Dickeya dadantii 3937, complete sequence.
type: Entry
definition: Dickeya dadantii 3937, complete sequence.
sequence version: NC_014500.1
sequence date: 2022-12-19
sequence: sequence
division: CON
label: NC_014500.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02603422
keyword: RefSeq
source: Dickeya dadantii 3937
organism: Dickeya dadantii 3937
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Dickeya.
reference: 1
references: 21217001
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP002038.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nSource DNA and bacteria strain is available from Jeremy Glasner,\njglasner@wisc.edu.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/19/2022 11:51:03\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,430\nCDSs (total) :: 4,322\nGenes (coding) :: 4,238\nCDSs (with protein) :: 4,238\nGenes (RNA) :: 108\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 75\nncRNAs :: 11\nPseudo Genes (total) :: 84\nCDSs (without protein) :: 84\nPseudo Genes (ambiguous residues) :: 0 of 84\nPseudo Genes (frameshifted) :: 37 of 84\nPseudo Genes (incomplete) :: 60 of 84\nPseudo Genes (internal stop) :: 11 of 84\nPseudo Genes (multiple problems) :: 20 of 84\nCRISPR Arrays :: 4\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 4922802
topology: circular
so has quality: SO_0000988
location: 1..4922802
location: region:1-4922802:1
RO_0002162: 198628

NC_014500
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02603422
type: BioSample
SIO_000068: biosample

1
title: Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937
author: Glasner, J.D.
author: Yang, C.H.
author: Reverchon, S.
author: Hugouvieux-Cotte-Pattat, N.
author: Condemine, G.
author: Bohin, J.P.
author: Van Gijsegem, F.
author: Yang, S.
author: Franza, T.
author: Expert, D.
author: Plunkett, G. 3rd
author: San Francisco, M.J.
author: Charkowski, A.O.
author: Py, B.
author: Bell, K.
author: Rauscher, L.
author: Rodriguez-Palenzuela, P.
author: Toussaint, A.
author: Holeva, M.C.
author: He, S.Y.
author: Douet, V.
author: Boccara, M.
author: Blanco, C.
author: Toth, I.
author: Anderson, B.D.
author: Biehl, B.S.
author: Mau, B.
author: Flynn, S.M.
author: Barras, F.
author: Lindeberg, M.
author: Birch, P.R.
author: Tsuyumu, S.
author: Shi, X.
author: Hibbing, M.
author: Yap, M.N.
author: Carpentier, M.
author: Dassa, E.
author: Umehara, M.
author: Kim, J.F.
author: Rusch, M.
author: Soni, P.
author: Mayhew, G.F.
author: Fouts, D.E.
author: Gill, S.R.
author: Blattner, F.R.
author: Keen, N.T.
author: Perna, N.T.
journal: J Bacteriol
volume: 193
issue: 8
pages: 2076-2077
year: 2011
pubmed: 21217001

21217001
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (14-MAY-2010) Department of Genetics, University of Wisconsin, 425 Henry Mall, Madison, WI 53706, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4922802:1
position: 4922802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-4922802:1:source
so part of: sequence
organism: Dickeya dadantii 3937
mol type: genomic DNA
strain: 3937

198628
type: Taxonomy
SIO_000068: taxonomy

DDA3937_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: mioC
locus tag: DDA3937_RS00005
old locus tag: Dda3937_00155
so part of: sequence
location: complement(32..475)
location: region:32-475:-1
so has part: feature:32-475:-1:exon
subclass of: SO_0000010

9735696
type: Gene
SIO_000068: ncbigene

position:32:-1
position: 32
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475:-1
position: 475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32-475:-1:exon

DDA3937_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: mioC
locus tag: DDA3937_RS00005
old locus tag: Dda3937_00155
function: 2.1.1 information transfer; DNA related; DNA replication
function: 5.1 cell processes; cell division
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019844290.1
GO function: GO:0010181 - FMN binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FMN-binding protein MioC
translation: MADITLISGSTLGSAEYVTEHLESLLQQHDFTTTLLHGPELDEVTPENLWLVVTSTHGAGDLPDNLQPFYDDLQTKRPDLSAVRYGAIGIGSSEYDTFCGAIVKVDQLLQDLGARRIGDMLKIDITQHDIPEDPAEVWLGSWVNLLK
SIO_010081: DDA3937_RS00005
subclass of: SO_0000673
so part of: DDA3937_RS00005
location: complement(32..475)
location: region:32-475:-1
so has part: feature:32-475:-1:exon

WP_013315713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32-475:-1:exon

DDA3937_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: asnC
locus tag: DDA3937_RS00010
old locus tag: Dda3937_00156
so part of: sequence
location: complement(567..1031)
location: region:567-1031:-1
so has part: feature:567-1031:-1:exon
subclass of: SO_0000010

9731388
type: Gene
SIO_000068: ncbigene

position:567:-1
position: 567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031:-1
position: 1031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567-1031:-1:exon

DDA3937_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: asnC
locus tag: DDA3937_RS00010
old locus tag: Dda3937_00156
function: asnC regulates the expression of the genes asnA, asnC and gidA involved in the synthesis of asparagine
function: 1.5.1.6 metabolism; building block biosynthesis; amino acids; asparagine
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.2 regulation; type of regulation; transcriptional level; activator
function: 3.1.2.3 regulation; type of regulation; transcriptional level; repressor
function: 3.3.2 regulation; genetic unit regulated; regulon
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315714.1
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator AsnC
translation: MAADTYTMDELDRGILNALMENARTPYAELAKQFSVSPGTIHVRVEKMKQAGIIVGTRLDVNPKQLGYDVCCFIGIILKSAKDYPSAVEKLSNLEEVVEAYYTTGHYSIFIKVMCRSIDALQHVLINKIQTIDEIQSTETLISLQNPIMRTIVP
SIO_010081: DDA3937_RS00010
subclass of: SO_0000673
so part of: DDA3937_RS00010
location: complement(567..1031)
location: region:567-1031:-1
so has part: feature:567-1031:-1:exon

WP_013315714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567-1031:-1:exon

DDA3937_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: viaA
locus tag: DDA3937_RS00015
old locus tag: Dda3937_00157
so part of: sequence
location: complement(1178..2653)
location: region:1178-2653:-1
so has part: feature:1178-2653:-1:exon
subclass of: SO_0000010

9731389
type: Gene
SIO_000068: ncbigene

position:1178:-1
position: 1178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2653:-1
position: 2653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178-2653:-1:exon

DDA3937_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: viaA
locus tag: DDA3937_RS00015
old locus tag: Dda3937_00157
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019844291.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase RavA stimulator ViaA
translation: MLTLESLEMLLSIDENDLLDDVIITLMATPQLMMFFDKYPRLKAAVMRDLPEWKENLRQRLRNTQAPPELEKEFTCYQQTQLISDHTFQSNLPDIMSTLHNVDSPFLNQAEKLVHSASHSSESRISSSQHSLFMQRWRLSLTLQTLNLHQQIMEQERDQLLDEIQKRLTISGALEPILADNDTAAGRLWDLSASKRMKQPFNALLEVGAFLRQQPELQRLAERLGRSRETKSVLSQDAPKEAFQVMVREPAFAPEQVSGIHQSDDILRLLPTELSTLGISELEFEFYRRLSEHRLLTYRLQGESWREKTLERPVVHQHNEQQPRGPFIVCVDTSGSMGGFNERCAKAFCLALMRIALADNRRCYIMLFSTGIVSYDLTSESGLEEAIRFLSQTFRGGTDLNSCLSALLEKMDSQSWQDADAVIISDFIAQRLPDELVNEVKRRQHRLQHRFHAVAMSAHGKPGILRIFDHIWRFDTGLKSRLLRRFQHEKV
SIO_010081: DDA3937_RS00015
subclass of: SO_0000673
so part of: DDA3937_RS00015
location: complement(1178..2653)
location: region:1178-2653:-1
so has part: feature:1178-2653:-1:exon

WP_013315715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1178-2653:-1:exon

DDA3937_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ravA
locus tag: DDA3937_RS00020
old locus tag: Dda3937_00158
so part of: sequence
location: complement(2659..4155)
location: region:2659-4155:-1
so has part: feature:2659-4155:-1:exon
subclass of: SO_0000010

9731390
type: Gene
SIO_000068: ncbigene

position:2659:-1
position: 2659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4155:-1
position: 4155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2659-4155:-1:exon

DDA3937_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ravA
locus tag: DDA3937_RS00020
old locus tag: Dda3937_00158
EC number: 3.6.1.15
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886740.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase RavA
translation: MIQPTALADRISRLSHALEHGLYERQHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLKYAFRHARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYQRLTTGYLPEAEIVFLDEIWKAGPAILNTLLTAINERRFRNGNSEEPIPMRLLVTASNELPEADSSLEALYDRMLIRIWLDRVQDKHNFRAMLTASPGEQDNLVSPALSVSDEEYQQWQSHIDHIPLPENCFELIYQLRQRLDSQDGSPYVSDRRWKKAIRLLQACAFFSGRETITPVDLILLKDCLWHDLGTHDLVEQQLQQLMSEQAYQQRALLYRLQQLNVKRQQYQQQQSEQQAFRVERQVNFFGRKPHHTLPESLTSTELTLMLQKPLLLNDYTVTHVVLDREALAGWLQKGGEIRGKLNGVGFSQRLDMEVDERQHLIIRDISLQSTVLSLPGVLKGELPEEMLQEYETLKIQLREQRRLFERHQPCLFVPKEWLARIEESLQQVDEQIEQSQRE
SIO_010081: DDA3937_RS00020
subclass of: SO_0000673
so part of: DDA3937_RS00020
location: complement(2659..4155)
location: region:2659-4155:-1
so has part: feature:2659-4155:-1:exon

WP_013315716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2659-4155:-1:exon

DDA3937_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: kup
locus tag: DDA3937_RS00025
old locus tag: Dda3937_00159
so part of: sequence
location: 4431..6299
location: region:4431-6299:1
so has part: feature:4431-6299:1:exon
subclass of: SO_0000010

9731391
type: Gene
SIO_000068: ncbigene

position:4431:1
position: 4431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6299:1
position: 6299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4431-6299:1:exon

DDA3937_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: kup
locus tag: DDA3937_RS00025
old locus tag: Dda3937_00159
function: 4.2.A.72 transport; Electrochemical potential driven transporters; Porters (Uni-, Sym- and Antiporters); The K+ uptake permease (KUP) Family
function: 5.5.1 cell processes; adaptation to stress; osmotic pressure
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 4.S.96 transport; substrate; K+
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: low affinity potassium transporter Kup
translation: MNSEHKRSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVEPDSVFGFLSLIFWLLVLVVSLKYLSYVMRADNAGEGGILTLMSLAGRNTSDKVTAMVVIMGLIGGSFFYGEVVITPAISVMSAIEGLDIVAPSLDTYIVPISIVVLTLLFMIQKHGTGRVGSLFAPIMTVWFLSLGVLGARSIIANPEVLQALNPKWAINFFIQYKAVSFFALGAVVLAITGVEALYADMGHFGKLPIRIAWFSAVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLVLATLATIIASQAVISGVFSLTRQAVRLGYLPPMRIVHTSDMESGQIYIPFINWLLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSCTVAVKNWHWYRHLVWLLLVALLAIDLPMFLANVVKIISGGWLPLALGMVMFTIMTTWKSERFRLLRRIHEHGNSLDAMITSLEKNPPVRVTGTAVYLSRATHVIPFALLHNLKHNKVLHERVVLLTMRTEDAPYVHNARRVSVEQLSPTFWRVVASYGWRETPNVEEVFHRCWQDGLTCQMMETTFFLSNESLMMGNRPWYLRVRGKLFMMLSRNALRAADQFEIPPNRLIELGIQVEI
SIO_010081: DDA3937_RS00025
subclass of: SO_0000673
so part of: DDA3937_RS00025
location: 4431..6299
location: region:4431-6299:1
so has part: feature:4431-6299:1:exon

WP_013315717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4431-6299:1:exon

DDA3937_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rbsD
locus tag: DDA3937_RS00030
old locus tag: Dda3937_02355
so part of: sequence
location: 6696..7115
location: region:6696-7115:1
so has part: feature:6696-7115:1:exon
subclass of: SO_0000010

9731392
type: Gene
SIO_000068: ncbigene

position:6696:1
position: 6696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7115:1
position: 7115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6696-7115:1:exon

DDA3937_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rbsD
locus tag: DDA3937_RS00030
old locus tag: Dda3937_02355
EC number: 5.4.99.62
function: 1.1.1 metabolism; carbon utilization; carbon compounds
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 4.S.48 transport; substrate; D-ribose
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004393068.1
GO function: GO:0016872 - intramolecular lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-ribose pyranase
translation: MKKGALLNSDISSVISRLGHTDQIVIADAGLPIPETTTRIDLALTHNVPGFLQVLNVVTAEMQVEAAILAQEIIEKNTQLHDALLKQLAQLEQHQGNTISLHYVSHEDFKKQSGQSRAIIRTGECSPYANVILCAGVTF
SIO_010081: DDA3937_RS00030
subclass of: SO_0000673
so part of: DDA3937_RS00030
location: 6696..7115
location: region:6696-7115:1
so has part: feature:6696-7115:1:exon

WP_013315718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6696-7115:1:exon

DDA3937_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rbsA
locus tag: DDA3937_RS00035
old locus tag: Dda3937_02356
so part of: sequence
location: 7123..8628
location: region:7123-8628:1
so has part: feature:7123-8628:1:exon
subclass of: SO_0000010

9731393
type: Gene
SIO_000068: ncbigene

position:7123:1
position: 7123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8628:1
position: 8628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7123-8628:1:exon

DDA3937_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rbsA
locus tag: DDA3937_RS00035
old locus tag: Dda3937_02356
function: 4.3.A.1.am transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, ATP binding and membrane component
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009115037.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose ABC transporter ATP-binding protein RbsA
translation: MQPLLQLQGITKTFPGVKALSGAALNVYPGKVMALVGENGAGKSTMMKVLTGIYRKDAGSIHFLGKDVDFSGPKASQEAGIGIIHQELNLIPQLTIAENIFLGREFTNRLGRIDWKQMYAEADKLLKRLNLRYDSRRLVGELSIGDQQMVEIAKVLSFESRVIIMDEPTDALTDTETASLFSVIKELQSQGCGIVYISHRLKEIFEICDDVTVFRDGQFIGERPVSELQEDSLIEMMVGRKLEDQYPRLNQAPGEVRLQVSELSGPGVENVSFTLRKGEILGVAGLMGAGRTELMKVLYGALPRTHGKVHLDGKDVVTRSPQDGLASGIVYISEDRKHDGLVLGMSVKENMSLTALRYFSNAAGSLRHGDEQQAVNDFIRMFNIRTPSMSQPIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKQEGLSIILVSSEMPEVLGMSDRIIVMHEGRLSGEFPIEQATQETLMAAAVGKQYGVKQE
SIO_010081: DDA3937_RS00035
subclass of: SO_0000673
so part of: DDA3937_RS00035
location: 7123..8628
location: region:7123-8628:1
so has part: feature:7123-8628:1:exon

WP_013315719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7123-8628:1:exon

DDA3937_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rbsC
locus tag: DDA3937_RS00040
old locus tag: Dda3937_02357
so part of: sequence
location: 8636..9604
location: region:8636-9604:1
so has part: feature:8636-9604:1:exon
subclass of: SO_0000010

9731394
type: Gene
SIO_000068: ncbigene

position:8636:1
position: 8636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9604:1
position: 9604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8636-9604:1:exon

DDA3937_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rbsC
locus tag: DDA3937_RS00040
old locus tag: Dda3937_02357
function: 1.1.1 metabolism; carbon utilization; carbon compounds
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 4.S.48 transport; substrate; D-ribose
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005976511.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose ABC transporter permease
translation: MSSQTITAKRWLSKEWLMEQKSLIALLILIAVVSSMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALTGAVAASIVGLEINALVAVFAALALGAVIGAGTGIVIAKGRVQAFIATLVMMLLLRGVTMVYTNGSPINTGFSDSADALGWFGIGRPLGIPTPIWIMAVVFLATWYMLHHTRIGRYIYALGGNEAATRLSGISVDRVKVVVYALCGLLSALAGIIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLSGGKGRVVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKGSK
SIO_010081: DDA3937_RS00040
subclass of: SO_0000673
so part of: DDA3937_RS00040
location: 8636..9604
location: region:8636-9604:1
so has part: feature:8636-9604:1:exon

WP_013315720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8636-9604:1:exon

DDA3937_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rbsB
locus tag: DDA3937_RS00045
old locus tag: Dda3937_02358
so part of: sequence
location: 9631..10518
location: region:9631-10518:1
so has part: feature:9631-10518:1:exon
subclass of: SO_0000010

9731395
type: Gene
SIO_000068: ncbigene

position:9631:1
position: 9631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10518:1
position: 10518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9631-10518:1:exon

DDA3937_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rbsB
locus tag: DDA3937_RS00045
old locus tag: Dda3937_02358
function: 1.1.1 metabolism; carbon utilization; carbon compounds
function: 4.3.A.1.p transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, periplasmic binding component
function: 7.2 location of gene products; periplasmic space
function: 4.S.48 transport; substrate; D-ribose
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017375080.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose ABC transporter substrate-binding protein RbsB
translation: MNLKKIATLVSAVALSAAVSTNALAKDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVILDSQNNPAKELSNVQDLTVRGTKLLLINPTDSNAVGNAVKLANQAKIPVITLDRVAASGEVVSHVASDNAFGGKVAGDFIAKKLGEGAKVIQLEGLAGTSAARERGAGFMKSAEKNKFAMLASQPADFDRTKGLNVMQNLLTAHPDVKAVFAQNDEMALGALRALQTAGRDDVLVVGFDGTADGVKAVEGGKLAATVAQRPEQIGIIGVETADKVLKGEKVQPIIPVDLKLVTK
SIO_010081: DDA3937_RS00045
subclass of: SO_0000673
so part of: DDA3937_RS00045
location: 9631..10518
location: region:9631-10518:1
so has part: feature:9631-10518:1:exon

WP_013315721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9631-10518:1:exon

DDA3937_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rbsK
locus tag: DDA3937_RS00050
old locus tag: Dda3937_02359
so part of: sequence
location: 10604..11530
location: region:10604-11530:1
so has part: feature:10604-11530:1:exon
subclass of: SO_0000010

9731396
type: Gene
SIO_000068: ncbigene

position:10604:1
position: 10604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11530:1
position: 11530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10604-11530:1:exon

DDA3937_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rbsK
locus tag: DDA3937_RS00050
old locus tag: Dda3937_02359
EC number: 2.7.1.15
function: 1.1.1 metabolism; carbon utilization; carbon compounds
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315722.1
GO function: GO:0004747 - ribokinase activity [Evidence IEA]
GO process: GO:0006014 - D-ribose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribokinase
translation: MKSGKLVVLGSINADHILNLAQFPRPGETVIGKQYGVAFGGKGANQAVAAGRSGADIEFIACVGADDIGERIRQQLIKDRIDVSAVEAISGQTTGVALIFVNGEAENMIGIHAGANAAVTPDYLNRYQQKIIDASALLMQLESPLETVTAAARLAHDHGTKVILNPAPACSLPDELLSLVDMITPNETEAQILTGVAVETEDDAQRAAQVLHDKGIATVLITLGSRGVWLSEQGKGQRIPGFRVKAVDTIAAGDTFNGALVTALLESRPMEAAVKFAHAAAAIAVTRHGAQPSVPWREEIDAFLNAQE
SIO_010081: DDA3937_RS00050
subclass of: SO_0000673
so part of: DDA3937_RS00050
location: 10604..11530
location: region:10604-11530:1
so has part: feature:10604-11530:1:exon

WP_013315722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10604-11530:1:exon

DDA3937_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rbsR
locus tag: DDA3937_RS00055
old locus tag: Dda3937_02360
so part of: sequence
location: 11543..12538
location: region:11543-12538:1
so has part: feature:11543-12538:1:exon
subclass of: SO_0000010

9731397
type: Gene
SIO_000068: ncbigene

position:11543:1
position: 11543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12538:1
position: 12538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11543-12538:1:exon

DDA3937_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rbsR
locus tag: DDA3937_RS00055
old locus tag: Dda3937_02360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015962416.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose operon transcriptional repressor RbsR
translation: MKDVARLAGVSTSTVSHVINNNRYVSDAIRDRVMKAVEELNYAPSALARSLKINQTRTIGMLLTASSNPFYAEVVRGVERCCYERGYSLILCNTEGDHHRLSRSLETLLQKRVDGLLLMCTESHMPSPDIIRRYPSIPVVMMDWAPFEGSSDVIKDNSLQGGEMATHYLISQGYRNIACIAGPQDKTTAHNRLEGYRKAMYQAGLPILPGYEVVGDFEFETGFRAMQQLLALPERPDAVFTSNDAMAVGVYRALHDAGLSIPDDMAVVGYDDIELARYLSPPLTTIHQPKDELGELAIDTLLHRLEHPDTEHNVLVLTPELIVRDSVGKRS
SIO_010081: DDA3937_RS00055
subclass of: SO_0000673
so part of: DDA3937_RS00055
location: 11543..12538
location: region:11543-12538:1
so has part: feature:11543-12538:1:exon

WP_033111483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11543-12538:1:exon

DDA3937_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00060
old locus tag: Dda3937_04660
so part of: sequence
location: 12976..14517
location: region:12976-14517:1
so has part: feature:12976-14517:1:exon
subclass of: SO_0000573

9731398
type: Gene
SIO_000068: ncbigene

position:12976:1
position: 12976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14517:1
position: 14517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12976-14517:1:exon

DDA3937_RS00060
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 198628
locus tag: DDA3937_RS00060
old locus tag: Dda3937_04660
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DDA3937_RS00060
subclass of: SO_0000673
so part of: DDA3937_RS00060
location: 12976..14517
location: region:12976-14517:1
so has part: feature:12976-14517:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12976-14517:1:exon

DDA3937_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00065
old locus tag: Dda3937_04671
so part of: sequence
location: 14604..14679
location: region:14604-14679:1
so has part: feature:14604-14679:1:exon
subclass of: SO_0000663

9731399
type: Gene
SIO_000068: ncbigene

position:14604:1
position: 14604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14679:1
position: 14679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14604-14679:1:exon

DDA3937_RS00065
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 198628
locus tag: DDA3937_RS00065
old locus tag: Dda3937_04671
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:14638..14640,aa:Glu,seq:ttc)
SIO_010081: DDA3937_RS00065
subclass of: SO_0000673
so part of: DDA3937_RS00065
location: 14604..14679
location: region:14604-14679:1
so has part: feature:14604-14679:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14604-14679:1:exon

DDA3937_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00070
old locus tag: Dda3937_04661
so part of: sequence
location: 14874..17781
location: region:14874-17781:1
so has part: feature:14874-17781:1:exon
subclass of: SO_0000573

9731400
type: Gene
SIO_000068: ncbigene

position:14874:1
position: 14874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17781:1
position: 17781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14874-17781:1:exon

DDA3937_RS00070
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 198628
locus tag: DDA3937_RS00070
old locus tag: Dda3937_04661
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DDA3937_RS00070
subclass of: SO_0000673
so part of: DDA3937_RS00070
location: 14874..17781
location: region:14874-17781:1
so has part: feature:14874-17781:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14874-17781:1:exon

DDA3937_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rrf
locus tag: DDA3937_RS00075
old locus tag: Dda3937_04662
so part of: sequence
location: 17890..18005
location: region:17890-18005:1
so has part: feature:17890-18005:1:exon
subclass of: SO_0000573

9731401
type: Gene
SIO_000068: ncbigene

position:17890:1
position: 17890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18005:1
position: 18005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17890-18005:1:exon

DDA3937_RS00075
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 198628
gene: rrf
locus tag: DDA3937_RS00075
old locus tag: Dda3937_04662
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DDA3937_RS00075
subclass of: SO_0000673
so part of: DDA3937_RS00075
location: 17890..18005
location: region:17890-18005:1
so has part: feature:17890-18005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17890-18005:1:exon

DDA3937_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: mobB
locus tag: DDA3937_RS00080
old locus tag: Dda3937_01107
so part of: sequence
location: complement(18263..18790)
location: region:18263-18790:-1
so has part: feature:18263-18790:-1:exon
subclass of: SO_0000010

9731402
type: Gene
SIO_000068: ncbigene

position:18263:-1
position: 18263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18790:-1
position: 18790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18263-18790:-1:exon

DDA3937_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: mobB
locus tag: DDA3937_RS00080
old locus tag: Dda3937_01107
function: 1.5.3.4 metabolism; building block biosynthesis; cofactor, small molecule carrier; molybdenum
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019452171.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-guanine dinucleotide biosynthesis protein MobB
translation: MTEIPLLAITAHSGTGKTTLLKQLIPLLNAMGIRVGIIKHTHHDMDVDKPGKDSYELRKAGADQTLVASNTRWALMTETPEQQEPDLYFLASRMDSSKLDLILVEGFKHEPVDKILLYRCGSGRDIAALIDADTLAVATDTALTLALPCLDLNQPAQIAAFIRDWLRRRTGAAGD
SIO_010081: DDA3937_RS00080
subclass of: SO_0000673
so part of: DDA3937_RS00080
location: complement(18263..18790)
location: region:18263-18790:-1
so has part: feature:18263-18790:-1:exon

WP_013315724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18263-18790:-1:exon

DDA3937_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: mobA
locus tag: DDA3937_RS00085
old locus tag: Dda3937_01108
so part of: sequence
location: complement(18783..19358)
location: region:18783-19358:-1
so has part: feature:18783-19358:-1:exon
subclass of: SO_0000010

9731403
type: Gene
SIO_000068: ncbigene

position:18783:-1
position: 18783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19358:-1
position: 19358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18783-19358:-1:exon

DDA3937_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: mobA
locus tag: DDA3937_RS00085
old locus tag: Dda3937_01108
EC number: 2.7.7.77
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848456.1
GO process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdenum cofactor guanylyltransferase MobA
translation: MITGVILAGGQSSRMGGNDKGLIELEGKPLYQHVLDRLKPQVDTLLINANRHQERYQQSGYPVIGDINRNFSGPLAGIFTGLSLAKTDWVVFVPCDVPALPVDLVSRLLPLNDNYLAAYATDGSREHPTLLAIHTSLIGKLEAYLSNGDRKLMLFLEQIGAKAVSFADQPLSFRNLNTPEDLARWQEPHHD
SIO_010081: DDA3937_RS00085
subclass of: SO_0000673
so part of: DDA3937_RS00085
location: complement(18783..19358)
location: region:18783-19358:-1
so has part: feature:18783-19358:-1:exon

WP_033112173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18783-19358:-1:exon

DDA3937_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00090
old locus tag: Dda3937_01109
so part of: sequence
location: 19469..19738
location: region:19469-19738:1
so has part: feature:19469-19738:1:exon
subclass of: SO_0000010

9731404
type: Gene
SIO_000068: ncbigene

position:19469:1
position: 19469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19738:1
position: 19738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19469-19738:1:exon

DDA3937_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00090
old locus tag: Dda3937_01109
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005191202.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YihD family protein
translation: MKCHRLNELIELLHPAWQKEPDLNLVQFLQKLAQEAGFKGALSDLTDDILIYHLKLRDADSAQPIPGLQKDYEEDFKTALLRARGVIKD
SIO_010081: DDA3937_RS00090
subclass of: SO_0000673
so part of: DDA3937_RS00090
location: 19469..19738
location: region:19469-19738:1
so has part: feature:19469-19738:1:exon

WP_013315726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19469-19738:1:exon

DDA3937_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00095
old locus tag: Dda3937_01110
so part of: sequence
location: 19780..20766
location: region:19780-20766:1
so has part: feature:19780-20766:1:exon
subclass of: SO_0000010

9731405
type: Gene
SIO_000068: ncbigene

position:19780:1
position: 19780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20766:1
position: 20766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19780-20766:1:exon

DDA3937_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00095
old locus tag: Dda3937_01110
EC number: 2.7.11.1
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019846536.1
GO function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO process: GO:0006468 - protein phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine/threonine protein kinase
translation: MHDSVFNFHTLSPDVVMDALWSVDIRVDSGLTALNSYENRVYQFSDEERKRYVVKFYRPQRWNAAQISEEHHFAAELFDDEVPVVAPLALQGSTLHEHDGFWFAVFPSVGGRQYEMDNDDQLEEVGRYLGRIHQTGSRNLFSTRPTIGLLEYLDDPLVTLTDSSLISDAQKAPFLTVTTRLIDEVKQHWNTHWQARRLHGDCHPGNILWRDGPLFVDLDDARNGPAVQDLWMLLHGDRQEQRIQLDILLDAYSEFASFDEAELALIEPLRAMRMVHYLAWVARRWHDPAFPRSFPWMQEADFWAKQATIFTEQVRLLQEPPLQLTPMY
SIO_010081: DDA3937_RS00095
subclass of: SO_0000673
so part of: DDA3937_RS00095
location: 19780..20766
location: region:19780-20766:1
so has part: feature:19780-20766:1:exon

WP_013315727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19780-20766:1:exon

DDA3937_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: dsbA
locus tag: DDA3937_RS00100
old locus tag: Dda3937_01111
so part of: sequence
location: 20789..21412
location: region:20789-21412:1
so has part: feature:20789-21412:1:exon
subclass of: SO_0000010

9731406
type: Gene
SIO_000068: ncbigene

position:20789:1
position: 20789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21412:1
position: 21412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20789-21412:1:exon

DDA3937_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: dsbA
locus tag: DDA3937_RS00100
old locus tag: Dda3937_01111
function: 2.3.3 information transfer; protein related; posttranslational modification
function: 2.3.4 information transfer; protein related; chaperoning, folding
function: 5.5 cell processes; adaptation to stress
function: 7.2 location of gene products; periplasmic space
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315728.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiol:disulfide interchange protein DsbA
translation: MKKLWLALAGMVLAFSASAADFSDGKQYATLDKPVPQSPQVLEFFSFYCPHCYQFAQVYHIPDAIQKALPADAKLTKYHVDFLGELGKELTQAWAVAIALGVEDKVSPLMFDAVQKTQTVKQPQDIRQVFVAAGVKAEDYDSALNSFVVKSLVAQQEKAAADLQLRGVPAVFVNGKYMIKSDGLDTSSMDNYVKQYADVVKFLLSQK
SIO_010081: DDA3937_RS00100
subclass of: SO_0000673
so part of: DDA3937_RS00100
location: 20789..21412
location: region:20789-21412:1
so has part: feature:20789-21412:1:exon

WP_013315728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20789-21412:1:exon

DDA3937_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: polA
locus tag: DDA3937_RS00105
old locus tag: Dda3937_01112
so part of: sequence
location: 21791..24625
location: region:21791-24625:1
so has part: feature:21791-24625:1:exon
subclass of: SO_0000010

9731407
type: Gene
SIO_000068: ncbigene

position:21791:1
position: 21791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24625:1
position: 24625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21791-24625:1:exon

DDA3937_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: polA
locus tag: DDA3937_RS00105
old locus tag: Dda3937_01112
EC number: 2.7.7.7
function: 2.1.1 information transfer; DNA related; DNA replication
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005191199.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0006261 - DNA-templated DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase I
translation: MVQIAENPLILVDGSSYLYRAYHAFPPLTNGAGEPTGAMYGVLNMLRSLLQQYHPSHVAVVFDAKGKTFRDDLFEHYKSHRPPMPDDLRAQIEPLHRMVKAMGLPLLSVSGVEADDVIGTLAQQAERAGKPVLISTGDKDMAQLVTPNITLINTMNNTILGPDEVCAKYGIPPSLIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYADLDKIASLTFRGAKTMAAKLEQNKELAYLSYQLATIKTDVELELGCEQLTVNEPDVAELHELFTRYEFKRWLADVEDGKWLQGGRKSQPAVPFVKATVEATPKEAASVLSQDGYVTILDEKVLLDWLERIKTAALFSFDTETDGLDTLTANLVGVSLAIKPGEAAYLPLGHITSRVYSSNIYSSTVSPATRMSTQLDRDRVLALLKPLLEDDGIRKIGQNLKFDKGVMARYGIDLRGIAFDTMLESYVLDSVAGRHDMDSLSERYLQHKTITFEEIAGKGKNQLTFDQIPLAQASVYAAEDADVTLRLHETLWAKLEPQQELRKVFQNIDMPLVPVLSRIERTGVLIDTTILAEHSRELTQRLAELEVQAHELAGEAFNLSSPKQLGAILYEKLQLPVIKKTPKGAPSTNEEVLAELALDYPLPKLILEHRGLAKLKSTYTDKLPQMINPLTRRVHTSYHQAVTATGRLSSSDPNLQNIPVRNEEGRRIRQAFIAPEGYRILAADYSQIELRIMAHLSRDAGLLRAFSHGLDIHRATAAEVFGLPLDRVTTEQRRSAKAINFGLIYGMSAFGLSRQLAIPRSEAQKYMNLYFERYPGVQEYMERTRQQAVDQGYVSTLDGRRLYLPDIHSRNVNSRKAAERAAINAPMQGTAADIIKKAMIAIDAWLRQEKPLVTMLMQVHDELVFEVHHSVLDEASAKIRNLMEGCMQLDVPLQVDIGTGSNWDQAH
SIO_010081: DDA3937_RS00105
subclass of: SO_0000673
so part of: DDA3937_RS00105
location: 21791..24625
location: region:21791-24625:1
so has part: feature:21791-24625:1:exon

WP_013315729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21791-24625:1:exon

DDA3937_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: yihA
locus tag: DDA3937_RS00110
old locus tag: Dda3937_01113
so part of: sequence
location: complement(25090..25734)
location: region:25090-25734:-1
so has part: feature:25090-25734:-1:exon
subclass of: SO_0000010

23677375
type: Gene
SIO_000068: ncbigene

position:25090:-1
position: 25090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25734:-1
position: 25734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25090-25734:-1:exon

DDA3937_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: yihA
locus tag: DDA3937_RS00110
old locus tag: Dda3937_01113
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848451.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis GTP-binding protein YihA/YsxC
translation: MTQQYNYHVTHFVTSAPDIRHLPADSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGVRLVDLPGYGYAEVPEEMKRKWQRALGEYLQKRDCLKGLVVLMDIRHPLKDLDQQMLEWAVDVGLPVLVLLTKADKLAQGARKSQLNMVREAVLPFMGDIQVEAFSSLKKTGVDKLRQKLDSWFSTLPSAELQSQPESDL
SIO_010081: DDA3937_RS00110
subclass of: SO_0000673
so part of: DDA3937_RS00110
location: complement(25090..25734)
location: region:25090-25734:-1
so has part: feature:25090-25734:-1:exon

WP_033111484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25090-25734:-1:exon

DDA3937_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: yihI
locus tag: DDA3937_RS00115
old locus tag: Dda3937_01114
so part of: sequence
location: 25958..26491
location: region:25958-26491:1
so has part: feature:25958-26491:1:exon
subclass of: SO_0000010

9731410
type: Gene
SIO_000068: ncbigene

position:25958:1
position: 25958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26491:1
position: 26491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25958-26491:1:exon

DDA3937_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: yihI
locus tag: DDA3937_RS00115
old locus tag: Dda3937_01114
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886725.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Der GTPase-activating protein YihI
translation: MKQPSKGAERKASAPKIKRKSREQLDLEARDRKRQKKHRGHAAGSRAQPSGDHQQNAASGKAKDPRIGSKKPVSLLPEGTTVAVKAPVPAAEKPVRQSPQDELEMLENDPRLDALLDRLEKGETLSAKEQSWLDETLDRIDILMEQLGISLDDDEEDEEQEEDMLQLLRRGNPKDGY
SIO_010081: DDA3937_RS00115
subclass of: SO_0000673
so part of: DDA3937_RS00115
location: 25958..26491
location: region:25958-26491:1
so has part: feature:25958-26491:1:exon

WP_013315731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25958-26491:1:exon

DDA3937_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: hemN
locus tag: DDA3937_RS00120
old locus tag: Dda3937_01115
so part of: sequence
location: 26673..28046
location: region:26673-28046:1
so has part: feature:26673-28046:1:exon
subclass of: SO_0000010

9731411
type: Gene
SIO_000068: ncbigene

position:26673:1
position: 26673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28046:1
position: 28046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26673-28046:1:exon

DDA3937_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: hemN
locus tag: DDA3937_RS00120
old locus tag: Dda3937_01115
EC number: 1.3.98.3
function: 1.5.3.12 metabolism; building block biosynthesis; cofactor, small molecule carrier; heme, porphyrine
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462884.1
GO function: GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxygen-independent coproporphyrinogen III oxidase
translation: MPEQTIDWDLSLIQKYNYSGPRYTSYPTALEFSDSYDNAAFAQAVARYPNRPLSLYLHIPFCHRLCYFCGCNKLVTRQLHKADEYLDRLALEIRQRAPLFAGRVVTQMHWGGGTPTFLNKTQISRLMGLLRQYFHFAEQAEMSLEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEAFIFALIERAKALGFASTNIDLIYGLPKQTPDSFAFTLQRVAALRPDRLSVFNYAHLPSLFAAQRKIKEADLPDAEQKLAILQQTIQSLTAAGYQFIGMDHFARPDDELAVAQREGKLHRNFQGYTTQGDTDLLGLGVSAISMIGDSYAQNQKELKQYYADVEQHGHALWRGLALTRDDCLRRDVIKALICHFQLEFAAIERAYGLSFGEYFREDLALLAPMAQDGLVDILPDRIQVTPKGRLLIRNICMCFDVYLRSKMRERQFSRVI
SIO_010081: DDA3937_RS00120
subclass of: SO_0000673
so part of: DDA3937_RS00120
location: 26673..28046
location: region:26673-28046:1
so has part: feature:26673-28046:1:exon

WP_013315732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26673-28046:1:exon

DDA3937_RS22930
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS22930
so part of: sequence
location: complement(28121..28243)
location: region:28121-28243:-1
so has part: feature:28121-28243:-1:exon
subclass of: SO_0000010

56705024
type: Gene
SIO_000068: ncbigene

position:28121:-1
position: 28121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28243:-1
position: 28243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28121-28243:-1:exon

DDA3937_RS22930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS22930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886722.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YshB family small membrane protein
translation: MLESIFSAVTHGAEISSAVGHSSQTAIAAVLCAALINFFS
SIO_010081: DDA3937_RS22930
subclass of: SO_0000673
so part of: DDA3937_RS22930
location: complement(28121..28243)
location: region:28121-28243:-1
so has part: feature:28121-28243:-1:exon

WP_022635449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28121-28243:-1:exon

DDA3937_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: glnG
locus tag: DDA3937_RS00125
old locus tag: Dda3937_01116
so part of: sequence
location: complement(28390..29802)
location: region:28390-29802:-1
so has part: feature:28390-29802:-1:exon
subclass of: SO_0000010

9731412
type: Gene
SIO_000068: ncbigene

position:28390:-1
position: 28390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29802:-1
position: 29802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28390-29802:-1:exon

DDA3937_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: glnG
locus tag: DDA3937_RS00125
old locus tag: Dda3937_01116
function: GlnG is involved in the activation of nitrogen assimilatory genes such as glnA, argT, hisY, nagP, nifL...
function: 3.1.2.4.3 regulation; type of regulation; transcriptional level; complex regulation; two component regulatory systems (external signal)
function: 1.5.1.2 metabolism; building block biosynthesis; amino acids; glutamine
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.2 regulation; type of regulation; transcriptional level; activator
function: 3.1.2.3 regulation; type of regulation; transcriptional level; repressor
function: 3.3.1 regulation; genetic unit regulated; operon
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogen regulation protein NR(I)
translation: MQRGIVWIVDDDSSIRWVLERALTGAGLTCATFDNGTQALNALTTQTPDVLLSDIRMPGMDGLALLQQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYMEQQQPVRSQPISGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANQIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAAVKVDVRIIAATHQNLELRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARYFLQATARELGVEPKNLHPETEAALTRLPWPGNVRQLENTCRWLTVMAAGQEVLIQDLPPELFETTAPDATVHVMPDSWATLLAQWADRALRSGHQNLLAEAQPEMERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME
SIO_010081: DDA3937_RS00125
subclass of: SO_0000673
so part of: DDA3937_RS00125
location: complement(28390..29802)
location: region:28390-29802:-1
so has part: feature:28390-29802:-1:exon

WP_013315733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28390-29802:-1:exon

DDA3937_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: glnL
locus tag: DDA3937_RS00130
old locus tag: Dda3937_01117
so part of: sequence
location: complement(29811..30860)
location: region:29811-30860:-1
so has part: feature:29811-30860:-1:exon
subclass of: SO_0000010

9731413
type: Gene
SIO_000068: ncbigene

position:29811:-1
position: 29811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30860:-1
position: 30860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29811-30860:-1:exon

DDA3937_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: glnL
locus tag: DDA3937_RS00130
old locus tag: Dda3937_01117
function: 3.1.2.4.3 regulation; type of regulation; transcriptional level; complex regulation; two component regulatory systems (external signal)
function: 1.5.1.2 metabolism; building block biosynthesis; amino acids; glutamine
function: 2.3.3 information transfer; protein related; posttranslational modification
function: 3.1.3.2 regulation; type of regulation; posttranscriptional; covalent modification, demodification, maturation
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005224326.1
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO process: GO:0016310 - phosphorylation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogen regulation protein NR(II)
translation: MATGTLPDAGQILNSLINSILLLDKDLAIHYSNPAAQQLLAQSSRKLSGTPLPELLGYFSLNLDLMRESLDSGQGFTDNEVTLVVDGRAHIMSLTAQRIQHDFILLEMAPMDNQRRLSQEQLQHAQQQAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPALMEYTKVIIEQADRLRNLVDRLLGPQQPGLHVTQSIHQVAERVFQLVSMEKADNVTLVRDYDPSLPELMHDPDQIEQVLLNITRNAMQALGEEGGTITIRTRTAFQLTLHGVRYRLVARIDIEDDGPGVPAHLQDTLFYPMVSGREGGTGLGLSIARNLIDQHSGKIEFNSWPGHTEFSVYLPIRQ
SIO_010081: DDA3937_RS00130
subclass of: SO_0000673
so part of: DDA3937_RS00130
location: complement(29811..30860)
location: region:29811-30860:-1
so has part: feature:29811-30860:-1:exon

WP_013315734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29811-30860:-1:exon

DDA3937_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: glnA
locus tag: DDA3937_RS00135
old locus tag: Dda3937_01118
so part of: sequence
location: complement(31065..32474)
location: region:31065-32474:-1
so has part: feature:31065-32474:-1:exon
subclass of: SO_0000010

9731414
type: Gene
SIO_000068: ncbigene

position:31065:-1
position: 31065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32474:-1
position: 32474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31065-32474:-1:exon

DDA3937_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: glnA
locus tag: DDA3937_RS00135
old locus tag: Dda3937_01118
EC number: 6.3.1.2
function: 1.5.1.2 metabolism; building block biosynthesis; amino acids; glutamine
function: 1.8.3 metabolism; metabolism of other compounds; nitrogen metabolism
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462887.1
GO function: GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO process: GO:0006542 - glutamine biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate--ammonia ligase
translation: MSVEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNADFFEDGKMFDGSSIGGWKGINESDMVLMPDATTAVLDPFFEESTLIIRCDILEPGTMQGYDRDPRSIAKRAEDFLRSSGIADTVLFGPEPEFFLFDDVRFGSSISGSHVAIDDIEGAWNSSTKYEDGNKGHRPAVKGGYFPVPPVDSAQDLRSAMCLTMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHAFGKTATFMPKPMFGDNGSGMHCHMSLAKDGTNLFSGDKYGGLSETALYYIGGVIKHAKAINALSNPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVSSPKARRIEVRFPDPAANPYLCFAALLMAGLDGIINKIHPGDAMDKNLYDLPPEEAKEIPTVAGSLEEALNALNADREFLTRGGVFTDDAIDAYIELRIAENDRVRMTPHPVEFELYYSV
SIO_010081: DDA3937_RS00135
subclass of: SO_0000673
so part of: DDA3937_RS00135
location: complement(31065..32474)
location: region:31065-32474:-1
so has part: feature:31065-32474:-1:exon

WP_013315735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31065-32474:-1:exon

DDA3937_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: typA
locus tag: DDA3937_RS00140
old locus tag: Dda3937_01119
so part of: sequence
location: 32852..34675
location: region:32852-34675:1
so has part: feature:32852-34675:1:exon
subclass of: SO_0000010

9731415
type: Gene
SIO_000068: ncbigene

position:32852:1
position: 32852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34675:1
position: 34675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32852-34675:1:exon

DDA3937_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: typA
locus tag: DDA3937_RS00140
old locus tag: Dda3937_01119
function: 5.10 cell processes; defense/survivial
function: 5.3 cell processes; motility (incl. chemotaxis, energytaxis, aerotaxis, redoxtaxis)
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312820.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome-dependent GTPase TypA
translation: MIENLRNIAIIAHVDHGKTTLVDKLLQQSGTLGERNEATERVMDSNDLEKERGITILAKNTAINWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALNGIAGLDHNDMAEDMTPLFEAIVKHVEAPNVDLNGPFQMQISQLDYNNYVGVIGIGRIKRGVVKPNQQVSIIDSEGKVRNGKVSQVLGHLGLQRIESTLAEAGDIIAITGLGELNISDTICETSCVEALPALSVDEPTVTMYFCVNTSPFCGKEGKYVTSRQILDRLRKELVHNVALRVEETEDPDAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFRTIDGRRQEPFEQVTVDIEEQHQGSVMEALGLRKGEMRDMIPDGKGRVRLDYVIPSRGLIGFRTDFMTMTSGTGLLYSTFSHYDDIRPGEIGQRQNGVLISNGQGKAVAYALFSLQDRGKLFLGHGAEVYEGQIIGIHTRSNDLTVNCLTGKKLTNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPTSIRLRKRHLTENDRRRANRSAKDE
SIO_010081: DDA3937_RS00140
subclass of: SO_0000673
so part of: DDA3937_RS00140
location: 32852..34675
location: region:32852-34675:1
so has part: feature:32852-34675:1:exon

WP_013315736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32852-34675:1:exon

DDA3937_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: yihX
locus tag: DDA3937_RS00145
old locus tag: Dda3937_01120
so part of: sequence
location: 34898..35509
location: region:34898-35509:1
so has part: feature:34898-35509:1:exon
subclass of: SO_0000010

9731416
type: Gene
SIO_000068: ncbigene

position:34898:1
position: 34898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35509:1
position: 35509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34898-35509:1:exon

DDA3937_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: yihX
locus tag: DDA3937_RS00145
old locus tag: Dda3937_01120
EC number: 3.1.3.10
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315737.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-1-phosphatase
translation: MLYIFDLGNVVIDIDFNRVVGVWSSLSGAPLAALRERFVLGNTFEQHERGEISDEEFASRLCHELGITLSFEQFSTGWQAIFIGVRKDVIDIMHRLRQEGHRVVILSNTNRLHCQFWPGEYPEVQQAVDRLYLSQDIGQRKPEAAIYHHVLREEGVDASEALFFDDNAANVDAANALGIRSILVSDRQVVPDFFASQVFKQES
SIO_010081: DDA3937_RS00145
subclass of: SO_0000673
so part of: DDA3937_RS00145
location: 34898..35509
location: region:34898-35509:1
so has part: feature:34898-35509:1:exon

WP_013315737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34898-35509:1:exon

DDA3937_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: dtd
locus tag: DDA3937_RS00150
old locus tag: Dda3937_01121
so part of: sequence
location: 35517..35954
location: region:35517-35954:1
so has part: feature:35517-35954:1:exon
subclass of: SO_0000010

9731417
type: Gene
SIO_000068: ncbigene

position:35517:1
position: 35517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35954:1
position: 35954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35517-35954:1:exon

DDA3937_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: dtd
locus tag: DDA3937_RS00150
old locus tag: Dda3937_01121
EC number: 3.1.1.96
function: 2.2.3 information transfer; RNA related; RNA modification
function: 5.6.2 cell processes; protection; detoxification (xenobiotic metabolism)
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012147545.1
GO function: GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-aminoacyl-tRNA deacylase
translation: MIALIQRVSGASVAVDGAIVGEIDHGLLVLLGVEQDDDEQKAARLCEKVIGYRIFSDDNGKMNLNVQQAGGSLLVVSQFTLAADTQKGMRPSFSRGAAPAEADRLYQYFVGQCRERGLTTETGRFAADMKVSLVNDGPVTFWLQV
SIO_010081: DDA3937_RS00150
subclass of: SO_0000673
so part of: DDA3937_RS00150
location: 35517..35954
location: region:35517-35954:1
so has part: feature:35517-35954:1:exon

WP_013315738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35517-35954:1:exon

DDA3937_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
alternative label: yiiD
gene: fabY
locus tag: DDA3937_RS00155
old locus tag: Dda3937_01122
gene synonym: yiiD
so part of: sequence
location: 35988..36929
location: region:35988-36929:1
so has part: feature:35988-36929:1:exon
subclass of: SO_0000010

9731418
type: Gene
SIO_000068: ncbigene

position:35988:1
position: 35988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36929:1
position: 36929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35988-36929:1:exon

DDA3937_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
alternative label: yiiD
gene: fabY
locus tag: DDA3937_RS00155
old locus tag: Dda3937_01122
gene synonym: yiiD
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848441.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fatty acid biosynthesis protein FabY
translation: MYYLRVPESAEELDAYYQFRWEMLRKPLHQPLGSERDAYDALAHHQTIVDGHGKLVAVGRLSINADNEASIRFLAVHPDVQRKGLGTLMAMALESVARQEGVKRVVCSAREDAMAFFSRLGFVNQGEITTPMTTPVRHFLMIKPVATLDDILHRPDWCGQLQQAWYNHIPLSEKMGVRISQYTGQKFITTMPETGNQNPHHTLFAGSMFSLATLTGWGLIWLLLRERQLGGTIILADAHIRYSTPVTGRPSAVADLGSLSGDLDRLARGRKARVQLQVELFGNDKKGAVFEGIYIVLPPDPNELLEQGGSAIR
SIO_010081: DDA3937_RS00155
subclass of: SO_0000673
so part of: DDA3937_RS00155
location: 35988..36929
location: region:35988-36929:1
so has part: feature:35988-36929:1:exon

WP_013315739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35988-36929:1:exon

DDA3937_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00160
old locus tag: Dda3937_01123
so part of: sequence
location: complement(36993..38735)
location: region:36993-38735:-1
so has part: feature:36993-38735:-1:exon
subclass of: SO_0000010

9731419
type: Gene
SIO_000068: ncbigene

position:36993:-1
position: 36993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38735:-1
position: 38735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36993-38735:-1:exon

DDA3937_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00160
old locus tag: Dda3937_01123
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942714.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AsmA family protein
translation: MKLIGKLLLTLLLLALLAVVVLYVLAQTEWGARHISQWVNQRTEYQVSFRKMAHDWSSPGRIQLLDVSFGHKDQPVTLVAQSVSMGFSVRQITEPRHFSSLMLEGGTLNLGQTGFTLPIEADVLQLKAMALHAQDGDWRLRGEQVTGGITPWQPEPGYLLGKKAAFQLSAHSLLLNDLPASKVLVQGQFNNQQLTLDNFGADVARGELTGNASRAEDGSWLVNNLRLSNVRLQTRQSMADFWQPVTRLPAVTVNRFDLIDARIEGQNWAFTDLDVTLQNVTFRQNDWQSDDGSLSFNATDIVNGNMHLVDPIVSLDLSKQGVNIKQFSTRWEGGLLRTSGNWQRSNQRLTLDELVVAGMEYTLPADWRQRWQQTLPDWLAEVELRKFTANHNLLIDINPAFPFQLTALDGVGSNLLLARNHQWGVWQGALTLNASDATFNKVDVRRPSLALNANDNQITLTDLSAFTQSGLLEAKAVIAQQPARAFTLDLTGKAVAFDVLTRWGWPVPATAPTGNTNLQLHLNGRLEAASPLRPTLNGTLQGIDSAGHAISQAMHQGTTADSAPATSTPPPAPAAPAAQP
SIO_010081: DDA3937_RS00160
subclass of: SO_0000673
so part of: DDA3937_RS00160
location: complement(36993..38735)
location: region:36993-38735:-1
so has part: feature:36993-38735:-1:exon

WP_013315740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36993-38735:-1:exon

DDA3937_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00165
old locus tag: Dda3937_01124
so part of: sequence
location: complement(38891..40279)
location: region:38891-40279:-1
so has part: feature:38891-40279:-1:exon
subclass of: SO_0000010

9731420
type: Gene
SIO_000068: ncbigene

position:38891:-1
position: 38891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40279:-1
position: 40279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38891-40279:-1:exon

DDA3937_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00165
old locus tag: Dda3937_01124
function: 4.2.A.40 transport; Electrochemical potential driven transporters; Porters (Uni-, Sym- and Antiporters); The Nucleobase:Cation Symporter-2 (NCS2) Family
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 4.S.162 transport; substrate; purine/xanthine
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942715.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-xanthine permease family protein
translation: MSLSTTELPQADAATPANSELIYRLEDRPPLPQTLFAACQHLLAMFVAVITPALLICQALGLPAQDTQHIISMSLFASGLASILQIKTWGPVGSGLLSIQGTSFNFVTPLIMGGMALKNGGADVPTMMAALFGTLMVASCTEILLSRVLHLARRIITPLVSGIVVMIIGLSLIQVGLTSIGGGFAAMSNHTFGAPKNLLLAAIVLAVIIILNRQRNPYLRVASLVIAMAVGYLAAWLMGMLPESAGTSSHALINVPTPLYYGLGFDWNLLIPLMLVFMVTSLETIGDITATSDVSEQPVSGPLYMKRLKGGVLANGLNSCLSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATIVMFGTIAASGVRIVSREPLNRRAIMIIALSLAVGLGVSQQPLILQFAPEWLKTLLSSGIAAGGITAIVLNLVFPQEKE
SIO_010081: DDA3937_RS00165
subclass of: SO_0000673
so part of: DDA3937_RS00165
location: complement(38891..40279)
location: region:38891-40279:-1
so has part: feature:38891-40279:-1:exon

WP_013315741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38891-40279:-1:exon

DDA3937_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: recG
locus tag: DDA3937_RS00170
old locus tag: Dda3937_01125
so part of: sequence
location: complement(40461..42542)
location: region:40461-42542:-1
so has part: feature:40461-42542:-1:exon
subclass of: SO_0000010

9731421
type: Gene
SIO_000068: ncbigene

position:40461:-1
position: 40461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42542:-1
position: 42542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40461-42542:-1:exon

DDA3937_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: recG
locus tag: DDA3937_RS00170
old locus tag: Dda3937_01125
EC number: 3.6.4.12
function: 2.1.3 information transfer; DNA related; DNA recombination
function: 2.1.1 information transfer; DNA related; DNA replication
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010298170.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent DNA helicase RecG
translation: MDSRLLHTQPLSTLAGVGASQAEKLARLGLETVQDLLLHLPLRYEDRTHLYLINDVLPGMYATVEGDVLRSDITFGRRRMLTCQISDGSGMLTLRFFNFNAAMKNSLSPGQRVLAYGEVRRGKLGGEMIHPEYRVQGESATVELQETLTPVYPTTEGIRQATLRKLTDQALELLNTHPIDELLPQEMRHGLISLPDALRTLHRPPPDVQLAELEQGKHPAQQRLVMEELLAHHLSMLAVRAGAQRHRALALGPKDNLKQQLLAALPFSPTGAQQRVVAEIEQDMNKPFPMMRLVQGDVGSGKTLVAALAALQAIAHGKQVALMAPTELLAEQHAANFRRWFEPLGVEVGWLAGKQKGKARQAQQEAIASGQVSMVVGTHAIFQQQVQFNGLALVIIDEQHRFGVHQRLALWEKGEEQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRDDIIQRVRNACLQEGRQAYWVCTLIEESELLEAQAAEATCQELKAALPDLTIGLVHGRMKAQEKQAVMAAFKTNQLHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQMRLQVLRDSNDGFVIAQRDLEIRGPGELLGTRQTGNAAFRVADLLRDQALIPQVQRVSRHLHEHYPEHARALIDRWLPERTRYTNA
SIO_010081: DDA3937_RS00170
subclass of: SO_0000673
so part of: DDA3937_RS00170
location: complement(40461..42542)
location: region:40461-42542:-1
so has part: feature:40461-42542:-1:exon

WP_013315742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40461-42542:-1:exon

DDA3937_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: trmH
locus tag: DDA3937_RS00175
old locus tag: Dda3937_01126
so part of: sequence
location: complement(42542..43234)
location: region:42542-43234:-1
so has part: feature:42542-43234:-1:exon
subclass of: SO_0000010

9731422
type: Gene
SIO_000068: ncbigene

position:43234:-1
position: 43234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42542-43234:-1:exon

DDA3937_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: trmH
locus tag: DDA3937_RS00175
old locus tag: Dda3937_01126
function: 2.2.3 information transfer; RNA related; RNA modification
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855596.1
GO function: GO:0008173 - RNA methyltransferase activity [Evidence IEA]; GO:0009020 - tRNA (guanosine-2'-O-)-methyltransferase activity [Evidence IEA]
GO process: GO:0030488 - tRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (guanosine(18)-2'-O)-methyltransferase TrmH
translation: MTPERYTRIREMLNNRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPTNRMRTLVSTAAGSNSWVQVETHRTVQDAVGHLKTQGMQILATNLSASAVDFREVDYTRPTCILLGQEKTGITADALALADQDIIIPMVGMVQSLNVSVASALILYEAQRQRQLAGMYQRECSPLDEEEQQRLLFEGGYPVLARVARRKGLPRPFIDHTGQVIADAPWWAAMQSTEQ
SIO_010081: DDA3937_RS00175
subclass of: SO_0000673
so part of: DDA3937_RS00175
location: complement(42542..43234)
location: region:42542-43234:-1
so has part: feature:42542-43234:-1:exon

WP_013315743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42542-43234:-1:exon

DDA3937_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: spoT
locus tag: DDA3937_RS00180
old locus tag: Dda3937_01127
so part of: sequence
location: complement(43241..45343)
location: region:43241-45343:-1
so has part: feature:43241-45343:-1:exon
subclass of: SO_0000010

9731423
type: Gene
SIO_000068: ncbigene

position:43241:-1
position: 43241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45343:-1
position: 45343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43241-45343:-1:exon

DDA3937_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: spoT
locus tag: DDA3937_RS00180
old locus tag: Dda3937_01127
EC number: 2.7.6.5
EC number: 3.1.7.2
function: 1.7.33 metabolism; central intermediary metabolism; nucleotide and nucleoside conversions
function: 3.1.3.4 regulation; type of regulation; posttranscriptional; proteases, cleavage of compounds
function: 5.5.3 cell processes; adaptation to stress; starvation response
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016603963.1
GO function: GO:0008728 - GTP diphosphokinase activity [Evidence IEA]; GO:0008893 - guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity [Evidence IEA]
GO process: GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
translation: MYLFESLNLLIQRYLPEDQIKRLKQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMRLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHLKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLKEAGISCRVSGREKHLYSIYCKMHLKEQRFHSIMDIYAFRVIVREVDTCYRVLGQVHSLYKPRPGRVKDYIAIPKANGYQSLHTSLIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEGESSSTTAQVRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQALSSGQTIEIITAPGARPNAAWLNFVVSSKARAKIRQMLKNLKRDDSVSLGRRLINHALGSGRKLSDIPEQNIQRELERMKLASLDDLLAEIGLGNAMSVVVARNLLEEHAETGAAGIRKLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDEVTEQEFMTEIKVDMFNHQGALANLTAAISSSNSNIQSINTEERDGRVYSAFIRLTTRDRIHLANIMRKIRVMPDVIKVNRNRN
SIO_010081: DDA3937_RS00180
subclass of: SO_0000673
so part of: DDA3937_RS00180
location: complement(43241..45343)
location: region:43241-45343:-1
so has part: feature:43241-45343:-1:exon

WP_013315744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43241-45343:-1:exon

DDA3937_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rpoZ
locus tag: DDA3937_RS00185
old locus tag: Dda3937_01128
so part of: sequence
location: complement(45368..45643)
location: region:45368-45643:-1
so has part: feature:45368-45643:-1:exon
subclass of: SO_0000010

9731424
type: Gene
SIO_000068: ncbigene

position:45368:-1
position: 45368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45643:-1
position: 45643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45368-45643:-1:exon

DDA3937_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rpoZ
locus tag: DDA3937_RS00185
old locus tag: Dda3937_01128
EC number: 2.7.7.6
function: 2.2.2 information transfer; RNA related; transcription related
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit omega
translation: MARVTVQDAVEKIGNRFDLVLVAARRARQIQVGGKEPLVPEENDKYTVIALREIEEGLINGQILDTRERQEQQEQEAAEIQAVTAIAEGRR
SIO_010081: DDA3937_RS00185
subclass of: SO_0000673
so part of: DDA3937_RS00185
location: complement(45368..45643)
location: region:45368-45643:-1
so has part: feature:45368-45643:-1:exon

WP_013315745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45368-45643:-1:exon

DDA3937_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: gmk
locus tag: DDA3937_RS00190
old locus tag: Dda3937_01129
so part of: sequence
location: complement(45698..46321)
location: region:45698-46321:-1
so has part: feature:45698-46321:-1:exon
subclass of: SO_0000010

9731425
type: Gene
SIO_000068: ncbigene

position:45698:-1
position: 45698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46321:-1
position: 46321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45698-46321:-1:exon

DDA3937_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: gmk
locus tag: DDA3937_RS00190
old locus tag: Dda3937_01129
EC number: 2.7.4.8
function: 1.5.2.1 metabolism; building block biosynthesis; nucleotide; purine biosynthesis
function: 1.7.33 metabolism; central intermediary metabolism; nucleotide and nucleoside conversions
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1
GO function: GO:0004385 - guanylate kinase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: guanylate kinase
translation: MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSISHTTRAMRPGEVHGEHYFFVPVDEFKRMIEEDDFLEYAEVFGNYYGTSRAAIEQVLSTGVDVFLDIDWQGARQIRERMPQARSIFILPPSQEELERRLRGRGQDSEEVIARRMKQAVAEMSHYAEYDYLIVNDDFDLALLDLKTIIRAERLRLSRQKVRHDALITKLLAD
SIO_010081: DDA3937_RS00190
subclass of: SO_0000673
so part of: DDA3937_RS00190
location: complement(45698..46321)
location: region:45698-46321:-1
so has part: feature:45698-46321:-1:exon

WP_013315746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45698-46321:-1:exon

DDA3937_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ligB
locus tag: DDA3937_RS00195
old locus tag: Dda3937_01130
so part of: sequence
location: 46628..48310
location: region:46628-48310:1
so has part: feature:46628-48310:1:exon
subclass of: SO_0000010

9731426
type: Gene
SIO_000068: ncbigene

position:46628:1
position: 46628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48310:1
position: 48310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46628-48310:1:exon

DDA3937_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ligB
locus tag: DDA3937_RS00195
old locus tag: Dda3937_01130
EC number: 6.5.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942720.1
GO function: GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent DNA ligase LigB
translation: MRYRYALAAVLFAVSGLAEAASCPAWSSTRAEQEITQLGQQLTQWDNAYYEQGQSPVDDQVYDQLRQTLATWQVCFQADAGRFAISLPTTGRRQHPVAHTGLKKLSEPTELKQWIAQHNDLWVQPKIDGVAVTLVYEQGKLVAAISRGNGRQGEDWTDKVRQMNSVPQQLSAMSGRQVFQGELYLQVTDHRQQQVGGINARAQVAGEMRRKQPSPLLSRIGVFVWAWPDGPADMPARLAKLRELGFGLTADYTQPVSSLEAAAQWRERWYRAPLPFVTDGVVVRQAQEPAGRYWQDTPAEWAVAWKYPLVNRVTEVTGVDVEVGRTGRMTVVLQLQPVILDDKTVSRVNLGSVSRWRQWDVLPGDRVSISLAGLGIPRLDAVVWRGAVREAITVPATSPFDVFSCLQWSRECQPQFLARLVWMSGRNGLSLSGISEATWQRLTQRGALVDVVSWLALEPAQLAAAGDFGEQQAERIHRQFQLARRQPLRNWLLALGLPVPSRVRHALDGASLEQLQQRSAAEWQQFSGIGVRRAQRIRDFLHHTDIVRQLAWLNEHGVKS
SIO_010081: DDA3937_RS00195
subclass of: SO_0000673
so part of: DDA3937_RS00195
location: 46628..48310
location: region:46628-48310:1
so has part: feature:46628-48310:1:exon

WP_033111485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46628-48310:1:exon

DDA3937_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: eptB
locus tag: DDA3937_RS00200
old locus tag: Dda3937_01131
so part of: sequence
location: 48677..50359
location: region:48677-50359:1
so has part: feature:48677-50359:1:exon
subclass of: SO_0000010

9731427
type: Gene
SIO_000068: ncbigene

position:48677:1
position: 48677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50359:1
position: 50359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48677-50359:1:exon

DDA3937_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: eptB
locus tag: DDA3937_RS00200
old locus tag: Dda3937_01131
EC number: 2.7.8.42
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848433.1
GO function: GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: kdo(2)-lipid A phosphoethanolamine 7''-transferase
translation: MKSLLALSQSKLSWLLAIYIGFFLNLPVFYRRVDAFPFFTENPVAKYIPLLVESMACILFTFFLMRILSLGGRRFFRVMASLLVLISVAASYYMTFFNVVIGYGIIAAVMTTDIDLSKEVVGLFFVLWVAALSLPPVFLIWKNRLQQTLIEQLRTSGRRRIALLGLVASAALVWLPLRYLAQINTSAEKLSNQDLPSYGGVVAHSYLPANWLSAFGLFAYARYDENQDDDELIDPSKQFTYQAPPGIDDTYVVFIIGETTRWDHMGLLGYERDTTPQLAKEKNLLAFRGHSCDTSTKLSMRCMFVREGGTSDNPQRTLREKNIFAVMKSLGFSSELFAMQSEVWFYNNIQADNYAFREMIASEKRNEGKAVDDMLLVDEMSQSLMRYPNGKHLVVLHTKGSHYLYSMRYPRSYARYQPECMGVDASCSREQLINAFDNSVLYTDAVIKRVIDQLRDKKALLVYASDHGESIDDNYHLHGTPRQMAPPEQFRSPIMLWASDKYLAQPRNQQAFEQLRAQQQQGKVLRHEEIFDSMLGCLGYTSPDGGIQEKNNWCNMPGRG
SIO_010081: DDA3937_RS00200
subclass of: SO_0000673
so part of: DDA3937_RS00200
location: 48677..50359
location: region:48677-50359:1
so has part: feature:48677-50359:1:exon

WP_033111486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48677-50359:1:exon

DDA3937_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00205
old locus tag: Dda3937_04245
so part of: sequence
location: 50513..50589
location: region:50513-50589:1
so has part: feature:50513-50589:1:exon
subclass of: SO_0000663

9731428
type: Gene
SIO_000068: ncbigene

position:50513:1
position: 50513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50589:1
position: 50589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50513-50589:1:exon

DDA3937_RS00205
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 198628
locus tag: DDA3937_RS00205
old locus tag: Dda3937_04245
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:50547..50549,aa:Pro,seq:cgg)
SIO_010081: DDA3937_RS00205
subclass of: SO_0000673
so part of: DDA3937_RS00205
location: 50513..50589
location: region:50513-50589:1
so has part: feature:50513-50589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50513-50589:1:exon

DDA3937_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00210
old locus tag: Dda3937_01132
so part of: sequence
location: complement(51020..51646)
location: region:51020-51646:-1
so has part: feature:51020-51646:-1:exon
subclass of: SO_0000010

9731429
type: Gene
SIO_000068: ncbigene

position:51020:-1
position: 51020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51646:-1
position: 51646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51020-51646:-1:exon

DDA3937_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00210
old locus tag: Dda3937_01132
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019846525.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MILRTAMLLLGGLLTVNMGHASDTSMDIHRQWSVCQYKTLASRKEECFAALSQLAQEQTESHPDRADYLIWSAMVDSSWAGVKDGMEALNLAGQAKSTLEKAIALDPHALNGAAYTILGVLYYQVPGWPLGFGDEKKAEQYLKMALKINPASIDANFFYGDFLLKAGRKNEARQYLTAAQNAAPRPGREIADLGRRAEAEKALVQLKY
SIO_010081: DDA3937_RS00210
subclass of: SO_0000673
so part of: DDA3937_RS00210
location: complement(51020..51646)
location: region:51020-51646:-1
so has part: feature:51020-51646:-1:exon

WP_033111487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51020-51646:-1:exon

DDA3937_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00215
old locus tag: Dda3937_01133
so part of: sequence
location: complement(51748..52542)
location: region:51748-52542:-1
so has part: feature:51748-52542:-1:exon
subclass of: SO_0000010

9731430
type: Gene
SIO_000068: ncbigene

position:51748:-1
position: 51748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52542:-1
position: 52542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51748-52542:-1:exon

DDA3937_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00215
old locus tag: Dda3937_01133
function: 1.7 metabolism; central intermediary metabolism
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886704.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MKLKNKRILLTGASSNTGQELALSLAARGARLYLVGRNEKALLALQQRLPDAGHHNILLADLCDEQDRDALAECFPENVRLDVLINNIDTSTFGLFEEQSHDVIRRQLTLNTEVPILLTHSLLDCINKPGIIMNIGSTLDGIGYPGYSAYCASKFALRGFSEALHRELSSKGIKVLHLAPRAIDAGRNAPKTHALTQALGYHSDKPAWVADQVVNALERETVRRWLGWPEKLFVRLNALVPAVVDNAIRRQLAAIQHYARAQKK
SIO_010081: DDA3937_RS00215
subclass of: SO_0000673
so part of: DDA3937_RS00215
location: complement(51748..52542)
location: region:51748-52542:-1
so has part: feature:51748-52542:-1:exon

WP_013315750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51748-52542:-1:exon

DDA3937_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00220
old locus tag: Dda3937_01134
so part of: sequence
location: complement(52547..53185)
location: region:52547-53185:-1
so has part: feature:52547-53185:-1:exon
subclass of: SO_0000010

9731431
type: Gene
SIO_000068: ncbigene

position:52547:-1
position: 52547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53185:-1
position: 53185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52547-53185:-1:exon

DDA3937_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00220
old locus tag: Dda3937_01134
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886703.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: long-chain-fatty-acid--CoA ligase
translation: MSFYQQLQSATSTSQQLMMSAPVIDACRQGTITGDMYIAFLTQAYHHVSYTVPLLMAASGRLPRHQAWVREAIEEYINAEYDHKASILHKIRACGGKTETLGQNAAAQWIELMAAYLYDQIQRDNPMSIFGLIHVLEGIQANIAPDMIRQIDAEQDLPVNAINGLQEQDPCPNVFAALMDNINDSADQTAIIHAAHVVYQLYGDMLRSLTEH
SIO_010081: DDA3937_RS00220
subclass of: SO_0000673
so part of: DDA3937_RS00220
location: complement(52547..53185)
location: region:52547-53185:-1
so has part: feature:52547-53185:-1:exon

WP_013315751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52547-53185:-1:exon

DDA3937_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00225
old locus tag: Dda3937_01135
so part of: sequence
location: 53451..54629
location: region:53451-54629:1
so has part: feature:53451-54629:1:exon
subclass of: SO_0000010

9731432
type: Gene
SIO_000068: ncbigene

position:53451:1
position: 53451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54629:1
position: 54629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53451-54629:1:exon

DDA3937_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00225
old locus tag: Dda3937_01135
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848429.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MSTSRRAHQLAILVVMISASLVGLVQGYSIPLVTLKLTALGYGSALTGMMSALPAIGVFVSSWVAAPVAMRLPVGRLLALSTWGMGVSLTLSFYLDNVALLAAPRFLMGFCCGLIIVIGESWVSGHTAEHRRGVLVGLYATAFTGLQLLGPLLISLTGLDDPTGLLLILALHGVCLLMVPGSSFSGLALSAHRQHNLFSLLLAAPALAAAVFAFAFFDGAVLSMLPLYGMAHGYEEQLAVLLVTVLFIGDALLQVPLGWVSDKLGTVRVHLACGGLFVLMLVGLPFSYGTGWVWANVFLLGAVAGSIYTLALVRAGKQFSGVNLVAINALFGVLWGVGSFSGPLVSGSLMQWYGRDGLIAVLGVLGLLFLAANALSATQRNAAGQTDPELAE
SIO_010081: DDA3937_RS00225
subclass of: SO_0000673
so part of: DDA3937_RS00225
location: 53451..54629
location: region:53451-54629:1
so has part: feature:53451-54629:1:exon

WP_013315752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53451-54629:1:exon

DDA3937_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00230
old locus tag: Dda3937_01136
so part of: sequence
location: 54672..55562
location: region:54672-55562:1
so has part: feature:54672-55562:1:exon
subclass of: SO_0000010

9731433
type: Gene
SIO_000068: ncbigene

position:54672:1
position: 54672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55562:1
position: 55562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54672-55562:1:exon

DDA3937_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00230
old locus tag: Dda3937_01136
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2 regulation; type of regulation; transcriptional level
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019846521.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MDRLATLETFICVYESGSFSAASRRLGIGQPAISKAIMQLEQQLAVKLLLRSTRGLTPTEAGQRFYEQVAPALQQLHEAQDGVRGGNGELSGYLRVSAPVTFARLHVLPRLHVFMSQHPQLKVDIILDDRPVDLIAEGIDVALRLGEMKDSGLTARKIGSAPMRLLATPAYFAARGTPASPEALEDHDAVIYLQTDAPGNWLFCRDDRQCRVTMSGRIRTSAAEGVREAVLAGNGLTVASAWMFAPELASGAVTTALADWHIGVMDLWAVYPGGRLTSARARAFTEFVAQHLSVPA
SIO_010081: DDA3937_RS00230
subclass of: SO_0000673
so part of: DDA3937_RS00230
location: 54672..55562
location: region:54672-55562:1
so has part: feature:54672-55562:1:exon

WP_013315753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54672-55562:1:exon

DDA3937_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00235
old locus tag: Dda3937_01137
so part of: sequence
location: 55731..56900
location: region:55731-56900:1
so has part: feature:55731-56900:1:exon
subclass of: SO_0000010

9731434
type: Gene
SIO_000068: ncbigene

position:55731:1
position: 55731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56900:1
position: 56900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55731-56900:1:exon

DDA3937_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00235
old locus tag: Dda3937_01137
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848427.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MSTLSYSDDTVRTGKPLIFAMAAASGVAVANIYYNQPMLGLMTASFPGSGATSMIPTATQLGYALGLLMLVPLGDKFERRRLIVWQFLLLALASVLAALAPSAPVLLVASVLIGVGATVAQQIVPVAATVASEGQRGAVVGTVMSGLLSGILLSRTLAGLVADAAGWRAMFWLSVPLALAGAALMGRMLPVLPPSSALSWRSLMRSLLTLWRAEPALRRATWIQGALFASFSAFWSILALYLASGSHPLGAAAAGLFGVIGVAGITAAPVAGRLADRIGSRPVILLGALLTLLAWGVFGLWGAVAGLIVGVILLDLGVQSALIAHQHVIYGLQPTARGRINTLFMGGMFLGGALGSSGAMAAWQAGGWMPVTLFAGGVTLLALVAASRR
SIO_010081: DDA3937_RS00235
subclass of: SO_0000673
so part of: DDA3937_RS00235
location: 55731..56900
location: region:55731-56900:1
so has part: feature:55731-56900:1:exon

WP_033112175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55731-56900:1:exon

DDA3937_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00240
old locus tag: Dda3937_01138
so part of: sequence
location: complement(57019..58296)
location: region:57019-58296:-1
so has part: feature:57019-58296:-1:exon
subclass of: SO_0000010

9731435
type: Gene
SIO_000068: ncbigene

position:57019:-1
position: 57019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58296:-1
position: 58296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57019-58296:-1:exon

DDA3937_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00240
old locus tag: Dda3937_01138
function: 1.7.9 metabolism; central intermediary metabolism; glucose metabolism
function: 7.2 location of gene products; periplasmic space
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848426.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine-type phosphatase
translation: MLFTRKTVAGLLLSALPWLGAQAETAPSGWALEKVVEISRHGVRPPTEGNVKTIQEGTGRDWPTWLTHYGELTGHGYAAAVLKGQYEGQYLRQHGLLTHNCPAPDDVFVWASPLQRTQETAMALMDGVFPGCGVVIRGPESEDNDPLFHAETAGVLVDQEQVKVDLQKAMQGKSAEQIQAEWQPAIDRLKQAVCLPDKPCPAFSAKWELKESKKGNTSLHGPEALANMAETIRLAYSNNNPLGQVAFGNARTATAVGSLMSLLTANYDFTNDLPYVARRGGSVLMNQIALALNPEHQADAPPDAKWLLYVAHDTNIAKLRAMLGFTWQMGDYPRGNIPPAGSLIFERWRNPQGQRFVRIYFQAQSLDQIRGLTALDNDHPPLRSEFSMGGCQKTDVGTLCPYDAVMKRLNGSVDRTALLPVRYTL
SIO_010081: DDA3937_RS00240
subclass of: SO_0000673
so part of: DDA3937_RS00240
location: complement(57019..58296)
location: region:57019-58296:-1
so has part: feature:57019-58296:-1:exon

WP_013315755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57019-58296:-1:exon

DDA3937_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00245
old locus tag: Dda3937_01139
so part of: sequence
location: 58596..59504
location: region:58596-59504:1
so has part: feature:58596-59504:1:exon
subclass of: SO_0000010

9731436
type: Gene
SIO_000068: ncbigene

position:58596:1
position: 58596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59504:1
position: 59504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58596-59504:1:exon

DDA3937_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00245
old locus tag: Dda3937_01139
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848425.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter permease
translation: MKANKIPTLFNRGGFGGSGFIGFGFIAPLLIPLLLFWVIPFFCSLYISLTDWDYISPDYHLVGVDNYRDLLLSDDFTGALVNTLTFAIAVVIPVVVLGLGFALLLHRQCRGQRCYQAMIFSPWITPTVAVSVVWSWVFDSRAGLANQLLGLFGVAGVPWLERPGSAMLAVVIVTVWQGIGWTMMFFISALNRIPAELYEAARLDGGSRARRLLTITLPLISPTTFFLLIVNLVNAVQAFDQFQMLTQGGPGNSTRTLMYLFYQQAFQQFSMGPAAATAVMILLLAGSLSLVNTLIARRWVYF
SIO_010081: DDA3937_RS00245
subclass of: SO_0000673
so part of: DDA3937_RS00245
location: 58596..59504
location: region:58596-59504:1
so has part: feature:58596-59504:1:exon

WP_077245746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58596-59504:1:exon

DDA3937_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00250
old locus tag: Dda3937_01140
so part of: sequence
location: 59516..60403
location: region:59516-60403:1
so has part: feature:59516-60403:1:exon
subclass of: SO_0000010

9731437
type: Gene
SIO_000068: ncbigene

position:59516:1
position: 59516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60403:1
position: 60403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59516-60403:1:exon

DDA3937_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00250
old locus tag: Dda3937_01140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848424.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate ABC transporter permease
translation: MVSSPITLAEPGVSTAARRPAFRRRGMLKHLLLMMAGLLMVFPFVWMLSGALKTNDEIFRHPLQLLPSHPDFSSFAAVWRETHFGLFMYNSLTVALLTSLLVVINSVLFAYAIVQWRGKASRLLYGVVMACYMLPGAVTYIPCYIILAKLHLLDTHIGLIFSNAVSAMGVFYLHQALKKIHPSLLEAARIDGAGEWSLLRTIVLPQIKPVLATLFLLIFITNYNSYMWPSLVITSPSLNLISIGIRQYFISGGDYGFNWSNIMAASAIVVMPMLFLFLLCQRIILSGFSDNGVKE
SIO_010081: DDA3937_RS00250
subclass of: SO_0000673
so part of: DDA3937_RS00250
location: 59516..60403
location: region:59516-60403:1
so has part: feature:59516-60403:1:exon

WP_148226850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59516-60403:1:exon

DDA3937_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00255
old locus tag: Dda3937_01141
so part of: sequence
location: 60403..61683
location: region:60403-61683:1
so has part: feature:60403-61683:1:exon
subclass of: SO_0000010

9731438
type: Gene
SIO_000068: ncbigene

position:61683:1
position: 61683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60403-61683:1:exon

DDA3937_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00255
old locus tag: Dda3937_01141
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315758.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extracellular solute-binding protein
translation: MMTVCKGLRFVGGALCALLLTVQAQAATEVNFWYSGGTKPQKMMLTLIDEFNRSQDQYVVKGALQGNYDETWQKMQAGMAAQNAPAFALLTASQGTALAERKLLRDLRPYMDDSFHFTDFIGAFRRQVTRPDGSVYGLPAYGTTQVLYYNKAVLAQHGFTPDDLKTWQGLAKVATAVTQKDAGGDTRYYGWEPMWGPGNLIDAALSNGGRILSEDGKKVLIDSPAWVEVWDSFRRWIHDERIMRIYHGGQGWEYWYKTIDDVMKDRALGYTGSSGDQGDLDFQRLAALPQPGWGNHPAAPQAGALIFVMPTGTPDAAAKGAFAFMRFYTSAVNTARWSMFTGYIPVRESVLQDADYQKYVAANPQAAVPVQQAKSASMDFIDPTKGKILDALTVAADQVEIENKPAQQALTEAARKAQKALDRINE
SIO_010081: DDA3937_RS00255
subclass of: SO_0000673
so part of: DDA3937_RS00255
location: 60403..61683
location: region:60403-61683:1
so has part: feature:60403-61683:1:exon

WP_013315758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60403-61683:1:exon

DDA3937_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00260
old locus tag: Dda3937_01142
so part of: sequence
location: 61676..63106
location: region:61676-63106:1
so has part: feature:61676-63106:1:exon
subclass of: SO_0000010

9731439
type: Gene
SIO_000068: ncbigene

position:61676:1
position: 61676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63106:1
position: 63106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61676-63106:1:exon

DDA3937_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00260
old locus tag: Dda3937_01142
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848422.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CehA/McbA family metallohydrolase
translation: MNKPELTLAGCLTTGRGQVAFTVPEGIDCLTLTAHNHNKSYLYAFVYDARQQLRANLLIEPTAKSVTIAARRALPLGGIPGPLPPGAWRLVLCSIPAQASHPTQADYQITVAFDPPLPPPDEMLLTVALRGDHQVCFDYSACLEPASRWYRGDLHAHTRLSDGHNSLTAAVALAQAQQLDFMFLTEHNLCHPALPTGGRTLFLPALEVTTDIGHFNVHGPRRVLTLEDGDMAPETLIRQGLSLNVTGDGNISINHPMMPPWHWQYAAMPLARINTLEVCCDPSWPTSAAATERALQLLSTLWNGGWRIAAVGGSDCHLRPDERYDGTTQPSVYGDPTTLVFAHGLSGDAILHGLRQGRVYIDRQCGLRFRFDDGEVLPGQNVGARTVQATLAVEDDRPGYVAECVAGGTVISRHALGRDEVSVALPLASWPWCRIDIRGPDGGFAGLINPLYNGTHPIFSCQTFTTWGEAVARLPK
SIO_010081: DDA3937_RS00260
subclass of: SO_0000673
so part of: DDA3937_RS00260
location: 61676..63106
location: region:61676-63106:1
so has part: feature:61676-63106:1:exon

