Enterococcus wangshanyuanii strain MN05 plasmid unnamed2.
type: Entry
definition: Enterococcus wangshanyuanii strain MN05 plasmid unnamed2.
sequence version: NZ_CP021875.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_CP021875.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN07171652
keyword: RefSeq
source: Enterococcus wangshanyuanii
organism: Enterococcus wangshanyuanii
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.
reference: 1
references: 29072561
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP021875.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 2016\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 200.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 06:30:24\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,214\nCDSs (total) :: 4,138\nGenes (coding) :: 4,106\nCDSs (with protein) :: 4,106\nGenes (RNA) :: 76\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 60\nncRNAs :: 4\nPseudo Genes (total) :: 32\nCDSs (without protein) :: 32\nPseudo Genes (ambiguous residues) :: 0 of 32\nPseudo Genes (frameshifted) :: 9 of 32\nPseudo Genes (incomplete) :: 16 of 32\nPseudo Genes (internal stop) :: 11 of 32\nPseudo Genes (multiple problems) :: 3 of 32\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 30412
topology: linear
so has quality: SO_0000987
location: 1..30412
location: region:1-30412:1
RO_0002162: 2005703

NZ_CP021875
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN07171652
type: BioSample
SIO_000068: biosample

1
title: Enterococcus wangshanyuanii sp. nov., isolated from faeces of yaks (Bos grunniens)
author: Jin, D.
author: Yang, J.
author: Lu, S.
author: Lai, X.H.
author: Xiong, Y.
author: Xu, J.
journal: Int J Syst Evol Microbiol
volume: 67
issue: 12
pages: 5216-5221
year: 2017
pubmed: 29072561

29072561
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Jin, D.
journal: Submitted (30-MAY-2017) National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, No. 155, Changbai Road, Changping, Beijing 102206, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30412:1
position: 30412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-30412:1:source
so part of: sequence
organism: Enterococcus wangshanyuanii
mol type: genomic DNA
strain: MN05
isolation source: fecal sample
host: Bos grunniens
type material: type strain of Enterococcus wangshanyuanii
plasmid: unnamed2
country: China
collection date: 2016

2005703
type: Taxonomy
SIO_000068: taxonomy

CC204_RS19225
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19225
so part of: sequence
location: complement(131..1126)
location: region:131-1126:-1
so has part: feature:131-1126:-1:exon
subclass of: SO_0000010

position:131:-1
position: 131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126:-1
position: 1126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131-1126:-1:exon

CC204_RS19225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19225
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: leucine-rich repeat domain-containing protein
translation: MKRTKILSYTTMITLLAPAIIGVHQAYADTVTSTTAETEEMLETTATTESSSMESTTETTLEQTEASSSEELTLDSVDTEIEEPMIDSSVQQDIQVPAVANAQLIGQTYADIFPDENLRKAIMEQLGATSEAETIEQYQIDKTSTIWIQDKNISNLEGIQVFQRLHDLNIYQNPISDISVLSQFPLLKYLRCGGTKITDFSALGGLKNLEWLELGRTAATSLESVANITSLKSLFFNDSPAINDLSPLENLVNLEVVSAQYCGVTDISPLGKLPNLKKYYVNAKIELPVRTPLNNVLTVPISDVQVIDIDGSVGVFENYVPNIDSGVSGPN
SIO_010081: CC204_RS19225
subclass of: SO_0000673
so part of: CC204_RS19225
location: complement(131..1126)
location: region:131-1126:-1
so has part: feature:131-1126:-1:exon

WP_088271768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131-1126:-1:exon

CC204_RS19230
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19230
pseudo: true
so part of: sequence
location: complement(1157..>1540)
location: region:1157-1540:-1
so has part: feature:1157-1540:-1:exon
subclass of: SO_0000010

position:1157:-1
position: 1157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1540:-1
position: 1540
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1157-1540:-1:exon

CC204_RS19230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016617854.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: CHAP domain-containing protein
SIO_010081: CC204_RS19230
subclass of: SO_0000673
so part of: CC204_RS19230
location: complement(1157..>1540)
location: region:1157-1540:-1
so has part: feature:1157-1540:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1157-1540:-1:exon

CC204_RS19235
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
gene: ltrA
locus tag: CC204_RS19235
pseudo: true
so part of: sequence
location: complement(1684..3454)
location: region:1684-3454:-1
so has part: feature:1684-3454:-1:exon
subclass of: SO_0000010

position:1684:-1
position: 1684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3454:-1
position: 3454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1684-3454:-1:exon

CC204_RS19235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
gene: ltrA
locus tag: CC204_RS19235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002362292.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
SIO_010081: CC204_RS19235
subclass of: SO_0000673
so part of: CC204_RS19235
location: complement(1684..3454)
location: region:1684-3454:-1
so has part: feature:1684-3454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1684-3454:-1:exon

CC204_RS21600
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS21600
so part of: sequence
location: complement(4416..4628)
location: region:4416-4628:-1
so has part: feature:4416-4628:-1:exon
subclass of: SO_0000010

position:4416:-1
position: 4416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4628:-1
position: 4628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4416-4628:-1:exon

