature:227262-227358:-1:exon
so has part: feature:227080-227156:-1:exon
so has part: feature:226804-227008:-1:exon
so has part: feature:226578-226729:-1:exon
so has part: feature:226428-226501:-1:exon
so has part: feature:226136-226259:-1:exon
so has part: feature:225963-226061:-1:exon
so has part: feature:225815-225894:-1:exon
so has part: feature:225492-225599:-1:exon
so has part: feature:224586-224685:-1:exon
so has part: feature:224391-224502:-1:exon
so has part: feature:223830-223933:-1:exon
so has part: feature:223676-223765:-1:exon
so has part: feature:223505-223594:-1:exon
so has part: feature:222954-223154:-1:exon
so has part: feature:222488-222558:-1:exon
so has part: feature:221998-222085:-1:exon
so has part: feature:221847-221927:-1:exon
so has part: feature:221670-221762:-1:exon
so has part: feature:221420-221600:-1:exon
so has part: feature:221217-221344:-1:exon
so has part: feature:221037-221138:-1:exon
so has part: feature:220552-220697:-1:exon
so has part: feature:220342-220470:-1:exon
so has part: feature:219940-220124:-1:exon
so has part: feature:219414-219564:-1:exon
so has part: feature:219285-219320:-1:exon
so has part: feature:219101-219185:-1:exon
so has part: feature:218923-218985:-1:exon
so has part: feature:218809-218817:-1:exon

XP_052631008.1
type: Protein
SIO_000068: ncbiprotein

position:218809:-1
position: 218809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228020:-1
position: 228020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227875-228020:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227705-227798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227509-227625:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227262-227358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:227080-227156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226804-227008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226578-226729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226428-226501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226136-226259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225963-226061:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225815-225894:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225492-225599:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224586-224685:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:224391-224502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223830-223933:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223676-223765:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:223505-223594:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222954-223154:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:222488-222558:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221998-222085:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:221847-221927:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:221670-221762:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:221420-221600:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:221217-221344:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:221037-221138:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:220552-220697:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:220342-220470:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:219940-220124:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:219414-219564:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:219285-219320:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:219101-219185:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:218923-218985:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:218809-218817:-1:exon

