Acinetobacter chinensis strain WCHAc010005 plasmid pNDM1_010005, complete sequence.
type: Entry
definition: Acinetobacter chinensis strain WCHAc010005 plasmid pNDM1_010005, complete sequence.
sequence version: NZ_CP032132.1
sequence date: 2022-11-06
sequence: sequence
division: CON
label: NZ_CP032132.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN07138949
keyword: RefSeq
source: Acinetobacter chinensis
organism: Acinetobacter chinensis
taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Moraxellales; Moraxellaceae; Acinetobacter.
reference: 1
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP032132.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.6\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 200.0x\nSequencing Technology :: Illumina HiSeq; MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/06/2022 02:53:18\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,604\nCDSs (total) :: 3,496\nGenes (coding) :: 3,442\nCDSs (with protein) :: 3,442\nGenes (RNA) :: 108\nrRNAs :: 7, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 7, 7 (5S, 16S, 23S)\ntRNAs :: 83\nncRNAs :: 4\nPseudo Genes (total) :: 54\nCDSs (without protein) :: 54\nPseudo Genes (ambiguous residues) :: 0 of 54\nPseudo Genes (frameshifted) :: 13 of 54\nPseudo Genes (incomplete) :: 40 of 54\nPseudo Genes (internal stop) :: 10 of 54\nPseudo Genes (multiple problems) :: 9 of 54\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 39357
topology: circular
so has quality: SO_0000988
location: 1..39357
location: region:1-39357:1
RO_0002162: 2004650

NZ_CP032132
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN07138949
type: BioSample
SIO_000068: biosample

1
title: The complete genome of Acinetobacter sp. strain WCHAc010005
author: Hu, Y.
author: Long, H.
author: Feng, Y.
author: Zong, Z.
journal: Unpublished

2
title: Direct Submission
author: Hu, Y.
author: Long, H.
author: Feng, Y.
author: Zong, Z.
journal: Submitted (03-SEP-2018) Center of Infectious Diseases, West China Hospital, Sichuan University, Guoxuexiang 37, Chengdu, Sichuan 610041, China

3
title: Direct Submission
author: Hu, Y.
author: Feng, Y.
author: Zong, Z.
journal: Submitted (18-MAY-2017) Center of Infectious Diseases, West China Hospital, Sichuan University, Guoxuexiang 37, Chengdu, Sichuan 610041, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39357:1
position: 39357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-39357:1:source
so part of: sequence
organism: Acinetobacter chinensis
mol type: genomic DNA
strain: WCHAc010005
isolation source: Sewage
type material: type strain of Acinetobacter chinensis
plasmid: pNDM1_010005
country: China: Sichuan, Chengdu
collection date: 2015-10-31

2004650
type: Taxonomy
SIO_000068: taxonomy

CDG60_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00185
old locus tag: CDG60_00185
so part of: sequence
location: complement(join(39180..39357,1..1340))
location: region:1-39357:-1
so has part: feature:1-1340:-1:exon
so has part: feature:39180-39357:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39357:-1
position: 39357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1340:-1:exon

position:1340:-1
position: 1340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39180-39357:-1:exon

position:39180:-1
position: 39180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDG60_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00185
old locus tag: CDG60_00185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015060710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system DNA-binding domain-containing protein
translation: MNDQSQKIFGHAVLAVVITVITTWAIFLPKFFIIPKDHKVQAILYAIPLTFKTPLYVLILLLALVISSALAWFYFQNNKTPFGGERYVRVLRGLQLVSPFKLRRMTKEKDYQIRFCGMPVPKDLKYKHFLLTGGTGQGKSVSISDFLDSCVADSRSKTRLIVVDPNGTYASLFAKKGDVIFNPFDARSVHWSVINEVQNSYDIETYSMTIIPKSSDANHENFNTMARTIVKSAMTKVLEMDELTREQQTQQFLEILLISSDDKLKEFLVGTQAYSLLGNSELVGTLRSIVTTYLSPHTHSKIGDFSFRDYLKHGTGNIFITWREDQLTALQPLVSCATDVICSSLLSDFDNYSDFIFCLDELGSLNRLSYLEAVLTKGRKHRLIALAGIQSLAQLITIYGEKFSITLRGCFSSFGVCAVNSQDTYTPQEYEKAFGAIEVLRKMKSANKDSRPELVKEKENVVKAEEISSLKPLHFYMKFSGHYPPTLVTMKYRTYAKVSDSFLAV
SIO_010081: CDG60_RS00185
subclass of: SO_0000673
so part of: CDG60_RS00185
location: complement(join(39180..39357,1..1340))
location: region:1-39357:-1
so has part: feature:1-1340:-1:exon
so has part: feature:39180-39357:-1:exon

WP_015060710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1340:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39180-39357:-1:exon

CDG60_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00190
old locus tag: CDG60_00190
so part of: sequence
location: complement(1337..2584)
location: region:1337-2584:-1
so has part: feature:1337-2584:-1:exon
subclass of: SO_0000010

position:1337:-1
position: 1337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2584:-1
position: 2584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337-2584:-1:exon

CDG60_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00190
old locus tag: CDG60_00190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005108924.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MKLKKLSLLVLVGLSGATIASNLPYNDIVTSASAKYGYDPLLIHAVIQKESSHNNTAKSGVGAQGLMQLMPATARSLGVTNPNDPTQNVNAGTRYLKQLNQQFGNMPHALYAYNWGMGNLRSYLKGNKKVMPKETQDYVPKIAQFYRNYGGTGSYFGGNVIKGGTTSGGKPATTGIENSNQKKIQAKLETQSACKPVKLPEAEQVDIDSPINLPPVPPVTGGVGKTVFDPTKNADAVLQVQELMKQIQVLKGQYDSVTKGLAGLGLLTNVMQIAGFELPNGFDAQPTNIFNTPKEQNAYNELQRQIATNTGVYASKELAQIQNITASRVNTAYVDAEVAWTQVNCNMQNLKSLAQVSTNTLKQSKDLANALAIENSMLVANQAKLKANMLMMQSSMDSYKVASHQAVQKFLGTVK
SIO_010081: CDG60_RS00190
subclass of: SO_0000673
so part of: CDG60_RS00190
location: complement(1337..2584)
location: region:1337-2584:-1
so has part: feature:1337-2584:-1:exon

WP_017480463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1337-2584:-1:exon

CDG60_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00195
old locus tag: CDG60_00195
so part of: sequence
location: complement(2666..3118)
location: region:2666-3118:-1
so has part: feature:2666-3118:-1:exon
subclass of: SO_0000010

position:2666:-1
position: 2666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3118:-1
position: 3118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2666-3118:-1:exon

CDG60_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00195
old locus tag: CDG60_00195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005404871.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKTTIALCALISLSAEAQLPQTFTQVLQSFAQSNKLTYVPEAPNQGNYVTYKFSSDASCQNEACADLKVYYSIDPACVPQEVGLFGELPVSIPNAKALFVSPTISDNTSQAHDFMRVQANGGCYELSMGEQGSHYKTLVDLANRLAVAK
SIO_010081: CDG60_RS00195
subclass of: SO_0000673
so part of: CDG60_RS00195
location: complement(2666..3118)
location: region:2666-3118:-1
so has part: feature:2666-3118:-1:exon