CC204_RS21600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS21600
inference: COORDINATES: protein motif:HMM:NF013954.2
GO function: GO:0004040 - amidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucosaminidase domain-containing protein
translation: MGEPARKIGQETNLFASVMIAQAILESGSGGSQLSQEPYNNLFGIKGEFEGQSGDPTDVGRRPDQETTFY
SIO_010081: CC204_RS21600
subclass of: SO_0000673
so part of: CC204_RS21600
location: complement(4416..4628)
location: region:4416-4628:-1
so has part: feature:4416-4628:-1:exon

WP_088271770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4416-4628:-1:exon

CC204_RS19245
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19245
so part of: sequence
location: complement(4734..4997)
location: region:4734-4997:-1
so has part: feature:4734-4997:-1:exon
subclass of: SO_0000010

position:4734:-1
position: 4734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4997:-1
position: 4997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4734-4997:-1:exon

CC204_RS19245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19245
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFAEEINQEITIGSNKPIEVPEETSTSGSATQESFSQPETSTTQELAQESQTTDRTESSNETTPSEIPVQVETNRNTTRGTNGRSS
SIO_010081: CC204_RS19245
subclass of: SO_0000673
so part of: CC204_RS19245
location: complement(4734..4997)
location: region:4734-4997:-1
so has part: feature:4734-4997:-1:exon

WP_088271771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4734-4997:-1:exon

CC204_RS21245
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS21245
so part of: sequence
location: complement(5144..5281)
location: region:5144-5281:-1
so has part: feature:5144-5281:-1:exon
subclass of: SO_0000010

position:5144:-1
position: 5144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5281:-1
position: 5281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5144-5281:-1:exon

CC204_RS21245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS21245
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTAETGNQVIERISFLEKSNHQYHCLLEQKKNRLSAVRRRKIGK
SIO_010081: CC204_RS21245
subclass of: SO_0000673
so part of: CC204_RS21245
location: complement(5144..5281)
location: region:5144-5281:-1
so has part: feature:5144-5281:-1:exon

WP_157894326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5144-5281:-1:exon

CC204_RS21250
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS21250
so part of: sequence
location: complement(5953..6105)
location: region:5953-6105:-1
so has part: feature:5953-6105:-1:exon
subclass of: SO_0000010

position:5953:-1
position: 5953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6105:-1
position: 6105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5953-6105:-1:exon

CC204_RS21250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS21250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVDYTVVDKEMTERAIAEYDYKKDPKATPNTRWYFSEDGYDKDGKKDTGA
SIO_010081: CC204_RS21250
subclass of: SO_0000673
so part of: CC204_RS21250
location: complement(5953..6105)
location: region:5953-6105:-1
so has part: feature:5953-6105:-1:exon

WP_162288379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5953-6105:-1:exon

CC204_RS19255
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19255
so part of: sequence
location: complement(6098..7312)
location: region:6098-7312:-1
so has part: feature:6098-7312:-1:exon
subclass of: SO_0000010

position:6098:-1
position: 6098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7312:-1
position: 7312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6098-7312:-1:exon

CC204_RS19255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19255
inference: COORDINATES: protein motif:HMM:NF037639.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SpaA isopeptide-forming pilin-related protein
translation: MKDPLKEENVQATFFARQGKFKLKKTSEISNLPMSEVGFKVTMSTGEVLELESNENGETPESKDFDFGTTGEVTEVKTPAGYVKLASPIKFTIEAGTTIEVAIENKIQKGKFTFQKFEEVYNPQATWDAGKPMYDRNPAANREFDLVRVNDHTLPDGKTIVDKAGEVVDHIVTDKDGNGSSNVELFIGSQNKYKLVETNTPENYRDPSDIQTEFSIPYGNNTEKLVLFDQGEIDNELKTVNLTFNKKNALDLAGLNLTGAQFLVQGLTNDVKFMFTTESTSTLLKLLADKGTATYSFTEVKRPDGFDLVPGTTDTRIVTVTEGKDMTIDWENMPKAQKVGISTQAHTGDGSSQTFVWGEDATFYDDSNLTHENIPNGTKRKKEVKLHADYEDGTSAIVLEIRCG
SIO_010081: CC204_RS19255
subclass of: SO_0000673
so part of: CC204_RS19255
location: complement(6098..7312)
location: region:6098-7312:-1
so has part: feature:6098-7312:-1:exon

WP_088271772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6098-7312:-1:exon

CC204_RS19260
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19260
so part of: sequence
location: complement(7405..8385)
location: region:7405-8385:-1
so has part: feature:7405-8385:-1:exon
subclass of: SO_0000010

position:7405:-1
position: 7405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8385:-1
position: 8385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7405-8385:-1:exon

CC204_RS19260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKINKVFSKCATVLTTAMVLGQVALTPIQALATEGTPSTEDTSSKETIESTTEETSSATAESTEENESTQEVQIPEVTIAPPINNAIDNFLASQPLVSSGFTADGDQITFNQRMNSLFREIGNSTGKLTKYYSSTAYISTPYIDIVGEDNGAVWCIKPDSPFPVNVEYAKSIYNDEGVVNILYYAVKNGWDQPNENYVDVFVALNAYLGHSYQGVDLNMPVFTSDPNVAFLLQKAKDKDAPTGNFSIKNKIQTAGFDRNTKKQITDWYTPETDGQNVTYDIPTNDFDKEVTVELDNGQTFSSQSGTKTIPANVKFRLIAPANYTKN
SIO_010081: CC204_RS19260
subclass of: SO_0000673
so part of: CC204_RS19260
location: complement(7405..8385)
location: region:7405-8385:-1
so has part: feature:7405-8385:-1:exon