STAG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: STAG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cohesin subunit SA-3 isoform X3
translation: MPPRRAARIQGTSSSSGSSAGLGTGSSPAPGSAGARSGSPPSPPAPDSPDLSSGDSGSDFEDTLRLRRKRRRRRGQSRGPVLKRPRRREPSGDGSSLAASNPEQNTLFEAVRSAKIAVETVVDDWLETYKQDRETGFLELVNFIIRSCGCRGVVTLKMFRHLQNSEIIQQLTEKFEEDSAEYPLSLGTQPWRCFRAAFCELVAAVVRRCQYSVVYDEFLMDALISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALGVSLHQENNQRQYEAERSKGPGRQATDKLEALLEKRRELQEQQEEIENMMNAIFKGIFVHRYRDVVPEIRAICMEELGTWMKSYTASFLTDGYLKYIGWTLHDKQREVRLQCVKALQGLYCHRDTAAHMELFTSRFKTRMVSMVLDKEPDVAVEVVKLLTLMLENTEEVLTEEDCQSVYPVVYVSSRALASAAGLFLYRRLLDPQREAGREPSRDGDNRTFFRLLLAFFIESELHEHAAYLVDSLWDCAGPRLRDWETISALLLEESPTKGLADRQEKALVEILAASVVQAAEGQPPVGRSLAKKPSARERKAQAEERIRLTHCLVPALPQLLAKFSADAEKAAPLLEVLRCFDLSIYCTGRLEKHLELVLGQLQEVVEKHTGQAVLEAASRALHALCDPELALHGRGDLVRSRLADQLADKFHQEVTELLQASSLDEEEVYSMAATLKRISILFNAHDLTPWQLFEPCTQLLQRALDTGEVPPQVLVPAITCLHFHILWELSHLPSTDVPQEQLQSLKTRVTSFCSLCQSCLSDVDAGVREQAFMVLSDLLLVFGPQLPRDGREALAPLVLLPDAGLQSQLAAFLMDHVFHHACSHEELSAMEDSENHIEELHQRRVLLAGFCKLIIYDVLELSAASDVFKHYAKVGGTQEACPAGPATAWGHQALSPPPQFYSDYGDIIKETLNCTRQIDRQEWARTLLLSLQQLMTELLLQQGPEIRAAEAFLEIRDLARRFSLLFSLQQLRNRPALLSMHKEGIQFAFQEPPGPGPGLPPLNLPFLEVLSEFSPRLLRPDKALLLAYLEKMYQEQRWLAPQDVPWPSLVTYRNSLQPQEEGGSVNSRSTAPRPPPGSAAKRPRIDAPSEHPDSSPWLSSRLPSPALTSTVLRGGPRPPLTRPPARDPGSDPGLLQRLSLMVEEEEEEMMIEEESSEEDTPEQDRTLLAPEDQLRDLFDSTILGIEDV
SIO_010081: STAG3
subclass of: SO_0000673
so part of: STAG3
location: complement(join(218809..218817,218923..218985,219101..219185,219414..219564,219940..220124,220342..220470,220552..220697,221037..221344,221420..221600,221670..221762,221847..221927,221998..222085,222488..222558,222954..223154,223505..223594,223676..223765,223830..223933,224391..224502,224586..224685,225492..225599,225815..225894,225963..226061,226136..226259,226428..226501,226578..226729,226804..227008,227080..227156,227262..227358,227509..227625,227705..227798,227875..228020))
location: region:218809-228020:-1
so has part: feature:227875-228020:-1:exon
so has part: feature:227705-227798:-1:exon
so has part: feature:227509-227625:-1:exon
so has part: feature:227262-227358:-1:exon
so has part: feature:227080-227156:-1:exon
so has part: feature:226804-227008:-1:exon
so has part: feature:226578-226729:-1:exon
so has part: feature:226428-226501:-1:exon
so has part: feature:226136-226259:-1:exon
so has part: feature:225963-226061:-1:exon
so has part: feature:225815-225894:-1:exon
so has part: feature:225492-225599:-1:exon
so has part: feature:224586-224685:-1:exon
so has part: feature:224391-224502:-1:exon
so has part: feature:223830-223933:-1:exon
so has part: feature:223676-223765:-1:exon
so has part: feature:223505-223594:-1:exon
so has part: feature:222954-223154:-1:exon
so has part: feature:222488-222558:-1:exon
so has part: feature:221998-222085:-1:exon
so has part: feature:221847-221927:-1:exon
so has part: feature:221670-221762:-1:exon
so has part: feature:221420-221600:-1:exon
so has part: feature:221037-221344:-1:exon
so has part: feature:220552-220697:-1:exon
so has part: feature:220342-220470:-1:exon
so has part: feature:219940-220124:-1:exon
so has part: feature:219414-219564:-1:exon
so has part: feature:219101-219185:-1:exon
so has part: feature:218923-218985:-1:exon
so has part: feature:218809-218817:-1:exon

XP_052631007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227875-228020:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227705-227798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227509-227625:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227262-227358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:227080-227156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226804-227008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226578-226729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226428-226501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226136-226259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225963-226061:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225815-225894:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225492-225599:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224586-224685:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:224391-224502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223830-223933:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223676-223765:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:223505-223594:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222954-223154:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:222488-222558:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221998-222085:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:221847-221927:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:221670-221762:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:221420-221600:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:221037-221344:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:220552-220697:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:220342-220470:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:219940-220124:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:219414-219564:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:219101-219185:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:218923-218985:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:218809-218817:-1:exon