WP_004999340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2666-3118:-1:exon

CDG60_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00200
old locus tag: CDG60_00200
so part of: sequence
location: complement(3122..3451)
location: region:3122-3451:-1
so has part: feature:3122-3451:-1:exon
subclass of: SO_0000010

position:3122:-1
position: 3122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3451:-1
position: 3451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3122-3451:-1:exon

CDG60_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00200
old locus tag: CDG60_00200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005108926.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKHIFLALLSLASVACSSKGLDGQYNRIDQTAFEKEQGMSSGLIVANKGTQVTLKNSWGDVALSAVEKDKKMVVQYNNQDAFLMEQKGGVITLTDVDNPSQAYKFKKD
SIO_010081: CDG60_RS00200
subclass of: SO_0000673
so part of: CDG60_RS00200
location: complement(3122..3451)
location: region:3122-3451:-1
so has part: feature:3122-3451:-1:exon

WP_004999338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3122-3451:-1:exon

CDG60_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
gene: virB11
locus tag: CDG60_RS00205
old locus tag: CDG60_00205
so part of: sequence
location: complement(3420..4457)
location: region:3420-4457:-1
so has part: feature:3420-4457:-1:exon
subclass of: SO_0000010

position:3420:-1
position: 3420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4457:-1
position: 4457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3420-4457:-1:exon

CDG60_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
gene: virB11
locus tag: CDG60_RS00205
old locus tag: CDG60_00205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015060713.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MSILVLEDLKKAFGDDLDNDQITEISVNKPLEYFIAMKGTRDMIKKENPNLTYALLKRLAEGIATETNQTISEAQPLLSAQIASPQHEGLFFRIQFVRDPAVTGGSIGLSIRKPSILSLPFSAYEEVLNSVEPFAKITAKDQELFDLYEARNFHEFIRKAVGYEKNIIISAGTGSGKTTFFNSIIHDCIPLGERLITIEDAKELRPPHENTLQLYYSRGGQGKAKVDAQSLMEACLRLYPKRILLGEIRGAEAFTYLNLISSGHGGSIATLHANDPLNAIERLTLMVLMAGTTLTSDQVKSFVKQSVDIIVQLGRTETGGYGCSAIYFKAYEDFKNEKTHFSSVA
SIO_010081: CDG60_RS00205
subclass of: SO_0000673
so part of: CDG60_RS00205
location: complement(3420..4457)
location: region:3420-4457:-1
so has part: feature:3420-4457:-1:exon

WP_015060713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3420-4457:-1:exon

CDG60_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00210
old locus tag: CDG60_00210
so part of: sequence
location: complement(4473..5852)
location: region:4473-5852:-1
so has part: feature:4473-5852:-1:exon
subclass of: SO_0000010

position:4473:-1
position: 4473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5852:-1
position: 5852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4473-5852:-1:exon

CDG60_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00210
old locus tag: CDG60_00210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005108928.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MTNENKNLGNDDFKTQDNFSTENHVFHDEKKEHGKDDFERQDAFENKPKTSVKNIDIGKLVKFGGLLALIIGLVIFGVYLKLQKNKESRVESGVESAVAKPVTGMDGSNFNGMDRFGFGNPQPIPTATTPDPVNPTEKSPEQLEMERQLAEQQQQLAMQQEQARQDAMAKEQALLNARYKSGIMVNENGGKGGGVSPNGDASAMAGIPPELAPLFMGMQASQQSNANGNQAGASNVNPRIANSTAGSMGGRFDSSTSNQKAPIAHASYNADRRMLIQQGKIVDAVLETAVKSDLPSNIIARVTNDVYSEQGRNRLLPAGTRLFGQYSSIVNDGQAEIGAVWNRAITPNGVEIMLDSPSTNSLGIAGLGGKVNNHYGRIFGTATLLSIIGAGVSNAGVSSSDQNNASQTYRTEVANSFGNQADRVLQRNLSIPPTITVAHGTRIKVLVAKDLDFSTILNQ
SIO_010081: CDG60_RS00210
subclass of: SO_0000673
so part of: CDG60_RS00210
location: complement(4473..5852)
location: region:4473-5852:-1
so has part: feature:4473-5852:-1:exon

WP_005000433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4473-5852:-1:exon

CDG60_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00215
old locus tag: CDG60_00215
so part of: sequence
location: complement(5854..6591)
location: region:5854-6591:-1
so has part: feature:5854-6591:-1:exon
subclass of: SO_0000010

position:5854:-1
position: 5854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6591:-1
position: 6591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5854-6591:-1:exon

CDG60_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00215
old locus tag: CDG60_00215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005108929.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbG/VirB9 family P-type conjugative transfer protein
translation: MKKTLISILLTATCIASAPTFARQIPVGLKTDNRIKVVPYSESHVVELSTTFGISTTVEFGNETIQTVASGDTIGWQIIPQGNRLFIKPAEKPQAGMNRTNLTVITDKRNYYFNLFNSSQPVYVLRFNYADANRTNRLLAQQNAPRPALGELPMTSQKWGMDATKSKSIKVLGVSDDDQFTFIRIAKNSPRPAVYAVNGEGYEELTNSRQEGDVIVIEKVNDAFTLRLGKEYVCILRKPEVIGGK
SIO_010081: CDG60_RS00215
subclass of: SO_0000673
so part of: CDG60_RS00215
location: complement(5854..6591)
location: region:5854-6591:-1
so has part: feature:5854-6591:-1:exon

WP_005000435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5854-6591:-1:exon

CDG60_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00220
old locus tag: CDG60_00220
so part of: sequence
location: complement(6606..7394)
location: region:6606-7394:-1
so has part: feature:6606-7394:-1:exon
subclass of: SO_0000010

position:6606:-1
position: 6606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7394:-1
position: 7394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6606-7394:-1:exon

CDG60_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00220
old locus tag: CDG60_00220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005000436.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB8/TrbF family protein
translation: MTPQEKAQLDAQIKEIQDNTKKSENRNGKITIWVLGLATVLGIGNVAQGIAIKGLTPLKQPVPMIAVIDSETGIMTSVEKFDSTTDPKLIEKLVTSYFWDTISNRYGYYGKVGKDQLSAQYSKASIFLDSQDRTDFENEVSGMNQNSPYNQLGETGSITPKVIAVNFLGNNKVQANFKTTVIKGAEIRQYSYTVTADYITDNFDDLNVKDRWINPFGVKFKNWNLTQNSSNDALVTQNPVTQPLPKPEASTASEPVAQTSNN
SIO_010081: CDG60_RS00220
subclass of: SO_0000673
so part of: CDG60_RS00220
location: complement(6606..7394)
location: region:6606-7394:-1
so has part: feature:6606-7394:-1:exon