WP_013315759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61676-63106:1:exon

DDA3937_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00265
old locus tag: Dda3937_01143
so part of: sequence
location: 63252..64259
location: region:63252-64259:1
so has part: feature:63252-64259:1:exon
subclass of: SO_0000010

9731440
type: Gene
SIO_000068: ncbigene

position:63252:1
position: 63252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64259:1
position: 64259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63252-64259:1:exon

DDA3937_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00265
old locus tag: Dda3937_01143
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848421.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenic resistance protein
translation: MPTSLLSRWSGWLERRQTVIYLLTLLVAAVLAWRWTPPDALASAINPALALMLFVTFLQLPLSRLLAALTHLRFMLALVATNFVAIPLLVAVLLRLWPLEPLVAVGVAIILLCPCVDYVVTFSHQGGADSRLLLAATPVLLVLQMLLLPLWLPLLLPQTTAVDIGMAPFLHAFIVLMALPLLLAAVVQRWAARYAAGAAVTNWLGLLPVPATALVLALIIAFVVPRLGLATGAVRQALPVYLLFAVLAPALSWLMARLWSLPAPSGRALVFSGATRNALVILPLALAIPDALPVIPAVVVTQTLVELLAELVYIRWVPRLRFAGGQPHSSAPSGK
SIO_010081: DDA3937_RS00265
subclass of: SO_0000673
so part of: DDA3937_RS00265
location: 63252..64259
location: region:63252-64259:1
so has part: feature:63252-64259:1:exon

WP_042318710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63252-64259:1:exon

DDA3937_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00270
old locus tag: Dda3937_01144
so part of: sequence
location: 64272..65327
location: region:64272-65327:1
so has part: feature:64272-65327:1:exon
subclass of: SO_0000010

9731441
type: Gene
SIO_000068: ncbigene

position:64272:1
position: 64272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65327:1
position: 65327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64272-65327:1:exon

DDA3937_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00270
old locus tag: Dda3937_01144
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855581.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQAFKPLRGPERLIRMGQWAVALLFAYFLVMISAAVLEDLPSLTREPDRGSFIDQTAVDAQKARMAPIQAAQETLDNALADKREAREIATNDYAKAKASFDNWRATRSSTELSDQNPEVIKRNHELDRLLALQRQLDGQLADLQKQRAQLQLQLAPITLAVSRLYGDADARYGEALRKAELQAFFIRLAFVGPLLLAALWLFRRYRKGNQWPFVWGFILFALFGFFVELVPYLPSFGGYIRYGVGVVLTYFGGRALLRRLQAYLERKKQEQAASQEERKESIHYEAALTSLARNQCPSCDRPLILQNGATPAFCMHCGLQLLSPCPSCGLRKNAFYHYCPDCGEPAETSEN
SIO_010081: DDA3937_RS00270
subclass of: SO_0000673
so part of: DDA3937_RS00270
location: 64272..65327
location: region:64272-65327:1
so has part: feature:64272-65327:1:exon

WP_013315761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64272-65327:1:exon

DDA3937_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00275
old locus tag: Dda3937_01145
so part of: sequence
location: complement(65612..66100)
location: region:65612-66100:-1
so has part: feature:65612-66100:-1:exon
subclass of: SO_0000010

23677376
type: Gene
SIO_000068: ncbigene

position:65612:-1
position: 65612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66100:-1
position: 66100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65612-66100:-1:exon

DDA3937_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00275
old locus tag: Dda3937_01145
EC number: 2.3.1.-
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848420.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MSLVDFTPADYPRLIRWVDSAELNLLWGGPTYSFPLTATQITDHLANPQFVPYLFEHQGDIVGFVELSQVEPHHSRLCRVFIDPAYRGRGLARAMLQAAIRQAVERFEAQAVSLSVFIPKIIRVAGQNAWRFEQRNALALQGKTHNESCNAATQRISRSLHQ
SIO_010081: DDA3937_RS00275
subclass of: SO_0000673
so part of: DDA3937_RS00275
location: complement(65612..66100)
location: region:65612-66100:-1
so has part: feature:65612-66100:-1:exon

WP_013315762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65612-66100:-1:exon

DDA3937_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00280
old locus tag: Dda3937_01146
so part of: sequence
location: complement(66100..67473)
location: region:66100-67473:-1
so has part: feature:66100-67473:-1:exon
subclass of: SO_0000010

9731443
type: Gene
SIO_000068: ncbigene

position:67473:-1
position: 67473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66100-67473:-1:exon

DDA3937_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00280
old locus tag: Dda3937_01146
EC number: 4.3.1.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848419.1
GO function: GO:0008721 - D-serine ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0046416 - D-amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-serine ammonia-lyase
translation: MADAVYGKSLPQWFHDFPLLEPLVNRQPVCWFNPAAASVSDALGDVPLTGADVADASRRLQRFAPFLRQAFPELEASHGIIESELVPVPAFAAAIARQAGLDAPPSVLLKLDSHLPVAGSVKARGGIYEVLYHAEQLALRHGLLRESDDYRRLLDDDCQQWFRRHKVAVGSTGNLGMSIGIASARLGFDTTVHMSADARQWKKDRLRAHGVRVVEYDGDYGQAVAQGRREALSDPSCHFIDDENSTSLFLGYAVAGERLKAQFAAQGRVVNAEHPLFVYLPCGVGGAPGGISFGLKLAFGDHVHCIFAEPTESPCMLMGVYTGLHDQLAVQDFGISNRTTADGLAVGRPSGFVGKAMQRLIDGYYTLTDDDMLALLHVMHDTQQILLEPSALAGAPGFLRLLQENQGYRQRAPLTPQRCRQGTHVIWATGGGMVPEEEMMRYLQAGAASRLNGKETP
SIO_010081: DDA3937_RS00280
subclass of: SO_0000673
so part of: DDA3937_RS00280
location: complement(66100..67473)
location: region:66100-67473:-1
so has part: feature:66100-67473:-1:exon

WP_033111488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66100-67473:-1:exon

DDA3937_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00285
so part of: sequence
location: 67850..68131
location: region:67850-68131:1
so has part: feature:67850-68131:1:exon
subclass of: SO_0000010

23677377
type: Gene
SIO_000068: ncbigene

position:67850:1
position: 67850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68131:1
position: 68131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67850-68131:1:exon

DDA3937_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942729.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVNRLAAGGLLLMLPLCGLAIAPYPADGNREFTEAQRAEIRRIVTEYLLTHPDRVQAIGQTPAIDGCMPARPAAGNGKLNPCGNTLWVCPPQ
SIO_010081: DDA3937_RS00285
subclass of: SO_0000673
so part of: DDA3937_RS00285
location: 67850..68131
location: region:67850-68131:1
so has part: feature:67850-68131:1:exon

WP_033111489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67850-68131:1:exon

DDA3937_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00290
old locus tag: Dda3937_01148
so part of: sequence
location: 68310..68576
location: region:68310-68576:1
so has part: feature:68310-68576:1:exon
subclass of: SO_0000010

9731445
type: Gene
SIO_000068: ncbigene

position:68310:1
position: 68310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68576:1
position: 68576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68310-68576:1:exon

DDA3937_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00290
old locus tag: Dda3937_01148
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886688.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1471 domain-containing protein
translation: MKAIKNFVAVIALATVSFGTFAATTSTATEVQQSASLSVGTVSTTANTLDGLQASLSEKASAAGAKSFRIISATGNENQMRGVAELYN
SIO_010081: DDA3937_RS00290
subclass of: SO_0000673
so part of: DDA3937_RS00290
location: 68310..68576
location: region:68310-68576:1
so has part: feature:68310-68576:1:exon

WP_013315765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68310-68576:1:exon

DDA3937_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00295
old locus tag: Dda3937_01149
so part of: sequence
location: complement(69021..70124)
location: region:69021-70124:-1
so has part: feature:69021-70124:-1:exon
subclass of: SO_0000010

9731447
type: Gene
SIO_000068: ncbigene

position:69021:-1
position: 69021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70124:-1
position: 70124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69021-70124:-1:exon

DDA3937_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00295
old locus tag: Dda3937_01149
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886694.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ROK family transcriptional regulator
translation: MEKRELTATHRKLLGLLRRSGSLSRSALAAASGLTTAAVSMMTRDMLNLGLLEESDRAQGRRGPPQINLRPAAHAGYVLGVYAEYDLICLILMDYAGQCVAETTLHGDFRIVDSVADTLADAIRTLLDAQPQARDRLLAVSLALPARFDGGAMPVWIAPGLAAWRGVDIARQLGDRLGCPVLVENDANCAAIGELHFGSAAPDDSFFYLYIGKGIGGALILNGELHRGKQGNAGEIGALRTRAQPRPSFDDLHDCLLAAGEPLPFTTADADWQALAASPAGEGWVQRAAGELYGLLYSVTALLDPSCLYLGGTLPAPFMAGLQAAVMTQTPAPDDDAPLTLPPVRLSTLPTQNSAAFGAAALALNQY
SIO_010081: DDA3937_RS00295
subclass of: SO_0000673
so part of: DDA3937_RS00295
location: complement(69021..70124)
location: region:69021-70124:-1
so has part: feature:69021-70124:-1:exon

WP_033111490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69021-70124:-1:exon

DDA3937_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00300
old locus tag: Dda3937_01150
so part of: sequence
location: 70216..71595
location: region:70216-71595:1
so has part: feature:70216-71595:1:exon
subclass of: SO_0000010

9731448
type: Gene
SIO_000068: ncbigene

position:70216:1
position: 70216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71595:1
position: 71595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70216-71595:1:exon

DDA3937_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00300
old locus tag: Dda3937_01150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012764964.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extracellular solute-binding protein
translation: MVPVRKLVSLSLSVLLASGLIAHSAVADVIKLKLWTLNDRNAPMRTVNIEEAAGVLNQQFAAAGVDRKIVIDTHASAVQGWDDLALDTLKAFGVNQGPDIVLLPHEWIGEFARNGYAMPMDGQIKANPWVYADILPVLWEAMKYQGKVYGVPQDAEIRMFFYNKDMLRKIGKDEAFIDSLPARVDSGEFTMDDLTALAKEVVDRHAAPIGMLHRPNVGIDYLMVFAACGAKFMDEKTGKLLFAKKEVETALSWYARNVAAGVTPTDNTAMSWDTIQTAFKQEKAFLFHQGIWAMAWQVNDNFGPAWPADKAGYTHKIGWIPAPAAVKGGKPANLSHPIAYVVSNKSQYKDLAAQLVAIASLPYYNNRHAVSSYHTAISYAQTAMPQYTDNWALSEAGKMMKNITFVPNHARFGDYNRVLFKGLQAVETKRMTPAQAVDFIADELETQLGKDVEIVDSLH
SIO_010081: DDA3937_RS00300
subclass of: SO_0000673
so part of: DDA3937_RS00300
location: 70216..71595
location: region:70216-71595:1
so has part: feature:70216-71595:1:exon

WP_236616695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70216-71595:1:exon

DDA3937_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00305
old locus tag: Dda3937_01151
so part of: sequence
location: 71649..72566
location: region:71649-72566:1
so has part: feature:71649-72566:1:exon
subclass of: SO_0000010

9731449
type: Gene
SIO_000068: ncbigene

position:71649:1
position: 71649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72566:1
position: 72566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71649-72566:1:exon

DDA3937_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00305
old locus tag: Dda3937_01151
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942732.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter permease
translation: MPVTLSNRPAGVHPARWLAPAISVLAVFFVAPMLLNLVIAFSDMGSNLQISAFGTDNLMRLLVADKRLPAILLTTLVYVVSTLLLFNLGLGIVLAIATTAVPPALGALFRGIWFLPRISPSVLYALLWIWAADPSPHSLINQVVVGVFRLPPLNLRNDHPMILIVVANGLVGTSFAMVILASTIRAIPAHLWHAARVDGAGEWSVIRHVVLPALKSPVCFIALYQALSLMVTYEYILLITGGGPVYDTTTYALYIYRRAFESGAYGYGAMLALGLMVFGGLLTLLQWRMMNMRAQFTPPRIEVMR
SIO_010081: DDA3937_RS00305
subclass of: SO_0000673
so part of: DDA3937_RS00305
location: 71649..72566
location: region:71649-72566:1
so has part: feature:71649-72566:1:exon

WP_033112179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71649-72566:1:exon

DDA3937_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00310
old locus tag: Dda3937_01152
so part of: sequence
location: 72563..73609
location: region:72563-73609:1
so has part: feature:72563-73609:1:exon
subclass of: SO_0000010

9731450
type: Gene
SIO_000068: ncbigene

position:72563:1
position: 72563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73609:1
position: 73609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72563-73609:1:exon

DDA3937_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00310
old locus tag: Dda3937_01152
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848414.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate ABC transporter permease
translation: MTTMNAVDWARQAARSRWNRVGFLASVVLFLTLVSIPIVTPYLWLLAISFTHRDGDSEYQVLWRLLTIAALAYGLLLAVAWRARTEQRARRLRWLVGLAALLVFGLWVAPQLTLHNYRFLWNPDVQATGMQSGTLPSVWTALGNSLLFAGGHTLLVTLLAVPADYALSRLGFRRREGVLKALLLLHAFPVMALTVALFIQLYWMGLLNSLWGVMLVMCALELPFAIFVMKNFFDGVSWDIEMSAITDGASRFQAFRLVVLPQVTGGIIAIATFAFLRGWEEYIFVRTLLIDSGRMTMSLYLFWASQDSMGADSGLIAAVGVIYILPVLALYLLTQKYLTQMSVGGIKG
SIO_010081: DDA3937_RS00310
subclass of: SO_0000673
so part of: DDA3937_RS00310
location: 72563..73609
location: region:72563-73609:1
so has part: feature:72563-73609:1:exon

WP_033111491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72563-73609:1:exon

DDA3937_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00315
old locus tag: Dda3937_01153
so part of: sequence
location: 73614..74717
location: region:73614-74717:1
so has part: feature:73614-74717:1:exon
subclass of: SO_0000010

9731451
type: Gene
SIO_000068: ncbigene

position:73614:1
position: 73614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74717:1
position: 74717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73614-74717:1:exon

DDA3937_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00315
old locus tag: Dda3937_01153
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848413.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MAEIVLDGVTKAWGDTPVLHPVNLTLADGEFVAILGPSGCGKSTTLFLLAGLYAPTQGQILFDGQRVNGVDARDRNVGVVFQSYALYPHLSVYDNIAFPLRFKPAERAERDQRVREAAALVQVTELLERKPSALSGGQQQRVALARALVKRPSLLLLDEPLSNLDATLRMTMRTELKAIHARSRATTLMVTHDQLEAMTLASRIICMNQGRVEQIGTPQQLYRQPANTFVAGFIGSPPICLLPGQANGRWLTVGEISWGLSSTYHGALTLGIRPEDVTLTPLGAGPLSGRIEHIEPMGREVLYRLHTSLGPLQALAAGSTAQYDAGMLVGVSPSVDALLLFDADGNRLPDVGVVLPADVVSACRTAG
SIO_010081: DDA3937_RS00315
subclass of: SO_0000673
so part of: DDA3937_RS00315
location: 73614..74717
location: region:73614-74717:1
so has part: feature:73614-74717:1:exon

WP_033112180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73614-74717:1:exon

DDA3937_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00320
old locus tag: Dda3937_01154
so part of: sequence
location: 74745..75608
location: region:74745-75608:1
so has part: feature:74745-75608:1:exon
subclass of: SO_0000010

9731452
type: Gene
SIO_000068: ncbigene

position:74745:1
position: 74745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75608:1
position: 75608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74745-75608:1:exon

DDA3937_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00320
old locus tag: Dda3937_01154
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019845316.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease/exonuclease/phosphatase family protein
translation: MHIVSYNIQYGLGRDGRYDLARIADEVRGADIICMQEVERFWQRSGMMDQPAELAALLGEYHWVYGANLDMDASTVSADGRVVNRRRQFGTLTLSRRPILSSRNFPLPKFGTLTQHSIQQGVLETVIDTGAGAIRIYNTHLSHLCAGTRLPQVEAMLALFARAPDEGGAWCGGHPDPSAGWTEGRMPLMPLEMILMGDLNCLPDSEEYSRLVGPVSPHHGRLVRHRGLMDAWVAAGQPESSGSTHPSVGGRIDHCLLTPSLGLTVRRCWADTENQGSDHHPLWVELQ
SIO_010081: DDA3937_RS00320
subclass of: SO_0000673
so part of: DDA3937_RS00320
location: 74745..75608
location: region:74745-75608:1
so has part: feature:74745-75608:1:exon

WP_013315772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74745-75608:1:exon

DDA3937_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00325
old locus tag: Dda3937_01155
so part of: sequence
location: 75807..76073
location: region:75807-76073:1
so has part: feature:75807-76073:1:exon
subclass of: SO_0000010

9731453
type: Gene
SIO_000068: ncbigene

position:75807:1
position: 75807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76073:1
position: 76073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75807-76073:1:exon

DDA3937_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00325
old locus tag: Dda3937_01155
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886688.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1471 domain-containing protein
translation: MKAIKNFVAVIALATVSFGTFAATTSTATEVQQSASLSVGTVSATAATLDGLQASLSQKAGAAGAKSFRIISATSGENQMHGVAELYN
SIO_010081: DDA3937_RS00325
subclass of: SO_0000673
so part of: DDA3937_RS00325
location: 75807..76073
location: region:75807-76073:1
so has part: feature:75807-76073:1:exon

WP_013315773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75807-76073:1:exon

DDA3937_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00330
old locus tag: Dda3937_01156
so part of: sequence
location: complement(76197..76829)
location: region:76197-76829:-1
so has part: feature:76197-76829:-1:exon
subclass of: SO_0000010

9731454
type: Gene
SIO_000068: ncbigene

position:76197:-1
position: 76197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76829:-1
position: 76829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76197-76829:-1:exon

DDA3937_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00330
old locus tag: Dda3937_01156
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942735.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKITKGTEPASLTAWKRANPTGRYDDLTETERQDIRDACAKEQFYLCAYCCKPISGDNSDTMNEHVQARKLAPHRSLDFTNIAASCTTPNQCDAAHGSQPFSLTPLMAECETELQFMISGRVSGTTARAQDAIRVLNLGDNETHNKKLIEIRKQFIDSLLWTNGIDPDEGLEDDDLLTAVINDFSSPQNGRLTPYAPVLVNILRGWLSA
SIO_010081: DDA3937_RS00330
subclass of: SO_0000673
so part of: DDA3937_RS00330
location: complement(76197..76829)
location: region:76197-76829:-1
so has part: feature:76197-76829:-1:exon

WP_013315774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76197-76829:-1:exon

DDA3937_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00335
old locus tag: Dda3937_01157
so part of: sequence
location: complement(76813..78273)
location: region:76813-78273:-1
so has part: feature:76813-78273:-1:exon
subclass of: SO_0000010

9731455
type: Gene
SIO_000068: ncbigene

position:76813:-1
position: 76813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78273:-1
position: 78273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76813-78273:-1:exon

DDA3937_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00335
old locus tag: Dda3937_01157
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848409.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MKIKQFRLHNVGRFTSLDALIAPTADYPSNVTVLVGNNGAGKTSILQALATSLSWLVARVRSEKGSGSGINEGTITNGHTSAAIEVMAQDTPPLSGHAADNDAEYHWTLAKTRSGKKGQHTSQLNAVSALADHYRSALTQNEQSSLPLIAFYPVERSVLDIPLKIKNKHHFQQVDGYDNALNQGVDFRRFFEWFREREDIENENDGVVLTNLFESNPEGVLKVFEDIEDADYRVDKLEIFDWAGLSEEFKKLNNALKLMQEVQDKAKDPQLNAVRSAITAFMPGFSNLKVRRKPRLHMSVDKNGEAFNVLQLSQGEKSLMALVGDIARRLAIMNPTLDNPLHGQGIVLIDEVDMHLHPSWQRSIIERLTTTFPHCQFILTTHSPLVISDYKDVLVYSLDNGELTVVPSQYGQDANSVLLEVMDTHIRNARIAEKFSDLLDMIQRQQLTPAKALLDELTAELPATNLELTKARLLLRKQELRGEKNH
SIO_010081: DDA3937_RS00335
subclass of: SO_0000673
so part of: DDA3937_RS00335
location: complement(76813..78273)
location: region:76813-78273:-1
so has part: feature:76813-78273:-1:exon

WP_033111492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76813-78273:-1:exon

DDA3937_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00340
old locus tag: Dda3937_01158
so part of: sequence
location: complement(78371..79555)
location: region:78371-79555:-1
so has part: feature:78371-79555:-1:exon
subclass of: SO_0000010

9731456
type: Gene
SIO_000068: ncbigene

position:78371:-1
position: 78371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79555:-1
position: 79555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78371-79555:-1:exon

DDA3937_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00340
old locus tag: Dda3937_01158
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315776.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MEQFDVIIIGAGAAGLFCAAQAGQRGLRALLVDNGKKPGRKILMSGGGRCNFTNLYAEPAAYLSNNPHFCKSALARYTQWDFIDLVNRHGIAYHEKTLGQLFCDDSAQQIVDMLMKECETGKVTLRLRSEVSSVEKSEQFQVTLNTGVVQAPAVVVATGGLSMPGLGATPFGYQLATQFGLKVLPTRAALVPFTLHKPLLEQLQTLSGVSVPAVVTAENGTTFRENILFTHRGLSGPAVLQLSSYWQPGEFVTINLLPNLDLTECLNNERLAHPNQSLKNTLAQWLPKRLVESLQALGQLPDVTLKQLNKPQQAEVETTLQQWRVQPNGTEGYRTAEVTLGGVDTRELSSKTMEANNVPGLYFIGEVVDVTGWLGGYNFQWAWSSAWACAQALG
SIO_010081: DDA3937_RS00340
subclass of: SO_0000673
so part of: DDA3937_RS00340
location: complement(78371..79555)
location: region:78371-79555:-1
so has part: feature:78371-79555:-1:exon

WP_013315776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78371-79555:-1:exon

DDA3937_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: pitA
locus tag: DDA3937_RS00345
old locus tag: Dda3937_01159
so part of: sequence
location: 79859..81367
location: region:79859-81367:1
so has part: feature:79859-81367:1:exon
subclass of: SO_0000010

9731457
type: Gene
SIO_000068: ncbigene

position:79859:1
position: 79859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81367:1
position: 81367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79859-81367:1:exon

DDA3937_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: pitA
locus tag: DDA3937_RS00345
old locus tag: Dda3937_01159
function: 4.2.A.20 transport; Electrochemical potential driven transporters; Porters (Uni-, Sym- and Antiporters); The Inorganic Phosphate Transporter (PiT) Family
function: 4.S.155 transport; substrate; phosphate
function: 1.8.1 metabolism; metabolism of other compounds; phosphorous metabolism
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011193267.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic phosphate transporter PitA
translation: MLHLFAGLDFHTGLMLVLALLFVLFYEAINGFHDTANAVATVIYTRAMRAQLAVVMAGVFNFLGVLLGGLSVAYAIVHLLPTDLLLNVSSTHGLAMVFSMLLAAIIWNLGTWYFGLPASSSHTLIGSIIGIGLTNALVTHTSVVDALNIPKMVSIFLSLLVSPVVGMIIAGLMVYLLRRYWSNNKKRQRVHLTPAEREKQDGKRKPPFWTRTALILSAVGVSFSHGANDGQKGIGLIMLVLIGVAPAGFMLNMNASGYDISRTRDAVLNLQAYYQSHSAALTQVIDLSHPVIPAPENVIPSTGNKPDFHCDTSRAMIAIDRVQGLLNNIKSYDELAADDRARARRLLMCMADTLDRVVKLPETSSDDKRLLNNLRSDLLYTVEYAPLWIIVAVALALSLGTMVGWKRVAVTIGEKIGRKGMTYAQGVSAQVTAAMSIGIASYTGMPVSTTHVLSSAVAGTMIVDGGGVQGKTVKSILLAWVFTLPVSMLLSGVLYWLSLKLI
SIO_010081: DDA3937_RS00345
subclass of: SO_0000673
so part of: DDA3937_RS00345
location: 79859..81367
location: region:79859-81367:1
so has part: feature:79859-81367:1:exon

WP_013315777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79859-81367:1:exon

DDA3937_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: uspB
locus tag: DDA3937_RS00350
old locus tag: Dda3937_01160
so part of: sequence
location: complement(81499..81834)
location: region:81499-81834:-1
so has part: feature:81499-81834:-1:exon
subclass of: SO_0000010

9731458
type: Gene
SIO_000068: ncbigene

position:81499:-1
position: 81499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81834:-1
position: 81834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81499-81834:-1:exon

DDA3937_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: uspB
locus tag: DDA3937_RS00350
old locus tag: Dda3937_01160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014913651.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein UspB
translation: MISTFALFWALCVVCVINMARYYSSLRVLLLILRDCDPLLYQYVDGGGFFTSHGQPSKQLRLVRYIYAQRYLDHHDPEFIRRCARVRGQFLLTSALCGLVVVSLIALIIWH
SIO_010081: DDA3937_RS00350
subclass of: SO_0000673
so part of: DDA3937_RS00350
location: complement(81499..81834)
location: region:81499-81834:-1
so has part: feature:81499-81834:-1:exon

WP_024104057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81499-81834:-1:exon

DDA3937_RS22935
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS22935
old locus tag: Dda3937_04429
so part of: sequence
location: 81876..82418
location: region:81876-82418:1
so has part: feature:81876-82418:1:exon
subclass of: SO_0000010

56705025
type: Gene
SIO_000068: ncbigene

position:81876:1
position: 81876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82418:1
position: 82418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81876-82418:1:exon

DDA3937_RS22935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS22935
old locus tag: Dda3937_04429
function: 0 unknown function
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGPADITSVGIYATRYSRDVMGLPGHGELPGCSSSPLYPCLEKDLQGPPQFHCRRALRFFSISDARFLPAKNITTSFDLAPAFFAVGSVLFNYTFYIWARGFTVVDSFTVVESTGIVDSIGIVDSIGANGRPLQGKWLPAFSEPLQNMWRCDLWNITPNWWGVMLITVIGYQTGRRNIC
SIO_010081: DDA3937_RS22935
subclass of: SO_0000673
so part of: DDA3937_RS22935
location: 81876..82418
location: region:81876-82418:1
so has part: feature:81876-82418:1:exon

WP_013315779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81876-82418:1:exon

DDA3937_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: uspA
locus tag: DDA3937_RS00355
old locus tag: Dda3937_01161
so part of: sequence
location: 82453..82887
location: region:82453-82887:1
so has part: feature:82453-82887:1:exon
subclass of: SO_0000010

9731460
type: Gene
SIO_000068: ncbigene

position:82453:1
position: 82453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82887:1
position: 82887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82453-82887:1:exon

DDA3937_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: uspA
locus tag: DDA3937_RS00355
old locus tag: Dda3937_01161
function: 3.1.4 regulation; type of regulation; regulation level unknown
function: 5.5 cell processes; adaptation to stress
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315780.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein UspA
translation: MAYKHILIAVDLSPESKVLVEKAVSMARPYDAKVSLIHVDVNYSDLYTGLIDVNLGDMQQRISEETQNALKELADNAGYPISETLSGSGDLGQVLVDAIRKYDVDLVLCGHHQDFWSKLMSSARQLINTVHIDMLIVPLREEEE
SIO_010081: DDA3937_RS00355
subclass of: SO_0000673
so part of: DDA3937_RS00355
location: 82453..82887
location: region:82453-82887:1
so has part: feature:82453-82887:1:exon

WP_013315780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82453-82887:1:exon

DDA3937_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00360
old locus tag: Dda3937_01162
so part of: sequence
location: complement(82990..84996)
location: region:82990-84996:-1
so has part: feature:82990-84996:-1:exon
subclass of: SO_0000010

9731461
type: Gene
SIO_000068: ncbigene

position:82990:-1
position: 82990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84996:-1
position: 84996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82990-84996:-1:exon

DDA3937_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00360
old locus tag: Dda3937_01162
function: 5.3 cell processes; motility (incl. chemotaxis, energytaxis, aerotaxis, redoxtaxis)
function: 3.1.3.3 regulation; type of regulation; posttranscriptional; inhibition / activation of enzymes
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019845320.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MSIELISYPSSIQTPQVSPSATGKKTLSTRALVLITTVFIITCGFILTIGFLLWQSGQQQKTTAQQLLEQTAYTSAYSVQNRLDVALFAARDLVQSVISLREAGAPDRATAEQLLKNALKSHPDLLSMSLAWEPNAFDGKDQQYVSQPEQDPKGRFVRYVDRDGSGKVALHNLTDYETPGSGDYYLLPGKLQKEVILEPYSYPYNGVDVLLTSIAVPIMIDGKFYGSVTADFSLDTLQQMVNGIKPYQGAGYATMLSASGAYIAHPDKTRIAKKLEGDPPLMDSITAGKPYTRQRFNSFTNAEMMNAYVPVTIGNTGTPWMLGVSVPEQVVMAESVRLRYIGALMTLLSILVVSGVIGLIFTRKVLRPVGGEPADAAAIALAVAQGNLTLHIPVQPKDTSSIFYAMSEMQQQLRTIVEQLMSTSESVSHGAAEISAGNVDLASRTEQQAAALEETAASMEQITATVKQNADNAHSATRLTQNAAHIAQRGDEIVSQVVTVMGSIDESSKKISEITGIISSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSASAVKDITALIGESAERVGHGVGMVENAGKTMRDMLTAVTSVNDIMSEIVAASDEQSRGISQVTQAVHEMDGVTQQNAALVQQATAAAASLEDQARQLAQLVQVFRIH
SIO_010081: DDA3937_RS00360
subclass of: SO_0000673
so part of: DDA3937_RS00360
location: complement(82990..84996)
location: region:82990-84996:-1
so has part: feature:82990-84996:-1:exon

WP_013315781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82990-84996:-1:exon

DDA3937_RS22940
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS22940
so part of: sequence
location: 84989..85255
location: region:84989-85255:1
so has part: feature:84989-85255:1:exon
subclass of: SO_0000010

56705026
type: Gene
SIO_000068: ncbigene

position:84989:1
position: 84989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85255:1
position: 85255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84989-85255:1:exon

DDA3937_RS22940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS22940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDMMRTPLCEAVQWMKEKSTAGECVQPEPCPYCELHHVYDIDLDRGFFNVGFHKTGAVFLASSGEIALACGVVRLIIGEIHGDKTDCD
SIO_010081: DDA3937_RS22940
subclass of: SO_0000673
so part of: DDA3937_RS22940
location: 84989..85255
location: region:84989-85255:1
so has part: feature:84989-85255:1:exon

WP_139348277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84989-85255:1:exon

DDA3937_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: yidA
locus tag: DDA3937_RS00365
old locus tag: Dda3937_02521
so part of: sequence
location: 85230..86045
location: region:85230-86045:1
so has part: feature:85230-86045:1:exon
subclass of: SO_0000010

9731462
type: Gene
SIO_000068: ncbigene

position:85230:1
position: 85230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86045:1
position: 86045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85230-86045:1:exon

DDA3937_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: yidA
locus tag: DDA3937_RS00365
old locus tag: Dda3937_02521
EC number: 3.1.3.23
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315782.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar-phosphatase
translation: MAIKLIAIDMDGTLLTPENQISPAVKQAIVAAREKGVYVALATGRPFIGVERYLKQLGLQQEGHYCITNNGALVQRTATGECVAQTTLSFDDYLHFEALSRELGVHFHALDFNYVYTANKDISAYTVHESHLTSMPLKYRAVEEMDPSLRFPKVMMIDEPEVLDAAIARIPREDFARYTIMKSAAFYLEILDKRVNKGEGVKMLAQHLGLERDEVMALGDQENDLAMIEFAGLGVAMGNAIDVVKAASQFVTRSNSEDGVAYAIEKFVLNV
SIO_010081: DDA3937_RS00365
subclass of: SO_0000673
so part of: DDA3937_RS00365
location: 85230..86045
location: region:85230-86045:1
so has part: feature:85230-86045:1:exon

WP_013315782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85230-86045:1:exon

DDA3937_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: uxuA
locus tag: DDA3937_RS00370
old locus tag: Dda3937_02522
so part of: sequence
location: complement(86351..87535)
location: region:86351-87535:-1
so has part: feature:86351-87535:-1:exon
subclass of: SO_0000010

9731463
type: Gene
SIO_000068: ncbigene

position:86351:-1
position: 86351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87535:-1
position: 87535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86351-87535:-1:exon

DDA3937_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: uxuA
locus tag: DDA3937_RS00370
old locus tag: Dda3937_02522
EC number: 4.2.1.8
function: 1.1.1 metabolism; carbon utilization; carbon compounds
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886681.1
GO function: GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO process: GO:0006064 - glucuronate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannonate dehydratase
translation: MEHTWRWYGPNDPVSLDDARQAGATGIVTALHHIPNGEVWSIEEIKKRQAQLAEKGLIWSVVESVPIHEAIKTQTGDYRKYIANYQQSLRNLGACGIDTVCYNFMPVLDWTRTDLEYPLPDGSRALRFDHTAFAAFELHLLKRDGAAADYTDDEQRQAAAYFAAMSDADKDKLTRNIIAGLPGAEEGYTLDQFRAQLAQYDGIDKAKLREHMAEFLRAIVPVAEEAGIVLAVHPDDPPRPILGLPRIVSTIEDMQWLKDAVDSIHNGFTMCTGSYGVRADNDLVKMIETFADRIHFTHLRATCREDNPKSFHEAAHLHGDVDMVKVVKAILAEEYRRRQQGNTRAIPMRPDHGHQMLDDLKKKTNPGYSAIGRLKGLAEVRGVELAIKQTFFND
SIO_010081: DDA3937_RS00370
subclass of: SO_0000673
so part of: DDA3937_RS00370
location: complement(86351..87535)
location: region:86351-87535:-1
so has part: feature:86351-87535:-1:exon

WP_013315783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86351-87535:-1:exon

DDA3937_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00375
old locus tag: Dda3937_02523
so part of: sequence
location: 87794..88489
location: region:87794-88489:1
so has part: feature:87794-88489:1:exon
subclass of: SO_0000010

9731464
type: Gene
SIO_000068: ncbigene

position:87794:1
position: 87794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88489:1
position: 88489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87794-88489:1:exon

DDA3937_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00375
old locus tag: Dda3937_02523
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886680.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FadR/GntR family transcriptional regulator
translation: MVLPTLKVERLYRQISNLLINCIRNGQFAAGQLLPSERELAKQLGVSRSSIREALIALEITGWVEIRTGNGVYVNDPLPDAPPAAPPEEEFSLRAFIQARQVYEAMMAELAAVHATDEQRAALQDITRDLSRLHVNDAQFLHEDKRFHLLISEMSGNEVLQDMMDYLWNKRQSSRFVRLETLYADSDFPRTMNQDHADIAEAIVARDPARARASMERHLQHVYDHLFSGDK
SIO_010081: DDA3937_RS00375
subclass of: SO_0000673
so part of: DDA3937_RS00375
location: 87794..88489
location: region:87794-88489:1
so has part: feature:87794-88489:1:exon

WP_033111493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87794-88489:1:exon

DDA3937_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00380
old locus tag: Dda3937_02524
so part of: sequence
location: complement(88792..89796)
location: region:88792-89796:-1
so has part: feature:88792-89796:-1:exon
subclass of: SO_0000010

9731465
type: Gene
SIO_000068: ncbigene

position:88792:-1
position: 88792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89796:-1
position: 89796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88792-89796:-1:exon

DDA3937_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00380
old locus tag: Dda3937_02524
function: 8.3.1 extrachromosomal; transposon related; transposases
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315785.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110-like element ISEch4 family transposase
translation: MQNVTLIGIDLGKHSFHVHAQDKNGNALLRKKFSRNQLTAFLSTCTASTVVMESCAGAHFMARHISQFGHQVKLISPQFVRPFVKSNKNDFIDAEAICEAASRPSMRFVTPRTEDQQAMSAFHRVRDTLVRERVKTTNQMHAFLLEFGISMPRGIAIIRRLAVVLEEHELPPYLARLLMRLHQHYACLTEQIKELEQELKIHIAGDDTAQRLLTIPGVGLITASLLATKLGDGKSYASSRDFAASTGLVPRQYSTGGKSTLMGISKRGDKNLRRLLVQCARAFMQRLEHNQGRLADWVKTQLSRHHSNVVACGLANKLARIAWSVTTHRTAFIQ
SIO_010081: DDA3937_RS00380
subclass of: SO_0000673
so part of: DDA3937_RS00380
location: complement(88792..89796)
location: region:88792-89796:-1
so has part: feature:88792-89796:-1:exon

WP_013315785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88792-89796:-1:exon

DDA3937_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00385
old locus tag: Dda3937_02525
so part of: sequence
location: complement(89920..90177)
location: region:89920-90177:-1
so has part: feature:89920-90177:-1:exon
subclass of: SO_0000010

9731466
type: Gene
SIO_000068: ncbigene

position:89920:-1
position: 89920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90177:-1
position: 90177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89920-90177:-1:exon

DDA3937_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00385
old locus tag: Dda3937_02525
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886679.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1471 domain-containing protein
translation: MKNVKTIAIAATLATLSFGAFAAQSVSYEQAQQLDKIGSVSATANDLSSLQAKLAHQAEAAGASAYTITYAGGDNTLRGNAVIYK
SIO_010081: DDA3937_RS00385
subclass of: SO_0000673
so part of: DDA3937_RS00385
location: complement(89920..90177)
location: region:89920-90177:-1
so has part: feature:89920-90177:-1:exon

WP_013315786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89920-90177:-1:exon

DDA3937_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00390
old locus tag: Dda3937_02526
so part of: sequence
location: 90607..91893
location: region:90607-91893:1
so has part: feature:90607-91893:1:exon
subclass of: SO_0000010

9731467
type: Gene
SIO_000068: ncbigene

position:90607:1
position: 90607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91893:1
position: 91893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90607-91893:1:exon

DDA3937_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00390
old locus tag: Dda3937_02526
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942745.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3748 domain-containing protein
translation: MKNKDNQITHNAFSHQLTNINIWSCDGKWLIYDVRPHGSSFTGLTIERVNVETRRREVLYRAGQGAHVGVATGSPAAPQRYVFIHGPENPDEHWRYDFHHRRGVVMHDDDRRQATTLDACVLTSPYLAGALRGGSHVHVFSPDGSRLSFTYNDHVLHERDPALDLRNVGVAVPLHPVVAPHRHPREHDGSHFCVLVSDTTPQPRSGSDDINRAYEEGWVGTAGYLRPDGRRQRWALAFIGDTLSARGEKVPEVFLVDLPEQLDDYARPGDRPLGGTDAALPAPPAGVRQRRLTFTADRSYPGVVNQPRHWLRSSPDGSQIAFLMKDDRGVVQLWTVSPNGGAPRQVTQGDWPVQSAFSWHPDGRHLAFICDNSVMLCEVATGRLIRQTARSETPPVGDAVVFSPNGDRIAYLRDIDGYNQIFVVTVMR
SIO_010081: DDA3937_RS00390
subclass of: SO_0000673
so part of: DDA3937_RS00390
location: 90607..91893
location: region:90607-91893:1
so has part: feature:90607-91893:1:exon

WP_013315787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90607-91893:1:exon

DDA3937_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00395
old locus tag: Dda3937_02527
so part of: sequence
location: 92176..93762
location: region:92176-93762:1
so has part: feature:92176-93762:1:exon
subclass of: SO_0000010

9731468
type: Gene
SIO_000068: ncbigene

position:92176:1
position: 92176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93762:1
position: 93762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92176-93762:1:exon

DDA3937_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00395
old locus tag: Dda3937_02527
EC number: 2.7.1.-
function: 1.1.1 metabolism; carbon utilization; carbon compounds
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886677.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FGGY-family carbohydrate kinase
translation: MKNGCFIGVDVGSASVRAGVFDGAGQRLAFAVRPIEQFHPRTHMVEQSSADIWQAVGACVREALSVAAVAPSLVRAIGFDATCSLVAVGPQGQSVSMAEQHDPQRDIIMWMDHRAAVETADINATGDEALRYVGGEVSIEMELPKILWLKRHFPARYQQVWRFFDLADYLVWRATGADAASVCTLTCKWNYLAHENRFSDSLLQAVGLADLPQKIPPRILQLGEAAGTLAADVARDWGLPENVVVAGGIIDAHAGGLALVGSEPQGSLAVISGTSNCHMLVSRQPVEVPGVWGPYWGAMLPQWWLNEGGQSAAGALVEWTLRQHAQWPALTAQAEQQRRSPYALLNEWVASLEQREPLPTRHLHVLADHHGNRSPRANPDARGMVMGLTLEQGPDALARLYLATLQAIAYGTRHIIEALNQAGHQITRLTMCGGATKNPLWLREYAAITGCDIQLASEEDAVTLGAALLGAVACGAYPSLPQAAQALVQPGPLIRADRRNQPFHDAKYQIYLQMYDYQQAAQQQMSRH
SIO_010081: DDA3937_RS00395
subclass of: SO_0000673
so part of: DDA3937_RS00395
location: 92176..93762
location: region:92176-93762:1
so has part: feature:92176-93762:1:exon

WP_013315788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92176-93762:1:exon

DDA3937_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00400
old locus tag: Dda3937_02528
so part of: sequence
location: 93813..95483
location: region:93813-95483:1
so has part: feature:93813-95483:1:exon
subclass of: SO_0000010

9731469
type: Gene
SIO_000068: ncbigene

position:93813:1
position: 93813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95483:1
position: 95483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93813-95483:1:exon

DDA3937_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00400
old locus tag: Dda3937_02528
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019845326.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal transduction protein
translation: MLEQRVSLTLNLPASPRRLSVGEREVLLVTNADLRESANLTCWPTQQQFEGRLQSALEQLGYRMTRAHAVDSARGHGFISSQREGSDVFAALDPDAPVIVLLTAWQYSHHVAPSLVHHRGPVLLLANFDGTWPGLVGMLCMAGCLTSLGRDYSRLWSATFDDDAFRQGLATWLRDGTVSHKTGYLRPVAASHPVLATPAGQIGRQVGEYILRHKAIIGLFDTFCMGMINGVFPQQAMVTIGMPIESLSQSALLVEMAKVPYALRESCLAWYEQRGMRFEFGDDGSRQLTRDQVLEQCAMMIAMARFTQRFGLAAVGVQYQQGLKDSCAASDFAEGAIGNAERFPLPDEQGEPIRPDVAIPCINEVDMGSAIPQVMLWHLLHGLGLPAETTLHDIRWGSEHQGVFYWDLEISGAVPFAHLKGGIAGATGYRQPPMFFPYGGSTIAGQGKAGRFVWARAHYEGTQVMMHIGTGTAVELPADEFERRRRATNYEWPLLNAVLDGVTRDDLMAGHQSNHLTVAYVDEDKLAEVLKAFVAQALTQHIQVWTAGDAHRLLVE
SIO_010081: DDA3937_RS00400
subclass of: SO_0000673
so part of: DDA3937_RS00400
location: 93813..95483
location: region:93813-95483:1
so has part: feature:93813-95483:1:exon

WP_013315789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93813-95483:1:exon

DDA3937_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00405
old locus tag: Dda3937_02529
so part of: sequence
location: 95487..96446
location: region:95487-96446:1
so has part: feature:95487-96446:1:exon
subclass of: SO_0000010

9731470
type: Gene
SIO_000068: ncbigene

position:95487:1
position: 95487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96446:1
position: 96446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95487-96446:1:exon

DDA3937_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00405
old locus tag: Dda3937_02529
function: 7.1 location of gene products; cytoplasm
function: 1.5.1.7 metabolism; building block biosynthesis; amino acids; lysine, diaminopimelate
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855564.1
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrodipicolinate synthase family protein
translation: MTYDNPSFNDENKYAGIWPVMLTPFDARGEIDYASLARLVEWYLDAGVHGLFAACQSSEMFFLSDAETRELVRFIVAQVDGRVPVVASGHTASAFSQQVDQLNGVAETGVDGVILISNRLALAGEPDEQALARLQALTAQLPAQVDLGIYECPYPYKRLLSDETVAWCARSGRYTFIKDTCCDLPTIRRRLQLAQNSRLHLANANSQTLLASLQAGCQAYSGVMANFHPQLYVWLFEHWREHPAAAQQLADYLGTAALAEFLDYPACAKFYQQQCGTFSTHVCRVRNSAAYGESFFPQAIESMLRLGQTLETQLPASLR
SIO_010081: DDA3937_RS00405
subclass of: SO_0000673
so part of: DDA3937_RS00405
location: 95487..96446
location: region:95487-96446:1
so has part: feature:95487-96446:1:exon

WP_013315790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95487-96446:1:exon

DDA3937_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00410
old locus tag: Dda3937_02530
so part of: sequence
location: 96463..97509
location: region:96463-97509:1
so has part: feature:96463-97509:1:exon
subclass of: SO_0000010

9731471
type: Gene
SIO_000068: ncbigene

position:96463:1
position: 96463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97509:1
position: 97509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96463-97509:1:exon

DDA3937_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00410
old locus tag: Dda3937_02530
EC number: 3.2.1.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886674.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exo-alpha-sialidase
translation: MKLTMTTQQFVLPEGHDYFGNCHASTVAVLPEGRLRVAWFAGEKEGSGDTAIWLACAEQGRWLQPVRVAWEDGVAHWNPVLHWQAGTLWLFYKVGADVHHWQTRVAVSTDDGASWSAPRLLVPGDSAPRGPVKNKLLVMSNGEWLAPASVEDDRHWDAFVDLSGDRGRSWQTAPIPLTHRTPGERDGEALWQGLEQAALWENDLTRVFQWDGVIQPSAWESSPGQVHVLMRSTRGALYRSDSDDYGRRWREAYAIDLPNNNSGVDLAHLGAGRLVLVYNPVTGNWRHRYPLTVACSTDNGEHWENSIDLEQEPGEFSYPAIIADGDTLHVTYTWNRKNIVYCALIFSG
SIO_010081: DDA3937_RS00410
subclass of: SO_0000673
so part of: DDA3937_RS00410
location: 96463..97509
location: region:96463-97509:1
so has part: feature:96463-97509:1:exon

WP_033111494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96463-97509:1:exon

DDA3937_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00415
old locus tag: Dda3937_02531
so part of: sequence
location: 97623..98972
location: region:97623-98972:1
so has part: feature:97623-98972:1:exon
subclass of: SO_0000010

9731472
type: Gene
SIO_000068: ncbigene

position:97623:1
position: 97623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98972:1
position: 98972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97623-98972:1:exon

DDA3937_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00415
old locus tag: Dda3937_02531
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 4.2.A.1 transport; Electrochemical potential driven transporters; Porters (Uni-, Sym- and Antiporters); The Major Facilitator Superfamily (MFS)
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942749.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MSISVELSQHQAMHNKSNIRRVVISSWIGNTIEFYDFLLYGLASALVFGKLFFPTVSPMAAMLASFATFGVGFIARPLGGIFFGHMGDTLGRKLTLLITLGGMGMATFLIGCLPTYHQIGVWAPVLLVVLRFVQGFLVGGEWGGAMLMVVETAPANRRGLLGSIPQTGGFSGQLLATAIFAMVSTLPEDQLMSWGWRVPFMLSVALVLVGLYMRRKVDETPVFQQVQQQQQQQTHEQEPVRRQSPVVEVLRKQWRSVCLIMVLRFAESVPFFLATVFAVSYATVQLGVPKQTMLNVIMATCVMAFPMHALFGALSDRVGRRPIYIFGALCAAAMAFPFFYLLESGSFGLMVLGYILLINIAHNSINAVQPAFFTELFGPKVRYSGASIGAQLGAIVAGGFTPFIAKGLTAMDNESWTLVATYVTVAALVAAFAAWKAPETSHRDMTKDV
SIO_010081: DDA3937_RS00415
subclass of: SO_0000673
so part of: DDA3937_RS00415
location: 97623..98972
location: region:97623-98972:1
so has part: feature:97623-98972:1:exon

WP_013315792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97623-98972:1:exon

DDA3937_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00420
old locus tag: Dda3937_02532
so part of: sequence
location: 99073..100077
location: region:99073-100077:1
so has part: feature:99073-100077:1:exon
subclass of: SO_0000010

9731473
type: Gene
SIO_000068: ncbigene

position:99073:1
position: 99073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100077:1
position: 100077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99073-100077:1:exon

DDA3937_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00420
old locus tag: Dda3937_02532
function: 1.1.1 metabolism; carbon utilization; carbon compounds
function: 3.1.2.3 regulation; type of regulation; transcriptional level; repressor
function: 7.1 location of gene products; cytoplasm
function: 2.2.2 information transfer; RNA related; transcription related
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942750.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LacI family DNA-binding transcriptional regulator
translation: MAKTVEQIASALKLSVTTVRLVLNGKAEQYRISAKTQQRIHQYVTEYGYTVNHVARSLKLNKTETLGLIVPRLSNLFFSTLAEKLETRCREVGYQLMISCSYSDPQYENRLVEALLQRNVDGLFVVPSSLQAAQHHAKVVKKPLVLLDRDFGIDQLPLVMSDNLQGGAALTEAMLAAQPAAPLFFMAGDVQQSAIRDRLRGYRQSVQQAGLTPAVLEASHNRREDGMLMMEQFLRQHDAPPPAFIASSLPVLEGMLSVVRERYGYIPAHINIGTFDEHAMLGFLPNTLWSMRQNEDAWTEQAFAAMQQALNGEAQPHKAVIPMTLIHRRQAERH
SIO_010081: DDA3937_RS00420
subclass of: SO_0000673
so part of: DDA3937_RS00420
location: 99073..100077
location: region:99073-100077:1
so has part: feature:99073-100077:1:exon

WP_013315793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99073-100077:1:exon

DDA3937_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00425
old locus tag: Dda3937_02533
so part of: sequence
location: complement(100071..100439)
location: region:100071-100439:-1
so has part: feature:100071-100439:-1:exon
subclass of: SO_0000010

9731474
type: Gene
SIO_000068: ncbigene

position:100071:-1
position: 100071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100439:-1
position: 100439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100071-100439:-1:exon

DDA3937_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00425
old locus tag: Dda3937_02533
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848397.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YceK/YidQ family lipoprotein
translation: MTILKNASLSFVLSGGILVTCGGCSSVMTHSGGEQGYYSGTKSSMTTLKNEDTSWAMMPMVALDVPFSAMLDTLLLPYDYYRTHSDHHNTSARDRLEEYERRKPAGDPPPTMIPVSANNAGQ
SIO_010081: DDA3937_RS00425
subclass of: SO_0000673
so part of: DDA3937_RS00425
location: complement(100071..100439)
location: region:100071-100439:-1
so has part: feature:100071-100439:-1:exon

WP_033111495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100071-100439:-1:exon

DDA3937_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ibpA
locus tag: DDA3937_RS00430
old locus tag: Dda3937_02534
so part of: sequence
location: 100743..101156
location: region:100743-101156:1
so has part: feature:100743-101156:1:exon
subclass of: SO_0000010

9731475
type: Gene
SIO_000068: ncbigene

position:100743:1
position: 100743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101156:1
position: 101156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100743-101156:1:exon

DDA3937_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ibpA
locus tag: DDA3937_RS00430
old locus tag: Dda3937_02534
function: 7.1 location of gene products; cytoplasm
function: 5.5.2 cell processes; adaptation to stress; temperature extremes
function: 5.5.6 cell processes; adaptation to stress; other (mechanical, nutritional, oxidative stress)
function: 2.3.4 information transfer; protein related; chaperoning, folding
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209636.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: small heat shock chaperone IbpA
translation: MRNPDFSPLYRSAIGFDRLFNLLEAGQSQGNGGYPPYNVELVDENQYRIAIAVAGFAESELEITAHDNMLIVKGSHSGDATPRNYLYQGIAERNFERKFQLAEHIQINGANLENGLLFIDLQRVIPETLKPRRIEIK
SIO_010081: DDA3937_RS00430
subclass of: SO_0000673
so part of: DDA3937_RS00430
location: 100743..101156
location: region:100743-101156:1
so has part: feature:100743-101156:1:exon

WP_013315795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100743-101156:1:exon

DDA3937_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ibpB
locus tag: DDA3937_RS00435
old locus tag: Dda3937_02535
so part of: sequence
location: 101307..101756
location: region:101307-101756:1
so has part: feature:101307-101756:1:exon
subclass of: SO_0000010

9731476
type: Gene
SIO_000068: ncbigene

position:101307:1
position: 101307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101756:1
position: 101756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101307-101756:1:exon

DDA3937_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ibpB
locus tag: DDA3937_RS00435
old locus tag: Dda3937_02535
function: 5.5.2 cell processes; adaptation to stress; temperature extremes
function: 5.5.6 cell processes; adaptation to stress; other (mechanical, nutritional, oxidative stress)
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848395.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: small heat shock chaperone IbpB
translation: MRNYDLSPLLRQWIGFDKLASAMGSQEAVEFPPYNIEKVDDNHYRITLALAGFRQSELDIEVEGQRLTVKGAPTLPEKKAQYLHQGLVFKPFSLSFTLAEHLHVSDAQFQHGLLHIDLIRDVPQALQPQRIAIGRRAPELQEKAPDEQA
SIO_010081: DDA3937_RS00435
subclass of: SO_0000673
so part of: DDA3937_RS00435
location: 101307..101756
location: region:101307-101756:1
so has part: feature:101307-101756:1:exon

WP_013315796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101307-101756:1:exon

DDA3937_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00440
old locus tag: Dda3937_02536
so part of: sequence
location: 102431..103843
location: region:102431-103843:1
so has part: feature:102431-103843:1:exon
subclass of: SO_0000010

9731477
type: Gene
SIO_000068: ncbigene

position:102431:1
position: 102431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103843:1
position: 103843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102431-103843:1:exon

DDA3937_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00440
old locus tag: Dda3937_02536
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011095861.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anion permease
translation: MSANNSRLVKLLIILGIAVIFWFVPVPEGVSPAAWHLLAIFIATVIGLILSPYPLGAIAIFSITAVAALGLLPVKDVLVGFGDPTIWMIACAFFISRSFIKTGFGRRIGFLFISKLGNSSLGLAYGLVFTDLLFSPAMPSTSARCGGIITPLFRSIAEAYGSTPEQGTQRRIGSFLVQTIFQCNAITSAMFMTSMAGNPLISKLATQFGVHLTWTEWAAATLVPGLLSLIVIPLVLYRFYPPELKKTPEMRELAKVRLHEMGPMSRNEWIVLCVFLGLVVFWVLGSTLNIDATLTALGGLSVLLLTRALSWEDVTGEKEAWHTVVWFAVLMMLATQLNKMGLIAWLGGIAGHAVAGMHWLPMVGLLLLVYYYSHYFMASAVAHISAMYAIFVSIAIAAGAPPVLTVLAFAAFSNLFMATTHYSGGPAPIMFGCGYLSLGTWWKIGFLVGLVVIPIWLGIGSLWWKVLGMW
SIO_010081: DDA3937_RS00440
subclass of: SO_0000673
so part of: DDA3937_RS00440
location: 102431..103843
location: region:102431-103843:1
so has part: feature:102431-103843:1:exon

WP_033111496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102431-103843:1:exon

DDA3937_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00445
old locus tag: Dda3937_02537
so part of: sequence
location: 104003..105616
location: region:104003-105616:1
so has part: feature:104003-105616:1:exon
subclass of: SO_0000010

9731478
type: Gene
SIO_000068: ncbigene

position:104003:1
position: 104003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105616:1
position: 105616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104003-105616:1:exon

DDA3937_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00445
old locus tag: Dda3937_02537
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 3.1.2.4.3 regulation; type of regulation; transcriptional level; complex regulation; two component regulatory systems (external signal)
function: 3.1.3.2 regulation; type of regulation; posttranscriptional; covalent modification, demodification, maturation
function: 1.3.7 metabolism; energy metabolism, carbon; anaerobic respiration
function: 2.3.3 information transfer; protein related; posttranslational modification
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942755.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor histidine kinase
translation: MSKKKTPLKLGTSIILMVSAVIGSVLLVVYALLFFRITELTETHLKDKAFAIARTVANSPIVVDDLKGIGDPMLVQRFSEDVKSRNHLLFVIVTDMDGIRHSHPEPGQIGRHFIGDDLYPALLGLENTAVNRGVLDPALRVFTPVFDKNNQQLGVVAVGISLSSVQSVINENRWIIPWTILFGALVGLLGTYFLVKTLKRIMLGFEPFEISNLFEQRNAMLKQIKEGVIAVDTDLRVTIINDEAKRLFSQHGSGETLAIGSTISRWPALMNLEKVLETGAPRQDEEINFNGNLLLINTVPVVVKGDIIGTIATFRDKTEVSQLLQRLTGMSYYADALRAQSHEFMNKLHVILGMLHLKYYPQLEEYILKTANNYQAEIGSIIRKVKSPVIAGFLLGKINRARDLGVTLSISEDSLLPDTDDAQATNELITVLGNLIENAMDALSGLENREISVTFHHQDGQLHCTVSDDGPGIAPDIQQRIYQEGFSTKGSGRGIGLYLTRQSLEKIGGTIDFESEPDVYTQFFVNIPYQARQFDHD
SIO_010081: DDA3937_RS00445
subclass of: SO_0000673
so part of: DDA3937_RS00445
location: 104003..105616
location: region:104003-105616:1
so has part: feature:104003-105616:1:exon

WP_013315798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104003-105616:1:exon

DDA3937_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: dcuR
locus tag: DDA3937_RS00450
old locus tag: Dda3937_02538
so part of: sequence
location: 105629..106351
location: region:105629-106351:1
so has part: feature:105629-106351:1:exon
subclass of: SO_0000010

9731479
type: Gene
SIO_000068: ncbigene

position:105629:1
position: 105629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106351:1
position: 106351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105629-106351:1:exon

DDA3937_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: dcuR
locus tag: DDA3937_RS00450
old locus tag: Dda3937_02538
function: DcuR controls the genes encoding anaerobic fumarate respiratory system
function: 7.1 location of gene products; cytoplasm
function: 1.3.7 metabolism; energy metabolism, carbon; anaerobic respiration
function: 3.1.2.4.3 regulation; type of regulation; transcriptional level; complex regulation; two component regulatory systems (external signal)
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2 regulation; type of regulation; transcriptional level
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005976762.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: two-component system response regulator DcuR
translation: MINVLIVDDDAMVAELNKCYLNQISGFSCYATVPTLQQARNLLMQPDCEIDLVLLDIYMQQDNGLDLLPTIREFSEHTDVIIISSASDVYTIKKALHYGVVDYLIKPFQFARFEQALTAYREEANLLKHREFVAQSDIDNLIRRTSGTPTVERKKLPKGLTSLTLRTVCEWVEGNQGAEFSTEMLANAIGISRVSCRKYLIYLADTGILDTNILYGSTGRPVYLYRLLPEKQDALRQYCE
SIO_010081: DDA3937_RS00450
subclass of: SO_0000673
so part of: DDA3937_RS00450
location: 105629..106351
location: region:105629-106351:1
so has part: feature:105629-106351:1:exon

WP_013315799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105629-106351:1:exon

DDA3937_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00455
old locus tag: Dda3937_02539
so part of: sequence
location: complement(106457..107800)
location: region:106457-107800:-1
so has part: feature:106457-107800:-1:exon
subclass of: SO_0000010

9731480
type: Gene
SIO_000068: ncbigene

position:106457:-1
position: 106457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107800:-1
position: 107800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106457-107800:-1:exon

DDA3937_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00455
old locus tag: Dda3937_02539
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886665.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-hydroxycarboxylate transporter family protein
translation: MKNIETEIMSDNTLATTAPSGLLESLNKTRIGSVPFILFLVISAVVFIAAYASYLPKNMIGGFAVIMTMGFLLAYIGQRIPVLKEIGGPAILCLMVPSILVYFHLFNANTLDTVKLLMKDANFLYFVIASLVVGSILGMNRVILIQGMIRMFIPLVIGTAAAVVTGLLVGKLFGYSFYHTFFFIIVPIIGGGIGEGILPLSLAYSAILGQAPDVYVAQLVPAAVVGNIFAIICAGVLARIGVWRSDLNGNGNLVRNEADNALFAVKDAPKTVDFHLMGGGLLLICTFFIVGGLFEKVLHIPGPVLMILIAVLCKYGRVIPSSMETGANSFYKFVSSSLVWPLMIGLGMLYVPLESVVAVFSVGYVVVCGSVVLSMALISFFIAPYLKMYPVEASIVTSCHSGLGGTGDVAILSASNRMSLMPFAQIATRIGGASTVIAATLLLGWLV
SIO_010081: DDA3937_RS00455
subclass of: SO_0000673
so part of: DDA3937_RS00455
location: complement(106457..107800)
location: region:106457-107800:-1
so has part: feature:106457-107800:-1:exon

WP_033111497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106457-107800:-1:exon

DDA3937_RS23380
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23380
so part of: sequence
location: 107892..108065
location: region:107892-108065:1
so has part: feature:107892-108065:1:exon
subclass of: SO_0000010

56705085
type: Gene
SIO_000068: ncbigene

position:107892:1
position: 107892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108065:1
position: 108065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107892-108065:1:exon

DDA3937_RS23380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAKYNHIWAQIMYGRKVQQPCGTPSKAKGDVIFIAGCSLGNLAWVNVKNNSRSLQI
SIO_010081: DDA3937_RS23380
subclass of: SO_0000673
so part of: DDA3937_RS23380
location: 107892..108065
location: region:107892-108065:1
so has part: feature:107892-108065:1:exon

WP_158305112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107892-108065:1:exon

DDA3937_RS22950
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS22950
so part of: sequence
location: 108795..109088
location: region:108795-109088:1
so has part: feature:108795-109088:1:exon
subclass of: SO_0000010

56705027
type: Gene
SIO_000068: ncbigene

position:108795:1
position: 108795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109088:1
position: 109088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108795-109088:1:exon

DDA3937_RS22950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS22950
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIDPTGLAGFFLLVPHCCLSLFTITSVSGRVPRAGTEKSTDHRDKNRRDNPQRDSNVAMTTVVMTAIAMTTIVMTTIAMTTTGLTDTQHPQWSSCNG
SIO_010081: DDA3937_RS22950
subclass of: SO_0000673
so part of: DDA3937_RS22950
location: 108795..109088
location: region:108795-109088:1
so has part: feature:108795-109088:1:exon

WP_148226852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108795-109088:1:exon

DDA3937_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00460
old locus tag: Dda3937_02540
so part of: sequence
location: 109081..110688
location: region:109081-110688:1
so has part: feature:109081-110688:1:exon
subclass of: SO_0000010

9731481
type: Gene
SIO_000068: ncbigene

position:109081:1
position: 109081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110688:1
position: 110688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109081-110688:1:exon

DDA3937_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00460
old locus tag: Dda3937_02540
function: 7.2 location of gene products; periplasmic space
function: 1.1.3 metabolism; carbon utilization; amino acids
function: 4.3.A.1.p transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, periplasmic binding component
function: 4.S.47 transport; substrate; dipeptide
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011817398.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MAKSLMKSRVLKFSLGLLALSVAAGVQAKTLVYCSEGSPEGFNPQLFTSGTTFDASSIPIYNRLVEFKNGTTEIEPGLAEKWDISADGKTYTFHLRKDVKWQDNKEFKPSRTFNADDVLFSFQRQMDANHPFHKVSGGSYEYFEGMGMPDLISKIEKVDDYTVRFQLTRAEAPFLADLAMDFASIMSAEYGDKMLKAGSPEKIDLDPIGTGPFQLQQYQKDSRILYKRFDSFWGTKPGIDRLVFSITPDASVRYAKLQKDECQVMPYPNPADLASMKQDKNIELLQKPGLNVGYLSFNVEKKPLDNVKVRQALTYAVNKQAIIEAVYQGAGQAAKNLIPPTMWGYNDDVKDYAYDPAKAKALLKEAGLENGFEIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVKAKIVTYEWGEYLKRAKAGEHQTVLMGWTGDNGDPDNFLATLFSCDAAKKGSNYSKWCYKPFEDLIQPARAVSDQAKRIELYKQAQVVMHDQAPALIVAHSTVYEPIRKNVKGYVIEPRGVHSFNHVSVD
SIO_010081: DDA3937_RS00460
subclass of: SO_0000673
so part of: DDA3937_RS00460
location: 109081..110688
location: region:109081-110688:1
so has part: feature:109081-110688:1:exon

WP_013315801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109081-110688:1:exon

DDA3937_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: dppB
locus tag: DDA3937_RS00465
old locus tag: Dda3937_02541
so part of: sequence
location: 110917..111936
location: region:110917-111936:1
so has part: feature:110917-111936:1:exon
subclass of: SO_0000010

9731482
type: Gene
SIO_000068: ncbigene

position:110917:1
position: 110917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111936:1
position: 111936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110917-111936:1:exon

DDA3937_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: dppB
locus tag: DDA3937_RS00465
old locus tag: Dda3937_02541
EC number: 7.4.2.-
function: 1.1.3 metabolism; carbon utilization; amino acids
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 1.2.3 metabolism; macromolecule degradation; proteins/peptides/glycopeptides
function: 4.S.47 transport; substrate; dipeptide
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dipeptide ABC transporter permease DppB
translation: MLQFILRRLGLVIPTFIGITLLTFAFVHLIPGDPVMIMAGERGISPERHAQLMAELGLDKPLWEQYLHYINGVLHGDLGMSLKSRIPVWDEFVPRFKATLELGVCAMIFAVIVGIPVGVLAAVKRGSVFDHTAVSIALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRVGDTVFLDDSLPLTGFMLIDTLIWGAEGDFKDAVMHMLLPAVVLGTIPLAVIVRMTRSAMLEVLGEDYIRTARAKGLGRLRVIVVHALRNAMLPVVTVIGLQVGTMLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQSGVLLVATMIILVNLLVDVLYGVVNPRIRHKK
SIO_010081: DDA3937_RS00465
subclass of: SO_0000673
so part of: DDA3937_RS00465
location: 110917..111936
location: region:110917-111936:1
so has part: feature:110917-111936:1:exon

WP_013315802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110917-111936:1:exon

DDA3937_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: dppC
locus tag: DDA3937_RS00470
old locus tag: Dda3937_02542
so part of: sequence
location: 111949..112851
location: region:111949-112851:1
so has part: feature:111949-112851:1:exon
subclass of: SO_0000010

9731483
type: Gene
SIO_000068: ncbigene

position:111949:1
position: 111949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112851:1
position: 112851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111949-112851:1:exon

DDA3937_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: dppC
locus tag: DDA3937_RS00470
old locus tag: Dda3937_02542
EC number: 7.4.2.-
function: 1.1.3 metabolism; carbon utilization; amino acids
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 1.2.3 metabolism; macromolecule degradation; proteins/peptides/glycopeptides
function: 4.S.47 transport; substrate; dipeptide
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008457611.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dipeptide ABC transporter permease DppC
translation: MTHVTESAATTAPKPMTPLQEFWHYFKRNKGAVVGLVYIILMLVVAIGASVLAPHSPAEQFRDALLKPPVWQEGGSWQYIFGTDDVGRDVLSRLMYGARLSLLVGCLVVVMSLILGVVFGLVAGYFGGAVDAAIMRLVDIMLALPSLLLALVLVAIFGPSIVNASLALTFVSLPHYVRLTRAAVLVEVNRDYVTASRVAGAGPLRQMFVNILPNCLAPLIVQASMGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPKLKQ
SIO_010081: DDA3937_RS00470
subclass of: SO_0000673
so part of: DDA3937_RS00470
location: 111949..112851
location: region:111949-112851:1
so has part: feature:111949-112851:1:exon

WP_013315803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111949-112851:1:exon

DDA3937_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: dppD
locus tag: DDA3937_RS00475
old locus tag: Dda3937_02543
so part of: sequence
location: 112880..113860
location: region:112880-113860:1
so has part: feature:112880-113860:1:exon
subclass of: SO_0000010

9731484
type: Gene
SIO_000068: ncbigene

position:112880:1
position: 112880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113860:1
position: 113860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112880-113860:1:exon

DDA3937_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: dppD
locus tag: DDA3937_RS00475
old locus tag: Dda3937_02543
EC number: 7.4.2.-
function: 7.1 location of gene products; cytoplasm
function: 1.1.3 metabolism; carbon utilization; amino acids
function: 4.3.A.1.a transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP binding cytoplasmic component
function: 4.S.47 transport; substrate; dipeptide
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005187008.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0015833 - peptide transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dipeptide ABC transporter ATP-binding protein
translation: MALLNVEKLSVHFGDEGLPFRAVDRISYQVEQGQVVGIVGESGSGKSVSSLAIMGLIDFPGKVMADRLEFNQRDLQTLSDRERRQLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNRKTRRQRAIDLLNQVGIPDPESRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALILITHDLALVAEAAHHIIVMYAGQVVESGKASDIFRAPRHPYTQALLRALPEFAVDKSRLASLPGVVPGKYDRPNGCLLNPRCPYASDRCRQEEPEMRDIPGRQVKCHTPLDDAGRPTV
SIO_010081: DDA3937_RS00475
subclass of: SO_0000673
so part of: DDA3937_RS00475
location: 112880..113860
location: region:112880-113860:1
so has part: feature:112880-113860:1:exon

WP_013315804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112880-113860:1:exon

DDA3937_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00480
old locus tag: Dda3937_01979
so part of: sequence
location: 113857..114864
location: region:113857-114864:1
so has part: feature:113857-114864:1:exon
subclass of: SO_0000010

9731485
type: Gene
SIO_000068: ncbigene

position:113857:1
position: 113857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114864:1
position: 114864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113857-114864:1:exon

DDA3937_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00480
old locus tag: Dda3937_01979
EC number: 7.4.2.-
function: 1.1.3 metabolism; carbon utilization; amino acids
function: 4.3.A.1.a transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP binding cytoplasmic component
function: 7.1 location of gene products; cytoplasm
function: 4.S.47 transport; substrate; dipeptide
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848385.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide ABC transporter ATP-binding protein
translation: MSQTMNAAGQPYLLQAIDLKKHYPVKKGLFAPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLGRLLTMIETPSHGELYYQGQDLLKPDPAAQKLRRQKIQIVFQNPYASLNPRKKVGQILEEPLVINTDLSKAERREKALAMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQDLGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGSKDAIFSNPRHPYTQALLSATPRLNPDARRERIKLTGELPSPLSPPPGCAFNARCQHRFGTCTQLQPQLKPHGEQLVACFAVEQEDSQVS
SIO_010081: DDA3937_RS00480
subclass of: SO_0000673
so part of: DDA3937_RS00480
location: 113857..114864
location: region:113857-114864:1
so has part: feature:113857-114864:1:exon

WP_013315805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113857-114864:1:exon

DDA3937_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00485
old locus tag: Dda3937_01980
so part of: sequence
location: complement(114970..115503)
location: region:114970-115503:-1
so has part: feature:114970-115503:-1:exon
subclass of: SO_0000010

9731486
type: Gene
SIO_000068: ncbigene

position:114970:-1
position: 114970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115503:-1
position: 115503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114970-115503:-1:exon

DDA3937_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00485
old locus tag: Dda3937_01980
function: 0 unknown function
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF3828 domain-containing protein
translation: MNKLLPLALLLSAASYAADAPAPKHADADTLKAELTAPSAAPAAEEEEEEYVDTDAAAKQAIAFYQWYLGQIMQNKLPIQDNDPALEKYVARDTVKALRTSKVSTDVDFFLRSNGPDEEDWLPNVRVVGTDVDPVCVNLYMELGKRSPKRLVSCYVQENSVWKLRSVTDLDEMFTKK
SIO_010081: DDA3937_RS00485
subclass of: SO_0000673
so part of: DDA3937_RS00485
location: complement(114970..115503)
location: region:114970-115503:-1
so has part: feature:114970-115503:-1:exon

WP_013315806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114970-115503:-1:exon

DDA3937_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00490
old locus tag: Dda3937_01981
so part of: sequence
location: complement(115562..115789)
location: region:115562-115789:-1
so has part: feature:115562-115789:-1:exon
subclass of: SO_0000010

23677378
type: Gene
SIO_000068: ncbigene

position:115562:-1
position: 115562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115789:-1
position: 115789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115562-115789:-1:exon

DDA3937_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00490
old locus tag: Dda3937_01981
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAFNGHGSRITLSTMEQLAGQAGLSKAKAVLDMADELYDVAKGFHQEASHFNLPAPLITTIQREIDSKWRQLRE
SIO_010081: DDA3937_RS00490
subclass of: SO_0000673
so part of: DDA3937_RS00490
location: complement(115562..115789)
location: region:115562-115789:-1
so has part: feature:115562-115789:-1:exon

WP_033111498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115562-115789:-1:exon

DDA3937_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00495
old locus tag: Dda3937_01982
so part of: sequence
location: complement(115906..116178)
location: region:115906-116178:-1
so has part: feature:115906-116178:-1:exon
subclass of: SO_0000010

9731488
type: Gene
SIO_000068: ncbigene

position:115906:-1
position: 115906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116178:-1
position: 116178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115906-116178:-1:exon

DDA3937_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00495
old locus tag: Dda3937_01982
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.5 regulation; type of regulation; transcriptional level; action unknown
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942762.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MLSLHTAYDIQQNLKQHLKAMRKHRKLSVDALARQSGVPNSTIRKFEATGNISLRQFLMLYEVLGNLNDLNTLINQAHTPTSIEEVLKNA
SIO_010081: DDA3937_RS00495
subclass of: SO_0000673
so part of: DDA3937_RS00495
location: complement(115906..116178)
location: region:115906-116178:-1
so has part: feature:115906-116178:-1:exon

WP_013315808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115906-116178:-1:exon

DDA3937_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00500
old locus tag: Dda3937_01983
so part of: sequence
location: complement(116276..117709)
location: region:116276-117709:-1
so has part: feature:116276-117709:-1:exon
subclass of: SO_0000010

9731489
type: Gene
SIO_000068: ncbigene

position:116276:-1
position: 116276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117709:-1
position: 117709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116276-117709:-1:exon

DDA3937_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00500
old locus tag: Dda3937_01983
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019845340.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PLP-dependent aminotransferase family protein
translation: MPDTPRYRQIADHFIRAIQSGTLPAHHRLPSVRALAQQHGTSATTAMKVLRTLEDEHFALARSKSGFFVADTRRGNAMAPVPQPVALPVLDEQTELHLSLVGTECRVRLDLANGDNALYPLKKMGRLIRQASYTNPMMLGNDVKGSGYLPLKEEIARRALNYGCHLHPDDILITNGCIEALSLSLRAVTHSGDAVAVQSPCYFVLLQMLRNLGLRVVEVGQDASGHVDAEQLESLFSRRQVSAFISLTNINNPLGTSLPDTYKRRIAEAADRYGIALIEDDTFADTAFGEQRPFPLRAFSPNVLLCNGFSKTVGPGIRIGWVSGAHWQRKLAALKFTSTMGTSLTPQVALAELLRNGGYDAHLRKLRRELARQVARLRQAVLHYFPADTQVSQPEGGYAIWVTLPPGCCSSRELFSRARQEGIGIAPGHIFATDRRYDHCLRLNAGFGWNEEVHDAIRLLARWVLENRTERPSGLMT
SIO_010081: DDA3937_RS00500
subclass of: SO_0000673
so part of: DDA3937_RS00500
location: complement(116276..117709)
location: region:116276-117709:-1
so has part: feature:116276-117709:-1:exon

WP_033111499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116276-117709:-1:exon

DDA3937_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00505
old locus tag: Dda3937_01984
so part of: sequence
location: complement(117829..118200)
location: region:117829-118200:-1
so has part: feature:117829-118200:-1:exon
subclass of: SO_0000010

9731490
type: Gene
SIO_000068: ncbigene

position:117829:-1
position: 117829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118200:-1
position: 118200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117829-118200:-1:exon

DDA3937_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00505
old locus tag: Dda3937_01984
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019845341.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VOC family protein
translation: MTDAHYVLFYVDNPARSARFYSQLLELAPVEQSPTFAMFALKADLVLGLWSKHTVEPAVAQPGFSGELAFRLPDQAAVDACYARWTAQDVTVIQIPTTVDFGYTFTVQDPDGHRLRVFAYPNA
SIO_010081: DDA3937_RS00505
subclass of: SO_0000673
so part of: DDA3937_RS00505
location: complement(117829..118200)
location: region:117829-118200:-1
so has part: feature:117829-118200:-1:exon

WP_033111500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117829-118200:-1:exon

DDA3937_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00510
old locus tag: Dda3937_01985
so part of: sequence
location: complement(118322..119023)
location: region:118322-119023:-1
so has part: feature:118322-119023:-1:exon
subclass of: SO_0000010

9731491
type: Gene
SIO_000068: ncbigene

position:118322:-1
position: 118322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119023:-1
position: 119023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118322-119023:-1:exon

DDA3937_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00510
old locus tag: Dda3937_01985
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.5 regulation; type of regulation; transcriptional level; action unknown
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011095367.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YafY family protein
translation: MSRAQRLLALIQLLRSHRFAVPGPQLADKLGISLRTLYRDIATLQSQGAPIIGEAGLGYVLQPGFTLPPLMFTDEEIEALVLGSRWVARQADPRLQEGARNALMKIAAVLPEALRDTLDGTTLLVAPTNQTARDSVDLQPLRQAIRDGRKVTLHYQDGQGNTSTRLIWPFVLGYFEQVRVLGAWCETRQAFRHFRTDRILAFTVEADTYPVSRRRLFKQWREQQGIQLPKEGY
SIO_010081: DDA3937_RS00510
subclass of: SO_0000673
so part of: DDA3937_RS00510
location: complement(118322..119023)
location: region:118322-119023:-1
so has part: feature:118322-119023:-1:exon

WP_013315811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118322-119023:-1:exon

DDA3937_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00515
old locus tag: Dda3937_01986
so part of: sequence
location: 119187..120095
location: region:119187-120095:1
so has part: feature:119187-120095:1:exon
subclass of: SO_0000010

9731492
type: Gene
SIO_000068: ncbigene

position:119187:1
position: 119187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120095:1
position: 120095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119187-120095:1:exon

DDA3937_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00515
old locus tag: Dda3937_01986
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019845343.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EamA family transporter
translation: MTIKDQLLALCVVVVWGVNFVVMKIGLHDMPPFLLAGLRFLLVALPAVLLVPRPALPLRWLAAYGMTISFGQFAFLFCAIKMGMPVGMASLVIQSQAFFTLMLGAWWLGERLQWNQWLGILVAALGMVVLAEGNAANASLPGMTLTTLLLTLAAAASWACGNICNKQIMRHHPVNAMSLVVWSALIPVGPFLLCSWLFEGADTIVASLTSIRLPTVLALMYLSFISTLIGYAIWGNLLARYETWRVAPLSLLVPVVGILSAALLLGEHLSTGQLLGALLVMLGLLVNVFGARLWPLRSARQP
SIO_010081: DDA3937_RS00515
subclass of: SO_0000673
so part of: DDA3937_RS00515
location: 119187..120095
location: region:119187-120095:1
so has part: feature:119187-120095:1:exon

WP_033111501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119187-120095:1:exon

DDA3937_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: bcsO
locus tag: DDA3937_RS00520
old locus tag: Dda3937_01988
so part of: sequence
location: 120558..121163
location: region:120558-121163:1
so has part: feature:120558-121163:1:exon
subclass of: SO_0000010

9731494
type: Gene
SIO_000068: ncbigene

position:120558:1
position: 120558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121163:1
position: 121163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120558-121163:1:exon

DDA3937_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: bcsO
locus tag: DDA3937_RS00520
old locus tag: Dda3937_01988
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886657.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cellulose biosynthesis protein BcsO
translation: MKSYDDMQRFKDKAQIKDINFMDMSGQVLQSETVVWPIMKQLLRNQTGDDTLSGAQPVSIAQPVPVSQHVLSAPASPRRVTPSSSLNVNADPSGGNQHSLFNAIAASLPSAESVSAPAPQPIAPPTPVSQPQPAALTIETVPPATVRPHPLASAPAVSEASAASEAGRFRQLFSRHHHDEIHSVSKTMLLKPLLEKIALCR
SIO_010081: DDA3937_RS00520
subclass of: SO_0000673
so part of: DDA3937_RS00520
location: 120558..121163
location: region:120558-121163:1
so has part: feature:120558-121163:1:exon

WP_013315814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120558-121163:1:exon

DDA3937_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: bcsQ
locus tag: DDA3937_RS00525
old locus tag: Dda3937_01989
so part of: sequence
location: 121154..121969
location: region:121154-121969:1
so has part: feature:121154-121969:1:exon
subclass of: SO_0000010

9731495
type: Gene
SIO_000068: ncbigene

position:121154:1
position: 121154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121969:1
position: 121969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121154-121969:1:exon

DDA3937_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: bcsQ
locus tag: DDA3937_RS00525
old locus tag: Dda3937_01989
function: 5.1 cell processes; cell division
function: 7.2 location of gene products; periplasmic space
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848376.1
GO process: GO:0090540 - bacterial cellulose biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cellulose biosynthesis protein BcsQ
translation: MPLVCVCSPKGGVGKTTMAANLAYALARGGSKVLAIDFDMQNALRLHFGVPLGDERGYVAKSGETADWSQSILTTDDNIFVLPYGNVTEDQRLAFEHNLASDPLFLKRGLSTVMNYPGLVIVADFPPGPSPALKAMTDLADLHLVVMMADTASLSLMPHIEGNKLTGQALNRRKGSYLLLNQTDNRRAISSQVSSFVQQRMPDKLIGSVHRDESVAEANASQRSIFDFSPVSAAAFDIELIGKRVAALLDIRIGNGEVHAEFPAYQAVPAS
SIO_010081: DDA3937_RS00525
subclass of: SO_0000673
so part of: DDA3937_RS00525
location: 121154..121969
location: region:121154-121969:1
so has part: feature:121154-121969:1:exon

WP_013315815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121154-121969:1:exon

DDA3937_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: bcsA
locus tag: DDA3937_RS00530
old locus tag: Dda3937_01990
so part of: sequence
location: 122078..124168
location: region:122078-124168:1
so has part: feature:122078-124168:1:exon
subclass of: SO_0000010

9731496
type: Gene
SIO_000068: ncbigene

position:122078:1
position: 122078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124168:1
position: 124168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122078-124168:1:exon