STAG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: STAG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cohesin subunit SA-3 isoform X2
translation: MPPRRAARIQGTSSSSGSSAGLGTGSSPAPGSAGARSGSPPSPPAPDSPDLSSGDSGSDFEDTLRLRRKRRRRRGQSRGPVLKRPRRREPSGDGSSLAASNPEQNTLFEAVRSAKIAVETVVDDWLETYKQDRETGFLELVNFIIRSCGCRGVVTLKMFRHLQNSEIIQQLTEKFEEDSAEYPLSLGTQPWRCFRAAFCELVAAVVRRCQYSVVYDEFLMDALISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALGVSLHQENNQRQYEAERSKGPGRQATDKLEALLEKRRELQEQQEEIENMMNAIFKGIFVHRYRDVVPEIRAICMEELGTWMKSYTASFLTDGYLKYIGWTLHDKQREVRLQCVKALQGLYCHRDTAAHMELFTSRFKTRMVSMVLDKEPDVAVEVVKLLTLMLENTEEVLTEEDCQSVYPVVYVSSRALASAAGLFLYRRLLDPQREAGREPSRDGDNRTFFRLLLAFFIESELHEHAAYLVDSLWDCAGPRLRDWETISALLLEESPTKGLADRQEKALVEILAASVVQAAEGQPPVGRSLAKKPSARERKAQAEERIRLTHCLVPALPQLLAKFSADAEKAAPLLEVLRCFDLSIYCTGRLEKHLELVLGQLQEVVEKHTGQAVLEAASRALHALCDPELALHGRGDLVRSRLADQLADKFHQEVTELLQASSLDEEEVYSMAATLKRISILFNAHDLTPWQLFEPCTQLLQRALDTGEVPPQVLVPAITCLHFHILWELSHLPSTDVPQEQLQSLKTRVTSFCSLCQSCLSDVDAGVREQAFMVLSDLLLVFGPQLPRDGREALAPLVLLPDAGLQSQLAAFLMDHVFHHACSHEELSAMEDSENHIEELHQRRVLLAGFCKLIIYDVLELSAASDVFKHYAKVGGTQEACPAGPATAWGHQALSPPPQFYSDYGDIIKETLNCTRQIDRQEWARTLLLSLQQLMTELLLQQGPEIRAAEAFLEIRDLARRFSLLFSLQQLRNRPALLSMHKEGIQFAFQEPPGPGPGLPPLNLPFLEVLSEFSPRLLRPDKALLLAYLEKMYQEQRWLAPQDVPWPSLVTYRNSLQPQEEGGSVNSRSTAPRPPPGSAAKRPRIDAPSEHPDSSPWLSSRLPSPALTSTVLRGGPRPPLTRPPARDPGSDPGLLQSSLSHRRSGVNRLSLMVEEEEEEMMIEEESSEEDTPEQDRTLLAPEDQLRDLFDSTILGIEDV
SIO_010081: STAG3
subclass of: SO_0000673
so part of: STAG3
location: complement(join(218809..218817,218923..218985,219101..219185,219285..219317,219414..219564,219940..220124,220342..220470,220552..220697,221037..221344,221420..221600,221670..221762,221847..221927,221998..222085,222488..222558,222954..223154,223505..223594,223676..223765,223830..223933,224391..224502,224586..224685,225492..225599,225815..225894,225963..226061,226136..226259,226428..226501,226578..226729,226804..227008,227080..227156,227262..227358,227509..227625,227705..227798,227875..228020))
location: region:218809-228020:-1
so has part: feature:227875-228020:-1:exon
so has part: feature:227705-227798:-1:exon
so has part: feature:227509-227625:-1:exon
so has part: feature:227262-227358:-1:exon
so has part: feature:227080-227156:-1:exon
so has part: feature:226804-227008:-1:exon
so has part: feature:226578-226729:-1:exon
so has part: feature:226428-226501:-1:exon
so has part: feature:226136-226259:-1:exon
so has part: feature:225963-226061:-1:exon
so has part: feature:225815-225894:-1:exon
so has part: feature:225492-225599:-1:exon
so has part: feature:224586-224685:-1:exon
so has part: feature:224391-224502:-1:exon
so has part: feature:223830-223933:-1:exon
so has part: feature:223676-223765:-1:exon
so has part: feature:223505-223594:-1:exon
so has part: feature:222954-223154:-1:exon
so has part: feature:222488-222558:-1:exon
so has part: feature:221998-222085:-1:exon
so has part: feature:221847-221927:-1:exon
so has part: feature:221670-221762:-1:exon
so has part: feature:221420-221600:-1:exon
so has part: feature:221037-221344:-1:exon
so has part: feature:220552-220697:-1:exon
so has part: feature:220342-220470:-1:exon
so has part: feature:219940-220124:-1:exon
so has part: feature:219414-219564:-1:exon
so has part: feature:219285-219317:-1:exon
so has part: feature:219101-219185:-1:exon
so has part: feature:218923-218985:-1:exon
so has part: feature:218809-218817:-1:exon