WP_088271773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7405-8385:-1:exon

CC204_RS19265
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19265
so part of: sequence
location: complement(8542..9693)
location: region:8542-9693:-1
so has part: feature:8542-9693:-1:exon
subclass of: SO_0000010

position:8542:-1
position: 8542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9693:-1
position: 9693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8542-9693:-1:exon

CC204_RS19265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19265
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKLSKKTKLIITSVGVIAALAVGGSVYASNQSKQKLDEAQKVITTKTTGLTDLEVKINKLFDDKDNNFLAKNVTKDQVKTLREEFDRLSIGKQTEKVDLKEYNKEAGDTEKALKALEKKVDAQTAINQLFKQEKENAALNGSVVKKDLSIVDDLKKETVESTKKEYYKKDSKTAYDKAINDLIVNAENQVKQIETAKQAVSKIFKENKVISTDHKLYDTAKTETDKIKNAKAKKSLNDQLSKVKTDIEKKAEESKKQSEAKEAASADSMQQPQNGVTSPGTVEAAQEQVQTDQGAATTDYTGDGAATDTGGYVPQGGTDTGYQQPQYQAPPAEQAPQTPPTGGQSTPPGDNGGSNTIHLKPEDIQGSENNNHGGTNEWWGFE
SIO_010081: CC204_RS19265
subclass of: SO_0000673
so part of: CC204_RS19265
location: complement(8542..9693)
location: region:8542-9693:-1
so has part: feature:8542-9693:-1:exon

WP_088271774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8542-9693:-1:exon

CC204_RS19270
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19270
so part of: sequence
location: complement(9903..10082)
location: region:9903-10082:-1
so has part: feature:9903-10082:-1:exon
subclass of: SO_0000010

position:9903:-1
position: 9903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10082:-1
position: 10082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9903-10082:-1:exon

CC204_RS19270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVCSNEEFLTVDQKLGIIVDVYVPLNHRETNLEPNEKIALFKIQASKNKRRKPYKWNWR
SIO_010081: CC204_RS19270
subclass of: SO_0000673
so part of: CC204_RS19270
location: complement(9903..10082)
location: region:9903-10082:-1
so has part: feature:9903-10082:-1:exon

WP_088271775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9903-10082:-1:exon

CC204_RS19275
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19275
so part of: sequence
location: complement(10135..10374)
location: region:10135-10374:-1
so has part: feature:10135-10374:-1:exon
subclass of: SO_0000010

position:10135:-1
position: 10135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10374:-1
position: 10374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10135-10374:-1:exon

CC204_RS19275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002381292.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MPKKKNSSFESSIHVYRAMQRMTQQELADKVGVSRQTIIQLERNRYNPSLLLAHDIADVFEVPIEQIFTFKRINQDVEA
SIO_010081: CC204_RS19275
subclass of: SO_0000673
so part of: CC204_RS19275
location: complement(10135..10374)
location: region:10135-10374:-1
so has part: feature:10135-10374:-1:exon

WP_088271776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10135-10374:-1:exon

CC204_RS19280
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19280
so part of: sequence
location: complement(10355..10921)
location: region:10355-10921:-1
so has part: feature:10355-10921:-1:exon
subclass of: SO_0000010

position:10355:-1
position: 10355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10921:-1
position: 10921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10355-10921:-1:exon

CC204_RS19280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAESVKESIDYAEYKLKKKNLLKLLDRKTKKVLYLEKRTNLLKKLPFLGYFDRSKLVLRTKWYMIPLLAVVPLFALFGKMIYDSGFEQPDIVHMMVPATYLSLFGNVIFTLIVLFLWLLILGIISLAILGVIVEVVKFTSYVFSDRYLVIELKELAERIEKDKRAIKKAQEELNLLNKEWELYAEEKE
SIO_010081: CC204_RS19280
subclass of: SO_0000673
so part of: CC204_RS19280
location: complement(10355..10921)
location: region:10355-10921:-1
so has part: feature:10355-10921:-1:exon

WP_088271777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10355-10921:-1:exon

CC204_RS19285
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19285
so part of: sequence
location: complement(10932..11129)
location: region:10932-11129:-1
so has part: feature:10932-11129:-1:exon
subclass of: SO_0000010

position:10932:-1
position: 10932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11129:-1
position: 11129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10932-11129:-1:exon

CC204_RS19285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKFRIRRFIRQFFEENRDKEMLIIDTTKFSEHQNRVIVNELWKKNLLASSRKKNQVISINTHKS
SIO_010081: CC204_RS19285
subclass of: SO_0000673
so part of: CC204_RS19285
location: complement(10932..11129)
location: region:10932-11129:-1
so has part: feature:10932-11129:-1:exon

WP_088271778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10932-11129:-1:exon