WP_005000436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6606-7394:-1:exon

CDG60_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00225
old locus tag: CDG60_00225
so part of: sequence
location: complement(7394..8479)
location: region:7394-8479:-1
so has part: feature:7394-8479:-1:exon
subclass of: SO_0000010

position:8479:-1
position: 8479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7394-8479:-1:exon

CDG60_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00225
old locus tag: CDG60_00225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005108931.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MKKIIYAFLLLFSFFSFSSAYAVDNFTNPQDLGNGSTPTGTTGGSNGAYNSNQISQNVSEVTKNGMSELDKVVDSLITGVDKNIKDNLQGYYQKVTAPIIPVFAGFIIIWISFQAIKMMLGMAVEIQGVIATFVIMLLIWSIVFSWDAFFPYVAEVFLDDVPNLITEMTGTDSKTTLQSFVSIIFESIALAFNNIDTGITNVVSGFFFVLIYSLIFGLACIVCGLFFLIWIICKVIIGILIAVAPIFLACAMFPATRRYATNWLQAILTPLVVLLLLIVSCDLVLTSVVAGIQNLNENGSTFTGAFIMVIVLIVVIGLFWLVPKIAISLVGSGFEASTSATSSITSSGTNMVKSFGRGGKR
SIO_010081: CDG60_RS00225
subclass of: SO_0000673
so part of: CDG60_RS00225
location: complement(7394..8479)
location: region:7394-8479:-1
so has part: feature:7394-8479:-1:exon

WP_005000437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7394-8479:-1:exon

CDG60_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00230
old locus tag: CDG60_00230
so part of: sequence
location: complement(8487..8906)
location: region:8487-8906:-1
so has part: feature:8487-8906:-1:exon
subclass of: SO_0000010

position:8487:-1
position: 8487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8906:-1
position: 8906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8487-8906:-1:exon

CDG60_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00230
old locus tag: CDG60_00230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005000439.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEINKIKLGLASAVVALGLTGCFTSKPDISGVWVPEHTPKSEFFYSYYVISEADKQGNFPVKKVNYQIQNMNQYNPAKLPKFTGESSGVLTFVKDDTYCYEGSLASDCFVYSDGKLRKSDTQNFFLKTSKNPPEIPVIR
SIO_010081: CDG60_RS00230
subclass of: SO_0000673
so part of: CDG60_RS00230
location: complement(8487..8906)
location: region:8487-8906:-1
so has part: feature:8487-8906:-1:exon

WP_005000439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8487-8906:-1:exon

CDG60_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00235
old locus tag: CDG60_00235
so part of: sequence
location: complement(8893..9264)
location: region:8893-9264:-1
so has part: feature:8893-9264:-1:exon
subclass of: SO_0000010

position:8893:-1
position: 8893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9264:-1
position: 9264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8893-9264:-1:exon

CDG60_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00235
old locus tag: CDG60_00235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005000442.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLLLPIATALVLTACSDEPKAPEVKGDDYVGVWMNPIGQQSQSANDVIINDRIIIDKSTTKDVYTVTILAKGVFTDMKFKPDNGLLCAPNDACFQLVDGKLKLGSESGVLTYEREQQNGNQ
SIO_010081: CDG60_RS00235
subclass of: SO_0000673
so part of: CDG60_RS00235
location: complement(8893..9264)
location: region:8893-9264:-1
so has part: feature:8893-9264:-1:exon

WP_005000442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8893-9264:-1:exon

CDG60_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00245
old locus tag: CDG60_00245
so part of: sequence
location: 10886..11125
location: region:10886-11125:1
so has part: feature:10886-11125:1:exon
subclass of: SO_0000010

position:10886:1
position: 10886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11125:1
position: 11125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10886-11125:1:exon

CDG60_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00245
old locus tag: CDG60_00245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005000443.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKSTKGKTRSTMIGNQNSVKEVVKEDRFQTRMNHEDKLKLIKFCKDNNLSQTDFLINSMVDKGILPESRRSVKTTDNT
SIO_010081: CDG60_RS00245
subclass of: SO_0000673
so part of: CDG60_RS00245
location: 10886..11125
location: region:10886-11125:1
so has part: feature:10886-11125:1:exon

WP_005000443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10886-11125:1:exon

CDG60_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00250
old locus tag: CDG60_00250
so part of: sequence
location: 11142..11831
location: region:11142-11831:1
so has part: feature:11142-11831:1:exon
subclass of: SO_0000010

position:11142:1
position: 11142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11831:1
position: 11831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11142-11831:1:exon

CDG60_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00250
old locus tag: CDG60_00250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005000446.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MSNNTEKLSKVIALVNQKGGVSKTTTSINLAMGLSLRGYDVLLVDGDPQASSLDWATVREEADIDLGFTVIGVPKTNLAKEIAKIKSKYDFVITDSAGRQSELTRLAIVACDVAIVPNTTSPLDAWATKETLKSINEIKGYRDFSAYFLLSGVNPQTKVFNEVKEWLAESYPLPILDTKIALRTAFSRSLGEGLSIYEYKDDHGKQDKKAIAEVDALIDEILQREGMTE
SIO_010081: CDG60_RS00250
subclass of: SO_0000673
so part of: CDG60_RS00250
location: 11142..11831
location: region:11142-11831:1
so has part: feature:11142-11831:1:exon

WP_005000446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11142-11831:1:exon

CDG60_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00255
old locus tag: CDG60_00255
so part of: sequence
location: 11828..12232
location: region:11828-12232:1
so has part: feature:11828-12232:1:exon
subclass of: SO_0000010

position:11828:1
position: 11828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12232:1
position: 12232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11828-12232:1:exon

CDG60_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00255
old locus tag: CDG60_00255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005000449.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAPKGNATVTSSNAHIANEKAHIVNSLNFDKIQKIKINPDLYKKIEKVADKRKVVLADIARSALDFYLNNPSAPYSEELSKGNSKQLIYTINHLYDVKINSFKAVHGINRSDQIRQALSAWLINENLLKLDEN
SIO_010081: CDG60_RS00255
subclass of: SO_0000673
so part of: CDG60_RS00255
location: 11828..12232
location: region:11828-12232:1
so has part: feature:11828-12232:1:exon

WP_005000449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11828-12232:1:exon

CDG60_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00270
old locus tag: CDG60_00270
so part of: sequence
location: complement(12873..13901)
location: region:12873-13901:-1
so has part: feature:12873-13901:-1:exon
subclass of: SO_0000010

position:12873:-1
position: 12873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13901:-1
position: 13901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12873-13901:-1:exon