DDA3937_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: bcsA
locus tag: DDA3937_RS00530
old locus tag: Dda3937_01990
function: 6.3 cell structure; surface antigens (ECA, O antigen of LPS)
function: 7.3 location of gene products; inner membrane
function: 6.1 cell structure; membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315816.1
GO function: GO:0016759 - cellulose synthase activity [Evidence IEA]; GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
GO process: GO:0030244 - cellulose biosynthetic process [Evidence IEA]; GO:0006011 - UDP-glucose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-forming cellulose synthase catalytic subunit
translation: MKKILFLTLLLLLLPVAAVIVITPMDSEKQYIFGLISLALMFLLGLSKRRQVTIILIVLSVLTSTRYIYWRATETLHFNSEIEAILGIGLFIAELYVWVILILGFLQTAWPLERVIEPMPEDTGLWPTVDVYIPTYNESLDVVRDTVLAAQCIDYPRDKMKIYLLDDGRRSEFAVFASQAGVGYITRDNNAHAKAGNLNHALKLTQGDLICVFDCDHVAKRIFLQATVGPFLSDPKLALLQTPHYFYSPDPFERNLRAARDMPNEGALFYGPVQQGNDLWNAAFFCGSCAVIRRAALDEIGGFAVETVTEDAHTAIKMQRKGWKSAFLSIPLAAGLATERLVLHVIQRTRWARGMTQIFRVDNPLLGRGLTWQQRLCYLNAMLHFQFGLPRVVFLTAPLAYLLFNLNIIHASAAMIFAYALPHLVVSMYLNSRMNGRFRYSFWGEIYETVMAFHLVIPTLVTLFSPTRGKFNVTDKGGLLDEGFFDFRIVRPHIVAAILLGAGVLAGITRIVAHDYFNVDPYVIVLNVVWALLSLLTLLAAIAVARETKQVRKTIRVDVDVPAIIHYASGIASRATTINLSMGGVQLKAPDQRHKSDEIEAVELLLQSSEICLPVQLVAADDDIIRLQFVDIPLAQRRALVRVVLSRADAWMNPPWPQDRPLRSLWAVVRTVCAFFWMSLRGRGRKADLKKEDVAA
SIO_010081: DDA3937_RS00530
subclass of: SO_0000673
so part of: DDA3937_RS00530
location: 122078..124168
location: region:122078-124168:1
so has part: feature:122078-124168:1:exon

WP_013315816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122078-124168:1:exon

DDA3937_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: bcsB
locus tag: DDA3937_RS00535
old locus tag: Dda3937_01991
so part of: sequence
location: 124165..126678
location: region:124165-126678:1
so has part: feature:124165-126678:1:exon
subclass of: SO_0000010

9731497
type: Gene
SIO_000068: ncbigene

position:124165:1
position: 124165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126678:1
position: 126678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124165-126678:1:exon

DDA3937_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: bcsB
locus tag: DDA3937_RS00535
old locus tag: Dda3937_01991
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848374.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB
translation: MMTPRFMKALLSLCVGSVLTLGGNGALAAGDAADEPLPAMLSPGGGNPQPAATEPAPVTDSAPALAPAPTTALPTMPPITSPLISPETPSADVPPPPSLTTPSMLLPAPVGDQTAAGYQPLSSSVSVAQMGQTHGITLAGGQAQAGVIFTLPGDQVVTNARLDLALRVSPELAALNTSMQLMLNGQPLGTVPLNAATGDSTLFQLDIPAAMVVSSNNLSFRINDADRLLCERDSATRYNLTILPTTTLNLEGQQLDIGTRLENFPRPFIDPLQMTPATVPMVFPADVTPEQVGAASLVASWLGMRMDGYGVTFPVIRDALPEKSGMVFGRPGDKVGTLTLPEVAGPTLQLIDNPVNPVYKLMLVVGKDDEQLRQAAYRLVSQPLTGDASTLSVAQQTIPFRRAYDAPRWISTDRPVRLSELLRNDQSMTVSGLWHEALRINFRAAPDLFLWDGDTIPVKVDYRFPSESWIDESRSYLNVMLNGTFLRNLTVNKVGVLQQLWREMGGDTRQENYTLKVDPYLIYGYNQFQLYFNIRAKDDAPCSVLLNNNIKSQIADSASIDLSRTRHFTLLPNLSYFVGVAFPFTRQADYAQTVMLLPEKPTNAEIGLLLDLAGRASDATGVSLNHNRVMFGLPTNAADRQKLENSDVLAVTTLPQAAFNQHLLSGSPYTVNDRTFGVKEPGAWERARTLLTGDWDRTPLDADRYFSSNEAWRGFLSYRSPWNPERVVVVATGSGDEQLLRLYDDLNSPNINAAVRGDTAIITDENGVRSFRVGPQFPSGEMPWYMMIVWYANQHSVLLALAALLLAAAVGLSLASILRRLAEKRLSTRRDAGSDKK
SIO_010081: DDA3937_RS00535
subclass of: SO_0000673
so part of: DDA3937_RS00535
location: 124165..126678
location: region:124165-126678:1
so has part: feature:124165-126678:1:exon

WP_033111502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124165-126678:1:exon

DDA3937_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00540
old locus tag: Dda3937_01992
so part of: sequence
location: 126690..130586
location: region:126690-130586:1
so has part: feature:126690-130586:1:exon
subclass of: SO_0000010

9731498
type: Gene
SIO_000068: ncbigene

position:126690:1
position: 126690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130586:1
position: 130586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126690-130586:1:exon

DDA3937_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00540
old locus tag: Dda3937_01992
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 1.6 metabolism; macromolecules (cellular constituent) biosynthesis
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848373.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO process: GO:0030244 - cellulose biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cellulose biosynthesis protein BcsC
translation: MKMTTLTARIRRSLSLTGVVVGGVLSASALAAQANPALQALFEQADYWHQRSHDDLARDALQKILRVDADNPRALYLMALYAQNSGDGAEAAKWRERLSKASPQDPLLQALDNARQAATIPQAQLALARQQARSGNISAALQTWRNLFSGSQPPASIAAEYYLTMAGDRTLLPQAIDHLREFAAAHPQDTNAAVALGKALTYQEPTRREGVQILSGLASGSADADQAMRQALLWLGPKADDAPFYQLYQQRHPQDTAVMDYYRKNVGGSEKDKGFTALNSGDLSNAQTAFSQVLQANPEDADALAGMGYAAQRRGDFAAAASYLERAARQGGENSAQRQQQADDARFYAQLANAQQAMKNGDTAQALTLSEPLAQAGGDKGLTAKLFRADVLRRTNNFPQAERLYRDVLQTDADNRNAKEGLYYVLREQNRADEANTLFAALPENVRRSMAPRPVATSAPVRNEAKQALAAGDTVRAIGLLQQGIQRFPNDGWLKLDLARIYQQQGNMAAATSLMQPLFRAGAGADDLYAAALFASENNAWQQASTLLSRIPPRNQNEDTRSLARRVNFNLQMATAQVYLSRGENAAAANTLRALSVTPPDNPADAGKLAKSLAAAGDTAAAVAVVRNNMQRGVQGNAGDYADQVGVLNQAGLSDEAQSWLSRPELVARSSATQLDGLRTGFVVREADRLRENQQYAQAYDKLARALQRDPKNTDLMFAMARLYQSGKMNKEAADVYDYLLSHDTPTQEARVGAINVALERHDANKAHALSTGLQGEQTPERLLLLARIADAEGNRDQAMAYLKTARSKAVGLEGAAPGAAPAIGGLAMTDNPFIDRSTPTATRVASSSSSYGSVMPWQQRNGVATGDTAAGATTQQQAATLTQINGMMADLERDTGGWVQTGVQIRARDGESGLSRLTEAKVPLTWSSGSFGDARINFSVTPMTLSAGTSSGDSNRQFGTGALAQVVNASAQTLVNELGRNFNFSSLSSAQVLNILQNSTNKPNIDQVTVDSQGKQNASGAELNLSLISKNYKLDLGSTPLGQDLNTLVGGIQWSPKLTDFLTLVVTGERRAVTDSLLSYVGAKDALTGKRWGQVTKNGGNVLLSYDNGDIGFYGGGGAYSYLGENVKNNTGVMANAGAYIRPFHDRDRELKTGVSLSWMNFSQNLGYYSYGQGGYFSPQDYVSVSLPVEWSQKYDDLSVKAGVAVGYQSYSRDRSAYFPNNPDWQTLLESAESLGLAKESHYAGDSKSGIGYNVHVGADYRVTKDVTVGGQMGYDTFGNYNETTARLYFRYGLGGK
SIO_010081: DDA3937_RS00540
subclass of: SO_0000673
so part of: DDA3937_RS00540
location: 126690..130586
location: region:126690-130586:1
so has part: feature:126690-130586:1:exon

WP_013315818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126690-130586:1:exon

DDA3937_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: bcsD
locus tag: DDA3937_RS00545
old locus tag: Dda3937_01993
so part of: sequence
location: 130589..131056
location: region:130589-131056:1
so has part: feature:130589-131056:1:exon
subclass of: SO_0000010

9731499
type: Gene
SIO_000068: ncbigene

position:130589:1
position: 130589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131056:1
position: 131056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130589-131056:1:exon

DDA3937_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: bcsD
locus tag: DDA3937_RS00545
old locus tag: Dda3937_01993
function: 7.1 location of gene products; cytoplasm
function: 1.6 metabolism; macromolecules (cellular constituent) biosynthesis
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886652.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cellulose biosynthesis protein BcsD
translation: MSDLQQHALNYYRQQQLPSGWADLFGVIVNGMMDNAGEREGLAFLRHIGGQLAERYPLPAAVTVVDLEREINRVLSLFHWGCVDLRPYENRLEIYHLALPASVNSSGSVRWRMAMAAVLQGLYSRWLREQGGVESVPLSCEETDSESTLLFRYQH
SIO_010081: DDA3937_RS00545
subclass of: SO_0000673
so part of: DDA3937_RS00545
location: 130589..131056
location: region:130589-131056:1
so has part: feature:130589-131056:1:exon

WP_013315819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130589-131056:1:exon

DDA3937_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00550
old locus tag: Dda3937_01994
so part of: sequence
location: 131069..132067
location: region:131069-132067:1
so has part: feature:131069-132067:1:exon
subclass of: SO_0000010

9731500
type: Gene
SIO_000068: ncbigene

position:131069:1
position: 131069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132067:1
position: 132067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131069-132067:1:exon

DDA3937_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00550
old locus tag: Dda3937_01994
function: 7.5 location of gene products; extracellular
function: 1.1.1 metabolism; carbon utilization; carbon compounds
function: 1.2.4 metabolism; macromolecule degradation; polysaccharides
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886651.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyl hydrolase family 8
translation: MGKPMWRCWALMLMVWFSASATAANGWEIYKSRFMTTDGRIQDTGNKNVSHTEGQGFAMLMAVHYDDRIAFDNLWNWTQSHLRNTTSGLFYWRYDPSAANPVVDKNNASDGDVLIAWALLKAGNKWQDNRYLQASDSIQKAIIASNIIQFAGRTVMLPGAYGFNKNSYVILNPSYFLFPAWRDFANRSHLQVWRQLIDDSLSLVGEMRFGQVGLPTDWAALNADGSMAPATAWPSRFSYDAIRIPLYLYWYDAKTTALVPFQLYWRNYPRLTTPAWVDVLSSNTATYNMQGGLLAVRDLTMGNLDGLSDLPGASEDYYSSSLRLLVMLARGK
SIO_010081: DDA3937_RS00550
subclass of: SO_0000673
so part of: DDA3937_RS00550
location: 131069..132067
location: region:131069-132067:1
so has part: feature:131069-132067:1:exon

WP_013315820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131069-132067:1:exon

DDA3937_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00555
old locus tag: Dda3937_01995
so part of: sequence
location: 132468..133754
location: region:132468-133754:1
so has part: feature:132468-133754:1:exon
subclass of: SO_0000010

9731501
type: Gene
SIO_000068: ncbigene

position:132468:1
position: 132468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133754:1
position: 133754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132468-133754:1:exon

DDA3937_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00555
old locus tag: Dda3937_01995
function: 1.1.1 metabolism; carbon utilization; carbon compounds
function: 4.2.A.23 transport; Electrochemical potential driven transporters; Porters (Uni-, Sym- and Antiporters); The Dicarboxylate/Amino Acid:Cation (Na+ or H+) Symporter (DAACS) Family
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 4.S.134 transport; substrate; Na+/dicarboxylate
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315821.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dicarboxylate/amino acid:cation symporter
translation: MKKSIFKSLYFQVLAAITIGILLGHFYPALGQQMQPLGDGFVKLIKMVIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEVVSTLALIIGLVVVNVLQPGAGMNVDPAALNVAAVANYATEAGKQGVVPFLMDVIPSSVIGAFASGNILQVLLFAVMFGFALHRLGDKGVLIFDVIESFSKVIFGIINMIMRLAPLGAFGAMAFTIGKYGVGTLVQLGQLIICFYITCILFVVLVLGSIARATGFSIFKFIRYIREELLIVLGTSSSESALPRMLEKMEKLGCKKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSHMDIWHQITLLVVLLLSSKGAAGVTGSGFIVLAATISAVGHLPLAGLALILGIDRFMSEARALTNLVGNGVATVVVAKWCKQLDSKQMNDVLSGRNDGPAAESRPS
SIO_010081: DDA3937_RS00555
subclass of: SO_0000673
so part of: DDA3937_RS00555
location: 132468..133754
location: region:132468-133754:1
so has part: feature:132468-133754:1:exon

WP_013315821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132468-133754:1:exon

DDA3937_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00560
old locus tag: Dda3937_01996
so part of: sequence
location: 134031..135494
location: region:134031-135494:1
so has part: feature:134031-135494:1:exon
subclass of: SO_0000010

9731502
type: Gene
SIO_000068: ncbigene

position:134031:1
position: 134031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135494:1
position: 135494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134031-135494:1:exon

DDA3937_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00560
old locus tag: Dda3937_01996
function: 1.2.3 metabolism; macromolecule degradation; proteins/peptides/glycopeptides
function: 7.2 location of gene products; periplasmic space
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848369.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pitrilysin family protein
translation: MQGTKFGLFVGGVLLATAVGNVQAEALQPDPAWQQGKLDNGFSWQLLATPQRPSDRIELRLMINTGSLTENAQQTGFSHFIPRLALLPRDTFSAGQLPSLWQQSESETRPLPPATTSYDFTSYNLSLPNNRPDLLKDALSWLADTAGQLQINDKRIASAMKMIDPVATAPTNPQDPSWRYRLKGSSLLSYAPGQPLKASVNAEQLSKYYKTWYTPDAMTLYVVGNVDSRAIAEQIDRVFSPLQGKRVTPSPLPTLSAMPSTPISLMDSSVKQDILSLVWDMPWQPIRDSQALARYWHSDLAREALFWHMQQVLTKSPLKDTNVRFDCNVVYGRAQCAIHLDNVNVTSESAQAGVTFLSKELLALRDKGLSQAEFDALMARKTEELSKLFATYARASTDILMDQRLRSQKNGVVDIAPEQYQKLRQNYLSSVTLEMLNQELHQQLSQEATLVMLQPQGEPEANMKALRETYMSIMQPDNGAASAAPAQ
SIO_010081: DDA3937_RS00560
subclass of: SO_0000673
so part of: DDA3937_RS00560
location: 134031..135494
location: region:134031-135494:1
so has part: feature:134031-135494:1:exon

WP_013315822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134031-135494:1:exon

DDA3937_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rhuM
locus tag: DDA3937_RS00565
old locus tag: Dda3937_01997
so part of: sequence
location: complement(135723..136748)
location: region:135723-136748:-1
so has part: feature:135723-136748:-1:exon
subclass of: SO_0000010

9731503
type: Gene
SIO_000068: ncbigene

position:135723:-1
position: 135723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136748:-1
position: 136748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135723-136748:-1:exon

DDA3937_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rhuM
locus tag: DDA3937_RS00565
old locus tag: Dda3937_01997
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012368586.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RhuM family protein
translation: MADNTPQAPQGEFVLFTSADGQTRVECRFESDTLWLSQAMIAELYGKAKATISEHIKNIFTEGELDENSVVRLYRTTAADGKSYNVQYFSLPLVLAVGYRVRSSRGTQFRQWATQTLQEYLIKGFVMDDERLKNPPVGHSAVPDYFDEMLERIRDIRASERRVYLRVKEIFTMAADYEPSNQETNRFFQTIQNKLHYACTHMTAAELIASRVDASKPDMGLTSYKGDEVRKTDVTIAKNYLREDEIKELNRIVNMWLDFAEDQALRRKQVFLQDWADKLDQFLSFNDRDVLSGAGKISKKDADDKAKVEFERFAAQRRRLKEAEGAQANIAALKAILKKDK
SIO_010081: DDA3937_RS00565
subclass of: SO_0000673
so part of: DDA3937_RS00565
location: complement(135723..136748)
location: region:135723-136748:-1
so has part: feature:135723-136748:-1:exon

WP_013315823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135723-136748:-1:exon

DDA3937_RS23765
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23765
so part of: sequence
location: complement(136767..136889)
location: region:136767-136889:-1
so has part: feature:136767-136889:-1:exon
subclass of: SO_0000010

77100064
type: Gene
SIO_000068: ncbigene

position:136767:-1
position: 136767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136889:-1
position: 136889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136767-136889:-1:exon

DDA3937_RS23765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23765
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQALLKEGDIARTLLKDPQVMASYVELIFDMMKQRSRATQ
SIO_010081: DDA3937_RS23765
subclass of: SO_0000673
so part of: DDA3937_RS23765
location: complement(136767..136889)
location: region:136767-136889:-1
so has part: feature:136767-136889:-1:exon

WP_269077959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136767-136889:-1:exon

DDA3937_RS21740
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS21740
old locus tag: Dda3937_01999
so part of: sequence
location: complement(136931..137359)
location: region:136931-137359:-1
so has part: feature:136931-137359:-1:exon
subclass of: SO_0000010

30316554
type: Gene
SIO_000068: ncbigene

position:136931:-1
position: 136931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137359:-1
position: 137359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136931-137359:-1:exon

DDA3937_RS21740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS21740
old locus tag: Dda3937_01999
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: protein motif:HMM:NF023583.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction-modification system subunit M N-terminal domain-containing protein
translation: MNLQDKEQSAKLSSAIWRMADDLWGDFKHTDFARIILPFLLLRRIECVLEPTREEVRKFYLAEKQSGIDLGLVLPEVARFSFYNTSEYSLETLGASDTGDNLELYISQWAMNLAVVTLPMAPLPVLPKTRLWLNRLKNMIRR
SIO_010081: DDA3937_RS21740
subclass of: SO_0000673
so part of: DDA3937_RS21740
location: complement(136931..137359)
location: region:136931-137359:-1
so has part: feature:136931-137359:-1:exon

WP_013315825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136931-137359:-1:exon

DDA3937_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00575
old locus tag: Dda3937_02000
so part of: sequence
location: complement(137428..137928)
location: region:137428-137928:-1
so has part: feature:137428-137928:-1:exon
subclass of: SO_0000010

9731506
type: Gene
SIO_000068: ncbigene

position:137428:-1
position: 137428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137928:-1
position: 137928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137428-137928:-1:exon

DDA3937_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00575
old locus tag: Dda3937_02000
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000648433.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MKVTKLDNQLLEKATDIFAKLGLPIEQAINVFLAKSVQAKGFPFSVALESESQPEGSSQSKITNAEITEVIHDLVENTLPLSEIENLTQLTYCRNTFGLSFPVLKLAKSPRPEDIRSAAKDAKERNRYSTTRVAQRADKTYVICTQWTDRHRNAFCRWQGIFSHNE
SIO_010081: DDA3937_RS00575
subclass of: SO_0000673
so part of: DDA3937_RS00575
location: complement(137428..137928)
location: region:137428-137928:-1
so has part: feature:137428-137928:-1:exon

WP_013315826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137428-137928:-1:exon

DDA3937_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: kdgK
locus tag: DDA3937_RS00580
old locus tag: Dda3937_02001
so part of: sequence
location: complement(138241..139173)
location: region:138241-139173:-1
so has part: feature:138241-139173:-1:exon
subclass of: SO_0000010

9731507
type: Gene
SIO_000068: ncbigene

position:138241:-1
position: 138241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139173:-1
position: 139173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138241-139173:-1:exon

DDA3937_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: kdgK
locus tag: DDA3937_RS00580
old locus tag: Dda3937_02001
EC number: 2.7.1.45
function: 1.1.1 metabolism; carbon utilization; carbon compounds
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315827.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-dehydro-3-deoxygluconokinase
translation: MTTKNIAIIGECMIELSQKGADLNRGFGGDTLNTAVYISRQVKPDALDVHYVTALGTDSFSSEMMASWQKEGVKTDLIQRLDNKLPGLYFIETDATGERTFYYWRNDAAARYWLESPDADTISQQLAQFDYIYLSGISLAILNQASRARLLTVLRACRANGGKVIFDNNYRPRLWQSKEETRQAYSDMLACTDIAFLTLDDEDMLWGELPVDEVLKRTHGAGVMEVVIKRGADACLVSIQGEALLEVPAIKLPKEKVVDTTAAGDSFSAGYLSVRLNGGSAQDAAKRGHLTASTVIQYRGAIIPLEAMPA
SIO_010081: DDA3937_RS00580
subclass of: SO_0000673
so part of: DDA3937_RS00580
location: complement(138241..139173)
location: region:138241-139173:-1
so has part: feature:138241-139173:-1:exon

WP_013315827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138241-139173:-1:exon

DDA3937_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00585
old locus tag: Dda3937_02002
so part of: sequence
location: complement(139357..139560)
location: region:139357-139560:-1
so has part: feature:139357-139560:-1:exon
subclass of: SO_0000010

9731509
type: Gene
SIO_000068: ncbigene

position:139357:-1
position: 139357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139560:-1
position: 139560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139357-139560:-1:exon

DDA3937_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00585
old locus tag: Dda3937_02002
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315829.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-oxalocrotonate tautomerase family protein
translation: MPFVNIRITKDGVTAEQKKQLIAGVTQLLVDTLGKNPATTVVIIDEVETDNWGIGGESVTERRQQAS
SIO_010081: DDA3937_RS00585
subclass of: SO_0000673
so part of: DDA3937_RS00585
location: complement(139357..139560)
location: region:139357-139560:-1
so has part: feature:139357-139560:-1:exon

WP_013315829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139357-139560:-1:exon

DDA3937_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: yhjD
locus tag: DDA3937_RS00590
old locus tag: Dda3937_02003
so part of: sequence
location: complement(139606..140592)
location: region:139606-140592:-1
so has part: feature:139606-140592:-1:exon
subclass of: SO_0000010

9731510
type: Gene
SIO_000068: ncbigene

position:139606:-1
position: 139606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140592:-1
position: 140592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139606-140592:-1:exon

DDA3937_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: yhjD
locus tag: DDA3937_RS00590
old locus tag: Dda3937_02003
function: 0.1 unknown function; conserved hypothetical product
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inner membrane protein YhjD
translation: MPVKPNQPRPSTKQDPSSGASRQRFGYVTGWLHRIRSVPAIAHFIRAGDRFNDRMGNQFGAAITYFSFLSLIPILMVSFATAGFVLASNPDLLTGLINRIVNSISDPSLARTLKNTVNTAVRQRTTVGLTGLLIALYSGVNWIGNLREAIHAQSRDVWERQPHEEEKIYLRYLWDFLSLIGLLLALVITLFLTSVAGSAQATIVRALGLNGIDWLRPVMTLIALSISIFANYLLFLWILWVLPRHNPRRGPLLRGTLMAAIGFEALKFAMTVALPELATSPSGAAFGSVIGLMTFFYFFARLTLFCAAWIATADPKTDINTQAPLPGA
SIO_010081: DDA3937_RS00590
subclass of: SO_0000673
so part of: DDA3937_RS00590
location: complement(139606..140592)
location: region:139606-140592:-1
so has part: feature:139606-140592:-1:exon

WP_013315830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139606-140592:-1:exon

DDA3937_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00595
old locus tag: Dda3937_02004
so part of: sequence
location: 140798..142021
location: region:140798-142021:1
so has part: feature:140798-142021:1:exon
subclass of: SO_0000010

9731511
type: Gene
SIO_000068: ncbigene

position:140798:1
position: 140798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142021:1
position: 142021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140798-142021:1:exon

DDA3937_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00595
old locus tag: Dda3937_02004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886645.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MPVSTPPVSTPPKPSPGGLRLNLRIMSVVMFNFASYLNIGLPLAVLPGYVHEHLGFSAFWAGLVISLQYFSTLLSRPRAGRHADEKGPKQVVVFGLSGVLLSGVFYALAAWNDGSPVLALALLCVGRLVLGIGQSFAGTGATLWGVGVVGSLHIGRVISWNGVATYGAMAIGAPLGVWIYHLGGLRLLAIVIVLVAGAAILLALPRPAVTVTPGKKLPFREVLGKVWLYGVILSLASAGFGVISTFITLFYASRQWDGAALTLSLFSCAFVGTRLLFPNVINRFGGLRVALACFLVESAGLLLVWLASHPLMAEAGAFFAGAGFSLVFPALGVVAVKAVSAQNQGSALATYTIFLDLSLGVVGPAAGVMMAYTDIDAIYLAAAGLALVGLLLTVRLYQRGGRDAKAV
SIO_010081: DDA3937_RS00595
subclass of: SO_0000673
so part of: DDA3937_RS00595
location: 140798..142021
location: region:140798-142021:1
so has part: feature:140798-142021:1:exon

WP_033111503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140798-142021:1:exon

DDA3937_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00600
old locus tag: Dda3937_02005
so part of: sequence
location: complement(142077..142640)
location: region:142077-142640:-1
so has part: feature:142077-142640:-1:exon
subclass of: SO_0000010

9731512
type: Gene
SIO_000068: ncbigene

position:142077:-1
position: 142077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142640:-1
position: 142640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142077-142640:-1:exon

DDA3937_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00600
old locus tag: Dda3937_02005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019845358.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DcrB family lipoprotein
translation: MPNLAKYIGIGLLAATLAACDGNSDKKTSAPAASPAAEKTTAQNVSLLSGKLTFTLPDGLSDQSGKLGNQNNNMHVYADQSGQKAIIVIVGDDTPLDLPALGQRLEQQQRGRDANLQVLGNKTAEINGHQIQQLDSVLTSNGQKAFSSIVLAKADSRLLTLQITLPADNLQQAQADAGKIINTLKLN
SIO_010081: DDA3937_RS00600
subclass of: SO_0000673
so part of: DDA3937_RS00600
location: complement(142077..142640)
location: region:142077-142640:-1
so has part: feature:142077-142640:-1:exon

WP_033111504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142077-142640:-1:exon

DDA3937_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00605
old locus tag: Dda3937_02006
so part of: sequence
location: complement(142826..143497)
location: region:142826-143497:-1
so has part: feature:142826-143497:-1:exon
subclass of: SO_0000010

9731513
type: Gene
SIO_000068: ncbigene

position:142826:-1
position: 142826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143497:-1
position: 143497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142826-143497:-1:exon

DDA3937_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00605
old locus tag: Dda3937_02006
function: 0.1 unknown function; conserved hypothetical product
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019845359.1
GO process: GO:1990397 - queuosine salvage [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter
translation: MFQFSAQQRLTALCWLSLFHILVIISSNYLVQLPITLFGFHTTWGAFTFPFIFLASDLTVRIFGAPLARRIILTVMVPALVASYLVSSLFYKGEWQGFSALSQVNPMVARIAAASLMAYLLGQILDVQVFNRLRRLKAWWVAPAASAVLGNLSDTVAFFFIAFYRSTDPFMATHWMEIATVDYFFKIAINLIFFLPMYGVLLNMVLRRLSQPGSNAPYQDQTA
SIO_010081: DDA3937_RS00605
subclass of: SO_0000673
so part of: DDA3937_RS00605
location: complement(142826..143497)
location: region:142826-143497:-1
so has part: feature:142826-143497:-1:exon

WP_013315833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142826-143497:-1:exon

DDA3937_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: tusA
locus tag: DDA3937_RS00610
old locus tag: Dda3937_02007
so part of: sequence
location: 144107..144352
location: region:144107-144352:1
so has part: feature:144107-144352:1:exon
subclass of: SO_0000010

9731514
type: Gene
SIO_000068: ncbigene

position:144107:1
position: 144107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144352:1
position: 144352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144107-144352:1:exon

DDA3937_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: tusA
locus tag: DDA3937_RS00610
old locus tag: Dda3937_02007
EC number: 2.8.1.-
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315834.1
GO function: GO:0097163 - sulfur carrier activity [Evidence IEA]
GO process: GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase TusA
translation: MTDIFANPDRTLDAQGLRCPEPVMMVRKTVRQMDAGQTLLILADDPATTRDIPGFCRYMEHELLAQMTEQLPYRYLLRKGA
SIO_010081: DDA3937_RS00610
subclass of: SO_0000673
so part of: DDA3937_RS00610
location: 144107..144352
location: region:144107-144352:1
so has part: feature:144107-144352:1:exon

WP_013315834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144107-144352:1:exon

DDA3937_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00615
old locus tag: Dda3937_02008
so part of: sequence
location: complement(144435..145064)
location: region:144435-145064:-1
so has part: feature:144435-145064:-1:exon
subclass of: SO_0000010

9731515
type: Gene
SIO_000068: ncbigene

position:144435:-1
position: 144435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145064:-1
position: 145064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144435-145064:-1:exon

DDA3937_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00615
old locus tag: Dda3937_02008
function: 0.1 unknown function; conserved hypothetical product
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211498.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysoplasmalogenase
translation: MLWSFIAVFFSGWLYVDASYRGPVWQRWLFKPVTLLLMMLMVWQTPMLGIPGYLVVLGLAATLIGDALMQLSGDRLRFALSTYLASHLLYTISFFASRPSLGFFWPLPLTLLILSALLLALLWSRLEAERLTVTALVLVTAFMAWVAGEHYFALGNESNFSLLLGTLLLFAGHAIWLVNHFRVNFRAHQALVAICYFGGHFLIVRSLYV
SIO_010081: DDA3937_RS00615
subclass of: SO_0000673
so part of: DDA3937_RS00615
location: complement(144435..145064)
location: region:144435-145064:-1
so has part: feature:144435-145064:-1:exon

WP_013315835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144435-145064:-1:exon

DDA3937_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00620
old locus tag: Dda3937_02009
so part of: sequence
location: 145336..145662
location: region:145336-145662:1
so has part: feature:145336-145662:1:exon
subclass of: SO_0000010

9731516
type: Gene
SIO_000068: ncbigene

position:145336:1
position: 145336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145662:1
position: 145662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145336-145662:1:exon

DDA3937_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00620
old locus tag: Dda3937_02009
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011095813.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1820 family protein
translation: MSNEPVLYRIQFINNGKNYQLYVRELVQSNLFGFIEIADFVFDNPSTVLVDPTTEKLKTEFAGVDRSYIPLQAVIRIDAVTGRERDSARISELGDNVTHFPSLPGKKP
SIO_010081: DDA3937_RS00620
subclass of: SO_0000673
so part of: DDA3937_RS00620
location: 145336..145662
location: region:145336-145662:1
so has part: feature:145336-145662:1:exon

WP_013315836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145336-145662:1:exon

DDA3937_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00625
old locus tag: Dda3937_02010
so part of: sequence
location: complement(145723..146004)
location: region:145723-146004:-1
so has part: feature:145723-146004:-1:exon
subclass of: SO_0000010

9731517
type: Gene
SIO_000068: ncbigene

position:145723:-1
position: 145723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146004:-1
position: 146004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145723-146004:-1:exon

DDA3937_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00625
old locus tag: Dda3937_02010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1145 family protein
translation: MWINLGRLLMLGIWGFLVMNLIHPFPRPLNIFMILAMGFMLLMHGVQFLLLKASQPKDAPPLSGLLQLRIFLFGVFELLDWQRKQPAPPRKRR
SIO_010081: DDA3937_RS00625
subclass of: SO_0000673
so part of: DDA3937_RS00625
location: complement(145723..146004)
location: region:145723-146004:-1
so has part: feature:145723-146004:-1:exon

WP_033112182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145723-146004:-1:exon

DDA3937_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rsmD
locus tag: DDA3937_RS00630
old locus tag: Dda3937_02011
so part of: sequence
location: complement(145994..146617)
location: region:145994-146617:-1
so has part: feature:145994-146617:-1:exon
subclass of: SO_0000010

9731518
type: Gene
SIO_000068: ncbigene

position:145994:-1
position: 145994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146617:-1
position: 146617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145994-146617:-1:exon

DDA3937_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rsmD
locus tag: DDA3937_RS00630
old locus tag: Dda3937_02011
EC number: 2.1.1.171
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942783.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (guanine(966)-N(2))-methyltransferase
translation: MVKHQATSAPGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIQQSRCLDCFAGSGALGLEALSRYAAHATLLEAERNVARQLTQNLSLLRADNAEVVNADTLQWLAKPASAQPYDVVFLDPPFRRGLLDDTLRLLETGGWLAQETWIYIETEAENRTLAIPPTWTLHREKTAGQVSYRLYIRHASDAASGGNDEHLD
SIO_010081: DDA3937_RS00630
subclass of: SO_0000673
so part of: DDA3937_RS00630
location: complement(145994..146617)
location: region:145994-146617:-1
so has part: feature:145994-146617:-1:exon

WP_013315838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145994-146617:-1:exon

DDA3937_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ftsY
locus tag: DDA3937_RS00635
old locus tag: Dda3937_02012
so part of: sequence
location: 146929..148269
location: region:146929-148269:1
so has part: feature:146929-148269:1:exon
subclass of: SO_0000010

9731519
type: Gene
SIO_000068: ncbigene

position:146929:1
position: 146929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148269:1
position: 148269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146929-148269:1:exon

DDA3937_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ftsY
locus tag: DDA3937_RS00635
old locus tag: Dda3937_02012
function: 5.1 cell processes; cell division
function: 4.3.A.5 transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The Type II (General) Secretory Pathway (IISP) Family
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848357.1
GO function: GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal recognition particle-docking protein FtsY
translation: MAKEKKRGFFSWLGLGRQDEDKTEQPQPAPEAPQADDATPAAPEPAQNTSDEAPEQPAPNNTALAETGETPAPESQPTETAAEIPPTPVEPPETVALVAEPTADAEPQTDTVAEDGVEPEPETVIVPAAPVVSQEQERPTKEGFFARLKRSLVKTRQNLGSGFVGLFRGKKIDDDLFDELEEQLLIADVGVETTRKIIDRLTEHASRKQLKDAEALIALLKAEMSDILAKVDAPLDIDSKTPFVILMVGVNGVGKTTTIGKLARQYQAQGKSVMLAAGDTFRAAAVEQLQVWGQRNNVPVVAQHTGADSASVIFDALQAARARGVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDENAPHEVMLTLDASTGQNAVSQAKLFNETVGLSGITLTKLDGTAKGGVIFAIADQFGIPIRYIGVGESIDDLRPFKADDFIEALFARED
SIO_010081: DDA3937_RS00635
subclass of: SO_0000673
so part of: DDA3937_RS00635
location: 146929..148269
location: region:146929-148269:1
so has part: feature:146929-148269:1:exon

WP_013315839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146929-148269:1:exon

DDA3937_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ftsE
locus tag: DDA3937_RS00640
old locus tag: Dda3937_02013
so part of: sequence
location: 148275..148943
location: region:148275-148943:1
so has part: feature:148275-148943:1:exon
subclass of: SO_0000010

9731520
type: Gene
SIO_000068: ncbigene

position:148275:1
position: 148275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148943:1
position: 148943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148275-148943:1:exon

DDA3937_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ftsE
locus tag: DDA3937_RS00640
old locus tag: Dda3937_02013
function: 5.1 cell processes; cell division
function: 4.3.A.1.a transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP binding cytoplasmic component
function: 7.1 location of gene products; cytoplasm
function: 4.3.A.5 transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The Type II (General) Secretory Pathway (IISP) Family
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019080173.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division ATP-binding protein FtsE
translation: MIRFEQVSKAYLGGRQALQGVDFHIRPAEMVFLTGHSGAGKSTLLKLICGIERPSAGHILFGGHDISRLKKSEVPFLRRQIGMIFQDHHLLMDRTVYENVAMPLIIAGASAEDIRRRVSAALDKVGLLDKARSYPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDEALSEGILRLFEEFNRVGVTVLMATHDTGLIARRHYRVLTLSQGRMLGGHDGE
SIO_010081: DDA3937_RS00640
subclass of: SO_0000673
so part of: DDA3937_RS00640
location: 148275..148943
location: region:148275-148943:1
so has part: feature:148275-148943:1:exon

WP_013315840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148275-148943:1:exon

DDA3937_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ftsX
locus tag: DDA3937_RS00645
old locus tag: Dda3937_02014
so part of: sequence
location: 148933..149904
location: region:148933-149904:1
so has part: feature:148933-149904:1:exon
subclass of: SO_0000010

9731521
type: Gene
SIO_000068: ncbigene

position:148933:1
position: 148933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149904:1
position: 149904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148933-149904:1:exon

DDA3937_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ftsX
locus tag: DDA3937_RS00645
old locus tag: Dda3937_02014
function: 7.3 location of gene products; inner membrane
function: 5.1 cell processes; cell division
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 6.1 cell structure; membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005176360.1
GO process: GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: permease-like cell division protein FtsX
translation: MANNTRAQRAGSKTKTRSLQGGWQEQWRYAWANTLRDMLRQPLATLLTIMVIAISLTLPSICYLVWKNVSQAASQWYPTPQLTVYLDKSLDDNAAEAVIGKIKAEEGVDKVNYLSRNEAMGEFRNWSGFGGALDMLEENPLPAVAVVSPKLGFQNNQTLNTLRDRIAAVQGVDEVRMDDSWFSRLVALTGLVGQIAATIGILMVVAVFLVIGNSVRLSIFSRRDTINVMKLIGATDGFILRPFLHGGALLGLCGAVLSLILSQALVWKLSGAVAQVAAVFGTTFTVRGLGWDETLLLILIAVMIGWLAAWLATVQHLRRFTPE
SIO_010081: DDA3937_RS00645
subclass of: SO_0000673
so part of: DDA3937_RS00645
location: 148933..149904
location: region:148933-149904:1
so has part: feature:148933-149904:1:exon

WP_013315841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148933-149904:1:exon

DDA3937_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rpoH
locus tag: DDA3937_RS00650
old locus tag: Dda3937_02015
so part of: sequence
location: 150265..151122
location: region:150265-151122:1
so has part: feature:150265-151122:1:exon
subclass of: SO_0000010

9731522
type: Gene
SIO_000068: ncbigene

position:150265:1
position: 150265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151122:1
position: 151122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150265-151122:1:exon

DDA3937_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rpoH
locus tag: DDA3937_RS00650
old locus tag: Dda3937_02015
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.1 regulation; type of regulation; transcriptional level; sigma factors, anti-sigmafactors
function: 5.5.2 cell processes; adaptation to stress; temperature extremes
function: 3.3.3 regulation; genetic unit regulated; stimulon
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008458573.1
GO function: GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoH
translation: MTKDMQTFALVPQGSLEGYIRAANAYPMLTAEEERALAERLHYHGDLDAAKQLILSHLRFVIHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVELVARELGVTSKDVREMESRMAAQDMTFDPSPEDDAQPGQPMAPMLYLQDKSSDFADGIEEDNWETHAADKLTYALEGLDERSQHIIRARWLDDDNKSTLQELADHYGVSAERVRQLEKNAMKKLRAAIEA
SIO_010081: DDA3937_RS00650
subclass of: SO_0000673
so part of: DDA3937_RS00650
location: 150265..151122
location: region:150265-151122:1
so has part: feature:150265-151122:1:exon

WP_013315842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150265-151122:1:exon

DDA3937_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: panM
locus tag: DDA3937_RS00655
old locus tag: Dda3937_02016
so part of: sequence
location: complement(151241..151678)
location: region:151241-151678:-1
so has part: feature:151241-151678:-1:exon
subclass of: SO_0000010

9731523
type: Gene
SIO_000068: ncbigene

position:151241:-1
position: 151241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151678:-1
position: 151678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151241-151678:-1:exon

DDA3937_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: panM
locus tag: DDA3937_RS00655
old locus tag: Dda3937_02016
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848352.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
GO process: GO:0015940 - pantothenate biosynthetic process [Evidence IEA]; GO:0031638 - zymogen activation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate 1-decarboxylase autocleavage activator PanM
translation: MRLSVERLTKISEQDRHDLAFIWPHQNFDALERDLNHEHRLFAARFNDRLLAGVIVEIDNNSDSAELTDLQVRTSTRRHGVGKYLVEEVLRACPDVKEWWLDAADHALVSEAVMDTFMQSCGFYPVSGGWEYVVNQEKEMNREEK
SIO_010081: DDA3937_RS00655
subclass of: SO_0000673
so part of: DDA3937_RS00655
location: complement(151241..151678)
location: region:151241-151678:-1
so has part: feature:151241-151678:-1:exon

WP_013315843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151241-151678:-1:exon

DDA3937_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00660
old locus tag: Dda3937_02017
so part of: sequence
location: 152082..153194
location: region:152082-153194:1
so has part: feature:152082-153194:1:exon
subclass of: SO_0000010

9731524
type: Gene
SIO_000068: ncbigene

position:152082:1
position: 152082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153194:1
position: 153194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152082-153194:1:exon

DDA3937_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00660
old locus tag: Dda3937_02017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011191523.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter substrate-binding protein
translation: MKLSKGKALLVGCLAAAMSHAVNAADIKVAIVGAMSGPVAQYGDMEFTGARQAIADINAKGGVNGNKLVGVEYDDACDPKQAVAVANKVINDGIHYVIGHLCSSSTQPASDIYEDEGVIMITPAATAPDLTTRGYKLVMRTTGLDSDQGPTAAKYILEHVKPQRIAVVHDKQQYGEGLARAVQDSLKKSKANVVLFEGVTAGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILRQARAAGLTTKFMGPEGVGNSSLSNIAGAASEGMLVTLPKRYDQVPTNQPIVDALKAKKLDPTGPFVWTTYAALQSLTTAMQRTGSTEPAKLAADLKAKSVDTVMGPLSWDEKGDLKGFEFGVFEWHADGTSSPVK
SIO_010081: DDA3937_RS00660
subclass of: SO_0000673
so part of: DDA3937_RS00660
location: 152082..153194
location: region:152082-153194:1
so has part: feature:152082-153194:1:exon

WP_033111505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152082-153194:1:exon

DDA3937_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: livH
locus tag: DDA3937_RS00665
old locus tag: Dda3937_02018
so part of: sequence
location: 153273..154199
location: region:153273-154199:1
so has part: feature:153273-154199:1:exon
subclass of: SO_0000010

9731525
type: Gene
SIO_000068: ncbigene

position:153273:1
position: 153273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154199:1
position: 154199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153273-154199:1:exon

DDA3937_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: livH
locus tag: DDA3937_RS00665
old locus tag: Dda3937_02018
EC number: 7.4.2.2
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 4.S.108 transport; substrate; L-leucine/L-valine/L-iso-leucine
function: 7.3 location of gene products; inner membrane
function: 1.5.1.18 metabolism; building block biosynthesis; amino acids; isoleucine/valine
function: 1.5.1.19 metabolism; building block biosynthesis; amino acids; leucine
function: 6.1 cell structure; membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: high-affinity branched-chain amino acid ABC transporter permease LivH
translation: MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDAGWLLIGVAFIAAVVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQGSRDVALPSLIHGQWVLGESNGFAATLSSMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDLKMASLLGISTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSFALLIGVLLVMPTGILGRPEVEKV
SIO_010081: DDA3937_RS00665
subclass of: SO_0000673
so part of: DDA3937_RS00665
location: 153273..154199
location: region:153273-154199:1
so has part: feature:153273-154199:1:exon

WP_013315845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153273-154199:1:exon

DDA3937_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00670
old locus tag: Dda3937_02019
so part of: sequence
location: 154196..155470
location: region:154196-155470:1
so has part: feature:154196-155470:1:exon
subclass of: SO_0000010

9731526
type: Gene
SIO_000068: ncbigene

position:154196:1
position: 154196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155470:1
position: 155470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154196-155470:1:exon

DDA3937_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00670
old locus tag: Dda3937_02019
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 4.S.108 transport; substrate; L-leucine/L-valine/L-iso-leucine
function: 7.3 location of gene products; inner membrane
function: 1.5.1.18 metabolism; building block biosynthesis; amino acids; isoleucine/valine
function: 1.5.1.19 metabolism; building block biosynthesis; amino acids; leucine
function: 6.1 cell structure; membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005976438.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: high-affinity branched-chain amino acid ABC transporter permease LivM
translation: MKLHTLVNAVVSALVLLVLATFVMGMQLSLDGTQLVVHGAEKVRWMWIIAACVLVFLFQLLRPVLAQGAKKVSGPGLVLPSFDGSTPRQKLLALALIIAAVAWPFVVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLSHYYGLGFWQCLPLAGLTAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTGFTGGPNGISQIPKPTFFGLEFSRSPREGGWDTFHHFFGLTYDPSDRIIFLYMVALLLVLLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEYSMLLLGALMVLMMIWRPQGLLPMKRTQIKLQVEKKEEQA
SIO_010081: DDA3937_RS00670
subclass of: SO_0000673
so part of: DDA3937_RS00670
location: 154196..155470
location: region:154196-155470:1
so has part: feature:154196-155470:1:exon

WP_013315846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154196-155470:1:exon

DDA3937_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: livG
locus tag: DDA3937_RS00675
old locus tag: Dda3937_02020
so part of: sequence
location: 155467..156237
location: region:155467-156237:1
so has part: feature:155467-156237:1:exon
subclass of: SO_0000010

9731527
type: Gene
SIO_000068: ncbigene

position:155467:1
position: 155467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156237:1
position: 156237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155467-156237:1:exon

DDA3937_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: livG
locus tag: DDA3937_RS00675
old locus tag: Dda3937_02020
function: 4.3.A.1.a transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP binding cytoplasmic component
function: 4.S.108 transport; substrate; L-leucine/L-valine/L-iso-leucine
function: 1.1.3 metabolism; carbon utilization; amino acids
function: 1.5.1.18 metabolism; building block biosynthesis; amino acids; isoleucine/valine
function: 1.5.1.19 metabolism; building block biosynthesis; amino acids; leucine
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009114886.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG
translation: MSTQPLLSVRGLMMRFGGLLAVNNVELDLHQGEIVSLIGPNGAGKTTVFNCLTGFYRPTGGTILLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQHLKSGVFAGLLKTPAFRRAEADAQQRAAVWLERVGLLELANRQAGNLAYGQQRRLEIARCMVTRPELLMLDEPAAGLNPKETEELNELIIDLRGNHQVSVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPAEIRNNPDVVRAYLGEG
SIO_010081: DDA3937_RS00675
subclass of: SO_0000673
so part of: DDA3937_RS00675
location: 155467..156237
location: region:155467-156237:1
so has part: feature:155467-156237:1:exon

WP_013315847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155467-156237:1:exon

DDA3937_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: livF
locus tag: DDA3937_RS00680
old locus tag: Dda3937_02021
so part of: sequence
location: 156244..156945
location: region:156244-156945:1
so has part: feature:156244-156945:1:exon
subclass of: SO_0000010

9731528
type: Gene
SIO_000068: ncbigene

position:156244:1
position: 156244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156945:1
position: 156945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156244-156945:1:exon

DDA3937_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: livF
locus tag: DDA3937_RS00680
old locus tag: Dda3937_02021
EC number: 7.4.2.2
function: 4.3.A.1.a transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP binding cytoplasmic component
function: 4.S.108 transport; substrate; L-leucine/L-valine/L-iso-leucine
function: 1.1.3 metabolism; carbon utilization; amino acids
function: 1.5.1.18 metabolism; building block biosynthesis; amino acids; isoleucine/valine
function: 1.5.1.19 metabolism; building block biosynthesis; amino acids; leucine
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010436485.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF
translation: MLSLNQVSAHYGKIQALHQVSLHINQGEIVTLIGANGAGKTTLLGTLCGEPRASEGSIVFDGKDITDWQTARIMREAIAIVPEGRRVFSRMTVEENLAMGGFFASREQYQQRIARVYDLFPRLYERRIQRAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIILQIFDTIQQLREEGMTIFLVEQNANQALRLADRGYVLENGRVVLEDTGDALLANEAVRSAYLGG
SIO_010081: DDA3937_RS00680
subclass of: SO_0000673
so part of: DDA3937_RS00680
location: 156244..156945
location: region:156244-156945:1
so has part: feature:156244-156945:1:exon

WP_013315848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156244-156945:1:exon

DDA3937_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00685
old locus tag: Dda3937_02022
so part of: sequence
location: 157016..158200
location: region:157016-158200:1
so has part: feature:157016-158200:1:exon
subclass of: SO_0000010

9731529
type: Gene
SIO_000068: ncbigene

position:157016:1
position: 157016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158200:1
position: 158200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157016-158200:1:exon

DDA3937_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00685
old locus tag: Dda3937_02022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019455304.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PLP-dependent aminotransferase family protein
translation: MSTDGLLAQRMARLKSSAIRELLKHSKMDGVISLAGGIPSDALFDFQGLNEATQLAITEQPKSAFQYGLTEGSPLLRERIAELCALRGVHTQAQDIVVTAGSQQALDLVMRATTNPQDIFVVERPTYLAALQTLELAEAQVMSVSSDENGMVVDELAALLETTRIKGVYLVPNFGNPSGVTLSDARRRQLVALAARHDFLIVEDDPYGELRFTEERHATLYQLAKEAGHADRVVYTSSFSKILAPGLRLGWAILPDWLLHKVAIIKQAADLHASSLSQTIVEYYLGTGRLPAQIDKIRQAYRQKGELLSELMASELGDVLSFNQPKGGMFLWARFRQPFDTTAWLQKTLAQGVVFVPGEFFFADNPDQSTLRLSFATATEEQMHEAVARLRRAL
SIO_010081: DDA3937_RS00685
subclass of: SO_0000673
so part of: DDA3937_RS00685
location: 157016..158200
location: region:157016-158200:1
so has part: feature:157016-158200:1:exon

WP_033111506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157016-158200:1:exon

DDA3937_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00690
old locus tag: Dda3937_02023
so part of: sequence
location: complement(158331..159968)
location: region:158331-159968:-1
so has part: feature:158331-159968:-1:exon
subclass of: SO_0000010

9731530
type: Gene
SIO_000068: ncbigene

position:158331:-1
position: 158331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159968:-1
position: 159968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158331-159968:-1:exon

DDA3937_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00690
old locus tag: Dda3937_02023
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886621.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MNLFKKMKLGTLLSISFAAVIIIGFLVASFGRFQLHQLSGNIETLAQNRLVKLVLIHNYKDNINIVANAIRNMVMMTDQAQMAAESKRIRETIDKSTEIINTFSNMTVSPDAKVLLKHLENVRPENIQALKKAEALALENRDEEAKAVILNEFQPAQNKVFNAIDDIINYQKNATADLAHSSEQRADSAGQTMLVLALIAMAIGCLVAWFITRQVRSKLGGEPADAASIAQQIAQGNLITTIPIRDKDSGSVLAAIDQMRGGLINIVEQVSQSSHAIASGANEIAAGTNDLSQRTEEQAASLQQTAASMEQISNAVSHNVETIRMAAELANATSQTASKGNQVVGDVVATMADITQSSHQIVEIISLIDNIAFQTNILALNAGVEAARAGEEGKGFAVVAHEVRSLAQHSASAAREIKSLIIESVKKIETGADRVNLAGSTISELLEQSRQVAQLINEIGITTNEQQQGIAQINTAIAQLDQVTHQNAALVEESACATDNLNHQAAHLVEVISVFVVDDVISRKRLDTPDEHSLVPVAGQQLATH
SIO_010081: DDA3937_RS00690
subclass of: SO_0000673
so part of: DDA3937_RS00690
location: complement(158331..159968)
location: region:158331-159968:-1
so has part: feature:158331-159968:-1:exon

WP_033111507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158331-159968:-1:exon

DDA3937_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00695
old locus tag: Dda3937_02024
so part of: sequence
location: 160727..161644
location: region:160727-161644:1
so has part: feature:160727-161644:1:exon
subclass of: SO_0000010

9731531
type: Gene
SIO_000068: ncbigene

position:160727:1
position: 160727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161644:1
position: 161644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160727-161644:1:exon

DDA3937_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00695
old locus tag: Dda3937_02024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848344.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSPISFNRSAAGTSAQNARTDNDAGSTARAGAQADASQEQPSVTSVLVQFSDEVRKRIDSAMRTNMSKINESKQDLARGRIEEIKRRIQMLKMMMMMSPGQSVPPGVLREIRQLAAELGQAAKTLNDGGGNGAANAGTAGGEGSSGAVANGVGDASASALSGAMSVSAAGENASAESDGLADEDQAVGASPAAKSGEEASAQEAEQLQNVVAAITERGAGSQQRRMDAKSVQDAVRELKSLLAMVKNASKNDDKEAQKQIQAINQSIADIEKTVQSMNMTGGGADISVDLSVGPAGNVSIDVQV
SIO_010081: DDA3937_RS00695
subclass of: SO_0000673
so part of: DDA3937_RS00695
location: 160727..161644
location: region:160727-161644:1
so has part: feature:160727-161644:1:exon

WP_033111508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160727-161644:1:exon

DDA3937_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00700
old locus tag: Dda3937_02025
so part of: sequence
location: complement(161743..163362)
location: region:161743-163362:-1
so has part: feature:161743-163362:-1:exon
subclass of: SO_0000010

9731532
type: Gene
SIO_000068: ncbigene

position:161743:-1
position: 161743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163362:-1
position: 163362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161743-163362:-1:exon

DDA3937_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00700
old locus tag: Dda3937_02025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315853.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MQILKNMKLGAMLGSGFILVILIGFIVAIFGRSQLIHVGNNLDYLSNIRLNNLIAMQEIKDNLNAAARIIRESAIQTDAAHLAQEKHDLEQLIDRNNDLLRQLDEKLKLKKSRELLAQINQARPPYSNAVRKVIELSLSGQQEQARALILGDLLTTQTTLFNAMDTMITEHKNDTIAMSQRFMADASYSGTLLLIVTAISALLGALVAWLITRRVKGQLGGEPTYASHIAQQVAQGDLSIDVMLKTSDHHSLLAAMRTMRDSLSHIVSQVRQSSESIATGSQQIAIGNADLSQRTEEQAASLQQTAASMEQISQTIRQNGDTVREAAQLATTASQTAAKGSEVVSDVIRTMEEITSSSRKIGDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSASAAREIKELITESMEKVESGSQRVGHAGVTMEEIVSQAHHVAELIKEIGVTTTEQESGIGQIHQAVSQLDQVTQQNAALVEQSASAADSLNAQAGHLVQLMNVFVLDGHAAQPQRSHGGDWRLALASR
SIO_010081: DDA3937_RS00700
subclass of: SO_0000673
so part of: DDA3937_RS00700
location: complement(161743..163362)
location: region:161743-163362:-1
so has part: feature:161743-163362:-1:exon

WP_033111509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161743-163362:-1:exon

DDA3937_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00705
old locus tag: Dda3937_02026
so part of: sequence
location: complement(163808..165436)
location: region:163808-165436:-1
so has part: feature:163808-165436:-1:exon
subclass of: SO_0000010

9731533
type: Gene
SIO_000068: ncbigene

position:163808:-1
position: 163808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165436:-1
position: 165436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163808-165436:-1:exon

DDA3937_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00705
old locus tag: Dda3937_02026
function: 5.3 cell processes; motility (incl. chemotaxis, energytaxis, aerotaxis, redoxtaxis)
function: 3.1.3.3 regulation; type of regulation; posttranscriptional; inhibition / activation of enzymes
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886618.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MRFFKEMKLGSMLGTGFAMVIVIGFLVAIYGQLQLRQLSTNIQTLSKERITNLLLIQEYKDNLNIAARVIRNIALLSDHQQMTFEKQRLDNMAPRNDDIIAILHKVAVTPEQQALIAQLDQNRPVYEDAVGRAIEKGLENKDDDARNLILTDVRRAQENMFKVIDSLLAYQKSATSTTADDSESRASNAGILMLSLAALIAVTGSLIAWLITRRIKGQLGGEPTYASHIAQQVAQGDLSVDVMLKTRDHHSLLAAMRTMRDSLSHIVSQVRQSSESIATGSQQIAMGNADLSQRTEEQAASLQQTAASMEQISQTIRQNGETVREAAQLATTASDTAAKGSEVVSNVIRTMGDITASSRKIGDIISVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSASAAREIKELITESMEKVESGSQLVGHAGTTMDDIVTQARHVADLIKEIGVTTTEQESGISQINLAVNQLDQVTQQNAALVEQSASAADSLSDQARHLVQLMNVFVVAGNNRQDEHAAYPPRADLRLALTSG
SIO_010081: DDA3937_RS00705
subclass of: SO_0000673
so part of: DDA3937_RS00705
location: complement(163808..165436)
location: region:163808-165436:-1
so has part: feature:163808-165436:-1:exon

WP_013315853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163808-165436:-1:exon

DDA3937_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00710
old locus tag: Dda3937_02027
so part of: sequence
location: complement(166251..167912)
location: region:166251-167912:-1
so has part: feature:166251-167912:-1:exon
subclass of: SO_0000010

9731534
type: Gene
SIO_000068: ncbigene

position:166251:-1
position: 166251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167912:-1
position: 167912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166251-167912:-1:exon

DDA3937_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00710
old locus tag: Dda3937_02027
function: 5.3 cell processes; motility (incl. chemotaxis, energytaxis, aerotaxis, redoxtaxis)
function: 3.1.3.3 regulation; type of regulation; posttranscriptional; inhibition / activation of enzymes
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019845383.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MSIIKNMKLTTMLGTGFAIVLIISFFVSTYGQFQLRQQSDNVNALAGDQLEGLLLVQELKDNLNSVAISIRNLTLFTAPDQVAQEKQLITKTITRNSEILKRIAELASTPREKALFDVIDQARPASLAATQKALSLIQDNKLDETKAVIMNEVKPAQDTYFKAINDMVSYQKSDTRRSADEAGQSASFAGMLMLTFAGISTVLGIAIAWLIARRIKKLLGGEPAYTSDIASQIASGNLAINVELQSGDTTSLLAAMNDMRARLSGIVQQVHDSSASISTGSSEIAIGSNDLSRRTEEQASSVQQTAASMEQISQTIRQNGDTVREAAQLASSASQTATKGNEVVRNVITTMSDISTSSRKIGDIITVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSASAAREIKELITTSMEKVESGSQLVAHAGETMVDIVTQAQHVANLISEIGVTTREQESGISQINQAITQMDSATQQNAALVEESASAADSLSDQAAKLVELMSVFTIHNTFSKTSPRQQSHTSPALKKPALANKGSTHNWEQF
SIO_010081: DDA3937_RS00710
subclass of: SO_0000673
so part of: DDA3937_RS00710
location: complement(166251..167912)
location: region:166251-167912:-1
so has part: feature:166251-167912:-1:exon

WP_013315854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166251-167912:-1:exon

DDA3937_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00715
old locus tag: Dda3937_02028
so part of: sequence
location: complement(168379..170061)
location: region:168379-170061:-1
so has part: feature:168379-170061:-1:exon
subclass of: SO_0000010

9731535
type: Gene
SIO_000068: ncbigene

position:168379:-1
position: 168379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170061:-1
position: 170061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168379-170061:-1:exon

DDA3937_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00715
old locus tag: Dda3937_02028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010303269.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MNALKKTKLGTMLSAGFALVIVIGLLVATFGRTQLAGLGDDIDHLSTTTLTNMMLIQEAKTGFDTNSRLVRNIALSNDPERIAREKQLIDRQIARNTEVLKQLSERLDTPETRDQLNQLTLARPAYLKAFNNAVQLGISGQSEQREQARELILNDMQTAQNGVFKALDNMLDFQKKITMNVVADSMQNARSDGTLMLALALVAAVLGALTAWLITRTVKGQLGGEPVYAAAVAQRISDGDLAFNVELRAGDDHSVLAAMNDMREKLGQIVTQVRQSSESIATGASEIAAGSTDLSQRTEEQAASLQQTAASMEQMSQTIRQNGDTVRTATKLAQSASSTAAKGGEAVNNIVRTMEDISVSSHKIGDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSASAAKEIKELITASVEKVETGSTLVSEAGSTIDELVKQARHVADLIGEIGVTTHEQESGISQINDAVNQLDQVTQQNASLVEESASAADSLSDQAARLVELMSIFNIQNSFNHQTTLLQTPGTGQKKPMPSKLVLANNASNSNWEQF
SIO_010081: DDA3937_RS00715
subclass of: SO_0000673
so part of: DDA3937_RS00715
location: complement(168379..170061)
location: region:168379-170061:-1
so has part: feature:168379-170061:-1:exon

WP_033111510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168379-170061:-1:exon

DDA3937_RS23530
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23530
pseudo: true
so part of: sequence
location: <170615..170800
location: region:170615-170800:1
so has part: feature:170615-170800:1:exon
subclass of: SO_0000010

70537601
type: Gene
SIO_000068: ncbigene

position:170615:1
position: 170615
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:170800:1
position: 170800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170615-170800:1:exon

DDA3937_RS23530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007886806.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: DDA3937_RS23530
subclass of: SO_0000673
so part of: DDA3937_RS23530
location: <170615..170800
location: region:170615-170800:1
so has part: feature:170615-170800:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170615-170800:1:exon

DDA3937_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ugpB
locus tag: DDA3937_RS00720
old locus tag: Dda3937_02029
so part of: sequence
location: 171109..172428
location: region:171109-172428:1
so has part: feature:171109-172428:1:exon
subclass of: SO_0000010

9731536
type: Gene
SIO_000068: ncbigene

position:171109:1
position: 171109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172428:1
position: 172428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171109-172428:1:exon

DDA3937_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ugpB
locus tag: DDA3937_RS00720
old locus tag: Dda3937_02029
EC number: 7.6.2.-
function: 4.3.A.1.p transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, periplasmic binding component
function: 4.S.78 transport; substrate; glycerol-3-P
function: 7.2 location of gene products; periplasmic space
function: 1.5.4 metabolism; building block biosynthesis; fatty acid and phosphatidic acid
function: 1.3.6 metabolism; energy metabolism, carbon; aerobic respiration
function: 1.3.7 metabolism; energy metabolism, carbon; anaerobic respiration
function: 1.7.6 metabolism; central intermediary metabolism; glycerol metabolism
function: 1.6.1 metabolism; macromolecules (cellular constituent) biosynthesis; phospholipid
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004710220.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB
translation: MFQHAIRKTAAVVIMALAASAQAQAVTEIPFWHSMEGELGKTVNSLADRFNQTHSDVKIVPVYKGNYEQSLAAGIAAFRSDNAPAILQVYEVGTATMMASKAIKPVYQVFKDAGVPYDEKIFVPTVSGYYSDAKTGHLLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQQMAEYTAKLRASGMKCGYASGWQGWIQIENFSAWHGLPIATKNNGFDGLDAVLEFNKPVQVKHIQMLEDMNKKGDFTYYGRKDEPTEKFYNGDCAMTTASSGSLANIRQYAKFNYGVAMMPYDADVKGAPQNAIIGGASLWVMNGKDAATYKGVAEFMQFLSTPEIAAEWHQKTGYLPITTAAYELTKQQGFYDKNPGADIATRQMLNKEPLPFTKGLRLGNMPQIRTIVDEELESVWTGKKTPQQALDAAVERGNALLRRFEQANK
SIO_010081: DDA3937_RS00720
subclass of: SO_0000673
so part of: DDA3937_RS00720
location: 171109..172428
location: region:171109-172428:1
so has part: feature:171109-172428:1:exon

WP_013315856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171109-172428:1:exon

DDA3937_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ugpA
locus tag: DDA3937_RS00725
old locus tag: Dda3937_04431
so part of: sequence
location: 172528..173415
location: region:172528-173415:1
so has part: feature:172528-173415:1:exon
subclass of: SO_0000010

9731537
type: Gene
SIO_000068: ncbigene

position:172528:1
position: 172528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173415:1
position: 173415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172528-173415:1:exon

DDA3937_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ugpA
locus tag: DDA3937_RS00725
old locus tag: Dda3937_04431
EC number: 7.6.2.-
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 7.3 location of gene products; inner membrane
function: 6.1 cell structure; membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004703935.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sn-glycerol-3-phosphate ABC transporter permease UgpA
translation: MTASRPVFGRSLLPYLLVLPQLTITVIFFLWPAGQALWYSVQSVDPFGLSSQFVGLDNFTNLFHDSYYLGSFYTTLLFSFLVAASGLIVSLFLAALVDYTLRFSRLYQTLLILPYAVAPAVAAVLWMFLFNPGLGLITWLLHQWGYDWNHAQHSGQAMFLVVLASVWKQISYNFLFFLAALQSIPRSLIEAAAIDGAGPVRRFFNLVLPLISPVSFFLLVVNLTYAFFDTFPVIDAATGGGPVQATTTLIYKIYREGFAGLDLSSSAAQSVVLMLVVTVLTVIQFRFVERKVNYQ
SIO_010081: DDA3937_RS00725
subclass of: SO_0000673
so part of: DDA3937_RS00725
location: 172528..173415
location: region:172528-173415:1
so has part: feature:172528-173415:1:exon

WP_013315857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172528-173415:1:exon

DDA3937_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ugpE
locus tag: DDA3937_RS00730
old locus tag: Dda3937_03043
so part of: sequence
location: 173457..174305
location: region:173457-174305:1
so has part: feature:173457-174305:1:exon
subclass of: SO_0000010

9731538
type: Gene
SIO_000068: ncbigene

position:173457:1
position: 173457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174305:1
position: 174305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173457-174305:1:exon

DDA3937_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ugpE
locus tag: DDA3937_RS00730
old locus tag: Dda3937_03043
EC number: 7.6.2.-
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 7.3 location of gene products; inner membrane
function: 4.S.78 transport; substrate; glycerol-3-P
function: 1.5.4 metabolism; building block biosynthesis; fatty acid and phosphatidic acid
function: 1.3.6 metabolism; energy metabolism, carbon; aerobic respiration
function: 1.3.7 metabolism; energy metabolism, carbon; anaerobic respiration
function: 1.7.6 metabolism; central intermediary metabolism; glycerol metabolism
function: 1.6.1 metabolism; macromolecules (cellular constituent) biosynthesis; phospholipid
function: 6.1 cell structure; membrane
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229264.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO process: GO:0015794 - glycerol-3-phosphate transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sn-glycerol-3-phosphate ABC transporter permease UgpE
translation: MIENRRGLDIFSHAMLVVAILAVLFPLYVAFIAATLSQEQMSQVPMSLIPGGHLWENMTYIWRHGVGDNNSAPFGLMLFNSFVMALAITVGKISVSMLSAFAIVYFRFPCRNLFFWMIFSTLMLPVEVRIFPTVEVISHLSMTNSYVGLTLPVMASATATFLFRQFFMTLPDELLEAARIDGAGPMRFFFDMVLPLSKTNLAALFVITFIYGWNQYLWPLLIVNDPNLGTAVAGIQSMIATGDTATPWHQVMAAMLMTMLPPLLIVLLMQRWFVRGLVDSEK
SIO_010081: DDA3937_RS00730
subclass of: SO_0000673
so part of: DDA3937_RS00730
location: 173457..174305
location: region:173457-174305:1
so has part: feature:173457-174305:1:exon

WP_013315858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173457-174305:1:exon

DDA3937_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00735
old locus tag: Dda3937_03044
so part of: sequence
location: 174312..175388
location: region:174312-175388:1
so has part: feature:174312-175388:1:exon
subclass of: SO_0000010

9731539
type: Gene
SIO_000068: ncbigene

position:174312:1
position: 174312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175388:1
position: 175388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174312-175388:1:exon

DDA3937_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00735
old locus tag: Dda3937_03044
function: 4.3.A.1.a transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP binding cytoplasmic component
function: 7.1 location of gene products; cytoplasm
function: 4.S.78 transport; substrate; glycerol-3-P
function: 1.5.4 metabolism; building block biosynthesis; fatty acid and phosphatidic acid
function: 1.3.6 metabolism; energy metabolism, carbon; aerobic respiration
function: 1.3.7 metabolism; energy metabolism, carbon; anaerobic respiration
function: 1.7.6 metabolism; central intermediary metabolism; glycerol metabolism
function: 1.6.1 metabolism; macromolecules (cellular constituent) biosynthesis; phospholipid
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sn-glycerol-3-phosphate import ATP-binding protein UgpC
translation: MACLKLQAVTKSYDGKTQVIQPIDLDVADGEFVVMVGPSGCGKSTLLRMVAGLEQTTSGDIYIGDERVTDKEPKDRGIAMVFQNYALYPHMSVYDNMAYGLKIRGFGKAQIRQRVEEAARILELQPLLHRKPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLELQQLHKRLKTTSLYVTHDQVEAMTLAHRVIVMNKGVAEQIGAPAEIYRKPASLFVASFIGSPAMNLWAGQVSMDGSRVALSADFSLPLPVAKPEWQGRAVTLGMRPEHILQSTADAGGVPLVVETLELLGADNLAHGKWAGQNIVVRLSHEHCPAVGETLWLTLPAASWHIFDSQSGLRMEA
SIO_010081: DDA3937_RS00735
subclass of: SO_0000673
so part of: DDA3937_RS00735
location: 174312..175388
location: region:174312-175388:1
so has part: feature:174312-175388:1:exon

WP_013315859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174312-175388:1:exon

DDA3937_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ugpQ
locus tag: DDA3937_RS00740
old locus tag: Dda3937_03045
so part of: sequence
location: 175385..176134
location: region:175385-176134:1
so has part: feature:175385-176134:1:exon
subclass of: SO_0000010

9731540
type: Gene
SIO_000068: ncbigene

position:175385:1
position: 175385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176134:1
position: 176134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175385-176134:1:exon

DDA3937_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ugpQ
locus tag: DDA3937_RS00740
old locus tag: Dda3937_03045
EC number: 3.1.4.46
function: 1.7.6 metabolism; central intermediary metabolism; glycerol metabolism
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942808.1
GO function: GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO process: GO:0006629 - lipid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerophosphodiester phosphodiesterase
translation: MTPNWPYPAIVAHRGGGSLAPENTLAAIDVGAHHGHRMIEFDAKLSQDGQIFLLHDDTLERTSNGWGVAGDLPWDKLVGLDVGSWYSRQFRGERLPLLSEVAKRCAQYGMAANIEIKPTTGCEDQTGRVVALAARALWQNHPVAPLLSSFSVAALEAAQQAAPELPRGLLLDEWDDDWRALTERLGCVSIHLNHQLLDEARVRLLKDAGLRILVYTVNQPDRARNLLLWGVDCICTDRIDLIGPQFNAS
SIO_010081: DDA3937_RS00740
subclass of: SO_0000673
so part of: DDA3937_RS00740
location: 175385..176134
location: region:175385-176134:1
so has part: feature:175385-176134:1:exon

WP_013315860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175385-176134:1:exon

DDA3937_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00745
old locus tag: Dda3937_03046
so part of: sequence
location: 176340..177296
location: region:176340-177296:1
so has part: feature:176340-177296:1:exon
subclass of: SO_0000010

9731541
type: Gene
SIO_000068: ncbigene

position:176340:1
position: 176340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177296:1
position: 177296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176340-177296:1:exon

DDA3937_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00745
old locus tag: Dda3937_03046
function: 0.1 unknown function; conserved hypothetical product
function: 6.1 cell structure; membrane
function: 4.9.B transport; Transporters of Unknown Classification; uncharacterized transport protein
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012772873.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AEC family transporter
translation: MPTFILSLWHQIFLSLPLFVLIALGYALIRFGRWPSTVTDALTKFVFSVALPAMLFRMMCDFSKRPAVDARLLIAFFGSCLIVFVLGRIVASRVFRLDGVSGSVFSLSGIFSNNVMLGLPIATLMLGPQAIPSVALVLVFNGLILWTLVTVSVEWARNGSLSMQGFTKTALGVLKNPLIIGILSGTFYSLTGLPLPDSIDKPIGMLSQIGVPLSLVALGMGLAEYRIRDGWQISVAICLIKLVVQPLVVWVLAVALGLPEMETRVVVLLGSMAVGVNIYLMSRQFNVLGGPVAASLLMSTALAAVTTPLILTLMGVRV
SIO_010081: DDA3937_RS00745
subclass of: SO_0000673
so part of: DDA3937_RS00745
location: 176340..177296
location: region:176340-177296:1
so has part: feature:176340-177296:1:exon

WP_013315861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176340-177296:1:exon

DDA3937_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00750
old locus tag: Dda3937_03047
so part of: sequence
location: complement(177370..177654)
location: region:177370-177654:-1
so has part: feature:177370-177654:-1:exon
subclass of: SO_0000010

9731542
type: Gene
SIO_000068: ncbigene

position:177370:-1
position: 177370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177654:-1
position: 177654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177370-177654:-1:exon

DDA3937_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00750
old locus tag: Dda3937_03047
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886603.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2756 domain-containing protein
translation: MKIISPLMLLLSLPLLAQAATQQISPQQQQFENGISSQKRLLQDMQQNQALQQQQLNSDIQQRSREQQRQLQQQLEQNRQRIQQSAPGNTNRTY
SIO_010081: DDA3937_RS00750
subclass of: SO_0000673
so part of: DDA3937_RS00750
location: complement(177370..177654)
location: region:177370-177654:-1
so has part: feature:177370-177654:-1:exon

WP_013315862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177370-177654:-1:exon

DDA3937_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00755
old locus tag: Dda3937_03048
so part of: sequence
location: 177824..178288
location: region:177824-178288:1
so has part: feature:177824-178288:1:exon
subclass of: SO_0000010

9731543
type: Gene
SIO_000068: ncbigene

position:177824:1
position: 177824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178288:1
position: 178288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177824-178288:1:exon

DDA3937_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00755
old locus tag: Dda3937_03048
EC number: 2.1.1.207
function: 2.2.3 information transfer; RNA related; RNA modification
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848330.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (cytidine(34)-2'-O)-methyltransferase
translation: MFHIALYEPQIAPNTGNIIRLAANNGCSLHLIEPLGFDFEEKKLRRAGLDYHDLASVSRHRNYQDFLQAVAGRRIFACTTKGSRPYDEPDYQPGDVLLFGSETAGLPDDIRNGFAPECRIRIPMEPNCRSLNLSNSVAIISYEAWRQNGFGGRR
SIO_010081: DDA3937_RS00755
subclass of: SO_0000673
so part of: DDA3937_RS00755
location: 177824..178288
location: region:177824-178288:1
so has part: feature:177824-178288:1:exon

WP_013315863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177824-178288:1:exon

DDA3937_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00760
old locus tag: Dda3937_03049
so part of: sequence
location: 178343..178933
location: region:178343-178933:1
so has part: feature:178343-178933:1:exon
subclass of: SO_0000010

9731544
type: Gene
SIO_000068: ncbigene

position:178343:1
position: 178343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178933:1
position: 178933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178343-178933:1:exon

DDA3937_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00760
old locus tag: Dda3937_03049
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848329.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRSIPASALRRTLIMGNSGSGKSWLAEQLAARLQAPAIDLDLINWEPGGYGKARERALVKAEARELAQAECWIMEGVYGWLMQEVVQQATALIWLDIPVDECLNNIRQRGLRRGGDEAALAELLRWAGEYRERQSNSSFSGHQRVFEQCAPEAPSQRMVVPQRMVVSQRMVVPQRIMLHSREDIERFMAGILSND
SIO_010081: DDA3937_RS00760
subclass of: SO_0000673
so part of: DDA3937_RS00760
location: 178343..178933
location: region:178343-178933:1
so has part: feature:178343-178933:1:exon

WP_033111511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178343-178933:1:exon

DDA3937_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00765
old locus tag: Dda3937_03050
so part of: sequence
location: complement(178969..179742)
location: region:178969-179742:-1
so has part: feature:178969-179742:-1:exon
subclass of: SO_0000010

9731545
type: Gene
SIO_000068: ncbigene

position:178969:-1
position: 178969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179742:-1
position: 179742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178969-179742:-1:exon

DDA3937_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00765
old locus tag: Dda3937_03050
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315865.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3142 domain-containing protein
translation: MGATAQILLVVRYTVVLTSLLCLSVTAHSATVNAARYHAFWLWAAVQPQPVLSQADTLYLHQGEIARRGGKVEFLRQGIPVSALPVRHLWLSFRVSELRLGEPELRRLLQLRQRWAAAGNRVDGIQIDFDAKSYHLSHYVAFLQMLRQRLPPDCRLSVTGLLDWAKTGDVRQLNRLDGVVDELVVQTYQGRRTVENYAAYLPALMNLTLPFRLGLVQHGKWDEQWQRRLAASPFYRGEVVFLLNPIPARRSPILQQR
SIO_010081: DDA3937_RS00765
subclass of: SO_0000673
so part of: DDA3937_RS00765
location: complement(178969..179742)
location: region:178969-179742:-1
so has part: feature:178969-179742:-1:exon

WP_013315865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178969-179742:-1:exon

DDA3937_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00770
old locus tag: Dda3937_03051
so part of: sequence
location: complement(179712..181913)
location: region:179712-181913:-1
so has part: feature:179712-181913:-1:exon
subclass of: SO_0000010

9731546
type: Gene
SIO_000068: ncbigene

position:179712:-1
position: 179712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181913:-1
position: 181913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179712-181913:-1:exon

DDA3937_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00770
old locus tag: Dda3937_03051
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942813.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKGLALLAGFIATLVQMPAYASGDGVCGFSDADCGMPALPYLLPDNDTRTNLVLLQSSRNHIPLPIPQPEPDQTRSRVDPFTAYRVMGLAATEDNSASAKTDTPADPSAPSDDKADEENTSLLQKATQLHFPDAELGKLRDLTPVDLDGRWVSNDLTTLESFFDLLLADKELNDAQRTQLALVRMRILSSEYGVSDANTDLAGVPDAGHAGELRRYLASAVAFYEGQLDQADKGFQQLLSASQPWVAETARYMLIRVSINQAMKDAQDEYNMFDPRKMDKAAGKQAAQRVDEYLKQYPRGKYADSAEGLYRRAEWISGDTVALASHFSQVLASAKSVDQLQAIGNEIDNKLLEDNQFVSSADTPILMLVQDIKRLRSPDGWMMLPALTQEEITRQQPLFEKAGMQEEFRYLQAAFQYYQQRDYAAVLKTLPMTTAEDITNVTAFSSQVLRGLAMQRQKQWDDAEAHWRHLLMLKTTYTQQQFLQLMLAQTLVDSGQPGRVFTPESPVKNLRFRSAILKVSADADLLHRQTGPQQTHEERAIALHTLLTKQLTHRDYAGFLKDSALLKTIAPLKSTENMSWNEEDLTVFGWDGSDTEEGYECPTLQETVTTLNQNANDAHALNCLGEFVLRTGNGVGFDWGESNMLNGLTDAASYYPGKEFNRLDNYMQVIADAKAPPEDKSYALYRAIYCYAPSGYNDCGSQDISKETRKAWFRQLKADFKGSQWARQLKYYW
SIO_010081: DDA3937_RS00770
subclass of: SO_0000673
so part of: DDA3937_RS00770
location: complement(179712..181913)
location: region:179712-181913:-1
so has part: feature:179712-181913:-1:exon

WP_013315866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179712-181913:-1:exon

DDA3937_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: cpxA
locus tag: DDA3937_RS00775
old locus tag: Dda3937_03052
so part of: sequence
location: complement(182150..183523)
location: region:182150-183523:-1
so has part: feature:182150-183523:-1:exon
subclass of: SO_0000010

9731547
type: Gene
SIO_000068: ncbigene

position:182150:-1
position: 182150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183523:-1
position: 183523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182150-183523:-1:exon

DDA3937_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: cpxA
locus tag: DDA3937_RS00775
old locus tag: Dda3937_03052
EC number: 3.6.1.-
function: 1.2.3 metabolism; macromolecule degradation; proteins/peptides/glycopeptides
function: 3.1.3.2 regulation; type of regulation; posttranscriptional; covalent modification, demodification, maturation
function: 3.1.2.4.3 regulation; type of regulation; transcriptional level; complex regulation; two component regulatory systems (external signal)
function: 5.6.2 cell processes; protection; detoxification (xenobiotic metabolism)
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 2.3.3 information transfer; protein related; posttranslational modification
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015379421.1
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: envelope stress sensor histidine kinase CpxA
translation: MINSLTARIFAIFWLTLALVLMLVLMLPKLDSRQLTPLLENEQRQGLMLEQHIEAELASDPANDLLWWRRLFRVIEKWAPPGQRLLLVTSEGRVIGAQRNEMQMVRNFIGQSDSADFPQKKKYGRLELLGPFSVRDGEDSYLMYMLRPASSPQSDFINLLFDRPLLLLIVTMLTSSPLLLWLAWSLAKPARKLKNAADEVARGNLKQHPELESGPQEFRATGSSFNQMVSALERMVTAQQRLLSDISHELRTPLTRLQLATALLRRRQGEGNELNRIETETQRLDGMINDLLVLSRNQHKHELSREELQADELWNDVLDDARFEAEQMGKTLEVLSPPGPWPLFGNPTALDSALENVVRNALRYSHSRIAVSFSVDAQGVTIVVGDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAISQHRGWAKADESPLGGLQLTLWLPLYQRR
SIO_010081: DDA3937_RS00775
subclass of: SO_0000673
so part of: DDA3937_RS00775
location: complement(182150..183523)
location: region:182150-183523:-1
so has part: feature:182150-183523:-1:exon

WP_013315867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182150-183523:-1:exon

DDA3937_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: cpxR
locus tag: DDA3937_RS00780
old locus tag: Dda3937_03053
so part of: sequence
location: complement(183540..184238)
location: region:183540-184238:-1
so has part: feature:183540-184238:-1:exon
subclass of: SO_0000010

9731548
type: Gene
SIO_000068: ncbigene

position:183540:-1
position: 183540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184238:-1
position: 184238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183540-184238:-1:exon

DDA3937_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: cpxR
locus tag: DDA3937_RS00780
old locus tag: Dda3937_03053
function: CpxR controls the expression of genes involved in protein folding and degradation
function: 1.2.3 metabolism; macromolecule degradation; proteins/peptides/glycopeptides
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.4.3 regulation; type of regulation; transcriptional level; complex regulation; two component regulatory systems (external signal)
function: 3.1.2.2 regulation; type of regulation; transcriptional level; activator
function: 5.6.2 cell processes; protection; detoxification (xenobiotic metabolism)
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005224372.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: envelope stress response regulator transcription factor CpxR
translation: MNKILLVDDDRELTSLLRELLEMEGFNVVVAHDGEQALSVLDDSVDLLLLDIMMPKKNGIDTLKEVRQRYQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSNWTDQQQAGEASAPTIEVDALRLNPGRQEASFDDEVLDLTGTEFTLLYLLAQRLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPERKDGLPWFKTLRGRGYLMVSTA
SIO_010081: DDA3937_RS00780
subclass of: SO_0000673
so part of: DDA3937_RS00780
location: complement(183540..184238)
location: region:183540-184238:-1
so has part: feature:183540-184238:-1:exon

WP_013315868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183540-184238:-1:exon

DDA3937_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: cpxP
locus tag: DDA3937_RS00785
old locus tag: Dda3937_03054
so part of: sequence
location: 184449..185009
location: region:184449-185009:1
so has part: feature:184449-185009:1:exon
subclass of: SO_0000010

9731549
type: Gene
SIO_000068: ncbigene

position:184449:1
position: 184449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185009:1
position: 185009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184449-185009:1:exon