CC204_RS19290
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19290
so part of: sequence
location: complement(11132..11794)
location: region:11132-11794:-1
so has part: feature:11132-11794:-1:exon
subclass of: SO_0000010

position:11132:-1
position: 11132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11794:-1
position: 11794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11132-11794:-1:exon

CC204_RS19290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDEQNDKDNFIILRPRNTQPIVLKPTFGEEVEFEEHGPSFGFVIMFLLGSIIILISLLTLWNQLRSRRRKQQVLTLIECSANRTLVYDEHVFSKEIDIYAYDSVGLIREKLSFPLKYKKCIEIITQENKCKLISSEEYTKKKDRLEAAGDGSLVQEEIFSIYLASGGSFEHDMSEVKTDKEYIKNVVMNFQVDHFTIEDADGISSYKTCNVEAMTMEVV
SIO_010081: CC204_RS19290
subclass of: SO_0000673
so part of: CC204_RS19290
location: complement(11132..11794)
location: region:11132-11794:-1
so has part: feature:11132-11794:-1:exon

WP_088271779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11132-11794:-1:exon

CC204_RS19295
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19295
so part of: sequence
location: complement(12159..12488)
location: region:12159-12488:-1
so has part: feature:12159-12488:-1:exon
subclass of: SO_0000010

position:12159:-1
position: 12159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12488:-1
position: 12488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12159-12488:-1:exon

CC204_RS19295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19295
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVDKLKTLKARDIFWWVFSAVGILLVSYFIFKWLMLSDVFFLSVIMTIAIYLVVIAGGLLCAAIEQTSIPVHAKVVCFIVIGCAALYVIFNNFDGKVESILVFYEQLTH
SIO_010081: CC204_RS19295
subclass of: SO_0000673
so part of: CC204_RS19295
location: complement(12159..12488)
location: region:12159-12488:-1
so has part: feature:12159-12488:-1:exon

WP_088271780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12159-12488:-1:exon

CC204_RS19300
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19300
so part of: sequence
location: complement(12521..12859)
location: region:12521-12859:-1
so has part: feature:12521-12859:-1:exon
subclass of: SO_0000010

position:12521:-1
position: 12521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12859:-1
position: 12859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12521-12859:-1:exon

CC204_RS19300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002385596.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraF
translation: MDNLESISQLMASHRKKYTETMNKNQGKVLTELADFKHGDVVRVISHERNCGIDQTVFTALVVETKDYGLIVIPQDFQTYIYNQEVLKGAAWETEINWLLENDVEIELLQRF
SIO_010081: CC204_RS19300
subclass of: SO_0000673
so part of: CC204_RS19300
location: complement(12521..12859)
location: region:12521-12859:-1
so has part: feature:12521-12859:-1:exon

WP_227011272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12521-12859:-1:exon

CC204_RS19305
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19305
so part of: sequence
location: complement(12859..13296)
location: region:12859-13296:-1
so has part: feature:12859-13296:-1:exon
subclass of: SO_0000010

position:13296:-1
position: 13296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12859-13296:-1:exon

CC204_RS19305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19305
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQRMILTPKILLRVESGRVQLFNHHFYRLCKGKAFRQMVTYENGVQQFNDFGKEVEILKIYDQIKLVFDPEGKIVAVRPAEKESLLAKDDSIWSNFHALKPEPMSNALKCYYEHEALEYYRWIKRERRYCSQKYGKKKNKGATC
SIO_010081: CC204_RS19305
subclass of: SO_0000673
so part of: CC204_RS19305
location: complement(12859..13296)
location: region:12859-13296:-1
so has part: feature:12859-13296:-1:exon

WP_088271781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12859-13296:-1:exon

CC204_RS19310
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19310
so part of: sequence
location: 14033..14989
location: region:14033-14989:1
so has part: feature:14033-14989:1:exon
subclass of: SO_0000010

position:14033:1
position: 14033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14989:1
position: 14989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14033-14989:1:exon

CC204_RS19310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19310
inference: COORDINATES: protein motif:HMM:NF013540.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MLKLELFRGGEYLLFNSKIIRDIRKEFRISQVDLYKDILSRSSYYKLEKGEKDITIGELSLICERLRMRPSELLYRTDFTRLESLPYWENKINLPNLTQDRELFFKQFNIYKKTRFDSIGDYSLYLGLLVLGILSGLITDYMPSKKHLRSLEKMYSNRKIFFAIDYEVLGNLTFFLPQIDINFMTSKMFPITQSEGEVYDLCAQNALKNLISSSIHEKKYDQWKVYNEYFDNLRSIEHFNISTTVNLEVVYLEHLKEFYETRDINAFLEASKIANLFLKLGYKQIHKLLVEEISKIAINENFQIPKEIAVYTQAYSIN
SIO_010081: CC204_RS19310
subclass of: SO_0000673
so part of: CC204_RS19310
location: 14033..14989
location: region:14033-14989:1
so has part: feature:14033-14989:1:exon

WP_162288380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14033-14989:1:exon

CC204_RS19315
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19315
so part of: sequence
location: 15383..15997
location: region:15383-15997:1
so has part: feature:15383-15997:1:exon
subclass of: SO_0000010

position:15383:1
position: 15383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15997:1
position: 15997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15383-15997:1:exon

