Streptococcus respiraculi strain HTS25 plasmid unnamed1, complete sequence.
Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.
Streptococcus sp. nov. HTS25 was isolated from animal
Submitted (31-JUL-2017) National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping, Changbai Road 155, Beijing, Beijing 102206, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP022681.1.\nSource bacteria available from the National Institute for\nCommunicable Disease Control and Prevention, Chinese Center for\nDisease Control and Prevention, State Key Laboratory of Infectious\nDisease Prevention and Control, Changping, Changbai Road 155,\nBeijing, Beijing 102206, China.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SOAPdenovo v. 2.0\nGenome Coverage :: 100\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/23/2023 03:14:03\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,994\nCDSs (total) :: 1,922\nGenes (coding) :: 1,888\nCDSs (with protein) :: 1,888\nGenes (RNA) :: 72\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 56\nncRNAs :: 4\nPseudo Genes (total) :: 34\nCDSs (without protein) :: 34\nPseudo Genes (ambiguous residues) :: 0 of 34\nPseudo Genes (frameshifted) :: 18 of 34\nPseudo Genes (incomplete) :: 18 of 34\nPseudo Genes (internal stop) :: 12 of 34\nPseudo Genes (multiple problems) :: 11 of 34\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Streptococcus respiraculi
COORDINATES: similar to AA sequence:RefSeq:WP_000224694.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_009732634.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR01665.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016032 - viral process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015977394.1
COORDINATES: similar to AA sequence:RefSeq:WP_015728847.1
GO:0140911 - pore-forming activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000405194.1
peptidoglycan amidohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019291329.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000429593.1
COORDINATES: similar to AA sequence:RefSeq:WP_003039114.1
COORDINATES: similar to AA sequence:RefSeq:WP_001157160.1
COORDINATES: protein motif:HMM:NF019106.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000274132.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011054591.1
COORDINATES: similar to AA sequence:RefSeq:WP_016251384.1
COORDINATES: similar to AA sequence:RefSeq:WP_001148046.1
COORDINATES: similar to AA sequence:RefSeq:WP_001106784.1
COORDINATES: similar to AA sequence:RefSeq:WP_000998974.1
COORDINATES: similar to AA sequence:RefSeq:WP_001056933.1
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000005659.1
phage replisome organizer N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000470297.1
COORDINATES: similar to AA sequence:RefSeq:WP_002261867.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006151492.1
COORDINATES: protein motif:HMM:NF019467.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_002936906.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
ArpU family phage packaging/lysis transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_000754954.1
COORDINATES: similar to AA sequence:RefSeq:WP_003074821.1
HNH endonuclease signature motif containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000172765.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_000426640.1
COORDINATES: protein motif:HMM:NF026880.2
COORDINATES: similar to AA sequence:RefSeq:WP_002922570.1