XP_052631006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227875-228020:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227705-227798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227509-227625:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227262-227358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:227080-227156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226804-227008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226578-226729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226428-226501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226136-226259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225963-226061:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225815-225894:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225492-225599:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224586-224685:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:224391-224502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223830-223933:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223676-223765:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:223505-223594:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222954-223154:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:222488-222558:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221998-222085:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:221847-221927:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:221670-221762:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:221420-221600:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:221037-221344:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:220552-220697:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:220342-220470:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:219940-220124:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:219414-219564:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:219285-219317:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:219101-219185:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:218923-218985:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:218809-218817:-1:exon

STAG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: STAG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cohesin subunit SA-3 isoform X1
translation: MPPRRAARIQGTSSSSGSSAGLGTGSSPAPGSAGARSGSPPSPPAPDSPDLSSGDSGSDFEDTLRLRRKRRRRRGQSRGPVLKRPRRREPSGDGSSLAASNPEQNTLFEAVRSAKIAVETVVDDWLETYKQDRETGFLELVNFIIRSCGCRGVVTLKMFRHLQNSEIIQQLTEKFEEDSAEYPLSLGTQPWRCFRAAFCELVAAVVRRCQYSVVYDEFLMDALISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALGVSLHQENNQRQYEAERSKGPGRQATDKLEALLEKRRELQEQQEEIENMMNAIFKGIFVHRYRDVVPEIRAICMEELGTWMKSYTASFLTDGYLKYIGWTLHDKQREVRLQCVKALQGLYCHRDTAAHMELFTSRFKTRMVSMVLDKEPDVAVEVVKLLTLMLENTEEVLTEEDCQSVYPVVYVSSRALASAAGLFLYRRLLDPQREAGREPSRDGDNRTFFRLLLAFFIESELHEHAAYLVDSLWDCAGPRLRDWETISALLLEESPTKGLADRQEKALVEILAASVVQAAEGQPPVGRSLAKKPSARERKAQAEERIRLTHCLVPALPQLLAKFSADAEKAAPLLEVLRCFDLSIYCTGRLEKHLELVLGQLQEVVEKHTGQAVLEAASRALHALCDPELALHGRGDLVRSRLADQLADKFHQEVTELLQASSLDEEEVYSMAATLKRISILFNAHDLTPWQLFEPCTQLLQRALDTGEVPPQVLVPAITCLHFHILWELSHLPSTDVPQEQLQSLKTRVTSFCSLCQSCLSDVDAGVREQAFMVLSDLLLVFGPQLPRDGREALAPLVLLPDAGLQSQLAAFLMDHVFHHACSHEELSAMEDSENHIEELHQRRVLLAGFCKLIIYDVLELSAASDVFKHYAKVGGTQEACPAGPATAWGHQALSPPPQFYSDYGDIIKETLNCTRQIDRQEWARTLLLSLQQLMTELLLQQGPEIRAAEAFLEIRDLARRFSLLFSLQQLRNRPALLSMHKEGIQFAFQEPPGPGPGLPPLNLPFLEVLSEFSPRLLRPDKALLLAYLEKMYQEQRWLAPQDVPWPSLVTYRNSLQPQEEGGSVNSRSTAPRPPPGSAAKRPRIDAPSEHPDSSPWLSSRLPSPALTSTVLRGGPRPPLTRPPARDPGSDPGLLQSSSLSHRRSGVNRLSLMVEEEEEEMMIEEESSEEDTPEQDRTLLAPEDQLRDLFDSTILGIEDV
SIO_010081: STAG3
subclass of: SO_0000673
so part of: STAG3
location: complement(join(218809..218817,218923..218985,219101..219185,219285..219320,219414..219564,219940..220124,220342..220470,220552..220697,221037..221344,221420..221600,221670..221762,221847..221927,221998..222085,222488..222558,222954..223154,223505..223594,223676..223765,223830..223933,224391..224502,224586..224685,225492..225599,225815..225894,225963..226061,226136..226259,226428..226501,226578..226729,226804..227008,227080..227156,227262..227358,227509..227625,227705..227798,227875..228020))
location: region:218809-228020:-1
so has part: feature:227875-228020:-1:exon
so has part: feature:227705-227798:-1:exon
so has part: feature:227509-227625:-1:exon
so has part: feature:227262-227358:-1:exon
so has part: feature:227080-227156:-1:exon
so has part: feature:226804-227008:-1:exon
so has part: feature:226578-226729:-1:exon
so has part: feature:226428-226501:-1:exon
so has part: feature:226136-226259:-1:exon
so has part: feature:225963-226061:-1:exon
so has part: feature:225815-225894:-1:exon
so has part: feature:225492-225599:-1:exon
so has part: feature:224586-224685:-1:exon
so has part: feature:224391-224502:-1:exon
so has part: feature:223830-223933:-1:exon
so has part: feature:223676-223765:-1:exon
so has part: feature:223505-223594:-1:exon
so has part: feature:222954-223154:-1:exon
so has part: feature:222488-222558:-1:exon
so has part: feature:221998-222085:-1:exon
so has part: feature:221847-221927:-1:exon
so has part: feature:221670-221762:-1:exon
so has part: feature:221420-221600:-1:exon
so has part: feature:221037-221344:-1:exon
so has part: feature:220552-220697:-1:exon
so has part: feature:220342-220470:-1:exon
so has part: feature:219940-220124:-1:exon
so has part: feature:219414-219564:-1:exon
so has part: feature:219285-219320:-1:exon
so has part: feature:219101-219185:-1:exon
so has part: feature:218923-218985:-1:exon
so has part: feature:218809-218817:-1:exon