CDG60_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00270
old locus tag: CDG60_00270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005000195.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANLSNEFAIPLKVVTARCQHLKASFKGIFNKIESKAIKYKNDDKKISSLVTWDDWIYAGLDCYAPDWQKGLNVGDAIPDHLINNLPCPTGELVTLGSWMLTKNIYRFENEVATELTKSKFEGNLPNFLINVPELCIYVQTDNFDLHFQQSKIYGVIFTLTELCYQKVLVSTIFLDTGLTRTIVLLVNEEKAIEDCLSDFIDEFHDDRSILDENEIDQYQSLQKQLINILLWFSLSKPDYVPLLPDNHKERVGVQTVKRVPRLFEAQKYKPFIAGKEMSKQIKAVNDQLTEYSKQSSKVHRRPHLRRAHYHLYWYGAKGSYERYDFKWIPITLVGGTIKNMD
SIO_010081: CDG60_RS00270
subclass of: SO_0000673
so part of: CDG60_RS00270
location: complement(12873..13901)
location: region:12873-13901:-1
so has part: feature:12873-13901:-1:exon

WP_005000195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12873-13901:-1:exon

CDG60_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00275
old locus tag: CDG60_00275
so part of: sequence
location: 14289..14594
location: region:14289-14594:1
so has part: feature:14289-14594:1:exon
subclass of: SO_0000010

position:14289:1
position: 14289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14594:1
position: 14594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14289-14594:1:exon

CDG60_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00275
old locus tag: CDG60_00275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005000193.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNIFTKLDTKKIVIELLNAFEKANFDYYSRAYLESPKGTFCVSFGNCQMQDANIITIYIDKAPHEFYFTHEHSNIAEAHHEAINLFKQILDFYFTYLKQT
SIO_010081: CDG60_RS00275
subclass of: SO_0000673
so part of: CDG60_RS00275
location: 14289..14594
location: region:14289-14594:1
so has part: feature:14289-14594:1:exon

WP_005000193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14289-14594:1:exon

CDG60_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00280
old locus tag: CDG60_00280
so part of: sequence
location: 14820..15215
location: region:14820-15215:1
so has part: feature:14820-15215:1:exon
subclass of: SO_0000010

position:14820:1
position: 14820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15215:1
position: 15215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14820-15215:1:exon

CDG60_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00280
old locus tag: CDG60_00280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005000189.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSKEQLSLELPIVETAQSYKDMKGLYSVDISHIYRFYILLNWYGVLEKSKVIKAGSDAIFECDNEMIADEILNCIPSCKKRKVYRVPNFNPIYFSGIDKPSVNRWKFSVERKLGYEKSIYFRSVASRWDY
SIO_010081: CDG60_RS00280
subclass of: SO_0000673
so part of: CDG60_RS00280
location: 14820..15215
location: region:14820-15215:1
so has part: feature:14820-15215:1:exon

WP_005000189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14820-15215:1:exon

CDG60_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00285
old locus tag: CDG60_00285
so part of: sequence
location: 15526..16119
location: region:15526-16119:1
so has part: feature:15526-16119:1:exon
subclass of: SO_0000010

position:15526:1
position: 15526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16119:1
position: 16119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15526-16119:1:exon

CDG60_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00285
old locus tag: CDG60_00285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017480466.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNFTQNEKGQMFYEGSLVLTAKDGSVFFVSTEMLVCKAYRAKAKKPFINTHYRTIERLKQAVGESIQSCNARYEQKLQNKEKTAERLKKFREELQVGDILSTCWGYEQTNVEFYQVVSKKGAFCEVREIAKRSHDTAFMQSEVSPKQNEFIGEPIKKKILDGYIMITSYIRATPHEYETLATGTKVYKRSYVSSYA
SIO_010081: CDG60_RS00285
subclass of: SO_0000673
so part of: CDG60_RS00285
location: 15526..16119
location: region:15526-16119:1
so has part: feature:15526-16119:1:exon

WP_017480466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15526-16119:1:exon

CDG60_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00290
old locus tag: CDG60_00290
so part of: sequence
location: 16350..16823
location: region:16350-16823:1
so has part: feature:16350-16823:1:exon
subclass of: SO_0000010

position:16350:1
position: 16350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16823:1
position: 16823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16350-16823:1:exon

CDG60_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00290
old locus tag: CDG60_00290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015060716.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDLVLLTDEEIADMSYDSFNKTDLVAMQSMQESEFPRYTVAMAHTIYVWENILYQEASRLCESYDGGVWETKNGFWTLQSDSIFYMENGWDEAFNLNALEFSIVVNLFALSKIAMMTYSSKPAINRRAVFFSDYIKDVIHKNRNVLDTTAIYKLIY
SIO_010081: CDG60_RS00290
subclass of: SO_0000673
so part of: CDG60_RS00290
location: 16350..16823
location: region:16350-16823:1
so has part: feature:16350-16823:1:exon

WP_015060716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16350-16823:1:exon

CDG60_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00295
old locus tag: CDG60_00295
so part of: sequence
location: 17057..17548
location: region:17057-17548:1
so has part: feature:17057-17548:1:exon
subclass of: SO_0000010

position:17057:1
position: 17057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17548:1
position: 17548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17057-17548:1:exon

CDG60_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00295
old locus tag: CDG60_00295
inference: COORDINATES: protein motif:HMM:NF023505.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3560 domain-containing protein
translation: MNDQNNNDAIKAERLNRYEERQQNRLDRYEALADKATVKSTVLATRSNQMVECIPFGQPVLVGHHSEKRDRNFRSKIHSIMGKSVQEMKKAEYYQNKADSVGKGGISSDDPNAIEKLKSKLEKLQQAQELMKKANKLIKKFPEHNARLEGLRDGSVNLNNSYK
SIO_010081: CDG60_RS00295
subclass of: SO_0000673
so part of: CDG60_RS00295
location: 17057..17548
location: region:17057-17548:1
so has part: feature:17057-17548:1:exon

WP_227542860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17057-17548:1:exon

CDG60_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00300
old locus tag: CDG60_00300
so part of: sequence
location: 17598..18730
location: region:17598-18730:1
so has part: feature:17598-18730:1:exon
subclass of: SO_0000010

position:17598:1
position: 17598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18730:1
position: 18730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17598-18730:1:exon

CDG60_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00300
old locus tag: CDG60_00300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032072965.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3-like element ISAba14 family transposase
translation: MARRPRRNHSNDFKAKVALAAIKAEKTLAELSAEFDVHQNQIIDWKNQLISASSQAFDQSKAPTEPPIDLKKLHAKIGEQALEIGFFRRCVEETGPLQPQKLIDDSLQISVSKQAKLLKVSRGCYYYRPKPVSASDLKLMRCIDELHMQYPFAGSRMMRDLLNRQGHHIGRRHTRTLMKKMGIQALYCKPNLSQANQAHRKYPYLLKGLAIQRSNQVWSTDITYIPMAKGFVYLCAVIDWHSRKVLAHRVSISMEVDFCISALNEAIEKYGRPEIFNTDQGSQFTSDAFIDVLKSNGIQISMDGKGRWVDNVMVERLWRSVKYEEVYLKAYSSVTDAKKQLSAYFEFYNLKRPHSSLDKMTPNEFYYDQLPQQNKVA
SIO_010081: CDG60_RS00300
subclass of: SO_0000673
so part of: CDG60_RS00300
location: join(17598..17850,17850..18730)
location: region:17598-18730:1
so has part: feature:17598-17850:1:exon
so has part: feature:17850-18730:1:exon