CC204_RS19315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009442130.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLFGYARVSTKEQNLDRQIQKFNDLGIESRYIFVDKQSGAEFDRPQYQLLLHMLRSGDIVYLDSLDRLGRNYSGVIEEWKYITRKIKADIIVLENSELFDSRKFKTMGDIGLLLEDQFLSMLSYVADQERKKSKLRQTEGIEIAKSAGTVFGRPKLAITEEFKRQYFSWKNGEQTATDTINKLELSPSTFYRRVKEFEQEMAGD
SIO_010081: CC204_RS19315
subclass of: SO_0000673
so part of: CC204_RS19315
location: 15383..15997
location: region:15383-15997:1
so has part: feature:15383-15997:1:exon

WP_088271783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15383-15997:1:exon

CC204_RS19320
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19320
so part of: sequence
location: 15998..18991
location: region:15998-18991:1
so has part: feature:15998-18991:1:exon
subclass of: SO_0000010

position:15998:1
position: 15998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18991:1
position: 18991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15998-18991:1:exon

CC204_RS19320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002387932.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MPVQIMSKEQKQSFGSYAGLPSDEQLVKYFHLDDYDKSIIKTLRNDSTKIGFAVQLGTVRFLGTFLSDLTNVPNEVIEYMAEQLSIESRMFSYYTRIPTIKQHALMIQELYSYRQFHDQAVLDYLEQWIYEGAWYSTEQTTLLADRFLNKCINEKIILPGLTTFERFISRIIDAVTKDIEQAIVNIPSKKEIERINQLTLFFMEGKTSLFTVKLDALREPLKEPSYYEIKRGFQRIKEFASFSVDFWDFSQIPKGKIKLYAEYTAKAKSQSIQRMPESRRLAYLVSFIAEYRSVAMDELLLALEKYFTSIINLAKKKEQQERLRSLKDLDNAAAMLSHIVEDLIDEQTPPEKLLDYVLELREKQEIVAAVSKVKRIVSSDKEPVAIKELLNSFSKFKRLLPDILAHIPFLVSDKDSPVAYIWSFLRDKGDLFLRYQDFEKIQDYLPTKWHNFIDKNQAYANKGIIIAAMELFIKGIKTHTVYVPYSHRYNDPLQNLIPKNVWNEQRKSFVNQLGLAEDGAIAVEDFKISLEMSYRETLKNWNNSNMARIEEKNGQTELIISPLKRQSLSKPRLIEEIHRNLPIVDLPEILLEVNQRLRLTECFSHLNENRSRMKELDISILAVLLAEACNIGLSPVAKKSTESLKNDRLSYVNQNYIRLDTLTAANNKVVDAYQKLALPYIWGTGDMASADGIRFTTPKKSLHSGRNPKYFGRGKGITYYNFLSDSYVGFHGMVISGTIRDSVYLLEGLLNQTSTLTPSQIMTDTAGYSDLVFGLFGILGFQFSPRIAKANETKIWRIDKNANYKILNEHSKNTINTTIIEQEWDDILRIAGSLKSGTVQASYLIRALQHQGNPTPLGRALIEVGKIFKTKHQLRYLSDEEYARNILEQLNKGESRHSLYRKICYGKNGRIYQSYFDGMENQLNALGLVANIIIYWNTLYMEKAIEQLQEANSENQIQEEVLQFSSPLVSEHINFMGKYSFKYNEQLNEGEFRPLGQ
SIO_010081: CC204_RS19320
subclass of: SO_0000673
so part of: CC204_RS19320
location: 15998..18991
location: region:15998-18991:1
so has part: feature:15998-18991:1:exon

WP_227011273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15998-18991:1:exon

CC204_RS19325
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19325
so part of: sequence
location: 19236..19562
location: region:19236-19562:1
so has part: feature:19236-19562:1:exon
subclass of: SO_0000010

position:19236:1
position: 19236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19562:1
position: 19562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19236-19562:1:exon

CC204_RS19325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19325
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKNIEQIIFFGHSLSVADYSYFQSIFDYYNIYDSDVDLIFYYVNYSKNAFPQCLEAITKLIKRYGETLDNKDHGKNLLHKLSLECRLKVKEIQIEYDEETNLIKSIQ
SIO_010081: CC204_RS19325
subclass of: SO_0000673
so part of: CC204_RS19325
location: 19236..19562
location: region:19236-19562:1
so has part: feature:19236-19562:1:exon

WP_088271784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19236-19562:1:exon

CC204_RS19330
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19330
so part of: sequence
location: complement(19637..20107)
location: region:19637-20107:-1
so has part: feature:19637-20107:-1:exon
subclass of: SO_0000010

position:19637:-1
position: 19637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20107:-1
position: 20107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19637-20107:-1:exon

CC204_RS19330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016617093.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENATCKYCGTDLDQHLTCSYCSITFSPEEVCFNQERPHQMVDSIPIIDDFETMIFELMSRPTETLLKEKTITLYYLLRAARKAKDKYFRAKDQERLTFFQKKVYTIENILLEREGTFPLSISDNLLKKKSIQVNKFEQSLAENNRDKMTRLIIRM
SIO_010081: CC204_RS19330
subclass of: SO_0000673
so part of: CC204_RS19330
location: complement(19637..20107)
location: region:19637-20107:-1
so has part: feature:19637-20107:-1:exon