DDA3937_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: cpxP
locus tag: DDA3937_RS00785
old locus tag: Dda3937_03054
function: CpxP periplasmic protein is a possible chaperone which is involved in feedback inhibition of Cpx signal transduction pathway
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.4.3 regulation; type of regulation; transcriptional level; complex regulation; two component regulatory systems (external signal)
function: 5.6.2 cell processes; protection; detoxification (xenobiotic metabolism)
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848324.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell-envelope stress modulator CpxP
translation: MRGTIITLSFASLLMLVTGTVVATENSLPGENNLSSENKAPELGNCYRDDSAMKREESQQGMFDGVKLTEHQRQQMRDLMRQVRHEQPVYDTNDVEIMHRLVTAEKFDAPAVQAQVARMVQAQIARQVEIARVSNQMYNMLTPEQKSILDQKHEQAMQSVRQQMSTSGSRSQNLELSRQGLDDSTE
SIO_010081: DDA3937_RS00785
subclass of: SO_0000673
so part of: DDA3937_RS00785
location: 184449..185009
location: region:184449-185009:1
so has part: feature:184449-185009:1:exon

WP_013315869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184449-185009:1:exon

DDA3937_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00790
so part of: sequence
location: complement(185220..185708)
location: region:185220-185708:-1
so has part: feature:185220-185708:-1:exon
subclass of: SO_0000010

23677379
type: Gene
SIO_000068: ncbigene

position:185220:-1
position: 185220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185708:-1
position: 185708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185220-185708:-1:exon

DDA3937_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886593.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKMNFPFLFLGLMAIIPSQASSLTTDNNEKKLEVGFGKPTYRQTLHYRKLYEKKPFPDAEIFYYDNGIYKIISQGEEHYGVYVMQGNFQDQTYTIRYISLPSEDWGKKTAFHQLTFINGDKEKYFIQNAIVETGEAIAQQNGTFSLEENKISNPITQKWHKN
SIO_010081: DDA3937_RS00790
subclass of: SO_0000673
so part of: DDA3937_RS00790
location: complement(185220..185708)
location: region:185220-185708:-1
so has part: feature:185220-185708:-1:exon

WP_033111512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185220-185708:-1:exon

DDA3937_RS23535
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23535
old locus tag: Dda3937_03056
so part of: sequence
location: 186067..187344
location: region:186067-187344:1
so has part: feature:186067-187344:1:exon
subclass of: SO_0000010

70537602
type: Gene
SIO_000068: ncbigene

position:186067:1
position: 186067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187344:1
position: 187344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186067-187344:1:exon

DDA3937_RS23535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23535
old locus tag: Dda3937_03056
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004706393.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MSTKYIALLTQVGAARLANAIALGKQLEITQMGVGDGGGMLPTPDTTQTKLINEKRRAPLNSLNIDPASANQIIAEQVIPDHEGGFWLREIGLYDADDNLVAVANCPETYKPQMQEGSGRVQTVRMILAVGQTDAVSLKIDPAVVLASRQYVDNMALAKAKNGEDIADKAQFIENLGVRSSFSGVIGMTRNATMNIPSASSSATFTADEIIVGTALGGNQYRIGLFKKTIDLTKNGVGGMDTGTVPDEGFVGIYAIYNPATMASGLLTVNATSVKLPEIYNGTNMPDGYTASALLTVVPVKAGKFTVLSVFGRQVHIPGVRVYSGLPNTSGVDIPVSKFIPLNTRTISGVLRQSSTGDGLLSITVSSNLSPVSGQQMTNYVFANMEVSNNYADILIVDEGHIVAAASNATSGNATVIVVISKYAI
SIO_010081: DDA3937_RS23535
subclass of: SO_0000673
so part of: DDA3937_RS23535
location: 186067..187344
location: region:186067-187344:1
so has part: feature:186067-187344:1:exon

WP_237703441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186067-187344:1:exon

DDA3937_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00800
old locus tag: Dda3937_03057
so part of: sequence
location: 187676..188968
location: region:187676-188968:1
so has part: feature:187676-188968:1:exon
subclass of: SO_0000010

9731552
type: Gene
SIO_000068: ncbigene

position:187676:1
position: 187676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188968:1
position: 188968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187676-188968:1:exon

DDA3937_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00800
old locus tag: Dda3937_03057
function: 8.1 extrachromosomal; prophage genes and phage related functions
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942819.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MGIKYVTLLTRVGEVKLAASISTGKPLQIAQMGVGDGGGTLPTPDATQTKLVNEKRRGAINSLTIDPNNTNQIIAEQVIPENEGGFWLREIGLYDVDGDLIAVGNCPETYKPELKEGSGRVQTVRMILIVSHTDAVMMTFDPTVALASRQYVDDKTLSSLAYTDTNVIEVKSYTDNLLAEHIAAADPHKQYAPIDSPVFVGNPTAPTPPFFDADTSIATTAFVQRALGNMKSAFGVRENKVLTSDAFGCFIESQIAGITITLPDASLCPGGVIEFNNISNGTVTVSGAGVDILGPNNPSGSKTLKIQSGVNVKFLSTGPQWRAIGGVGIAGAGLNGYQVLPSGIIIQWGVGKTLAAGVINQTFPIVYPNNFFSVVITENNSVGWNYTGVTVYGQSNSTKEMLKGYGAFVRNGGSVEFSSDISYQFIAIGN
SIO_010081: DDA3937_RS00800
subclass of: SO_0000673
so part of: DDA3937_RS00800
location: 187676..188968
location: region:187676-188968:1
so has part: feature:187676-188968:1:exon

WP_013315872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187676-188968:1:exon

DDA3937_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00805
old locus tag: Dda3937_03058
so part of: sequence
location: 188977..189354
location: region:188977-189354:1
so has part: feature:188977-189354:1:exon
subclass of: SO_0000010

9731553
type: Gene
SIO_000068: ncbigene

position:188977:1
position: 188977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189354:1
position: 189354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188977-189354:1:exon

DDA3937_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00805
old locus tag: Dda3937_03058
function: 8.1 extrachromosomal; prophage genes and phage related functions
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848320.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tail fiber assembly protein
translation: MFYSKSNSGFYSKDVNGANIPDDAVEISDDYYQHLLNEQALGNTIIFDELAKKPIAVTPAPVSETQLAEAARRQRDNLLIASDWTQVPDAPVDQQAWRSYRAILRQVPEQTGFPHNVEWPVSPGK
SIO_010081: DDA3937_RS00805
subclass of: SO_0000673
so part of: DDA3937_RS00805
location: 188977..189354
location: region:188977-189354:1
so has part: feature:188977-189354:1:exon

WP_013315873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188977-189354:1:exon

DDA3937_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00810
old locus tag: Dda3937_04432
so part of: sequence
location: 189606..190790
location: region:189606-190790:1
so has part: feature:189606-190790:1:exon
subclass of: SO_0000010

9731554
type: Gene
SIO_000068: ncbigene

position:189606:1
position: 189606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190790:1
position: 190790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189606-190790:1:exon

DDA3937_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00810
old locus tag: Dda3937_04432
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012769544.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MAVKYMALLTHVGATKLANAAALRKVLDITHIGVGDGGGNPTTPDPAQTTLVNEKRRAPLNYLSVDPANPNQIIAEQVIPENEGGFWLREIGLYDADGDLIAVANCPETYKPELKEGSGRVQTVRMILIVSHTDAVALKFDPAVALASRQYVDDKTLSSLAYTDTNVIEVKSYADKLLAEHIAATNPHKQYAPIVSPALTGIPTAPTAVAGTNTTQLATTAFVAGAIDLLSGKTDNNVKLKLDINDIVGIPLPWPQATAPAGWLKCNGQAFDKNRYPRLAQVYPSGVLPDLRGEFIRGWDDGRGVDTGRAILSAQTGSLIVGDIANNINMATLNNVGEAATKANVGWDTAELTSAKYPSIRVNVVSGQTATDPYPYCGVARPRNLAFNYIVRAA
SIO_010081: DDA3937_RS00810
subclass of: SO_0000673
so part of: DDA3937_RS00810
location: 189606..190790
location: region:189606-190790:1
so has part: feature:189606-190790:1:exon

WP_033111513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189606-190790:1:exon

DDA3937_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00815
old locus tag: Dda3937_04433
so part of: sequence
location: 190790..191410
location: region:190790-191410:1
so has part: feature:190790-191410:1:exon
subclass of: SO_0000010

9731555
type: Gene
SIO_000068: ncbigene

position:191410:1
position: 191410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190790-191410:1:exon

DDA3937_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00815
old locus tag: Dda3937_04433
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886587.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tail fiber assembly protein
translation: MTVPTQEACAMLTAEGLASRAGWLRVYHADTVTREYDGYSEEYLMLGTGIPAHSYADGPSQSVAEGRTLRRSSDGLRWELIPDLRGRTVYDTQTRQPQVVSELGPLSTSLTLLPPANEFDCWNGVQWVTDIVAHQASLAQSARQERDTRRQVAHDRIRELTYAQELEMATEQEIRALKDWKIYLVQLSHIDPTHAPDIDWPIIPTN
SIO_010081: DDA3937_RS00815
subclass of: SO_0000673
so part of: DDA3937_RS00815
location: 190790..191410
location: region:190790-191410:1
so has part: feature:190790-191410:1:exon

WP_033111514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190790-191410:1:exon

DDA3937_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00820
old locus tag: Dda3937_04434
so part of: sequence
location: 191715..193073
location: region:191715-193073:1
so has part: feature:191715-193073:1:exon
subclass of: SO_0000010

9731556
type: Gene
SIO_000068: ncbigene

position:191715:1
position: 191715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193073:1
position: 193073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191715-193073:1:exon

DDA3937_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00820
old locus tag: Dda3937_04434
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886586.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MGTKYFTLLTQMGEKKLAAAIAAGKPLELVQMGVGDGNGVLPAPDSVQTRLVNERRRGAINSLTVDPDNASQMIAEQVIPENEGGFWLREIGLYDVDGDLIAVGNCPETYKPELKEGSGRVQTVRMILIVSRTDAVTLKFDPTVALATRRYADTLLADHVAAMNPHKQYAPIESPVFTGNPAAPTPTAGDNSKKLATTEFVAVGLSGKMDRNQNGADIQDPVQFVKNLGLESRFAGRILRIKKITSSQNYQWPDDVSAIDVTICGAGGGGGAAAASAQNYHSAGSGGGAGGWARSFYRKGDIPALIYLEVGAGGIGGVDATYEPGLGGVTKFGTLMTANGGSRGANGIAIAIGMSVLIGNGGGGNASGGNLVAGFGGSGTPAMFFNSGYESGAGGDSVFSFGVPPIASNAPIGGFDGVDGAGGSGGYTVPAGASAKGGNGGNGVIMIVEYSA
SIO_010081: DDA3937_RS00820
subclass of: SO_0000673
so part of: DDA3937_RS00820
location: 191715..193073
location: region:191715-193073:1
so has part: feature:191715-193073:1:exon

WP_033111515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191715-193073:1:exon

DDA3937_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00825
old locus tag: Dda3937_03863
so part of: sequence
location: 193070..193465
location: region:193070-193465:1
so has part: feature:193070-193465:1:exon
subclass of: SO_0000010

9731557
type: Gene
SIO_000068: ncbigene

position:193070:1
position: 193070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193465:1
position: 193465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193070-193465:1:exon

DDA3937_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00825
old locus tag: Dda3937_03863
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886585.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tail fiber assembly protein
translation: MSKIYAVIENGVVINTVVWDSDVEADWKPQNGALIDISSERVGVGYLYSDGVFTPPEKRRDEYIADATLRKTQLLSEAQKAIANWQTDLLLGIISDDDKNRLARWREYMKQIDAIDVQTAPAINWPIPPAP
SIO_010081: DDA3937_RS00825
subclass of: SO_0000673
so part of: DDA3937_RS00825
location: 193070..193465
location: region:193070-193465:1
so has part: feature:193070-193465:1:exon

WP_013315877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193070-193465:1:exon

DDA3937_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00830
old locus tag: Dda3937_03864
so part of: sequence
location: complement(193462..193926)
location: region:193462-193926:-1
so has part: feature:193462-193926:-1:exon
subclass of: SO_0000010

9731558
type: Gene
SIO_000068: ncbigene

position:193462:-1
position: 193462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193926:-1
position: 193926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193462-193926:-1:exon

DDA3937_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00830
old locus tag: Dda3937_03864
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007727741.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUDIX domain-containing protein
translation: MKRRPASRLLILDPEQRVLLFLFHHTRDALAGERYWATPGGAVESGETFEQAAVRELWEETGIRRQDPGPSLAAQTFNMAMPNGDTVIADERFFVIRVADSAIHTDAWTAHEREVMRDHHWWSRDELLATQDQVYPEQLVEMLWPATGKASTSS
SIO_010081: DDA3937_RS00830
subclass of: SO_0000673
so part of: DDA3937_RS00830
location: complement(193462..193926)
location: region:193462-193926:-1
so has part: feature:193462-193926:-1:exon

WP_033111516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193462-193926:-1:exon

DDA3937_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00835
old locus tag: Dda3937_03865
so part of: sequence
location: 194129..194599
location: region:194129-194599:1
so has part: feature:194129-194599:1:exon
subclass of: SO_0000010

9731559
type: Gene
SIO_000068: ncbigene

position:194129:1
position: 194129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194599:1
position: 194599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194129-194599:1:exon

DDA3937_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00835
old locus tag: Dda3937_03865
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019846429.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2TM domain-containing protein
translation: MNTIKSQRLARAWSQEQLAELSALSVRTIQRIENGERASLETLSAIAAAFGVNVTALMEEGSEQAVSGESLAQRIEQARTQVGQESRFWRGLMLFVPVNALLVAINLLVNPQTHWFLWPLLIWGGVLAIRAARVFWLRDRWSRWEQERLQKILRKP
SIO_010081: DDA3937_RS00835
subclass of: SO_0000673
so part of: DDA3937_RS00835
location: 194129..194599
location: region:194129-194599:1
so has part: feature:194129-194599:1:exon

WP_013315879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194129-194599:1:exon

DDA3937_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: fieF
locus tag: DDA3937_RS00840
old locus tag: Dda3937_03866
so part of: sequence
location: 194729..195631
location: region:194729-195631:1
so has part: feature:194729-195631:1:exon
subclass of: SO_0000010

9731560
type: Gene
SIO_000068: ncbigene

position:194729:1
position: 194729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195631:1
position: 195631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194729-195631:1:exon

DDA3937_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: fieF
locus tag: DDA3937_RS00840
old locus tag: Dda3937_03866
function: 0.1 unknown function; conserved hypothetical product
function: 4.2.A.4 transport; Electrochemical potential driven transporters; Porters (Uni-, Sym- and Antiporters); The Cation Diffusion Facilitator (CDF) Family
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004107519.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: FieF, a metal efflux transporter, is a member of the CDF (cation diffusion facilitator) family of transporters.; FieF, a metal efflux transporter, is a member of the CDF (cation diffusion facilitator) family of transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDF family cation-efflux transporter FieF
translation: MNSHYARLVMTAAFLATATALSLFGMKVYAWWYTGSVSLLASLVDSLVDIAASLVNLLVVRYSLQPADTEHTFGHGKAESLAALAQSMFISGSALFLLLTGAQHLITPQPLQGPELGMWITIIALVATGLLVSFQRWVIRKTHSQAVRADMLHYQSDVLMNGAILLSLALSWKGINWADAVFALGIGVYILGSALRMAYEAIQALLDRALPDEERQEIINIVSSWPGVSGAHQLRTRRSGPTRFIQLHLEMADNLPLVESHQIADELEQALLKRFPGSDVIIHQDPVSVVPQEQRGRWVL
SIO_010081: DDA3937_RS00840
subclass of: SO_0000673
so part of: DDA3937_RS00840
location: 194729..195631
location: region:194729-195631:1
so has part: feature:194729-195631:1:exon

WP_013315880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194729-195631:1:exon

DDA3937_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: pfkA
locus tag: DDA3937_RS00845
old locus tag: Dda3937_03867
so part of: sequence
location: 195878..196840
location: region:195878-196840:1
so has part: feature:195878-196840:1:exon
subclass of: SO_0000010

9731561
type: Gene
SIO_000068: ncbigene

position:195878:1
position: 195878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196840:1
position: 196840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195878-196840:1:exon

DDA3937_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: pfkA
locus tag: DDA3937_RS00845
old locus tag: Dda3937_03867
EC number: 2.7.1.11
function: 1.3.1 metabolism; energy metabolism, carbon; glycolysis
function: 1.1.1 metabolism; carbon utilization; carbon compounds
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-phosphofructokinase
translation: MIKKIGVLTSGGDAPGMNAAIRGVVRAGLAENLDVYGIYDGYLGLYEDRMVQLDRYSVSDVINRGGTFLGSARFPAFREEAVRQVCVENMKKRGLDALVVIGGDGSYMGAKRLTEMGFPCIGLPGTIDNDVAGTDYTIGYFTALETVVEAIDRLRDTSSSHQRISIVEVMGRHCGDLTLAAAIAGGCEFIVLPEVDFKPEDLVEEIKAGIAKGKKHAIVAITELVCDVDELARYIEQETERETRATVLGHIQRGGSPVAYDRILASRMGAYSIELLQQGYGGRCVGIQNEKLVHHDIIDAIENMKRPFKGDWLNTAKKLF
SIO_010081: DDA3937_RS00845
subclass of: SO_0000673
so part of: DDA3937_RS00845
location: 195878..196840
location: region:195878-196840:1
so has part: feature:195878-196840:1:exon

WP_013315881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195878-196840:1:exon

DDA3937_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: aguB
locus tag: DDA3937_RS00850
old locus tag: Dda3937_03868
so part of: sequence
location: 197176..198060
location: region:197176-198060:1
so has part: feature:197176-198060:1:exon
subclass of: SO_0000010

9731562
type: Gene
SIO_000068: ncbigene

position:197176:1
position: 197176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198060:1
position: 198060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197176-198060:1:exon

DDA3937_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: aguB
locus tag: DDA3937_RS00850
old locus tag: Dda3937_03868
EC number: 3.5.1.53
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005192514.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0050126 - N-carbamoylputrescine amidase activity [Evidence IEA]
GO process: GO:0009446 - putrescine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-carbamoylputrescine amidase
translation: MTKVTVAATQMACTWDLPKNIENAERLVRQAHAQGAQIILIQELFAAPYFCIDQSPEHYALAQELATSPLIKHFSALAAELEVVLPLSLFERANNAYYNSLVMIDADGSVLDVYRKTHIPNGPAYQEKQFFIPGDTGFKVWQTRYAKVGVGICWDQWFPETARCLALNGAELIFYPTAIGSEPAYPDIDSQPHWTRVQQGHAAANLVPVIASNRIGTEASKYIDGLEMTFYGSSFIADQTGALVAQANKTDEAVLVHEFDLDAIAAQRASWGLFRDRRPDMYGVIGTSDGKTWR
SIO_010081: DDA3937_RS00850
subclass of: SO_0000673
so part of: DDA3937_RS00850
location: 197176..198060
location: region:197176-198060:1
so has part: feature:197176-198060:1:exon

WP_013315882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197176-198060:1:exon

DDA3937_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: aguA
locus tag: DDA3937_RS00855
old locus tag: Dda3937_03869
so part of: sequence
location: 198064..199164
location: region:198064-199164:1
so has part: feature:198064-199164:1:exon
subclass of: SO_0000010

9731563
type: Gene
SIO_000068: ncbigene

position:198064:1
position: 198064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199164:1
position: 199164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198064-199164:1:exon

DDA3937_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: aguA
locus tag: DDA3937_RS00855
old locus tag: Dda3937_03869
EC number: 3.5.3.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012772894.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0047632 - agmatine deiminase activity [Evidence IEA]
GO process: GO:0009446 - putrescine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: agmatine deiminase
translation: MSELTTPLQDGFSMPAEWAPHDAVWMLWPYRRDNWRSQGDAIPAQRTFAAVAAAIAQTTPVIMGVPRDQMALAKSVMPAGVTLVEMESDDAWMRDTGPTVVLNDAGERRGVDWQFNAWGGALGGLYEDWRRDEKVAAQVLAYHGDARYAAPLILEGGSIHTDGEGTLLTTAECLLNPNRNPHLNKAQIEQLLRDYLGVSAFIWLEEGVYNDETDGHIDNMCCFVRPGEVALHWTDDETDPQYARSQAAYQVLSQAKDAQGRSLKIWKLPAPGPLYATPEEAAGVTDGNAIERNAGSRLAGSYVNFLISNQQIIYPLLDERTDAEAHALLQQMFPGYLVSGVPAREILLGGGNIHCITQQIPAAKTV
SIO_010081: DDA3937_RS00855
subclass of: SO_0000673
so part of: DDA3937_RS00855
location: 198064..199164
location: region:198064-199164:1
so has part: feature:198064-199164:1:exon

WP_033111517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198064-199164:1:exon

DDA3937_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: phoA
locus tag: DDA3937_RS00860
old locus tag: Dda3937_03870
so part of: sequence
location: complement(199259..200698)
location: region:199259-200698:-1
so has part: feature:199259-200698:-1:exon
subclass of: SO_0000010

9731564
type: Gene
SIO_000068: ncbigene

position:199259:-1
position: 199259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200698:-1
position: 200698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199259-200698:-1:exon

DDA3937_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: phoA
locus tag: DDA3937_RS00860
old locus tag: Dda3937_03870
EC number: 3.1.3.1
function: 1.8.1 metabolism; metabolism of other compounds; phosphorous metabolism
function: 7.2 location of gene products; periplasmic space
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019846434.1
GO function: GO:0016791 - phosphatase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alkaline phosphatase
translation: MTMTRKALIRKTLICKPLLSSLMMTLIAGSALAASADYHRQAQGDITQPGGARRLSADQTEMLKASLNAKTAKNVILLIGDGMGDSEITAARNYALGAGGFFKGIDALPLTGQYTHYSLDKKTRKPDYVTDSAASATAWSSGVKTYNGALGVDVDGKDHKTLIEIAKAAGKATGNVSTAELEDATPAAMVSHVTSRKCYGPEKTSQQCPTNALENGGRGSIAEQLLVTRADVTLGGGAATFKEIAKAGKYQGKSLKEQADALGYHLVTDLDGMNAITAASQSKPVLGLFADGNMPVRWQGPKASYHGNLDKPVVTCEPNAQRGAGVPTLAQMTDKAIQLLSKNKNGFFLQVEGASIDKQDHAANPCGQFGETVDLDEAVQKALEFARRDGNTLVIVTADHAHSSQIVENGSKAPGLTQALNTKDDAVMTISYGNSEEESQGHTGTQLRIAAYGPHAANVVGLTDQTDLFYTMKNAMGLK
SIO_010081: DDA3937_RS00860
subclass of: SO_0000673
so part of: DDA3937_RS00860
location: complement(199259..200698)
location: region:199259-200698:-1
so has part: feature:199259-200698:-1:exon

WP_013315884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199259-200698:-1:exon

DDA3937_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: tpiA
locus tag: DDA3937_RS00865
old locus tag: Dda3937_03871
so part of: sequence
location: complement(200851..201621)
location: region:200851-201621:-1
so has part: feature:200851-201621:-1:exon
subclass of: SO_0000010

9731565
type: Gene
SIO_000068: ncbigene

position:200851:-1
position: 200851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201621:-1
position: 201621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200851-201621:-1:exon

DDA3937_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: tpiA
locus tag: DDA3937_RS00865
old locus tag: Dda3937_03871
EC number: 5.3.1.1
function: 1.3.1 metabolism; energy metabolism, carbon; glycolysis
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886548.1
GO function: GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: triose-phosphate isomerase
translation: MRHPLVMGNWKLNGSTSMVHELIAGLRNELSAVTGCGVAIAPPAIYLDQAKHLLAGSRIALGAQNVDVNLAGAFTGETSAAMLKDIGAQYIIIGHSERRTYHHESDEFIAKKFAVLKETGLIPVLCIGETEAENEAGQTEAVCARQLDAVLNTLGAKAFENTVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKQDAAVAEQVIIQYGGSVNAANAAELFTQPDIDGALVGGASLKADAFAVIVKAAAEAKSQA
SIO_010081: DDA3937_RS00865
subclass of: SO_0000673
so part of: DDA3937_RS00865
location: complement(200851..201621)
location: region:200851-201621:-1
so has part: feature:200851-201621:-1:exon

WP_013315885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200851-201621:-1:exon

DDA3937_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00870
old locus tag: Dda3937_03872
so part of: sequence
location: complement(201763..202359)
location: region:201763-202359:-1
so has part: feature:201763-202359:-1:exon
subclass of: SO_0000010

9731566
type: Gene
SIO_000068: ncbigene

position:201763:-1
position: 201763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202359:-1
position: 202359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201763-202359:-1:exon

DDA3937_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00870
old locus tag: Dda3937_03872
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886547.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1454 family protein
translation: MMKNALLIVCCLSAGLLCTPFARSDGLFQQKPPTAAPYLLSGSPTFDMNIIQFRTRYNLSNPSLPINEYRVIDTGDDSPNLTRAASRINDHLYSSTALEKGTGKIKTMQITWLPKPKDTDQSGRRKQAIGYMAALVRTFMPSLTNEQSLKKIEMLLEKGKGQRFYQQTEGALRYVVADHGEKGLTFAVEPIKLALSDS
SIO_010081: DDA3937_RS00870
subclass of: SO_0000673
so part of: DDA3937_RS00870
location: complement(201763..202359)
location: region:201763-202359:-1
so has part: feature:201763-202359:-1:exon

WP_033111518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201763-202359:-1:exon

DDA3937_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00875
old locus tag: Dda3937_03873
so part of: sequence
location: 202504..202929
location: region:202504-202929:1
so has part: feature:202504-202929:1:exon
subclass of: SO_0000010

9731567
type: Gene
SIO_000068: ncbigene

position:202504:1
position: 202504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202929:1
position: 202929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202504-202929:1:exon

DDA3937_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00875
old locus tag: Dda3937_03873
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315887.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF805 domain-containing protein
translation: MTIQQWCFSFRGRVGRRDFWLGMAIVLALMVGLFMLAGTGWLETQNAAFVLVVLMWPLAAILVKRLHDRNKSGWWALLLVVAWMLGNGNWAMLPPLGQWGLGRFLPTLIAVMMLLDCGAFVGTSGANRFGPAAEPLRLRAS
SIO_010081: DDA3937_RS00875
subclass of: SO_0000673
so part of: DDA3937_RS00875
location: 202504..202929
location: region:202504-202929:1
so has part: feature:202504-202929:1:exon

WP_013315887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202504-202929:1:exon

DDA3937_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: fpr
locus tag: DDA3937_RS00880
old locus tag: Dda3937_03874
so part of: sequence
location: complement(202943..203689)
location: region:202943-203689:-1
so has part: feature:202943-203689:-1:exon
subclass of: SO_0000010

9731568
type: Gene
SIO_000068: ncbigene

position:202943:-1
position: 202943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203689:-1
position: 203689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202943-203689:-1:exon

DDA3937_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: fpr
locus tag: DDA3937_RS00880
old locus tag: Dda3937_03874
EC number: 1.18.1.2
function: 5.5.6 cell processes; adaptation to stress; other (mechanical, nutritional, oxidative stress)
function: 1.4.3 metabolism; energy production/transport; electron carrier
function: 1.7.1 metabolism; central intermediary metabolism; unassigned reversible reactions
function: 5.6.2 cell processes; protection; detoxification (xenobiotic metabolism)
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002208956.1
GO function: GO:0004324 - ferredoxin-NADP+ reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin--NADP(+) reductase
translation: MAEWVTGKVIQVEHWTENLFSLRLEAPVAPFTAGQFAKLALELGGERVQRAYSYVNAPSDTLLEFYLVNVPDGKLSPHLHRCQPGDEVLVTQEAAGFFVLGEIPDCDTLWMLATGTAIGPYLSILQEGRGLERFKHIVLVHAARFARDLSFLPLMQQLEQRYDGKLRIQTVVSREEQPGSLTGRVPALIESGALEAAVGLSMDAATSHVMLCGNPQMVRDTQQLLKDTRQMSKHLRRRPGHMTSEHYW
SIO_010081: DDA3937_RS00880
subclass of: SO_0000673
so part of: DDA3937_RS00880
location: complement(202943..203689)
location: region:202943-203689:-1
so has part: feature:202943-203689:-1:exon

WP_013315888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202943-203689:-1:exon

DDA3937_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: glpX
locus tag: DDA3937_RS00885
old locus tag: Dda3937_03875
so part of: sequence
location: complement(203799..204809)
location: region:203799-204809:-1
so has part: feature:203799-204809:-1:exon
subclass of: SO_0000010

9731569
type: Gene
SIO_000068: ncbigene

position:203799:-1
position: 203799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204809:-1
position: 204809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203799-204809:-1:exon

DDA3937_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: glpX
locus tag: DDA3937_RS00885
old locus tag: Dda3937_03875
EC number: 3.1.3.11
function: 1.7.6 metabolism; central intermediary metabolism; glycerol metabolism
function: 7.1 location of gene products; cytoplasm
function: 1.7.8 metabolism; central intermediary metabolism; gluconeogenesis
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015379418.1
GO function: GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class II fructose-bisphosphatase
translation: MKRELAIEFSRVTEAAALAGYKWLGRGDKNAADNAAVQAMRIMLNQVDINGQIVIGEGEIDEAPMLYIGEQVGTGRGDAVDIAVDPIEGTRMTAMGQANALAVLAVGEQGTFLHAPDMYMEKLIVGPQAKGAIDLDRPLEDNLKRVAERLGKPLSELTVITLAKPRHDRVIADMQRLGVKVFAIPDGDVAASILTCMPESEVDVLYGIGGAPEGVISAAVIRALDGDMQGRLLARHQVKEDNAENRRLGEQELARCREMGIEAGKVLMLDDMARNDNVIFSATGITKGDLLDGISRRGNIATTETLLIRGKSRTIRRISSTHYLDRKDQALHAFLL
SIO_010081: DDA3937_RS00885
subclass of: SO_0000673
so part of: DDA3937_RS00885
location: complement(203799..204809)
location: region:203799-204809:-1
so has part: feature:203799-204809:-1:exon

WP_013315889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203799-204809:-1:exon

DDA3937_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: glpK
locus tag: DDA3937_RS00890
old locus tag: Dda3937_03876
so part of: sequence
location: complement(204941..206452)
location: region:204941-206452:-1
so has part: feature:204941-206452:-1:exon
subclass of: SO_0000010

9731570
type: Gene
SIO_000068: ncbigene

position:204941:-1
position: 204941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206452:-1
position: 206452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204941-206452:-1:exon

DDA3937_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: glpK
locus tag: DDA3937_RS00890
old locus tag: Dda3937_03876
EC number: 2.7.1.30
function: 3.1.4 regulation; type of regulation; regulation level unknown
function: 1.7.6 metabolism; central intermediary metabolism; glycerol metabolism
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886543.1
GO function: GO:0004370 - glycerol kinase activity [Evidence IEA]
GO process: GO:0006071 - glycerol metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol kinase GlpK
translation: MNQEKKYIVALDQGTTSSRAVVLDHDANIVSVSQREFTQIYPKAGWVEHDPMEIWASQSSTLVEALAKAGISSDEVAGIGITNQRETAVVWEKDTGKPIYNAIVWQCRRSADICEKLKKDGLEEYIRANTGLVVDPYFSGTKVKWILDHVEGSRERARRGELLFGTIDTWLIWKMTQGRVHVTDYTNASRTMLFNIHKLDWDERMLEVLDIPRAMLPQVRPSSEIYGQTNIGGKGGTRIPIAGIAGDQQAALYGQLCVHPGMAKNTYGTGCFLLMNTGTEAVRSRHGLLTTIACGPRGEVNYALEGAVFIGGASIQWLRDELKLIGDAMDSEYFATKVKDSNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLDAMQADADTRLQSLRVDGGAVANNFLMQFQSDILGTRVERPQVRESTALGAAFLAGLATGFWNDLDEVKSKTAIEREFRPSIETVERNFRYRGWQKAVERARAWEEHDE
SIO_010081: DDA3937_RS00890
subclass of: SO_0000673
so part of: DDA3937_RS00890
location: complement(204941..206452)
location: region:204941-206452:-1
so has part: feature:204941-206452:-1:exon

WP_013315890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204941-206452:-1:exon

DDA3937_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00895
old locus tag: Dda3937_03877
so part of: sequence
location: complement(206480..207331)
location: region:206480-207331:-1
so has part: feature:206480-207331:-1:exon
subclass of: SO_0000010

9731571
type: Gene
SIO_000068: ncbigene

position:206480:-1
position: 206480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207331:-1
position: 207331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206480-207331:-1:exon

DDA3937_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00895
old locus tag: Dda3937_03877
function: 7.3 location of gene products; inner membrane
function: 1.7.6 metabolism; central intermediary metabolism; glycerol metabolism
function: 4.S.77 transport; substrate; glycerol
function: 1.5.4 metabolism; building block biosynthesis; fatty acid and phosphatidic acid
function: 4.1.A.8 transport; Channel-type Transporters; alpha-type channels; The Major Intrinsic protein (MIP) Family
function: 6.1 cell structure; membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886542.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MIP/aquaporin family protein
translation: MSQSELSTLKGQCIAEFLGTGLLIFFGVGCVAALKLAGASLGLWEISIIWGLGVAMAIYLTAAISGAHLNPAVTIALWLFACFDGRKVLPYIVSQVAGAFCSAALVYGLYHNLFDNIEQTHNMVRGSVESLDLAGIFSTYPNPHISVLQAFLVETVITAILMCLILALTDDGNGIPRGPLAPLLIGILIAIIGASMGPLTGFAMNPARDAGPKLFAYFAGWGKIALTGGRDIPYILIPIFGPIVGACLGAFGYRSLIGRNLPCDVCATDTDTDTAASAQTRKV
SIO_010081: DDA3937_RS00895
subclass of: SO_0000673
so part of: DDA3937_RS00895
location: complement(206480..207331)
location: region:206480-207331:-1
so has part: feature:206480-207331:-1:exon

WP_013315891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206480-207331:-1:exon

DDA3937_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: zapB
locus tag: DDA3937_RS00900
old locus tag: Dda3937_03879
so part of: sequence
location: 207918..208160
location: region:207918-208160:1
so has part: feature:207918-208160:1:exon
subclass of: SO_0000010

9731573
type: Gene
SIO_000068: ncbigene

position:207918:1
position: 207918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208160:1
position: 208160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207918-208160:1:exon

DDA3937_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: zapB
locus tag: DDA3937_RS00900
old locus tag: Dda3937_03879
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012368679.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO process: GO:0090529 - cell septum assembly [Evidence IEA]; GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein ZapB
translation: MSFEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNTLSQEVESMAGNRDALMRENEQLKQEQLVWQERLRALLGKMEDVQ
SIO_010081: DDA3937_RS00900
subclass of: SO_0000673
so part of: DDA3937_RS00900
location: 207918..208160
location: region:207918-208160:1
so has part: feature:207918-208160:1:exon

WP_013315893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207918-208160:1:exon

DDA3937_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rraA
locus tag: DDA3937_RS00905
old locus tag: Dda3937_03880
so part of: sequence
location: complement(208226..208711)
location: region:208226-208711:-1
so has part: feature:208226-208711:-1:exon
subclass of: SO_0000010

9731574
type: Gene
SIO_000068: ncbigene

position:208226:-1
position: 208226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208711:-1
position: 208711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208226-208711:-1:exon

DDA3937_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rraA
locus tag: DDA3937_RS00905
old locus tag: Dda3937_03880
function: 1.5.3.11 metabolism; building block biosynthesis; cofactor, small molecule carrier; menaquinone, ubiquinone
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1
GO function: GO:0008428 - ribonuclease inhibitor activity [Evidence IEA]
GO process: GO:0051252 - regulation of RNA metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease E activity regulator RraA
translation: MKYDTSELCDIYHEEVNVVEPLFSNFGGRSSFGGKIITVKCFEDNGLLFDVLEENGSGRVLLVDGGGSVRRALVNAELARLATQNEWEGIVVYGAVRQVDDLSELDIGIQAMAATPAGAASEGIGETDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDLE
SIO_010081: DDA3937_RS00905
subclass of: SO_0000673
so part of: DDA3937_RS00905
location: complement(208226..208711)
location: region:208226-208711:-1
so has part: feature:208226-208711:-1:exon

WP_013315894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208226-208711:-1:exon

DDA3937_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00910
old locus tag: Dda3937_03881
so part of: sequence
location: complement(208870..209787)
location: region:208870-209787:-1
so has part: feature:208870-209787:-1:exon
subclass of: SO_0000010

9731575
type: Gene
SIO_000068: ncbigene

position:208870:-1
position: 208870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209787:-1
position: 209787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208870-209787:-1:exon

DDA3937_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00910
old locus tag: Dda3937_03881
EC number: 2.5.1.74
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014917000.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0046428 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity [Evidence IEA]
GO process: GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1,4-dihydroxy-2-naphthoate polyprenyltransferase
translation: MTQLTHSSKTQAWLDSLRPKTLPLAFASIVTGTVIACWHSNFKPGVALLTLITAGLLQILSNLANDYGDAVKGSDKEDRIGPLRGIQTGAISLPELRKALLITVTLTAISGSALVALACEKPVDIVVFLALGLLAILAAITYTVGNKPYGYIGLGDISVLIFFGWLSVAGSYYLQTGHFDSSVILPATACGLLAVAVLNINNLRDIDSDRENGKNTLAVRLGAHKARRYHMVLLMTAPVCLALFAMLYLHTLAGWLFILALPLLVKQGRYVMRETTAFSMRPMLEKTVKGALLTNLLFAVGVLLS
SIO_010081: DDA3937_RS00910
subclass of: SO_0000673
so part of: DDA3937_RS00910
location: complement(208870..209787)
location: region:208870-209787:-1
so has part: feature:208870-209787:-1:exon

WP_033111519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208870-209787:-1:exon

DDA3937_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: hslU
locus tag: DDA3937_RS00915
old locus tag: Dda3937_03882
so part of: sequence
location: complement(209945..211276)
location: region:209945-211276:-1
so has part: feature:209945-211276:-1:exon
subclass of: SO_0000010

9731576
type: Gene
SIO_000068: ncbigene

position:209945:-1
position: 209945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211276:-1
position: 211276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209945-211276:-1:exon

DDA3937_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: hslU
locus tag: DDA3937_RS00915
old locus tag: Dda3937_03882
EC number: 3.4.25.2
function: 5.5.2 cell processes; adaptation to stress; temperature extremes
function: 7.1 location of gene products; cytoplasm
function: 2.3.6 information transfer; protein related; turnover, degradation
function: 2.3.4 information transfer; protein related; chaperoning, folding
function: 3.1.3.4 regulation; type of regulation; posttranscriptional; proteases, cleavage of compounds
function: 5.1 cell processes; cell division
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HslU--HslV peptidase ATPase subunit
translation: MSEMTPREIVSELDSYIIGQHKAKRAVAIALRNRWRRMQLEESLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDVAIKMVRQQSMEKNRYRAEELAEERILDVLIPPAKNNWGQPEENHEPSAARQAFRKKLREGSLDDKEIEIELAAAPVGVEIMAPPGMEEMTNQLQSMFQNLAGQKQKNRKIKIREAFKLLVEEEAAKLVNPEELKQQAIEAVEQHGIVFIDEIDKICKRGDTSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQVASPSDLIPELQGRLPIRVELQALTTEDFERILTEPSASLTRQYQALMETEGVNITFLPDGIRRIAEAAWQVNERTENIGARRLHTVLERLIEDVSYGASEMHGQTVTIDADYVRSHLDELVADEDLSRFIL
SIO_010081: DDA3937_RS00915
subclass of: SO_0000673
so part of: DDA3937_RS00915
location: complement(209945..211276)
location: region:209945-211276:-1
so has part: feature:209945-211276:-1:exon

WP_013315896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209945-211276:-1:exon

DDA3937_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: hslV
locus tag: DDA3937_RS00920
old locus tag: Dda3937_03883
so part of: sequence
location: complement(211286..211816)
location: region:211286-211816:-1
so has part: feature:211286-211816:-1:exon
subclass of: SO_0000010

9731577
type: Gene
SIO_000068: ncbigene

position:211286:-1
position: 211286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211816:-1
position: 211816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211286-211816:-1:exon

DDA3937_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: hslV
locus tag: DDA3937_RS00920
old locus tag: Dda3937_03883
EC number: 3.4.25.2
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312886.1
GO function: GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO process: GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent protease subunit HslV
translation: MTTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELFERKLELHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVIQPENDLIAIGSGGPYAQAAARALLENTELSAREIVEKSLGIAGDICIYTNQFHTIEELASKA
SIO_010081: DDA3937_RS00920
subclass of: SO_0000673
so part of: DDA3937_RS00920
location: complement(211286..211816)
location: region:211286-211816:-1
so has part: feature:211286-211816:-1:exon

WP_012767897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211286-211816:-1:exon

DDA3937_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ftsN
locus tag: DDA3937_RS00925
old locus tag: Dda3937_03884
so part of: sequence
location: complement(211902..212831)
location: region:211902-212831:-1
so has part: feature:211902-212831:-1:exon
subclass of: SO_0000010

9731578
type: Gene
SIO_000068: ncbigene

position:211902:-1
position: 211902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212831:-1
position: 212831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211902-212831:-1:exon

DDA3937_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ftsN
locus tag: DDA3937_RS00925
old locus tag: Dda3937_03884
function: 5.1 cell processes; cell division
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002208941.1
GO process: GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsN
translation: MAQRDYVSRGRSGTRRKKTSSRKRGGSSGASKTMIALAVAVLVTFAGGLYFIAHNKPDESPVLPHQGTKGNGLPPKPEERWRYIKELENRQIGVASPTEPSAGGEIQSTGQLTNEQRQLLEQMQSDMKRQPTTLTEVPYNDQSQMPARSLAAPRPQTVVPIVPNTSTVTPPPAPRTTTTVPANQHHTTQAATPPAQTAQKPVQAEPRKEAAKTETAAKETAKTDSKTENAKPEKEQRWMVQCGSFKTAEPAESVRAELAFAGVESRIASSGGWHRIMLGPYNSRTVADKMAQKLKGMGQSNCIPLASGG
SIO_010081: DDA3937_RS00925
subclass of: SO_0000673
so part of: DDA3937_RS00925
location: complement(211902..212831)
location: region:211902-212831:-1
so has part: feature:211902-212831:-1:exon

WP_013315897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211902-212831:-1:exon

DDA3937_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: cytR
locus tag: DDA3937_RS00930
old locus tag: Dda3937_03885
so part of: sequence
location: complement(212883..213953)
location: region:212883-213953:-1
so has part: feature:212883-213953:-1:exon
subclass of: SO_0000010

9731579
type: Gene
SIO_000068: ncbigene

position:212883:-1
position: 212883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213953:-1
position: 213953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212883-213953:-1:exon

DDA3937_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: cytR
locus tag: DDA3937_RS00930
old locus tag: Dda3937_03885
function: CytR controls the expression of genes involved in nucleoside catabolism and nucleotide transport
function: In E. carotovora subsp. carotovora EC1, a CytR homolog controls expression of polygalacturonase and flagella secretion genes.
function: 3.1.2.3 regulation; type of regulation; transcriptional level; repressor
function: 3.3.4 regulation; genetic unit regulated; global
function: 1.7.33 metabolism; central intermediary metabolism; nucleotide and nucleoside conversions
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.3.2 regulation; genetic unit regulated; regulon
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886536.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding transcriptional regulator CytR
translation: MEQKKFIPPATMKDVADQAGVSTATVSRALTNPEKVSATTRQKVEQAALAVGYSAQNLARNLKRHESRTILALVPDICDPFFTEMLRGIEETAAERGYLVLIGDCAHQRKTEKTFLDLITTRQIDGILLLGSQLPFDAGKDERRHLPPMVMANEFAPELDMPTVHIDNLTAAFEAVSYLNQLGHRRIACIAGPEQIPISEYRLQGYIQALRRCGLVIDNQYIVRGDFSYDTGSRGLMRLMSHPTPPTAVFCHCDVMALGALTQARKMGLDVPRDLSLVGFDDIAQASHCFPALTTVSQPRYDIGREAMLLLLAQLQQHKVQRGSRLISSQLIIRDSTAAPPLRVTGFKNSGAGQIF
SIO_010081: DDA3937_RS00930
subclass of: SO_0000673
so part of: DDA3937_RS00930
location: complement(212883..213953)
location: region:212883-213953:-1
so has part: feature:212883-213953:-1:exon

WP_013315898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212883-213953:-1:exon

DDA3937_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: priA
locus tag: DDA3937_RS00935
old locus tag: Dda3937_03886
so part of: sequence
location: complement(214389..216587)
location: region:214389-216587:-1
so has part: feature:214389-216587:-1:exon
subclass of: SO_0000010

9731580
type: Gene
SIO_000068: ncbigene

position:214389:-1
position: 214389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216587:-1
position: 216587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214389-216587:-1:exon

DDA3937_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: priA
locus tag: DDA3937_RS00935
old locus tag: Dda3937_03886
EC number: 3.6.1.-
function: 2.1.1 information transfer; DNA related; DNA replication
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005175847.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primosomal protein N'
translation: MPVVQVALPVPLTRTFDYRLPQGITPPVPGARVSVPFGNRKMIGIVTALSAGSALPLEQLKPLHDVLDDAPLFQDSLWHILLWAAEYYHYPLGDVLFHALPILLRQGKPAHSAPLWQWFATEQGRATPVNALKRAPKQQQALAALLQGPLYRHQVAETELTEAALQALREKGLSELRALPQQVRDWRDDFSLTGERLRLNTEQATAVGAIRSEDDHFAAWLLAGITGSGKTEVYLSVLENILAQGKQALVLVPEIGLTPQTIARFRDRFNAPVEALHSGLNDGERLSVWLRARQGEAAIVIGTRSALFTPFARLGLIVIDEEHDGSYKQQEGWRYHARDLAVFRARQEDIPIVMGSATPALETLYNVQIGKYRQLRLSKRAGNARLAQQHLLDLKGLPLTTGLSQPLISRIRHHLAADNQVILFLNRRGFAPVVLCHECGWIAECQRCDSYYTLHQHQRMMRCHHCDSQRPIPQQCPQCGSTHLVPVGLGTEQLEQALPALFPEAPITRIDRDTTSRKGALEQQLAQVRQGGARILIGTQMLAKGHHFPDVTLVALLDVDSSLFSADFRATERFAQLYTQVSGRAGRAGKAGEVVLQTHHPEHPLLQTLLHQGYDAFASQTLKERQSVFLPPFTSHVLFRADDHDNQQASLFLQQLRNLLEASPLRDDSLWLMGPVPALQPKRAGRFRWQLLLQHPSRATLQRLIRNSMPLIDTLPQTRKVKWVMDVDPTDN
SIO_010081: DDA3937_RS00935
subclass of: SO_0000673
so part of: DDA3937_RS00935
location: complement(214389..216587)
location: region:214389-216587:-1
so has part: feature:214389-216587:-1:exon

WP_013315899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214389-216587:-1:exon

DDA3937_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rpmE
locus tag: DDA3937_RS00940
old locus tag: Dda3937_04717
so part of: sequence
location: 216863..217078
location: region:216863-217078:1
so has part: feature:216863-217078:1:exon
subclass of: SO_0000010

9731581
type: Gene
SIO_000068: ncbigene

position:216863:1
position: 216863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217078:1
position: 217078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216863-217078:1:exon

DDA3937_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rpmE
locus tag: DDA3937_RS00940
old locus tag: Dda3937_04717
function: 2.3.8 information transfer; protein related; ribosomal proteins
function: 2.3.2 information transfer; protein related; translation
function: 6.6 cell structure; ribosome
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315900.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L31
translation: MKEGIHPNYVEITATCSCGNVIKTRSTAAHDLNLDVCGACHPFFTGKQRVVDTGGRVERFNKRFSVPGTKK
SIO_010081: DDA3937_RS00940
subclass of: SO_0000673
so part of: DDA3937_RS00940
location: 216863..217078
location: region:216863-217078:1
so has part: feature:216863-217078:1:exon

WP_013315900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216863-217078:1:exon

DDA3937_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: metJ
locus tag: DDA3937_RS00945
old locus tag: Dda3937_03887
so part of: sequence
location: complement(217195..217512)
location: region:217195-217512:-1
so has part: feature:217195-217512:-1:exon
subclass of: SO_0000010

9731582
type: Gene
SIO_000068: ncbigene

position:217195:-1
position: 217195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217512:-1
position: 217512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217195-217512:-1:exon

DDA3937_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: metJ
locus tag: DDA3937_RS00945
old locus tag: Dda3937_03887
function: MetJ controls the expression of the genes involved in methionine synthesis
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.3 regulation; type of regulation; transcriptional level; repressor
function: 1.5.1.9 metabolism; building block biosynthesis; amino acids; methionine
function: 3.3.1 regulation; genetic unit regulated; operon
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: met regulon transcriptional regulator MetJ
translation: MAEWNGEYVSPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPNDDDLRKERGDEIPDAAKAIMREMGIDPDTWEY
SIO_010081: DDA3937_RS00945
subclass of: SO_0000673
so part of: DDA3937_RS00945
location: complement(217195..217512)
location: region:217195-217512:-1
so has part: feature:217195-217512:-1:exon

WP_013315901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217195-217512:-1:exon

DDA3937_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: metB
locus tag: DDA3937_RS00950
old locus tag: Dda3937_03888
so part of: sequence
location: 217701..218861
location: region:217701-218861:1
so has part: feature:217701-218861:1:exon
subclass of: SO_0000010

9731583
type: Gene
SIO_000068: ncbigene

position:217701:1
position: 217701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218861:1
position: 218861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217701-218861:1:exon

DDA3937_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: metB
locus tag: DDA3937_RS00950
old locus tag: Dda3937_03888
EC number: 2.5.1.48
function: 1.5.1.9 metabolism; building block biosynthesis; amino acids; methionine
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019846445.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0019346 - transsulfuration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cystathionine gamma-synthase
translation: MTRKQATIAVRSGLNNDEQFGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVMTSSGMSAILLVCTVFLRPGDLLVAPHDCYGGSYRLFDSLSKRGAYRVKFVDQGNAADLKAALAEKPKLVLVESPSNPLLRVVDIAAICQAAREAGAVSVVDNTFLSPALQNPLKLGADLVVHSCTKYLNGHSDVVAGAVIARDPEVVTELAWWANNIGVTGAAFDSYLLLRGVRTLSPRMMIAQKNALQIVEYLRHQPLVKALYHPSLPGNAGHEIARRQQSGFGAMLSFELDGDEDTLRRFLSTLELFTLAESLGGVESLISHAATMTHAGMAPQARAAAGISETLLRISVGIEDGDDLVADLDRAFQAAAKR
SIO_010081: DDA3937_RS00950
subclass of: SO_0000673
so part of: DDA3937_RS00950
location: 217701..218861
location: region:217701-218861:1
so has part: feature:217701-218861:1:exon

WP_013315902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217701-218861:1:exon

DDA3937_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00955
old locus tag: Dda3937_03889
so part of: sequence
location: 218864..221299
location: region:218864-221299:1
so has part: feature:218864-221299:1:exon
subclass of: SO_0000010

9731584
type: Gene
SIO_000068: ncbigene

position:218864:1
position: 218864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221299:1
position: 221299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218864-221299:1:exon

DDA3937_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00955
old locus tag: Dda3937_03889
function: 1.5.1.9 metabolism; building block biosynthesis; amino acids; methionine
function: 1.5.1.21 metabolism; building block biosynthesis; amino acids; homoserine
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013649013.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional aspartate kinase/homoserine dehydrogenase II
translation: MSALGIAAAVKGRQLHKFGGSSLADVKCYQRVAGIMADYSQAGDLMVVSAAGSTTNQLISWLNLSQSDRISAHQVQQSLRRYQSELISGLLPAETAAPLINEFIRDLERLAALLDGKLTEAAYAEVVGHGEIWSARLMAAVLNQKNLPAAWLDARTFLRAERAAQPQVDEGRSWPLLQQLLTQNAGQRLVITGFISSNDAGETVLLGRNGSDYSATQIGALAGVERVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSGSDIDLQLRCSYQPEQGSTRIERVLASGTGAKIVTSHDDVCLIEIGVPAEHDFARTHKDVEQLLQKSQIRPLALGVHQDRNLLQLCYTSEVVHSAWQVLEQAALPVSLHLREGLALVALVGAGVCRNPLHSHRFYQQLRDQPIEFVWQAEDDISLVAVLRVGPTEHLVRGLHHSLFRAEKRIGLVLFGKGNIGSRWLELFAREQSLISARTGFEFTLAGVVDSSRSLLDYEGLDASRVLAFFGDEAQERDDDELFLWMRAHPYDDLVVLDVTASQSVADLYLDFASHGFHVISANKLAGASGGDNYRQIRDAFAKTGRHWLYNATVGAGLPVNYAVRDLRESGDSILAISGIFSGTLSWLFLQFDGTVPFTELVDQAWQQGLTEPDPRVDLSGQDVMRKLVILAREAGYEIEPNQVRVESLVPAGCENGSVDQFFEDGEPLNQQMLQRLEAANEMGLVLRYVARFDVNGKARVGVEAVRADHPLAALLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAIQSDLNRLAQLL
SIO_010081: DDA3937_RS00955
subclass of: SO_0000673
so part of: DDA3937_RS00955
location: 218864..221299
location: region:218864-221299:1
so has part: feature:218864-221299:1:exon

WP_013315903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218864-221299:1:exon

DDA3937_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: metF
locus tag: DDA3937_RS00960
old locus tag: Dda3937_03890
so part of: sequence
location: 221642..222538
location: region:221642-222538:1
so has part: feature:221642-222538:1:exon
subclass of: SO_0000010

9731585
type: Gene
SIO_000068: ncbigene

position:221642:1
position: 221642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222538:1
position: 222538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221642-222538:1:exon

DDA3937_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: metF
locus tag: DDA3937_RS00960
old locus tag: Dda3937_03890
EC number: 1.5.1.20
function: 1.7.17 metabolism; central intermediary metabolism; formyl-tetrahydrofolate biosynthesis
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886531.1
GO function: GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO process: GO:0009086 - methionine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methylenetetrahydrofolate reductase
translation: MSFFHANHQEALNQNLAELQGRINVSFEFFPPRTSEMEETLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKERTGLEAAPHLTCIDASRDELKAIAQDYWQSGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVGDFDISVAAYPEVHPEAKSAQADLINLKRKIDAGASRAITQFFFDVESYLRFRDRCVTTGIDVEIVPGILPVSNFKQLQRFATMTNVRVPNWMTAMFEGLDNDPETRKMVGASIAMDMVKILSREGVKDFHFYTLNRSELSYAICHTLGVRPVTAA
SIO_010081: DDA3937_RS00960
subclass of: SO_0000673
so part of: DDA3937_RS00960
location: 221642..222538
location: region:221642-222538:1
so has part: feature:221642-222538:1:exon

WP_013315904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221642-222538:1:exon

DDA3937_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00965
old locus tag: Dda3937_03891
so part of: sequence
location: complement(222718..223449)
location: region:222718-223449:-1
so has part: feature:222718-223449:-1:exon
subclass of: SO_0000010

9731586
type: Gene
SIO_000068: ncbigene

position:222718:-1
position: 222718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223449:-1
position: 223449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222718-223449:-1:exon

DDA3937_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00965
old locus tag: Dda3937_03891
function: 1.6.15.2 metabolism; macromolecules (cellular constituent) biosynthesis; large molecule carriers; thioredoxin, glutaredoxin
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012767909.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione peroxidase
translation: MFVSQEGKKIPSVTFHTRQGDQWVDVTTAELFNNKTVVVFSLPGAFTPTCSSSHLPRYNELAAVFKQFGVDAVLCVSVNDTFVMNAWKADQDAENITFIPDGNGEFTRAMNMLVEKAELGFGPRSWRYSMLVRHGVVAKMFVEPNKPGDPFEVSDADTMLKYLAPHYKVQESVSLFTKPGCPFCAKAKQLLQDRGIQYEEIMLGKDATTVSLRAMTGRSTVPQVFMGGRHIGGSEELETVLTT
SIO_010081: DDA3937_RS00965
subclass of: SO_0000673
so part of: DDA3937_RS00965
location: complement(222718..223449)
location: region:222718-223449:-1
so has part: feature:222718-223449:-1:exon

WP_013315905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222718-223449:-1:exon

DDA3937_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: oxyR
locus tag: DDA3937_RS00970
old locus tag: Dda3937_03892
so part of: sequence
location: 223626..224543
location: region:223626-224543:1
so has part: feature:223626-224543:1:exon
subclass of: SO_0000010

9731587
type: Gene
SIO_000068: ncbigene

position:223626:1
position: 223626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224543:1
position: 224543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223626-224543:1:exon

DDA3937_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: oxyR
locus tag: DDA3937_RS00970
old locus tag: Dda3937_03892
function: OxyR activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS (a regulatory RNA), dps, fur and grxA.
function: OxyR activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, dps, fur and grxA.
function: An EC16 oxyR mutant is reduced in catalase and glutathione reductase activity and is unable to form colonies on agar plates unless exogenous catalase is added. However, it is not reduced in virulence, suggesting that hydrogen peroxide is not important for
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.2 regulation; type of regulation; transcriptional level; activator
function: 3.3.2 regulation; genetic unit regulated; regulon
function: 5.5.6 cell processes; adaptation to stress; other (mechanical, nutritional, oxidative stress)
function: 7.1 location of gene products; cytoplasm
function: 3.1.2.3 regulation; type of regulation; transcriptional level; repressor
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019846448.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding transcriptional regulator OxyR
translation: MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAGLLLVEQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPQIIPMLHRTFPKLEMYLHEAQTHQLLAQLDSGKLDCAILAMVKESEAFIEVPLFDEPMKLAIYQDHPWANRERVAMSDLSGEKLLMLEDGHCLRDQAMGFCFQAGADEDTHFRATSLETLRNMVAAGSGITLLPSLAVPPERVRDGVCYLPCYKPEPKRTIALVYRPGSPLRGRYEQLADSVREHMQLHMEQLSKQSA
SIO_010081: DDA3937_RS00970
subclass of: SO_0000673
so part of: DDA3937_RS00970
location: 223626..224543
location: region:223626-224543:1
so has part: feature:223626-224543:1:exon

WP_013315906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223626-224543:1:exon

DDA3937_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: sthA
locus tag: DDA3937_RS00975
old locus tag: Dda3937_03893
so part of: sequence
location: complement(224627..226027)
location: region:224627-226027:-1
so has part: feature:224627-226027:-1:exon
subclass of: SO_0000010

9731588
type: Gene
SIO_000068: ncbigene

position:224627:-1
position: 224627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226027:-1
position: 226027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224627-226027:-1:exon

DDA3937_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: sthA
locus tag: DDA3937_RS00975
old locus tag: Dda3937_03893
EC number: 1.6.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:NP_463005.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0003957 - NAD(P)+ transhydrogenase (B-specific) activity [Evidence IEA]
GO process: GO:0045454 - cell redox homeostasis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Si-specific NAD(P)(+) transhydrogenase
translation: MQQQYDYDAIVIGSGPGGEGAAMGLAKQGAKIAVIERHYNVGGGCTHWGTIPSKALRHAVSRIIEFNQNPLYSDNARVISSSFSDILRHADSVIGQQTRMRQGFYERNHCELFSGEARFIDAHTIAVYYPDDTHDTLTAANIIIATGSRPYHPAGVDFHHPRIYDSDSILDLDYEPKHVIIYGAGVIGCEYASIFRGLNVKVDLINTRDRLLAFLDQEMSDALSYHFWNSGVVIRHNEEFERIEGLDDGVIIHLKSGKKMKADCLLYANGRTGNTETLGLENVGLETDSRGQLKVNSMYQTAQAHIYAVGDVIGYPSLASAAYDQGRIAAQAITKGDATAHLIEDIPTGIYTIPEISSVGKTEQELTAMKVPYEVGRAQFKHLARAQIVGMNVGSLKILFHRETKQILGIHCFGERAAEIIHIGQAIMEQKGEGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF
SIO_010081: DDA3937_RS00975
subclass of: SO_0000673
so part of: DDA3937_RS00975
location: complement(224627..226027)
location: region:224627-226027:-1
so has part: feature:224627-226027:-1:exon

WP_139348364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224627-226027:-1:exon

DDA3937_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: fabR
locus tag: DDA3937_RS00980
old locus tag: Dda3937_03894
so part of: sequence
location: 226234..226872
location: region:226234-226872:1
so has part: feature:226234-226872:1:exon
subclass of: SO_0000010

9731589
type: Gene
SIO_000068: ncbigene

position:226234:1
position: 226234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226872:1
position: 226872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226234-226872:1:exon

DDA3937_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: fabR
locus tag: DDA3937_RS00980
old locus tag: Dda3937_03894
function: FabR regulates fabA and fabB genes involved in unsaturated fatty acid biosynthesis
function: 3.1.2.3 regulation; type of regulation; transcriptional level; repressor
function: 1.5.4 metabolism; building block biosynthesis; fatty acid and phosphatidic acid
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942852.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH-type transcriptional repressor FabR
translation: MGVRAQQKERTRRSLVEAAFSQLSAERSFASLSLREVAREAGIAPTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIVKSGGSVIRTSVSTFMEFIGNNPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLEVENHIPRSFAEAQAEAMVIIVFSAGAEALDVDIEQRRQLEERLVLQLRMIAKGAYYWYRKEQGKGFVYPEG
SIO_010081: DDA3937_RS00980
subclass of: SO_0000673
so part of: DDA3937_RS00980
location: 226234..226872
location: region:226234-226872:1
so has part: feature:226234-226872:1:exon

WP_013315908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226234-226872:1:exon

DDA3937_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS00985
old locus tag: Dda3937_03895
so part of: sequence
location: 226887..227261
location: region:226887-227261:1
so has part: feature:226887-227261:1:exon
subclass of: SO_0000010

9731591
type: Gene
SIO_000068: ncbigene

position:226887:1
position: 226887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227261:1
position: 227261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226887-227261:1:exon

DDA3937_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS00985
old locus tag: Dda3937_03895
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942853.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YijD family membrane protein
translation: MTEQINSEKSTLVLTLVAGLSANGSFVAVFSSIVPFSIFPLIALVLSVYCLHQRYMHHAMPKGTPLLAAGCFLFGLLLYSAIVRAEYPQIGSNFVPSILCVVLALWLVVKLRTRKPGSGEINTP
SIO_010081: DDA3937_RS00985
subclass of: SO_0000673
so part of: DDA3937_RS00985
location: 226887..227261
location: region:226887-227261:1
so has part: feature:226887-227261:1:exon

WP_013315910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226887-227261:1:exon

DDA3937_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: trmA
locus tag: DDA3937_RS00990
old locus tag: Dda3937_03896
so part of: sequence
location: complement(227274..228377)
location: region:227274-228377:-1
so has part: feature:227274-228377:-1:exon
subclass of: SO_0000010

9731592
type: Gene
SIO_000068: ncbigene

position:227274:-1
position: 227274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228377:-1
position: 228377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227274-228377:-1:exon

DDA3937_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: trmA
locus tag: DDA3937_RS00990
old locus tag: Dda3937_03896
EC number: 2.1.1.35
function: 2.2.3 information transfer; RNA related; RNA modification
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942854.1
GO function: GO:0030697 - S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (uridine(54)-C5)-methyltransferase TrmA
translation: MTPEILPIDQYDAQLEEKTGRLGAMMAPFDAPAPTVFRSPVSHYRMRAEFRIWHDGDDLYHIIFDQQTKQRIRVDRFPAASELINRLMPALISALRAEPVLRRKLFQIDYLSTLSGEIVVSLLYHKALDDEWQQCARLLRDQLHAQGFALQLIGRATKTKICLDRDYVDECLPVAGRQMIYRQVENSFTQPNAMMNIQMLEWALSATQGSTGDLLELYCGNGNFSLALARNFERVLATEIAKPSVAAAQYNIAANQIDNVQIIRMAAEEFTQAMNGVRQFNRLQGIDLAGYRCETIFVDPPRSGLDDDTVKLVQAYPRILYISCNPETLCANLETLSQTHRISQLALFDQFPYTHHMECGVLLEKRQ
SIO_010081: DDA3937_RS00990
subclass of: SO_0000673
so part of: DDA3937_RS00990
location: complement(227274..228377)
location: region:227274-228377:-1
so has part: feature:227274-228377:-1:exon

WP_013315911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227274-228377:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 198628
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00174
inference: COORDINATES: profile:INFERNAL:1.1.1
note: cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: adenosylcobalamin
so part of: sequence
location: 228516..228718
location: region:228516-228718:1
so has part: feature:228516-228718:1:region

position:228516:1
position: 228516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228718:1
position: 228718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228516-228718:1:region

DDA3937_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: btuB
locus tag: DDA3937_RS00995
old locus tag: Dda3937_03897
so part of: sequence
location: 228786..230657
location: region:228786-230657:1
so has part: feature:228786-230657:1:exon
subclass of: SO_0000010

9731593
type: Gene
SIO_000068: ncbigene

position:228786:1
position: 228786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230657:1
position: 230657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228786-230657:1:exon

DDA3937_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: btuB
locus tag: DDA3937_RS00995
old locus tag: Dda3937_03897
function: 6.1 cell structure; membrane
function: 4.1.B transport; Channel-type Transporters; Beta barrel porins (The Outer Membrane Porin (OMP) Functional Superfamily)
function: 7.4 location of gene products; outer membrane
function: 8.1 extrachromosomal; prophage genes and phage related functions
function: 4.S.187 transport; substrate; vitamin B12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002228170.1
GO function: GO:0015420 - ABC-type vitamin B12 transporter activity [Evidence IEA]
GO process: GO:0015889 - cobalamin transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent vitamin B12 receptor BtuB
translation: MFTKKTTMLAAMVATAFSGWAQGSDNTQQNSNDAMVVTANRFPQPISSVLAPTTVVTRDDIDRWQSKSLTDVMRRLPGVDIGQNGGRGQLASVFIRGTESRHILVLIDGIRMASPGVTGTTDFSQIPMSIIQRIEYIRGARSAVYGSEAIGGVINIITTRTQDGGVLNAGYGSHAYQQYDGSIKQHIGENTAVSLAGGYEGTHGFNVYPGSTIAGDDQKSGYRSKTFWGMVEHQFTPQLNGFVRNYGYDNLTDYNKIYSDSSSNRRYLSSRSYDTGLQFQQGIYAGQLVASYQTYDDQNYDDAVGRYSNSVTRINQRSLQWGNVFSVGQGSISTGVDWRDERAAAGGASAISESQSRTNTGLYLTTQQRIGQFTLEGAIRGDDNQQYGRHGTWQTAAGWEFIDGYRLTGSYGTAFKAPTFSQIYNTDYNVGNISLKPEESKQWEFGVEGISGPVNWRASTYRNDINNLIEYDGTSNPASPTYFNVAKAVIKGVEFTASYDTGPVTHHATLEYLDARNAETQAVLERRAHKKAKYSIDTTVADVDWSLAWIYQGARADKKYNEFPSDPVKLGGYSTWDLSAAYPVTSHLTVRARIANLFDKNYETVYGYRTAGREYYLTGSYSF
SIO_010081: DDA3937_RS00995
subclass of: SO_0000673
so part of: DDA3937_RS00995
location: 228786..230657
location: region:228786-230657:1
so has part: feature:228786-230657:1:exon

WP_013315912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228786-230657:1:exon

DDA3937_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: murI
locus tag: DDA3937_RS01000
old locus tag: Dda3937_03898
so part of: sequence
location: 230602..231474
location: region:230602-231474:1
so has part: feature:230602-231474:1:exon
subclass of: SO_0000010

9731594
type: Gene
SIO_000068: ncbigene

position:230602:1
position: 230602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231474:1
position: 231474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230602-231474:1:exon

DDA3937_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: murI
locus tag: DDA3937_RS01000
old locus tag: Dda3937_03898
EC number: 5.1.1.3
function: 1.5.1.1 metabolism; building block biosynthesis; amino acids; glutamate
function: 1.6.7 metabolism; macromolecules (cellular constituent) biosynthesis; peptidoglycan (murein)
function: 6.2 cell structure; peptidoglycan (murein)
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855427.1
GO function: GO:0008881 - glutamate racemase activity [Evidence IEA]
GO process: GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate racemase
translation: MATELQGENTISPEAIVSDLPARPTVLVFDSGVGGLSVYDEVRKLLPDLHYIYTFDNEAFPYGEKPEQFIIERVVSIVDAVEKQHPLSLVIIACNTASTISLPALRARFNFPVVGVVPAVKPAAKLTRNGVVGLLATRATVQRPYTHELISRFANDCQILLLGSAELVEWGEAKLQGETVPEEVLRKILKPWLKLPEPPDTVVLGCTHFPLLSEELQQVLPDGTRLVDSGTAIARRTAWLIEHLDNPKLSTERNLAYCLSITPKVAALSPVLRRYGFSALERLTLLPADE
SIO_010081: DDA3937_RS01000
subclass of: SO_0000673
so part of: DDA3937_RS01000
location: 230602..231474
location: region:230602-231474:1
so has part: feature:230602-231474:1:exon

WP_013315913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230602-231474:1:exon

DDA3937_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01005
old locus tag: Dda3937_04663
so part of: sequence
location: 231820..233361
location: region:231820-233361:1
so has part: feature:231820-233361:1:exon
subclass of: SO_0000573

9731595
type: Gene
SIO_000068: ncbigene

position:231820:1
position: 231820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233361:1
position: 233361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231820-233361:1:exon

DDA3937_RS01005
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 198628
locus tag: DDA3937_RS01005
old locus tag: Dda3937_04663
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DDA3937_RS01005
subclass of: SO_0000673
so part of: DDA3937_RS01005
location: 231820..233361
location: region:231820-233361:1
so has part: feature:231820-233361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231820-233361:1:exon

DDA3937_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01010
old locus tag: Dda3937_04672
so part of: sequence
location: 233448..233523
location: region:233448-233523:1
so has part: feature:233448-233523:1:exon
subclass of: SO_0000663

9731596
type: Gene
SIO_000068: ncbigene

position:233448:1
position: 233448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233523:1
position: 233523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233448-233523:1:exon

DDA3937_RS01010
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 198628
locus tag: DDA3937_RS01010
old locus tag: Dda3937_04672
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:233482..233484,aa:Glu,seq:ttc)
SIO_010081: DDA3937_RS01010
subclass of: SO_0000673
so part of: DDA3937_RS01010
location: 233448..233523
location: region:233448-233523:1
so has part: feature:233448-233523:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:233448-233523:1:exon

DDA3937_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01015
old locus tag: Dda3937_04664
so part of: sequence
location: 233718..236625
location: region:233718-236625:1
so has part: feature:233718-236625:1:exon
subclass of: SO_0000573

9731597
type: Gene
SIO_000068: ncbigene

position:233718:1
position: 233718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236625:1
position: 236625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233718-236625:1:exon

DDA3937_RS01015
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 198628
locus tag: DDA3937_RS01015
old locus tag: Dda3937_04664
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DDA3937_RS01015
subclass of: SO_0000673
so part of: DDA3937_RS01015
location: 233718..236625
location: region:233718-236625:1
so has part: feature:233718-236625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:233718-236625:1:exon

DDA3937_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rrf
locus tag: DDA3937_RS01020
old locus tag: Dda3937_04226
so part of: sequence
location: 236734..236849
location: region:236734-236849:1
so has part: feature:236734-236849:1:exon
subclass of: SO_0000573

9731598
type: Gene
SIO_000068: ncbigene

position:236734:1
position: 236734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236849:1
position: 236849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236734-236849:1:exon

DDA3937_RS01020
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 198628
gene: rrf
locus tag: DDA3937_RS01020
old locus tag: Dda3937_04226
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DDA3937_RS01020
subclass of: SO_0000673
so part of: DDA3937_RS01020
location: 236734..236849
location: region:236734-236849:1
so has part: feature:236734-236849:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236734-236849:1:exon

DDA3937_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: murB
locus tag: DDA3937_RS01025
old locus tag: Dda3937_04216
so part of: sequence
location: 237119..238156
location: region:237119-238156:1
so has part: feature:237119-238156:1:exon
subclass of: SO_0000010

9731599
type: Gene
SIO_000068: ncbigene

position:237119:1
position: 237119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238156:1
position: 238156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237119-238156:1:exon

DDA3937_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: murB
locus tag: DDA3937_RS01025
old locus tag: Dda3937_04216
EC number: 1.3.1.98
function: 1.6.7 metabolism; macromolecules (cellular constituent) biosynthesis; peptidoglycan (murein)
function: 6.2 cell structure; peptidoglycan (murein)
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010287071.1
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate dehydrogenase
translation: MTNSVTSLKSFNSFSLPVFATEVATIADSSALLSAWQRAHQGKLPVLILGGGSNVLFLDDFHGIILINRLKGIEIKENASEWMLHVGAGENWHYLVEYTLERQIAGLENLALIPGCVGSAPIQNIGAYGVELKKVCAYVDMLNLRTGETVRLSAEECQFGYRDSVFKHEYQDGFAIIAVGLHLSKEWKPVLEYGDLTRLDHTVVTAKQIFDAVCQMRRSKLPDPEVMGNAGSFFKNPVIPAAMAEHILASYPNVPHYPQPNGEVKLAAGWLIDQCGLKGYQIGQAAVHDKQALVLVNKGEATSRDVVNLARYVRNQVAEKFEVWLEPEVRFISAQGEVNALEVLA
SIO_010081: DDA3937_RS01025
subclass of: SO_0000673
so part of: DDA3937_RS01025
location: 237119..238156
location: region:237119-238156:1
so has part: feature:237119-238156:1:exon

WP_013315914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237119-238156:1:exon

DDA3937_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: birA
locus tag: DDA3937_RS01030
old locus tag: Dda3937_04217
so part of: sequence
location: 238153..239112
location: region:238153-239112:1
so has part: feature:238153-239112:1:exon
subclass of: SO_0000010

9731600
type: Gene
SIO_000068: ncbigene

position:238153:1
position: 238153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239112:1
position: 239112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238153-239112:1:exon

DDA3937_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: birA
locus tag: DDA3937_RS01030
old locus tag: Dda3937_04217
EC number: 6.3.4.15
function: BirA controls the expression of genes involved in biotin biosynthesis
function: 1.5.3.1 metabolism; building block biosynthesis; cofactor, small molecule carrier; biotin
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.3 regulation; type of regulation; transcriptional level; repressor
function: 3.3.1 regulation; genetic unit regulated; operon
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019846591.1
GO function: GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA
translation: MKDYTVPLKLISILSDGEFYSGEYLGELMGMSRAAINKHIQTIREWGLDVFTVTGKGYALSAPIQLLDADKIRSHIQSGNIAVLPVIDSTNQYLLDRLDSVSSGDACIAEYQNAGRGRRGRTWFSPFGSNLYLSLYWRLEQGPAAAVGVSLVIGIVMAEVLHHLGADGVRVKWPNDLYLNDKKLAGILVELNGRTGDAAHLVIGAGINLRMNSSGSDVINQGWINLQEAGIDIDRNMLAVKLITELRTALVIYEQQGLAPFISRWNDLDNFYNRAVKLIVGNREITGIDKGIDSQGALLLEQDGGIQSYIGGEISLRGW
SIO_010081: DDA3937_RS01030
subclass of: SO_0000673
so part of: DDA3937_RS01030
location: 238153..239112
location: region:238153-239112:1
so has part: feature:238153-239112:1:exon

WP_013315915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238153-239112:1:exon

DDA3937_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: coaA
locus tag: DDA3937_RS01035
old locus tag: Dda3937_04218
so part of: sequence
location: complement(239136..240086)
location: region:239136-240086:-1
so has part: feature:239136-240086:-1:exon
subclass of: SO_0000010

9731601
type: Gene
SIO_000068: ncbigene

position:239136:-1
position: 239136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240086:-1
position: 240086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239136-240086:-1:exon

DDA3937_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: coaA
locus tag: DDA3937_RS01035
old locus tag: Dda3937_04218
EC number: 2.7.1.33
function: 1.5.3.5 metabolism; building block biosynthesis; cofactor, small molecule carrier; Coenzyme A
inference: COORDINATES: similar to AA sequence:RefSeq:NP_463013.1
GO function: GO:0004594 - pantothenate kinase activity [Evidence IEA]
GO process: GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I pantothenate kinase
translation: MTNKAQSFATPYLQFDRQQWAHLRDSVPLTLTEDEIIKLKGINEDLSLDEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTDGQKIPYIIGIAGSVAVGKSTTARVLQALLSRWPEHRKVELITTDGFLHPNKVLQQRNLMKKKGFPQSYDMHSLVKFVSEIKSGVPWVTAPTYSHLTYDIVPDCNKVIEQPDILILEGLNVLQSGMDYPHDPHRVFVSDFVDFSIYVDAPEELLKSWYINRFLKFRQGAFTNPDSYFHNYAKLAEVEAVNIASQLWNEINGLNLKQNILPTRGRASLIMTKSANHAVECVRLRK
SIO_010081: DDA3937_RS01035
subclass of: SO_0000673
so part of: DDA3937_RS01035
location: complement(239136..240086)
location: region:239136-240086:-1
so has part: feature:239136-240086:-1:exon

WP_013315916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239136-240086:-1:exon

DDA3937_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01040
so part of: sequence
location: complement(240302..240850)
location: region:240302-240850:-1
so has part: feature:240302-240850:-1:exon
subclass of: SO_0000010

23677381
type: Gene
SIO_000068: ncbigene

position:240302:-1
position: 240302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240850:-1
position: 240850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240302-240850:-1:exon

DDA3937_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012772930.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MKIVLLNVATLPVYRYELASLLVNAVAKGASVGYHSPLTHEEAESYFHSLRPSVAEGERLLWIARDDNGVIGSIQLELCQKSNGQNRAEVQKLLVHSSMRRQGIGKRLLSTLEQAALQHRRGLIYLDTQAGSPAEHFYRAQGYRYLGELPDYASSPDGYYYPTAIYYKRLFAVNRVERALAS
SIO_010081: DDA3937_RS01040
subclass of: SO_0000673
so part of: DDA3937_RS01040
location: complement(240302..240850)
location: region:240302-240850:-1
so has part: feature:240302-240850:-1:exon

WP_033111521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240302-240850:-1:exon

DDA3937_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01045
old locus tag: Dda3937_04227
so part of: sequence
location: 241227..241302
location: region:241227-241302:1
so has part: feature:241227-241302:1:exon
subclass of: SO_0000663

9731604
type: Gene
SIO_000068: ncbigene

position:241227:1
position: 241227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241302:1
position: 241302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241227-241302:1:exon

DDA3937_RS01045
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 198628
locus tag: DDA3937_RS01045
old locus tag: Dda3937_04227
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:241260..241262,aa:Thr,seq:tgt)
SIO_010081: DDA3937_RS01045
subclass of: SO_0000673
so part of: DDA3937_RS01045
location: 241227..241302
location: region:241227-241302:1
so has part: feature:241227-241302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:241227-241302:1:exon

DDA3937_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01050
old locus tag: Dda3937_04228
so part of: sequence
location: 241320..241404
location: region:241320-241404:1
so has part: feature:241320-241404:1:exon
subclass of: SO_0000663

9731605
type: Gene
SIO_000068: ncbigene

position:241320:1
position: 241320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241404:1
position: 241404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241320-241404:1:exon

DDA3937_RS01050
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 198628
locus tag: DDA3937_RS01050
old locus tag: Dda3937_04228
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:241354..241356,aa:Tyr,seq:gta)
SIO_010081: DDA3937_RS01050
subclass of: SO_0000673
so part of: DDA3937_RS01050
location: 241320..241404
location: region:241320-241404:1
so has part: feature:241320-241404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:241320-241404:1:exon

DDA3937_RS21750
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS21750
so part of: sequence
location: 241447..241571
location: region:241447-241571:1
so has part: feature:241447-241571:1:exon
subclass of: SO_0000011

30316556
type: Gene
SIO_000068: ncbigene

position:241447:1
position: 241447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241571:1
position: 241571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241447-241571:1:exon

DDA3937_RS21750
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 198628
nc RNA class: other
locus tag: DDA3937_RS21750
product: RtT sRNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00391
inference: COORDINATES: profile:INFERNAL:1.1.1
note: rtT sRNA, processed from tyrT transcript; Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DDA3937_RS21750
subclass of: SO_0000673
so part of: DDA3937_RS21750
location: 241447..241571
location: region:241447-241571:1
so has part: feature:241447-241571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:241447-241571:1:exon

DDA3937_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01055
old locus tag: Dda3937_04229
so part of: sequence
location: 241708..241782
location: region:241708-241782:1
so has part: feature:241708-241782:1:exon
subclass of: SO_0000663

9731606
type: Gene
SIO_000068: ncbigene

position:241708:1
position: 241708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241782:1
position: 241782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241708-241782:1:exon

DDA3937_RS01055
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 198628
locus tag: DDA3937_RS01055
old locus tag: Dda3937_04229
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:241741..241743,aa:Gly,seq:tcc)
SIO_010081: DDA3937_RS01055
subclass of: SO_0000673
so part of: DDA3937_RS01055
location: 241708..241782
location: region:241708-241782:1
so has part: feature:241708-241782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:241708-241782:1:exon

DDA3937_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01060
old locus tag: Dda3937_04230
so part of: sequence
location: 241792..241867
location: region:241792-241867:1
so has part: feature:241792-241867:1:exon
subclass of: SO_0000663

9731607
type: Gene
SIO_000068: ncbigene

position:241792:1
position: 241792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241867:1
position: 241867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241792-241867:1:exon

DDA3937_RS01060
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 198628
locus tag: DDA3937_RS01060
old locus tag: Dda3937_04230
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:241825..241827,aa:Thr,seq:ggt)
SIO_010081: DDA3937_RS01060
subclass of: SO_0000673
so part of: DDA3937_RS01060
location: 241792..241867
location: region:241792-241867:1
so has part: feature:241792-241867:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:241792-241867:1:exon

DDA3937_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: tuf
locus tag: DDA3937_RS01065
old locus tag: Dda3937_00214
so part of: sequence
location: 241974..243158
location: region:241974-243158:1
so has part: feature:241974-243158:1:exon
subclass of: SO_0000010

9731608
type: Gene
SIO_000068: ncbigene

position:241974:1
position: 241974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243158:1
position: 243158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241974-243158:1:exon

DDA3937_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: tuf
locus tag: DDA3937_RS01065
old locus tag: Dda3937_00214
function: 2.3.2 information transfer; protein related; translation
function: 5.5.1 cell processes; adaptation to stress; osmotic pressure
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312930.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor Tu
translation: MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGQARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPVIRGSALKALEGEAEWEAKIIELAEALDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEVERGQVLAKPGSIKPHTQFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVNLIAPIAMDDGLRFAIREGGRTVGAGVVAKVIA
SIO_010081: DDA3937_RS01065
subclass of: SO_0000673
so part of: DDA3937_RS01065
location: 241974..243158
location: region:241974-243158:1
so has part: feature:241974-243158:1:exon

WP_013315919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241974-243158:1:exon