WP_223155595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17598-17850:1:exon

position:17850:1
position: 17850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17850-18730:1:exon

CDG60_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00305
old locus tag: CDG60_00305
so part of: sequence
location: 18836..19615
location: region:18836-19615:1
so has part: feature:18836-19615:1:exon
subclass of: SO_0000010

position:18836:1
position: 18836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19615:1
position: 19615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18836-19615:1:exon

CDG60_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00305
old locus tag: CDG60_00305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000422636.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: APH(3')-VI family aminoglycoside O-phosphotransferase
translation: MELPNIIQQFIGNSVLEPNKIGQSPSDVYSFNRNNETFFLKRSSTLYTETTYSVSREAKMLSWLSEKLKVPELIMTFQDEQFELMITKAINAKPISALFLTDQELLAIYKEALNLLNSVAIIDCPFISNIDHRLKESKFFIDNQLLDDIDQDDFDAELWGDHRTYLSLWNELTETRVEERLVFSHGDITDSNIFIDKFNEIYFLDLGRAGLADEFVDISFVERCLREDASEETAKIFLKHLKNDRPDKRNYFLKLDELN
SIO_010081: CDG60_RS00305
subclass of: SO_0000673
so part of: CDG60_RS00305
location: 18836..19615
location: region:18836-19615:1
so has part: feature:18836-19615:1:exon

WP_014386410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18836-19615:1:exon

CDG60_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00310
old locus tag: CDG60_00310
so part of: sequence
location: 19824..20792
location: region:19824-20792:1
so has part: feature:19824-20792:1:exon
subclass of: SO_0000010

position:19824:1
position: 19824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20792:1
position: 20792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19824-20792:1:exon

CDG60_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00310
old locus tag: CDG60_00310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611607.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MLESRKEGFSARKFAELIKRHPSTIYRELKRNSINDVYQARYASDNTFARRRRGHRKLKIDSILWKFIVEAIRCLWSPQQIAKRLKTFPDLDQTMNVSHTTIYSTIRALPKGELKKDLLSCLRHENKKRKANGEPKKDSILQDIKTIHERPAEVQERKIPGHWEADLIKGKDNKSSIATLIERNTRLCILATLPDAKAESVRKALTEALKYLPAELRKTLTYDRGREMSEHKILEEDLGIDVYFCDPHSPWQKGTCENMNGLIRQYLPKGIDLNQADQHYLNQVAMSLNTRPRKALDWLTPLEKFAQLVDYHMAFETVAPHV
SIO_010081: CDG60_RS00310
subclass of: SO_0000673
so part of: CDG60_RS00310
location: 19824..20792
location: region:19824-20792:1
so has part: feature:19824-20792:1:exon

WP_005804963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19824-20792:1:exon

CDG60_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00315
old locus tag: CDG60_00315
so part of: sequence
location: 20893..21705
location: region:20893-21705:1
so has part: feature:20893-21705:1:exon
subclass of: SO_0000010

position:20893:1
position: 20893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21705:1
position: 21705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20893-21705:1:exon

CDG60_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00315
old locus tag: CDG60_00315
EC number: 3.5.2.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032492661.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: subclass B1 metallo-beta-lactamase NDM-1
translation: MELPNIMHPVAKLSTALAAALMLSGCMPGEIRPTIGQQMETGDQRFGDLVFRQLAPNVWQHTSYLDMPGFGAVASNGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFGPLKVFYPGPGHTSDNITVGIDGTDIAFGGCLIKDSKAKSLGNLGDADTEHYAASARAFGAAFPKASMIVMSHSAPDSRAAITHTARMADKLR
SIO_010081: CDG60_RS00315
subclass of: SO_0000673
so part of: CDG60_RS00315
location: 20893..21705
location: region:20893-21705:1
so has part: feature:20893-21705:1:exon

WP_004201164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20893-21705:1:exon

CDG60_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
gene: ble
locus tag: CDG60_RS00320
old locus tag: CDG60_00320
so part of: sequence
location: 21709..22074
location: region:21709-22074:1
so has part: feature:21709-22074:1:exon
subclass of: SO_0000010

position:21709:1
position: 21709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22074:1
position: 22074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21709-22074:1:exon

CDG60_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
gene: ble
locus tag: CDG60_RS00320
old locus tag: CDG60_00320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004201167.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bleomycin binding protein Ble-MBL
translation: MADHVTPNLPSRDFDVTEAFYAKLGFATSWKDRGWMILQRGGLQLEFFPYPDLDPATSSFGCCLRLDDLDAMVALVNAAGAEEKSTGWPRFKAPQLEASGLRIGYLIDPDCTLVRLIQNPD
SIO_010081: CDG60_RS00320
subclass of: SO_0000673
so part of: CDG60_RS00320
location: 21709..22074
location: region:21709-22074:1
so has part: feature:21709-22074:1:exon

WP_004201167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21709-22074:1:exon

CDG60_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00325
old locus tag: CDG60_00325
so part of: sequence
location: 22079..22717
location: region:22079-22717:1
so has part: feature:22079-22717:1:exon
subclass of: SO_0000010

position:22079:1
position: 22079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22717:1
position: 22717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22079-22717:1:exon

CDG60_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00325
old locus tag: CDG60_00325
EC number: 5.3.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004201168.1
GO function: GO:0004640 - phosphoribosylanthranilate isomerase activity [Evidence IEA]
GO process: GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylanthranilate isomerase
translation: MPAKIKICGISTPEALDATIAARADYAGLVFYPASPRAVTSNVAGALTSRAAGQIAMVGLFVDADDAVIADALVAAKLNALQLHGSESPERVAQLRARFGKPVWKALPVASASDVARAAAYAGAADLILFDAKTPKGALPGGMGLAFDWSLLAGYRGALPWGLAGGLNPTNVAEAIARTGAPLVDTSSGVESAPGVKDTDKITNFAFAVRLA
SIO_010081: CDG60_RS00325
subclass of: SO_0000673
so part of: CDG60_RS00325
location: 22079..22717
location: region:22079-22717:1
so has part: feature:22079-22717:1:exon

WP_004201168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22079-22717:1:exon

CDG60_RS18355
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS18355
pseudo: true
so part of: sequence
location: complement(22728..>23285)
location: region:22728-23285:-1
so has part: feature:22728-23285:-1:exon
subclass of: SO_0000010

position:22728:-1
position: 22728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23285:-1
position: 23285
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22728-23285:-1:exon

CDG60_RS18355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS18355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006399920.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: twin-arginine translocation (TAT) pathway signal sequence domain protein
SIO_010081: CDG60_RS18355
subclass of: SO_0000673
so part of: CDG60_RS18355
location: complement(22728..>23285)
location: region:22728-23285:-1
so has part: feature:22728-23285:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22728-23285:-1:exon