WP_088271785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19637-20107:-1:exon

CC204_RS19340
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19340
so part of: sequence
location: complement(20380..20709)
location: region:20380-20709:-1
so has part: feature:20380-20709:-1:exon
subclass of: SO_0000010

position:20380:-1
position: 20380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20709:-1
position: 20709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20380-20709:-1:exon

CC204_RS19340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEPGKLIVAKKVNGEVQTEYYYSFEPLTDISMLLGTTNLFSMDLSKTLTVFHGLYLPDQAKETITIRWEDRIETFTGSIIFAGRDLLKNVLSLDPIAVEEVRIKLKEIK
SIO_010081: CC204_RS19340
subclass of: SO_0000673
so part of: CC204_RS19340
location: complement(20380..20709)
location: region:20380-20709:-1
so has part: feature:20380-20709:-1:exon

WP_088271787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20380-20709:-1:exon

CC204_RS19345
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19345
so part of: sequence
location: complement(21314..22837)
location: region:21314-22837:-1
so has part: feature:21314-22837:-1:exon
subclass of: SO_0000010

position:21314:-1
position: 21314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22837:-1
position: 22837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21314-22837:-1:exon

CC204_RS19345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19345
inference: COORDINATES: protein motif:HMM:NF025085.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4942 domain-containing protein
translation: MLKDRLKRERYKDPNPVFDLLCNDLKHLNSGSNKVLIPDADLGELALSSMKFRYGVKEEYALLEKDFEKSNNLENQGFEVVGTDFLTFATHIEFDIILLDPPVEKSEDYLLKAFELAQKQVDKSCYISALIRADIIQNPSTALQAALENNETEITFHKNVKPESKEEVALVRVSVTKATDNVHKIYDRLLATKGFEPAQTALERGLSTIVSDRDLEERLKDIRFLISSYNEHISLLKKKYLFDNSLNMFESIMKQKHKFGSFSYRRNDLTLNQEIKSIRSQYWEKILKTDEFRKKLTRHGSSLITDKIDSATKLEITEENVLLLLTALMSNGYEVILDSCVEWFKKMTGNHQNEYSKNIHYYNGFKTNDAFKVNSKIIIPAYQASSYYETVSFGYGHPLEENFKHITHGMQDYMNDLITMFKLIKPDIPTTFTANDYGDLENEFLRFKVFKKGTIHIWFKDLETLDKFNLICGQKFGWVPSSEEMKQDPEALRFAKNEFPNIQNLLN
SIO_010081: CC204_RS19345
subclass of: SO_0000673
so part of: CC204_RS19345
location: complement(21314..22837)
location: region:21314-22837:-1
so has part: feature:21314-22837:-1:exon

WP_157894329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21314-22837:-1:exon

CC204_RS19350
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19350
so part of: sequence
location: complement(22839..23300)
location: region:22839-23300:-1
so has part: feature:22839-23300:-1:exon
subclass of: SO_0000010

position:22839:-1
position: 22839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23300:-1
position: 23300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22839-23300:-1:exon

CC204_RS19350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDYLEILNESELEIEAINRMTILDIQKELISDFLLHRTVFCSELASVGILNPCPFVKKYELEEDTPKMIEDFEKEYKCLVYHTIKTLTDTGTIYNLFYVRENKEDWETQQDDIYASLPFVATINFSSPENVKFGQIQVGHLTGGLYNRFYEER
SIO_010081: CC204_RS19350
subclass of: SO_0000673
so part of: CC204_RS19350
location: complement(22839..23300)
location: region:22839-23300:-1
so has part: feature:22839-23300:-1:exon

WP_088271789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22839-23300:-1:exon

CC204_RS19355
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19355
so part of: sequence
location: complement(23912..24352)
location: region:23912-24352:-1
so has part: feature:23912-24352:-1:exon
subclass of: SO_0000010

position:23912:-1
position: 23912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24352:-1
position: 24352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23912-24352:-1:exon

CC204_RS19355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTNEQIKNEAIKRMRQLDLYEEAINKFIQSGTVCKSEPTNLSILGIGSSVIGTIYELTKEQKKFISDFEKEYDSMVYHVIETNTEFGLVNDLLYVSNNTDQWEMEQEDLSYKTPCVYCVNTTYPDYSEFGSIGIQSSGGGLIRVG
SIO_010081: CC204_RS19355
subclass of: SO_0000673
so part of: CC204_RS19355
location: complement(23912..24352)
location: region:23912-24352:-1
so has part: feature:23912-24352:-1:exon

WP_088271790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23912-24352:-1:exon

CC204_RS19360
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19360
so part of: sequence
location: complement(24367..24867)
location: region:24367-24867:-1
so has part: feature:24367-24867:-1:exon
subclass of: SO_0000010

position:24367:-1
position: 24367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24867:-1
position: 24867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24367-24867:-1:exon