XP_052631004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227875-228020:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227705-227798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227509-227625:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227262-227358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:227080-227156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226804-227008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226578-226729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226428-226501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226136-226259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225963-226061:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225815-225894:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225492-225599:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224586-224685:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:224391-224502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223830-223933:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223676-223765:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:223505-223594:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222954-223154:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:222488-222558:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221998-222085:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:221847-221927:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:221670-221762:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:221420-221600:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:221037-221344:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:220552-220697:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:220342-220470:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:219940-220124:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:219414-219564:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:219285-219320:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:219101-219185:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:218923-218985:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:218809-218817:-1:exon

GAL3ST4
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: GAL3ST4
note: galactose-3-O-sulfotransferase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 229203..233349
location: region:229203-233349:1
so has part: feature:229203-233349:1:exon
subclass of: SO_0000010

128135986
type: Gene
SIO_000068: ncbigene

position:229203:1
position: 229203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233349:1
position: 233349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229203-233349:1:exon

GAL3ST4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: GAL3ST4
product: galactose-3-O-sulfotransferase 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775074.1
SIO_010081: GAL3ST4
subclass of: SO_0000673
so part of: GAL3ST4
location: join(229203..229612,230774..230887,231181..231448,231913..233349)
location: region:229203-233349:1
so has part: feature:229203-229612:1:exon
so has part: feature:230774-230887:1:exon
so has part: feature:231181-231448:1:exon
so has part: feature:231913-233349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229203-229612:1:exon

position:229612:1
position: 229612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:230774-230887:1:exon

position:230774:1
position: 230774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230887:1
position: 230887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:231181-231448:1:exon

position:231181:1
position: 231181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231448:1
position: 231448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:231913-233349:1:exon

position:231913:1
position: 231913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GAL3ST4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: GAL3ST4
product: galactose-3-O-sulfotransferase 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775073.1
SIO_010081: GAL3ST4
subclass of: SO_0000673
so part of: GAL3ST4
location: join(230443..230887,231181..231448,231913..233349)
location: region:230443-233349:1
so has part: feature:230443-230887:1:exon
so has part: feature:231181-231448:1:exon
so has part: feature:231913-233349:1:exon

position:230443:1
position: 230443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230443-230887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231181-231448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231913-233349:1:exon