CDG60_RS18360
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS18360
pseudo: true
so part of: sequence
location: complement(<23385..23759)
location: region:23385-23759:-1
so has part: feature:23385-23759:-1:exon
subclass of: SO_0000010

position:23385:-1
position: 23385
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:23759:-1
position: 23759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23385-23759:-1:exon

CDG60_RS18360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS18360
inference: COORDINATES: protein motif:HMM:NF022853.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: protein-disulfide reductase DsbD family protein
SIO_010081: CDG60_RS18360
subclass of: SO_0000673
so part of: CDG60_RS18360
location: complement(<23385..23759)
location: region:23385-23759:-1
so has part: feature:23385-23759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23385-23759:-1:exon

CDG60_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00335
old locus tag: CDG60_00335
so part of: sequence
location: complement(23764..24093)
location: region:23764-24093:-1
so has part: feature:23764-24093:-1:exon
subclass of: SO_0000010

position:23764:-1
position: 23764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24093:-1
position: 24093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23764-24093:-1:exon

CDG60_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00335
old locus tag: CDG60_00335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004201171.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: divalent-cation tolerance protein CutA
translation: MPVSALICFCTCPDADSAERIATALVAERLAACVNLLPGLRSVYRWQRKVEAAAEVLLLVKTSAEAYPALQERLRQLHPYELPELLAVEAASGLPEYLQWLAAESRPVN
SIO_010081: CDG60_RS00335
subclass of: SO_0000673
so part of: CDG60_RS00335
location: complement(23764..24093)
location: region:23764-24093:-1
so has part: feature:23764-24093:-1:exon

WP_004201171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23764-24093:-1:exon

CDG60_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
gene: groES
locus tag: CDG60_RS00340
old locus tag: CDG60_00340
so part of: sequence
location: 24287..24577
location: region:24287-24577:1
so has part: feature:24287-24577:1:exon
subclass of: SO_0000010

position:24287:1
position: 24287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24577:1
position: 24577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24287-24577:1:exon

CDG60_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
gene: groES
locus tag: CDG60_RS00340
old locus tag: CDG60_00340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013534102.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: co-chaperone GroES
translation: MSNIKPLHDRVVIKRMEEEKLSAGGIVIPDSATEKPIKGEVVAVGTGKVLDNGQVRAPQVKVGDKVLFGKYSGTEVKLDGVELLVVKEDDLFAILG
SIO_010081: CDG60_RS00340
subclass of: SO_0000673
so part of: CDG60_RS00340
location: 24287..24577
location: region:24287-24577:1
so has part: feature:24287-24577:1:exon

WP_004201172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24287-24577:1:exon

CDG60_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
gene: groL
locus tag: CDG60_RS00345
old locus tag: CDG60_00345
so part of: sequence
location: 24633..26273
location: region:24633-26273:1
so has part: feature:24633-26273:1:exon
subclass of: SO_0000010

position:24633:1
position: 24633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26273:1
position: 26273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24633-26273:1:exon

CDG60_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
gene: groL
locus tag: CDG60_RS00345
old locus tag: CDG60_00345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005411226.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chaperonin GroEL
translation: MAAKDIRFGEDARSKMVRGVNVLANAVKATLGPKGRNVVLQKSYGAPTITKDGVSVAKEIELADAFENMGAQMVKEVASKTSDNAGDGTTTATVLAQAFIREGMKAVAAGMNPMDLKRGIDQAVKAAVGELKSLSKPSSTSKEIAQVGAISANSDANIGDLIAQAMDKVGKEGVITVEEGSGLDNELDVVEGMQFDRGYLSPYFVNNQQSMSADLDDPFILLYDKKISNVRDLLPVLEGVAKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVCAVKAPGFGDRRKAMLEDMAILTGGVVISEEVGLSLEKATIKDLGRAKKIQVSKENTTIIDGAGEGAGIEARIKQIKAQIEETSSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRAKAAIAGIKGVNEDQNHGIQIALRAMEAPLREIVTNAGDEPSVILNRVVEGSGAFGYNAANGEFGDMIEFGILDPTKVTRTALQNAASIAGLMITTEAMVAEAPKKDEPAMPAGGGMGGMGGMDF
SIO_010081: CDG60_RS00345
subclass of: SO_0000673
so part of: CDG60_RS00345
location: 24633..26273
location: region:24633-26273:1
so has part: feature:24633-26273:1:exon

WP_004201176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24633-26273:1:exon

CDG60_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00350
old locus tag: CDG60_00350
so part of: sequence
location: 26498..27991
location: region:26498-27991:1
so has part: feature:26498-27991:1:exon
subclass of: SO_0000010

position:26498:1
position: 26498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27991:1
position: 27991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26498-27991:1:exon

CDG60_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00350
old locus tag: CDG60_00350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001137772.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS91 family transposase
translation: MCAPLPAAHAAARYARHLPERTLLYALVQAHYPDFIARLEAEDRPLPEYVREEFETYLRCGVLEHGFLRVVCEHCRAERLVAYSCKKRGLCPSCGARRMAESARHLVDEVFGPRPVRQWVLSFPYPLRFLFASKPEAIGPVLGIVHRVIAGWLADQAGVPRDTAQCGVVTLIQRFGSALNLNIHFHMLWLDGVYEDTTERPQRKPRLHRTRAPTSAQLTELANTIAHRVCRHLSRRGWLEGEDESVFLSDSAGSDDGMDGLRMSSMTYRIATGRDAGRKVVTLQTLPGDAGPLEGDAGKVGGFSLHAGVAAEAHESHKLEKLCRYITRPAISEQRLSISPQGRVRYQLKTPWRNGTTHVEWDAVDFIAKLAALVPPPRAHLTRFHGVFAPNANLRAQLTPSGRGRRPAGDAAPVDVSAHDEPRSPEQKRRAMSWAQRLKRVFSIDITTCAHCGGAVRIVASIEDPKAIRAILAHFEKHGALEQAHYRPAARAPPPAA
SIO_010081: CDG60_RS00350
subclass of: SO_0000673
so part of: CDG60_RS00350
location: 26498..27991
location: region:26498-27991:1
so has part: feature:26498-27991:1:exon

WP_043907034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26498-27991:1:exon

CDG60_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00360
old locus tag: CDG60_00360
pseudo: true
so part of: sequence
location: complement(<28247..28486)
location: region:28247-28486:-1
so has part: feature:28247-28486:-1:exon
subclass of: SO_0000010

position:28247:-1
position: 28247
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:28486:-1
position: 28486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28247-28486:-1:exon

CDG60_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00360
old locus tag: CDG60_00360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004761801.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: CDG60_RS00360
subclass of: SO_0000673
so part of: CDG60_RS00360
location: complement(<28247..28486)
location: region:28247-28486:-1
so has part: feature:28247-28486:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28247-28486:-1:exon

CDG60_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00365
old locus tag: CDG60_00365
so part of: sequence
location: 28836..29804
location: region:28836-29804:1
so has part: feature:28836-29804:1:exon
subclass of: SO_0000010

position:28836:1
position: 28836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29804:1
position: 29804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28836-29804:1:exon