CC204_RS19360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: METNWNPQSFFIGEDIASVHTDKHELQVFAYKYKESETAEYFEMNFGKKEPYDNEDSYDFELIESDEFSPTEANLNDYHEIIEYLCNNFVSNFIKAPLCFPYIKYIDQTNTDSLCLLFVERDDFKLYSETDIPQENYNSELTWELINTLEKEKKVYYTVEIIKDYH
SIO_010081: CC204_RS19360
subclass of: SO_0000673
so part of: CC204_RS19360
location: complement(24367..24867)
location: region:24367-24867:-1
so has part: feature:24367-24867:-1:exon

WP_088271791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24367-24867:-1:exon

CC204_RS19370
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19370
so part of: sequence
location: complement(25322..25771)
location: region:25322-25771:-1
so has part: feature:25322-25771:-1:exon
subclass of: SO_0000010

position:25322:-1
position: 25322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25771:-1
position: 25771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25322-25771:-1:exon

CC204_RS19370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDSLVLLLNGGWEFVINVNSASTLVYLYFGHTDTTVEMLINATDIPFEEILDETDEMIRNEIPDYYLRLLKEAELLNTEQENTLYRIQKEDVVSFLSNNAHEKNVLELFEKNFSCMEDVGYFVNHAESQLELEKRRDMKRHFEYNSES
SIO_010081: CC204_RS19370
subclass of: SO_0000673
so part of: CC204_RS19370
location: complement(25322..25771)
location: region:25322-25771:-1
so has part: feature:25322-25771:-1:exon

WP_088271793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25322-25771:-1:exon

CC204_RS19375
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19375
so part of: sequence
location: complement(25764..26141)
location: region:25764-26141:-1
so has part: feature:25764-26141:-1:exon
subclass of: SO_0000010

position:25764:-1
position: 25764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26141:-1
position: 26141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25764-26141:-1:exon

CC204_RS19375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKSNQQQYLIGLMEVAFSDEYFQLAKNNWNIQLVSKEMTLLRVYDSTHELCFVTRYDEDKLSYFLLFGTYEHQDSQIIHTTDSWKKISESSFKGKSQDEIFEIIRKLFGERKCHALIEGGEIHE
SIO_010081: CC204_RS19375
subclass of: SO_0000673
so part of: CC204_RS19375
location: complement(25764..26141)
location: region:25764-26141:-1
so has part: feature:25764-26141:-1:exon

WP_088271794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25764-26141:-1:exon

CC204_RS19380
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19380
so part of: sequence
location: complement(26145..26600)
location: region:26145-26600:-1
so has part: feature:26145-26600:-1:exon
subclass of: SO_0000010

position:26145:-1
position: 26145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26600:-1
position: 26600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26145-26600:-1:exon

CC204_RS19380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEVTHFRRTGGVFICLIPIMTSFQNYPQSKMAQAISDLTYLYEETKVPKKHYEQHLSKTIVELMESSVELNLLNTYYSMLKDLQVQNPKWFFQAILCLDLKINPSTIKPSEHQAIEMVWNDFIKQKKPKIMDIEVLAQFQKFEKNGLKGE
SIO_010081: CC204_RS19380
subclass of: SO_0000673
so part of: CC204_RS19380
location: complement(26145..26600)
location: region:26145-26600:-1
so has part: feature:26145-26600:-1:exon

WP_227011274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26145-26600:-1:exon

CC204_RS19385
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19385
so part of: sequence
location: complement(27093..27287)
location: region:27093-27287:-1
so has part: feature:27093-27287:-1:exon
subclass of: SO_0000010

position:27093:-1
position: 27093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27287:-1
position: 27287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27093-27287:-1:exon

CC204_RS19385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015979968.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEYKTSEAKRRANKKYDQNNPEGRQYRNKKSAAKSFINIATDEDFLFIQELVKERLERDNTKK
SIO_010081: CC204_RS19385
subclass of: SO_0000673
so part of: CC204_RS19385
location: complement(27093..27287)
location: region:27093-27287:-1
so has part: feature:27093-27287:-1:exon

WP_088271795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27093-27287:-1:exon

CC204_RS19390
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19390
so part of: sequence
location: 27420..27608
location: region:27420-27608:1
so has part: feature:27420-27608:1:exon
subclass of: SO_0000010

position:27420:1
position: 27420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27608:1
position: 27608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27420-27608:1:exon

CC204_RS19390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDHELREELEQWETQFHEHTENLEMDLKEIEDFADQDILDSLTDSQKQLLKKNLVHFIKQVA
SIO_010081: CC204_RS19390
subclass of: SO_0000673
so part of: CC204_RS19390
location: 27420..27608
location: region:27420-27608:1
so has part: feature:27420-27608:1:exon

WP_088271796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27420-27608:1:exon

CC204_RS19395
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19395
so part of: sequence
location: 27658..27885
location: region:27658-27885:1
so has part: feature:27658-27885:1:exon
subclass of: SO_0000010

position:27658:1
position: 27658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27885:1
position: 27885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27658-27885:1:exon