DDA3937_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: secE
locus tag: DDA3937_RS01070
old locus tag: Dda3937_00215
so part of: sequence
location: 243393..243776
location: region:243393-243776:1
so has part: feature:243393-243776:1:exon
subclass of: SO_0000010

9731609
type: Gene
SIO_000068: ncbigene

position:243393:1
position: 243393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243776:1
position: 243776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243393-243776:1:exon

DDA3937_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: secE
locus tag: DDA3937_RS01070
old locus tag: Dda3937_00215
function: 2.3.5 information transfer; protein related; export, signal peptide cleavage
function: 7.3 location of gene products; inner membrane
function: 4.3.A.5 transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The Type II (General) Secretory Pathway (IISP) Family
function: 6.1 cell structure; membrane
function: 4.S.160 transport; substrate; protein
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecE
translation: MSANTEAQESGRGLEALKWLVVAVLLIAAIVGNYYYREFSLPLRALAVVVLIAAAGGVALLTTKGKATVLFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVSFITGLRF
SIO_010081: DDA3937_RS01070
subclass of: SO_0000673
so part of: DDA3937_RS01070
location: 243393..243776
location: region:243393-243776:1
so has part: feature:243393-243776:1:exon

WP_013315920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243393-243776:1:exon

DDA3937_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: nusG
locus tag: DDA3937_RS01075
old locus tag: Dda3937_00216
so part of: sequence
location: 243778..244323
location: region:243778-244323:1
so has part: feature:243778-244323:1:exon
subclass of: SO_0000010

9731610
type: Gene
SIO_000068: ncbigene

position:243778:1
position: 243778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244323:1
position: 244323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243778-244323:1:exon

DDA3937_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: nusG
locus tag: DDA3937_RS01075
old locus tag: Dda3937_00216
function: 2.2.2 information transfer; RNA related; transcription related
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004953928.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination/antitermination protein NusG
translation: MSEAPKKRWYVVQAFSGFEGRVAQSLREHIKLHSMEDHFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMDDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFGQVEKG
SIO_010081: DDA3937_RS01075
subclass of: SO_0000673
so part of: DDA3937_RS01075
location: 243778..244323
location: region:243778-244323:1
so has part: feature:243778-244323:1:exon

WP_013315921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243778-244323:1:exon

DDA3937_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rplK
locus tag: DDA3937_RS01080
old locus tag: Dda3937_00217
so part of: sequence
location: 244472..244900
location: region:244472-244900:1
so has part: feature:244472-244900:1:exon
subclass of: SO_0000010

9731611
type: Gene
SIO_000068: ncbigene

position:244472:1
position: 244472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244900:1
position: 244900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244472-244900:1:exon

DDA3937_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rplK
locus tag: DDA3937_RS01080
old locus tag: Dda3937_00217
function: 2.3.8 information transfer; protein related; ribosomal proteins
function: 2.3.2 information transfer; protein related; translation
function: 6.6 cell structure; ribosome
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L11
translation: MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTESLEKGLPIPVVITVYSDRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKVTHAQVLEIAQTKAADMTGADVEAMARSIAGTARSMGLVVED
SIO_010081: DDA3937_RS01080
subclass of: SO_0000673
so part of: DDA3937_RS01080
location: 244472..244900
location: region:244472-244900:1
so has part: feature:244472-244900:1:exon

WP_013315922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244472-244900:1:exon

DDA3937_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rplA
locus tag: DDA3937_RS01085
old locus tag: Dda3937_00218
so part of: sequence
location: 244904..245608
location: region:244904-245608:1
so has part: feature:244904-245608:1:exon
subclass of: SO_0000010

9731612
type: Gene
SIO_000068: ncbigene

position:244904:1
position: 244904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245608:1
position: 245608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244904-245608:1:exon

DDA3937_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rplA
locus tag: DDA3937_RS01085
old locus tag: Dda3937_00218
function: 2.3.8 information transfer; protein related; ribosomal proteins
function: 2.3.2 information transfer; protein related; translation
function: 3.1.3.1 regulation; type of regulation; posttranscriptional; translation attenuation and efficiency
function: 6.6 cell structure; ribosome
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312934.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L1
translation: MAKLTKRMRVIREKVDVTKQYDVNEAVALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQIRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPAQAKGVYIKKISLSTTMGAGVAIDQSGLNAVAN
SIO_010081: DDA3937_RS01085
subclass of: SO_0000673
so part of: DDA3937_RS01085
location: 244904..245608
location: region:244904-245608:1
so has part: feature:244904-245608:1:exon

WP_013315923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244904-245608:1:exon

DDA3937_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rplJ
locus tag: DDA3937_RS01090
old locus tag: Dda3937_00219
so part of: sequence
location: 245953..246450
location: region:245953-246450:1
so has part: feature:245953-246450:1:exon
subclass of: SO_0000010

9731613
type: Gene
SIO_000068: ncbigene

position:245953:1
position: 245953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246450:1
position: 246450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245953-246450:1:exon

DDA3937_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rplJ
locus tag: DDA3937_RS01090
old locus tag: Dda3937_00219
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1
GO component: GO:0015934 - large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L10
translation: MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLLRRVVEGTQFECLKDTFVGPTLIAYSMEHPGAAARLFKEFAKANAKFEVKAAAFEGELIPAAQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRDQKEAA
SIO_010081: DDA3937_RS01090
subclass of: SO_0000673
so part of: DDA3937_RS01090
location: 245953..246450
location: region:245953-246450:1
so has part: feature:245953-246450:1:exon

WP_012882962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245953-246450:1:exon

DDA3937_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rplL
locus tag: DDA3937_RS01095
old locus tag: Dda3937_04437
so part of: sequence
location: 246517..246885
location: region:246517-246885:1
so has part: feature:246517-246885:1:exon
subclass of: SO_0000010

9731614
type: Gene
SIO_000068: ncbigene

position:246517:1
position: 246517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246885:1
position: 246885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246517-246885:1:exon

DDA3937_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rplL
locus tag: DDA3937_RS01095
old locus tag: Dda3937_04437
function: 2.3.8 information transfer; protein related; ribosomal proteins
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L7/L12
translation: MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVASAGPAEAAEEKTEFDVILKAVGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEAVSKDDAEALKKSLEEAGAEVEVK
SIO_010081: DDA3937_RS01095
subclass of: SO_0000673
so part of: DDA3937_RS01095
location: 246517..246885
location: region:246517-246885:1
so has part: feature:246517-246885:1:exon

WP_013315924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246517-246885:1:exon

DDA3937_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rpoB
locus tag: DDA3937_RS01100
old locus tag: Dda3937_00220
so part of: sequence
location: 247206..251234
location: region:247206-251234:1
so has part: feature:247206-251234:1:exon
subclass of: SO_0000010

9731615
type: Gene
SIO_000068: ncbigene

position:247206:1
position: 247206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251234:1
position: 251234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247206-251234:1:exon

DDA3937_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rpoB
locus tag: DDA3937_RS01100
old locus tag: Dda3937_00220
EC number: 2.7.7.6
function: 2.2.2 information transfer; RNA related; transcription related
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta
translation: MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPISSYSGNSELQYVSYRLGEPVFDVQECQIRGVTFSAPLRVKLRLVIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALSYSTEEILDLFFDKVVYEIHNNKLQMELVPERLRGETASFDIEADGKVYVEKGRRITARHIRQLEKDGIERIEVPVEYIAGKVLAKDYVDESTGEVIAMANMELSLDLLAKLSQAGHKRLDTLFTNDLDHGPYMSETLRVDPTNDRLSALVEIYRMMRPGEPPTREAAETLFENLFFSEDRYDLSAVGRMKFNRSLLREEIEGSGILSKADIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVRDGVVTDEIHYLSAIEEGNYVIAQANTNLDDEGHFIEELVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLTEELQILEAGLFARIHYVLVAGGVEADKLDKLPRERWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQRAYDLGNDVRQKVDLNTFSDEEVLRLAENLKKGMPIATPVFDGAKENEIKELLKLGDLPTSGQIRLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMPESFNVLLKEIRSLGINIELEEE
SIO_010081: DDA3937_RS01100
subclass of: SO_0000673
so part of: DDA3937_RS01100
location: 247206..251234
location: region:247206-251234:1
so has part: feature:247206-251234:1:exon

WP_013315925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247206-251234:1:exon

DDA3937_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rpoC
locus tag: DDA3937_RS01105
old locus tag: Dda3937_00221
so part of: sequence
location: 251342..255565
location: region:251342-255565:1
so has part: feature:251342-255565:1:exon
subclass of: SO_0000010

9731616
type: Gene
SIO_000068: ncbigene

position:251342:1
position: 251342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255565:1
position: 255565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251342-255565:1:exon

DDA3937_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rpoC
locus tag: DDA3937_RS01105
old locus tag: Dda3937_00221
EC number: 2.7.7.6
function: 2.2.2 information transfer; RNA related; transcription related
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312938.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta'
translation: MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVVEGGMTNLERRQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAGLASLHARVKVRITEHQKNAQGEWTQKISLIDTTVGRAILWMIVPKGLPYSIVNQALGKKAISKMLNTCYRVLGLKPTVIFADQIMYTGFAYAARSGSSVGIDDMVIPAKKVEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTETVINRNGEEEKQVSFNSIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRERVLGRVTAEDVLKPGTADILVPRNTLLNEKWCDLLEENSVDAVKVRSVVGCETDFGVCAKCYGRDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSLKLTNAKFVKNVAGKLVITSRNTELKLIDEFGRTKESYKVPYGAVMGKGDGSEVNGGDTVANWDPHTMPVITEVGGSIRFTDMIDGQTITRQTDELTGLSSIVVLDSAERTGGGKDLRPALKIVDANGDDVLIPGTDMPAQYFLPGKAIVQLEDGSQIGAGDTLARIPQESGGTKDITGGLPRVADLFEARRPKEPAILAEISGVVSFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFEGERVERGDVISDGPESPHDILRLRGVHAVTRYIVNEVQEVYRLQGVKINDKHIEVIVRQMLRKGTIVNPGSSEFLEGEQVEMSRIKIANRQLETDGKITATYSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRQAGEVPAVAQVSADEASANLAELLNAGFGSSDDE
SIO_010081: DDA3937_RS01105
subclass of: SO_0000673
so part of: DDA3937_RS01105
location: 251342..255565
location: region:251342-255565:1
so has part: feature:251342-255565:1:exon

WP_013315926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251342-255565:1:exon

DDA3937_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01110
old locus tag: Dda3937_04438
so part of: sequence
location: 255743..256000
location: region:255743-256000:1
so has part: feature:255743-256000:1:exon
subclass of: SO_0000010

9731617
type: Gene
SIO_000068: ncbigene

position:255743:1
position: 255743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256000:1
position: 256000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255743-256000:1:exon

DDA3937_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01110
old locus tag: Dda3937_04438
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848185.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRSALMAKLTRWAVAGDVKKRFQRFMIRFALMAKLTRWAVAGDVKKRFQRFMIRSALMAELTRWAVAGDVKKRFQRFFSGGEKT
SIO_010081: DDA3937_RS01110
subclass of: SO_0000673
so part of: DDA3937_RS01110
location: 255743..256000
location: region:255743-256000:1
so has part: feature:255743-256000:1:exon

WP_013315927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255743-256000:1:exon

DDA3937_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01115
old locus tag: Dda3937_00222
so part of: sequence
location: 256044..257141
location: region:256044-257141:1
so has part: feature:256044-257141:1:exon
subclass of: SO_0000010

9731618
type: Gene
SIO_000068: ncbigene

position:256044:1
position: 256044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257141:1
position: 257141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256044-257141:1:exon

DDA3937_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01115
old locus tag: Dda3937_00222
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848184.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1176 domain-containing protein
translation: MRFTTTLSGIILVLLSGSAFSAGEMPSGYPTPVQKVFRHWQITCNNLNDCDIRNNDPYLRVTLKREAGAQGKISLDFDLADKRQALYLDGVRFPLSQPAWQTDEEEGAFYVHTDQLDVIQQFVMAAKNAKRLSLSEHGGSQGNNQEESISLNGLNAALLLADERQGRLNNLSALLQVGNGEVAQVPPVPVGQEINPAYTQPPPLTNAKILINGVISAKKNLLEEEDCGLSKEARQLSEAEPLTNELALVMLNCGMGAYQSSSMLFVTPRNNPQAAQLLELPRPIRPADSREEKIRWFTEADYDPESGMLYHSAKGRGIADCGESAQWVFDGKTFQLVAYNYQPECNGGQPGDWPSVWAMPGYPTE
SIO_010081: DDA3937_RS01115
subclass of: SO_0000673
so part of: DDA3937_RS01115
location: 256044..257141
location: region:256044-257141:1
so has part: feature:256044-257141:1:exon

WP_033111522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256044-257141:1:exon

DDA3937_RS23385
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23385
so part of: sequence
location: complement(257409..257591)
location: region:257409-257591:-1
so has part: feature:257409-257591:-1:exon
subclass of: SO_0000010

56705086
type: Gene
SIO_000068: ncbigene

position:257409:-1
position: 257409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257591:-1
position: 257591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257409-257591:-1:exon

DDA3937_RS23385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23385
inference: COORDINATES: protein motif:HMM:NF018294.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1127 domain-containing protein
translation: MTQPLRRSNITVGPRFFLHHVRQRWRAWRQRVQARKALRRLDNDRLEDIGLTRRDVDNLW
SIO_010081: DDA3937_RS23385
subclass of: SO_0000673
so part of: DDA3937_RS23385
location: complement(257409..257591)
location: region:257409-257591:-1
so has part: feature:257409-257591:-1:exon

WP_071819860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257409-257591:-1:exon

DDA3937_RS23770
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23770
old locus tag: Dda3937_04439
so part of: sequence
location: complement(257816..258001)
location: region:257816-258001:-1
so has part: feature:257816-258001:-1:exon
subclass of: SO_0000010

77100065
type: Gene
SIO_000068: ncbigene

position:257816:-1
position: 257816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258001:-1
position: 258001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257816-258001:-1:exon

DDA3937_RS23770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23770
old locus tag: Dda3937_04439
inference: COORDINATES: protein motif:HMM:NF018294.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1127 domain-containing protein
translation: MTTRPPRHTVLPTHASILRHLCRQLLHWHWQRKTRHILTQLDDDRLQDIGLKREDIQRLYR
SIO_010081: DDA3937_RS23770
subclass of: SO_0000673
so part of: DDA3937_RS23770
location: complement(257816..258001)
location: region:257816-258001:-1
so has part: feature:257816-258001:-1:exon

WP_022631757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257816-258001:-1:exon

DDA3937_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01120
old locus tag: Dda3937_00224
so part of: sequence
location: 258160..259596
location: region:258160-259596:1
so has part: feature:258160-259596:1:exon
subclass of: SO_0000010

9731621
type: Gene
SIO_000068: ncbigene

position:258160:1
position: 258160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259596:1
position: 259596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258160-259596:1:exon

DDA3937_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01120
old locus tag: Dda3937_00224
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.3 regulation; type of regulation; transcriptional level; repressor
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009092655.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PLP-dependent aminotransferase family protein
translation: MTRYQHLATLLAQRIEQGLYRGGERLPSVRMLSQEHGVSISTVQQAYYLLEQQQLIVPLPRSGYFVRSRKAEPPIPAMSKPVQRPVEVKKWSAVLELVNARLDPGVISLGSSSPDLTQSTLKPLWKQLQRIGQKQMAASFVYDNLAGVPLLREQIARLMVDSGCQLSADDIVVTTGCTEALAVAVRAVAHPGDIIAVESPVFHGILQILCGLDIKVIEIPTDFTTGINLEALELALDQWPIKAVITVPHCNNPLGFIMPMQRKRALLTLAQRYDIAIIEDDVYGELAYEYPRPVTLKSMDIDGRVLLCSSFSKTLAPGLRVGWVVPGRYLDRALHMKYTSTGSSTVCTQLAVAEFIQQGHYQPHVRRMRGIYQRNLEMFTCWVRRYFPETICVSRPKGGFVLWVEMPESFDGVQLRQQLRENKIHIAEGSLFSASGKYRHGLRMSCAMPMTPEIEQVVATIGAAVERALAAGMHETTA
SIO_010081: DDA3937_RS01120
subclass of: SO_0000673
so part of: DDA3937_RS01120
location: 258160..259596
location: region:258160-259596:1
so has part: feature:258160-259596:1:exon

WP_013315931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258160-259596:1:exon

DDA3937_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01125
old locus tag: Dda3937_00225
so part of: sequence
location: complement(259697..260464)
location: region:259697-260464:-1
so has part: feature:259697-260464:-1:exon
subclass of: SO_0000010

9731622
type: Gene
SIO_000068: ncbigene

position:259697:-1
position: 259697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260464:-1
position: 260464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259697-260464:-1:exon

DDA3937_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01125
old locus tag: Dda3937_00225
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012882970.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-dependent oxidoreductase
translation: MSDKSPRRAPLLLEPDQKKRLVNLERRLMLRSGLTLGAVAMLTGCNMQDGDSVDKVLWAMSRWNDRVQAWLFNGQRLAPSYRRDQITQPFPFNAYYPEYNVPEIYLDSYRLEVAGKVEKKGVWTLEQLRQLPQETQITRLICIEGWSAVGQWRGIPLRHFLQHIGADLTARYVGFKCADRYYSSIDMATALHPQTILALEFGDQALPADYGYPLRLRVPTKLGFKNAKHVAALFVSDTNPGGYWEDQGYNWFSGI
SIO_010081: DDA3937_RS01125
subclass of: SO_0000673
so part of: DDA3937_RS01125
location: complement(259697..260464)
location: region:259697-260464:-1
so has part: feature:259697-260464:-1:exon

WP_013315932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259697-260464:-1:exon

DDA3937_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01130
old locus tag: Dda3937_00226
so part of: sequence
location: complement(260457..261059)
location: region:260457-261059:-1
so has part: feature:260457-261059:-1:exon
subclass of: SO_0000010

9731623
type: Gene
SIO_000068: ncbigene

position:260457:-1
position: 260457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261059:-1
position: 261059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260457-261059:-1:exon

DDA3937_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01130
old locus tag: Dda3937_00226
function: 0.1 unknown function; conserved hypothetical product
function: 1.6.15.1 metabolism; macromolecules (cellular constituent) biosynthesis; large molecule carriers; cytochromes
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943866.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0009055 - electron transfer activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome b/b6 domain-containing protein
translation: MPTSRRPVHPWPVRLTHWLNLLAMIGMFMSGWEIYNASPLFDFHFPHAMTLGGWLGGAISWHLAVMWLLVGNGLLYVLWSLCSGHWRQRWLPLTPASLWRDIRLALTFRLRHESYQYNAIQKLMYFGVITLGVLLVLSGLAIWKPVQLQGLVTVLGGFAIARYVHFFAMAGIGLFVVIHVLMVLIVPRTLWAMLTGGKHE
SIO_010081: DDA3937_RS01130
subclass of: SO_0000673
so part of: DDA3937_RS01130
location: complement(260457..261059)
location: region:260457-261059:-1
so has part: feature:260457-261059:-1:exon

WP_013315933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260457-261059:-1:exon

DDA3937_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01135
old locus tag: Dda3937_00227
so part of: sequence
location: complement(261086..261712)
location: region:261086-261712:-1
so has part: feature:261086-261712:-1:exon
subclass of: SO_0000010

9731624
type: Gene
SIO_000068: ncbigene

position:261086:-1
position: 261086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261712:-1
position: 261712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261086-261712:-1:exon

DDA3937_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01135
old locus tag: Dda3937_00227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016928498.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMIRHRLTGLLFSSLLLCSQWSFAADAPAKPQPPVRGTISAISNTQLQLTDRKGQKIDVKLTDQTRVMSVAQANPDTIKPDSFIGTAAIPQPDGTLKALEVHVFDASLRGAGEGFRPWESADGKSGTMTNGTVGKLVNSNGRTLTVTYNGGQKTVVVPDDVPIVSISPGDRSLLKPGAHIVLFSKLDEQGERVAVAISAGKDGTVPPM
SIO_010081: DDA3937_RS01135
subclass of: SO_0000673
so part of: DDA3937_RS01135
location: complement(261086..261712)
location: region:261086-261712:-1
so has part: feature:261086-261712:-1:exon

WP_202796562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261086-261712:-1:exon

DDA3937_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01140
old locus tag: Dda3937_00228
so part of: sequence
location: 261875..262546
location: region:261875-262546:1
so has part: feature:261875-262546:1:exon
subclass of: SO_0000010

9731625
type: Gene
SIO_000068: ncbigene

position:261875:1
position: 261875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262546:1
position: 262546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261875-262546:1:exon

DDA3937_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01140
old locus tag: Dda3937_00228
function: 3.1.2 regulation; type of regulation; transcriptional level
function: 3.1.2.4.3 regulation; type of regulation; transcriptional level; complex regulation; two component regulatory systems (external signal)
function: 2.2.2 information transfer; RNA related; transcription related
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315935.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal response regulator transcription factor
translation: MRILVIEDDAGTGDYLKKGLTEAGYAVDLARNGTDGLFNALEHGYDAIILDVMLPGLNGWQIIEMLRKKSDVPVLFLTARDQLHDRIHGLELGADDYLIKPFSFTELVLRMRTLLRRGAVREADHYVVADLQLDVLRRKATRQDTAIPLTNKEFMLLHLLVRREGEVLSRTLIASQVWDMNFDSDTNVVDVAVKRLRAKIDKPFDVKLIHTVRGIGYVCEPRS
SIO_010081: DDA3937_RS01140
subclass of: SO_0000673
so part of: DDA3937_RS01140
location: 261875..262546
location: region:261875-262546:1
so has part: feature:261875-262546:1:exon

WP_013315935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261875-262546:1:exon

DDA3937_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01145
old locus tag: Dda3937_00229
so part of: sequence
location: 262543..264006
location: region:262543-264006:1
so has part: feature:262543-264006:1:exon
subclass of: SO_0000010

9731626
type: Gene
SIO_000068: ncbigene

position:262543:1
position: 262543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264006:1
position: 264006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262543-264006:1:exon

DDA3937_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01145
old locus tag: Dda3937_00229
EC number: 2.7.13.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004942261.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal sensor histidine kinase
translation: MKLWLQRWRASSLTLRCSLLFALTTALVVSSVGGYLYGVLSQEMYRRSDVQVTGRVEYYRRLLGRNFTLPMLTANTGMFENMLGSEQDVLLFSLPGQKPLISVNPARIVLPDIAPIAVDMPLQTDAVHGSLTEQGVPLRAIAAQVRLNDGQMLQITAAHVMFSEQKMLEHYLWRVMGAVAIAFVLIGGLGYLALRRGLLPLWRMTAQASAIAPNTLSTRISDADAPQEMRQLIRAFNAMLDRLNEGYLRLTQFSADLAHEIRTPIGALMGHCQVALYQPRSVEEYETLLSDNIAELERMSRMVENILFLARASHEQPVLSRVSVEVATELHRVADYFEMLAEERGIELLCEGHARLAVDALLFQRALSNLVANAVRYAKADSPVRLSVAVFTEQVVVEVVNLGPVLPPSQLEQLFDRFYRADATRSASSDSSGLGLSIVRAIMTLHGGEVIARCDPLDETIGRITFRLIFPASRDDHTLLAKSPLSR
SIO_010081: DDA3937_RS01145
subclass of: SO_0000673
so part of: DDA3937_RS01145
location: 262543..264006
location: region:262543-264006:1
so has part: feature:262543-264006:1:exon

WP_033111523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262543-264006:1:exon

DDA3937_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: thiH
locus tag: DDA3937_RS01150
old locus tag: Dda3937_00230
so part of: sequence
location: complement(264020..265183)
location: region:264020-265183:-1
so has part: feature:264020-265183:-1:exon
subclass of: SO_0000010

9731627
type: Gene
SIO_000068: ncbigene

position:264020:-1
position: 264020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265183:-1
position: 265183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264020-265183:-1:exon

DDA3937_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: thiH
locus tag: DDA3937_RS01150
old locus tag: Dda3937_00230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848177.1
GO function: GO:0016829 - lyase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-iminoacetate synthase ThiH
translation: MDSQTIDGKHQPPSFERHWQQLEWHDLTLRINSKTDADVERALCADRLTREDMMALLSPAAGRWLEPLAQRAQQLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNHLKRKTLDEQEILRECEAIKALGFDHLLLVTGEHQRKVGMDYFRQMLPLIRPQFSSLMMEVQPLSQAEYAELKTLGLDGVMVYQETYHPATYARHHLRGHKQDFAWRLATPDRLGRAGIDKIGLGALIGLSDSWRTDCYMVAEHLLYLQQTYWQSRYSVSFPRLRPCAGGIEPASLMDEAQLMQVICAFRLLAPDVELSLSTRESPFFRDHMIPIAINNVSAFSKTQPGGYADDHPELEQFTPHDNRRPQAVADALTRAGLQPVWKDWDGYLGRPVTG
SIO_010081: DDA3937_RS01150
subclass of: SO_0000673
so part of: DDA3937_RS01150
location: complement(264020..265183)
location: region:264020-265183:-1
so has part: feature:264020-265183:-1:exon

WP_042318713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264020-265183:-1:exon

DDA3937_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01155
old locus tag: Dda3937_00231
so part of: sequence
location: complement(265273..266052)
location: region:265273-266052:-1
so has part: feature:265273-266052:-1:exon
subclass of: SO_0000010

9731628
type: Gene
SIO_000068: ncbigene

position:265273:-1
position: 265273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266052:-1
position: 266052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265273-266052:-1:exon

DDA3937_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01155
old locus tag: Dda3937_00231
EC number: 2.8.1.10
function: 1.5.3.8 metabolism; building block biosynthesis; cofactor, small molecule carrier; thiamin
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848176.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiazole synthase
translation: MLKIADITFTSRLLTGTGKFSSAKLMQDALHASGSQLVTLAMKRVDLKSGSDAILAPLRELGVHLLPNTSGAKTAEEAVFAARLAREALGTHWVKLEIHPDMKYLLPDPVETLKAAEQLVKDGFVVLPYCGADPVLCKRLEDAGCAAVMPLGAPIGSNQGLQTRDFLRIIIEQARVPVVVDAGIGAPSHAAEAIELGADAVLVNTAIAVARDPVQMAHAFRLAVDAGAIARQAGLGNRQRIASATSPLTGFLQHTEVAS
SIO_010081: DDA3937_RS01155
subclass of: SO_0000673
so part of: DDA3937_RS01155
location: complement(265273..266052)
location: region:265273-266052:-1
so has part: feature:265273-266052:-1:exon

WP_013315938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265273-266052:-1:exon

DDA3937_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: thiS
locus tag: DDA3937_RS01160
old locus tag: Dda3937_00232
so part of: sequence
location: complement(266054..266254)
location: region:266054-266254:-1
so has part: feature:266054-266254:-1:exon
subclass of: SO_0000010

9731629
type: Gene
SIO_000068: ncbigene

position:266054:-1
position: 266054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266254:-1
position: 266254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266054-266254:-1:exon

DDA3937_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: thiS
locus tag: DDA3937_RS01160
old locus tag: Dda3937_00232
function: 1.5.3.8 metabolism; building block biosynthesis; cofactor, small molecule carrier; thiamin
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004953956.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfur carrier protein ThiS
translation: MKIRLNDDVIELQDGLTVAQLLGQLERLQPGTALAINQTIIPRDVWTQHALRDGDDILLFQAIAGG
SIO_010081: DDA3937_RS01160
subclass of: SO_0000673
so part of: DDA3937_RS01160
location: complement(266054..266254)
location: region:266054-266254:-1
so has part: feature:266054-266254:-1:exon

WP_013315939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266054-266254:-1:exon

DDA3937_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01165
old locus tag: Dda3937_00233
so part of: sequence
location: complement(266251..267000)
location: region:266251-267000:-1
so has part: feature:266251-267000:-1:exon
subclass of: SO_0000010

9731630
type: Gene
SIO_000068: ncbigene

position:266251:-1
position: 266251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267000:-1
position: 267000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266251-267000:-1:exon

DDA3937_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01165
old locus tag: Dda3937_00233
function: 1.5.3.8 metabolism; building block biosynthesis; cofactor, small molecule carrier; thiamin
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015376324.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HesA/MoeB/ThiF family protein
translation: MLDDQAFMRYSRQLLLEDIGQEGQQKLAAARVLLVGMGGLGSPAALYLAAAGVGTLLLADHDTLHISNLQRQILYRNADLSHPKAVLARHALEAVNPLVKTVALTTRLEGQPLEKAVAQADLVLDCCDNMTTRHAVNAACVAAQKPLISASAVGFSGQLLVLTPPYTHGCYACLYPDASEPQRNCRTAGVLGPVVGVMGTLQALEAIKLLCGLPSPLDGKLRLFDARQHQWSTLQLTRSPACPVCGGLA
SIO_010081: DDA3937_RS01165
subclass of: SO_0000673
so part of: DDA3937_RS01165
location: complement(266251..267000)
location: region:266251-267000:-1
so has part: feature:266251-267000:-1:exon

WP_013315940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266251-267000:-1:exon

DDA3937_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: thiE
locus tag: DDA3937_RS01170
old locus tag: Dda3937_00234
so part of: sequence
location: complement(267002..267637)
location: region:267002-267637:-1
so has part: feature:267002-267637:-1:exon
subclass of: SO_0000010

9731631
type: Gene
SIO_000068: ncbigene

position:267002:-1
position: 267002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267637:-1
position: 267637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267002-267637:-1:exon

DDA3937_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: thiE
locus tag: DDA3937_RS01170
old locus tag: Dda3937_00234
EC number: 2.5.1.3
function: 1.5.3.8 metabolism; building block biosynthesis; cofactor, small molecule carrier; thiamin
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848173.1
GO function: GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine phosphate synthase
translation: MNGAFPATDARLGLYPVVDSVEWIERLLGAGVHTIQLRIKDQPADQAEPDIIRSIALGRRYQARLFINDYWQLAVKHQAYGVHLGQEDLDTADLDAIRAAGLRLGVSTHDDAELARAVAIKPSYIALGHIFPTQTKAMPSAPQGLVELARHIRALDGRFPTVAIGGISIDRVPAVLETGVGSIAVVSAITQAADWRAATATLLRLTEGREA
SIO_010081: DDA3937_RS01170
subclass of: SO_0000673
so part of: DDA3937_RS01170
location: complement(267002..267637)
location: region:267002-267637:-1
so has part: feature:267002-267637:-1:exon

WP_013315941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267002-267637:-1:exon

DDA3937_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: thiC
locus tag: DDA3937_RS01175
old locus tag: Dda3937_00235
so part of: sequence
location: complement(267637..269622)
location: region:267637-269622:-1
so has part: feature:267637-269622:-1:exon
subclass of: SO_0000010

9731632
type: Gene
SIO_000068: ncbigene

position:269622:-1
position: 269622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267637-269622:-1:exon

DDA3937_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: thiC
locus tag: DDA3937_RS01175
old locus tag: Dda3937_00235
EC number: 4.1.99.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012882980.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphomethylpyrimidine synthase ThiC
translation: MSTESKLSTEPTQSTEQNVSGEKKSSGRREQRAAAQQFIDTLRGSTFPNSQRIYLTGSQPDIRVPMREIQLSPTLLGGSRDNPRYEANEAVPVYDTAGPYGDPAITPDVHRGLGKLRADWITGRDDTEALPKASSGFTQQRLADIGLDHLRFEHLPQPKRAKAGRRVTQLHYARQGIITPEMEFIAIRENMGRERVRGEVLRQQHPGHSFGALLPDNITPEFVRQEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGIAENLTWELFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFRDICDICSAYDVALSLGDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKNDVKQGLIAYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPETARAYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVRDYAARQGAQAQPVDVGMAQMSAEFRARGSELYHTATSLPQEER
SIO_010081: DDA3937_RS01175
subclass of: SO_0000673
so part of: DDA3937_RS01175
location: complement(267637..269622)
location: region:267637-269622:-1
so has part: feature:267637-269622:-1:exon

WP_237703442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267637-269622:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 198628
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00059
inference: COORDINATES: profile:INFERNAL:1.1.1
note: TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: thiamine pyrophosphate
so part of: sequence
location: complement(269767..269882)
location: region:269767-269882:-1
so has part: feature:269767-269882:-1:region

position:269767:-1
position: 269767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269882:-1
position: 269882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269767-269882:-1:region

DDA3937_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01180
old locus tag: Dda3937_00236
so part of: sequence
location: complement(269940..270389)
location: region:269940-270389:-1
so has part: feature:269940-270389:-1:exon
subclass of: SO_0000010

9731633
type: Gene
SIO_000068: ncbigene

position:269940:-1
position: 269940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270389:-1
position: 270389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269940-270389:-1:exon

DDA3937_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01180
old locus tag: Dda3937_00236
function: 3.1.2.1 regulation; type of regulation; transcriptional level; sigma factors, anti-sigmafactors
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.3.3 regulation; genetic unit regulated; stimulon
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848171.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rsd/AlgQ family anti-sigma factor
translation: MLKQLQRLTENVGGNYALIDQWLLARKHLLLAYYHLLSIQTGKIPEARTLDEFCHHLVDYLSVGHFHVYERMLQENIMRNDRKLTQASHFDVALRSNTQQIMDIYDSHLAFFIDPVDSQEFRQTLSGVGEALAMRFTLEDSLIRLMFDH
SIO_010081: DDA3937_RS01180
subclass of: SO_0000673
so part of: DDA3937_RS01180
location: complement(269940..270389)
location: region:269940-270389:-1
so has part: feature:269940-270389:-1:exon

WP_013315943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269940-270389:-1:exon

DDA3937_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: nudC
locus tag: DDA3937_RS01185
old locus tag: Dda3937_00237
so part of: sequence
location: 270493..271266
location: region:270493-271266:1
so has part: feature:270493-271266:1:exon
subclass of: SO_0000010

9731634
type: Gene
SIO_000068: ncbigene

position:270493:1
position: 270493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271266:1
position: 271266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270493-271266:1:exon

DDA3937_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: nudC
locus tag: DDA3937_RS01185
old locus tag: Dda3937_00237
EC number: 3.6.1.22
function: 0.1 unknown function; conserved hypothetical product
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019846609.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000210 - NAD+ diphosphatase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(+) diphosphatase
translation: MEVTLKGEESGWWVVYHHHQIWLPQGELPQGTAAQWQLQRQSARQVGEWQGEPVWLVLQDKTSDMGSVRQLLGQDAGLFQLAGRAVQLAEFYRSHRFCGYCGHEMSASTTELACLCLHCKERYYPQIAPCVIVAIRRHDKILLAQHLRHKGNMYTTLAGFVEVGETLEQAVAREVMEESNIRVRNLRYVSSQPWPFPHSLMMAFMADYDGGEVKPDPSELRDADWFRYDRLPELPPPGTVARRLIEDTVVLCREADC
SIO_010081: DDA3937_RS01185
subclass of: SO_0000673
so part of: DDA3937_RS01185
location: 270493..271266
location: region:270493-271266:1
so has part: feature:270493-271266:1:exon

WP_013315944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270493-271266:1:exon

DDA3937_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: hemE
locus tag: DDA3937_RS01190
old locus tag: Dda3937_00238
so part of: sequence
location: 271322..272395
location: region:271322-272395:1
so has part: feature:271322-272395:1:exon
subclass of: SO_0000010

9731635
type: Gene
SIO_000068: ncbigene

position:271322:1
position: 271322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272395:1
position: 272395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271322-272395:1:exon

DDA3937_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: hemE
locus tag: DDA3937_RS01190
old locus tag: Dda3937_00238
EC number: 4.1.1.37
function: 1.5.3.12 metabolism; building block biosynthesis; cofactor, small molecule carrier; heme, porphyrine
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019846610.1
GO function: GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uroporphyrinogen decarboxylase
translation: MTDLKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYRATRSQAGDFMSLCKNAELACEVTLQPLRRYNLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCHADVEKLPVPDPEQELGYVMNAVRTIRRNLAGAVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPRTLHLLLDKLADSVTLYLNAQIRAGAQAVMIFDTWGGALSGADYREFSLHYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMADTGCDALGLDWTTDIADARRRVGDRVALQGNMDPSMLYAPPARIEQEVATILAGFGAGNGHVFNLGHGIHQDVPPEHAGAFVEAVHRLSAPYHQDLA
SIO_010081: DDA3937_RS01190
subclass of: SO_0000673
so part of: DDA3937_RS01190
location: 271322..272395
location: region:271322-272395:1
so has part: feature:271322-272395:1:exon

WP_013315945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271322-272395:1:exon

DDA3937_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: nfi
locus tag: DDA3937_RS01195
old locus tag: Dda3937_00239
so part of: sequence
location: 272395..273069
location: region:272395-273069:1
so has part: feature:272395-273069:1:exon
subclass of: SO_0000010

9731636
type: Gene
SIO_000068: ncbigene

position:273069:1
position: 273069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272395-273069:1:exon

DDA3937_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: nfi
locus tag: DDA3937_RS01195
old locus tag: Dda3937_00239
EC number: 3.1.21.7
function: 1.2.2 metabolism; macromolecule degradation; DNA
function: 2.1.5 information transfer; DNA related; DNA degradation
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019846611.1
GO function: GO:0004519 - endonuclease activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: cleaves DNA at apurinic or apyrimidinic sites; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: deoxyribonuclease V
translation: MDMQALREEQRDKAVQVIRHDDVPFEQPTLIAGADVGFEQDGAVTRAALAVLTYPSLQLVEYQIARIPTIMPYIPGFLSFREYPALLAAWEQLQHRPDLLFVDGHGVSHPRRLGVASHFGLLVNVPTIGVAKRRLCGQFAPLEDAVGSRQPLLDKDEQIGWVWRSKARCNPLFVSTGHRIGVDSALQWVMRCMNGYRLPEPTRWADAVASNRPAFQRWQRQAGL
SIO_010081: DDA3937_RS01195
subclass of: SO_0000673
so part of: DDA3937_RS01195
location: 272395..273069
location: region:272395-273069:1
so has part: feature:272395-273069:1:exon

WP_013315946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272395-273069:1:exon

DDA3937_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01200
old locus tag: Dda3937_00240
so part of: sequence
location: 273161..273751
location: region:273161-273751:1
so has part: feature:273161-273751:1:exon
subclass of: SO_0000010

9731637
type: Gene
SIO_000068: ncbigene

position:273161:1
position: 273161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273751:1
position: 273751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273161-273751:1:exon

DDA3937_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01200
old locus tag: Dda3937_00240
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:NP_463038.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YjaG family protein
translation: MLRNPIHLRLEKLTSWQHVTFMACLCERMYPNYHEFCQQTGFGDAQLYRRMLDLVWETLVVKDAKVNFDSQLEKLEDAIPAADDYDIYGVYPAIDACVALSELLHSRLSGETLEHAITISEMSIRTVAMLEMTQAGREMTDEELKVVPAVEEEWDIQWEIFRLLADCEERDVELIKGLRADLRESGISNIGINLYQ
SIO_010081: DDA3937_RS01200
subclass of: SO_0000673
so part of: DDA3937_RS01200
location: 273161..273751
location: region:273161-273751:1
so has part: feature:273161-273751:1:exon

WP_013315947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273161-273751:1:exon

DDA3937_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: hupA
locus tag: DDA3937_RS01205
old locus tag: Dda3937_00241
so part of: sequence
location: 273939..274211
location: region:273939-274211:1
so has part: feature:273939-274211:1:exon
subclass of: SO_0000010

9731638
type: Gene
SIO_000068: ncbigene

position:273939:1
position: 273939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274211:1
position: 274211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273939-274211:1:exon

DDA3937_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: hupA
locus tag: DDA3937_RS01205
old locus tag: Dda3937_00241
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoid-associated protein HU-alpha
translation: MNKTQLIDVIADKADLSKTQAKAALEATLAAITESLKEGDAVQLVGFGTFKVNHRNERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVK
SIO_010081: DDA3937_RS01205
subclass of: SO_0000673
so part of: DDA3937_RS01205
location: 273939..274211
location: region:273939-274211:1
so has part: feature:273939-274211:1:exon

WP_012882985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273939-274211:1:exon

DDA3937_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01210
old locus tag: Dda3937_00242
so part of: sequence
location: 274216..274926
location: region:274216-274926:1
so has part: feature:274216-274926:1:exon
subclass of: SO_0000010

9731639
type: Gene
SIO_000068: ncbigene

position:274216:1
position: 274216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274926:1
position: 274926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274216-274926:1:exon

DDA3937_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01210
old locus tag: Dda3937_00242
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012882986.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1481 domain-containing protein
translation: MLIQGLSRGAISPLLLFFRRHIRFAAPALVCWLSACSSSTPSPAVYASGYLADSGVVRLWRKDDAPQHLTTLVTALSPLQGQDARITRYRFQQGVLREVQQTYSASAREEVRLRFDQAGTVSYMQRQLPDRRESLSEDEIALFQFDARRLLELSDSLRAGKVSLMQGRWNAGQVITCDGQTVRPDLDRASLAWIAQRAERATGPLSVAWLVSPEGTQLLQVAEADFCRWVPTVEAW
SIO_010081: DDA3937_RS01210
subclass of: SO_0000673
so part of: DDA3937_RS01210
location: 274216..274926
location: region:274216-274926:1
so has part: feature:274216-274926:1:exon

WP_013315948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274216-274926:1:exon

DDA3937_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: purD
locus tag: DDA3937_RS01215
old locus tag: Dda3937_00243
so part of: sequence
location: complement(275011..276300)
location: region:275011-276300:-1
so has part: feature:275011-276300:-1:exon
subclass of: SO_0000010

9731640
type: Gene
SIO_000068: ncbigene

position:275011:-1
position: 275011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276300:-1
position: 276300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275011-276300:-1:exon

DDA3937_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: purD
locus tag: DDA3937_RS01215
old locus tag: Dda3937_00243
EC number: 6.3.4.13
function: 1.5.2.1 metabolism; building block biosynthesis; nucleotide; purine biosynthesis
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012882987.1
GO function: GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylamine--glycine ligase
translation: MNILIIGNGGREHALAWKAAQSPLADKVYVAPGNAGTALEPALENVNIAATDIPALLDFARQNTIGLTIVGPEAPLVIGVVDAFRAAGLKIFGPTQAAAQLEGSKAFTKDFLARQHIPTAEYQNFTEIEPALAYIRRKGAPIVIKADGLAAGKGVIVAMTLEEAENAATDMLAGNAFGDAGHRIVVEEFLDGEEASFIVMVDGEHVLPMATSQDHKRVGDKDTGPNTGGMGAYSPAPVVTDEVHQRVMDQIIWPTVRGMAAEGNVYTGFLYAGLMISADGQPKVIEFNCRFGDPETQPIMLRLKSDLVELCLAACDGKLDEKTSDWDARPSLGVVLAAGGYPADYRNGDVISGLPTQDATDGKVFHAGTRLNGDDVVTNGGRVLCVTALGHSVAEAQQRAYELAKPISWEGSFCRSDIGYRAIAREQKI
SIO_010081: DDA3937_RS01215
subclass of: SO_0000673
so part of: DDA3937_RS01215
location: complement(275011..276300)
location: region:275011-276300:-1
so has part: feature:275011-276300:-1:exon

WP_013315949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275011-276300:-1:exon

DDA3937_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: purH
locus tag: DDA3937_RS01220
old locus tag: Dda3937_00244
so part of: sequence
location: complement(276316..277905)
location: region:276316-277905:-1
so has part: feature:276316-277905:-1:exon
subclass of: SO_0000010

9731641
type: Gene
SIO_000068: ncbigene

position:276316:-1
position: 276316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277905:-1
position: 277905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276316-277905:-1:exon

DDA3937_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: purH
locus tag: DDA3937_RS01220
old locus tag: Dda3937_00244
EC number: 2.1.2.3
EC number: 3.5.4.10
function: 1.5.2.1 metabolism; building block biosynthesis; nucleotide; purine biosynthesis
function: 1.7.33 metabolism; central intermediary metabolism; nucleotide and nucleoside conversions
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1
GO function: GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
translation: MQQRRPIRRALLSVSDKAGIVEFAQALSQRGIDLLSTGGTARLLADAGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDAIMTQHNIQPIDMVVVNLYPFAQTVAKADCTLEDAVENIDIGGPTMVRSAAKNHNDVAIVVKSSDYTAIITEMDANEGSLTYETRFDLAIKAFEHTAAYDSMIANYFGSKVPAYHGDTTQPSGHFPRTLNLNFIKKQDMRYGENSHQQAAFYIEEKVAEASVATAQQLQGKALSYNNIADTDAALECVKEFVEPACVIVKHANPCGVAIGDSILDAYERAYKTDPTSAFGGIIAFNRELDEATAQAIISRQFVEVIIAPSASEAALKVTAAKQNVRVLTCGQWQQRVSGLDFKRVNGGLLVQDRDLGMVEAAQLRVVTERQPTEAELRDALFCWKVAKFVKSNAIVYARDNMTIGIGAGQMSRVYSAKIAGIKAGDEGLEVKGSVMASDAFFPFRDGIDAAAAVGITCVIQPGGSIRDDEVIAAANEHGIAMLFTDMRHFRH
SIO_010081: DDA3937_RS01220
subclass of: SO_0000673
so part of: DDA3937_RS01220
location: complement(276316..277905)
location: region:276316-277905:-1
so has part: feature:276316-277905:-1:exon

WP_013315950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276316-277905:-1:exon

DDA3937_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01225
old locus tag: Dda3937_04665
so part of: sequence
location: 278505..280046
location: region:278505-280046:1
so has part: feature:278505-280046:1:exon
subclass of: SO_0000573

9731643
type: Gene
SIO_000068: ncbigene

position:278505:1
position: 278505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280046:1
position: 280046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278505-280046:1:exon

DDA3937_RS01225
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 198628
locus tag: DDA3937_RS01225
old locus tag: Dda3937_04665
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DDA3937_RS01225
subclass of: SO_0000673
so part of: DDA3937_RS01225
location: 278505..280046
location: region:278505-280046:1
so has part: feature:278505-280046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278505-280046:1:exon

DDA3937_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01230
old locus tag: Dda3937_04247
so part of: sequence
location: 280117..280193
location: region:280117-280193:1
so has part: feature:280117-280193:1:exon
subclass of: SO_0000663

9731644
type: Gene
SIO_000068: ncbigene

position:280117:1
position: 280117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280193:1
position: 280193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280117-280193:1:exon

DDA3937_RS01230
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 198628
locus tag: DDA3937_RS01230
old locus tag: Dda3937_04247
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:280151..280153,aa:Ile,seq:gat)
SIO_010081: DDA3937_RS01230
subclass of: SO_0000673
so part of: DDA3937_RS01230
location: 280117..280193
location: region:280117-280193:1
so has part: feature:280117-280193:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280117-280193:1:exon

DDA3937_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01235
old locus tag: Dda3937_04248
so part of: sequence
location: 280298..280373
location: region:280298-280373:1
so has part: feature:280298-280373:1:exon
subclass of: SO_0000663

9731645
type: Gene
SIO_000068: ncbigene

position:280298:1
position: 280298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280373:1
position: 280373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280298-280373:1:exon

DDA3937_RS01235
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 198628
locus tag: DDA3937_RS01235
old locus tag: Dda3937_04248
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:280331..280333,aa:Ala,seq:tgc)
SIO_010081: DDA3937_RS01235
subclass of: SO_0000673
so part of: DDA3937_RS01235
location: 280298..280373
location: region:280298-280373:1
so has part: feature:280298-280373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280298-280373:1:exon

DDA3937_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01240
old locus tag: Dda3937_04222
so part of: sequence
location: 280542..283449
location: region:280542-283449:1
so has part: feature:280542-283449:1:exon
subclass of: SO_0000573

9731646
type: Gene
SIO_000068: ncbigene

position:280542:1
position: 280542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283449:1
position: 283449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280542-283449:1:exon

DDA3937_RS01240
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 198628
locus tag: DDA3937_RS01240
old locus tag: Dda3937_04222
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DDA3937_RS01240
subclass of: SO_0000673
so part of: DDA3937_RS01240
location: 280542..283449
location: region:280542-283449:1
so has part: feature:280542-283449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280542-283449:1:exon

DDA3937_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rrf
locus tag: DDA3937_RS01245
old locus tag: Dda3937_04223
so part of: sequence
location: 283558..283673
location: region:283558-283673:1
so has part: feature:283558-283673:1:exon
subclass of: SO_0000573

9731647
type: Gene
SIO_000068: ncbigene

position:283558:1
position: 283558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283673:1
position: 283673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283558-283673:1:exon

DDA3937_RS01245
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 198628
gene: rrf
locus tag: DDA3937_RS01245
old locus tag: Dda3937_04223
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DDA3937_RS01245
subclass of: SO_0000673
so part of: DDA3937_RS01245
location: 283558..283673
location: region:283558-283673:1
so has part: feature:283558-283673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283558-283673:1:exon

DDA3937_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01250
old locus tag: Dda3937_04441
so part of: sequence
location: complement(283931..284167)
location: region:283931-284167:-1
so has part: feature:283931-284167:-1:exon
subclass of: SO_0000010

9731648
type: Gene
SIO_000068: ncbigene

position:283931:-1
position: 283931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284167:-1
position: 284167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283931-284167:-1:exon

DDA3937_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01250
old locus tag: Dda3937_04441
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014728259.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-guanine dinucleotide biosynthesis protein MobB
translation: MHWDQHAKDFKHEPVDKILLYRHGPGGDIAALIDADTLAVATDTALTLALPCLDLNQPAQIAVFIRDWLRRRTGAAGD
SIO_010081: DDA3937_RS01250
subclass of: SO_0000673
so part of: DDA3937_RS01250
location: complement(283931..284167)
location: region:283931-284167:-1
so has part: feature:283931-284167:-1:exon

WP_013315952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283931-284167:-1:exon

DDA3937_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01255
old locus tag: Dda3937_01575
so part of: sequence
location: complement(284244..285005)
location: region:284244-285005:-1
so has part: feature:284244-285005:-1:exon
subclass of: SO_0000010

9731649
type: Gene
SIO_000068: ncbigene

position:284244:-1
position: 284244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285005:-1
position: 285005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284244-285005:-1:exon

DDA3937_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01255
old locus tag: Dda3937_01575
function: 4.3.A.1.a transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP binding cytoplasmic component
function: 7.1 location of gene products; cytoplasm
function: 4.S.12 transport; substrate; amino acid
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005121393.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter ATP-binding protein
translation: MNQDTLTSSSDYMITLENVNKWYGQFHVLKNINLQVKQGERIVLCGPSGSGKSTTIRCINHLEEHQQGRIVVDGIELNHDSRNIEKIRTEVGMVFQHFNLFPHLTVLQNCTLAPSWVRNMPKKEAEELAMHYLERVRIAAHAHKYPGQLSGGQQQRVAIARSLCMKPKIMLFDEPTSALDPEMVKEVLDTMLGLAEDGMTMLCVTHEMGFARTVANRVIFMDQGEIVEQAPPDIFFSRPRSERTQTFLAQILH
SIO_010081: DDA3937_RS01255
subclass of: SO_0000673
so part of: DDA3937_RS01255
location: complement(284244..285005)
location: region:284244-285005:-1
so has part: feature:284244-285005:-1:exon

WP_013315953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284244-285005:-1:exon

DDA3937_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01260
old locus tag: Dda3937_01576
so part of: sequence
location: complement(285014..286108)
location: region:285014-286108:-1
so has part: feature:285014-286108:-1:exon
subclass of: SO_0000010

9731650
type: Gene
SIO_000068: ncbigene

position:285014:-1
position: 285014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286108:-1
position: 286108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285014-286108:-1:exon

DDA3937_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01260
old locus tag: Dda3937_01576
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 4.S.12 transport; substrate; amino acid
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943141.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MTMITHTPSNPTPINRAIVWARRNLFSSITNSVLTLACLWLLWTLIPPLLNWAILKANWIGSTRADCTSDGACWVFIHARFEQFMYGLYPREELWRINFALVLALISILPMFWRNLPHRGRYIAVWCVIYPLIAWWLLFGGFGGLTRVETRQWGGLTLTIIIAAIGIAGALPLGILLALGRRSNMPVLRALCVIFIEFWRGVPLITVLFMSSVMLPLFLTEGTNIDKLLRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAQSLALGYWRMQGLVILPQALKMVIPGLVNTIIALFKDTSLVIIIGLFDLFSSIQQATVDPAWLGMSTEGYVFAAILYWIFCFSMSRYSQHLEKRFDTGRKSH
SIO_010081: DDA3937_RS01260
subclass of: SO_0000673
so part of: DDA3937_RS01260
location: complement(285014..286108)
location: region:285014-286108:-1
so has part: feature:285014-286108:-1:exon

WP_013315954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285014-286108:-1:exon

DDA3937_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01265
old locus tag: Dda3937_01577
so part of: sequence
location: complement(286118..287296)
location: region:286118-287296:-1
so has part: feature:286118-287296:-1:exon
subclass of: SO_0000010

9731651
type: Gene
SIO_000068: ncbigene

position:286118:-1
position: 286118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287296:-1
position: 287296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286118-287296:-1:exon

DDA3937_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01265
old locus tag: Dda3937_01577
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 4.S.12 transport; substrate; amino acid
function: 1.1.3 metabolism; carbon utilization; amino acids
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012882991.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MLQRPTVKGDLSLTNPAVRAWLYQILAVVIVVVTVGYLLHNTVTNLAQRGITSGFAFLNNSADFGIVQHLIDYEQGDTYARVFVVGLLNTLLVSAICIVCASLLGFIVGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQAVNALDTFFLSNRGLYIPAAEFGPGALPSILALIIALVVGAMIFRRNKRYHALTGQQRRSWPIPLAVLVVLLGLSHLIFGRALHWDFPVLKGFNFSGGMVLIPELAALALALSVYTSSFIAEIIRSGIQSVSYGQHEAALSLGLPKPVTLRKVILPQALRVIIPPLTSQYLNVVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISLLMNIYNRKIALIER
SIO_010081: DDA3937_RS01265
subclass of: SO_0000673
so part of: DDA3937_RS01265
location: complement(286118..287296)
location: region:286118-287296:-1
so has part: feature:286118-287296:-1:exon

WP_013315955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286118-287296:-1:exon

DDA3937_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01270
old locus tag: Dda3937_01578
so part of: sequence
location: complement(287369..288394)
location: region:287369-288394:-1
so has part: feature:287369-288394:-1:exon
subclass of: SO_0000010

9731652
type: Gene
SIO_000068: ncbigene

position:287369:-1
position: 287369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288394:-1
position: 288394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287369-288394:-1:exon

DDA3937_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01270
old locus tag: Dda3937_01578
function: 4.3.A.1.p transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, periplasmic binding component
function: 1.1.3 metabolism; carbon utilization; amino acids
function: 7.2 location of gene products; periplasmic space
function: 4.S.12 transport; substrate; amino acid
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312168.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter substrate-binding protein
translation: MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGIDVDVCRGVAAAIFGDANKVKFTPLTAKERFTALQSGEVDLLSRNTTWTSSRDGGMGLLFTGVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRSDESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWYAIVRWTLFAMLNAEEMGITSQNVDQMAAKPTTPDMSHLLGKEGNYGKDLKLPADWAYKIVKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAIR
SIO_010081: DDA3937_RS01270
subclass of: SO_0000673
so part of: DDA3937_RS01270
location: complement(287369..288394)
location: region:287369-288394:-1
so has part: feature:287369-288394:-1:exon

WP_013315956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287369-288394:-1:exon

DDA3937_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01275
old locus tag: Dda3937_01579
so part of: sequence
location: complement(288691..289386)
location: region:288691-289386:-1
so has part: feature:288691-289386:-1:exon
subclass of: SO_0000010

9731653
type: Gene
SIO_000068: ncbigene

position:288691:-1
position: 288691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289386:-1
position: 289386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288691-289386:-1:exon

DDA3937_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01275
old locus tag: Dda3937_01579
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CTP synthase
translation: MKQIVRIALIGDYTPTVTAHQAIPPALDLAARQLDLTTQYQWIDSELLSPASQLDAFDAVWCVPASPYRHDDNILQAIRFARETHIPFLGTCGGCQYALLEYARHVLSWHDANNAEVTQEGRAVISPLQCEMVEKQGDIRLSPDSRIGRAYGRDAIAEGYRCRYGINEAFRDAFTTAGVRVSGVDDNGDIRAVELTDHPFFVGTLFQPERAALKQIAPPLAIALLEAASVR
SIO_010081: DDA3937_RS01275
subclass of: SO_0000673
so part of: DDA3937_RS01275
location: complement(288691..289386)
location: region:288691-289386:-1
so has part: feature:288691-289386:-1:exon

WP_033111525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288691-289386:-1:exon

DDA3937_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01280
old locus tag: Dda3937_01580
so part of: sequence
location: complement(289501..290166)
location: region:289501-290166:-1
so has part: feature:289501-290166:-1:exon
subclass of: SO_0000010

9731654
type: Gene
SIO_000068: ncbigene

position:289501:-1
position: 289501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290166:-1
position: 290166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289501-290166:-1:exon

DDA3937_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01280
old locus tag: Dda3937_01580
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 4.S.12 transport; substrate; amino acid
function: 1.1.3 metabolism; carbon utilization; amino acids
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005975327.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MPSWLQLMADSFWSLLSAGLTFTVPLAILSFVLGLMIGVLVALLRLYGPTPLKKICDFYVWMIRGTPLLVQLFLIFYGLPNAGITLDAFPAALIGFSLNVGAYSSEIVRGAILSVPKGQWNAAYSLGMSGAQAIRWVIVPQSVFVSLPPLANTFISLVKDTSLAAVITVPEMFLAAQRIVSVTYEPLILYIEAALIYLLFSTVLSKLQTRLEKYYQRHIVH
SIO_010081: DDA3937_RS01280
subclass of: SO_0000673
so part of: DDA3937_RS01280
location: complement(289501..290166)
location: region:289501-290166:-1
so has part: feature:289501-290166:-1:exon

WP_013315958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289501-290166:-1:exon

DDA3937_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01285
old locus tag: Dda3937_01581
so part of: sequence
location: complement(290192..290962)
location: region:290192-290962:-1
so has part: feature:290192-290962:-1:exon
subclass of: SO_0000010

9731655
type: Gene
SIO_000068: ncbigene

position:290192:-1
position: 290192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290962:-1
position: 290962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290192-290962:-1:exon

DDA3937_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01285
old locus tag: Dda3937_01581
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014913818.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter substrate-binding protein
translation: MKKSRLALLTGALLVTSALAQAQDDLSAIKAAGVIKFGTEGTYAPYTYHDASGKLVGFDVDVGRAVAEKLGVKAEFVEGRWDGLIAGVDAKRYDAVINQVGVTKERRAKYDFTKPYIDAKSVLIVRGDNTGIKSFNDLKGHKSAQSLTSNYSKLATSYGAEIVPTDGFNQSLELVLSGRAEATLNDNLSFLDFKKHKPDANVKVVATAESGDPSAILVRKNQPQLVDALNNALDQIKADGTYKTISVRYFGQDVSK
SIO_010081: DDA3937_RS01285
subclass of: SO_0000673
so part of: DDA3937_RS01285
location: complement(290192..290962)
location: region:290192-290962:-1
so has part: feature:290192-290962:-1:exon

WP_033111526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290192-290962:-1:exon

DDA3937_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01290
old locus tag: Dda3937_01582
so part of: sequence
location: 291208..292350
location: region:291208-292350:1
so has part: feature:291208-292350:1:exon
subclass of: SO_0000010

9731656
type: Gene
SIO_000068: ncbigene

position:291208:1
position: 291208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292350:1
position: 292350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291208-292350:1:exon

DDA3937_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01290
old locus tag: Dda3937_01582
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843538.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease
translation: MKLRLASYNVENLFHRTAILNLPDPQQSSELLEKVRQLQTLLDADKYDDALKDRVFTLTSNLQPYVDLRVDGGSLGSWKNEAGKTGFRINKSCQGRGDWLGELVFRAEAFGDQQRKNTGLVIKALNADILCAVEVENMAVLRDFNQQILADRAFAQYVMIDSPNDPRGIDVACLTRHRITQLRTHIFDVSESFKPLFSRDCLEVTIDVGLPQPVHVLCNHFKSQNGRNDDERERAAKRRRAQAERVAEIVRGYNLQQEYVVVMGDLNEDVANPWHSLAPLFSVPDLHPAIDPSLPETARYTYYFSGGKAGERLNQLDYIFISTPLHQAKVTCGIERRGIYNIDKITAKEGAEPVTPFPTVTSWDTAASDHAAVWVELDIR
SIO_010081: DDA3937_RS01290
subclass of: SO_0000673
so part of: DDA3937_RS01290
location: 291208..292350
location: region:291208-292350:1
so has part: feature:291208-292350:1:exon

WP_013315960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291208-292350:1:exon

DDA3937_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01295
old locus tag: Dda3937_01583
so part of: sequence
location: 292556..293398
location: region:292556-293398:1
so has part: feature:292556-293398:1:exon
subclass of: SO_0000010

9731657
type: Gene
SIO_000068: ncbigene

position:292556:1
position: 292556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293398:1
position: 293398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292556-293398:1:exon

DDA3937_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01295
old locus tag: Dda3937_01583
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013200595.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MSQRIWLITGVSTGFGRELTQQLLAKGDRVVGTVRNLASVQPLMDQWPETFHPEILDVTDTDAIAGVVERTFKRFGRIDVAISNAGYGLFGAAEELSDRQIEQMIATNLLGSIQFIRGVIPIMRQQGGGRIIQISSYGGQVAFPGNSLYHATKWGIEGFVESVAQEVAPFGIGMTLVEPGGARTEFRYGSAQVAALMPVYDATPAHAFLRMLDPANGLAPGDPARMATRIIESVDRQPAPLRMVLGSQALQGMIDVLRERLRDFEQQVELAASTDFPPGT
SIO_010081: DDA3937_RS01295
subclass of: SO_0000673
so part of: DDA3937_RS01295
location: 292556..293398
location: region:292556-293398:1
so has part: feature:292556-293398:1:exon

WP_033112185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292556-293398:1:exon

DDA3937_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01300
old locus tag: Dda3937_01584
so part of: sequence
location: complement(293476..294369)
location: region:293476-294369:-1
so has part: feature:293476-294369:-1:exon
subclass of: SO_0000010

9731658
type: Gene
SIO_000068: ncbigene

position:293476:-1
position: 293476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294369:-1
position: 294369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293476-294369:-1:exon

DDA3937_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01300
old locus tag: Dda3937_01584
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2 regulation; type of regulation; transcriptional level
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848154.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MLKENFSDLISFRMVAQEKSFTRAAAKLGISQSALSHAMRSLEERLGIRLLTRTTRSVSLTEAGERLLGNISPSLNELEFALEDLGEMRDKPAGNIRLTAGEHAVNFVLWPVLKPFLSQHPDIHLEITVDNTLTDIVNERFDAGVRLGEQVAKDMIAVRIGPDMRMAVVGSPAYFANHTAPDTPQSLQQHRCINMRLPTLGGLFAWEFSRDGREIRVRVDGQLTFNNLQHRIDAALSGLGLAYVPEDTIRQAVADGRLIQVLESWCEPFPGYYLYYPSRKQHTAAFSLFIDALRYRG
SIO_010081: DDA3937_RS01300
subclass of: SO_0000673
so part of: DDA3937_RS01300
location: complement(293476..294369)
location: region:293476-294369:-1
so has part: feature:293476-294369:-1:exon

WP_013315962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293476-294369:-1:exon

DDA3937_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01305
old locus tag: Dda3937_01585
so part of: sequence
location: 294682..295077
location: region:294682-295077:1
so has part: feature:294682-295077:1:exon
subclass of: SO_0000010

9731659
type: Gene
SIO_000068: ncbigene

position:294682:1
position: 294682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295077:1
position: 295077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294682-295077:1:exon

DDA3937_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01305
old locus tag: Dda3937_01585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848153.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MKIIRNGSQPSRPGPEAWFTGHVRIDAPFQATEPARVGGAIVTFEPGARTAWHTHPLGQTLIVVQGRGWVQEWGKEIHEMNPGDIVWIPEGVKHWHGATAETAMTHIAIAESLDGSAVEWMEHVSDEQYPK
SIO_010081: DDA3937_RS01305
subclass of: SO_0000673
so part of: DDA3937_RS01305
location: 294682..295077
location: region:294682-295077:1
so has part: feature:294682-295077:1:exon

WP_033111527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294682-295077:1:exon

DDA3937_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01310
old locus tag: Dda3937_01586
so part of: sequence
location: 295092..295301
location: region:295092-295301:1
so has part: feature:295092-295301:1:exon
subclass of: SO_0000010

9731660
type: Gene
SIO_000068: ncbigene

position:295092:1
position: 295092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295301:1
position: 295301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295092-295301:1:exon

DDA3937_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01310
old locus tag: Dda3937_01586
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWLRMMPGAVESELVRSITDPNMAAGVKSFYDDYAISAESFARVVAFAIRLPEDVDINDVLFRPTRLEL
SIO_010081: DDA3937_RS01310
subclass of: SO_0000673
so part of: DDA3937_RS01310
location: 295092..295301
location: region:295092-295301:1
so has part: feature:295092-295301:1:exon

WP_148226853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295092-295301:1:exon

DDA3937_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01315
old locus tag: Dda3937_01587
so part of: sequence
location: 295332..296384
location: region:295332-296384:1
so has part: feature:295332-296384:1:exon
subclass of: SO_0000010

9731661
type: Gene
SIO_000068: ncbigene

position:295332:1
position: 295332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296384:1
position: 296384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295332-296384:1:exon

DDA3937_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01315
old locus tag: Dda3937_01587
EC number: 1.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848151.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent alcohol dehydrogenase
translation: MTMKVLGYAAQSSAAPLAPFHFTRRTPRPDDVVVEILYCGVCHSDLHQARNDWGFSHYPLVPGHEIIGRVTAVGAGVTKFKPDDLVGIGCMVDSCRECQPCKQGLEQYCDEGNVQTYNGVDRHDHLPTYGGYSQQIVASQDFVLRIPASMDLKSAAPLLCAGITTWSPLRHWNVGKGSKVAVVGLGGLGHMAIKLAHALGAEVTLFTRSPGKEADARRLGADRIVLSTAASQMETVKGQFDLIIDTVPYEHDINPYMPTLTVDGTLVFVGLLGDINPMLNTVSMILGRRSVAGSCIGGIAETQEMLDFCGEHGITSDVEMIDIQNINAAYERMLKSDVKYRFVIDMASLA
SIO_010081: DDA3937_RS01315
subclass of: SO_0000673
so part of: DDA3937_RS01315
location: 295332..296384
location: region:295332-296384:1
so has part: feature:295332-296384:1:exon

WP_033111529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295332-296384:1:exon

DDA3937_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01320
old locus tag: Dda3937_01588
so part of: sequence
location: 296712..297932
location: region:296712-297932:1
so has part: feature:296712-297932:1:exon
subclass of: SO_0000010

9731662
type: Gene
SIO_000068: ncbigene

position:296712:1
position: 296712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297932:1
position: 297932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296712-297932:1:exon

DDA3937_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01320
old locus tag: Dda3937_01588
function: 8.1.4 extrachromosomal; prophage genes and phage related functions; Integration, recombination
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016808172.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MAGGTNKLSDTSLRKMMGRESPGDSFYADGDGLSVKVSKIGVMTWYFTFRVGGRSAAPQRIKLGNYPDLSLKAAREKREQCRAWLAEGKNPRHQLSIATQESLKPITVKEALEYWIREYATHKRANVNKHIEQLKKHIYPYIGDYPLSMCETRHWLECFSRVRSEAPVAAGYLLQMCKQALKFCRVHRYADSNALSDLTIDDVGSKQNKRDRVHSRQELADIWRESTGQKFKPYYASLLHLLVVFGCRTQELRFSLISEWDLDDWVWTVPREHSKGGEKILRPIPEAIRPFVVALCNQHKDSGLLLGEIKSSEAVSQWGRGIYKRLGHSEPWTLHDLRRTFSTTLNNMGIAPHVVEQLLGHTLGGVMAVYNRSQYLPEKLDALNKWMERLELISSEHSNVTIFKVK
SIO_010081: DDA3937_RS01320
subclass of: SO_0000673
so part of: DDA3937_RS01320
location: 296712..297932
location: region:296712-297932:1
so has part: feature:296712-297932:1:exon

WP_013315966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296712-297932:1:exon

DDA3937_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01325
old locus tag: Dda3937_01589
so part of: sequence
location: 297932..298669
location: region:297932-298669:1
so has part: feature:297932-298669:1:exon
subclass of: SO_0000010

9731663
type: Gene
SIO_000068: ncbigene

position:298669:1
position: 298669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297932-298669:1:exon

DDA3937_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01325
old locus tag: Dda3937_01589
function: 0 unknown function
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVKKPERLYYPLHEAAEKLECSIKDIIHYGAIGALCISVYMFNNKGDNQSDIFYLDALKFKVDDDLPSHFLGDKYLIADIHFNHSPYGWCASFLKGFFYINAVSLTLAEFEINSGSIKIDKLSTAKNALDSIDIYFMNDEGLYELPISRLCVMAEEIDNINQAVKINAFINQEKESDKTVAKKEVLIKSLLRLIPDFYDVDIEAMPVKKIKELLEVTAAQKGIDFPKTDLGTWSKYLERGRHKK
SIO_010081: DDA3937_RS01325
subclass of: SO_0000673
so part of: DDA3937_RS01325
location: 297932..298669
location: region:297932-298669:1
so has part: feature:297932-298669:1:exon

WP_013315967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297932-298669:1:exon

DDA3937_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01330
old locus tag: Dda3937_01590
so part of: sequence
location: 298760..298984
location: region:298760-298984:1
so has part: feature:298760-298984:1:exon
subclass of: SO_0000010

9731664
type: Gene
SIO_000068: ncbigene

position:298760:1
position: 298760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298984:1
position: 298984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298760-298984:1:exon

DDA3937_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01330
old locus tag: Dda3937_01590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001553505.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AlpA family phage regulatory protein
translation: MNHLKQSKQTTERLIREGECRQLTGLCRTTRYLMEKKGKFPSRRKLGGRSVGWMLSEILEWQHQQPKVIFEKAA
SIO_010081: DDA3937_RS01330
subclass of: SO_0000673
so part of: DDA3937_RS01330
location: 298760..298984
location: region:298760-298984:1
so has part: feature:298760-298984:1:exon

WP_033111530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298760-298984:1:exon

DDA3937_RS23390
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23390
so part of: sequence
location: complement(299096..299290)
location: region:299096-299290:-1
so has part: feature:299096-299290:-1:exon
subclass of: SO_0000010

56705087
type: Gene
SIO_000068: ncbigene

position:299096:-1
position: 299096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299290:-1
position: 299290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299096-299290:-1:exon

DDA3937_RS23390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005133579.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YlcI/YnfO family protein
translation: MATGSVNNKSQQLNARFPHDVVAELENSLEIGETKAQFIVTAVKGEIKRRQRKQSRQDKQPDAE
SIO_010081: DDA3937_RS23390
subclass of: SO_0000673
so part of: DDA3937_RS23390
location: complement(299096..299290)
location: region:299096-299290:-1
so has part: feature:299096-299290:-1:exon

WP_033111531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299096-299290:-1:exon

DDA3937_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01340
old locus tag: Dda3937_04443
so part of: sequence
location: 299480..299701
location: region:299480-299701:1
so has part: feature:299480-299701:1:exon
subclass of: SO_0000010

9731666
type: Gene
SIO_000068: ncbigene

position:299480:1
position: 299480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299701:1
position: 299701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299480-299701:1:exon

DDA3937_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01340
old locus tag: Dda3937_04443
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005968174.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADKQSTQTHAKFTRAAHITHAEEAVTQVVYAMSIIRLIAAQDVGGPVVENSLDAVIEILEKAETELVEVCRG
SIO_010081: DDA3937_RS01340
subclass of: SO_0000673
so part of: DDA3937_RS01340
location: 299480..299701
location: region:299480-299701:1
so has part: feature:299480-299701:1:exon

WP_013315970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299480-299701:1:exon

DDA3937_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01345
old locus tag: Dda3937_01591
so part of: sequence
location: 299694..299909
location: region:299694-299909:1
so has part: feature:299694-299909:1:exon
subclass of: SO_0000010

9731667
type: Gene
SIO_000068: ncbigene

position:299694:1
position: 299694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299909:1
position: 299909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299694-299909:1:exon

DDA3937_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01345
old locus tag: Dda3937_01591
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014657959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKPIPLDLAAYRAGLNSSLFEVIISKAAEENVSGQLADLIAIACDLNEEIRDVLAKAVEKRGVIVHGVER
SIO_010081: DDA3937_RS01345
subclass of: SO_0000673
so part of: DDA3937_RS01345
location: 299694..299909
location: region:299694-299909:1
so has part: feature:299694-299909:1:exon

WP_013315971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299694-299909:1:exon

DDA3937_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01350
old locus tag: Dda3937_01592
so part of: sequence
location: 299906..301675
location: region:299906-301675:1
so has part: feature:299906-301675:1:exon
subclass of: SO_0000010

9731668
type: Gene
SIO_000068: ncbigene

position:299906:1
position: 299906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301675:1
position: 301675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299906-301675:1:exon

DDA3937_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01350
old locus tag: Dda3937_01592
function: 8.1.2 extrachromosomal; prophage genes and phage related functions; Replication
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016160663.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primase-like DNA-binding domain-containing protein
translation: MKTAPNVKRLPRDKGTEAVIFAGSNAWDAAKRYQAGNNNGDDIPPIVLDHAQLNDLANLNIVDKGRKYARVYQAGLVDQAKMSLIAKKLAAAGVTEAKLYSETGELLEDWKGYFERLTTEPPETSAGMVLTDLSRMGASQRGEVLRAHYGGALAVHGDSDTVHHYNSVVWVPVADKELQREMAQIFIDADIAYSQNAIKSAVETMKLSLPVMGVTARNLIGFSNGVFDTRSGQFRCHIKEDWLLIASELPFSAPAEGETLATHAPSFWKWLSRSVGNNKRKADRVLAALFMVLANRYDWQLFLEVTGPGGSGKSVFAEICTMLAGKANTVSASMKALEDPRDRALVVGYSLIIMPDMTRYAGDGAGIKAITGGDKVSIDPKHKAPYSTRIPAVVLAVNNNAMTFSDRSGGISRRRVIFNFSEVVPENERDPMLAEKIEGELAVIIRHLLTRFAKQDEAKRLLHEQQKSEEAMAIKREGDSLVDFCGYLMASVLCDGMFIGNAEIVPFSPRRYLYHAYLAYMRANGLNKPVSLTRFGTDMPGAMAEYGKEYQKRKTKLGLRSNVTLNEDSEDWMPQCDAPQGSQNKEEKK
SIO_010081: DDA3937_RS01350
subclass of: SO_0000673
so part of: DDA3937_RS01350
location: 299906..301675
location: region:299906-301675:1
so has part: feature:299906-301675:1:exon

WP_013315972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299906-301675:1:exon

DDA3937_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01355
so part of: sequence
location: 302076..302255
location: region:302076-302255:1
so has part: feature:302076-302255:1:exon
subclass of: SO_0000010

23677383
type: Gene
SIO_000068: ncbigene

position:302076:1
position: 302076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302255:1
position: 302255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302076-302255:1:exon

DDA3937_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001114742.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSKKKAMAVHIDAETMKKIEEYQAFVKENHPEMPVPTIGQIVRSGVNYWHRHTLGAWL
SIO_010081: DDA3937_RS01355
subclass of: SO_0000673
so part of: DDA3937_RS01355
location: 302076..302255
location: region:302076-302255:1
so has part: feature:302076-302255:1:exon

WP_033111532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302076-302255:1:exon

DDA3937_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01360
old locus tag: Dda3937_01593
so part of: sequence
location: 302252..304177
location: region:302252-304177:1
so has part: feature:302252-304177:1:exon
subclass of: SO_0000010

9731669
type: Gene
SIO_000068: ncbigene

position:302252:1
position: 302252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304177:1
position: 304177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302252-304177:1:exon

DDA3937_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01360
old locus tag: Dda3937_01593
EC number: 3.4.21.92
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014883662.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Clp protease ClpP
translation: MKCWYTIKAASDSASATILIYEEIGAWGITAQKFSEDLKALGDISHITLNIHSPGGDVFDGIAIYNLLSKHPAKITVHIDGLAASMASVIAMAGDRIVMPENALMMIHKPWGISGGNANDMRDYAELLDKVEHVLIPAYARKTGKSAEELAAMLEEETWMDGRECVAQGFADELLPAVSAMARIESKRIEDFEHMPDNIKGMITQPKGSTGATVPEKDRINGIKDMFAMFGGKHDSLKIQCLEDVGCTPDMAKERLMKELGRGATPSGKFIPENSAHIYVDNGNITGDGIRNGLFARLGYAPAERGNPYAMMSLFDMAKASLADRGVGISGFGNRSQIVNLAFTHSSSDFSHILAAGAEKSVLTGWQNSGETFQQWTKTGSLSNFHEAKRVGINGFSQLDKVPEGAEYKYVTTGDSGVPIALATYGNIFSVTRQAIINDDLSQLTTIPQAMGRAAARTVGNLVYLLLTTNTAFTDGKALFHADHGNLIAKSLDMDGLNEARKAMRLQEDANGDPINIIPAFILVPAALEGAANRAVLSSSSLFPVDGSGTQNQNPGIINVVKDMAQIVVDPRLDKANNKQWYVASAQGTDTIEVAYLDGVDTPYLEQQEGFTVDGIAWKVRIDAGVAALDYRGLVKSNGTA
SIO_010081: DDA3937_RS01360
subclass of: SO_0000673
so part of: DDA3937_RS01360
location: 302252..304177
location: region:302252-304177:1
so has part: feature:302252-304177:1:exon

WP_033111533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302252-304177:1:exon

DDA3937_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01365
old locus tag: Dda3937_01594
so part of: sequence
location: 304407..307235
location: region:304407-307235:1
so has part: feature:304407-307235:1:exon
subclass of: SO_0000010

9731670
type: Gene
SIO_000068: ncbigene

position:304407:1
position: 304407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307235:1
position: 307235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304407-307235:1:exon

DDA3937_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01365
old locus tag: Dda3937_01594
inference: COORDINATES: protein motif:HMM:TIGR01541.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail tape measure protein
translation: MTQQVGNLIVNLEADSASFTEQVERAKKQLGTFGDSANSAAQTTADMAARQEAALKSLLEQIDPNVKAINRLDVQYAQLVSHLDAGRIDAGQFERFNGMLSQSRQQILKMTAAANDLPAALSKQELAAQKAGISIGQYRMAMRSLPAQMTDVVTQLAGGQNPFLIMIQQGGQVKDMFGGFRPMFTGLASAISPTFLAIGATAGAVTALGIAAYKGQQYLSDFNKSLVLTGGQSGQTANSLLFNAEAIANSGRSFGGAAESLNALVKAGANLGVNYKDVAASIASLSKTAGASVDDLAGTFGKITMDPEKGLAAMAEKYGNVTLRQLDYIKSLQDSGKYTEALSYANKIASDGFQEMARSVQDNMGYLERAAASVGGAFSSMWDKMLDVGKSKSLQAQLADATEQFYNLDKSLKASSAQGQQRMGLEQAREQARQLVAQLTDQLHAEQRKGDEQQRQATLQKSALTNQQHFQALADAGLTKEQQRTDEYLRLNRYIEERKKLNQALSQEEIAQIKKGIEERYKDPKQREYKAPAGDTEQEKALAELTALESQLRVLQQHSSLNDTISQQRKDLWLTESKFAVLDDASQNRKLTKQEQSLLANKDQIVALAQQKALLGDEIVAQERLNKLNDTALKYATQMSEKGAALTAGSTISDRLAQQQRAMAQLRIGWQNAGGQLSDAGYQKELEAAQAYYAKEDALRNDWLAGAKRGWAEFEDSATNVYSSVQESATSALNGLSDSLTSLVTTGSANIKQFGTSMLKMIASVINKLIVTYALQQALGWISASASASTSTATASASANSSFSGGAYSNLGFADGGYANLGGFTGIGNKHEPAGIVHRGEFVFTKEATRRIGVGNLYNMMHGFADGGFAGGVAPNTPLASGGGLQITNNVTIQNDGSVSSSTSGNDQVSKATLRLLDDFCQKNIVKALTPGGSIWNAMKSR
SIO_010081: DDA3937_RS01365
subclass of: SO_0000673
so part of: DDA3937_RS01365
location: 304407..307235
location: region:304407-307235:1
so has part: feature:304407-307235:1:exon

WP_052303353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304407-307235:1:exon

DDA3937_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: fis
locus tag: DDA3937_RS01370
old locus tag: Dda3937_01595
so part of: sequence
location: complement(307385..307681)
location: region:307385-307681:-1
so has part: feature:307385-307681:-1:exon
subclass of: SO_0000010

9731671
type: Gene
SIO_000068: ncbigene

position:307385:-1
position: 307385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307681:-1
position: 307681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307385-307681:-1:exon

DDA3937_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: fis
locus tag: DDA3937_RS01370
old locus tag: Dda3937_01595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding transcriptional regulator Fis
translation: MFEQRVNSDVLTVSTVNSQAQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
SIO_010081: DDA3937_RS01370
subclass of: SO_0000673
so part of: DDA3937_RS01370
location: complement(307385..307681)
location: region:307385-307681:-1
so has part: feature:307385-307681:-1:exon

WP_012883002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307385-307681:-1:exon

DDA3937_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: dusB
locus tag: DDA3937_RS01375
old locus tag: Dda3937_01596
so part of: sequence
location: complement(307705..308670)
location: region:307705-308670:-1
so has part: feature:307705-308670:-1:exon
subclass of: SO_0000010

9731672
type: Gene
SIO_000068: ncbigene

position:307705:-1
position: 307705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308670:-1
position: 308670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307705-308670:-1:exon

DDA3937_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: dusB
locus tag: DDA3937_RS01375
old locus tag: Dda3937_01596
EC number: 1.3.1.-
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA dihydrouridine synthase DusB
translation: MRIGQFQLPNRLIAAPMAGVSDRPFRALCYAMGAGMTVSEMLSSNPEVWRSDKSRLRMVHSDEPGIRAVQIAGGDPDEMAAAARINAENGAQVIDINMGCPAKKVNRKMAGSALLQYPELVKQILIAVVKAVDVPVTLKIRTGWAPEHRNCAEIAKLAEDCGIQALTVHGRTRACLFNGEAEYDSIRTVKQSVSIPIIANGDITDPRKARAVLDYTGADALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLIGHIRELHDFYGPGKGFRIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALKAYFENLA
SIO_010081: DDA3937_RS01375
subclass of: SO_0000673
so part of: DDA3937_RS01375
location: complement(307705..308670)
location: region:307705-308670:-1
so has part: feature:307705-308670:-1:exon

WP_013315975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307705-308670:-1:exon

DDA3937_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: prmA
locus tag: DDA3937_RS01380
old locus tag: Dda3937_01597
so part of: sequence
location: complement(309023..309910)
location: region:309023-309910:-1
so has part: feature:309023-309910:-1:exon
subclass of: SO_0000010