GAL3ST4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: GAL3ST4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactose-3-O-sulfotransferase 4 isoform X1
translation: MLGSPEPPCPRRRMKLPPACCRLQTLGAALGVCVTIGFTVQLLGGPFQRRAPVAPAGRPPAPCQPRTHLVFLKTHKTGGSSVVNLLHRFGEARGLRFALPHRYQFGYPSPFRAERVKGYRPGGPPFDIICHHMRFNLTEVQKVMPNDSFYFSIVRDPGTLGESAFAYYRAVAPAFRRAPSLAAFLAAPGRFYEAGARGNHYARNLQWFDFGLPAAEDGAAVEAALAGLERAFSLVLLAEHFDESLVLLREALCWPEEAVAAFAHNGRPAGDGPRVSPAQAARLRAWNSLDWALYAHLNRSFWRRAEAFGAARLREEVARLRQRRAALAHHCLQGGGPLPARAIPDGRLRPFQPPGRAQILGYALRAGLPPTERERCARLATPELQYKDILDRRQFGGGNASVPPGG
SIO_010081: GAL3ST4
subclass of: SO_0000673
so part of: GAL3ST4
location: join(230739..230887,231181..231448,231913..232716)
location: region:230739-232716:1
so has part: feature:230739-230887:1:exon
so has part: feature:231181-231448:1:exon
so has part: feature:231913-232716:1:exon

XP_052631033.1
type: Protein
SIO_000068: ncbiprotein

position:230739:1
position: 230739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232716:1
position: 232716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230739-230887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231181-231448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231913-232716:1:exon

GAL3ST4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: GAL3ST4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactose-3-O-sulfotransferase 4 isoform X2
translation: MKLPPACCRLQTLGAALGVCVTIGFTVQLLGGPFQRRAPVAPAGRPPAPCQPRTHLVFLKTHKTGGSSVVNLLHRFGEARGLRFALPHRYQFGYPSPFRAERVKGYRPGGPPFDIICHHMRFNLTEVQKVMPNDSFYFSIVRDPGTLGESAFAYYRAVAPAFRRAPSLAAFLAAPGRFYEAGARGNHYARNLQWFDFGLPAAEDGAAVEAALAGLERAFSLVLLAEHFDESLVLLREALCWPEEAVAAFAHNGRPAGDGPRVSPAQAARLRAWNSLDWALYAHLNRSFWRRAEAFGAARLREEVARLRQRRAALAHHCLQGGGPLPARAIPDGRLRPFQPPGRAQILGYALRAGLPPTERERCARLATPELQYKDILDRRQFGGGNASVPPGG
SIO_010081: GAL3ST4
subclass of: SO_0000673
so part of: GAL3ST4
location: join(230778..230887,231181..231448,231913..232716)
location: region:230778-232716:1
so has part: feature:230778-230887:1:exon
so has part: feature:231181-231448:1:exon
so has part: feature:231913-232716:1:exon

XP_052631034.1
type: Protein
SIO_000068: ncbiprotein

position:230778:1
position: 230778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230778-230887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231181-231448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231913-232716:1:exon

TRAPPC14
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: TRAPPC14
note: trafficking protein particle complex subunit 14; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 233531..238584
location: region:233531-238584:1
so has part: feature:233531-238584:1:exon
subclass of: SO_0000010

128135979
type: Gene
SIO_000068: ncbigene

position:233531:1
position: 233531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238584:1
position: 238584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233531-238584:1:exon

TRAPPC14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: TRAPPC14
product: trafficking protein particle complex subunit 14
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775063.1
SIO_010081: TRAPPC14
subclass of: SO_0000673
so part of: TRAPPC14
location: join(233531..234349,234629..234724,235148..235280,235358..235444,235604..235724,235929..236076,236441..236523,236791..236954,237168..237322,237403..237596,237844..238584)
location: region:233531-238584:1
so has part: feature:233531-234349:1:exon
so has part: feature:234629-234724:1:exon
so has part: feature:235148-235280:1:exon
so has part: feature:235358-235444:1:exon
so has part: feature:235604-235724:1:exon
so has part: feature:235929-236076:1:exon
so has part: feature:236441-236523:1:exon
so has part: feature:236791-236954:1:exon
so has part: feature:237168-237322:1:exon
so has part: feature:237403-237596:1:exon
so has part: feature:237844-238584:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:233531-234349:1:exon

position:234349:1
position: 234349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:234629-234724:1:exon

position:234629:1
position: 234629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234724:1
position: 234724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:235148-235280:1:exon

position:235148:1
position: 235148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235280:1
position: 235280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:235358-235444:1:exon

position:235358:1
position: 235358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235444:1
position: 235444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:235604-235724:1:exon

position:235604:1
position: 235604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235724:1
position: 235724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:235929-236076:1:exon

position:235929:1
position: 235929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236076:1
position: 236076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:236441-236523:1:exon