CC204_RS19395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016634632.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKNKLIDLNNHLFEQLERLNDDGLTGEQLDEEIKRAQAMKGIAGQIINNANTAIRAKEVFSEHRIEKDIPEMLE
SIO_010081: CC204_RS19395
subclass of: SO_0000673
so part of: CC204_RS19395
location: 27658..27885
location: region:27658-27885:1
so has part: feature:27658-27885:1:exon

WP_088271797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27658-27885:1:exon

CC204_RS21605
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS21605
so part of: sequence
location: 27957..28439
location: region:27957-28439:1
so has part: feature:27957-28439:1:exon
subclass of: SO_0000010

position:27957:1
position: 27957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28439:1
position: 28439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27957-28439:1:exon

CC204_RS21605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS21605
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPALFNAKFGTNVTAEEIRRYKSNHKIRSNVPTNKKGLSRGLFTEEQKDFIRANAAKRSNKELTDLLNKTFGSTFITSQVKAWKNRNHIDSGLNGYFEKGHVPINKGTKGMFNVGGNSGSFKKGETPLNYKPVGSERIDRGWLLSCEGSGSWDMARKMAA
SIO_010081: CC204_RS21605
subclass of: SO_0000673
so part of: CC204_RS21605
location: 27957..28439
location: region:27957-28439:1
so has part: feature:27957-28439:1:exon

WP_227011275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27957-28439:1:exon

CC204_RS21610
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS21610
so part of: sequence
location: 28447..28686
location: region:28447-28686:1
so has part: feature:28447-28686:1:exon
subclass of: SO_0000010

position:28447:1
position: 28447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28686:1
position: 28686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28447-28686:1:exon

CC204_RS21610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS21610
EC number: 3.1.-.-
inference: COORDINATES: protein motif:HMM:NF024784.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease signature motif containing protein
translation: MIWEKENGPIPAGHVLMFSDGNKENIRLDNLLLITQNQLLQMNRNGWIGEDREITETGLLLADLVSRLAEKKRSRKKEK
SIO_010081: CC204_RS21610
subclass of: SO_0000673
so part of: CC204_RS21610
location: 28447..28686
location: region:28447-28686:1
so has part: feature:28447-28686:1:exon

WP_236923177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28447-28686:1:exon

CC204_RS21735
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS21735
so part of: sequence
location: 28953..29081
location: region:28953-29081:1
so has part: feature:28953-29081:1:exon
subclass of: SO_0000010

position:28953:1
position: 28953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29081:1
position: 29081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28953-29081:1:exon

CC204_RS21735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS21735
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSKERLVTIGEIAKRAKEMGILVFDVFSLVMDLNLRMMCLI
SIO_010081: CC204_RS21735
subclass of: SO_0000673
so part of: CC204_RS21735
location: 28953..29081
location: region:28953-29081:1
so has part: feature:28953-29081:1:exon

WP_257790123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28953-29081:1:exon

CC204_RS21260
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS21260
so part of: sequence
location: 29297..29575
location: region:29297-29575:1
so has part: feature:29297-29575:1:exon
subclass of: SO_0000010

position:29297:1
position: 29297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29575:1
position: 29575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29297-29575:1:exon

CC204_RS21260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS21260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKETENTNEVTKEMLNMFRSIIPGCMVVEVHYLQRDKLTGDFGFWISAGFHYIPSEKVIATLKKKGNWAIGERRCCRMCKEICIKTSSTVD
SIO_010081: CC204_RS21260
subclass of: SO_0000673
so part of: CC204_RS21260
location: 29297..29575
location: region:29297-29575:1
so has part: feature:29297-29575:1:exon

WP_157894331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29297-29575:1:exon

CC204_RS19410
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19410
so part of: sequence
location: 29607..29876
location: region:29607-29876:1
so has part: feature:29607-29876:1:exon
subclass of: SO_0000010

position:29607:1
position: 29607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29876:1
position: 29876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29607-29876:1:exon

CC204_RS19410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19410
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEVVENCLDSTVILLCPENMGQRRVTIKVLNENKVQTFVERMESNFIAEARTNWKSGFKFEKSSSLSMIKSISDPDLFFEIRVIDNFDF
SIO_010081: CC204_RS19410
subclass of: SO_0000673
so part of: CC204_RS19410
location: 29607..29876
location: region:29607-29876:1
so has part: feature:29607-29876:1:exon

WP_088271799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29607-29876:1:exon

CC204_RS19415
type: Gene
subclass of: SO_0000704
RO_0002162: 2005703
locus tag: CC204_RS19415
so part of: sequence
location: 29944..30333
location: region:29944-30333:1
so has part: feature:29944-30333:1:exon
subclass of: SO_0000010

position:29944:1
position: 29944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30333:1
position: 30333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29944-30333:1:exon

CC204_RS19415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2005703
locus tag: CC204_RS19415
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRKELILETGQANSLEELYQLIDKYEKLKENPITDQNYKMDFTAKTVSIDFLDKEFKKGEIVVEHLNNSIGITKITFLGQDPCRERGQMLVETGRLLDNSPESSETEFYWIYKIKDLCVDYKIYIGGY
SIO_010081: CC204_RS19415
subclass of: SO_0000673
so part of: CC204_RS19415
location: 29944..30333
location: region:29944-30333:1
so has part: feature:29944-30333:1:exon

WP_088271800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29944-30333:1:exon