9731673
type: Gene
SIO_000068: ncbigene

position:309023:-1
position: 309023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309910:-1
position: 309910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309023-309910:-1:exon

DDA3937_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: prmA
locus tag: DDA3937_RS01380
old locus tag: Dda3937_01597
function: 2.2.3 information transfer; RNA related; RNA modification
function: 6.6 cell structure; ribosome
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943129.1
GO function: GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L11 methyltransferase
translation: MPWIQLKINTSGAHAEQLGDALSESGAVSVTFQDTHDTPVFEPLPGETRLWGDTDVIGLYDAETDMAEVIAMLEQEPLLGVGFRHKIEQLEDKDWEREWMENFHPMQFGKRLWICPSWREVPDPSAVNVMLDPGLAFGTGTHPTTSLCLQWLDGLDLDGKTVIDFGCGSGILAIAALKLGAAHAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPKDLSADVVVANILAGPLRELAPLIGVLPKNGGHLGLSGILASQAQSVAEAYEDRFQLDPVAEKEEWCRITGIRKPV
SIO_010081: DDA3937_RS01380
subclass of: SO_0000673
so part of: DDA3937_RS01380
location: complement(309023..309910)
location: region:309023-309910:-1
so has part: feature:309023-309910:-1:exon

WP_013315976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309023-309910:-1:exon

DDA3937_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: panF
locus tag: DDA3937_RS01385
old locus tag: Dda3937_01598
so part of: sequence
location: complement(309925..311376)
location: region:309925-311376:-1
so has part: feature:309925-311376:-1:exon
subclass of: SO_0000010

9731674
type: Gene
SIO_000068: ncbigene

position:309925:-1
position: 309925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311376:-1
position: 311376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309925-311376:-1:exon

DDA3937_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: panF
locus tag: DDA3937_RS01385
old locus tag: Dda3937_01598
function: 4.2.A.21 transport; Electrochemical potential driven transporters; Porters (Uni-, Sym- and Antiporters); The Solute:Sodium Symporter (SSS) Family
function: 1.5.3.5 metabolism; building block biosynthesis; cofactor, small molecule carrier; Coenzyme A
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 4.S.138 transport; substrate; Na+/pantothenate
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943128.1
GO function: GO:0015498 - pantothenate:sodium symporter activity [Evidence IEA]
GO process: GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015887 - pantothenate transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium/pantothenate symporter
translation: MQSDVILPLIAYLLLVFGLSVYAWRRRQQGNFLTEYFIGNRSMGGFVLAMTLIGTYVSASSFIGGPGAAYKYGLGWVLLSMIQVPTMLLSLSILGKKFAILARRYNAITLNDMLYARYGSRLLVWFASLSLLVAFIGAMAVQFIGGARLLETVAHVPYNVGLLIFGITIALYTAFGGFRASVLNDALQGIVMLIGTLLLLAGVIYAAGGLPAAVGKLAQINPALVDPHGSNQILSAPFMASFWVLVCFGVIGLPNTAVRCISYRDSKALHRGILIGTLVISVLMLGMHLAGALGRAILPNLTIPDQVLPELMLTVLPPLAAGIFLAAPTAAIMSNINAHLLQASATIVKDLYLSVYPQKISNERYIRHLSSFTTLLLGLLVLLASWRPPEMIIWLNLLAFGGLEAVFLWPLVLGLYWERANAAGALCSMFSGAVSYTLLASFNVQLAGFHPIVPSLLLSLVAFILGNRFGRQPAPAVVASSSL
SIO_010081: DDA3937_RS01385
subclass of: SO_0000673
so part of: DDA3937_RS01385
location: complement(309925..311376)
location: region:309925-311376:-1
so has part: feature:309925-311376:-1:exon

WP_013315977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309925-311376:-1:exon

DDA3937_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01390
old locus tag: Dda3937_01599
so part of: sequence
location: complement(311366..311608)
location: region:311366-311608:-1
so has part: feature:311366-311608:-1:exon
subclass of: SO_0000010

9731675
type: Gene
SIO_000068: ncbigene

position:311366:-1
position: 311366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311608:-1
position: 311608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311366-311608:-1:exon

DDA3937_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01390
old locus tag: Dda3937_01599
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883006.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YhdT family protein
translation: MDKRFIQAHREARWSLILTLAYLVAWTLFAYLPDNRPGLTGLPHWFELACLALPLLFIGLCWLMVRVVFRDVSLEDHDAE
SIO_010081: DDA3937_RS01390
subclass of: SO_0000673
so part of: DDA3937_RS01390
location: complement(311366..311608)
location: region:311366-311608:-1
so has part: feature:311366-311608:-1:exon

WP_013315978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311366-311608:-1:exon

DDA3937_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: accC
locus tag: DDA3937_RS01395
old locus tag: Dda3937_01600
so part of: sequence
location: complement(311802..313145)
location: region:311802-313145:-1
so has part: feature:311802-313145:-1:exon
subclass of: SO_0000010

9731676
type: Gene
SIO_000068: ncbigene

position:311802:-1
position: 311802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313145:-1
position: 313145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311802-313145:-1:exon

DDA3937_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: accC
locus tag: DDA3937_RS01395
old locus tag: Dda3937_01600
EC number: 6.3.4.14
function: 1.5.4 metabolism; building block biosynthesis; fatty acid and phosphatidic acid
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855338.1
GO component: GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO function: GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase biotin carboxylase subunit
translation: MLDKIVIANRGEIALRILRACKELGIKTVAVHSTADRDLKHVLLADETVCIGPAPSPKSYLNIPAIISAAEITGAVAIHPGYGFLSENADFAEQVERSGFIFIGPRADTIRLMGDKVSAISAMKKAGVPCVPGSDGPLGDDMDKNRAIGKRIGYPVIIKASGGGGGRGMRVVRSEKELEQSIAMTRAEAKAAFNNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITADLRRYIGERCAKACVDINYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVKVRGHAVECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPHYDSMIGKLITYGESRDIAISRMKNALAELIIDGIKTNVELQMRIMSDENFQHGGTNIHYLEKKLGLQ
SIO_010081: DDA3937_RS01395
subclass of: SO_0000673
so part of: DDA3937_RS01395
location: complement(311802..313145)
location: region:311802-313145:-1
so has part: feature:311802-313145:-1:exon

WP_013315979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311802-313145:-1:exon

DDA3937_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: accB
locus tag: DDA3937_RS01400
old locus tag: Dda3937_04028
so part of: sequence
location: complement(313157..313582)
location: region:313157-313582:-1
so has part: feature:313157-313582:-1:exon
subclass of: SO_0000010

9731677
type: Gene
SIO_000068: ncbigene

position:313157:-1
position: 313157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313582:-1
position: 313582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313157-313582:-1:exon

DDA3937_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: accB
locus tag: DDA3937_RS01400
old locus tag: Dda3937_04028
EC number: 6.4.1.2
function: 1.6.15.3 metabolism; macromolecules (cellular constituent) biosynthesis; large molecule carriers; biotin carboxyl carrier protein
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091896.1
GO component: GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO function: GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase biotin carboxyl carrier protein
translation: MDIRKIKKLIELVEESGIAELEISEGEESVRISRAPAPGSYPIMQQAYAPMPQFAPAAAPAAISGHVVRSPMVGTFYRTPSPDAKAFVEVGQQVKVGDTLCIVEAMKMMNQIEADKAGVVKAILVESGQPVEFDEPLVVIE
SIO_010081: DDA3937_RS01400
subclass of: SO_0000673
so part of: DDA3937_RS01400
location: complement(313157..313582)
location: region:313157-313582:-1
so has part: feature:313157-313582:-1:exon

WP_013315980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313157-313582:-1:exon

DDA3937_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: aroQ
locus tag: DDA3937_RS01405
old locus tag: Dda3937_04029
so part of: sequence
location: complement(313618..314070)
location: region:313618-314070:-1
so has part: feature:313618-314070:-1:exon
subclass of: SO_0000010

9731678
type: Gene
SIO_000068: ncbigene

position:313618:-1
position: 313618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314070:-1
position: 314070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313618-314070:-1:exon

DDA3937_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: aroQ
locus tag: DDA3937_RS01405
old locus tag: Dda3937_04029
EC number: 4.2.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210071.1
GO function: GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II 3-dehydroquinate dehydratase
translation: MADKFHILLLNGPNLNLLGTREPDKYGHTTLAEIVSRLEQDAAALNVQLSHLQSNAEHELIDRIHQARGNTDFILINPAAFTHTSVALRDALLAVAIPFIEIHLTNVYAREPFRHHSYLSDVSAGVICGLGADGYHYGLQTAVKRLSTSN
SIO_010081: DDA3937_RS01405
subclass of: SO_0000673
so part of: DDA3937_RS01405
location: complement(313618..314070)
location: region:313618-314070:-1
so has part: feature:313618-314070:-1:exon

WP_029456545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313618-314070:-1:exon

DDA3937_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: msrQ
locus tag: DDA3937_RS01410
old locus tag: Dda3937_04030
so part of: sequence
location: complement(314309..314908)
location: region:314309-314908:-1
so has part: feature:314309-314908:-1:exon
subclass of: SO_0000010

9731679
type: Gene
SIO_000068: ncbigene

position:314309:-1
position: 314309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314908:-1
position: 314908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314309-314908:-1:exon

DDA3937_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: msrQ
locus tag: DDA3937_RS01410
old locus tag: Dda3937_04030
function: 6.1 cell structure; membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001241496.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein-methionine-sulfoxide reductase heme-binding subunit MsrQ
translation: MRLTARHITALKVVLHLAAFLPLAWLVLAVNQGAFSADPAKDIQHFTGRMALKLLLATLMVTPLARYGKQPLLIRCRRLLGLWCFAWASLHLLSYTLLELGVNHLDLLGKEIFLRPYLTLGMASWLILLALTLTSTQSAQRKLGARWQKLHNLIYLVAILAPVHYLWSVKSLSPLPIIYASFAVILLLFRYKKLRQWRR
SIO_010081: DDA3937_RS01410
subclass of: SO_0000673
so part of: DDA3937_RS01410
location: complement(314309..314908)
location: region:314309-314908:-1
so has part: feature:314309-314908:-1:exon

WP_013315982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314309-314908:-1:exon

DDA3937_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: msrP
locus tag: DDA3937_RS01415
old locus tag: Dda3937_04444
so part of: sequence
location: complement(314975..315976)
location: region:314975-315976:-1
so has part: feature:314975-315976:-1:exon
subclass of: SO_0000010

9731680
type: Gene
SIO_000068: ncbigene

position:314975:-1
position: 314975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315976:-1
position: 315976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314975-315976:-1:exon

DDA3937_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: msrP
locus tag: DDA3937_RS01415
old locus tag: Dda3937_04444
EC number: 1.8.5.-
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315983.1
GO function: GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016667 - oxidoreductase activity, acting on a sulfur group of donors [Evidence IEA]
GO process: GO:0030091 - protein repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein-methionine-sulfoxide reductase catalytic subunit MsrP
translation: MSRHRKLTDADVTPESLFHQRRTVLKALGLTAATLSLSSGARADLLNWFQGKQAPVAPPGKPLAFSQPPQWRPELALTPEDKVTGYNNFYEFGLDKADPAANAGGLKTEGWKVRIDGEVAKPITLDIDDIRRRFALEERIYRFRCVEAWSMVIPWVGFELSQLIKLAEPTSDARYVAFQTLYDPAQMPGQKDSFVGGGLDYPYVEGLRMDEAMHPLTLLAVGVYGKTLPPQNGAPIRLVTPWKYGFKNIKSIVHIRLTRQPPPSTWNLSAPNEYGFYANVNPNVDHPRWSQASERVIGAGGLLNVQRQPTLMFNGYADQVAALYQGLDLRANF
SIO_010081: DDA3937_RS01415
subclass of: SO_0000673
so part of: DDA3937_RS01415
location: complement(314975..315976)
location: region:314975-315976:-1
so has part: feature:314975-315976:-1:exon

WP_013315983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314975-315976:-1:exon

DDA3937_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01420
old locus tag: Dda3937_00660
so part of: sequence
location: complement(316196..317182)
location: region:316196-317182:-1
so has part: feature:316196-317182:-1:exon
subclass of: SO_0000010

9731681
type: Gene
SIO_000068: ncbigene

position:316196:-1
position: 316196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317182:-1
position: 317182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316196-317182:-1:exon

DDA3937_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01420
old locus tag: Dda3937_00660
EC number: 1.-.-.-
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848141.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MDR family oxidoreductase
translation: MRALVLRQQNGLTLADVNTLEPSQLPDGDVTVDVDWSGINYKDALAITGKGKIIRQFPMVPGIDFAGTVRHSDHPDFKAGQPVVLTGWGVGENHWGGLAEQARVRADWLVPLPQGLTPRQAMIIGTAGFTAMLCVMALEEGGVTPASGEIVVSGASGGVGSTAVALLHALGYQVTAISGRADNSAYLQQLGAHQVLDRKEFAVAGRPLEKQRWAGAIDTVGDQVLATLLTQMHYGATVAACGLAGGVSLPATVMPFILRNVRLQGVDSVMTPRARREEAWRRLAALLPAAFYEQVTQEITLEQVPTTAAALLENRVTGRTLVRVGTAD
SIO_010081: DDA3937_RS01420
subclass of: SO_0000673
so part of: DDA3937_RS01420
location: complement(316196..317182)
location: region:316196-317182:-1
so has part: feature:316196-317182:-1:exon

WP_013315984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316196-317182:-1:exon

DDA3937_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: csrD
locus tag: DDA3937_RS01425
old locus tag: Dda3937_00661
so part of: sequence
location: 317346..319292
location: region:317346-319292:1
so has part: feature:317346-319292:1:exon
subclass of: SO_0000010

9731682
type: Gene
SIO_000068: ncbigene

position:317346:1
position: 317346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319292:1
position: 319292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317346-319292:1:exon

DDA3937_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: csrD
locus tag: DDA3937_RS01425
old locus tag: Dda3937_00661
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843551.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNase E specificity factor CsrD
translation: MGLTVRISILMTMLTTLAVVLMLVSSIFSFVCYSQQRMEHQLRAVAASIDQALLVQPPDSIQFWLPAVMKAAGIVELEIRDGHESLYLLRLPEMLSDGADRALLYRHTRLSLLHHTDVKVNVTYVDPLFGTPRYLKSTLSIVLVILVIAVTVFHGVRWLRRQMAGQEQLERRARRILAGERDTVMHGSVHEWPATASGALDQLLLDLAEAREARSRVDTLIRSFAAQDAQTGLNNRLFFENQLATQLEDPEDVGTHGVVMMIRLPDFDTLQETHGYGGVLEEYRNTLINLLSTFVLRYPAALLARYYHSDFTVLLPHRTLKEADSIASQLVKAIDILPVTPLIDREDILHIGISAYHGGQTTEQVMESVEDATRNAVLQGGNGWCVYDRRVPEKGRGSVKWRTLLEHTLLRGGPRLYQKPAITRDGEVHHREMFSRIYDGTQELLEAEYMPLVRQLGLTSGYDRQLINRVIALTVSWQDSVLAFPITVDSLLQRPFLRWLRETLLQCPKRQRERLLFELAEADVCQYIGRLRPILAMITGLGCRLAVTQAGLTLVSTAYIKSLQVEVIKLHPGLVRSLDKRPENQLFVSSLTEACKGTHAQVFAAGVRTREEWQTLLDKGVCGGQGDLFAASEPVSNTLKKYSPRTYV
SIO_010081: DDA3937_RS01425
subclass of: SO_0000673
so part of: DDA3937_RS01425
location: 317346..319292
location: region:317346-319292:1
so has part: feature:317346-319292:1:exon

WP_013315985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317346-319292:1:exon

DDA3937_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: mreB
locus tag: DDA3937_RS01430
old locus tag: Dda3937_00662
so part of: sequence
location: 319607..320650
location: region:319607-320650:1
so has part: feature:319607-320650:1:exon
subclass of: SO_0000010

9731684
type: Gene
SIO_000068: ncbigene

position:319607:1
position: 319607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320650:1
position: 320650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319607-320650:1:exon

DDA3937_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: mreB
locus tag: DDA3937_RS01430
old locus tag: Dda3937_00662
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreB
translation: MFKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHEAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRNLAEGVPRGFNLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE
SIO_010081: DDA3937_RS01430
subclass of: SO_0000673
so part of: DDA3937_RS01430
location: 319607..320650
location: region:319607-320650:1
so has part: feature:319607-320650:1:exon

WP_012883014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319607-320650:1:exon

DDA3937_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: mreC
locus tag: DDA3937_RS01435
old locus tag: Dda3937_00663
so part of: sequence
location: 320754..321890
location: region:320754-321890:1
so has part: feature:320754-321890:1:exon
subclass of: SO_0000010

9731685
type: Gene
SIO_000068: ncbigene

position:320754:1
position: 320754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321890:1
position: 321890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320754-321890:1:exon

DDA3937_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: mreC
locus tag: DDA3937_RS01435
old locus tag: Dda3937_00663
function: 1.6.7 metabolism; macromolecules (cellular constituent) biosynthesis; peptidoglycan (murein)
function: 6.2 cell structure; peptidoglycan (murein)
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848139.1
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreC
translation: MKPIFSRGPSLQLRLFLAVIIAIVIIFADSRLGTFVKIRTYMDTAVSPFYFLANGPRAMLDNLSANLTSREQLERENTALRQELLLKNSDLLLLGQFRQENARLRELLGSPLRQEEQKMVTQVLSSGSDPYSDQVVIDKGNVNGVYEGQPVISDKGVVGQVVAVGQFTSRVLLICDASHALPIQVLRNDIRVIAAGNGCTEDLQLEHLPNNTDIRVGDVLVTSGLGGRFPEGYPVAVVSSVKVDTQRAYTVIQARPTAELQRLRYLLLMWGVDSNSRTALPPDDVHRVANERLMQMMPHVLPSPEEMGPPAPANTQAPDFVGPPAPPAKTTPVKTNSAAPSKPANATSPRNATTPAANPAAPSQQRATPAPGASGGSR
SIO_010081: DDA3937_RS01435
subclass of: SO_0000673
so part of: DDA3937_RS01435
location: 320754..321890
location: region:320754-321890:1
so has part: feature:320754-321890:1:exon

WP_013315987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320754-321890:1:exon

DDA3937_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: mreD
locus tag: DDA3937_RS01440
old locus tag: Dda3937_00664
so part of: sequence
location: 321887..322375
location: region:321887-322375:1
so has part: feature:321887-322375:1:exon
subclass of: SO_0000010

9731686
type: Gene
SIO_000068: ncbigene

position:321887:1
position: 321887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322375:1
position: 322375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321887-322375:1:exon

DDA3937_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: mreD
locus tag: DDA3937_RS01440
old locus tag: Dda3937_00664
function: 1.6.7 metabolism; macromolecules (cellular constituent) biosynthesis; peptidoglycan (murein)
function: 6.1 cell structure; membrane
function: 6.2 cell structure; peptidoglycan (murein)
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210077.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreD
translation: MNSYRRHGHWIIWLSFLVAMVLQIMPWPDDLYMYRPSWLTLILIYWVMALPHRVNVGTGFVLGMITDLILGSTLGVRALGLSIIAYLVAFKFQLFRNMALWQQALIVMLLSLVLDLLVFWAEFLVINVSLRPEIFWNSVVDGVLWPWLFLLMRKIRRQFAVQ
SIO_010081: DDA3937_RS01440
subclass of: SO_0000673
so part of: DDA3937_RS01440
location: 321887..322375
location: region:321887-322375:1
so has part: feature:321887-322375:1:exon

WP_013315988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321887-322375:1:exon

DDA3937_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01445
old locus tag: Dda3937_00665
so part of: sequence
location: 322400..322993
location: region:322400-322993:1
so has part: feature:322400-322993:1:exon
subclass of: SO_0000010

9731687
type: Gene
SIO_000068: ncbigene

position:322400:1
position: 322400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322993:1
position: 322993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322400-322993:1:exon

DDA3937_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01445
old locus tag: Dda3937_00665
EC number: 3.6.1.-
function: 7.1 location of gene products; cytoplasm
function: 5.1 cell processes; cell division
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883017.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside triphosphate pyrophosphatase
translation: MTDLYLASASPRRRELLTLLELSFDILKIDVAEQRQPDETPEQYVSRLARDKAAAGVAVAPEDLPVLGADTIVVLNGQVLEKPRDEDDAARILRALSGQRHQVMTALALADRRESVSARVVTEVQFRTLSDDEITRYIASGEPMDKAGAYGIQGKGGCFVKSIFGSYHAVVGLPLVETLELFTHFSARRKARGTHDR
SIO_010081: DDA3937_RS01445
subclass of: SO_0000673
so part of: DDA3937_RS01445
location: 322400..322993
location: region:322400-322993:1
so has part: feature:322400-322993:1:exon

WP_013315989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322400-322993:1:exon

DDA3937_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rng
locus tag: DDA3937_RS01450
old locus tag: Dda3937_00666
so part of: sequence
location: 322983..324452
location: region:322983-324452:1
so has part: feature:322983-324452:1:exon
subclass of: SO_0000010

9731688
type: Gene
SIO_000068: ncbigene

position:322983:1
position: 322983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324452:1
position: 324452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322983-324452:1:exon

DDA3937_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rng
locus tag: DDA3937_RS01450
old locus tag: Dda3937_00666
EC number: 3.1.26.-
function: 2.2.3 information transfer; RNA related; RNA modification
function: 5.1 cell processes; cell division
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1
GO function: GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease G
translation: MTAELLVNITPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESEAERERLKKTVADYCDEQGGFIIRTAAEGVGEEELSQDAAFLKRLWTKVMERKKRNQTKCKLYGELALAHRILRDFAGASLDRIRVDSKLTYDSLLEFTAEYIPEMTSKLEHYSGKQPIFDLYDVENEIQRALDRKVELKSGGYLIIDQTEAMTTIDINTGAFVGHRNLDETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMGNEEHRRRVLHSLEQALSKDRVKTGISGFSQLGLVEMTRKRTRESIEHVLCSECPTCHGRGSVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVGDALKSDESHALAEVEIFVGKQVKVQIEPLYSQEQFDVVMM
SIO_010081: DDA3937_RS01450
subclass of: SO_0000673
so part of: DDA3937_RS01450
location: 322983..324452
location: region:322983-324452:1
so has part: feature:322983-324452:1:exon

WP_013315990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322983-324452:1:exon

DDA3937_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: yhdP
locus tag: DDA3937_RS01455
old locus tag: Dda3937_00667
so part of: sequence
location: 324563..328399
location: region:324563-328399:1
so has part: feature:324563-328399:1:exon
subclass of: SO_0000010

9731689
type: Gene
SIO_000068: ncbigene

position:324563:1
position: 324563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328399:1
position: 328399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324563-328399:1:exon

DDA3937_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: yhdP
locus tag: DDA3937_RS01455
old locus tag: Dda3937_00667
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855326.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AsmA2 domain-containing protein YhdP
translation: MKRLPGIAAATGAILIVLAALLVSGLRMVLPTLDTFRPQVVAWAQSVTGLPMEVESLSGSWETFGPTLDITNLRIHHPDAEWQSERISVALDVWQSLLHLKWKFRDLTFYHLQVDIKTPIDPDRQRSRTWEPDQLGSLFLRQFDHFDLRNSRIRFLTPAGTQAELQIPQLTWLNGKNRHRAEGQISLSSFNGQHGVVQLRMDLRDEQGWLNNGVVYLQADNIDMKPWLGRWIRNNTGLESANFSLAAWLQVREGDMYGGDLLLSQGDASWRDGDTLHRLGINGMTLHASRYQNGWQLDVPALNLSTDGVDWPKGQLSALWLPADTQLLGPDRLAELRIRGRHLALERLGPLLPLLSTATPELKTRWQALQPQGQLTALALDIPLQQPEQTRFQANWQDVGWKNWQLLPGANHVSGEAAGSLARGRVRVNLAQSTLPYQDMFRAPLDIRQADATLDWRSDSQGWELWGQGLDVRSRSLWANGDFRYRHPAQGEPRLDILAGIRLGDAADAWRYYPEPFMGKDLVNYLTGAIKSGQVDNATLVFAGNPAQFPFEHQEGQFQVWVPLEKSRFEFQPGWPALDNLNISLNFLNNGLWMSAPHVMLGDAEGRNVNAVIPDYSKETLLIDGDISGSGKEVSDYFDQTPLKISLGGALTQIQIGGEVQGNLHLDIPLNGGLVKASGDVALNNNHLFIKPLDVSLQSVSGAFHYDNGNLSSQTLQGRWLEQPLTFNFSTQEQEKAFLVNVGLQGNWAASRLPELPKPVAAALNGNANWQSTVQVTLPHQGPSSYDVTVQGDLKEVSSHLPSPLNKAGGAALGLQVSAKGDERGFSLTGSLGKSQSFNSQWLLKDNKVMLTRAAWQEGAKPPPLPDDSSLTLALPPLDGERWLALLPGVRNAVSAQAGASRFQWPDRVTLTTPELKILGQQWHDLMFTSRSQNGGSEITAAGREIDGRLLIPTSGLWRGDVRYLYYNPQWQGDDATNPAALAEKKSPLNDPSIRFEDWPALQFDCRECWLMGQNVGQVKGTLQPEPNKLVLANGLVDNGKAKLTLDGSWQESGEGTRTAIKGQLSGGSLSDNADWLGLATPLRAGAFKIDYDLYWHGSPWAPHIPSLSGILKTDIGKGEIVNVGTGQAGQLLRLVSFDALLRKLQFDFSDTFGKGFYFDSVRSTAWIKDGVLHTDNLLVDGLEADIAMKGDIDLVKRELSMEAVVAPEISATVGVATAFAVNPVIGAAVFAASKVLAPLWSKISLIRYHISGSVDQPKIQEVVREPQKAKAAEAAGQ
SIO_010081: DDA3937_RS01455
subclass of: SO_0000673
so part of: DDA3937_RS01455
location: 324563..328399
location: region:324563-328399:1
so has part: feature:324563-328399:1:exon

WP_033112187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324563-328399:1:exon

DDA3937_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: tldD
locus tag: DDA3937_RS01460
old locus tag: Dda3937_00668
so part of: sequence
location: 328446..329891
location: region:328446-329891:1
so has part: feature:328446-329891:1:exon
subclass of: SO_0000010

9731690
type: Gene
SIO_000068: ncbigene

position:328446:1
position: 328446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329891:1
position: 329891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328446-329891:1:exon

DDA3937_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: tldD
locus tag: DDA3937_RS01460
old locus tag: Dda3937_00668
EC number: 3.4.24.-
function: 3.1.4 regulation; type of regulation; regulation level unknown
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1
GO function: GO:0008237 - metallopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloprotease TldD
translation: MSLTFVSEQLLTANKLSHQDLQSVLGTLSERRIDYADLYFQSSYHESWVLEDRIIKDGSYHIDQGVGIRAINGEKTGFAYADQITLNALQQSAQAARSIVREQGNGAVKTLGEVPHRGLYPQANPLDSLTREEKIALLQRVDATARAADARVQEVTASLTGVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGRRERGSSGGGARTGYDYFWQQADGEVRAEAWAKEAVRMALVNLSAVAAPAGSMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGKLVASELCTVVDDGTLEGRRGSLAVDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAGKSTPEEIIASVDYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGRVTKPVKGATLIGSGIEAMQQISMVGNDLALDRGVGVCGKEGQSLPVGVGQPTLKLDNITVGGTA
SIO_010081: DDA3937_RS01460
subclass of: SO_0000673
so part of: DDA3937_RS01460
location: 328446..329891
location: region:328446-329891:1
so has part: feature:328446-329891:1:exon

WP_013315992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328446-329891:1:exon

DDA3937_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: aaeR
locus tag: DDA3937_RS01465
old locus tag: Dda3937_00669
so part of: sequence
location: complement(329980..330924)
location: region:329980-330924:-1
so has part: feature:329980-330924:-1:exon
subclass of: SO_0000010

9731691
type: Gene
SIO_000068: ncbigene

position:329980:-1
position: 329980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330924:-1
position: 330924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329980-330924:-1:exon

DDA3937_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: aaeR
locus tag: DDA3937_RS01465
old locus tag: Dda3937_00669
function: In enterohemorrhagic E. coli, QseA controls the Ler regulator that regulates other genes within the locus of enterocyte effacement (LEE)
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.3 regulation; type of regulation; transcriptional level; repressor
function: 3.1.2.2 regulation; type of regulation; transcriptional level; activator
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883021.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH-type transcriptional activator AaeR
translation: MERLKSMSVFARVVEFGSFTAAARQLQMSVSAVSQTVTRLEDELQVKLLNRSTRSIGLTEAGRIYYHGCRRMLHEAQEVHEQLYAFNNTPIGTLRIGSSSTMAQNVLANMTTDMLKEYPGLSVNLVCGIPAPDLIADGLDIVIRVGALQDSSLYSTRLGSMPMVVCAARSYLTQHGSPEKPADVSNISWLEYSVRPDSEFELIAPEGITTRLTPQGRFVTNDPVTLIRWLKNGAGIAYVPLMWVFEEIKRGEIEILFPRYHSDPRPVYALYTRRDNLPLKVQVCINYLTEYFNKVALIYQGYRQEHSQAEPPQK
SIO_010081: DDA3937_RS01465
subclass of: SO_0000673
so part of: DDA3937_RS01465
location: complement(329980..330924)
location: region:329980-330924:-1
so has part: feature:329980-330924:-1:exon

WP_013315993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329980-330924:-1:exon

DDA3937_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: aaeX
locus tag: DDA3937_RS01470
old locus tag: Dda3937_00670
so part of: sequence
location: 331263..331466
location: region:331263-331466:1
so has part: feature:331263-331466:1:exon
subclass of: SO_0000010

9731692
type: Gene
SIO_000068: ncbigene

position:331263:1
position: 331263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331466:1
position: 331466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331263-331466:1:exon

DDA3937_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: aaeX
locus tag: DDA3937_RS01470
old locus tag: Dda3937_00670
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012772985.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: p-hydroxybenzoic acid efflux pump operon protein AaeX
translation: MNSLPVMVLFGLSFPPVFFVLLITLALFFICIRLLHPTGIYDRVWHPALFNTALFVCLFYLLFRFGL
SIO_010081: DDA3937_RS01470
subclass of: SO_0000673
so part of: DDA3937_RS01470
location: 331263..331466
location: region:331263-331466:1
so has part: feature:331263-331466:1:exon

WP_013315994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331263-331466:1:exon

DDA3937_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: aaeA
locus tag: DDA3937_RS01475
old locus tag: Dda3937_00671
so part of: sequence
location: 331498..332421
location: region:331498-332421:1
so has part: feature:331498-332421:1:exon
subclass of: SO_0000010

9731693
type: Gene
SIO_000068: ncbigene

position:331498:1
position: 331498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332421:1
position: 332421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331498-332421:1:exon

DDA3937_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: aaeA
locus tag: DDA3937_RS01475
old locus tag: Dda3937_00671
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005975428.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: p-hydroxybenzoic acid efflux pump subunit AaeA
translation: MIKKFSRMAITLLLVLLAAVALVRVWSFYTESPWTRDARFSADVVAIAPDVSGLLTDVNVQDNQPVKQGDVLFVIDQPRYQQALEQAQADVAYYQALADEKKRESARRQRLGVQAMSREEIEQSGNALQTTLHQLAKAQAELELAKLDLARTVVRAPADGWITNLHVHAGEYITRGATAVALVKKDSFYLLAYMEETKLAGVRPGYRVEITPLGSNQILFGAVDSIAAGVTNSSSSADTKGLATVDSNLEWVRLAQRVPVKIRLEQQWGDLYPAGTTATVVVTGEHTRNTKPMSPLLQLLHRLREFG
SIO_010081: DDA3937_RS01475
subclass of: SO_0000673
so part of: DDA3937_RS01475
location: 331498..332421
location: region:331498-332421:1
so has part: feature:331498-332421:1:exon

WP_081441322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331498-332421:1:exon

DDA3937_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: aaeB
locus tag: DDA3937_RS01480
old locus tag: Dda3937_00672
so part of: sequence
location: 332435..334384
location: region:332435-334384:1
so has part: feature:332435-334384:1:exon
subclass of: SO_0000010

9731694
type: Gene
SIO_000068: ncbigene

position:332435:1
position: 332435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334384:1
position: 334384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332435-334384:1:exon

DDA3937_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: aaeB
locus tag: DDA3937_RS01480
old locus tag: Dda3937_00672
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855321.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: p-hydroxybenzoic acid efflux pump subunit AaeB
translation: MNSPAFLRLRFAFKLSTAIVLSLVLGFHLQLETPRWATLTAAIVAAGPAFAAGGDPFSGAIRHRGMLRVIGTFIGCIGALVIIIATVRAPVVMLMLCCLWAGVCVWISSLVKVENAYVFALAGYTALIIIVTSQSAPLRIPQFAVERCSEIVLGIVCAILADLLFSPRSIKQDIDRAVNELLVGQYQLLQRCVNGMTKEELDAAWNGLVRKTHAINGMRSVLMMESSRWQGANRRIKTLLTQSWIMITQACETRLTLQDHPDAVKGAIAMMLEQPADTPAEMRRRLRQLRHLAAAHSRSLPPTLVSWLAAAARYQLLAKGVRTNVRISQSEAALLDADVPVKASSAETHHAMINGVRTGIATALGCLFWLLTGWTSGSVCMVMIAVVTSLAMRLPNPLMAAKDFLVGTLVALPLGAVLFMMVLPSTQQSLLLLCLSLGGVAFVIGIEVQKRRLGSLGALASTINILVLDNPMTFNLAQFLDNAIGQIIGCFLALIVILLIRDNTRDRTGRTLLNRFVFGAVSALSTRPARRRENHLPALYQHLFLLLNLFPGEIGKYRLALSLIMMHQRLRTLELPVSPSLSAFHRQMRATAEQVIDATRDRSHHFSRLLAQMDEYQHLLRDHQVSDDAIDAVGRLTALLHRHKHALGD
SIO_010081: DDA3937_RS01480
subclass of: SO_0000673
so part of: DDA3937_RS01480
location: 332435..334384
location: region:332435-334384:1
so has part: feature:332435-334384:1:exon

WP_033112188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332435-334384:1:exon

DDA3937_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01485
old locus tag: Dda3937_00673
so part of: sequence
location: complement(334391..334891)
location: region:334391-334891:-1
so has part: feature:334391-334891:-1:exon
subclass of: SO_0000010

9731695
type: Gene
SIO_000068: ncbigene

position:334391:-1
position: 334391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334891:-1
position: 334891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334391-334891:-1:exon

DDA3937_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01485
old locus tag: Dda3937_00673
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883025.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1543 domain-containing protein
translation: MTTLFMYYVGGRAQGANIELHDVQFAAVEHPQDGFPLLKANWFGDKSQVHVDSYTPCHWADGYDITLSRQPFQGREKLWFINMGGYLPHDPAEVHQFGLFVATDAEQAKQRAKAVLLTEVFQQHKDDLRDVDDCLPLTLLDRWHIHLTANPTGRVMPPQWQGYHPL
SIO_010081: DDA3937_RS01485
subclass of: SO_0000673
so part of: DDA3937_RS01485
location: complement(334391..334891)
location: region:334391-334891:-1
so has part: feature:334391-334891:-1:exon

WP_033111535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334391-334891:-1:exon

DDA3937_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01490
old locus tag: Dda3937_00674
so part of: sequence
location: 335008..335634
location: region:335008-335634:1
so has part: feature:335008-335634:1:exon
subclass of: SO_0000010

9731696
type: Gene
SIO_000068: ncbigene

position:335008:1
position: 335008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335634:1
position: 335634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335008-335634:1:exon

DDA3937_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01490
old locus tag: Dda3937_00674
function: 4.2.A.76 transport; Electrochemical potential driven transporters; Porters (Uni-, Sym- and Antiporters); The Resistance to homoserine/Threonine (RhtB) Family
function: 4.S.12 transport; substrate; amino acid
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943111.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0006865 - amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysE family transporter
translation: MTLHLWLVYVGVITALIAVPGPSALLSMTHGLRYGQRRALATVLGGATGSLVLMTASALGLGAILAASATAFLVLKVVGAAYLIWLGISAWRTRESTLTPSVEVEAIAPGLLKLYHRGFMVGVSNPKDILFFAALFPNFIDTGAPQAMQFALLALTWVVLDCSIMFSYACMGNRVSALFAHPRRLRLFNRATGTLFIFAGSALVASTK
SIO_010081: DDA3937_RS01490
subclass of: SO_0000673
so part of: DDA3937_RS01490
location: 335008..335634
location: region:335008-335634:1
so has part: feature:335008-335634:1:exon

WP_013315998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335008-335634:1:exon

DDA3937_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01495
old locus tag: Dda3937_00675
so part of: sequence
location: complement(336038..336586)
location: region:336038-336586:-1
so has part: feature:336038-336586:-1:exon
subclass of: SO_0000010

9731697
type: Gene
SIO_000068: ncbigene

position:336038:-1
position: 336038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336586:-1
position: 336586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336038-336586:-1:exon

DDA3937_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01495
old locus tag: Dda3937_00675
function: 0.1 unknown function; conserved hypothetical product
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013814696.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis factor YjgA
translation: MNKHPEDWQDDVPDASQDDDDEEIIWVSKSEIKRDAEALKALGTELVELGKNALERIPLDEDLRAAIELAQRITKEGRRRQLQLIGKMLRARDPEPIQTALDKLRNRHNQQVSLFHKLEQLRDRLIAEGDGAVPDILALYPQADRQQLRSLVRNAQKEKAANKPPKSARLIFQYLRELAEAE
SIO_010081: DDA3937_RS01495
subclass of: SO_0000673
so part of: DDA3937_RS01495
location: complement(336038..336586)
location: region:336038-336586:-1
so has part: feature:336038-336586:-1:exon

WP_013315999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336038-336586:-1:exon

DDA3937_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: pmbA
locus tag: DDA3937_RS01500
old locus tag: Dda3937_00676
so part of: sequence
location: 336777..338117
location: region:336777-338117:1
so has part: feature:336777-338117:1:exon
subclass of: SO_0000010

9731698
type: Gene
SIO_000068: ncbigene

position:336777:1
position: 336777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338117:1
position: 338117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336777-338117:1:exon

DDA3937_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: pmbA
locus tag: DDA3937_RS01500
old locus tag: Dda3937_00676
EC number: 3.4.24.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883028.1
GO function: GO:0008237 - metallopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloprotease PmbA
translation: MTIITQVAEQRKVLEQAVSQALELARAGSDAAEVAVTKTTGISVSSRYGEVENVEFNSDGALGITVYYQQRKGSASSTDMSPDAIARTVQAALDIARYTSVDPCSGPADKDLLAFEAPDLDLFHPAELDADRGIELAAAAEQAALKADKRITNTEGGSFNSHYGIKVFGNSHGMLQSYCSSRHSMSVSVIAEHNGDMERDYAYTIGRALGDLDSPAWVGEECARRTLARLSPRKLATMEAPVMFSSEVATGLFGHLVGAISGGSVYRKSTFLLDSLGKQILPEWLTIQELPHLRKGLASTPFDSEGVRTEQRDIVKEGVLQTWLLTTYAGRKLGMKSTGHAGGIHNWRIAGRGLDFDGMLKEMGTGLLVTSLMGQGVSAVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMLRNMVTIGDDIETRSNIQCGSVLLPSMKIAGV
SIO_010081: DDA3937_RS01500
subclass of: SO_0000673
so part of: DDA3937_RS01500
location: 336777..338117
location: region:336777-338117:1
so has part: feature:336777-338117:1:exon

WP_033111536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336777-338117:1:exon

DDA3937_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rnk
locus tag: DDA3937_RS01505
old locus tag: Dda3937_00677
so part of: sequence
location: complement(338184..338594)
location: region:338184-338594:-1
so has part: feature:338184-338594:-1:exon
subclass of: SO_0000010

9731699
type: Gene
SIO_000068: ncbigene

position:338184:-1
position: 338184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338594:-1
position: 338594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338184-338594:-1:exon

DDA3937_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rnk
locus tag: DDA3937_RS01505
old locus tag: Dda3937_00677
function: 1.7.33 metabolism; central intermediary metabolism; nucleotide and nucleoside conversions
function: 3.1.4 regulation; type of regulation; regulation level unknown
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210103.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO process: GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside diphosphate kinase regulator
translation: MDKPHLTISELDAERLDALLEQPAFADTEVAQALSEELDRADIVQPVEIPGDVVTMNSRVRFRDLLTTEEHIRTLVYPAGLKDSREQISVMAPLGAALLGMHVGNSIAWPLPNGEETRIEVMELLYQPEAAGEYHR
SIO_010081: DDA3937_RS01505
subclass of: SO_0000673
so part of: DDA3937_RS01505
location: complement(338184..338594)
location: region:338184-338594:-1
so has part: feature:338184-338594:-1:exon

WP_013316001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338184-338594:-1:exon

DDA3937_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: npr
locus tag: DDA3937_RS01510
old locus tag: Dda3937_00678
so part of: sequence
location: complement(338775..339047)
location: region:338775-339047:-1
so has part: feature:338775-339047:-1:exon
subclass of: SO_0000010

9731700
type: Gene
SIO_000068: ncbigene

position:338775:-1
position: 338775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339047:-1
position: 339047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338775-339047:-1:exon

DDA3937_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: npr
locus tag: DDA3937_RS01510
old locus tag: Dda3937_00678
function: 2.3.3 information transfer; protein related; posttranslational modification
function: 7.1 location of gene products; cytoplasm
function: 4.8.A.8 transport; Group Translocators; Accessory Factors Involved in Transport; The Phosphotransferase System HPr (HPr) Family
function: 4.S.173 transport; substrate; sugar
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312112.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS phosphocarrier protein NPr
translation: MTVRQTVEVKNRLGMHARPAMKLFELVQSFDSAVLLRNESGTEADASSVIAMLMLDSAKGRHIEVEVTGSDEEQALAAVIQLFEAGFDED
SIO_010081: DDA3937_RS01510
subclass of: SO_0000673
so part of: DDA3937_RS01510
location: complement(338775..339047)
location: region:338775-339047:-1
so has part: feature:338775-339047:-1:exon

WP_013316002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338775-339047:-1:exon

DDA3937_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rapZ
locus tag: DDA3937_RS01515
old locus tag: Dda3937_00679
so part of: sequence
location: complement(339044..339898)
location: region:339044-339898:-1
so has part: feature:339044-339898:-1:exon
subclass of: SO_0000010

9731701
type: Gene
SIO_000068: ncbigene

position:339044:-1
position: 339044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339898:-1
position: 339898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339044-339898:-1:exon

DDA3937_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rapZ
locus tag: DDA3937_RS01515
old locus tag: Dda3937_00679
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229054.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNase adapter RapZ
translation: MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPELAHTLAERNISAAVSIDVRNLPETPEVLEHALTRLPQSFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEENDLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGYKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLEKRKS
SIO_010081: DDA3937_RS01515
subclass of: SO_0000673
so part of: DDA3937_RS01515
location: complement(339044..339898)
location: region:339044-339898:-1
so has part: feature:339044-339898:-1:exon

WP_013316003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339044-339898:-1:exon

DDA3937_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ptsN
locus tag: DDA3937_RS01520
old locus tag: Dda3937_00680
so part of: sequence
location: complement(340047..340535)
location: region:340047-340535:-1
so has part: feature:340047-340535:-1:exon
subclass of: SO_0000010

9731702
type: Gene
SIO_000068: ncbigene

position:340047:-1
position: 340047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340535:-1
position: 340535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340047-340535:-1:exon

DDA3937_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ptsN
locus tag: DDA3937_RS01520
old locus tag: Dda3937_00680
function: 4.S.173 transport; substrate; sugar
function: 4.4.A.2 transport; Group Translocators; Phosphotransferase Systems (PEP-dependent PTS); The PTS Fructose-Mannitol (Fru) Family
function: 7.1 location of gene products; cytoplasm
function: 1.1.4 metabolism; carbon utilization; amines
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883032.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS IIA-like nitrogen regulatory protein PtsN
translation: MNNEPVMQLSAVLRKECTRSAVHCQSKKRALEIISELAARQLNLPPQMVFEAILTRERMGSTGIGNGIAIPHGKLEDENTLGAVGVFIQLEQPIAFDAIDNQPVDLLFALLVPTEQCKTHLHTLSLVAKRLADKTVCKRLRAAQSDDELYQIMTEADLSDQP
SIO_010081: DDA3937_RS01520
subclass of: SO_0000673
so part of: DDA3937_RS01520
location: complement(340047..340535)
location: region:340047-340535:-1
so has part: feature:340047-340535:-1:exon

WP_013316004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340047-340535:-1:exon

DDA3937_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: hpf
locus tag: DDA3937_RS01525
old locus tag: Dda3937_00681
so part of: sequence
location: complement(340629..340916)
location: region:340629-340916:-1
so has part: feature:340629-340916:-1:exon
subclass of: SO_0000010

9731703
type: Gene
SIO_000068: ncbigene

position:340629:-1
position: 340629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340916:-1
position: 340916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340629-340916:-1:exon

DDA3937_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: hpf
locus tag: DDA3937_RS01525
old locus tag: Dda3937_00681
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.1 regulation; type of regulation; transcriptional level; sigma factors, anti-sigmafactors
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312109.1
GO process: GO:0044238 - primary metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome hibernation promoting factor
translation: MQLNITGHHVEITDALREFVNLKFAKLEQYFDRINQVYVVLKVEKILHIADATIHVNGGELHATSEADDMYAAIDLLIDKLARQLNKHKDKLKQH
SIO_010081: DDA3937_RS01525
subclass of: SO_0000673
so part of: DDA3937_RS01525
location: complement(340629..340916)
location: region:340629-340916:-1
so has part: feature:340629-340916:-1:exon

WP_013316005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340629-340916:-1:exon

DDA3937_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rpoN
locus tag: DDA3937_RS01530
old locus tag: Dda3937_00682
so part of: sequence
location: complement(340941..342374)
location: region:340941-342374:-1
so has part: feature:340941-342374:-1:exon
subclass of: SO_0000010

9731704
type: Gene
SIO_000068: ncbigene

position:340941:-1
position: 340941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342374:-1
position: 342374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340941-342374:-1:exon

DDA3937_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rpoN
locus tag: DDA3937_RS01530
old locus tag: Dda3937_00682
EC number: 2.7.7.6
function: 1.8.3 metabolism; metabolism of other compounds; nitrogen metabolism
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.1 regulation; type of regulation; transcriptional level; sigma factors, anti-sigmafactors
function: 3.3.3 regulation; genetic unit regulated; stimulon
function: 8.1 extrachromosomal; prophage genes and phage related functions
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229051.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase factor sigma-54
translation: MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQADIHDEVETQESSDSETLDTREALEQKDMPDELPLDAAWDEIYTAGTPSGTSTDYRDEELPVYQGETTQTLQDYLMWQVELTPFSDTDSAIATSIVDAVDNTGYLTVSLDDIRDSIGNDDVTLEEVEAVLKRVQRFDPVGVAARDLRECLLVQLSQFDNGIPRLAEARLIVSEYLDLLANHDFRTLIRTSRLKEEVLKEALALIQSLDPRPGQSINTGESEYVIPDVLVRKIQGHWAVELNTDSVPRLQINQQYAALGSSARNDSDGQFIRSHLQEARWLIKSLESRNDTLLKVTRCIVEQQQAFFEHGEEFMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDNGGEASSTAIRALVRKLIAAENPAKPLSDSKLTSLLSEQGIIVARRTVAKYRESLSIPPSNQRKQLV
SIO_010081: DDA3937_RS01530
subclass of: SO_0000673
so part of: DDA3937_RS01530
location: complement(340941..342374)
location: region:340941-342374:-1
so has part: feature:340941-342374:-1:exon

WP_013316006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340941-342374:-1:exon

DDA3937_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: lptB
locus tag: DDA3937_RS01535
old locus tag: Dda3937_00683
so part of: sequence
location: complement(342422..343147)
location: region:342422-343147:-1
so has part: feature:342422-343147:-1:exon
subclass of: SO_0000010

9731705
type: Gene
SIO_000068: ncbigene

position:342422:-1
position: 342422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343147:-1
position: 343147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342422-343147:-1:exon

DDA3937_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: lptB
locus tag: DDA3937_RS01535
old locus tag: Dda3937_00683
EC number: 7.5.2.5
function: 4.3.A.1.a transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP binding cytoplasmic component
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229050.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS export ABC transporter ATP-binding protein
translation: MATLIAENLAKAYKGRKVVENVSLNVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDEGRIVIDDEDISLLPLHDRARRGIGYLPQEASIFRRLSVYDNLMAVLEIRKDLTREQQQDRAHELMEEFHIVHLRDSLGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKKIIEHLRDSGLGVLITDHNVRETLDVCERAYIVSQGQLIAHGSPMDILANEQVKRVYLGEGFRL
SIO_010081: DDA3937_RS01535
subclass of: SO_0000673
so part of: DDA3937_RS01535
location: complement(342422..343147)
location: region:342422-343147:-1
so has part: feature:342422-343147:-1:exon

WP_013316007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342422-343147:-1:exon

DDA3937_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: lptA
locus tag: DDA3937_RS01540
old locus tag: Dda3937_00684
so part of: sequence
location: complement(343163..343741)
location: region:343163-343741:-1
so has part: feature:343163-343741:-1:exon
subclass of: SO_0000010

9731706
type: Gene
SIO_000068: ncbigene

position:343163:-1
position: 343163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343741:-1
position: 343741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343163-343741:-1:exon

DDA3937_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: lptA
locus tag: DDA3937_RS01540
old locus tag: Dda3937_00684
EC number: 7.5.2.5
function: 0.1 unknown function; conserved hypothetical product
function: 7.2 location of gene products; periplasmic space
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013316008.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipopolysaccharide ABC transporter substrate-binding protein LptA
translation: MKSNQKINVLHSILIASSLFAVSVPALALTGDTDQPIHITSDQQALDMQGNVVTFTGNVIVTQGSIKAQADKVVVTRPNGQQGHEVIEGYGNPATFYQMQDNGKPVKGHSQKMRYEMDKQLVILTGDAYLEQLDSNVKGDRITYLVQQQQMEAFSDKGKRVTTVLVPTQLQDKGTQNGAKPSGNTGKPTKQQ
SIO_010081: DDA3937_RS01540
subclass of: SO_0000673
so part of: DDA3937_RS01540
location: complement(343163..343741)
location: region:343163-343741:-1
so has part: feature:343163-343741:-1:exon

WP_013316008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343163-343741:-1:exon

DDA3937_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: lptC
locus tag: DDA3937_RS01545
old locus tag: Dda3937_00685
so part of: sequence
location: complement(343719..344288)
location: region:343719-344288:-1
so has part: feature:343719-344288:-1:exon
subclass of: SO_0000010

9731707
type: Gene
SIO_000068: ncbigene

position:343719:-1
position: 343719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344288:-1
position: 344288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343719-344288:-1:exon

DDA3937_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: lptC
locus tag: DDA3937_RS01545
old locus tag: Dda3937_00685
EC number: 7.5.2.5
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883037.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS export ABC transporter periplasmic protein LptC
translation: MSKTKRWLTLLLALIALVLIGLNLTNQRAGNGPTEVQNNDPAYTMQQNITVVYDPTGKLSYKLVAEKAEHYNADQVSWFTQPVATMFNEQTVATWSVRADRAKLTKDRMLYLYGHVEVNSLTNDSQLERIKTDNAQINLVTQDVTSDDEVTLYGVNFTSNGLKMRGNLRSKTAELIDKVKSYYEIQPKN
SIO_010081: DDA3937_RS01545
subclass of: SO_0000673
so part of: DDA3937_RS01545
location: complement(343719..344288)
location: region:343719-344288:-1
so has part: feature:343719-344288:-1:exon

WP_013316009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343719-344288:-1:exon

DDA3937_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: kdsC
locus tag: DDA3937_RS01550
old locus tag: Dda3937_00686
so part of: sequence
location: complement(344285..344851)
location: region:344285-344851:-1
so has part: feature:344285-344851:-1:exon
subclass of: SO_0000010

9731708
type: Gene
SIO_000068: ncbigene

position:344285:-1
position: 344285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344851:-1
position: 344851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344285-344851:-1:exon

DDA3937_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: kdsC
locus tag: DDA3937_RS01550
old locus tag: Dda3937_00686
EC number: 3.1.3.45
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883038.1
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-manno-octulosonate-8-phosphatase KdsC
translation: MSEIRPQTDTCYGPVDTQVMQRARDIRLLICDVDGVLSDGLIYMGNQGEELKAFNVRDGYGIRCLLTSDVDVAIITGRSSQLLVDRCQTLGIRHLYQGQSDKLLAFRELLDTLSLTASQVAYIGDDLIDWPVMAETGLSVAVADAHPLLLPNAHYVTRIAGGRGAVREICDLILLAQGKLDFAKGLSI
SIO_010081: DDA3937_RS01550
subclass of: SO_0000673
so part of: DDA3937_RS01550
location: complement(344285..344851)
location: region:344285-344851:-1
so has part: feature:344285-344851:-1:exon

WP_013316010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344285-344851:-1:exon

DDA3937_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: kdsD
locus tag: DDA3937_RS01555
old locus tag: Dda3937_00687
so part of: sequence
location: complement(344901..345887)
location: region:344901-345887:-1
so has part: feature:344901-345887:-1:exon
subclass of: SO_0000010

9731709
type: Gene
SIO_000068: ncbigene

position:344901:-1
position: 344901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345887:-1
position: 345887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344901-345887:-1:exon

DDA3937_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: kdsD
locus tag: DDA3937_RS01555
old locus tag: Dda3937_00687
EC number: 5.3.1.13
function: 3.1.4 regulation; type of regulation; regulation level unknown
function: 6.7 cell structure; capsule (M and K antigens)
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210119.1
GO function: GO:0097367 - carbohydrate derivative binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]
GO process: GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arabinose-5-phosphate isomerase KdsD
translation: MSHFELQPGFDFQTAGRQVLSIERDSLAQLDQYIDDNFSRACEKMFYCHGKVVVMGMGKSGHIGCKMAATFASTGTPAFFVHPGEASHGDLGMITAQDIVIAISNSGESHEILALIPVLKRLQVCLICMTGNPESTMAKAADIHLCVHVSQEACPLGLAPTSSTTATLVMGDALAVALLQARGFTAEDFALSHPGGALGRKLLLRINDIMHTGDEIPRVGRDASLRDALLEITRKNLGMTVICGPDDRIEGIFTDGDLRRVFDMNIDLNSAGIADVMTRGGIRVTPQTLAVDALNLMQSRHITSLLVAEDDRLRGIVHMHDMLRAGVV
SIO_010081: DDA3937_RS01555
subclass of: SO_0000673
so part of: DDA3937_RS01555
location: complement(344901..345887)
location: region:344901-345887:-1
so has part: feature:344901-345887:-1:exon

WP_013316011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344901-345887:-1:exon

DDA3937_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01560
old locus tag: Dda3937_00688
so part of: sequence
location: complement(345918..346880)
location: region:345918-346880:-1
so has part: feature:345918-346880:-1:exon
subclass of: SO_0000010

9731710
type: Gene
SIO_000068: ncbigene

position:345918:-1
position: 345918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346880:-1
position: 346880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345918-346880:-1:exon

DDA3937_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01560
old locus tag: Dda3937_00688
function: 7.3 location of gene products; inner membrane
function: 4.2.A.19 transport; Electrochemical potential driven transporters; Porters (Uni-, Sym- and Antiporters); The Ca2+:Cation Antiporter (CaCA) Family
function: 6.1 cell structure; membrane
function: 4.S.133 transport; substrate; Na+/Ca+
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843568.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: calcium/sodium antiporter
translation: MLFATVLLIVGLVLLVYGADRLVYGAAVLARTFGVPPMIIGMTIVGMGTSLPELMVSVTAALNHQTDMAVGNVLGSNIANILLILGSAVLIRPLTFHSPLLRQELPPMLVVTLLCGVLLHDSFLSRLDGVILLLTAGGCIVLMLRMARAAQNRGDDSLTREQMAELPRENNQTVALLWLLIGLIILPMSARIVIDNATVIANYFNISELTIGLTVLAVGTSLPELATAIVGTLKKEDDIALGNLIGSNIFNIVIVLGVPALLSPGAVNPLAFARDYWVMLGVSALLTVLCLRQKRRIGQGAGALLLCAFIAYLSMLFLFS
SIO_010081: DDA3937_RS01560
subclass of: SO_0000673
so part of: DDA3937_RS01560
location: complement(345918..346880)
location: region:345918-346880:-1
so has part: feature:345918-346880:-1:exon

WP_013316012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345918-346880:-1:exon

DDA3937_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: mlaF
locus tag: DDA3937_RS01565
old locus tag: Dda3937_00689
so part of: sequence
location: 347162..347971
location: region:347162-347971:1
so has part: feature:347162-347971:1:exon
subclass of: SO_0000010

9731711
type: Gene
SIO_000068: ncbigene

position:347162:1
position: 347162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347971:1
position: 347971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347162-347971:1:exon

DDA3937_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: mlaF
locus tag: DDA3937_RS01565
old locus tag: Dda3937_00689
function: 4.3.A.1.a transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP binding cytoplasmic component
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013316013.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipid ABC transporter ATP-binding protein MlaF
translation: MNHENLVEIRGLSFRRGNRPIFSDVSLNVPKQKITAIMGPSGIGKTTLLRLIGGQLQPDSGEIWFDGENIPTLSRSRLYETRKKMSMLFQSGALFTDLNVFDNVAWPLREHTQLPEPLLHSTVMMKLEAVGLRGAAELMPSELSGGMARRAALARAIALDPQLIMFDEPFVGQDPITMGVLVKLIDELNHALGVTCIVVSHDVPEVLSIADYAYIIADQRVVAEGSPAELQQNGDPRVRQFLDGIADGPVPFRYPAGDYQRGLLGLGSK
SIO_010081: DDA3937_RS01565
subclass of: SO_0000673
so part of: DDA3937_RS01565
location: 347162..347971
location: region:347162-347971:1
so has part: feature:347162-347971:1:exon

WP_013316013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347162-347971:1:exon

DDA3937_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: mlaE
locus tag: DDA3937_RS01570
old locus tag: Dda3937_00690
so part of: sequence
location: 347975..348757
location: region:347975-348757:1
so has part: feature:347975-348757:1:exon
subclass of: SO_0000010

9731712
type: Gene
SIO_000068: ncbigene

position:347975:1
position: 347975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348757:1
position: 348757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347975-348757:1:exon

DDA3937_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: mlaE
locus tag: DDA3937_RS01570
old locus tag: Dda3937_00690
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883042.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid asymmetry maintenance ABC transporter permease subunit MlaE
translation: MLLQALASLGRVGIQVCAAFGRAGLMLFNALVGKPEPAKQWPLLRKQLYSVGVQSLLIIMVSGVFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKTTEQLSSMEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAVGIWGGALVGVDWKGIDSGFFWSAMQNAVEWRKDLLNCVIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFGK
SIO_010081: DDA3937_RS01570
subclass of: SO_0000673
so part of: DDA3937_RS01570
location: 347975..348757
location: region:347975-348757:1
so has part: feature:347975-348757:1:exon

WP_013316014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347975-348757:1:exon

DDA3937_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: mlaD
locus tag: DDA3937_RS01575
old locus tag: Dda3937_00691
so part of: sequence
location: 348762..349385
location: region:348762-349385:1
so has part: feature:348762-349385:1:exon
subclass of: SO_0000010

9731713
type: Gene
SIO_000068: ncbigene

position:348762:1
position: 348762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349385:1
position: 349385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348762-349385:1:exon

DDA3937_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: mlaD
locus tag: DDA3937_RS01575
old locus tag: Dda3937_00691
function: 4.3.A.1.p transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, periplasmic binding component
function: 7.2 location of gene products; periplasmic space
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848112.1
GO process: GO:0015914 - phospholipid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane lipid asymmetry maintenance protein MlaD
translation: MQTKKHEIWVGVFMLIALCAIVFLCLKVADLKSLGQQQTYRLYATFDNIGGLKARSPVKIGGVVIGRVADISLDTKTYLPRVAIDIDKRYDHIPDTSSLAIRTSGLLGEQYLALNMGFEDEDMGTSILKDGGTIQDTKSAMVLEDLIGQFLYKSGGSNTDNASQNNASHDTVSPNNANPSHAKPVETKPAENSGEAAKPESGAKPAQ
SIO_010081: DDA3937_RS01575
subclass of: SO_0000673
so part of: DDA3937_RS01575
location: 348762..349385
location: region:348762-349385:1
so has part: feature:348762-349385:1:exon

WP_013316015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348762-349385:1:exon

DDA3937_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: mlaC
locus tag: DDA3937_RS01580
old locus tag: Dda3937_00692
so part of: sequence
location: 349403..350056
location: region:349403-350056:1
so has part: feature:349403-350056:1:exon
subclass of: SO_0000010

9731714
type: Gene
SIO_000068: ncbigene

position:349403:1
position: 349403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350056:1
position: 350056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349403-350056:1:exon

DDA3937_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: mlaC
locus tag: DDA3937_RS01580
old locus tag: Dda3937_00692
function: 7.2 location of gene products; periplasmic space
function: 4.3.A.1 transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013316016.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipid-binding protein MlaC
translation: MLKRLLMVALLVVAPLVSAADQTTPQIDQTNPYSLMNEAANKTFNRLKNEQWPIKQDPNYLRTVVRKELLPYVQVKYAGALVLGQYYKNATPDQREAYFKAFEAYLEQAYGQALASYHGQTYEIASEQPVGNAEIVSIRVTITDNGGRPPIRLDFQWRKNTKTGYWQAYDMIAEGVSMITTKQNEWASTLRQSGVDGLTKQLQAAAQQPISLGQKNG
SIO_010081: DDA3937_RS01580
subclass of: SO_0000673
so part of: DDA3937_RS01580
location: 349403..350056
location: region:349403-350056:1
so has part: feature:349403-350056:1:exon

WP_013316016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349403-350056:1:exon

DDA3937_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: mlaB
locus tag: DDA3937_RS01585
old locus tag: Dda3937_00693
so part of: sequence
location: 350049..350351
location: region:350049-350351:1
so has part: feature:350049-350351:1:exon
subclass of: SO_0000010

9731715
type: Gene
SIO_000068: ncbigene

position:350049:1
position: 350049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350351:1
position: 350351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350049-350351:1:exon

DDA3937_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: mlaB
locus tag: DDA3937_RS01585
old locus tag: Dda3937_00693
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855300.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid asymmetry maintenance protein MlaB
translation: MADALRWRQDDGALRLEGDLDRNTLLPLWQQREALLNDSSVLDVGQVARVDSSGLALLVHFYHQQEQRGKPLAIIGASDRLRTLIQLYNLSEIIPVRPAD
SIO_010081: DDA3937_RS01585
subclass of: SO_0000673
so part of: DDA3937_RS01585
location: 350049..350351
location: region:350049-350351:1
so has part: feature:350049-350351:1:exon

WP_013316017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350049-350351:1:exon

DDA3937_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ibaG
locus tag: DDA3937_RS01590
old locus tag: Dda3937_00694
so part of: sequence
location: 350484..350738
location: region:350484-350738:1
so has part: feature:350484-350738:1:exon
subclass of: SO_0000010

9731716
type: Gene
SIO_000068: ncbigene

position:350484:1
position: 350484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350738:1
position: 350738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350484-350738:1:exon

DDA3937_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ibaG
locus tag: DDA3937_RS01590
old locus tag: Dda3937_00694
function: 5.1 cell processes; cell division
function: 3.1.2 regulation; type of regulation; transcriptional level
function: 2.2.2 information transfer; RNA related; transcription related
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848109.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BolA family iron metabolism protein IbaG
translation: MENNEIKDVLMSALALQEVHVSGDGSHFQVIVIGELFKGMSRVKQQQTVYAPLMEYIADNRIHALSIKAYTPEEWQRDRKLSGL
SIO_010081: DDA3937_RS01590
subclass of: SO_0000673
so part of: DDA3937_RS01590
location: 350484..350738
location: region:350484-350738:1
so has part: feature:350484-350738:1:exon

WP_013316018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350484-350738:1:exon

DDA3937_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: murA
locus tag: DDA3937_RS01595
old locus tag: Dda3937_00695
so part of: sequence
location: 350796..352058
location: region:350796-352058:1
so has part: feature:350796-352058:1:exon
subclass of: SO_0000010

9731717
type: Gene
SIO_000068: ncbigene

position:350796:1
position: 350796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352058:1
position: 352058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350796-352058:1:exon

DDA3937_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: murA
locus tag: DDA3937_RS01595
old locus tag: Dda3937_00695
EC number: 2.5.1.7
function: 1.6.7 metabolism; macromolecules (cellular constituent) biosynthesis; peptidoglycan (murein)
function: 6.2 cell structure; peptidoglycan (murein)
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091934.1
GO function: GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
translation: MDKFRVQGPTRLAGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLRDIDTTMKLLSQLGARVERNGSVHVDASTVNVFCAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCAIGARPVDLHINGLEQLGAHITLEEGYVKATVDGRLKGAHIVMDKVSVGATVTIMSAATLAVGKTIIENAAREPEIVDTANFLNTLGAKISGAGSDKIVIEGVERLGGGVYRVLPDRIETGTFLVAAAVSGGKVMCRHTRPDTLDAVLSKLREAGADIEIGEDWISLDMHGRRPKAVNVRTAPHPGFPTDMQAQFSLLNLVAEGTGVITETIFENRFMHIPELIRMGAQAEIESNTVICHGVGHLSGAQVMATDLRASASLVLAGCIAEGTTLVDRIYHIDRGYERIEDKLRALGANIERVSAND
SIO_010081: DDA3937_RS01595
subclass of: SO_0000673
so part of: DDA3937_RS01595
location: 350796..352058
location: region:350796-352058:1
so has part: feature:350796-352058:1:exon

WP_013316019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350796-352058:1:exon

DDA3937_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: degS
locus tag: DDA3937_RS01600
old locus tag: Dda3937_00696
so part of: sequence
location: complement(352117..353178)
location: region:352117-353178:-1
so has part: feature:352117-353178:-1:exon
subclass of: SO_0000010

9731718
type: Gene
SIO_000068: ncbigene

position:352117:-1
position: 352117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353178:-1
position: 353178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352117-353178:-1:exon

DDA3937_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: degS
locus tag: DDA3937_RS01600
old locus tag: Dda3937_00696
EC number: 3.4.21.107
function: 1.2.3 metabolism; macromolecule degradation; proteins/peptides/glycopeptides
function: 2.3.6 information transfer; protein related; turnover, degradation
function: 3.1.3.4 regulation; type of regulation; posttranscriptional; proteases, cleavage of compounds
function: 7.2 location of gene products; periplasmic space
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843572.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane-stress sensor serine endopeptidase DegS
translation: MLTKLLRSALFGVIVAGILLLAIPALRSNQGLLKSGGDNSQETPVSYYQGVRRAAPAVVNVYNQANDPTAKNELNIRTLGSGVIMNNKGYILTNKHVISNAEQIVVTLQDGRIFEALLVGSDSLTDLAVLKIEGANLPEIPINPKRVFHVGDVVMAIGNPYNLGQTVTQGIVSATGRVGLSSSGRQNFLQTDASINRGNSGGALVNTLGELVGINTLSFDKSNDGGTPEGIGFAIPVALATKIMNKLIRDGRVIRGYIGISGAQRERLGNQVTGLERLQGIVVNQVETGGPADKAGIKEGDLLLEVNNKPARSVIETMDQVAEIRPGSVIPVVIFRDNQEIKLDMTIQEYPSD
SIO_010081: DDA3937_RS01600
subclass of: SO_0000673
so part of: DDA3937_RS01600
location: complement(352117..353178)
location: region:352117-353178:-1
so has part: feature:352117-353178:-1:exon

WP_013316020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352117-353178:-1:exon

DDA3937_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: degQ
locus tag: DDA3937_RS01605
old locus tag: Dda3937_00697
so part of: sequence
location: complement(353267..354637)
location: region:353267-354637:-1
so has part: feature:353267-354637:-1:exon
subclass of: SO_0000010

9731719
type: Gene
SIO_000068: ncbigene

position:353267:-1
position: 353267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354637:-1
position: 354637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353267-354637:-1:exon

DDA3937_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: degQ
locus tag: DDA3937_RS01605
old locus tag: Dda3937_00697
EC number: 3.4.21.107
function: 1.2.3 metabolism; macromolecule degradation; proteins/peptides/glycopeptides
function: 7.2 location of gene products; periplasmic space
function: 2.3.6 information transfer; protein related; turnover, degradation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002218066.1
GO function: GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine endoprotease DegQ
translation: MKKTSLLYSALALGIGLSLSSLPPANAALPAVVEGQALPSLAPMLEKVLPAVVSVHVEGTQVQRQRIPEEFKFFFGPNTPSEKQNSRPFEGLGSGVIINAEKGYVLTNNHVVNNADKIQVQLNDGREYDAKLIGRDEQTDIALLQLNDAKNLTEVKMADSDQLRVGDFAVAVGNPFGLGQTATSGIISALGRSGLNLEGLENFIQTDASINRGNSGGALVNLRGELIGINTAILAPSGGNVGIGFAIPSNMAQNLTQQLVEFGEVKRGLLGIKGSEMTSEIAKAFKVDAQRGAFVSEVIPKSAAAKAGIKAGDVLVSLDGKPISSFAELRAKIGTTAPGKTVRIGLLRDGKQQEVAVVLDNSANVTTNADTLSPALQGATLNNGQLKDGSKGVTIDNVAKDSAAAKVGLQKGDIIVGVNRERVENITQLRKILEAKPSVLALNIVRGDESIYLLLR
SIO_010081: DDA3937_RS01605
subclass of: SO_0000673
so part of: DDA3937_RS01605
location: complement(353267..354637)
location: region:353267-354637:-1
so has part: feature:353267-354637:-1:exon

WP_013316021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353267-354637:-1:exon

DDA3937_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: zapG
locus tag: DDA3937_RS01610
old locus tag: Dda3937_04695
pseudo: true
so part of: sequence
location: complement(354874..355278)
location: region:354874-355278:-1
so has part: feature:354874-355278:-1:exon
subclass of: SO_0000010

23677384
type: Gene
SIO_000068: ncbigene

position:354874:-1
position: 354874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355278:-1
position: 355278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354874-355278:-1:exon

DDA3937_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: zapG
locus tag: DDA3937_RS01610
old locus tag: Dda3937_04695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883050.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Z-ring associated protein ZapG
SIO_010081: DDA3937_RS01610
subclass of: SO_0000673
so part of: DDA3937_RS01610
location: complement(354874..355278)
location: region:354874-355278:-1
so has part: feature:354874-355278:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354874-355278:-1:exon

DDA3937_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: zapE
locus tag: DDA3937_RS01615
old locus tag: Dda3937_04446
so part of: sequence
location: 355489..356619
location: region:355489-356619:1
so has part: feature:355489-356619:1:exon
subclass of: SO_0000010

9731721
type: Gene
SIO_000068: ncbigene

position:355489:1
position: 355489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356619:1
position: 356619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355489-356619:1:exon

DDA3937_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: zapE
locus tag: DDA3937_RS01615
old locus tag: Dda3937_04446
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002220218.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein ZapE
translation: MQRTTPLALYQQALAAQTYQPDEVQHQTVVRLNAIHQTLTEQVWAPAESSAPGLMAKWRTWLGQKEKSPSPVQGLYMWGGVGRGKTWLMDLFFHSLPSERKLRLHFHRFMLRVHEELNQLQGQENPLEKVADGFKAQTDILCFDEFFVSDITDAMLLAELLRALFSRGIALVATSNIPPDELYRNGLQRARFLPAIELIKQHCGVLNVDAGIDYRLRTLTQAHLYLTPSNADTDAEMQAMFRCLSGRDFSQPGPVLEINHRPLTTLSAGDGVLAVDFATLCLEARSQNDYIALSRLYHTVLLHHVPVMEVKDENAARRFLALVDEFYERRVKLIMSAQATMFEIYQGEHLKFEYQRCLSRLQEMQSEEYLRQPHLP
SIO_010081: DDA3937_RS01615
subclass of: SO_0000673
so part of: DDA3937_RS01615
location: 355489..356619
location: region:355489-356619:1
so has part: feature:355489-356619:1:exon

WP_013316022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355489-356619:1:exon

DDA3937_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01620
old locus tag: Dda3937_00700
so part of: sequence
location: complement(356675..357562)
location: region:356675-357562:-1
so has part: feature:356675-357562:-1:exon
subclass of: SO_0000010

9731722
type: Gene
SIO_000068: ncbigene

position:356675:-1
position: 356675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357562:-1
position: 357562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356675-357562:-1:exon

DDA3937_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01620
old locus tag: Dda3937_00700
EC number: 3.-.-.-
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010347804.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YghX family hydrolase
translation: MTRLTAKDFQPELLELYDYYAHGKLTKREFLERAARYAAGGLTAMTILSLMSPNYALAQQVEFTDPAIIPEYITYPSPNGHGSVRGYLVRPAKTNSPVPAVVVVHENRGLNPYIEDVARRLAKEGFIALAPDGLSSVGGYPGNDDKGRELQQQIDPTKLMNDFFAAVEFLMKHKDATGKVGITGFCYGGGVANAAAVAYPELAAAVPFYGRQPKPEDVSRIKAPLLLHYAERDDNINAGWPAYESALKAASKTYEAYIYPGTNHGFHNDSTPRYDKAAADLAWNRTLAWFRRYLA
SIO_010081: DDA3937_RS01620
subclass of: SO_0000673
so part of: DDA3937_RS01620
location: complement(356675..357562)
location: region:356675-357562:-1
so has part: feature:356675-357562:-1:exon

WP_013316023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356675-357562:-1:exon

DDA3937_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rplM
locus tag: DDA3937_RS01625
old locus tag: Dda3937_00701
so part of: sequence
location: 358037..358465
location: region:358037-358465:1
so has part: feature:358037-358465:1:exon
subclass of: SO_0000010

9731724
type: Gene
SIO_000068: ncbigene

position:358037:1
position: 358037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358465:1
position: 358465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358037-358465:1:exon

DDA3937_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rplM
locus tag: DDA3937_RS01625
old locus tag: Dda3937_00701
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L13
translation: MKTFTAKPETVKRDWYVVDASGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNAEKVAVTGNKRSDKMYYHHTGHIGGIKEATFEEMIARRPERVIEIAVKGMLPKGPLGRAMYRKLKVYAGNEHNHAAQQPQVLDI
SIO_010081: DDA3937_RS01625
subclass of: SO_0000673
so part of: DDA3937_RS01625
location: 358037..358465
location: region:358037-358465:1
so has part: feature:358037-358465:1:exon

WP_012883052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358037-358465:1:exon

DDA3937_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rpsI
locus tag: DDA3937_RS01630
old locus tag: Dda3937_00702
so part of: sequence
location: 358481..358873
location: region:358481-358873:1
so has part: feature:358481-358873:1:exon
subclass of: SO_0000010

9731725
type: Gene
SIO_000068: ncbigene

position:358481:1
position: 358481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358873:1
position: 358873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358481-358873:1:exon

DDA3937_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rpsI
locus tag: DDA3937_RS01630
old locus tag: Dda3937_00702
function: 2.3.8 information transfer; protein related; ribosomal proteins
function: 2.3.2 information transfer; protein related; translation
function: 6.6 cell structure; ribosome
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S9
translation: MAENQYYGTGRRKSSAARVFIKPGSGNIVINQRTLEQYFGRETARMVVRQPLELVDMVGKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR
SIO_010081: DDA3937_RS01630
subclass of: SO_0000673
so part of: DDA3937_RS01630
location: 358481..358873
location: region:358481-358873:1
so has part: feature:358481-358873:1:exon

WP_013316025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358481-358873:1:exon

DDA3937_RS23775
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23775
old locus tag: Dda3937_00703
so part of: sequence
location: 359171..359797
location: region:359171-359797:1
so has part: feature:359171-359797:1:exon
subclass of: SO_0000010

77100066
type: Gene
SIO_000068: ncbigene

position:359171:1
position: 359171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359797:1
position: 359797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359171-359797:1:exon

DDA3937_RS23775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23775
old locus tag: Dda3937_00703
function: 3.1.2 regulation; type of regulation; transcriptional level
function: 2.2.2 information transfer; RNA related; transcription related
inference: COORDINATES: protein motif:HMM:NF012655.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MQARTLSVDRICVAAAAHFAEHGYDAASLNEIAKAVNIKKASLYSHFASKNALFMTVFDDTLQIETAFAQQCFNDEAPDALPGSHYFSCLAKRYADSVYLRFLLRTGYLAPAALYDQISLGYEKYLEQLQDAFINKLHSGHDTRLLPADDVEQLGQAYLGIVDSLHVKLVYTAEPDLSLRLTAMRRLLSDTLQCAILSSRQSREQHHV
SIO_010081: DDA3937_RS23775
subclass of: SO_0000673
so part of: DDA3937_RS23775
location: 359171..359797
location: region:359171-359797:1
so has part: feature:359171-359797:1:exon

WP_013316026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359171-359797:1:exon

DDA3937_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01640
old locus tag: Dda3937_00704
so part of: sequence
location: 359790..361043
location: region:359790-361043:1
so has part: feature:359790-361043:1:exon
subclass of: SO_0000010

9731727
type: Gene
SIO_000068: ncbigene

position:359790:1
position: 359790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361043:1
position: 361043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359790-361043:1:exon

DDA3937_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01640
old locus tag: Dda3937_00704
function: 0.1 unknown function; conserved hypothetical product
function: 4 transport
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007670792.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multidrug effflux MFS transporter
translation: MSERYEHSAAAMTYSLILLLALLTALDAMAIDMYLPAMPALAMDFGASSGKVQQTLSVFLVGLALGQGICGPLLDRYGRRIPLLAGLVIFIGGSVMAALSSSIEWLMLARFLQALGASAGLVAPRAIVADLYSVAESARIFSLLMQVMMIAPILAPLLGGYLLAHGEWRLVFWVLAGLGGAGLIWGIRTIPESLSEEKRLASRAGNLSPGNIVRAYVRQLGYGVFMAYTLAGGVIFGSLFVYISSSSFVFTQSFGLTPAQFSYIFAANAVSLVIGGQISTTLLRRRVGEQRIMMFGIVIHILAGLVLSVLILSGWIGLWGYLLLLATAIGALGLVFGNLTALTMAYAGRQAGVASALMGMLQYLIAALVGYCASQVLQGPVVLPVVIVLCGVVAMLLCIMASHMAQAAFSTCYDDRE
SIO_010081: DDA3937_RS01640
subclass of: SO_0000673
so part of: DDA3937_RS01640
location: 359790..361043
location: region:359790-361043:1
so has part: feature:359790-361043:1:exon

WP_013316027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359790-361043:1:exon

DDA3937_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: sspA
locus tag: DDA3937_RS01645
old locus tag: Dda3937_00705
so part of: sequence
location: 361274..361915
location: region:361274-361915:1
so has part: feature:361274-361915:1:exon
subclass of: SO_0000010

9731728
type: Gene
SIO_000068: ncbigene

position:361274:1
position: 361274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361915:1
position: 361915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361274-361915:1:exon

DDA3937_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: sspA
locus tag: DDA3937_RS01645
old locus tag: Dda3937_00705
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2 regulation; type of regulation; transcriptional level
function: 3.3.3 regulation; genetic unit regulated; stimulon
function: 5.5.3 cell processes; adaptation to stress; starvation response
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005162411.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006749 - glutathione metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stringent starvation protein SspA
translation: MAVAANKRSVMTLFSGPSDIFSHQVRIVLAEKGVSVEIEQVDMDNLPQDLIDLNPYGSVPTLVDRELTLYESRIIMEYLDERFPHPPLMPVYPVARGNSRLMMHRIEQDWYSLMKTVLNGNTQDAEAARKQLREELLAIAPVFNEAPYFMSEEFSLVDCYLAPLLWRLPLLGIELSGSGAKELKGYMTRVFERDAFLASLTEAEREIRLQSRG
SIO_010081: DDA3937_RS01645
subclass of: SO_0000673
so part of: DDA3937_RS01645
location: 361274..361915
location: region:361274-361915:1
so has part: feature:361274-361915:1:exon

WP_013316028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361274-361915:1:exon

DDA3937_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: sspB
locus tag: DDA3937_RS01650
old locus tag: Dda3937_00706
so part of: sequence
location: 361920..362417
location: region:361920-362417:1
so has part: feature:361920-362417:1:exon
subclass of: SO_0000010

9731729
type: Gene
SIO_000068: ncbigene

position:361920:1
position: 361920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362417:1
position: 362417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361920-362417:1:exon

DDA3937_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: sspB
locus tag: DDA3937_RS01650
old locus tag: Dda3937_00706
function: 5.5.3 cell processes; adaptation to stress; starvation response
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005975505.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ClpXP protease specificity-enhancing factor
translation: MTLSQLSPRRPYLLRAFYDWLLDNQLTPHLVVDVTVPGVQVPMEFARDGQIVLNIAPRAVGNLELADDSVRFNARFGGVPREVFVPMASVMAIYARENGAGTMFEPEPAYEIVEEFGEQPQAEEESKPTLMSVVDNESPSSQDEQPDDEPPQPPRGGRPSLRVVK
SIO_010081: DDA3937_RS01650
subclass of: SO_0000673
so part of: DDA3937_RS01650
location: 361920..362417
location: region:361920-362417:1
so has part: feature:361920-362417:1:exon

WP_013316029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361920-362417:1:exon

DDA3937_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01655
old locus tag: Dda3937_00707
so part of: sequence
location: 362550..362960
location: region:362550-362960:1
so has part: feature:362550-362960:1:exon
subclass of: SO_0000010

9731730
type: Gene
SIO_000068: ncbigene

position:362550:1
position: 362550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362960:1
position: 362960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362550-362960:1:exon

DDA3937_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01655
old locus tag: Dda3937_00707
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883056.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GFA family protein
translation: MKTSQGRCLCGAVTITVPESCTHDVYVCHCGMCRTWGGGPLMAIETQHGVTLEGEEHVGRYRSSDWAERAFCRTCGTHLFYRLFEPEIYSISAGLFPNIPKQLVSQVYIDNKPDYYDFLQQTPTMTEQDIIDLYKK
SIO_010081: DDA3937_RS01655
subclass of: SO_0000673
so part of: DDA3937_RS01655
location: 362550..362960
location: region:362550-362960:1
so has part: feature:362550-362960:1:exon

WP_033111537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362550-362960:1:exon

DDA3937_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01660
old locus tag: Dda3937_00708
so part of: sequence
location: complement(363034..364452)
location: region:363034-364452:-1
so has part: feature:363034-364452:-1:exon
subclass of: SO_0000010

9731731
type: Gene
SIO_000068: ncbigene

position:363034:-1
position: 363034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364452:-1
position: 364452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363034-364452:-1:exon