position:236441:1
position: 236441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236523:1
position: 236523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:236791-236954:1:exon

position:236791:1
position: 236791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236954:1
position: 236954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:237168-237322:1:exon

position:237168:1
position: 237168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237322:1
position: 237322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:237403-237596:1:exon

position:237403:1
position: 237403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237596:1
position: 237596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:237844-238584:1:exon

position:237844:1
position: 237844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRAPPC14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: TRAPPC14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 14
translation: MESQCDYFMYFPAVPFAARELLSGEPGRYRALPRRNHLYLGETVRFLLVLRCRPGSGGGTGPGRPPWAELAASLAALASVSPGGTEASGDRDGDGDPDGTGDGTGSGASPEPTVFRDCRALLTHSQGPPGRPAAGIPVEDPIVSTDEVIFPLTISLDKLPPGTVKAKIVVTVWKRDTEPPELQEGGGYLSLLQTRAPAHVFRQEQGAFKAQVSTLLTVLPPPVVRCRQLTVSGKYLTVLKVLNGWSQEEISLWDVQILPNFNASYLPVMPDGSVLLVDDVCHHSGEVPVGAFCRMAGAGSACPCALSALEEHNFLFQLQAPERPPEDAKEGLEVPLVAVIQWSTPKLPFTSSIYTHYRLPSIRLERPRFVMTAACESPVRARQRFTVTYTLLNDLQDFLAVRLVWTPETATAGKKLSGEERRATQAALDAIVCHTPLNNLGYSRKGSALTIRVAFQALRAGLFEMSQHMKLKLQFTASVANPPPEARPVSRKSSPSSPAVRDLVERHQAGLGRSQSFSHQQPSRSHLMRSGSVMERRAITPPVGSPVGRPLYLPSEKTVLSLDKIAKRECKVLVVEPVK
SIO_010081: TRAPPC14
subclass of: SO_0000673
so part of: TRAPPC14
location: join(233945..234349,234629..234724,235148..235280,235358..235444,235604..235724,235929..236076,236441..236523,236791..236954,237168..237322,237403..237596,237844..237997)
location: region:233945-237997:1
so has part: feature:233945-234349:1:exon
so has part: feature:234629-234724:1:exon
so has part: feature:235148-235280:1:exon
so has part: feature:235358-235444:1:exon
so has part: feature:235604-235724:1:exon
so has part: feature:235929-236076:1:exon
so has part: feature:236441-236523:1:exon
so has part: feature:236791-236954:1:exon
so has part: feature:237168-237322:1:exon
so has part: feature:237403-237596:1:exon
so has part: feature:237844-237997:1:exon

XP_052631023.1
type: Protein
SIO_000068: ncbiprotein

position:233945:1
position: 233945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237997:1
position: 237997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233945-234349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234629-234724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235148-235280:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235358-235444:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235604-235724:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:235929-236076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236441-236523:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236791-236954:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237168-237322:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:237403-237596:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:237844-237997:1:exon

LAMTOR4
type: Gene
subclass of: SO_0000704
RO_0002162: 202280
gene: LAMTOR4
note: late endosomal/lysosomal adaptor, MAPK and MTOR activator 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(238764..240746)
location: region:238764-240746:-1
so has part: feature:238764-240746:-1:exon
subclass of: SO_0000010

128135980
type: Gene
SIO_000068: ncbigene

position:238764:-1
position: 238764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240746:-1
position: 240746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238764-240746:-1:exon

LAMTOR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LAMTOR4
product: late endosomal/lysosomal adaptor, MAPK and MTOR activator 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775064.1
SIO_010081: LAMTOR4
subclass of: SO_0000673
so part of: LAMTOR4
location: complement(join(238764..239149,240060..240140,240359..240746))
location: region:238764-240746:-1
so has part: feature:240359-240746:-1:exon
so has part: feature:240060-240140:-1:exon
so has part: feature:238764-239149:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240359-240746:-1:exon

position:240359:-1
position: 240359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240060-240140:-1:exon

position:240060:-1
position: 240060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240140:-1
position: 240140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:238764-239149:-1:exon

position:239149:-1
position: 239149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAMTOR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LAMTOR4
product: late endosomal/lysosomal adaptor, MAPK and MTOR activator 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775065.1
SIO_010081: LAMTOR4
subclass of: SO_0000673
so part of: LAMTOR4
location: complement(join(238764..239149,239595..239712,240060..240140,240359..240486))
location: region:238764-240486:-1
so has part: feature:240359-240486:-1:exon
so has part: feature:240060-240140:-1:exon
so has part: feature:239595-239712:-1:exon
so has part: feature:238764-239149:-1:exon

position:240486:-1
position: 240486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240359-240486:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240060-240140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239595-239712:-1:exon

position:239595:-1
position: 239595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239712:-1
position: 239712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:238764-239149:-1:exon