CDG60_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00365
old locus tag: CDG60_00365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611607.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MLESRKEGFSARKFAELIKRHPSTIYRELKRNSINDVYQARYASDNTFARRRRGHRKLKIDSILWKFIVEAIRCLWSPQQIAKRLKTFPDLDQTMNVSHTTIYSTIRALPKGELKKDLLSCLRHENKKRKANGEPKKDSILQDIKTIHERPAEVQERKIPGHWEADLIKGKDNKSSIATLIERNTRLCILATLPDAKAESVRKALTEALKYLPAELRKTLTYDRGREMAEHKILEEDLGIDVYFCDPHSPWQKGTCENMNGLIRQYLPKGIDLNQADQHYLNQVAMSLNTRPRKALDWLTPLEKFAQLVDYHMAFETVAPHV
SIO_010081: CDG60_RS00365
subclass of: SO_0000673
so part of: CDG60_RS00365
location: 28836..29804
location: region:28836-29804:1
so has part: feature:28836-29804:1:exon

WP_228761495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28836-29804:1:exon

CDG60_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00370
old locus tag: CDG60_00370
so part of: sequence
location: complement(30419..31066)
location: region:30419-31066:-1
so has part: feature:30419-31066:-1:exon
subclass of: SO_0000010

position:30419:-1
position: 30419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31066:-1
position: 31066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30419-31066:-1:exon

CDG60_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00370
old locus tag: CDG60_00370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004993315.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MEKENLDIEDQIKNTPFQRVGYIRVSTKDQNPERQLHDLPFELDKTFIDHFSGKTAKRPALQEMFDYVRSGDIVYAHDVFRLARSLIDLVTIVQKLNKKGVSVHIVKNNLNFTPNSDDKFDKFQLHVLGAVAELERGIISENQAEGIKLAKKKKGKYKGRSPAITEEKLKELIHTLKNKDDSYPFTQIAKDYGVSYMTLIRYRKKYAKQINAQSD
SIO_010081: CDG60_RS00370
subclass of: SO_0000673
so part of: CDG60_RS00370
location: complement(30419..31066)
location: region:30419-31066:-1
so has part: feature:30419-31066:-1:exon

WP_004993315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30419-31066:-1:exon

CDG60_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00375
old locus tag: CDG60_00375
so part of: sequence
location: 31218..31442
location: region:31218-31442:1
so has part: feature:31218-31442:1:exon
subclass of: SO_0000010

position:31218:1
position: 31218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31442:1
position: 31442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31218-31442:1:exon

CDG60_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00375
old locus tag: CDG60_00375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004993314.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MINFNDLSESELLRIAQTGISNRIGLRTSGHLPEDDRQALSMELQGLYEQDREQLIQSIKKHSEAYKSEQSNQE
SIO_010081: CDG60_RS00375
subclass of: SO_0000673
so part of: CDG60_RS00375
location: 31218..31442
location: region:31218-31442:1
so has part: feature:31218-31442:1:exon

WP_015056389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31218-31442:1:exon

CDG60_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00380
old locus tag: CDG60_00380
so part of: sequence
location: 31626..33338
location: region:31626-33338:1
so has part: feature:31626-33338:1:exon
subclass of: SO_0000010

position:31626:1
position: 31626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33338:1
position: 33338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31626-33338:1:exon

CDG60_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00380
old locus tag: CDG60_00380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015060705.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zeta toxin family protein
translation: MDNQYKLSDEEHSLVFEKIKADFLNNSLSIVSPKVVITGGQPASGKGKLARDSIDQFKDKGGSVIIDPDQLRAYHPKYNELQKLDDKTSSGFTHHDAKKWSLELIEEAISHKKNIVLDQTSADFQTLKNTVQNFRDKGYKDVELKIMAVPEITSRQGIYHRYEMEKALYETGRFVNIDIHSEIYHKLENTIEQLKDEPIVDKLTVYDRHYNAIEQKDFKAERERPFSDQERQQHEYKWFKVIEAMQTRFAPYTEVEIVKGLQESDRLKLNNQKLVSEVTQVDESTGEKMDVKIVSNLTSNLLVAKDDFEKQDGYLSKNIKVDGEDNLVMFRQNRDHLELINVTKNEMMLDKPIGNHDSKQPESTALQVYMEVKEKLNNLENKILMKVDEQLSNKPKAPEVKGDSKAEVSQFQSKAPELDKHQIIKEVRIQLKQEGKLGADFAKSANGLSVAHGDYIKLNEAYSQKDGLFKTTNLPKDAEIKITGHTTKKGETYATGVHNNSNVELKIRSVEARYGDQYVKRYETNPEVKQAVDQRVIAQQTTFKSLSASRVQELSQSSPKQDKPTSGMKF
SIO_010081: CDG60_RS00380
subclass of: SO_0000673
so part of: CDG60_RS00380
location: 31626..33338
location: region:31626-33338:1
so has part: feature:31626-33338:1:exon

WP_015060705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31626-33338:1:exon

CDG60_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00385
old locus tag: CDG60_00385
so part of: sequence
location: complement(33335..33817)
location: region:33335-33817:-1
so has part: feature:33335-33817:-1:exon
subclass of: SO_0000010

position:33335:-1
position: 33335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33817:-1
position: 33817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33335-33817:-1:exon

CDG60_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00385
old locus tag: CDG60_00385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004993309.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thermonuclease family protein
translation: MNKLFCITLFLFSAYCHADYYGKVTYVLDGDTVSITKPNNTKWRVRLSFIDAPEVANNAKNSPTQPYGQQSKQYLMSMVLNKTVLVKEHGTDNNGRFLGELYLNKLNVNKAMVASGYAWAYRYNLPDRTYIDLENNARSKKIGLWKSPNPINPYDWRKKY
SIO_010081: CDG60_RS00385
subclass of: SO_0000673
so part of: CDG60_RS00385
location: complement(33335..33817)
location: region:33335-33817:-1
so has part: feature:33335-33817:-1:exon

WP_015060706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33335-33817:-1:exon

CDG60_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00390
old locus tag: CDG60_00390
so part of: sequence
location: complement(34017..34478)
location: region:34017-34478:-1
so has part: feature:34017-34478:-1:exon
subclass of: SO_0000010

position:34017:-1
position: 34017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34478:-1
position: 34478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34017-34478:-1:exon

CDG60_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00390
old locus tag: CDG60_00390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015060707.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIIIPVLALIAFNTYAETAQNGTETPVAIEASHTSLTTKKGEIEVKKDGKTVSVSKVPESPLINTVTTTQTTSKAPEAKKVVKEIQSESVKEPVVIYQASEIMPELSQADLDYIKAVNSNDKINSIESKIVNNEAISKEELKILRQKNPNY
SIO_010081: CDG60_RS00390
subclass of: SO_0000673
so part of: CDG60_RS00390
location: complement(34017..34478)
location: region:34017-34478:-1
so has part: feature:34017-34478:-1:exon