DDA3937_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01660
old locus tag: Dda3937_00708
function: 1.5.1.1 metabolism; building block biosynthesis; amino acids; glutamate
function: 1.8.3 metabolism; metabolism of other compounds; nitrogen metabolism
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate synthase small subunit
translation: MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSESQSKAQADRCLACGNPYCEWKCPVHNYIPNWLKLANEGRIIEAAELSHQTNSLPEVCGRVCPQDRLCEGSCTLNDEFGAVTIGNIERYINDKAIEMGWRPDVSSVQPTGKRVAIIGAGPAGLACADVLTRSGVKAVVYDRHPEIGGLLTFGIPAFKLEKEVMTKRREIFTEMGIEFQLNTEVGKDIQLSDLLTEYDAVFLGVGTYQSMRGGLENEDAPGVYDALPFLIANTKHLMGFETGEQEPYTSMQGKRVVVLGGGDTAMDCVRTSIRQGATHVTCAYRRDEENMPGSKREVKNAREEGVEFRFNLQPLSIEINGSGKVCGVRMVRTELGAPDANGRRRPEAVEGSEHVLEADAVIMAFGFRPHKMAWLAEHGVDLDTQGRIIAPEQSDSAFQTSNPKIFAGGDAVRGSDLVVTAIAEGRKAADGIMNYLEV
SIO_010081: DDA3937_RS01660
subclass of: SO_0000673
so part of: DDA3937_RS01660
location: complement(363034..364452)
location: region:363034-364452:-1
so has part: feature:363034-364452:-1:exon

WP_013316031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363034-364452:-1:exon

DDA3937_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: gltB
locus tag: DDA3937_RS01665
old locus tag: Dda3937_00709
so part of: sequence
location: complement(364462..368922)
location: region:364462-368922:-1
so has part: feature:364462-368922:-1:exon
subclass of: SO_0000010

9731732
type: Gene
SIO_000068: ncbigene

position:364462:-1
position: 364462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368922:-1
position: 368922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364462-368922:-1:exon

DDA3937_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: gltB
locus tag: DDA3937_RS01665
old locus tag: Dda3937_00709
EC number: 1.4.1.13
function: 1.5.1.1 metabolism; building block biosynthesis; amino acids; glutamate
function: 1.8.3 metabolism; metabolism of other compounds; nitrogen metabolism
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229064.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate synthase large subunit
translation: MLYDASHERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGAILADGKTGDGCGLLLQKPDRFFRLVAEEHGWRLANNYAVGMLFLSRDEEKARATRRIVEEELQNETLSVLGWREVPTNPDVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFMARRRIEKRVQDKDFYVCSLSNLVNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRFSTNTVPRWRLAQPFRYLAHNGEINTITGNRQWARARAYKFKTPLIPDLLDAAPFVDESGSDSMSLDNMLELFLAGGMDIVRAMRLLVPPAWQNNPNMDPELRAFFDFNSMHMEPWDGPAGLVLSDGRYAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVGPGELMVIDTRTGRILHSTETDDDLKSRHPYKEWMEKNVKRLVPFEELPDDQVGSRELDDALLETYQKQFGYSNEELDQVIRVLGENGQEATGSMGDDTPFAVLSSRPRIIYDYFRQQFAQVTNPPIDPLRESHVMSLATCIGREMNVFCEAEGQAHRLSFKSPILLYSDFIQLINQDPEHYRAEKLDITFDPKQRSLQDTVEKLCDEAEYKVRAGAVLLVLTDRGIAQDRLPVPAPMAVGAIQARLVEKSLRCDANIIVETASARDPHHFAVLLGFGATAVYPYLAYETLARLVDNHTIDKPYRNVMQNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHNDVASRCFQGVVSRIGGASFSDFEQDLQNLSKRAWLKRQKLEQGGLLKFVYDGEYHAYNPDVVKTLQTAVHSGDYQDYQQYAKLVNERPASMLRDLLALQPQEGAAIPLEQVEPDTELFKRFDTAAMSIGALSPEAHESLAEAMNSLGGFSNSGEGGEDPARYGTNKVSRIKQVASGRFGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIARLRYSVPGVTLISPPPHHDIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGLDIVKAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRRDHYHGLPERVVNYFTFIARETRELMAELGISRLVDLIGRTDLLVELDGITAKQNKLDLSPMLHTVAPQPGKALYCTEGNPSFDKGLLNKELIAQAQAHVDARQSKTLYFDIRNTDRSVGATLSGVIAAKHGDQGLASDPIKAHFTGTAGQSFGVWNAGGVELTLTGDANDYVGKGMAGGVISVRPPVGSAFRSHEASIIGNTCLYGATGGKLFAAGRAGERFAVRNSGAITVVEGIGDNGCEYMTGGIVCILGRTGVNFGAGMTGGFAYVLDEDGEFRKRVNPELVEVLEVENLAIHEEHLRGLITEHVQHTGSQRGEEILANWPVWASKFALVKPKSSDVKALLGHRSRSAAELRVQAQ
SIO_010081: DDA3937_RS01665
subclass of: SO_0000673
so part of: DDA3937_RS01665
location: complement(364462..368922)
location: region:364462-368922:-1
so has part: feature:364462-368922:-1:exon

WP_013316032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364462-368922:-1:exon

DDA3937_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01670
old locus tag: Dda3937_00711
so part of: sequence
location: 369641..370570
location: region:369641-370570:1
so has part: feature:369641-370570:1:exon
subclass of: SO_0000010

9731734
type: Gene
SIO_000068: ncbigene

position:369641:1
position: 369641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370570:1
position: 370570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369641-370570:1:exon

DDA3937_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01670
old locus tag: Dda3937_00711
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009114726.1
GO function: GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR01212 family radical SAM protein
translation: MQLQKLINMFGGDLQRRYGEKIHKLTLHGGFSCPNRDGTLGRGGCTFCNVASFADEQMQQRSIAEQLAAQAGKVNRARRYLAYFQAYTSTYAEVQVLASMYRQALTQADMVGLCVGTRPDCVPDTVLDLLADYHAQGYEVWLELGLQSAHDRTLRRINRGHDFACYRQTAQRARARGLKVCSHLIVGLPGESEEHCLSTLRQVVEAGVDGIKLHPLHIVTGSVMAKAWGAGRLPELPLARYVSIAGEMIRHTPPEIVYHRISASARRPTLLAPLWCENRWTGMVGVHDYLQQHGAQGSALGLPFHYSTN
SIO_010081: DDA3937_RS01670
subclass of: SO_0000673
so part of: DDA3937_RS01670
location: 369641..370570
location: region:369641-370570:1
so has part: feature:369641-370570:1:exon

WP_013316034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369641-370570:1:exon

DDA3937_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: arcB
locus tag: DDA3937_RS01675
old locus tag: Dda3937_04694
pseudo: true
so part of: sequence
location: 370664..373003
location: region:370664-373003:1
so has part: feature:370664-373003:1:exon
subclass of: SO_0000010

23677385
type: Gene
SIO_000068: ncbigene

position:370664:1
position: 370664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373003:1
position: 373003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370664-373003:1:exon

DDA3937_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: arcB
locus tag: DDA3937_RS01675
old locus tag: Dda3937_04694
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210142.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: aerobic respiration two-component sensor histidine kinase ArcB
SIO_010081: DDA3937_RS01675
subclass of: SO_0000673
so part of: DDA3937_RS01675
location: 370664..373003
location: region:370664-373003:1
so has part: feature:370664-373003:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:370664-373003:1:exon

DDA3937_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: elbB
locus tag: DDA3937_RS01680
old locus tag: Dda3937_00714
so part of: sequence
location: 373240..373893
location: region:373240-373893:1
so has part: feature:373240-373893:1:exon
subclass of: SO_0000010

9731737
type: Gene
SIO_000068: ncbigene

position:373240:1
position: 373240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373893:1
position: 373893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373240-373893:1:exon

DDA3937_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: elbB
locus tag: DDA3937_RS01680
old locus tag: Dda3937_00714
EC number: 4.2.1.-
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943083.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isoprenoid biosynthesis glyoxalase ElbB
translation: MKKVGVVLSGCGVYDGSEIHEVVLTLLAIDRAGAEAVCFAPDKQQLHVINHLTGEVTGEKRNVLAESARIARGKIQPLSSADPQQLDALIVPGGFGAAKNLSDFATRGADCEIDNELKILTREIHKKNKPIGFICIAPAMLPKLLDTSVQLTIGNDEGTAQAIEAMGGVHVTCPVDDIVVDVAHKVVTTPAYMLANSIGEAASGIEKLVTRVLELAE
SIO_010081: DDA3937_RS01680
subclass of: SO_0000673
so part of: DDA3937_RS01680
location: 373240..373893
location: region:373240-373893:1
so has part: feature:373240-373893:1:exon

WP_013316035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373240-373893:1:exon

DDA3937_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: mtgA
locus tag: DDA3937_RS01685
old locus tag: Dda3937_00715
so part of: sequence
location: 373890..374639
location: region:373890-374639:1
so has part: feature:373890-374639:1:exon
subclass of: SO_0000010

9731738
type: Gene
SIO_000068: ncbigene

position:373890:1
position: 373890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374639:1
position: 374639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373890-374639:1:exon

DDA3937_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: mtgA
locus tag: DDA3937_RS01685
old locus tag: Dda3937_00715
EC number: 2.4.1.129
function: 1.6.7 metabolism; macromolecules (cellular constituent) biosynthesis; peptidoglycan (murein)
function: 6.2 cell structure; peptidoglycan (murein)
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091949.1
GO component: GO:0016020 - membrane [Evidence IEA]; GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: monofunctional biosynthetic peptidoglycan transglycosylase
translation: MRSAGLFGKGRLGRLAVCVRRWVLRIFIGVVAMWLAAILLFAFLPVPFSAVMIDRQLSAWLSGDFAYVAHSDWVSMDEIAAVAPLAVIAAEDQKFPQHWGFDFDAISAALRHNERHENRIRGASTLSQQTVKNLLLWDGRSWVRKGLEAGLTAVVELVWTKRRILTVYLNIAEFGPGIFGIEAASRQFFNKPASRLTASEAAMLAAVLPNPIRYRASKPSGYVMRRQQWILRQMSQIGGENFLEANRLY
SIO_010081: DDA3937_RS01685
subclass of: SO_0000673
so part of: DDA3937_RS01685
location: 373890..374639
location: region:373890-374639:1
so has part: feature:373890-374639:1:exon

WP_013316036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373890-374639:1:exon

DDA3937_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01690
old locus tag: Dda3937_00716
so part of: sequence
location: 374733..376034
location: region:374733-376034:1
so has part: feature:374733-376034:1:exon
subclass of: SO_0000010

9731739
type: Gene
SIO_000068: ncbigene

position:374733:1
position: 374733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376034:1
position: 376034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374733-376034:1:exon

DDA3937_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01690
old locus tag: Dda3937_00716
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848095.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alginate lyase family protein
translation: MRYGLVFLMTLSLWGLEVSAAAVSVKNDNSAYVFLQADKLAQVKQQLRNQSAPPQMQLAYQQLLRAADSDMKKTDLSVTQKLSMPPGGNRHDYLSLAAYWWPDPQRKDGLPWVRHDGKVNPATKGEETDAIRLATFTDRVQVLALAWYFSDRPEYAAKAASMIRTWFITPDTRMNPNLNYAQAIPGRNDGRGAGVLDGRFFATRIVDALVILRQAPGWSVSDEQQMRQWMTDYLQWLLSSHNGKQEAAAKNNHGSWYTVQVAGIAAYLGQPETVKAMAALQRQKLDHQLAADGSQPEELARTRSFHYSGFNLQAVSMMAAVAGKYGDNLWLYRTPNGSSLLSALDFMTPYLDESRPWPYKTMGREGSPLIPLMMQAEQAIGSPRYQAAIRQAGFAPLLTGASEGKKDAEVSVDTRRRIWLLSPPSSTGNTPTP
SIO_010081: DDA3937_RS01690
subclass of: SO_0000673
so part of: DDA3937_RS01690
location: 374733..376034
location: region:374733-376034:1
so has part: feature:374733-376034:1:exon

WP_033111539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374733-376034:1:exon

DDA3937_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: dolP
locus tag: DDA3937_RS01695
old locus tag: Dda3937_00717
so part of: sequence
location: complement(376127..376702)
location: region:376127-376702:-1
so has part: feature:376127-376702:-1:exon
subclass of: SO_0000010

9731740
type: Gene
SIO_000068: ncbigene

position:376127:-1
position: 376127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376702:-1
position: 376702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376127-376702:-1:exon

DDA3937_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: dolP
locus tag: DDA3937_RS01695
old locus tag: Dda3937_00717
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943080.1
GO process: GO:0006970 - response to osmotic stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: division/outer membrane stress-associated lipid-binding lipoprotein
translation: MRIYSCIAVLSACLMLQGCIGAVAIGSAAVATKSATDPRTVGTQVDDGTLEVRVSNALSKDTQLSKEARISVTAYQGKVLLTGQAPSTELASRAKQIAMGVEGTTEVYNEIRKGTPISLGTASMDTWITTKVRSQLLASDTVKSSNVKVTTENGEVFLLGLVTRREGTSAAQIASKVGGVKHVTTAFSYLD
SIO_010081: DDA3937_RS01695
subclass of: SO_0000673
so part of: DDA3937_RS01695
location: complement(376127..376702)
location: region:376127-376702:-1
so has part: feature:376127-376702:-1:exon

WP_013316038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376127-376702:-1:exon

DDA3937_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: diaA
locus tag: DDA3937_RS01700
old locus tag: Dda3937_00718
so part of: sequence
location: complement(376713..377303)
location: region:376713-377303:-1
so has part: feature:376713-377303:-1:exon
subclass of: SO_0000010

9731741
type: Gene
SIO_000068: ncbigene

position:376713:-1
position: 376713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377303:-1
position: 377303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376713-377303:-1:exon

DDA3937_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: diaA
locus tag: DDA3937_RS01700
old locus tag: Dda3937_00718
function: 1.1.1 metabolism; carbon utilization; carbon compounds
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312057.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DnaA initiator-associating protein DiaA
translation: MLERIKVCFTESIQTQIAAAEALPDAISRAALAMVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNADNVVLTAIANDRLHEEVYAKQVRALGQAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGQQDVEIRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQND
SIO_010081: DDA3937_RS01700
subclass of: SO_0000673
so part of: DDA3937_RS01700
location: complement(376713..377303)
location: region:376713-377303:-1
so has part: feature:376713-377303:-1:exon

WP_013316039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376713-377303:-1:exon

DDA3937_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01705
old locus tag: Dda3937_00719
so part of: sequence
location: complement(377341..377697)
location: region:377341-377697:-1
so has part: feature:377341-377697:-1:exon
subclass of: SO_0000010

23677386
type: Gene
SIO_000068: ncbigene

position:377341:-1
position: 377341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377697:-1
position: 377697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377341-377697:-1:exon

DDA3937_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01705
old locus tag: Dda3937_00719
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883066.1
GO function: GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YraN family protein
translation: MNRRITGGRYEQLARRHLERAGLIFVAANVTVRGGELDLIMRDGGTWVFVEVRYRRNSDFGGAVASITRQKQQSLLRAAAVWLSRQGASFDSTDCRFDVLAVTGSQVEWLPNAFGQSE
SIO_010081: DDA3937_RS01705
subclass of: SO_0000673
so part of: DDA3937_RS01705
location: complement(377341..377697)
location: region:377341-377697:-1
so has part: feature:377341-377697:-1:exon

WP_171850599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377341-377697:-1:exon

DDA3937_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01710
old locus tag: Dda3937_00720
so part of: sequence
location: complement(377694..379745)
location: region:377694-379745:-1
so has part: feature:377694-379745:-1:exon
subclass of: SO_0000010

9731743
type: Gene
SIO_000068: ncbigene

position:377694:-1
position: 377694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379745:-1
position: 379745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377694-379745:-1:exon

DDA3937_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01710
old locus tag: Dda3937_00720
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848091.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding protein activator
translation: MLPLNSVRTHAGRLVPVMLAALFLAGCPSQAPQGTATQQHIEGKAGASSDYYLQQMQQSGDDSKADWQLLAIHALIQEGKLPQANGQLNALPSQLNDKQRQEQRLLLAELAVAQNDLNAANSTLAQLDVKSLSPQQQERYYQTQIKAAQDRPSLMLIRAYIGQEPLLQGDAHQRNIDQTWAALTRLTQQDMGSMVINVDENTLQGWLDLLNLWQTKAQVPSDLQAAIEDWKRRYPRHPAAKQLPSQLGGTPPAAAAQPGDNAPAGGNAIALLLPLNGQAQVFANAIQQGFSAARSGQVSLAMPVQTAQSASTAATTASPAAPATTTPDMIGTSPTAPTTSSAPSTTATAVPALTTAAAGTIPVKVYDTSNQALANVIAQAQKDGATTIVGPLLKNEVEQLPGLNPTLNVLALNQPEHIQPNPNICYFALSPEDEAADAAQFIHKQGKQHPLILAPRGNLGDRVVAAFAKSWQQQAGGVVLQQRTGGVYDLKQALNSGAGIPLNGQPVITAASAPQPSTTVGGLTIPNQAPPIATATSDGNVDAVYIIATPDELTLLKPMIDMRNKGALRPALYASSRSYQAGLGPDFRFEMEGLQFSDIPLLTGASPALMQQISTQFRNDYSLVRLFAMGMDAWKLASNFSQLHQPGNSLSGATGVLSTSPDCVVNRKLTWLQFRQGQLVPAS
SIO_010081: DDA3937_RS01710
subclass of: SO_0000673
so part of: DDA3937_RS01710
location: complement(377694..379745)
location: region:377694-379745:-1
so has part: feature:377694-379745:-1:exon

WP_013316041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377694-379745:-1:exon

DDA3937_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rsmI
locus tag: DDA3937_RS01715
old locus tag: Dda3937_00721
so part of: sequence
location: 379805..380674
location: region:379805-380674:1
so has part: feature:379805-380674:1:exon
subclass of: SO_0000010

9731744
type: Gene
SIO_000068: ncbigene

position:379805:1
position: 379805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380674:1
position: 380674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379805-380674:1:exon

DDA3937_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rsmI
locus tag: DDA3937_RS01715
old locus tag: Dda3937_00721
EC number: 2.1.1.198
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009114718.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
translation: MNQDQQAQISASTLYIVPTPIGNLADITQRALAVLQQVDLIAAEDTRHTGLLLQHFAINARLFALHDHNEQQKAEQLLARLQQGMSIALVSDAGTPLINDPGYHLVRRCREAGVRVMPLPGPCAAITALSAAGLPSDRFCYEGFLPAKTKARKDTLRDLLEEPRTLIFYESTHRLLDSLQDMVDVWGPERYVVLARELTKTWESLYGAPVAELLAWVQDDDNRRKGEMVLIVEGHRPDEEALSAAALRTLQLLRAELPLKKAAALAAEIHGVKKNALYRYGLEQEDGHA
SIO_010081: DDA3937_RS01715
subclass of: SO_0000673
so part of: DDA3937_RS01715
location: 379805..380674
location: region:379805-380674:1
so has part: feature:379805-380674:1:exon

WP_013316042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379805-380674:1:exon

DDA3937_RS21725
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rnpB
locus tag: DDA3937_RS21725
old locus tag: Dda3937_04682
so part of: sequence
location: 380717..381097
location: region:380717-381097:1
so has part: feature:380717-381097:1:exon
subclass of: SO_0000011

25395714
type: Gene
SIO_000068: ncbigene

position:380717:1
position: 380717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381097:1
position: 381097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380717-381097:1:exon

DDA3937_RS21725
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 198628
nc RNA class: RNase_P_RNA
gene: rnpB
locus tag: DDA3937_RS21725
old locus tag: Dda3937_04682
product: RNase P RNA component class A
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00010
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DDA3937_RS21725
subclass of: SO_0000673
so part of: DDA3937_RS21725
location: 380717..381097
location: region:380717-381097:1
so has part: feature:380717-381097:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380717-381097:1:exon

DDA3937_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01720
old locus tag: Dda3937_00722
so part of: sequence
location: 381360..382169
location: region:381360-382169:1
so has part: feature:381360-382169:1:exon
subclass of: SO_0000010

9731746
type: Gene
SIO_000068: ncbigene

position:381360:1
position: 381360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382169:1
position: 382169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381360-382169:1:exon

DDA3937_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01720
old locus tag: Dda3937_00722
function: 1.5.1 metabolism; building block biosynthesis; amino acids
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020803742.1
GO function: GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shikimate 5-dehydrogenase
translation: MLNKDTKLCISLSGRPSNIGTRFHNYLYQKLDLDFIYKAFTTSDIEHAVKGVRALGIRGCSVSMPFKESCIPFIDTLSDSAKAIDSVNTIVNENGHLTAYNTDYIAVKYLINQNLKDKTMHVLIKGSGGMAKAVIAAFRDSDFRQVTILARNEERGLSLANKYGFQWCRDAAGIKADILVNVTPVGMAGGEEQNQLAFTEDQIRIASHIFDVVAFPAETPLIQLARKGDKPVITGAQVIALQALEQFALYTGIRPSEALMQEASVYSRS
SIO_010081: DDA3937_RS01720
subclass of: SO_0000673
so part of: DDA3937_RS01720
location: 381360..382169
location: region:381360-382169:1
so has part: feature:381360-382169:1:exon

WP_013316043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381360-382169:1:exon

DDA3937_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ygiD
locus tag: DDA3937_RS01725
old locus tag: Dda3937_00723
so part of: sequence
location: 382348..383136
location: region:382348-383136:1
so has part: feature:382348-383136:1:exon
subclass of: SO_0000010

9731747
type: Gene
SIO_000068: ncbigene

position:382348:1
position: 382348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383136:1
position: 383136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382348-383136:1:exon

DDA3937_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ygiD
locus tag: DDA3937_RS01725
old locus tag: Dda3937_00723
EC number: 1.13.11.29
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004948311.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4,5-DOPA dioxygenase extradiol
translation: MSTSRMPALFLGHGSPMNALDENDYTLAWRKLGETLPRPKAIVAVSAHWYTRGTAVTAMDKPRTIHDFGGFPQALFDTQYPAPGAPDVAKRVQDVLAPVSVYADHQEWGLDHGTWGVLIKVYPEADIPVVQLSVDGTKPPAYHYELGRKLAALRDEGIMIVASGNVVHNLRMIKWNGDGAPYGWATSFNDFVRSNLAWQGDAAEHPLVNFMQHNDAALSNPTPDHFLPLLYVLGSWDGQEPVSTPTDGIVMGSLSMMSVQVG
SIO_010081: DDA3937_RS01725
subclass of: SO_0000673
so part of: DDA3937_RS01725
location: 382348..383136
location: region:382348-383136:1
so has part: feature:382348-383136:1:exon

WP_013316044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382348-383136:1:exon

DDA3937_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01730
old locus tag: Dda3937_00724
so part of: sequence
location: complement(383261..384421)
location: region:383261-384421:-1
so has part: feature:383261-384421:-1:exon
subclass of: SO_0000010

9731748
type: Gene
SIO_000068: ncbigene

position:383261:-1
position: 383261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384421:-1
position: 384421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383261-384421:-1:exon

DDA3937_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01730
old locus tag: Dda3937_00724
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017801258.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathionylspermidine synthase family protein
translation: MKRIAINERPNWQEKAAEYGFRFHTMYGEPYWCEDAYYQFTLAQIEELEDATAELNQMCLQVVDKVVNSEALLTKFRIPRHTWDFVRSSWLSRQPALYARLDLAYDGKNPAKLLENNADTPTSLYESAFFQWIWLEDQINAGRLPQHADQYNSLQEQLIERFEYLRTHHGFGNMHFTCCRDTDEDRGTVQYLQDCAQEAGVPSQFLYIDEIGLGDRGQFTDLQDNTIGNLFKLYPWEFMLRETFSTKLADAGVRWLEPGWKSVVSNKALLPMLWQMFPNHPNLLPAYFTEDNPPAMSDYVVKPLFSREGANIRIYRQGQQVAAVDGPYGEEGSIVQQFHPLPRFNDSYTLIGSWLVGDNPCGIGLREDRELITQDLSRLYPHIILD
SIO_010081: DDA3937_RS01730
subclass of: SO_0000673
so part of: DDA3937_RS01730
location: complement(383261..384421)
location: region:383261-384421:-1
so has part: feature:383261-384421:-1:exon

WP_013316045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383261-384421:-1:exon

DDA3937_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01735
old locus tag: Dda3937_00725
so part of: sequence
location: complement(384433..385194)
location: region:384433-385194:-1
so has part: feature:384433-385194:-1:exon
subclass of: SO_0000010

9731749
type: Gene
SIO_000068: ncbigene

position:384433:-1
position: 384433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385194:-1
position: 385194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384433-385194:-1:exon

DDA3937_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01735
old locus tag: Dda3937_00725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843587.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1190 family protein
translation: MKRTSNINHARFRKRWGYRIAPIALAVGAVFILSGCEKTDETVSLYQNADDCSRANPAMKDQCTTTYNNARKEAERTAPKYATREECVAAFGESQCTQSATTSTTASAAAPQQSGSFWMPLMAGFMMGKLMGGNNFAQQPVFRPNTPNNPANGSYVDASGKNYGSATGRTITVPKDAMTPKPTSSVRPSSITTTRGGFGDSVNKLNSTPAANMTGNQDRDRAATSTSSSSSSATGSSTRQTGSSTPIRRSFGG
SIO_010081: DDA3937_RS01735
subclass of: SO_0000673
so part of: DDA3937_RS01735
location: complement(384433..385194)
location: region:384433-385194:-1
so has part: feature:384433-385194:-1:exon

WP_033111540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384433-385194:-1:exon

DDA3937_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: tolC
locus tag: DDA3937_RS01740
old locus tag: Dda3937_00726
so part of: sequence
location: complement(385387..386799)
location: region:385387-386799:-1
so has part: feature:385387-386799:-1:exon
subclass of: SO_0000010

9731750
type: Gene
SIO_000068: ncbigene

position:385387:-1
position: 385387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386799:-1
position: 386799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385387-386799:-1:exon

DDA3937_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: tolC
locus tag: DDA3937_RS01740
old locus tag: Dda3937_00726
function: tolC is involved in resistance to antimicrobial plant chemicals and is essential for phytopathogenesis
function: 7.4 location of gene products; outer membrane
function: 6.1 cell structure; membrane
function: 5.1 cell processes; cell division
function: 4.1.B.17 transport; Channel-type Transporters; Beta barrel porins (The Outer Membrane Porin (OMP) Functional Superfamily); The Outer Membrane Factor (OMF) Family
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013316047.1
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane channel protein TolC
translation: MKKLLPLLISLGLGGFSAVSQAEDLLQVYQQAKTTNPDLRSAAANRDAAFEKINEARSSLLPQLGLGADYTYTSGYRDRRDINSNATSASLQLTQSIFNMSLWRALTLQEKQAGIQDVSYQTSQQTLLLNTATAYFNVLRAIDSLSYVSAQKQSIYRELDQTTQRFNVGLVAITDVQNARAQYDSVLASEVTARNNLDNAMETLRQVTGQFYPQLAGLNIDRFSPQKPDAVNGLLKEAENRNLSLLSARLSQDLAREQIRSAESGHLPTLNLTASTGVTNTDYSGSRAVGDNFNNTYVGQNQVGLSFSLPIYSGGGTSSRVKQAQHSFVASSESMESAHRSVIQTLRSAHNNISASISSVNAYKQAVISAQSSLDAMEAGYQVGTRTIVDVLDATTTLYNAKQQLSGARYDYLINQLNLKQALGTLNEDDLRTLNAMLGKPVSTSAAIGDDVPAPATTPAAAKTAAKAKP
SIO_010081: DDA3937_RS01740
subclass of: SO_0000673
so part of: DDA3937_RS01740
location: complement(385387..386799)
location: region:385387-386799:-1
so has part: feature:385387-386799:-1:exon

WP_013316047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385387-386799:-1:exon

DDA3937_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: nudF
locus tag: DDA3937_RS01745
old locus tag: Dda3937_04303
so part of: sequence
location: 387203..387838
location: region:387203-387838:1
so has part: feature:387203-387838:1:exon
subclass of: SO_0000010

9731751
type: Gene
SIO_000068: ncbigene

position:387203:1
position: 387203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387838:1
position: 387838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387203-387838:1:exon

DDA3937_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: nudF
locus tag: DDA3937_RS01745
old locus tag: Dda3937_04303
EC number: 3.6.1.13
function: 7.1 location of gene products; cytoplasm
function: 1.1 metabolism; carbon utilization
function: 1.7.8 metabolism; central intermediary metabolism; gluconeogenesis
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855273.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ADP-ribose diphosphatase
translation: MASSGTHPGTFTKDDVEIIARETLYKGFFSLQRYRFRHRLFNGGMSGEVSREILERGHAVVLLPYDPVRDEVVLIEQIRIAAYDTSTSPWLFELVAGMIEPGESLEEVARREAQEEAGLMVQRCRPALSYLASPGGTSERLAIWVGEVDAGAAGGIHGLAEEHEDIRVHVVSREQSYQWVEQGIIDNAASVIALQWLALHHETLKKDWVDG
SIO_010081: DDA3937_RS01745
subclass of: SO_0000673
so part of: DDA3937_RS01745
location: 387203..387838
location: region:387203-387838:1
so has part: feature:387203-387838:1:exon

WP_013316048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387203-387838:1:exon

DDA3937_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01750
old locus tag: Dda3937_04304
so part of: sequence
location: 387838..388260
location: region:387838-388260:1
so has part: feature:387838-388260:1:exon
subclass of: SO_0000010

9731752
type: Gene
SIO_000068: ncbigene

position:388260:1
position: 388260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387838-388260:1:exon

DDA3937_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01750
old locus tag: Dda3937_04304
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883074.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1249 family protein
translation: MKRYVPDFPEMMRLSEINFAQLRRLLPRNEEAGAAVVYQVHNASYRLTILESTRYTALVEIQQIAPSVSYWSLPTLVVRLYYDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLACGSMSVPVC
SIO_010081: DDA3937_RS01750
subclass of: SO_0000673
so part of: DDA3937_RS01750
location: 387838..388260
location: region:387838-388260:1
so has part: feature:387838-388260:1:exon

WP_013316049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387838-388260:1:exon

DDA3937_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: cpdA
locus tag: DDA3937_RS01755
old locus tag: Dda3937_01249
so part of: sequence
location: 388465..389292
location: region:388465-389292:1
so has part: feature:388465-389292:1:exon
subclass of: SO_0000010

9731753
type: Gene
SIO_000068: ncbigene

position:388465:1
position: 388465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389292:1
position: 389292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388465-389292:1:exon

DDA3937_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: cpdA
locus tag: DDA3937_RS01755
old locus tag: Dda3937_01249
EC number: 3.1.4.53
function: 1.1.1 metabolism; carbon utilization; carbon compounds
function: 3.1.3.4 regulation; type of regulation; posttranscriptional; proteases, cleavage of compounds
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005975549.1
GO function: GO:0004115 - 3',5'-cyclic-AMP phosphodiesterase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3',5'-cyclic-AMP phosphodiesterase
translation: MESLLTLPVARGARIRILQITDTHLFAGERETLLGVDTYRSYQAVLDAIAAQQCDFDLITATGDLAQDHTQEAYTRFADGIRRFNAPCVWLPGNHDFQPAMVDVLARSGIAPSKHVLLGEHWQVILLDSQVFGVPHGELSEYQLEWLERSLQSQPERYTLLMLHHHPLPSGCTWLDQHSLRNAHSLDALLARFPRVRTVLCGHIHQEMDLDWNGRRLLATPSTCVQFKPHCTSFTIDNVAPGWRYLELLPDGVLETQVCRLEGNEFLPDMDSDGY
SIO_010081: DDA3937_RS01755
subclass of: SO_0000673
so part of: DDA3937_RS01755
location: 388465..389292
location: region:388465-389292:1
so has part: feature:388465-389292:1:exon

WP_013316050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388465-389292:1:exon

DDA3937_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: yqiA
locus tag: DDA3937_RS01760
old locus tag: Dda3937_01250
so part of: sequence
location: 389292..389873
location: region:389292-389873:1
so has part: feature:389292-389873:1:exon
subclass of: SO_0000010

9731754
type: Gene
SIO_000068: ncbigene

position:389873:1
position: 389873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389292-389873:1:exon

DDA3937_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: yqiA
locus tag: DDA3937_RS01760
old locus tag: Dda3937_01250
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012822130.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: esterase YqiA
translation: MPTLLYLHGFNSSPLSAKATALQQWLAQHHPHIDMLVPQLPPYPADAAEMVEQLVMERAGRPLGLVGSSMGGYYATWLSQRFRLPAVVVNPAVRPYELLLDFLGDQQNPYTGEQYVLESRHIYDLKVMQVDPLESPDLLWCLLQTGDEVLDYRQAVAYYTACRQTVESGGNHAFVGFEHYFAPIIDFLGLTAD
SIO_010081: DDA3937_RS01760
subclass of: SO_0000673
so part of: DDA3937_RS01760
location: 389292..389873
location: region:389292-389873:1
so has part: feature:389292-389873:1:exon

WP_013316051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389292-389873:1:exon

DDA3937_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: parE
locus tag: DDA3937_RS01765
old locus tag: Dda3937_01251
so part of: sequence
location: 390060..391955
location: region:390060-391955:1
so has part: feature:390060-391955:1:exon
subclass of: SO_0000010

9731755
type: Gene
SIO_000068: ncbigene

position:390060:1
position: 390060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391955:1
position: 391955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390060-391955:1:exon

DDA3937_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: parE
locus tag: DDA3937_RS01765
old locus tag: Dda3937_01251
EC number: 5.6.2.2
function: 2.1.1 information transfer; DNA related; DNA replication
function: 3.1.1.1 regulation; type of regulation; DNA structure level; DNA bending, supercoiling, inversion
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016257886.1
GO component: GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase IV subunit B
translation: MTQSSYNADAIEVLSGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHARRIDVILHPDQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVNALSTRVEVTVRRDGQVYDIAFENGDKVQDLTVTGTCGRRNTGTRVHFWPDASFFDSPRFSVLSLTHLLKAKAVLCPGVEIVFKDGVNDTEQRWCYQGGLSDYLCEAVNGLPTLPEKPFIGTIPGDTEAVEWALLWLPEGGELLTESYVNLIPTLQGGTHVNGLRQGLLDAMREFCEFRNILPRGVKLSAEDIWERCAYVLSLKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFSLWLNQNVQAAEQLAEMAISSAQRRMRAAKKVVRKKLTSGPALPGKLADCTSQDLSKTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKVCILADADSDGLHIATLLCALFVRHFRALVQGGHVHVAMPPLYRIDLGKEVYYALDEEEKAGILEQLKRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLTINEQDIEQTLATMDMLLAKKRAEDRRNWLQEKGDKAELDV
SIO_010081: DDA3937_RS01765
subclass of: SO_0000673
so part of: DDA3937_RS01765
location: 390060..391955
location: region:390060-391955:1
so has part: feature:390060-391955:1:exon

WP_013316052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390060-391955:1:exon

DDA3937_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01770
old locus tag: Dda3937_01252
so part of: sequence
location: 391968..392864
location: region:391968-392864:1
so has part: feature:391968-392864:1:exon
subclass of: SO_0000010

9731756
type: Gene
SIO_000068: ncbigene

position:391968:1
position: 391968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392864:1
position: 392864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391968-392864:1:exon

DDA3937_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01770
old locus tag: Dda3937_01252
function: 3.1.2 regulation; type of regulation; transcriptional level
function: 2.2.2 information transfer; RNA related; transcription related
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943067.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MKVTLEEMQAFVVVVDCGSVTAAAGQLGQTTSGISRALGRLESKLGMTLLHRTTRRLALSEEGQIFLQHARDVLQTVELAEEQIALRRRKPSGRLRINAAASFMQHVIVPLIPEFRRRYPCISLELNTDDVIIDLLEQHTDVAIRIGELRDSSIHARPLGATRLRILASPEYLSRHGTPLGVEALAGHTLLGFTQSESLNLWPLRSAFGDYYPIVPTIAASNGEMLRQLALRGEGIVRLSDFMTRDDVAAGRLVQILADDTLEMRLPVNAVFYRNTALASRIVSFLDFLSEKMAQHPL
SIO_010081: DDA3937_RS01770
subclass of: SO_0000673
so part of: DDA3937_RS01770
location: 391968..392864
location: region:391968-392864:1
so has part: feature:391968-392864:1:exon

WP_013316053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391968-392864:1:exon

DDA3937_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01775
old locus tag: Dda3937_01253
so part of: sequence
location: complement(392915..393496)
location: region:392915-393496:-1
so has part: feature:392915-393496:-1:exon
subclass of: SO_0000010

9731757
type: Gene
SIO_000068: ncbigene

position:392915:-1
position: 392915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393496:-1
position: 393496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392915-393496:-1:exon

DDA3937_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01775
old locus tag: Dda3937_01253
EC number: 1.-.-.-
EC number: 1.6.99.-
function: 1.4.1 metabolism; energy production/transport; electron donor
function: 5.6.4 cell processes; protection; drug resistance/sensitivity
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019453060.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-dependent oxidoreductase
translation: MHNVLIINAGKSFGHSKGELNRTLTDVAASFLRDKGRHVRITTVDEGYDIEQEVQNFLWADAVIYQMPGWWMGAPWILKKYIDDVFTAGHGSLYASDGRTRADASKKYGSGGLLQGKHYLLSLTWNAPLEAFTDPDQFFHGVGVDGVYLPFHKANQFIGLSSLPTFICNDVIKQPDVEQDIARYRAHLDQVFA
SIO_010081: DDA3937_RS01775
subclass of: SO_0000673
so part of: DDA3937_RS01775
location: complement(392915..393496)
location: region:392915-393496:-1
so has part: feature:392915-393496:-1:exon

WP_013316054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392915-393496:-1:exon

DDA3937_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: parC
locus tag: DDA3937_RS01780
old locus tag: Dda3937_01254
so part of: sequence
location: 393774..396050
location: region:393774-396050:1
so has part: feature:393774-396050:1:exon
subclass of: SO_0000010

9731758
type: Gene
SIO_000068: ncbigene

position:393774:1
position: 393774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396050:1
position: 396050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393774-396050:1:exon

DDA3937_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: parC
locus tag: DDA3937_RS01780
old locus tag: Dda3937_01254
EC number: 5.6.2.2
function: 2.1.1 information transfer; DNA related; DNA replication
function: 2.1.2 information transfer; DNA related; DNA restriction/modification
function: 2.1.4 information transfer; DNA related; DNA repair
function: 3.1.1.1 regulation; type of regulation; DNA structure level; DNA bending, supercoiling, inversion
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019453059.1
GO component: GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase IV subunit A
translation: MSDMTHDGAERLALHTFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLSASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTESRLSKYAEVLLGELGQGTVDYVPNFDGTMQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNVREVAAAAVALIDEPDTQLDALLRYVQGPDFPTEAEIITPRDEIRKMYESGRGSVRMRAVWKKEDGSVVITALPHQVSGARVLEQIASQMRAKKLPMIDDLRDESDHENPTRLVLVPRSNRIDLDLVMNHLFATTDLEKSYRINMNMIGLDGRPSVKGLREILTEWLAFRRDTVRRRLNFRLDKVLKRLHILEGLLIAFLNIDEVIHIIRNEDEPKPVLMAKFGLSDTQAEAILELKLRHLAKLEEMKIRGEQDDLAKERDQIQALLASERKMNSLLKKEIQEDAKAYGDERRSPLHERGEAKAMSEHDLSPSEPVTIVLSEMGWVRSAKGHDIDPSGLSYKAGDAYRAAARGKSNQPVVFMDSTGRSYALDPLTLPSARGQGEPLTGKLTLPPGATIEQVLMAADNQRLLLASDAGYGFICTFADLVARNRVGKAVLTLPDNAHVLPPLELQRDDDLLLTVTAAGRMLLFPVADLPELSKGKGNKIVSIPAAQLASGDDRILWLLAIAPHSSVTLYAGKRKYSLRPEELQKYQASRGCKGTALPRGLQRVDRIEVDAPAGIASAGSSEE
SIO_010081: DDA3937_RS01780
subclass of: SO_0000673
so part of: DDA3937_RS01780
location: 393774..396050
location: region:393774-396050:1
so has part: feature:393774-396050:1:exon

WP_013316055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393774-396050:1:exon

DDA3937_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01785
old locus tag: Dda3937_01255
so part of: sequence
location: 396291..397028
location: region:396291-397028:1
so has part: feature:396291-397028:1:exon
subclass of: SO_0000010

9731759
type: Gene
SIO_000068: ncbigene

position:396291:1
position: 396291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397028:1
position: 397028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396291-397028:1:exon

DDA3937_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01785
old locus tag: Dda3937_01255
EC number: 2.3.1.51
function: 1.6.1 metabolism; macromolecules (cellular constituent) biosynthesis; phospholipid
function: 7.3 location of gene products; inner membrane
function: 1.5.4 metabolism; building block biosynthesis; fatty acid and phosphatidic acid
function: 6.1 cell structure; membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843595.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1-acylglycerol-3-phosphate O-acyltransferase
translation: MLFILRFLVVIVYSVVLCLAGLIYCLFTPKDPRHVSRFGRLFGRLSVVFGLKVEVRRPEASRVEGNCIYIANHQNNYDMVTASNVVVPGTVTVGKKSLVWIPFFGPLYWLAGNLLIDRDNRAKAHGTISQVVKHIKERNISVWMFPEGTRSRGRGLMPFKTGAFHAAIAAGVPVVPICVSTTHKKVKLNRWNNGHVIIELLPPIDCSAYGKEQVRELAAYCHDLMAAKIAQLDAEVAQREAAEKR
SIO_010081: DDA3937_RS01785
subclass of: SO_0000673
so part of: DDA3937_RS01785
location: 396291..397028
location: region:396291-397028:1
so has part: feature:396291-397028:1:exon

WP_013316056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396291-397028:1:exon

DDA3937_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ftsP
locus tag: DDA3937_RS01790
old locus tag: Dda3937_01256
so part of: sequence
location: 397116..398534
location: region:397116-398534:1
so has part: feature:397116-398534:1:exon
subclass of: SO_0000010

9731760
type: Gene
SIO_000068: ncbigene

position:397116:1
position: 397116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398534:1
position: 398534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397116-398534:1:exon

DDA3937_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ftsP
locus tag: DDA3937_RS01790
old locus tag: Dda3937_01256
function: 5.1 cell processes; cell division
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013316057.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsP
translation: MSLSRRQFIQASGIALCAGAMPLTARADGGKNPLPVPPLLESRRGQPVFLTMQRAHWSFSGERKNPVWGFNGRYLGPTVRVFSNDDVKLIYSNRLNEPVSMTVSGLQVPGSLMGGAGRMIQPNMDWSPVLPVRQAAATCWYHANTPNRMAPHVYNGLAGLWLVEDSLSKSLPIPNHYGVDDFPLIIQDKRLDNFGAPLYNPPSSGGFMGDTLLVNGARNPYVEVSRGWVRLRLLNASNARRYVMRMSDGRPLHLIANDQGFLPAPMALNQMSLAPGERREVLVDMSQGNEATLTAGESASIMQRLRGLFEPSNILVSSAILTLRPTGLLPLVTNTLPMRLLADNIIDGAVSRTREFRLGDSLPGINGAMWDVNRVDVQTQVGRYERWIVHADQPQPFHVQGAAFLVRSVNGGLTPPEDSGWKDTVWVENDVELLVYFGQFSTPQFPFLYYSHTLEMADRGSIAQLVAQASNG
SIO_010081: DDA3937_RS01790
subclass of: SO_0000673
so part of: DDA3937_RS01790
location: 397116..398534
location: region:397116-398534:1
so has part: feature:397116-398534:1:exon

WP_013316057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397116-398534:1:exon

DDA3937_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: dkgA
locus tag: DDA3937_RS01795
old locus tag: Dda3937_01257
so part of: sequence
location: complement(398594..399439)
location: region:398594-399439:-1
so has part: feature:398594-399439:-1:exon
subclass of: SO_0000010

9731761
type: Gene
SIO_000068: ncbigene

position:398594:-1
position: 398594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399439:-1
position: 399439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398594-399439:-1:exon

DDA3937_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: dkgA
locus tag: DDA3937_RS01795
old locus tag: Dda3937_01257
function: 7.1 location of gene products; cytoplasm
function: 1.1.1 metabolism; carbon utilization; carbon compounds
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943062.1
GO function: GO:0050580 - 2,5-didehydrogluconate reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,5-didehydrogluconate reductase DkgA
translation: MTMQPLVKLADGNIMPQLGLGVWQASNEQAAAAVTEALNIGYRAIDTAAIYKNETGVGKALQQTDIPRSDIFITTKLWNSDQAHPRQALEESLRKLQLEYVDLYLIHWPLPEQNTYVEAWRGLLNLKEQGLAKSVGVCNFNPHHLQRLKEETGVMPVINQIELHPLFQQRMLNTWNTTHHIQTESWSPLAQGGEGVFDHPVIHALAKKYGKTPAQIVIRWHLDCGLVVIPKSVTPARIRENFEVFDFRLEKEELSEVATLDCGKRLGPDPDQPRTDAPRKD
SIO_010081: DDA3937_RS01795
subclass of: SO_0000673
so part of: DDA3937_RS01795
location: complement(398594..399439)
location: region:398594-399439:-1
so has part: feature:398594-399439:-1:exon

WP_013316058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398594-399439:-1:exon

DDA3937_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: yqhD
locus tag: DDA3937_RS01800
old locus tag: Dda3937_01258
so part of: sequence
location: complement(399627..400790)
location: region:399627-400790:-1
so has part: feature:399627-400790:-1:exon
subclass of: SO_0000010

9731762
type: Gene
SIO_000068: ncbigene

position:399627:-1
position: 399627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400790:-1
position: 400790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399627-400790:-1:exon

DDA3937_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: yqhD
locus tag: DDA3937_RS01800
old locus tag: Dda3937_01258
EC number: 1.1.1.2
function: 1.7.1 metabolism; central intermediary metabolism; unassigned reversible reactions
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:NP_417484.1
GO function: GO:1990362 - butanol dehydrogenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alcohol dehydrogenase
translation: MQNFTLHTPTKILFGEGQIASLADQIPADARILITYGGGSIKKNGVFDQVINALKGRNVLEFSGIEPNPTYETLMKAVEIVRKEKIDFLLAVGGGSVADGTKFIAAAAHYTAADDPWHILQTWGAQIETATPLGVVLTLPATGSESNSGAVITRKSSGDKQAFMNPLVCPRFAVLDPVVTYTLPERQIANGVVDAFVHTVEQYLTYPANAKVQDRFAEGLLLTLIEEGPRALKEQHNYDVRANVMWSATMALNGLIGAGVPQDWSTHMLGHEITAMHGLDHAQTLAIVLPAMLNERRVQKREKLLQYAERVWNLRDGSEDQRIDAAIAATRAFFEQMGVPTRLSDYQLDGSSIPAMVAKLEEHGMTALGEHHDITLDISRRVYEAAR
SIO_010081: DDA3937_RS01800
subclass of: SO_0000673
so part of: DDA3937_RS01800
location: complement(399627..400790)
location: region:399627-400790:-1
so has part: feature:399627-400790:-1:exon

WP_013316059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399627-400790:-1:exon

DDA3937_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01805
old locus tag: Dda3937_01259
so part of: sequence
location: 401257..402168
location: region:401257-402168:1
so has part: feature:401257-402168:1:exon
subclass of: SO_0000010

9731763
type: Gene
SIO_000068: ncbigene

position:401257:1
position: 401257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402168:1
position: 402168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401257-402168:1:exon

DDA3937_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01805
old locus tag: Dda3937_01259
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883086.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MQNLSSRQRLVNLAMLYAAGNGVSQTPIPQVKVIYIDRHGARAPVLYDPCIVIMFQGHKVGYLGDKVFQYDPDNYLLMTVPLPFECESFASPENPLVGISIRVDIPILQDLLIEMGDDGCGEKRRSDTAGINSVPLDEAILCATERLLEAMANARDARVLGPWMVREILYHVLCGPCGDSLQALMNRYSHFSQIARALRYIENYYADNLNVERLAAEVNMSVSAFHHNFKAVTNTSPVQYLKSYRLHKARLLMVHDGLKANVASMQVGYESPSQFSREFKRFFGVTPGDEVARLRGSGVVESS
SIO_010081: DDA3937_RS01805
subclass of: SO_0000673
so part of: DDA3937_RS01805
location: 401257..402168
location: region:401257-402168:1
so has part: feature:401257-402168:1:exon

WP_033111542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401257-402168:1:exon

DDA3937_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01810
old locus tag: Dda3937_01260
so part of: sequence
location: complement(402262..402921)
location: region:402262-402921:-1
so has part: feature:402262-402921:-1:exon
subclass of: SO_0000010

9731764
type: Gene
SIO_000068: ncbigene

position:402262:-1
position: 402262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402921:-1
position: 402921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402262-402921:-1:exon

DDA3937_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01810
old locus tag: Dda3937_01260
function: 7.3 location of gene products; inner membrane
function: 6.1 cell structure; membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843600.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DedA family protein
translation: MSVVHEIIQALWRQDFSALADPHVVWVIYGVLFTTLFLENGLLPASFLPGDSLLLLTGAMISKGVMSFIPTMVLLTVAASLGCWLSYLQGRWLGDTRLVKKWLHQLPAHYHQRTHNLFHQHGLAALLVGRFLAFVRTLLPTIAGVSGLSSTRFQIFNWLSGFLWVTGIVTLGYALSHIPLVKRYEDQVMTALCILPLVLLFSGLVGMLLVLWRKRRAMA
SIO_010081: DDA3937_RS01810
subclass of: SO_0000673
so part of: DDA3937_RS01810
location: complement(402262..402921)
location: region:402262-402921:-1
so has part: feature:402262-402921:-1:exon

WP_013316061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402262-402921:-1:exon

DDA3937_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: metC
locus tag: DDA3937_RS01815
old locus tag: Dda3937_01261
so part of: sequence
location: complement(403106..404299)
location: region:403106-404299:-1
so has part: feature:403106-404299:-1:exon
subclass of: SO_0000010

9731765
type: Gene
SIO_000068: ncbigene

position:403106:-1
position: 403106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404299:-1
position: 404299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403106-404299:-1:exon

DDA3937_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: metC
locus tag: DDA3937_RS01815
old locus tag: Dda3937_01261
EC number: 4.4.1.13
function: 1.5.1.9 metabolism; building block biosynthesis; amino acids; methionine
function: 7.1 location of gene products; cytoplasm
function: 1.5.1.12 metabolism; building block biosynthesis; amino acids; cysteine
function: 1.8.2 metabolism; metabolism of other compounds; sulfur metabolism
function: 1.8.3 metabolism; metabolism of other compounds; nitrogen metabolism
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883088.1
GO function: GO:0004121 - cystathionine beta-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0006520 - amino acid metabolic process [Evidence IEA]; GO:0019346 - transsulfuration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cystathionine beta-lyase
translation: MTSKKIATALVAAGRSKRVTQGAVNPVIQRASSLVFDSVQDKKHATINRAKGALFYGRRGTLTHFAFQDAMTELEGGAGCALYPCGAAAIANAIVSFVSAGDHLLVTGSAYEPTQDFCNKVLSKMNISTTFFDPMIGGDIASLIQPNTRVVFLESPGSITMEVQDVPAIVAAVRRVNPDIVIMIDNTWAAGVLFRPLDLGVDISIQAGTKYIVGHSDAMIGTAVANARCWDQLREQSYLMGQMADADSAYMASRGLRTLGVRLQQHQENGLRVARWLAERPEVAIVNHPALPGCKGHEYFVRDFSGSNGLFSFVLKDKLSREQLAHYLDHFSHFRMAYSWGGFESLILANQPEELAAIRPAGGVDFTGTLVRLHIGLEDCDDLIADLETGFRRLREM
SIO_010081: DDA3937_RS01815
subclass of: SO_0000673
so part of: DDA3937_RS01815
location: complement(403106..404299)
location: region:403106-404299:-1
so has part: feature:403106-404299:-1:exon

WP_013316062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403106-404299:-1:exon

DDA3937_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: exbB
locus tag: DDA3937_RS01820
old locus tag: Dda3937_01262
so part of: sequence
location: 404562..405500
location: region:404562-405500:1
so has part: feature:404562-405500:1:exon
subclass of: SO_0000010

23677387
type: Gene
SIO_000068: ncbigene

position:404562:1
position: 404562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405500:1
position: 405500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404562-405500:1:exon

DDA3937_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: exbB
locus tag: DDA3937_RS01820
old locus tag: Dda3937_01262
EC number: 3.1.2.-
function: 4.2.C.1 transport; Electrochemical potential driven transporters; Ion-gradient-driven energizers; TonB Family of Auxiliary proteins for Energization of OMR-mediated Transport
function: 4.S.28 transport; substrate; cation
function: 5.5.7 cell processes; adaptation to stress; Fe aquisition
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883089.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tol-pal system-associated acyl-CoA thioesterase
translation: MYTADKNINQRGSSVWRKPGRVFGGFTQRLMAFALLGMAGSALAAPASTPIATGTAAATTAAPSAPPGAVGSLMSTDLSVWGMYQHADVVVKTVMIGLLLASVVTWAIFFGKSTSLMGAKKRIRREYQALEDARTLDDALDISGVFKPGSVSLQLLADARNEQELSERSDDNNGIKERTAFRFERRVAATGRQMGRGTGYLATVGAIAPFIGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARWTAGYKAMVGDVAAQILLLQSRDLDIAASAGNASSSPAQKLRVG
SIO_010081: DDA3937_RS01820
subclass of: SO_0000673
so part of: DDA3937_RS01820
location: 404562..405500
location: region:404562-405500:1
so has part: feature:404562-405500:1:exon

WP_013316064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404562-405500:1:exon

DDA3937_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: exbD
locus tag: DDA3937_RS01825
old locus tag: Dda3937_01263
so part of: sequence
location: 405505..405924
location: region:405505-405924:1
so has part: feature:405505-405924:1:exon
subclass of: SO_0000010

9731768
type: Gene
SIO_000068: ncbigene

position:405505:1
position: 405505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405924:1
position: 405924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405505-405924:1:exon

DDA3937_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: exbD
locus tag: DDA3937_RS01825
old locus tag: Dda3937_01263
function: 4.2.C.1 transport; Electrochemical potential driven transporters; Ion-gradient-driven energizers; TonB Family of Auxiliary proteins for Energization of OMR-mediated Transport
function: 5.5.7 cell processes; adaptation to stress; Fe aquisition
function: 4.S.51 transport; substrate; enterochelin
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 4.S.53 transport; substrate; Fe
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848069.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB system transport protein ExbD
translation: MAMHLNDGQSENGEMHDINVTPFIDVMLVLLIIFMVAAPLATVDVRVNLPASSATPQPRPEKPVFLTVKADKQLYLGDDAITEATLAQALEAKTLGNKDTTIFFQADKSVDYETLMRVMDSLRETGYLKIGLMGAEKAR
SIO_010081: DDA3937_RS01825
subclass of: SO_0000673
so part of: DDA3937_RS01825
location: 405505..405924
location: region:405505-405924:1
so has part: feature:405505-405924:1:exon

WP_013316065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405505-405924:1:exon

DDA3937_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01830
old locus tag: Dda3937_01264
so part of: sequence
location: complement(406055..406705)
location: region:406055-406705:-1
so has part: feature:406055-406705:-1:exon
subclass of: SO_0000010

9731769
type: Gene
SIO_000068: ncbigene

position:406055:-1
position: 406055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406705:-1
position: 406705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406055-406705:-1:exon

DDA3937_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01830
old locus tag: Dda3937_01264
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014333431.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Qnr family pentapeptide repeat protein
translation: MNAQTFTEQKFSADRFTQQLVENCKFHNCDFAGCDLTDTQFLNCQFFDQESQMGCNFYRATLKDASFKNCDLSLCNFRSVKALGIEIRDCRAQGADFRDASFMNRITARTWFCSAYITKSNLSYANLSGVILEKCELWENRWTGANVNGASFVGSDLSGGEFNAFDWRSADVTQCDLINAELGELDVRSTNLEGVKLDSHQINTLMERLGIIVIEQ
SIO_010081: DDA3937_RS01830
subclass of: SO_0000673
so part of: DDA3937_RS01830
location: complement(406055..406705)
location: region:406055-406705:-1
so has part: feature:406055-406705:-1:exon

WP_033111543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406055-406705:-1:exon

DDA3937_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01835
old locus tag: Dda3937_01265
so part of: sequence
location: complement(406834..407853)
location: region:406834-407853:-1
so has part: feature:406834-407853:-1:exon
subclass of: SO_0000010

9731770
type: Gene
SIO_000068: ncbigene

position:406834:-1
position: 406834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407853:-1
position: 407853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406834-407853:-1:exon

DDA3937_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01835
old locus tag: Dda3937_01265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091990.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LacI family DNA-binding transcriptional regulator
translation: MKQTKRVTISDIARLAGVSKSTASLVLNGRSKEFRVSDETRDRVLALAQQQRYQPSIHARSLRSSRSNTLGLVVPEMTNYGFAMISRELECLCREAGLQLLIACTDENASQEMMAVNSLIQRQVDGLIVASSMLSDVEYQKINQQLPVLQFDRVIGESNLPMVVSEAVESTAALVENIARRHPDEFYFIGGQPRISPTRDRLAGFQLGLERAGVECRPEWIIHGNYHSSAGYEMFAQLCARLGRPPKALFTAACGLLEGVLRYLNQHNLMDCDMRLCSFDDHYLFDCLPMKIDTVAQDCETLARNSFEMINALIEGQPLTESRVYVPTRPHWRHPDSRA
SIO_010081: DDA3937_RS01835
subclass of: SO_0000673
so part of: DDA3937_RS01835
location: complement(406834..407853)
location: region:406834-407853:-1
so has part: feature:406834-407853:-1:exon

WP_033112191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406834-407853:-1:exon

DDA3937_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01840
old locus tag: Dda3937_01266
so part of: sequence
location: complement(407903..409315)
location: region:407903-409315:-1
so has part: feature:407903-409315:-1:exon
subclass of: SO_0000010

9731771
type: Gene
SIO_000068: ncbigene

position:407903:-1
position: 407903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409315:-1
position: 409315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407903-409315:-1:exon

DDA3937_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01840
old locus tag: Dda3937_01266
EC number: 3.2.1.26
function: has sucrose hydrolase activity
function: 1.1.1 metabolism; carbon utilization; carbon compounds
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943055.1
GO function: GO:0004564 - beta-fructofuranosidase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sucrose-6-phosphate hydrolase
translation: MKEIHLLKRMAYALMSGPSRQTYDPHRPQWHLSPLVGLLNDPNGFVQHKGRYHLFYQWNPQACAHGAKFWGHWSSADLVHWRHEPVALVPAESYESHGCYSGSAVVDNDALALIYTGNVKYDDGSRTAYQCLARANGDGEFDKTGPVLSLPEGYTGHVRDPKVWRHQDNWYMVLGAQDMDLQGKVLLYRSSDLLQWHALGEIAGSRLNGLGDFGYMWECPDLFALENHDVLICCPQGLPAEEERYLNTHQSGYFIGSLDYDSGRFTHQAFHELDLGFEFYAPQTTQSEDGRRLLFGWMGVPDQNEFFQPTIVHGWIHTMTCPRELTLRDDRIYQQPVRELQSLRHLEHLWQGVADYAPALPASSAELVLDTQGEFQLNFAGVMVLCWDGERLTLSRRNRRTNESEHRYWHDGPLHHLQILCDRSSVEIFINHGQAVMSSRYFPTSDAMVSFSGSGRITLQHWLLAPCVIE
SIO_010081: DDA3937_RS01840
subclass of: SO_0000673
so part of: DDA3937_RS01840
location: complement(407903..409315)
location: region:407903-409315:-1
so has part: feature:407903-409315:-1:exon

WP_013316068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407903-409315:-1:exon

DDA3937_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01845
old locus tag: Dda3937_01267
so part of: sequence
location: complement(409315..410685)
location: region:409315-410685:-1
so has part: feature:409315-410685:-1:exon
subclass of: SO_0000010

9731772
type: Gene
SIO_000068: ncbigene

position:410685:-1
position: 410685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409315-410685:-1:exon

DDA3937_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01845
old locus tag: Dda3937_01267
EC number: 2.7.1.211
function: 4.4.A.1 transport; Group Translocators; Phosphotransferase Systems (PEP-dependent PTS); The PTS Glucose-Glucoside (Glc) Family
function: 1.7.9 metabolism; central intermediary metabolism; glucose metabolism
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
function: 4.S.172 transport; substrate; sucrose
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883093.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sucrose-specific PTS transporter subunit IIBC
translation: MDIHATAASLIPLLGGRENIASAAHCATRLRLVLNDDSLADKTAIENVEGVKGCFQNAGQMQIIFGSGLVNKVYAEFIKAAGISEASTSEAATLAAQKLNPLQRLARLLSNIFVPIIPAIVASGLLMGLLGMIKTYGWVDAGSAIFVMLDMFSSAAFIILPILIGFTAAREFGGNPYLGATLGGILTHPALTNAWGVAGGFKTMHLFGLEFAMIGYQGTVFPVLLAVWFMSLVEKRLRKVVPNALDIIVTPFLTVIISGFVAMLVIGPAGRMLGDGISLVLSTLITHAGWLAGLLFGGLYSAIVITGVHHSFHAIEAGLLGNPSIGVNFLLPIWAMANVAQGGACLAVYFKTRDAKIRAIAVPSSLSCLLGITEAAIFGINLRFIKPFLAGLAGGALGGAWVVANHVNMTAVGLTGIPGLAIVQAGSMLNYLLGMLIAFGAAFLISLLLKYKTDNA
SIO_010081: DDA3937_RS01845
subclass of: SO_0000673
so part of: DDA3937_RS01845
location: complement(409315..410685)
location: region:409315-410685:-1
so has part: feature:409315-410685:-1:exon

WP_013316069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409315-410685:-1:exon

DDA3937_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01850
old locus tag: Dda3937_01268
so part of: sequence
location: complement(410767..412383)
location: region:410767-412383:-1
so has part: feature:410767-412383:-1:exon
subclass of: SO_0000010

9731773
type: Gene
SIO_000068: ncbigene

position:410767:-1
position: 410767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412383:-1
position: 412383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410767-412383:-1:exon

DDA3937_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01850
old locus tag: Dda3937_01268
function: 4.1.B.3 transport; Channel-type Transporters; Beta barrel porins (The Outer Membrane Porin (OMP) Functional Superfamily); The sugar Porin (SP) Family
function: 6.1 cell structure; membrane
function: 7.4 location of gene products; outer membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883094.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate porin
translation: MIKPGYLAAAVGLALCTSQALAAPSDSIEARLNALEQRLLQAEQRLLQAEARADAAEKQAKQLAARTAQVEQKTQQVEQTTQQVAQQTQQVAARATQNEQQTQQVALKTDALTNKRSVADGFEFHGYARSGLAIHDSVTSSKANIGPSMTPAGETGGHVGRLGNEDDTYLELKLEHRTKLDNGATTRFKVMMADGQRSYNDWTASTSDLNVREAFVELGSLPTFTGAFKDTTLWAGKRFDRDNFDIHWIDSDVVFLAGTGGGIYDVKPVDGWKSNLSIYGRSLGEITSLDKEIQNYIVTSNNFVGPFQFMLSGLRARNNDIKENTGSNNANNVTNTNAGDSGYHALAAWHGDSFYGLRDGTAKVALLYGHGLGGEVKSIGSDGNLTQNANTWRLATYGTTALNKTWSFAPAILAQSSKDRYVQGDDYRWVTFNARFIQEITENFALAYEGSYQYMNLDPQGYLSRNQVSGGFYKLTFAPTFKVGDISNLLSRPELRIFASYMDWDKRLDNYASDDAFGSTGFKAGGEWTFGVQMETWF
SIO_010081: DDA3937_RS01850
subclass of: SO_0000673
so part of: DDA3937_RS01850
location: complement(410767..412383)
location: region:410767-412383:-1
so has part: feature:410767-412383:-1:exon

WP_013316070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410767-412383:-1:exon

DDA3937_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01855
old locus tag: Dda3937_01269
so part of: sequence
location: complement(412577..413500)
location: region:412577-413500:-1
so has part: feature:412577-413500:-1:exon
subclass of: SO_0000010

9731774
type: Gene
SIO_000068: ncbigene

position:412577:-1
position: 412577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413500:-1
position: 413500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412577-413500:-1:exon

DDA3937_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01855
old locus tag: Dda3937_01269
function: 1.1.1 metabolism; carbon utilization; carbon compounds
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848064.1
GO function: GO:0016301 - kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoimidazole riboside kinase
translation: MSHKVWVMGDAVVDLIPEGEERYLKCPGGAPANVAVGVARLGGHSGFIGRVGEDAFGHFLRDVLAREQVDIRHMQPDAEHRTSTVVVSLDAQGERTFTFMVRPSADLFLQPSDLPAFQRSEWLHLCSIALSREPSRSTALEAIQRIRAAQGWVSFDPNIRADLWRSEQELRTSLDQVLALADVVKLSEEEFLFLSGSEDIRQGSANLMARYPIKRLLITQGGDGVWLHDGHQLRHFLAHRVTPVDTTGAGDAFVAGMLAALAGYDSLYQIDDWHSVLTQAQRCGALATTAKGAMTALPFAHQLTTAS
SIO_010081: DDA3937_RS01855
subclass of: SO_0000673
so part of: DDA3937_RS01855
location: complement(412577..413500)
location: region:412577-413500:-1
so has part: feature:412577-413500:-1:exon

WP_013316071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412577-413500:-1:exon

DDA3937_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: casA
locus tag: DDA3937_RS01860
old locus tag: Dda3937_01270
so part of: sequence
location: 414296..415804
location: region:414296-415804:1
so has part: feature:414296-415804:1:exon
subclass of: SO_0000010

9731775
type: Gene
SIO_000068: ncbigene

position:414296:1
position: 414296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415804:1
position: 415804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414296-415804:1:exon

DDA3937_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: casA
locus tag: DDA3937_RS01860
old locus tag: Dda3937_01270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848063.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-E CRISPR-associated protein Cse1/CasA
translation: MFSLIDTPWLPVVGADGHRTRISPRQLVNDDIIDLACPRPDLQGAAWQLLIGLLQTAYSPPDDDAWEDIWHGGLGKGWAKALTPLAPALWFGAKAKKPAFMQYGVGPAGKVRPIADLLVNAAGEQPLTFNRQHVLTHGPVEAICPHCAVLALYARQSHAPSGRRSVHAAAPAMKTLLTLQDHRQPLWRKLWANVIPGVHGHCVSEVFPWLASSGIHDEAVTPESIAPLQSFWEMPLRIELDFAHTQTGHCELCGEASEHLLTHFRGDVRAARHEHREHPLTPYRQSVQDGSLLPVAGQLQGLAYREWPGLVLGEQGGEYHTLPARAVQLNHQRDPLRCKVGLWCFGYDLAEGKGGWYEHHIPTWGEVTPAILDYLPLAVQMADDAHSLLCQSVQAAGVGADKHCCTIDVTFWQETEQFFKRLYDAIAGGMSVAEALKAWQNQLYLYLIGTFDRLTFGNPDLRCDLNLAVEARSNMVNRFCSQKTAVQIEKMQPQETLAAANS
SIO_010081: DDA3937_RS01860
subclass of: SO_0000673
so part of: DDA3937_RS01860
location: 414296..415804
location: region:414296-415804:1
so has part: feature:414296-415804:1:exon

WP_013316072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414296-415804:1:exon

DDA3937_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01865
old locus tag: Dda3937_01271
so part of: sequence
location: 416190..416642
location: region:416190-416642:1
so has part: feature:416190-416642:1:exon
subclass of: SO_0000010

9731777
type: Gene
SIO_000068: ncbigene

position:416190:1
position: 416190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416642:1
position: 416642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416190-416642:1:exon

DDA3937_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01865
old locus tag: Dda3937_01271
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848060.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YhbP family protein
translation: MEAENTLGVISRYLKKLHVLTLCVSDDDDLWCANCFYVFDDEQIAFYLMTEPDTRHGEIMRRCPQVAGTVNGQPKSVLLIKGVQFLGEISRLTGDEETQARSRYNVRFPIARSSGAPIWKLSLNEMKMTDNALGFGKKHLWRRDTVAEPM
SIO_010081: DDA3937_RS01865
subclass of: SO_0000673
so part of: DDA3937_RS01865
location: 416190..416642
location: region:416190-416642:1
so has part: feature:416190-416642:1:exon

WP_013316074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416190-416642:1:exon

DDA3937_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: nrdG
locus tag: DDA3937_RS01870
old locus tag: Dda3937_01272
so part of: sequence
location: complement(416751..417215)
location: region:416751-417215:-1
so has part: feature:416751-417215:-1:exon
subclass of: SO_0000010

9731778
type: Gene
SIO_000068: ncbigene

position:416751:-1
position: 416751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417215:-1
position: 417215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416751-417215:-1:exon

DDA3937_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: nrdG
locus tag: DDA3937_RS01870
old locus tag: Dda3937_01272
EC number: 1.97.1.-
function: 1.7.33 metabolism; central intermediary metabolism; nucleotide and nucleoside conversions
function: 2.3.3 information transfer; protein related; posttranslational modification
function: 3.1.3.3 regulation; type of regulation; posttranscriptional; inhibition / activation of enzymes
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005224790.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anaerobic ribonucleoside-triphosphate reductase-activating protein
translation: MNYHQYYPVDVVNGPGTRCTLFVAGCEHQCPGCYNQSTWRVNSGHPFTQEMEDRIIADLQNTDIPLQGLSLSGGDPLHPQNVPEVLRLVKRVHDECPGKNIWMWTGYRLDELTPEQREVVDLINVLVDGRFVQEQRDLTLMWRGSRNQVIHHLR
SIO_010081: DDA3937_RS01870
subclass of: SO_0000673
so part of: DDA3937_RS01870
location: complement(416751..417215)
location: region:416751-417215:-1
so has part: feature:416751-417215:-1:exon

WP_013316075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416751-417215:-1:exon

DDA3937_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: nrdD
locus tag: DDA3937_RS01875
old locus tag: Dda3937_01273
so part of: sequence
location: complement(417315..419453)
location: region:417315-419453:-1
so has part: feature:417315-419453:-1:exon
subclass of: SO_0000010

9731779
type: Gene
SIO_000068: ncbigene

position:417315:-1
position: 417315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419453:-1
position: 419453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417315-419453:-1:exon

DDA3937_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: nrdD
locus tag: DDA3937_RS01875
old locus tag: Dda3937_01273
EC number: 1.17.4.2
function: 1.7.15 metabolism; central intermediary metabolism; 2'-deoxyribonucleotide metabolism
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:NP_313242.1
GO function: GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anaerobic ribonucleoside-triphosphate reductase
translation: MKPVVIKRDGCQVPFDENRINDAVIKAAKAAGVDDADYCATVAGAVAQQMQGKTRVDIREIQNVVENLLMSGKYKQLARTYIEYRHDRDVARERQGRLNQEIRGLVEQSNVALLNENANKDSKVIPTQRDLLAGIVAKHYAKQHILPRDVVLAHERGEIHYHDLDYSPFFPMFNCMLIDLNGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEILAPFVTASHEKHCAVAREWHIPDADGYALSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWQSRLIQQSILRNRIAGLGKNHKTAVFPKLVFAIRDGVNHKPGDANYDIKQLALECASKRMYPDILNYDQVVEVTGSFKTPMGCRSFLGIYEENGEQIHDGRNNLGVISLNLPRIALEAHGDEARFWQLLDQRLLLAKKALMTRIARLENVKARVAPILYMEGACGVRLKADDNIAEIFKNGRASISLGYIGVHETINALFSNQVHVFDDETLRQKAVAIVARLKAATESWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTEKGYYTNSFHLDVEKKVNPYQKIDFEAPYPPLANGGFICYGEYPNLQHNLRALEDVWDYSYTRVPYYGTNTPIDECYECGFNGEFDCTSKGFTCPQCGNHDSSRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLASGQLG
SIO_010081: DDA3937_RS01875
subclass of: SO_0000673
so part of: DDA3937_RS01875
location: complement(417315..419453)
location: region:417315-419453:-1
so has part: feature:417315-419453:-1:exon

WP_013316076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417315-419453:-1:exon

DDA3937_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01880
old locus tag: Dda3937_01274
so part of: sequence
location: 419848..420756
location: region:419848-420756:1
so has part: feature:419848-420756:1:exon
subclass of: SO_0000010

9731780
type: Gene
SIO_000068: ncbigene

position:419848:1
position: 419848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420756:1
position: 420756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419848-420756:1:exon

DDA3937_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01880
old locus tag: Dda3937_01274
function: 1.7.6 metabolism; central intermediary metabolism; glycerol metabolism
function: 1.5.1.9 metabolism; building block biosynthesis; amino acids; methionine
function: 8.1 extrachromosomal; prophage genes and phage related functions
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943037.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homocysteine S-methyltransferase family protein
translation: MADNVLILDGGMGRELARIGAPFRQPEWSALALMESPQHVRQVHDSYIAAGAQVITTNSYAVVPFHISDAVFNARGQALATLAGQLARQAADAAAHPVRVAGSLPPVLGSYRPDLFNAAAATPILKTLIDALNPYVDVWLAETQSSLAEVALVRELLANDARELWLSFTLQDELDADGHARLRSGETVAAAAQAAIQLRAANLLFNCSRPEVMAPAVAQASATLKAQSAAIGVGVYANAFEPEDNQRGANEGLSRLRTDTHPEGYLQWSQEWVAQGASLVGGCCGIGPEHIARLAQAFHRQG
SIO_010081: DDA3937_RS01880
subclass of: SO_0000673
so part of: DDA3937_RS01880
location: 419848..420756
location: region:419848-420756:1
so has part: feature:419848-420756:1:exon

WP_013316077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419848-420756:1:exon

DDA3937_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01885
old locus tag: Dda3937_01275
so part of: sequence
location: 420830..422371
location: region:420830-422371:1
so has part: feature:420830-422371:1:exon
subclass of: SO_0000010

9731781
type: Gene
SIO_000068: ncbigene

position:420830:1
position: 420830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422371:1
position: 422371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420830-422371:1:exon

DDA3937_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01885
old locus tag: Dda3937_01275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014543687.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MNRRHFIKSACALSVAAAATGWPLSAAWGADAAEKPKKGGHLIVGVDNASSTDRLDPAFWFETYMYFVGSQLFNNLLELDEKGELAPSLAESWDSKDGGRTWVLHIRKGVQFHDGRTLGAKDVIYSLNHHRGEKSSSSVKGYLDPVIAMDATGSHEVTIRLSEPNVEFVALLSDVHFAITAENESFDKGIGTGAFILESFQPGVRTLVKRNPNHWNSERGHVDSVETLAMNDSTARVAALVSGSAHIINRVNPRIVGRIQNMPTLQLLRSRDSQIFTFPGLGNVAPFNNEDGRLALKYAIDRQQIIDTVLGGYASVANDNPIFPSNRYFAKDIPQRPYDPEKAKWHWQKAGFSGPLTLSVADAGFPGAVDAGQLYQASAQKAGIPLNVERVPDDAFWDNVWMKKPFVSSNWSVRPTADALLSLVFTSQAPWNESAWKDAGFDQLVQAARGEVNEDKRRQIYHDIQVMLVDKGSEIIPLYADALDACSNKVKGLSAIPGFPLSGNRAAEKVWLA
SIO_010081: DDA3937_RS01885
subclass of: SO_0000673
so part of: DDA3937_RS01885
location: 420830..422371
location: region:420830-422371:1
so has part: feature:420830-422371:1:exon

WP_033111544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420830-422371:1:exon

DDA3937_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01890
old locus tag: Dda3937_01276
so part of: sequence
location: 422460..423404
location: region:422460-423404:1
so has part: feature:422460-423404:1:exon
subclass of: SO_0000010

9731782
type: Gene
SIO_000068: ncbigene

position:422460:1
position: 422460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423404:1
position: 423404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422460-423404:1:exon

DDA3937_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01890
old locus tag: Dda3937_01276
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843623.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MLILRRLLAGVAMIAVVSVLIFAGIQLLPGNAATAILGQTATPEAVRALNAQLGLDQPAVSRYLSWLWGVLGGDFGQSFTSRQSIAPVLAYRLENTLFLAGCTAVIAVPLALLIGFLSVRYQGSWLDRLLNLFTRVAVALPEFFSGYLLILIFSITLFWLPSNSNVSDNMPLGAHLTAIALPCMTLVLAVLGHMSNMTRAALIGAQNAAYVDTALLKGMSPSAILLRHVLPNAWGPIINVIVLNLAYLMVGVVIVESVFVYPGLGQYMVDSISKRDMPVIQGCALVLATIYILLNLLADVVSLMANPRLRHARR
SIO_010081: DDA3937_RS01890
subclass of: SO_0000673
so part of: DDA3937_RS01890
location: 422460..423404
location: region:422460-423404:1
so has part: feature:422460-423404:1:exon

WP_042318034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422460-423404:1:exon

DDA3937_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01895
old locus tag: Dda3937_01277
so part of: sequence
location: 423432..424247
location: region:423432-424247:1
so has part: feature:423432-424247:1:exon
subclass of: SO_0000010

9731783
type: Gene
SIO_000068: ncbigene

position:423432:1
position: 423432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424247:1
position: 424247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423432-424247:1:exon

DDA3937_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01895
old locus tag: Dda3937_01277
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013316080.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MPAVKPSVVLGLLGLSLFIGVALLAPWIAPYSADKVVGGAWLGPMPQAWLGTDNIGRDLFSRLIWGTRTSLVVTALAALLAFVLGTGLGFLAGVCGGWVDQLISRVNDVLMAIPTLILALVVLAMLPKSTVIIILVLGVLEATRVLRVSRALAVDIATQEFIEVARLRGESMGWILWREILPNARNTLVAEFALRFIFILLFLSALSFLGLGIQPPTADWGGLARDNKDGILFGVWAALVPGAAIALLAVSLNVVADWLLSRDGRNWRRPS
SIO_010081: DDA3937_RS01895
subclass of: SO_0000673
so part of: DDA3937_RS01895
location: 423432..424247
location: region:423432-424247:1
so has part: feature:423432-424247:1:exon

WP_013316080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423432-424247:1:exon

DDA3937_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01900
old locus tag: Dda3937_01278
so part of: sequence
location: 424244..425851
location: region:424244-425851:1
so has part: feature:424244-425851:1:exon
subclass of: SO_0000010

9731784
type: Gene
SIO_000068: ncbigene

position:424244:1
position: 424244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425851:1
position: 425851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424244-425851:1:exon

DDA3937_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01900
old locus tag: Dda3937_01278
function: 4.3.A.1.a transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP binding cytoplasmic component
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013316081.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSELLRVERLCVTAGGRALVQDIDFTLNKGEVLGLIGESGAGKSTIGQAILGHCRHGMRIESGHIWFQNDDKNSDLAALSERQLRRVRGTRIAYVAQSASASFNPAQRIGEQVIETAVRHGVLSRQQAIARAIELFTQLSLPEPQTFFQRYPHQVSGGQLQRAMIAMAMCAGPDLIIFDEPTTALDVTTQLGVLNAIDEIIRLTGVAALYISHDLAVVAQISHRIMVLRHGRQVEIGDTASLLDNPTETYTRELLQARGESKVPQPTTDDILLDIRHLGARYQQQPVLQDVSLQLARGRTLAVIGESGSGKSTLGRTLCGLLAPAGGEIRLNGDALPPKLAQRNRAQLQSIQMIHQHPDTALNPRLPVGVQIERAMVCLTQLDATARRLRVSDLLHQVGLPAEMAQRYPTALSGGQKQRVCIARALAAQPSLIVCDEPTSALDPLVARDVLALLRLIQQETGVAYLFITHDLHVVREVADTVAVLRHGHIVRQGPVTEALSPPLDDYTQQLLLAVPEMRCDWLRDVMARERSALS
SIO_010081: DDA3937_RS01900
subclass of: SO_0000673
so part of: DDA3937_RS01900
location: 424244..425851
location: region:424244-425851:1
so has part: feature:424244-425851:1:exon

WP_013316081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424244-425851:1:exon

DDA3937_RS23545
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23545
pseudo: true
so part of: sequence
location: complement(425954..>426037)
location: region:425954-426037:-1
so has part: feature:425954-426037:-1:exon
subclass of: SO_0000010

70537604
type: Gene
SIO_000068: ncbigene

position:425954:-1
position: 425954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426037:-1
position: 426037
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425954-426037:-1:exon

DDA3937_RS23545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883115.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: peptidase
SIO_010081: DDA3937_RS23545
subclass of: SO_0000673
so part of: DDA3937_RS23545
location: complement(425954..>426037)
location: region:425954-426037:-1
so has part: feature:425954-426037:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425954-426037:-1:exon

DDA3937_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01905
old locus tag: Dda3937_01279
so part of: sequence
location: 426358..428049
location: region:426358-428049:1
so has part: feature:426358-428049:1:exon
subclass of: SO_0000010

9731785
type: Gene
SIO_000068: ncbigene

position:426358:1
position: 426358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428049:1
position: 428049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426358-428049:1:exon

DDA3937_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01905
old locus tag: Dda3937_01279
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848052.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MSNDASFLANSVPCVDLLYDYAPFLQCSEAEGRIGYFPPGIPTPRVAIIGAGISGLVAATELLRAGVKDITLFEARDRRIGGRVWSQTFDPRYPHLIAEMGAMRFPSSETCLFYYLNKLDIATTTSFPDPGVVDTELHYRGVRHIWSAGDPPPSLFSRVHEGWVALLNEGYLHNGVPLVAPRDITAMLKSHCFDKARKAWQAWLDAFRDYSFYSALVTMFTSNTPPGGVPWRRPDDFELFGSLGIGSGGFLPVYQAGFTEILRLVINGYEDDQRLIIGGISTLAERLVSQKIGDTRLSEHICFNEVKRIYKEDGEIKLVSGKGQTHTFDRVIVTSSTRTMQIVHCLTGDETFLEHDISRAVKETHLTGSSKLFMLTRNKFWLNDSLPVTIQSDGFIRGVYCLDYEPDNPDGPGVVLLSYTWEDDAHKLLSIPDKKQRCQYLVDDLAKINPEFARHLIPADGDYERYVLHHDWLVDPYSAGAFKLNYPGEDVYSQRLFFQFKNANTPEKDTGLYLAGCGCSFTGGWIEGAMQTALNSACAVIRSSGGALLVGNPLDDMHSAYCY
SIO_010081: DDA3937_RS01905
subclass of: SO_0000673
so part of: DDA3937_RS01905
location: 426358..428049
location: region:426358-428049:1
so has part: feature:426358-428049:1:exon

WP_033111545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426358-428049:1:exon

DDA3937_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01910
old locus tag: Dda3937_01280
so part of: sequence
location: 428150..429490
location: region:428150-429490:1
so has part: feature:428150-429490:1:exon
subclass of: SO_0000010

9731786
type: Gene
SIO_000068: ncbigene

position:428150:1
position: 428150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429490:1
position: 429490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428150-429490:1:exon