LAMTOR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 202280
gene: LAMTOR4
product: late endosomal/lysosomal adaptor, MAPK and MTOR activator 4, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_052775066.1
SIO_010081: LAMTOR4
subclass of: SO_0000673
so part of: LAMTOR4
location: complement(join(238764..239149,239595..239712,240060..240161,240370..240420))
location: region:238764-240420:-1
so has part: feature:240370-240420:-1:exon
so has part: feature:240060-240161:-1:exon
so has part: feature:239595-239712:-1:exon
so has part: feature:238764-239149:-1:exon

position:240420:-1
position: 240420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240370-240420:-1:exon

position:240370:-1
position: 240370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240060-240161:-1:exon

position:240161:-1
position: 240161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:239595-239712:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:238764-239149:-1:exon

LAMTOR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LAMTOR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ragulator complex protein LAMTOR4 isoform X1
translation: MVTLRPPPGRGPRPAAAGPIEAAGPPRRAGSVDGRGPVVPRGRRLPLCKYKPDYLPARKRSGRALSHHVLSQPAPTGGRADGGGTRGASRGKRGGPMTGGTLRQWGGGAGRGGHLTGSAPERRHDHGADPGAGAHPGPAGLPGHQRWGRAGVVFGEHSLLVTVSGQKLFVVKRQNHVQEPVAV
SIO_010081: LAMTOR4
subclass of: SO_0000673
so part of: LAMTOR4
location: complement(join(239052..239149,240060..240140,240359..240731))
location: region:239052-240731:-1
so has part: feature:240359-240731:-1:exon
so has part: feature:240060-240140:-1:exon
so has part: feature:239052-239149:-1:exon

XP_052631024.1
type: Protein
SIO_000068: ncbiprotein

position:239052:-1
position: 239052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240731:-1
position: 240731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240359-240731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240060-240140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239052-239149:-1:exon

LAMTOR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LAMTOR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ragulator complex protein LAMTOR4 isoform X3
translation: MGRRGGARRSPDRVGAGDTPRCPQTTALTQGLERIPDQLGYLVISDGAVLASSGDLENDEQTAAILSELVATACGLRLQRGHDPPFKRLSVVFGEHSLLVTVSGQKLFVVKRQNHVQEPVAV
SIO_010081: LAMTOR4
subclass of: SO_0000673
so part of: LAMTOR4
location: complement(join(239052..239149,239595..239712,240060..240161,240370..240420))
location: region:239052-240420:-1
so has part: feature:240370-240420:-1:exon
so has part: feature:240060-240161:-1:exon
so has part: feature:239595-239712:-1:exon
so has part: feature:239052-239149:-1:exon

XP_052631026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240370-240420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240060-240161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239595-239712:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239052-239149:-1:exon

LAMTOR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 202280
gene: LAMTOR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ragulator complex protein LAMTOR4 isoform X2
translation: MTTALTQGLERIPDQLGYLVISDGAVLASSGDLENDEQTAAILSELVATACGLRLQRGHDPPFKRLSVVFGEHSLLVTVSGQKLFVVKRQNHVQEPVAV
SIO_010081: LAMTOR4
subclass of: SO_0000673
so part of: LAMTOR4
location: complement(join(239052..239149,239595..239712,240060..240140,240359..240361))
location: region:239052-240361:-1
so has part: feature:240359-240361:-1:exon
so has part: feature:240060-240140:-1:exon
so has part: feature:239595-239712:-1:exon
so has part: feature:239052-239149:-1:exon

XP_052631025.1
type: Protein
SIO_000068: ncbiprotein

position:240361:-1
position: 240361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240359-240361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240060-240140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239595-239712:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239052-239149:-1:exon