WP_015060707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34017-34478:-1:exon

CDG60_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00395
old locus tag: CDG60_00395
so part of: sequence
location: complement(34541..35182)
location: region:34541-35182:-1
so has part: feature:34541-35182:-1:exon
subclass of: SO_0000010

position:34541:-1
position: 34541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35182:-1
position: 35182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34541-35182:-1:exon

CDG60_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00395
old locus tag: CDG60_00395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004999358.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKMNKIKMSAVAFALAFTANTANAWDVVFDPTAVANMVKQLVQMQQQYEIMKKQYESTTGNTGIGTSGVKNVQDVVSGSWQDVVANQKTGSFGNAQKAYDKVLTTIGSDGMNQLLGNDQYKRNYNTVKTGFAFSDASYNALNEHVANLTTLKNKINSTRNIKEAQDLANAIAIEQGYINSIGAKLSAVQTNLASNNASSGVTSTQSFKSWFGN
SIO_010081: CDG60_RS00395
subclass of: SO_0000673
so part of: CDG60_RS00395
location: complement(34541..35182)
location: region:34541-35182:-1
so has part: feature:34541-35182:-1:exon

WP_004999358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34541-35182:-1:exon

CDG60_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00400
old locus tag: CDG60_00400
so part of: sequence
location: complement(35179..37890)
location: region:35179-37890:-1
so has part: feature:35179-37890:-1:exon
subclass of: SO_0000010

position:35179:-1
position: 35179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37890:-1
position: 37890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35179-37890:-1:exon

CDG60_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00400
old locus tag: CDG60_00400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005108919.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4
translation: MSKTTEKNEEKDLLFAGLARTARVANIPVDIFTYFFLICGFATCFLALIGNLKLGLIISGIIYLLLVVVTYQEDRGIQYLWFSIKRRLQRTKVFGGYSFDSHAKADDKNIEYSQKKLAGAEQMEINNLPYLSPINEHDIKLVNGDIFTVLKITGFPYETKSYAQLKTLKKYRADMFKQLGSRFVVSVYYDRHEVKTEIPPANGNEFSDSFNQKYYEKLSNERMFQNDIYVSLLVRKSNPSDPPLTRLKNLFFRSDNEEQMIAELNNAVSMFKEYLQDANPRQLGTYSKDSVLYSETVNFLGYLLNLEKAEIPLHPTEIRNYLGYTRRVFAPDGTIKFYHPSGELTAGAIYSLPTPSYPEGSDHTMLDEFLKVDHPLIISQTFMMMDRRKSISMSTTRQNQLKNAQDKSESQIEAINVAIDDLASGRILNGIYSLNVLVTSKTPSEFKEAMQKTSGAFQRNHMIPKKEDLISEPTFYSMLIGNYHLLQRPATINTTNFAGFASMHNSSTGKKDGNHWGENVIQLKTTSNTPYYFNFHEHDVGHTRITTGTGGGKTTVINTLLTASDKFKPYIFHFDFEYSASVWIKSMGGRHTVLSEMVKTGWNPLQLDDTEQNRLFLRNLFSFMAQDYNDNGNPKPLSTAEENKIKDVVDAVYSYEKHLRRLRNFIGLFGMAEDNNMAERMSKWVNDGVYANIFDNESDNFSIDGARIFGYEMKNVIDNDVVLGAMSMYIFHQIDISMSEGKPFIVVVEEGQRYISNPINLAWLKIMLTTYRRRNGMMIFVTPTPEVITRDDDLIGQFKTSILLPNDKANVATYMGNEKNNGLGCTQAEFDWVVNTPPYLRQFMIKNSHDSVISKLDLSNMSEIIPILSGNELRHNILEEILSKDENLTYSQWVHEFNERVKS
SIO_010081: CDG60_RS00400
subclass of: SO_0000673
so part of: CDG60_RS00400
location: complement(35179..37890)
location: region:35179-37890:-1
so has part: feature:35179-37890:-1:exon

WP_015060708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35179-37890:-1:exon

CDG60_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00405
old locus tag: CDG60_00405
so part of: sequence
location: complement(37902..38195)
location: region:37902-38195:-1
so has part: feature:37902-38195:-1:exon
subclass of: SO_0000010

position:37902:-1
position: 37902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38195:-1
position: 38195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37902-38195:-1:exon

CDG60_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00405
old locus tag: CDG60_00405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017480461.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MNLLNKLNPKQYAIVLFAVFYAQLANAAFGQKFAQKLNQFNDELVIIAAVAFVTGVICLAITMLGGGSEKVKRWGIGLIVAGILVFVAPDLGNFFFN
SIO_010081: CDG60_RS00405
subclass of: SO_0000673
so part of: CDG60_RS00405
location: complement(37902..38195)
location: region:37902-38195:-1
so has part: feature:37902-38195:-1:exon

WP_017480461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37902-38195:-1:exon

CDG60_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00410
old locus tag: CDG60_00410
so part of: sequence
location: complement(38206..38916)
location: region:38206-38916:-1
so has part: feature:38206-38916:-1:exon
subclass of: SO_0000010

position:38206:-1
position: 38206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38916:-1
position: 38916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38206-38916:-1:exon

CDG60_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00410
old locus tag: CDG60_00410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005108921.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MFKKLIIGLACSTPLFVYASPYDDLIHKHSVANGLDPNLVTAIMARESAFKPNARSHKDARGLMQVIPSTARLMGVDPSRLYEPEQSIIAGTRYLAFLNKRFNGDLTKMIAGYNAGHGAVEKFGGIPPYRETQNYVRLVSSKYQTLNGGGSFKTYTANNNPTEASRKSDILVLASWQQNQYPQYSASQNQSTENNSYSAQSEPVRLRVNNQPSNQPNVQQASFVQTLNKGQYVQVF
SIO_010081: CDG60_RS00410
subclass of: SO_0000673
so part of: CDG60_RS00410
location: complement(38206..38916)
location: region:38206-38916:-1
so has part: feature:38206-38916:-1:exon

WP_017480462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38206-38916:-1:exon

CDG60_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 2004650
locus tag: CDG60_RS00415
old locus tag: CDG60_00415
so part of: sequence
location: complement(38961..39161)
location: region:38961-39161:-1
so has part: feature:38961-39161:-1:exon
subclass of: SO_0000010

position:38961:-1
position: 38961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39161:-1
position: 39161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38961-39161:-1:exon

CDG60_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2004650
locus tag: CDG60_RS00415
old locus tag: CDG60_00415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005108922.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKREQLYVSDEFFAEMDEHFLRYKRGELKVPEEFKNRRLTKNLIYLIALDQFFKEKHKFSNRPFID
SIO_010081: CDG60_RS00415
subclass of: SO_0000673
so part of: CDG60_RS00415
location: complement(38961..39161)
location: region:38961-39161:-1
so has part: feature:38961-39161:-1:exon

WP_004999346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38961-39161:-1:exon