DDA3937_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01910
old locus tag: Dda3937_01280
function: 1.5.1.15 metabolism; building block biosynthesis; amino acids; tryptophan
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848051.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidase family protein
translation: MYSEYTLESLCSDLRRGIVSAADIRQQALNAEAQQRHLNCFIRIDDAEEQFEKVKDVHKGGPLYGIPVSFKDNICVAGLPVTVGTQGMADCIATHDAAIVRKLKSLGAVVAGKNNMNELCFGVTSCEPYWGAVENPSAPGYSIGGSSSGCAAAVAAGIVPVAIGTDTGGSARIPASFCGITGFRPTSGHWSSSGIIPVSHTKDSPGLITRTASDAHFLYTHLSSDDVSPTEQGHFPCRIGLPLSMWSELDDDVMTHCRYAINQLILAGFECVDVDDAAVFSLNQTITFTLPIYEFFIDFPRTLLSLGWENRIATVFDNISDKNVHKIIQEHLVGGRISPADYVSVVRNIGRLRLDMDTLFSTYGVDMLVYPTVPRQVPHLSQTGRPELFAELIRNTDLASNAAMPSITLPVAPEGALPVGLSFDALRGRDRYLLGMATRIETIIKP
SIO_010081: DDA3937_RS01910
subclass of: SO_0000673
so part of: DDA3937_RS01910
location: 428150..429490
location: region:428150-429490:1
so has part: feature:428150-429490:1:exon

WP_013316083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428150-429490:1:exon

DDA3937_RS23395
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23395
old locus tag: Dda3937_01281
so part of: sequence
location: 430044..430799
location: region:430044-430799:1
so has part: feature:430044-430799:1:exon
subclass of: SO_0000010

56705088
type: Gene
SIO_000068: ncbigene

position:430044:1
position: 430044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430799:1
position: 430799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430044-430799:1:exon

DDA3937_RS23395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23395
old locus tag: Dda3937_01281
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLETSCLSPEASRWLVKFVPDEFVTQLPRYKAHYEPCPDGPTRCVVQHAMRVVLQLELFWVYESFNLLGFFLLNLSDCYCMLYYDYINFRKYCLHDFISLLNFNLRIIGMYHHLFDYSPFSYEVNDMKKLHNIIVFFSLSMLLDVTSSFSNNNEFGPLSSPIYLQNNSTNFCARVYYTKNDNQYGQTDVLPKDKRQFYPLKLNSTVSVTVFPSRKCGGKGIYFSTYPVSQEVKGAKSYTLITVDDKGIHL
SIO_010081: DDA3937_RS23395
subclass of: SO_0000673
so part of: DDA3937_RS23395
location: 430044..430799
location: region:430044-430799:1
so has part: feature:430044-430799:1:exon

WP_158305113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430044-430799:1:exon

DDA3937_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ridA
locus tag: DDA3937_RS01915
old locus tag: Dda3937_01282
so part of: sequence
location: complement(431010..431396)
location: region:431010-431396:-1
so has part: feature:431010-431396:-1:exon
subclass of: SO_0000010

9731788
type: Gene
SIO_000068: ncbigene

position:431010:-1
position: 431010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431396:-1
position: 431396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431010-431396:-1:exon

DDA3937_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: ridA
locus tag: DDA3937_RS01915
old locus tag: Dda3937_01282
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855227.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-iminobutanoate/2-iminopropanoate deaminase
translation: MSRIISTEQAPAAIGPYVQGVDLGSMIITSGQIPVDPKTGLVPDDVTAQARQSLENVKAIVEAAGLKVSNIVKTTVFVKDLNDFATVNAAYEAFFTEHNAPFPARSCVEVARLPKDVKIEIEAIAVRG
SIO_010081: DDA3937_RS01915
subclass of: SO_0000673
so part of: DDA3937_RS01915
location: complement(431010..431396)
location: region:431010-431396:-1
so has part: feature:431010-431396:-1:exon

WP_013316085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431010-431396:-1:exon

DDA3937_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: pyrI
locus tag: DDA3937_RS01920
old locus tag: Dda3937_01283
so part of: sequence
location: complement(431509..431973)
location: region:431509-431973:-1
so has part: feature:431509-431973:-1:exon
subclass of: SO_0000010

9731789
type: Gene
SIO_000068: ncbigene

position:431509:-1
position: 431509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431973:-1
position: 431973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431509-431973:-1:exon

DDA3937_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: pyrI
locus tag: DDA3937_RS01920
old locus tag: Dda3937_01283
EC number: 2.1.3.2
function: 1.5.2.2 metabolism; building block biosynthesis; nucleotide; pyrimidine biosynthesis
function: 3.1.3.3 regulation; type of regulation; posttranscriptional; inhibition / activation of enzymes
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883122.1
GO function: GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate carbamoyltransferase regulatory subunit
translation: MTHDNKLQVEAIKRGTVIDHIPAQVGFKLLTLFKLTATDQRITIGLNLPSNHLGRKDLIKIENIFLTEEQANQLAMYAPQATVNQIDNYEVVRKLHPQLPSHIEGVLTCPNSNCISRSEPVSSSFGVKQRGDDVQLKCKYCEKEFERQAVLNSY
SIO_010081: DDA3937_RS01920
subclass of: SO_0000673
so part of: DDA3937_RS01920
location: complement(431509..431973)
location: region:431509-431973:-1
so has part: feature:431509-431973:-1:exon

WP_013316086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431509-431973:-1:exon

DDA3937_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: pyrB
locus tag: DDA3937_RS01925
old locus tag: Dda3937_01284
so part of: sequence
location: complement(431990..432925)
location: region:431990-432925:-1
so has part: feature:431990-432925:-1:exon
subclass of: SO_0000010

9731790
type: Gene
SIO_000068: ncbigene

position:431990:-1
position: 431990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432925:-1
position: 432925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431990-432925:-1:exon

DDA3937_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: pyrB
locus tag: DDA3937_RS01925
old locus tag: Dda3937_01284
EC number: 2.1.3.2
function: 1.5.2.2 metabolism; building block biosynthesis; nucleotide; pyrimidine biosynthesis
function: 1.5.2.4 metabolism; building block biosynthesis; nucleotide; pyrimidine ribonucleotide biosynthesis
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011092012.1
GO function: GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate carbamoyltransferase
translation: MVNPLYKRHIISINDLSRDDLELTLKVAASLKAHPQPELLKHKVIASCFFEASTRTRLSFETAIHRLGASVVGFADSNNTSLGKKGETLADTISVISNYVDAIVMRHPQEGAARLATEFSGGVPVFNAGDGANQHPSQTLLDLFTIQETQGRLNNINIAMVGDLKYGRTVHSLTQALAKFDGNRFYFISPDALAMPDYILNMLQEKNIPYSLHTSIEEVVPQLDILYMTRVQKERLDPSEYINIKSQFILRAADLGSARDNLKVLHPLPRIDEITTDVDSTPYAYYFQQAGNGIYARQALLALVLNSELVL
SIO_010081: DDA3937_RS01925
subclass of: SO_0000673
so part of: DDA3937_RS01925
location: complement(431990..432925)
location: region:431990-432925:-1
so has part: feature:431990-432925:-1:exon

WP_013316087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431990-432925:-1:exon

DDA3937_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01930
old locus tag: Dda3937_04450
so part of: sequence
location: 433337..433804
location: region:433337-433804:1
so has part: feature:433337-433804:1:exon
subclass of: SO_0000010

9731792
type: Gene
SIO_000068: ncbigene

position:433337:1
position: 433337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433804:1
position: 433804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433337-433804:1:exon

DDA3937_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01930
old locus tag: Dda3937_04450
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010298260.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YhcH/YjgK/YiaL family protein
translation: MIIGNVDHLELVPYLPAKLREAIEYVKQHINADTPLGKHDIDGNKVFVLVSNDSTEPFEKRRAEYHAKYLDIQIVLNGTEGMTFSNLPAGKPDVDWLADKDIAFLPAGEQEKQVILQTGDFVVFFPGEVHKPLCAVGEPAHVRKAVVKIDATLVL
SIO_010081: DDA3937_RS01930
subclass of: SO_0000673
so part of: DDA3937_RS01930
location: 433337..433804
location: region:433337-433804:1
so has part: feature:433337-433804:1:exon

WP_013316089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433337-433804:1:exon

DDA3937_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01935
old locus tag: Dda3937_01286
so part of: sequence
location: 434025..435461
location: region:434025-435461:1
so has part: feature:434025-435461:1:exon
subclass of: SO_0000010

9731794
type: Gene
SIO_000068: ncbigene

position:434025:1
position: 434025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435461:1
position: 435461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434025-435461:1:exon

DDA3937_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01935
old locus tag: Dda3937_01286
EC number: 3.2.1.86
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883125.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-phospho-beta-glucosidase
translation: MSQLPAGFLWGGAVAAHQLEGGWNEGGKGISVVDVLTAGAHGKLRRITDGVIPGESYPNHEAIDFYHRYKDDIALFAEMGFKCFRTSIAWTRIFPNGDEAEPCEAGLKFYDDLIDELLKHGIEPVLTLSHFEMPLHLVQQYDGWMSRKTLDCFVHFAATVIARYQHKVKYWMTFNEINNQKNVSAEIFGWMCSGVKFPQKAKPEEAMYQAVHHQFVASALIVKKAHDINPDIKVGCMCAFLPYYPYSCHPEDVMLAAQAMHDRFYFTDVQVRGHYPAYARREWALKGYQIHMEPEDERILREGKADYIGFSYYMSNVVKHDVQNRIDASMDGSSEHSIPNPHLKASDWGWQIDPTGLRYALTTLYERYEVPLFIVENGLGAVDKPDANGMCQDDYRIDYLRSHIDAMKAAVWEDGVDLMGYTPWGCIDLVSFTTGEMAKRYGFIHVDKHDDGTGTLARTPKKSFHWYQRVIASNGEEL
SIO_010081: DDA3937_RS01935
subclass of: SO_0000673
so part of: DDA3937_RS01935
location: 434025..435461
location: region:434025-435461:1
so has part: feature:434025-435461:1:exon

WP_033111546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434025-435461:1:exon

DDA3937_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: argF
locus tag: DDA3937_RS01940
old locus tag: Dda3937_01287
so part of: sequence
location: complement(435556..436572)
location: region:435556-436572:-1
so has part: feature:435556-436572:-1:exon
subclass of: SO_0000010

9731795
type: Gene
SIO_000068: ncbigene

position:435556:-1
position: 435556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436572:-1
position: 436572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435556-436572:-1:exon

DDA3937_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: argF
locus tag: DDA3937_RS01940
old locus tag: Dda3937_01287
EC number: 2.1.3.3
function: 1.5.1.3 metabolism; building block biosynthesis; amino acids; arginine
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848046.1
GO function: GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO process: GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ornithine carbamoyltransferase
translation: MNPFYKRHFLRLMDFTPAEISSLLTLAATLKTNKKNGAEIRHLQGKNIALIFEKDSTRTRCSFEVAAYDQGAQVTYLGPSGSQIGHKESMKDTARVLGRMYDGIQYRGYGQVLVETLAEFSGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKSLSGMALAYVGDTRNNMGNSMLEAAAITGLDLRLIAPKACWPDAGLVAECQAAAAKTGGSITLTEDVAAGVNGVDFIYTDVWVSMGEAKEVWQQRIDLLRPYQVNAAMIAATGNPQVKFLHCLPAFHDDQTTLGKQMAEQYGLHNGMEVTNDVFESAHSIVFDQAENRMHTIKAVMVATLSHSVEI
SIO_010081: DDA3937_RS01940
subclass of: SO_0000673
so part of: DDA3937_RS01940
location: complement(435556..436572)
location: region:435556-436572:-1
so has part: feature:435556-436572:-1:exon

WP_013316092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435556-436572:-1:exon

DDA3937_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rraB
locus tag: DDA3937_RS01945
old locus tag: Dda3937_01288
so part of: sequence
location: 436735..437163
location: region:436735-437163:1
so has part: feature:436735-437163:1:exon
subclass of: SO_0000010

9731796
type: Gene
SIO_000068: ncbigene

position:436735:1
position: 436735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437163:1
position: 437163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436735-437163:1:exon

DDA3937_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rraB
locus tag: DDA3937_RS01945
old locus tag: Dda3937_01288
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012005011.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease E inhibitor RraB
translation: MANRELLEEQREETRLIIEELLEDGSDPDALYTIEHHFSAEKFEDLEKVAVDAFKLGYEVTDAEEMEMEDGVMLMCCDAISELALNAELIDQQVEQLLALAERHGVNYDGWGTYFEDPDGEDEDEFEEDEDFYDEDDDGKRH
SIO_010081: DDA3937_RS01945
subclass of: SO_0000673
so part of: DDA3937_RS01945
location: 436735..437163
location: region:436735-437163:1
so has part: feature:436735-437163:1:exon

WP_013316093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436735-437163:1:exon

DDA3937_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01950
old locus tag: Dda3937_01289
so part of: sequence
location: complement(437238..437741)
location: region:437238-437741:-1
so has part: feature:437238-437741:-1:exon
subclass of: SO_0000010

9731797
type: Gene
SIO_000068: ncbigene

position:437238:-1
position: 437238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437741:-1
position: 437741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437238-437741:-1:exon

DDA3937_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01950
old locus tag: Dda3937_01289
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013316094.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MTISASTPLLTRPITAADNAAIASVIRRVSAEFGLTADKGYTVSDPDLDQLFELYCRPASAYWVVECNGEVVGGGGLAPLSGGESDICELQKMYFLPLARGQGIARQLAELALTFGREQGFRRCYLETTAHLTSAIHLYEKLGFEHIPHAMGSTGHVDCEVRMLKTL
SIO_010081: DDA3937_RS01950
subclass of: SO_0000673
so part of: DDA3937_RS01950
location: complement(437238..437741)
location: region:437238-437741:-1
so has part: feature:437238-437741:-1:exon

WP_013316094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437238-437741:-1:exon

DDA3937_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01955
old locus tag: Dda3937_01290
so part of: sequence
location: 438067..438654
location: region:438067-438654:1
so has part: feature:438067-438654:1:exon
subclass of: SO_0000010

9731799
type: Gene
SIO_000068: ncbigene

position:438067:1
position: 438067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438654:1
position: 438654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438067-438654:1:exon

DDA3937_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01955
old locus tag: Dda3937_01290
function: 3.1.2.5 regulation; type of regulation; transcriptional level; action unknown
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943019.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MEPSISETDRLSETDRRLAGRLAALRRERGWSLDELAQNSGISRATLSRLERMESSPTAALLGRLCAVYGCTMSCLLAEVETQLPQKLSAAQQPVWIDPETGFVRRSISPPSAGFRAEMIHGELPAGARIDYSAPPLAGLEHHLYVLEGQLVMALEGVAHTLGPQDSLRYRLYGASGFHNPGPDPVRYLIAICTP
SIO_010081: DDA3937_RS01955
subclass of: SO_0000673
so part of: DDA3937_RS01955
location: 438067..438654
location: region:438067-438654:1
so has part: feature:438067-438654:1:exon

WP_013316096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438067-438654:1:exon

DDA3937_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01960
old locus tag: Dda3937_01291
so part of: sequence
location: 438694..439176
location: region:438694-439176:1
so has part: feature:438694-439176:1:exon
subclass of: SO_0000010

9731800
type: Gene
SIO_000068: ncbigene

position:438694:1
position: 438694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439176:1
position: 439176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438694-439176:1:exon

DDA3937_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01960
old locus tag: Dda3937_01291
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843633.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MTNTSPRAPLVIREDDLTGEATRALVALHLAGMHDNSPPEQVFALDLSGLQAPDITFWSVWRGEQIAGIGALKMLPDGSGELKSMRTHPQCLRQGVAACLLVHILAEARRRGLRRLSLETGSGPAFEPALALYRKHGFVNGEAFAEYTASEFNQFLHLPL
SIO_010081: DDA3937_RS01960
subclass of: SO_0000673
so part of: DDA3937_RS01960
location: 438694..439176
location: region:438694-439176:1
so has part: feature:438694-439176:1:exon

WP_033112194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438694-439176:1:exon

DDA3937_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01965
old locus tag: Dda3937_01292
so part of: sequence
location: 439460..440527
location: region:439460-440527:1
so has part: feature:439460-440527:1:exon
subclass of: SO_0000010

9731801
type: Gene
SIO_000068: ncbigene

position:439460:1
position: 439460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440527:1
position: 440527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439460-440527:1:exon

DDA3937_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01965
old locus tag: Dda3937_01292
function: 1.5.1.9 metabolism; building block biosynthesis; amino acids; methionine
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843634.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MVNRLLSGLAGLIFLLVLSPFSTAQTLQPQEGNWAAPEFRFHTGETVNNLRIHYYTLGDSKKPAILLLHGTNQPIGALLAAGFGGELFGPGQPLDTSKYFIIIPESIGSGKSAKPSDGLRTKFPQYNYDDMVLAQYRLLTEGLGITHLRLVMGYSMGGMHTWMWGEKYPDMMDALVPMASQPNELSGRNWMLRRMLIETIKRDPAWKNGDYTTQPPSLQTANIMFSIATTGGTLAYQSKAPTRAQADKLVDERLAAPVTSDANDFIYIWNSSADYNASPELARIKAPLLVINSADDERNPVETGILESELKKVKHAELFLIPASKETSGHATMMSAKFYKNKLGEFLAAVPPHNK
SIO_010081: DDA3937_RS01965
subclass of: SO_0000673
so part of: DDA3937_RS01965
location: 439460..440527
location: region:439460-440527:1
so has part: feature:439460-440527:1:exon

WP_013316098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439460-440527:1:exon

DDA3937_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01970
old locus tag: Dda3937_01293
so part of: sequence
location: 440669..442288
location: region:440669-442288:1
so has part: feature:440669-442288:1:exon
subclass of: SO_0000010

9731802
type: Gene
SIO_000068: ncbigene

position:440669:1
position: 440669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442288:1
position: 442288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440669-442288:1:exon

DDA3937_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01970
old locus tag: Dda3937_01293
function: 5.3 cell processes; motility (incl. chemotaxis, energytaxis, aerotaxis, redoxtaxis)
function: 3.1.3.3 regulation; type of regulation; posttranscriptional; inhibition / activation of enzymes
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843636.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MFRKIKIRTTLSIMVFSLAVLSLIVGVLGLVAVQSGNKSFAHVDNVVLPGLVALNESSELLLRARLDLRLYESLMGKGDKDAATVALKRARGKIDDAGKKWQEYLTYPQFEQEKIISSDMAAKRDTLMNEFINPAFIALEAGNLDDYRQRAGKSTTLYADFDGAAKKLVQYKRQSIDEAYSDSNARVSRMQMILSVVIVCALVLAALAWSILTNLVVKPLNQAITVFDRIAEGDLRAKIDIRGNNEIAQLFGAVQHMRDGLENMVRAVRNGTDAISVGVEEIASGNIDLSSRTEQQAASLDETAASMEQILSTVGNNEDNTRKANDLAKKASDSASRGGSVVTEVVDTMRSIQQSSARISDIVGVIDGIAFQTNLLALNAAVEAARAGEQGKGFAVVASEVRTLAQRSATAAKEIGTMIDNSLNRIEKGAGLVEVAGKTMDEILSDVRKVVDIMGEIMLSSGEQSRGISQINIAINQMDGVTQQNASLVAEVATAASSLQAQVTHLQQSIASFRLDSETQPMLTGGLNAQPRVALVGAR
SIO_010081: DDA3937_RS01970
subclass of: SO_0000673
so part of: DDA3937_RS01970
location: 440669..442288
location: region:440669-442288:1
so has part: feature:440669-442288:1:exon

WP_013316099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440669-442288:1:exon

DDA3937_RS22980
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS22980
so part of: sequence
location: complement(442369..443729)
location: region:442369-443729:-1
so has part: feature:442369-443729:-1:exon
subclass of: SO_0000010

56705029
type: Gene
SIO_000068: ncbigene

position:442369:-1
position: 442369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443729:-1
position: 443729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442369-443729:-1:exon

DDA3937_RS22980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS22980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MATPKYSLELRLSVVNHFLSGRDGTRRTAEIFGVERTSVRRWVRAFQLHGIDGITWKNDSHSADFRLIVVQAVLNEELSMREAAARFNISNETVVRRWVSVYNDAGPEVLRNMKRGRPREMTRKTTPPPVDAVLEQLSPEELRAELRYLRAENAYLKKPESLGSKRKRRQKAQIISELRQGHALNDLLRAAGMSRSTWYHNISAMKRTDKHAGLKARIGDIYHHHKGRYGYRRITLSLRKEGIAVNHKTVQRLMVELSLRSLIRVKKYRSWKGETGKAAPNILNRNFCASKSNEKWVTDVTEFSLQGKKLYLSPVLDLFNREIISYSLSERPVMDMVNTMLSDALSVLSPEESPLLHSDQGWQYRMAGYQEKLKAKGVVQSMSRKGNCLDNAVIENFFGTLKSECFYPGQFCSIEELKPAIQDYIHYYNNERISLKLKGLSPVEYRTQALKAA
SIO_010081: DDA3937_RS22980
subclass of: SO_0000673
so part of: DDA3937_RS22980
location: complement(join(442369..443255,443255..443729))
location: region:442369-443729:-1
so has part: feature:443255-443729:-1:exon
so has part: feature:442369-443255:-1:exon

WP_148226855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443255-443729:-1:exon

position:443255:-1
position: 443255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:442369-443255:-1:exon

DDA3937_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01985
old locus tag: Dda3937_01296
so part of: sequence
location: complement(443874..446732)
location: region:443874-446732:-1
so has part: feature:443874-446732:-1:exon
subclass of: SO_0000010

9731805
type: Gene
SIO_000068: ncbigene

position:443874:-1
position: 443874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446732:-1
position: 446732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443874-446732:-1:exon

DDA3937_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01985
old locus tag: Dda3937_01296
EC number: 6.1.1.9
function: 2.3.1 information transfer; protein related; amino acid -activation
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: valine--tRNA ligase
translation: MEKTYNPHDIEQPLYEHWEKQGYFKPHGDTSQESFSIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMVVERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERFTMDDGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRDVKGSMWHLRYPLADGAKTADGNDYLVVATTRPETVLGDTGVAVNPEDPRYKDLIGKFLILPLVGRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHQLPMINILTFDGDIRQEAEVFSTNGEASTAYSSDIPEAFRGLERFAARKAIVAAFDELGLLEEIKAHDLTVPYGDRGGVVIEPMLTDQWYVRAGVLAKPAVEAVEDGRIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDDNGKVYVGRDEAEVRRDNNLSADVALHQDEDVLDTWFSSGLWTFSTLGWPEQTPELKAFHPSSVMVSGFDIIFFWIARMIMLTMHFIKDEDGKPQVPFHTVYMTGLIRDEEGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEDQDCGFTGGGEKVLSLADRWILAEFNRTVKTYREALDGYRFDLAANVLYEFTWNQFCDWYLELTKPVMTGGSDAELRGTRHTLVTVLEALLRLAHPIIPFITETIWQRVKVLKGVTDDTIMLQPFPAFDATLEDEQAFNDLEWIKQAIVAVRNIRAEMNIAPSKPLTLLLRDASADATRRVQDNLGFIQTLARLESITLLPAGDKGPVSVTKLVDGAELLIPMAGLIDKVAELDRLAKEVAKLELEISRIDSKLSNEGFVARAPEAVVAKEREKRDGYAVAKTKLLEQQATIAAL
SIO_010081: DDA3937_RS01985
subclass of: SO_0000673
so part of: DDA3937_RS01985
location: complement(443874..446732)
location: region:443874-446732:-1
so has part: feature:443874-446732:-1:exon

WP_013316102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443874-446732:-1:exon

DDA3937_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS01990
old locus tag: Dda3937_01297
so part of: sequence
location: complement(446746..447195)
location: region:446746-447195:-1
so has part: feature:446746-447195:-1:exon
subclass of: SO_0000010

9731806
type: Gene
SIO_000068: ncbigene

position:446746:-1
position: 446746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447195:-1
position: 447195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446746-447195:-1:exon

DDA3937_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS01990
old locus tag: Dda3937_01297
EC number: 2.7.7.7
function: 2.1.1 information transfer; DNA related; DNA replication
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209309.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit chi
translation: MKNATFYLIDHDRPSGELNACEALACSLAAARWRAGQRVLIACEDEQQALRLDEALWQREPHEFVPHNLAGEGPRQGAPVELAWPQKRGNAPRDLLISLQPQFADFATAFHEVIDFVPYEESLKQLARDRYKAYRSVGFQLTTATPPTH
SIO_010081: DDA3937_RS01990
subclass of: SO_0000673
so part of: DDA3937_RS01990
location: complement(446746..447195)
location: region:446746-447195:-1
so has part: feature:446746-447195:-1:exon

WP_013316103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446746-447195:-1:exon

DDA3937_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: pepA
locus tag: DDA3937_RS01995
old locus tag: Dda3937_01298
so part of: sequence
location: complement(447308..448816)
location: region:447308-448816:-1
so has part: feature:447308-448816:-1:exon
subclass of: SO_0000010

9731807
type: Gene
SIO_000068: ncbigene

position:447308:-1
position: 447308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448816:-1
position: 448816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447308-448816:-1:exon

DDA3937_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: pepA
locus tag: DDA3937_RS01995
old locus tag: Dda3937_01298
EC number: 3.4.11.1
function: 7.1 location of gene products; cytoplasm
function: 1.2.3 metabolism; macromolecule degradation; proteins/peptides/glycopeptides
function: 2.1.3 information transfer; DNA related; DNA recombination
function: 2.2.2 information transfer; RNA related; transcription related
inference: COORDINATES: similar to AA sequence:RefSeq:NP_463337.1
GO function: GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
GO process: GO:0019538 - protein metabolic process [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: leucyl aminopeptidase
translation: MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKVGQSLLLHHVPNILSERILLIGCGKERELDERQYKQVIQKTINALNETGSMEAVCFLTELHVKGRNTYWKVRQAVETAKETLYTFDQLKTNKVELRRPLRKMVFNVPTRRELTSGERAIQHGLAIASGIKAAKDLGNMPPNICNAAYLASQARQLADGYSQVTTRVIGEQQMKELGMNAYLAVGQGSQNESLMSVIEYKGDPDNNSKPIVLVGKGLTFDAGGISIKPADSMDEMKYDMCGAASVYGVMRVAAELALPLNIIGILAGCENMVDGRSYRPGDILTTMSGQTVEVLNTDAEGRLVLCDTLTYVERFEPDVVIDVATLTGACVIALGHHLTGLMSNHNPLAHELLGASEQAGDRAWRLPLGDEYQEQLDSNFADMANIGGRPGGAITAACFLSRFTRKYSWAHLDIAGTAWRSGKAKGATGRPVALLSQFLLNRAGLNDAE
SIO_010081: DDA3937_RS01995
subclass of: SO_0000673
so part of: DDA3937_RS01995
location: complement(447308..448816)
location: region:447308-448816:-1
so has part: feature:447308-448816:-1:exon

WP_013316104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447308-448816:-1:exon

DDA3937_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: lptF
locus tag: DDA3937_RS02000
old locus tag: Dda3937_01299
so part of: sequence
location: 449100..450218
location: region:449100-450218:1
so has part: feature:449100-450218:1:exon
subclass of: SO_0000010

9731808
type: Gene
SIO_000068: ncbigene

position:449100:1
position: 449100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450218:1
position: 450218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449100-450218:1:exon

DDA3937_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: lptF
locus tag: DDA3937_RS02000
old locus tag: Dda3937_01299
EC number: 7.5.2.5
function: 0.1 unknown function; conserved hypothetical product
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883140.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO process: GO:0015920 - lipopolysaccharide transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS export ABC transporter permease LptF
translation: MIIIRYLVRETFKSQVAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGVPAMAQLILPLSLFLGLLMTFGRLYAESEITVMHACGLSKGVLLKAALLLSLLTASFAAANVLWLSPWSSRHQDEVLAEARANPGMASLAEGQFQQTQDGNSVLFVGKANGSDFERVFLAQLHPRENTRPSVVVADRGTVTARGDGSQVVTLSKGTRYEGTAMLRDFRITDFIDYQAIIGYQPVALDPNNVDQMDMQTLWRSSDIAARAEFHWRLTLILSVLVMAIMVVPLSVVNPRQGRVLSMLPAMLLYLVFFLLQSSLRSNAGKGKLDPLVWMWLTNLGYFALAIALNLWDSLPARKIRASLKSANGQKTKGAA
SIO_010081: DDA3937_RS02000
subclass of: SO_0000673
so part of: DDA3937_RS02000
location: 449100..450218
location: region:449100-450218:1
so has part: feature:449100-450218:1:exon

WP_013316105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449100-450218:1:exon

DDA3937_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: lptG
locus tag: DDA3937_RS02005
old locus tag: Dda3937_01300
so part of: sequence
location: 450220..451290
location: region:450220-451290:1
so has part: feature:450220-451290:1:exon
subclass of: SO_0000010

9731809
type: Gene
SIO_000068: ncbigene

position:450220:1
position: 450220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451290:1
position: 451290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450220-451290:1:exon

DDA3937_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: lptG
locus tag: DDA3937_RS02005
old locus tag: Dda3937_01300
EC number: 7.5.2.5
function: 0.1 unknown function; conserved hypothetical product
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004953051.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO process: GO:0015920 - lipopolysaccharide transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS export ABC transporter permease LptG
translation: MFRVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGGYSVMGAGLYTLLSVPKDIEIFFPMAALLGALLGLGTLATRSELVVMQASGFTRLQIAAAVMKTAIPLVLLTMAIGEWMAPAGEQMARNYRSQMMYGGSMLSTQGGLWAKDGNDFVYIQRVAGENELAGVNIYHFDKQSKLLSIRYAASALYENGTWKLSQVEESDLRDSKQIGGSQTVSGEWKTNLTPDKLGVVALDPDALSIRGLFDYINYLHQSGQEASRYQLNMWSKLFAPLSVAVMMLMALSFIFGPLRSVPAGVRIVIGISFGFLFYVLDQIFGPLSLVYHIPPVLGASLPSALFLFISIMLLLKRR
SIO_010081: DDA3937_RS02005
subclass of: SO_0000673
so part of: DDA3937_RS02005
location: 450220..451290
location: region:450220-451290:1
so has part: feature:450220-451290:1:exon

WP_013316106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450220-451290:1:exon

DDA3937_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02010
old locus tag: Dda3937_04246
so part of: sequence
location: 451654..451738
location: region:451654-451738:1
so has part: feature:451654-451738:1:exon
subclass of: SO_0000663

9731810
type: Gene
SIO_000068: ncbigene

position:451654:1
position: 451654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451738:1
position: 451738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451654-451738:1:exon

DDA3937_RS02010
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 198628
locus tag: DDA3937_RS02010
old locus tag: Dda3937_04246
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:451688..451690,aa:Leu,seq:caa)
SIO_010081: DDA3937_RS02010
subclass of: SO_0000673
so part of: DDA3937_RS02010
location: 451654..451738
location: region:451654-451738:1
so has part: feature:451654-451738:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:451654-451738:1:exon

DDA3937_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02015
old locus tag: Dda3937_01301
so part of: sequence
location: 451957..453219
location: region:451957-453219:1
so has part: feature:451957-453219:1:exon
subclass of: SO_0000010

9731811
type: Gene
SIO_000068: ncbigene

position:451957:1
position: 451957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453219:1
position: 453219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451957-453219:1:exon

DDA3937_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02015
old locus tag: Dda3937_01301
function: 8.1.4 extrachromosomal; prophage genes and phage related functions; Integration, recombination
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000772685.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase arm-type DNA-binding domain-containing protein
translation: MKLNARQVETAKPKEKTYKMADGGGLYLEITPRGSKYWRMKYRRPDDKKEDRLAFGVWPTVTLADARAKRDEAKKLLVQGIDPKAEQKEAQAETAGAYTFETIARQWHASNKRWGDYHRARVMRYLELYIFPHIGTADIRKLKTSHLLAPIKAVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMSGALTTTKARHYPALPPERLHEFLSRLAAYRGRQMTRIAVELTLLTFVRSSELRFAQWHEFDFDKAYWRVPAQREAIKGVRYSYRGMKMKEEHIVPLSRQAVALLEQLKAISGDNKCLFPGDHDPEKVMSENTVNNALRAMGYDTQTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYTHTSEYLDERRLMVQWWADYLEVLKREYITSYDFAKMSGK
SIO_010081: DDA3937_RS02015
subclass of: SO_0000673
so part of: DDA3937_RS02015
location: 451957..453219
location: region:451957-453219:1
so has part: feature:451957-453219:1:exon

WP_013316107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451957-453219:1:exon

DDA3937_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02020
old locus tag: Dda3937_01302
so part of: sequence
location: complement(453448..456006)
location: region:453448-456006:-1
so has part: feature:453448-456006:-1:exon
subclass of: SO_0000010

9731812
type: Gene
SIO_000068: ncbigene

position:453448:-1
position: 453448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456006:-1
position: 456006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453448-456006:-1:exon

DDA3937_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02020
old locus tag: Dda3937_01302
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001093689.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MSTLAHEIISQIRNKFEFKSDLGFLFSHSFLKKNDKNIFVNRHSEEDNAPTEIFKRLIESAYLFSQSESDEDKNLAQSIAYHLNTITDDDFLKKMSENLLRILGNLPGANYLQKENRDLPESFYSYFKRRFIEKENTIKISNKELILTDFQKKVWDSLHTNKSQAISAPTSAGKSFLVVEMIINKIISGEINFVVYVAPTRALVNEITEKFINKTLEYHNKIRVTSIPTVNDGFHKQIFVLTQERLQVLLDHQYHKIDMVVIDEAQSISDEIRGMILQDGLDRISVQNPHAKYVFIAPGAVGFDDLADIIGIDKLHIEKTNYSPVVQNKIIVKVDPAKENNLKLSLLDNSNILPIGEITSKRGFANENTRLAAVALELGKNEGSLVYGTGAADAEDVAKQISSGLLPIKNDNDLQELSKFIKKHVHKDYSLANHVLRGVGYHYGKMPSLLRETLEKNFIKNKLKFLVCTTTLFQGVNLPAKNVFIDTPTRGNRGEKLDPASLWNFAGRAGRLGYSFSGNVYLIDYDDWETKPLDSKIDFQITSSFKKVVTDDFDKILERLNKDNHSGVSQYTNVDAAVGLLISRAAKGDLHNFLTRSFRSITEKSKINSIEIATRNSLESITIPHNILSLNWTVDPFGQERLYNRFIQKIKEGKADELIPRHPSGDVYANYVGVFSRINKYIINNNTAKFSNYLTSMALNWMRGKSLPEIIDLSIKKKKEKGGNKPVNVDRTVREVFDFIEDNLRFKYVQLGKAYVDLLRQALVDNNLSHKSEEIYDFPLSLELGVASIAGQAFIELGLSRISASYLENIIPNSNPTINMAKDWLKNNDYETLDLPLTIFRELEDKGLLNSD
SIO_010081: DDA3937_RS02020
subclass of: SO_0000673
so part of: DDA3937_RS02020
location: complement(453448..456006)
location: region:453448-456006:-1
so has part: feature:453448-456006:-1:exon

WP_033111547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453448-456006:-1:exon

DDA3937_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02025
old locus tag: Dda3937_01303
so part of: sequence
location: complement(455987..457027)
location: region:455987-457027:-1
so has part: feature:455987-457027:-1:exon
subclass of: SO_0000010

9731813
type: Gene
SIO_000068: ncbigene

position:455987:-1
position: 455987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457027:-1
position: 457027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455987-457027:-1:exon

DDA3937_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02025
old locus tag: Dda3937_01303
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000834167.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1837 domain-containing protein
translation: MKSVDANSLHKIYKPVYGLEHIIILAQESLPTAPFKVNLLCLGFKEDMPKDKELAETLFLELVHYCIPHPVIEKRKKQALDEGKDEARLYSELLREARSLFMKYKLESAIKKKSGETEEKFEQRVRNANSRYGEVGELISYCIAIHFLKASQLVSKMALKTSSEMPVFGLDGIHATIDADGTLTVFYLESKITREFDSGSEQFSKSVSGFEIDRNGRRNEYRIIQDLSNLESLEGEERSKAINYFNPYSSQSSNVRERFIGIIAYSEKNYSNKLPINDEAPLSIHFEHFKNGYTSSYQEKINTLTSDLTKAGATLQKCRAYIFALPDVDNFKLDFAKELSGEHFSA
SIO_010081: DDA3937_RS02025
subclass of: SO_0000673
so part of: DDA3937_RS02025
location: complement(455987..457027)
location: region:455987-457027:-1
so has part: feature:455987-457027:-1:exon

WP_033111548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455987-457027:-1:exon

DDA3937_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02030
old locus tag: Dda3937_01304
so part of: sequence
location: 458532..459413
location: region:458532-459413:1
so has part: feature:458532-459413:1:exon
subclass of: SO_0000010

9731814
type: Gene
SIO_000068: ncbigene

position:458532:1
position: 458532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459413:1
position: 459413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458532-459413:1:exon

DDA3937_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02030
old locus tag: Dda3937_01304
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013316110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase domain-containing protein
translation: MTKLSREMKTWAKQAGGSHKTVHDRLRIVERLCRHLLALNIQVRSVQHVKARHIESYVAARRSQGMALRTLHNEMSALRGVLRLAGRGKLVDDPRLSNQALGLGGASRAGTKYAIPDARYQSVLESARREDAGLACALQLARLLGLRSQEAVQCCASLKRWEQQLTRQADRLTVVFGTKGGRPRETRVLDSAAVLAAVREALVIADNRNGKLIDKPDLKTAMNFWRARTTRLGLTGPHSPHSLRYAWAQDAMRFYLADGFSRQEARALVSMDLGHGDGRGRYVERVYTRQEEA
SIO_010081: DDA3937_RS02030
subclass of: SO_0000673
so part of: DDA3937_RS02030
location: 458532..459413
location: region:458532-459413:1
so has part: feature:458532-459413:1:exon

WP_013316110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458532-459413:1:exon

DDA3937_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02035
old locus tag: Dda3937_01305
so part of: sequence
location: 459416..459616
location: region:459416-459616:1
so has part: feature:459416-459616:1:exon
subclass of: SO_0000010

9731815
type: Gene
SIO_000068: ncbigene

position:459416:1
position: 459416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459616:1
position: 459616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459416-459616:1:exon

DDA3937_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02035
old locus tag: Dda3937_01305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012886376.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AlpA family transcriptional regulator
translation: MSNLTLLRLPDVMKKTSLKKSWIYYLIDRGEFPQPVKLGARSVAWVESEINDWIAERIRQRAEGRK
SIO_010081: DDA3937_RS02035
subclass of: SO_0000673
so part of: DDA3937_RS02035
location: 459416..459616
location: region:459416-459616:1
so has part: feature:459416-459616:1:exon

WP_026357784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459416-459616:1:exon

DDA3937_RS23550
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23550
pseudo: true
so part of: sequence
location: 459613..>459942
location: region:459613-459942:1
so has part: feature:459613-459942:1:exon
subclass of: SO_0000010

70537605
type: Gene
SIO_000068: ncbigene

position:459613:1
position: 459613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459942:1
position: 459942
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459613-459942:1:exon

DDA3937_RS23550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23550
inference: COORDINATES: protein motif:HMM:NF022029.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ash family protein
SIO_010081: DDA3937_RS23550
subclass of: SO_0000673
so part of: DDA3937_RS23550
location: 459613..>459942
location: region:459613-459942:1
so has part: feature:459613-459942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:459613-459942:1:exon

DDA3937_RS23555
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23555
so part of: sequence
location: 459976..460152
location: region:459976-460152:1
so has part: feature:459976-460152:1:exon
subclass of: SO_0000010

70537606
type: Gene
SIO_000068: ncbigene

position:459976:1
position: 459976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460152:1
position: 460152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459976-460152:1:exon

DDA3937_RS23555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004703968.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYNPTPLLLEEIADHCRVLAYAIIELENPVAKELLMFILWERLNLLNDALDAEGPDNE
SIO_010081: DDA3937_RS23555
subclass of: SO_0000673
so part of: DDA3937_RS23555
location: 459976..460152
location: region:459976-460152:1
so has part: feature:459976-460152:1:exon

WP_225622669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459976-460152:1:exon

DDA3937_RS23560
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23560
pseudo: true
so part of: sequence
location: 460145..>461035
location: region:460145-461035:1
so has part: feature:460145-461035:1:exon
subclass of: SO_0000010

70537607
type: Gene
SIO_000068: ncbigene

position:460145:1
position: 460145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461035:1
position: 461035
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460145-461035:1:exon

DDA3937_RS23560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23560
inference: COORDINATES: protein motif:HMM:NF024755.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: toprim domain-containing protein
SIO_010081: DDA3937_RS23560
subclass of: SO_0000673
so part of: DDA3937_RS23560
location: 460145..>461035
location: region:460145-461035:1
so has part: feature:460145-461035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:460145-461035:1:exon

DDA3937_RS23565
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23565
so part of: sequence
location: 461111..462190
location: region:461111-462190:1
so has part: feature:461111-462190:1:exon
subclass of: SO_0000010

70537608
type: Gene
SIO_000068: ncbigene

position:461111:1
position: 461111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462190:1
position: 462190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461111-462190:1:exon

DDA3937_RS23565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016674110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helicase RepA family protein
translation: MPDAGQSPVAVFSSALPLRKGSEGFDTRQDYLIKGYLPSGAVASAYGASGSYKSFLAVSWACHIATGKPWANRPVTQGAVIYVVGEGGIGVPRRIRAWEETLNDRSPIDALYRVDCPVFPASPDSVEQVIKAAHDVQAASGMAVRLIILDTLARCFGGSDENAAKDMGAFIQGCDYIKAATQATVLIIHHSGKDQDKGARGSSAFRAALDVEFNVRREADGQALILTCTKMKDAEEPPRRAYDLTAVNLYVDDDGEPVTSLVLRDEGRDVRDDLTDADPALSGITRLTDNHVALWEAIRSRTASGDGCTRALVRDDMRAMGFDVSKKFTRWLDKLVRDDLIALDGENIVPLSKRGNVGE
SIO_010081: DDA3937_RS23565
subclass of: SO_0000673
so part of: DDA3937_RS23565
location: 461111..462190
location: region:461111-462190:1
so has part: feature:461111-462190:1:exon

WP_237703469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461111-462190:1:exon

DDA3937_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02050
old locus tag: Dda3937_01308
so part of: sequence
location: complement(462414..462680)
location: region:462414-462680:-1
so has part: feature:462414-462680:-1:exon
subclass of: SO_0000010

9731819
type: Gene
SIO_000068: ncbigene

position:462414:-1
position: 462414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462680:-1
position: 462680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462414-462680:-1:exon

DDA3937_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02050
old locus tag: Dda3937_01308
function: 3.1.2 regulation; type of regulation; transcriptional level
function: 2.2.2 information transfer; RNA related; transcription related
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848023.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MTTYNDWHQADIIAGLRKKGTTLAALSRSAGLSSSTLANVLVRPWPKGEWLVATALDKHPAEIWPSRYFDETGTLIDRKRRIRQERGK
SIO_010081: DDA3937_RS02050
subclass of: SO_0000673
so part of: DDA3937_RS02050
location: complement(462414..462680)
location: region:462414-462680:-1
so has part: feature:462414-462680:-1:exon

WP_013316114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462414-462680:-1:exon

DDA3937_RS23570
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23570
old locus tag: Dda3937_01309
so part of: sequence
location: 462776..462991
location: region:462776-462991:1
so has part: feature:462776-462991:1:exon
subclass of: SO_0000010

70537609
type: Gene
SIO_000068: ncbigene

position:462776:1
position: 462776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462991:1
position: 462991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462776-462991:1:exon

DDA3937_RS23570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23570
old locus tag: Dda3937_01309
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843648.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MERLGILAGIDEATASARMNQYERGIHTPDFELACRLAAVLHVPACYFYTVEDDLAEMILSFYDTKENPSS
SIO_010081: DDA3937_RS23570
subclass of: SO_0000673
so part of: DDA3937_RS23570
location: 462776..462991
location: region:462776-462991:1
so has part: feature:462776-462991:1:exon

WP_071819862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462776-462991:1:exon

DDA3937_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02055
old locus tag: Dda3937_01310
so part of: sequence
location: complement(463135..463536)
location: region:463135-463536:-1
so has part: feature:463135-463536:-1:exon
subclass of: SO_0000010

9731821
type: Gene
SIO_000068: ncbigene

position:463135:-1
position: 463135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463536:-1
position: 463536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463135-463536:-1:exon

DDA3937_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02055
old locus tag: Dda3937_01310
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843649.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNLIKFSLILSTSLIAIPAFSASFSNVEICKAAISMEFAKEPKIMKTKVNGDLINLQYHRPSDNSLWKYQCKMIEGSRVLWRSAGSDSEPNYIGRWRDNPNDALITYTEENGVLKMTNSQAGEQTFKHADLK
SIO_010081: DDA3937_RS02055
subclass of: SO_0000673
so part of: DDA3937_RS02055
location: complement(463135..463536)
location: region:463135-463536:-1
so has part: feature:463135-463536:-1:exon

WP_013316116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463135-463536:-1:exon

DDA3937_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02060
old locus tag: Dda3937_01311
so part of: sequence
location: complement(463565..464044)
location: region:463565-464044:-1
so has part: feature:463565-464044:-1:exon
subclass of: SO_0000010

9731822
type: Gene
SIO_000068: ncbigene

position:463565:-1
position: 463565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464044:-1
position: 464044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463565-464044:-1:exon

DDA3937_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02060
old locus tag: Dda3937_01311
EC number: 2.3.1.-
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855199.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MGITAPELLLPQHAVVDFHCSEPSLNEWLKRKALKNQTLGASRTFVVCEAGTQRVVGFYALASGSIQRQVAPGAFRRNMPDPIPVLVLGRLAVDERYQRMGIGAGLLKDAVLRSRNVAQQVGNKALLVHALSDEAKAFYQYWGFVPSEIQEHTLLLSLW
SIO_010081: DDA3937_RS02060
subclass of: SO_0000673
so part of: DDA3937_RS02060
location: complement(463565..464044)
location: region:463565-464044:-1
so has part: feature:463565-464044:-1:exon

WP_013316117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463565-464044:-1:exon

DDA3937_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02065
old locus tag: Dda3937_01312
so part of: sequence
location: complement(464035..464307)
location: region:464035-464307:-1
so has part: feature:464035-464307:-1:exon
subclass of: SO_0000010

9731823
type: Gene
SIO_000068: ncbigene

position:464035:-1
position: 464035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464307:-1
position: 464307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464035-464307:-1:exon

DDA3937_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02065
old locus tag: Dda3937_01312
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000801915.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1778 domain-containing protein
translation: MRTEPKEMPINIRAKASQRELIDVAAKLLSKSRTEFILDAACREAEDVLLDQRLFLVNDEQYDAFIQVLESPVTDNPRVNALLNRKSPWE
SIO_010081: DDA3937_RS02065
subclass of: SO_0000673
so part of: DDA3937_RS02065
location: complement(464035..464307)
location: region:464035-464307:-1
so has part: feature:464035-464307:-1:exon

WP_013316118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464035-464307:-1:exon

DDA3937_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02070
old locus tag: Dda3937_01313
so part of: sequence
location: complement(464868..465587)
location: region:464868-465587:-1
so has part: feature:464868-465587:-1:exon
subclass of: SO_0000010

9731824
type: Gene
SIO_000068: ncbigene

position:464868:-1
position: 464868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465587:-1
position: 465587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464868-465587:-1:exon

DDA3937_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02070
old locus tag: Dda3937_01313
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015854286.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltransferase domain-containing protein
translation: MNMVINTPFTDGYDNAFLLDTMMGPNAMRITEEMATMLPISPGMRILDLGCGKGISSILLAKKYDVTVFAADLWISPTENAERFASLGVDSKIFPLLVDATKEIPFAHEYFDMIISVDAWQYFGSNDGMLTKLLPFVKKGGLIAVAVPGFIQDYSEGNLPEVVKPFWTPDWYFYSCNWWKALWEKESGIEITLVREMDSCQQAWDDFMECSLVQEMMVPIMEAGAGEYFNIIQIVGRKV
SIO_010081: DDA3937_RS02070
subclass of: SO_0000673
so part of: DDA3937_RS02070
location: complement(464868..465587)
location: region:464868-465587:-1
so has part: feature:464868-465587:-1:exon

WP_081441324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464868-465587:-1:exon

DDA3937_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02075
old locus tag: Dda3937_01314
so part of: sequence
location: complement(465598..465855)
location: region:465598-465855:-1
so has part: feature:465598-465855:-1:exon
subclass of: SO_0000010

9731825
type: Gene
SIO_000068: ncbigene

position:465598:-1
position: 465598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465855:-1
position: 465855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465598-465855:-1:exon

DDA3937_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02075
old locus tag: Dda3937_01314
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:NP_463360.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YjhX family toxin
translation: MNLSRQEQRTLHVLAKGGRIAHIRDASGHITSVECYSREGLLLSDCTLAVFKKLKTKKLIKSINGQPYRINTTGLNTVRAQPDNR
SIO_010081: DDA3937_RS02075
subclass of: SO_0000673
so part of: DDA3937_RS02075
location: complement(465598..465855)
location: region:465598-465855:-1
so has part: feature:465598-465855:-1:exon

WP_013316120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465598-465855:-1:exon

DDA3937_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02080
old locus tag: Dda3937_01315
so part of: sequence
location: complement(466300..466638)
location: region:466300-466638:-1
so has part: feature:466300-466638:-1:exon
subclass of: SO_0000010

9731826
type: Gene
SIO_000068: ncbigene

position:466300:-1
position: 466300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466638:-1
position: 466638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466300-466638:-1:exon

DDA3937_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02080
old locus tag: Dda3937_01315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005971178.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDTRATPTDSSITIFRDLIASLPFYQLDDAQLCDLGAIAAESVSGLCHGLSELGDRLQNGADIGPEQRRHLGASLNAAAHLIPALLEICEQAERCTRTVPHVGELIPRYVI
SIO_010081: DDA3937_RS02080
subclass of: SO_0000673
so part of: DDA3937_RS02080
location: complement(466300..466638)
location: region:466300-466638:-1
so has part: feature:466300-466638:-1:exon

WP_033111549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466300-466638:-1:exon

DDA3937_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02085
old locus tag: Dda3937_01316
so part of: sequence
location: 467110..467913
location: region:467110-467913:1
so has part: feature:467110-467913:1:exon
subclass of: SO_0000010

9731828
type: Gene
SIO_000068: ncbigene

position:467110:1
position: 467110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467913:1
position: 467913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467110-467913:1:exon

DDA3937_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02085
old locus tag: Dda3937_01316
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883169.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKGYHLKEQHRRKSWVRDTNTDAEAALLNYLPELLNMLKLTMPVPPSVITRDIEGETFFDILYRCDFNARQNIHQIEKIFSVKEEFTPEWVPGADLALPVIAQEDHVLPDKHYLLLGLDLFAAVEQGDICISPHGWGDNHLTGKDMSASEFLELKPRPACLYAGVLHGHAGQPLSPPQLLGWLELMRQAYGYPSSTVVLLAPVAESSGFAGWFGLYQRNGVIGKAPQWQSLSVLAKDVHFWEAMKETGLAHNVYASGMGANSAYQGN
SIO_010081: DDA3937_RS02085
subclass of: SO_0000673
so part of: DDA3937_RS02085
location: 467110..467913
location: region:467110-467913:1
so has part: feature:467110-467913:1:exon

WP_033111550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467110-467913:1:exon

DDA3937_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02090
old locus tag: Dda3937_01317
so part of: sequence
location: complement(468107..468589)
location: region:468107-468589:-1
so has part: feature:468107-468589:-1:exon
subclass of: SO_0000010

9731829
type: Gene
SIO_000068: ncbigene

position:468107:-1
position: 468107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468589:-1
position: 468589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468107-468589:-1:exon

DDA3937_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02090
old locus tag: Dda3937_01317
function: 7.1 location of gene products; cytoplasm
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.5 regulation; type of regulation; transcriptional level; action unknown
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883170.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lrp/AsnC family transcriptional regulator
translation: MKLNLTDIKILTLLQKDARITNQTLAEQIGMSPSPCWRKVRKLEEEDVIQSYRAVLDRRKIGLGVMVFVRVTIDSHSEAQARKFEQEVTDLEDVVACYSMGGDADFLLQVVSRDLDSYAEFAMSVIRRLPGIKEMQSMFVLKEIKPFATFPIKKPLKTPQ
SIO_010081: DDA3937_RS02090
subclass of: SO_0000673
so part of: DDA3937_RS02090
location: complement(468107..468589)
location: region:468107-468589:-1
so has part: feature:468107-468589:-1:exon

WP_013316124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468107-468589:-1:exon

DDA3937_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02095
old locus tag: Dda3937_01318
so part of: sequence
location: 468753..469127
location: region:468753-469127:1
so has part: feature:468753-469127:1:exon
subclass of: SO_0000010

9731830
type: Gene
SIO_000068: ncbigene

position:468753:1
position: 468753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469127:1
position: 469127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468753-469127:1:exon

DDA3937_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02095
old locus tag: Dda3937_01318
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843665.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Dabb family protein
translation: MILHIVLFTFKNPYNWSSPAALEAEEITRSHPLHISEIRGWGCGRNITDRAVAADFVVLGMFDTQQDVAAYLVHSNHQVGVEKWKAIAEWNVVDIDLNSDLSHTYGLLRSLGMAGNNCLEVVGD
SIO_010081: DDA3937_RS02095
subclass of: SO_0000673
so part of: DDA3937_RS02095
location: 468753..469127
location: region:468753-469127:1
so has part: feature:468753-469127:1:exon

WP_033111551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468753-469127:1:exon

DDA3937_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02100
old locus tag: Dda3937_01319
so part of: sequence
location: 469130..469552
location: region:469130-469552:1
so has part: feature:469130-469552:1:exon
subclass of: SO_0000010

9731831
type: Gene
SIO_000068: ncbigene

position:469130:1
position: 469130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469552:1
position: 469552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469130-469552:1:exon

DDA3937_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02100
old locus tag: Dda3937_01319
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943798.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2000 domain-containing protein
translation: MKFDAASHKCTIVIDKDLGAGLSINAASVIGISFGRTVENLVGPDMQSQDAVNYPGVIYAPLPVLLAPGGYVQELLRHAENDEEVYAMPFSALAQSCRTYDEYGERISAVSSDNIELVAIGLIGPKKKITRLTGNLPLFK
SIO_010081: DDA3937_RS02100
subclass of: SO_0000673
so part of: DDA3937_RS02100
location: 469130..469552
location: region:469130-469552:1
so has part: feature:469130-469552:1:exon

WP_013316126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469130-469552:1:exon

DDA3937_RS22985
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS22985
old locus tag: Dda3937_01320
so part of: sequence
location: 469685..470092
location: region:469685-470092:1
so has part: feature:469685-470092:1:exon
subclass of: SO_0000010

56705030
type: Gene
SIO_000068: ncbigene

position:469685:1
position: 469685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470092:1
position: 470092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469685-470092:1:exon

DDA3937_RS22985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS22985
old locus tag: Dda3937_01320
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: phenylacetate--CoA ligase
translation: MYAIFKPELMQKAQHIYEEHLRFERGETTLSALREHQKIQLISTLDYVTNHSLFYKKHLAGLTANDVSQFSLEQISSLPFTTKEDLRKNGGLLPSAALHDCWVYYETTGTTGTPTPCPRNEIDSLHNNTPLILRL
SIO_010081: DDA3937_RS22985
subclass of: SO_0000673
so part of: DDA3937_RS22985
location: 469685..470092
location: region:469685-470092:1
so has part: feature:469685-470092:1:exon

WP_148226856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469685-470092:1:exon

DDA3937_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02105
old locus tag: Dda3937_01321
so part of: sequence
location: 470171..470440
location: region:470171-470440:1
so has part: feature:470171-470440:1:exon
subclass of: SO_0000010

23677388
type: Gene
SIO_000068: ncbigene

position:470171:1
position: 470171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470440:1
position: 470440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470171-470440:1:exon

DDA3937_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02105
old locus tag: Dda3937_01321
function: 0 unknown function
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: prephenate dehydratase-like protein
translation: MDLRLKLTGTFVFDTPLYGLAIKETLPNRPVIVASHPAPVPLIQELLPDGLSVERVVTMSSTSAAVQAVANHEVDMALTTEVAVNRKLV
SIO_010081: DDA3937_RS02105
subclass of: SO_0000673
so part of: DDA3937_RS02105
location: 470171..470440
location: region:470171-470440:1
so has part: feature:470171-470440:1:exon

WP_013316128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470171-470440:1:exon

DDA3937_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02110
old locus tag: Dda3937_01322
so part of: sequence
location: 470489..471115
location: region:470489-471115:1
so has part: feature:470489-471115:1:exon
subclass of: SO_0000010

9731834
type: Gene
SIO_000068: ncbigene

position:470489:1
position: 470489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471115:1
position: 471115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470489-471115:1:exon

DDA3937_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02110
old locus tag: Dda3937_01322
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004158247.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysE family translocator
translation: MLEPAQILAYITALGLAAAIPGPGMTALVARSVSGGAITGFTMLAGLIIGDLIYLSFAVFGLAVVAHSYGALFTLISWGAAVYLGWLSWQFWSHNPEAIAIDQRISRRELASAWFSGLTITLGNPKTIAFYLALLPLVITLDTVSLQTWALMLVPLTISVLLAVGAVFILGALRIRHLLASTRAQLWLFRSAAMIMLAASLGMVWKTL
SIO_010081: DDA3937_RS02110
subclass of: SO_0000673
so part of: DDA3937_RS02110
location: 470489..471115
location: region:470489-471115:1
so has part: feature:470489-471115:1:exon

WP_033111552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470489-471115:1:exon

DDA3937_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02115
old locus tag: Dda3937_01323
so part of: sequence
location: complement(471186..471812)
location: region:471186-471812:-1
so has part: feature:471186-471812:-1:exon
subclass of: SO_0000010

9731835
type: Gene
SIO_000068: ncbigene

position:471186:-1
position: 471186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471812:-1
position: 471812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471186-471812:-1:exon

DDA3937_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02115
old locus tag: Dda3937_01323
function: 4.2.A.75 transport; Electrochemical potential driven transporters; Porters (Uni-, Sym- and Antiporters); The L-lysine exporter (LysE) Family
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015847972.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysE/ArgO family amino acid transporter
translation: MPLPIFITGFMTSAGLIAAIGAQNSFVLRQGMRREHVFWVSSVCFLCDMALMTLGVLGLGKIINDSKPAITTLTLAGVLFLLWYGYNALKSAWRGNNQLTLTTQGDGLRRRRTVIGACLAVSLLNPHVYLDTVAIIGGISSGIAPDLKLFYLAGSISASFIWFYTIGYTAAACSRYFANPLTWRVIDTLIGGYMIFMAFQLCRFLYQV
SIO_010081: DDA3937_RS02115
subclass of: SO_0000673
so part of: DDA3937_RS02115
location: complement(471186..471812)
location: region:471186-471812:-1
so has part: feature:471186-471812:-1:exon

WP_013316130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471186-471812:-1:exon

DDA3937_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02120
old locus tag: Dda3937_01324
so part of: sequence
location: complement(471990..472766)
location: region:471990-472766:-1
so has part: feature:471990-472766:-1:exon
subclass of: SO_0000010

9731836
type: Gene
SIO_000068: ncbigene

position:471990:-1
position: 471990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472766:-1
position: 472766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471990-472766:-1:exon

DDA3937_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02120
old locus tag: Dda3937_01324
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843670.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease
translation: MAASTLWTRDQLLVAFTLYSQLPFGKLHSRNPEIIHYAKLIGRTPSALAMKLVNIASLDPVIIDSGRTGLSQASKADRELWQELEQDPEAFEQQCQQAIAALAAPDATPLHAQEESAPDYCGHECLTATKARVGQQQFRKRVLNAYDERCCITGLEEPILLIASHIRPWKDIAEHRLDPSNGLCLSALHDKAFDQGLIGFNDHLELLLSPRIKVLTSAIVQSQFEQYEGKPLHLPKAEKYAPKLAHIQHHRENIFSKH
SIO_010081: DDA3937_RS02120
subclass of: SO_0000673
so part of: DDA3937_RS02120
location: complement(471990..472766)
location: region:471990-472766:-1
so has part: feature:471990-472766:-1:exon

WP_013316131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471990-472766:-1:exon

DDA3937_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02125
old locus tag: Dda3937_01325
so part of: sequence
location: 473037..474374
location: region:473037-474374:1
so has part: feature:473037-474374:1:exon
subclass of: SO_0000010

9731837
type: Gene
SIO_000068: ncbigene

position:473037:1
position: 473037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474374:1
position: 474374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473037-474374:1:exon

DDA3937_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02125
old locus tag: Dda3937_01325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013812611.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MPARIGAIFAIAFGIAMAVLDGALVNVALPTIAADFNTSPASSIWIVNAYQLAITMTLLSLSSLGDIVGYRRVYLVGLVLFTLMSVVCALADSLPTLTLARILQGLAAAALMSVNTALIRLIYPRDKLGRGMAINSLVVAVSTAAGPTVAAGILGVASWQWLFAINIPFGIVALLLGWRFLPRNDGVRAQRFDAPSALLNALTFGLFFIALGGFAHGQNLWLVLGELALTLLVGGYFFRRQLTQSYPLLPVDLLRIPVFALSMGTSISSFCAQMLAMVSLPFYFQSALGMNEIETGLLLTPWPLAIMAVAPLAGRWLERVNAGVLCTIGLSLFALGLFSLAWLPASPGYLDICLRMVLCGIGFGLFQSPNNHTIISAAPRHRSGGASGMLGTARLVGQTAGAALVALMFNLFGELGTHAALMTAGTFATLAAIVSGQRISRLKTD
SIO_010081: DDA3937_RS02125
subclass of: SO_0000673
so part of: DDA3937_RS02125
location: 473037..474374
location: region:473037-474374:1
so has part: feature:473037-474374:1:exon

WP_042318043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473037-474374:1:exon

DDA3937_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02130
old locus tag: Dda3937_01326
so part of: sequence
location: complement(474337..475821)
location: region:474337-475821:-1
so has part: feature:474337-475821:-1:exon
subclass of: SO_0000010

9731838
type: Gene
SIO_000068: ncbigene

position:474337:-1
position: 474337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475821:-1
position: 475821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474337-475821:-1:exon

DDA3937_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02130
old locus tag: Dda3937_01326
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.5 regulation; type of regulation; transcriptional level; action unknown
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883178.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PLP-dependent aminotransferase family protein
translation: MDFLTRPFSPRPSAPLNQQLYQRIQDAIATGQLHPGERVPSVRSLASELNLARGTVEAAYQRLTSEGYLLPRGPAGTIVSPGLTNLTPGHASASPPPSRPQPEPQNPAILPFQLGLPALDAFPRKTWNRLAGQRLRTLGGDALAYPDPQGCLPLRRAIAAYLGISRGIACSEQQVFITAGYHCSLDLICRSLFTPGDLGWYEDPGYPFARRFLLHAGMQLAPVPVDEAGIDVAAGEQYAGHARFAVVTPTHQSPLGVALSLPRRLALLAWAARRGAWIIEDDYDSEFRYHGRPLPALKSLDSDERVIYTGTFSKVFFPGLRLAYLVVPQTQIPTFQQTAQILHSNGFTLAQATAADFMERGYFARHIRKMRALYARRRGYLQDALTTLAGDKLQLHASAGGMHLLARLPPGGSLDVDIATEAISAGLSIQALSQWRQRPDSTGGLLMGFTNLVSAEQAHQLTQRLCALPSFQHLLSVDGNNLTSPFSAAKSADR
SIO_010081: DDA3937_RS02130
subclass of: SO_0000673
so part of: DDA3937_RS02130
location: complement(474337..475821)
location: region:474337-475821:-1
so has part: feature:474337-475821:-1:exon

WP_013316133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474337-475821:-1:exon

DDA3937_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02135
old locus tag: Dda3937_01327
so part of: sequence
location: 475928..476377
location: region:475928-476377:1
so has part: feature:475928-476377:1:exon
subclass of: SO_0000010

9731839
type: Gene
SIO_000068: ncbigene

position:475928:1
position: 475928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476377:1
position: 476377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475928-476377:1:exon

DDA3937_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02135
old locus tag: Dda3937_01327
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843672.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MADIHLAWASSQTEQLACFSLMQALRPHLTDGEQFVRQVQRQAQHGYRLLAAWQEGMAIGLAGYRLQENLVYGRFLYVDDLVCQADVRGQGIGDRLMQAMYQEAARERCAHLVLDSALSNVLAHRFYFRQGLLARALRFSAPIHCGEVL
SIO_010081: DDA3937_RS02135
subclass of: SO_0000673
so part of: DDA3937_RS02135
location: 475928..476377
location: region:475928-476377:1
so has part: feature:475928-476377:1:exon

WP_033111553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475928-476377:1:exon

DDA3937_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02140
old locus tag: Dda3937_01328
so part of: sequence
location: 476374..476805
location: region:476374-476805:1
so has part: feature:476374-476805:1:exon
subclass of: SO_0000010

9731840
type: Gene
SIO_000068: ncbigene

position:476374:1
position: 476374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476805:1
position: 476805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476374-476805:1:exon

DDA3937_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02140
old locus tag: Dda3937_01328
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883180.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxymuconolactone decarboxylase family protein
translation: MNALRLPYATLSPEAYQGLLMTKKALEKSTLGLELIELVYLRISQINGCAFCLKMHAGWLRGAGVSNEKLDSLAGWRVCTLFSPREQAALAWTESLADVALTHAPDEHFTPLREHFTETEIADLCFAIALMSAFNRLAIGARQ
SIO_010081: DDA3937_RS02140
subclass of: SO_0000673
so part of: DDA3937_RS02140
location: 476374..476805
location: region:476374-476805:1
so has part: feature:476374-476805:1:exon

WP_013316135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476374-476805:1:exon

DDA3937_RS21785
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS21785
old locus tag: Dda3937_01329
pseudo: true
so part of: sequence
location: <476900..477082
location: region:476900-477082:1
so has part: feature:476900-477082:1:exon
subclass of: SO_0000010

30316563
type: Gene
SIO_000068: ncbigene

position:476900:1
position: 476900
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:477082:1
position: 477082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476900-477082:1:exon

DDA3937_RS21785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS21785
old locus tag: Dda3937_01329
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006811003.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MFS transporter
SIO_010081: DDA3937_RS21785
subclass of: SO_0000673
so part of: DDA3937_RS21785
location: <476900..477082
location: region:476900-477082:1
so has part: feature:476900-477082:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:476900-477082:1:exon

DDA3937_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02145
old locus tag: Dda3937_01330
so part of: sequence
location: complement(477142..477765)
location: region:477142-477765:-1
so has part: feature:477142-477765:-1:exon
subclass of: SO_0000010

9731842
type: Gene
SIO_000068: ncbigene

position:477142:-1
position: 477142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477765:-1
position: 477765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477142-477765:-1:exon

DDA3937_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02145
old locus tag: Dda3937_01330
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883181.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4276 family protein
translation: MNVYVEGGGDTNSLRAECRRGFAEFLKKAGLTGTMPRIIACGSRRDAYNSFCIAIRQGTPAMLLVDSEEPVIAVAQQNADPNQWQPWLHLRQRQGDGWEKPAGSDDQQCHLMTQCMESWLIADSITLASFFGQGFRTSLLPQGNVERIAKRQVYDMLENATRSTTKGRYGKGAHSFTLLALIDPAKVQQASPWAQRFITQLRSRMSS
SIO_010081: DDA3937_RS02145
subclass of: SO_0000673
so part of: DDA3937_RS02145
location: complement(477142..477765)
location: region:477142-477765:-1
so has part: feature:477142-477765:-1:exon

WP_013316137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477142-477765:-1:exon

DDA3937_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02150
old locus tag: Dda3937_01331
so part of: sequence
location: complement(477762..478922)
location: region:477762-478922:-1
so has part: feature:477762-478922:-1:exon
subclass of: SO_0000010

9731843
type: Gene
SIO_000068: ncbigene

position:477762:-1
position: 477762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478922:-1
position: 478922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477762-478922:-1:exon

DDA3937_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02150
old locus tag: Dda3937_01331
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883182.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIKSIQLTNFLSFGASTQPIELKALNVIVGPNGSGKSNLLEAIELLRNAPDKLITPIRDGGGVSDWLWKGGQGKPTATLNAVFTNPKGPQSLRYQLSFTEVAQRFEMVDERIENEHPADGHPEPYFYYHFNNARPTLNVKNKKRALQLEDIDLEKSILAQRRDPDQYPEITYLAQELARIRLYREWSFGRYTPPRQPQKADLPNDHLESTSTNLGLVLNRLRRDPLVKQRLLKALQALYDGIDDYDVQIEGGTVQVFFHEGRFTIPATRLSDGTLRYLCLLAVLCHPNPPPLICLEEPELGLHPDVLPTLGALLKEASNRTQLIVTTHSDVLVDAMSDQPDAVLVAEKTLEGTTMTRLDAENLKPWLENYRLGQLWTRGDIGGTRW
SIO_010081: DDA3937_RS02150
subclass of: SO_0000673
so part of: DDA3937_RS02150
location: complement(477762..478922)
location: region:477762-478922:-1
so has part: feature:477762-478922:-1:exon

WP_033111555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477762-478922:-1:exon

DDA3937_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02155
old locus tag: Dda3937_01332
so part of: sequence
location: complement(479045..479836)
location: region:479045-479836:-1
so has part: feature:479045-479836:-1:exon
subclass of: SO_0000010

9731844
type: Gene
SIO_000068: ncbigene

position:479045:-1
position: 479045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479836:-1
position: 479836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479045-479836:-1:exon

DDA3937_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02155
old locus tag: Dda3937_01332
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017374296.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DeoR/GlpR family DNA-binding transcription regulator
translation: MKSKSEQLADMQQRREKILEMVREDGTVTVKMLTETFGLTEATIRTDLRELQKEGYVQRYYGGATLVTGKQNTGAMLLERQINLEEKDAIGRLAAAQIENGDTVIFDSGTTTTAMVEHMADIHRLSVITTAVNIALKLGGEPGINILLTGGTFKFPTLSTSGEKAASFFENVLAEKLFLATAAISPRMGLSFPSETDIKVKSAMIRSAKTVYVVADSSKIGKVSMFALPCDWSNIHYLITDAGISQEAVSAFEALGVTVMVAG
SIO_010081: DDA3937_RS02155
subclass of: SO_0000673
so part of: DDA3937_RS02155
location: complement(479045..479836)
location: region:479045-479836:-1
so has part: feature:479045-479836:-1:exon

WP_033111556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479045-479836:-1:exon

DDA3937_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02160
old locus tag: Dda3937_01333
so part of: sequence
location: 480179..480982
location: region:480179-480982:1
so has part: feature:480179-480982:1:exon
subclass of: SO_0000010

9731845
type: Gene
SIO_000068: ncbigene

position:480179:1
position: 480179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480982:1
position: 480982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480179-480982:1:exon

DDA3937_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02160
old locus tag: Dda3937_01333
function: 1.3.2 metabolism; energy metabolism, carbon; pentose phosphate shunt, oxidative branch
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855186.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transketolase
translation: MDVQTIRQTARQARRYVLQMNHRAGKGHTGADLSEVDIICTLFMAVMDRSQARPNQDRFILSKGHGAGGLYCSAAAMGLLDPAILDQFMGDDTLLAGHPIHQKLPDLVEINSGALGHGLSIGVGLALGNRLAGRSHRRVFVLMGDGELAEGSNWEAAMAASKFRLDNLIAIVDRNRLQLAGKTEDIMPLEPLEDKWRAFGFDVHHCDGHDPQAIIHAVEAPSVGKPRVILANTEKGHGISFMANVPAWHHAVPNDEQLAQGLAELED
SIO_010081: DDA3937_RS02160
subclass of: SO_0000673
so part of: DDA3937_RS02160
location: 480179..480982
location: region:480179-480982:1
so has part: feature:480179-480982:1:exon

WP_013316140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480179-480982:1:exon

DDA3937_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02165
old locus tag: Dda3937_01334
so part of: sequence
location: 480985..481905
location: region:480985-481905:1
so has part: feature:480985-481905:1:exon
subclass of: SO_0000010

9731846
type: Gene
SIO_000068: ncbigene

position:480985:1
position: 480985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481905:1
position: 481905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480985-481905:1:exon

DDA3937_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02165
old locus tag: Dda3937_01334
function: 1.5.3 metabolism; building block biosynthesis; cofactor, small molecule carrier
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013316141.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transketolase C-terminal domain-containing protein
translation: MQDLRDAVVAALLEEQNAGANLCVVVADSTSTSKIAPFEKAFPERVVNVGIAEQNMVGMATGLSLSGPTVFTANAAPFLLARSNEQVKNDVCYTDANVKMLGLNAGFAYGPLGATHHCMNDIAIARSFGNLQIFAPADAVQASAIVRYAIRHRGPVYIRMDSDKVPVLHEADWSLTPGKPEVVQQGSDVVVFCLGTMVHEALAAATDATIVSLPSLWPLDEMSLLKIISEHQYVISMEEHVLSGGLGSIIGELLHKHHARQRFTALGVPPYEFTHSSSRSALRRQFHIDAAGLRLTLEQLALRTIA
SIO_010081: DDA3937_RS02165
subclass of: SO_0000673
so part of: DDA3937_RS02165
location: 480985..481905
location: region:480985-481905:1
so has part: feature:480985-481905:1:exon

WP_013316141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480985-481905:1:exon

DDA3937_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02170
old locus tag: Dda3937_01335
so part of: sequence
location: 481919..482722
location: region:481919-482722:1
so has part: feature:481919-482722:1:exon
subclass of: SO_0000010

9731847
type: Gene
SIO_000068: ncbigene

position:481919:1
position: 481919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482722:1
position: 482722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481919-482722:1:exon

DDA3937_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02170
old locus tag: Dda3937_01335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883186.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-threitol dehydrogenase
translation: MSHDNEYDVNLRYGVDTDLSLSDKVAVVTGGLGGIAMASNEMLLAKGARLALLYPAFERDKAAQAAERFDPTRVLLVECDVTTPAEVERAFAAVEAHYGRIDILINCAGYVMLQPVLETDFDEWQKQIAVNLTGPFLCSQAAARHMVAAGHGGKIINIASQAASIAIDNHVAYTSAKAGLLGMTKVMAKELAPHRINVNTLSPTVVLTPMGEKAWRGEKGEAMKKLIPLGRFAYTDEIAAAVLFFASNGSDMITGADLMIDGGFTIW
SIO_010081: DDA3937_RS02170
subclass of: SO_0000673
so part of: DDA3937_RS02170
location: 481919..482722
location: region:481919-482722:1
so has part: feature:481919-482722:1:exon

WP_033111557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481919-482722:1:exon

DDA3937_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02175
old locus tag: Dda3937_01336
so part of: sequence
location: 482815..483750
location: region:482815-483750:1
so has part: feature:482815-483750:1:exon
subclass of: SO_0000010

9731848
type: Gene
SIO_000068: ncbigene

position:482815:1
position: 482815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483750:1
position: 483750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482815-483750:1:exon

DDA3937_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02175
old locus tag: Dda3937_01336
function: 4.3.A.1.p transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, periplasmic binding component
function: 7.2 location of gene products; periplasmic space
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005225731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-ribose ABC transporter substrate-binding protein
translation: MKLRSMLLTAAITSALSLTAHAAEKGTIMILVNSLDNPYYASEAKGADKKAQELGYNTTVLSHGEDVKKQSELIDAAIGKKVQGIVLDNADSTASVAAIKKAKSAGIPVVLINREIPVDDVALVQITHNNFQAGSDVANVFVGKMGEKGKYAELTCSLADNNCVTRSKSFHQVLDQYPEMTSVARQDAKGTLLDGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAAGRNDVVVVGIDGSNDERDAVKEGSLKATVMLQAQAIAAQGVTDLDNYLRKGEKPAKQRVMFRGILITPENANKVQDFNFKS
SIO_010081: DDA3937_RS02175
subclass of: SO_0000673
so part of: DDA3937_RS02175
location: 482815..483750
location: region:482815-483750:1
so has part: feature:482815-483750:1:exon

WP_013316143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482815-483750:1:exon

DDA3937_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02180
old locus tag: Dda3937_01337
so part of: sequence
location: 483794..484426
location: region:483794-484426:1
so has part: feature:483794-484426:1:exon
subclass of: SO_0000010

9731849
type: Gene
SIO_000068: ncbigene

position:483794:1
position: 483794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484426:1
position: 484426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483794-484426:1:exon

DDA3937_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02180
old locus tag: Dda3937_01337
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883188.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2291 domain-containing protein
translation: MSKRSRPLWLALAVLGLGGCRIVSQQELADLKHPPNPHMANLGDTWRQHIVPQVVREARPVAALMKDVQASSDMDAACKQFGYRSQQENPCVFTVRVTGTVVSIDTASRNGKMVVRDDSAGNVTVQLGPTIRGTDLRDAYRGASYQDFNDQVLYGDFGRAINQQALAMIQAAHPKTGERLDVVGVFSSWDIPQAVPDITPAQITRDDKGG
SIO_010081: DDA3937_RS02180
subclass of: SO_0000673
so part of: DDA3937_RS02180
location: 483794..484426
location: region:483794-484426:1
so has part: feature:483794-484426:1:exon

WP_013316144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483794-484426:1:exon

DDA3937_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02185
old locus tag: Dda3937_01338
so part of: sequence
location: 484477..486036
location: region:484477-486036:1
so has part: feature:484477-486036:1:exon
subclass of: SO_0000010

9731850
type: Gene
SIO_000068: ncbigene

position:484477:1
position: 484477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486036:1
position: 486036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484477-486036:1:exon

DDA3937_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02185
old locus tag: Dda3937_01338
EC number: 7.5.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843679.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter ATP-binding protein
translation: MVTTAPPTPTPAADAGAAPEVIIETRNLSRVYPGVTALDEVNYRVYRNKVNVLIGENGAGKSTMMKMLAGVETPSSGQILLDGKPVTLGSTHQAERQGISIIFQELNLFPNMNVMDNIFIANEFFQRGVINETFQYALAKTLLERLELDIDPYTPLGELGIGHQQLVEIARALSKDTRVLIMDEPTSALSQSEVKVLFGVIEQLKRRGVTIIYISHRLEELMEIGDHITIFRDGRFICEREVRHASVPWIIEQMVGDKKKHFDYQPAPQGDTVLTVAGLTALHPSGGYRLHDVSFNLRKGEVVGIYGLLGAGRTELFKGLIGLMPCQQGSVQLNDDCLDGLGFRQRLEKGIALVPEDRQGEGMVQLMSVRANMTLSAFSLRGFWRAWAWLREPDEAKQVDEMVRQLAVKVSDDELPITSLSGGNQQKVVLGKALMTRPQVVLLDEPTRGIDVGAKTDVYHLIGRMAQQGLSVMFSSSELDEVMALADRILVMADGRITADLPRSQVTREILISASTPHD
SIO_010081: DDA3937_RS02185
subclass of: SO_0000673
so part of: DDA3937_RS02185
location: 484477..486036
location: region:484477-486036:1
so has part: feature:484477-486036:1:exon

WP_042318721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484477-486036:1:exon

DDA3937_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02190
old locus tag: Dda3937_01339
so part of: sequence
location: 486053..487120
location: region:486053-487120:1
so has part: feature:486053-487120:1:exon
subclass of: SO_0000010

9731851
type: Gene
SIO_000068: ncbigene

position:486053:1
position: 486053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487120:1
position: 487120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486053-487120:1:exon

DDA3937_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02190
old locus tag: Dda3937_01339
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 7.3 location of gene products; inner membrane
function: 6.1 cell structure; membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883190.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSQKYTLYMYLLKARTFIALLIVVVFFSLMVPNFLTPSNLLIMTQHVAITGLLAIGMTLVILTGGIDLSVGAVAGICGMVAGALLTNGIPLWGGNVLFLNVPEVILTVAVLGMAIGLVNGVVITRLVVAPFICTLGMMYVARGVALLFNDGSTYANLNGMPALGNTGFAFLGSGTLLGIYLPIWLMLAFLLLGLYLTRKTPLGRYIYAIGGNESAARLAGVPIVNVKIFVYAFSGLCAALVGLVVASQLQTAHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMVIKGVVIVTAVVIDQFQQRLQNKVVTMRRHEKKQAVNPLSEVSHV
SIO_010081: DDA3937_RS02190
subclass of: SO_0000673
so part of: DDA3937_RS02190
location: 486053..487120
location: region:486053-487120:1
so has part: feature:486053-487120:1:exon

WP_013316146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486053-487120:1:exon

DDA3937_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02195
old locus tag: Dda3937_01340
so part of: sequence
location: 487113..488624
location: region:487113-488624:1
so has part: feature:487113-488624:1:exon
subclass of: SO_0000010

9731852
type: Gene
SIO_000068: ncbigene

position:487113:1
position: 487113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488624:1
position: 488624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487113-488624:1:exon

DDA3937_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02195
old locus tag: Dda3937_01340
EC number: 2.7.1.-
function: 1.7.6 metabolism; central intermediary metabolism; glycerol metabolism
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843680.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FGGY-family carbohydrate kinase
translation: MSRDLIVALDEGTSNVKAVAIDAGGRVLARASRPLGLITPRAGWVEQDGEALLAGSFAVVREVMEQVGAERVAALAVSNQRETAIGWQRDTGRPLSAALSWQCSRSAPFCEQLRRDQQEAAIRAATGLPVAPLFSGSKMRWLLDNTPDGHARAARGEICLGTIDAWLLWHLTGGRQFRCDLSNAARTQLLNLHRLQWDDAMLALFGIPRAALPELMPSAGEFGVTCGVPGVADGIPILAMAGDSHAALYGHGLGRLGGVKATYGTGSSVMAPLGAPDTRITTLATTVAWHDGERAVYALEGNIPHTGDGVAWMLQATGLNRLPEAELAGALQTLPAGIDSTDGVYFVPALTGAGAPWWNDRARGVMCGLSRGSGQAHLVRAALEAIAYQIADVVAAMRQHPDFHLDRLMVDGGPTRNAWLMQFQADLLGCPVARSTTTELSALGAGLLARRVLGSLDDEQLARLLPTHDSWLPDDARHQRYQANWQGWQAAVRRTLWQADLNG
SIO_010081: DDA3937_RS02195
subclass of: SO_0000673
so part of: DDA3937_RS02195
location: 487113..488624
location: region:487113-488624:1
so has part: feature:487113-488624:1:exon

WP_013316147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487113-488624:1:exon

DDA3937_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02200
old locus tag: Dda3937_01341
so part of: sequence
location: 488635..489432
location: region:488635-489432:1
so has part: feature:488635-489432:1:exon
subclass of: SO_0000010

9731853
type: Gene
SIO_000068: ncbigene

position:488635:1
position: 488635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489432:1
position: 489432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488635-489432:1:exon

DDA3937_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02200
old locus tag: Dda3937_01341
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005225726.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MQRDFYDKTVVITGACRGIGAGIAERFARDGANLVMVSNSERVMSTAQEIQHRYGADVLPLVADVTEEAQVQDVYQQAAARFGPIDVSVQNAGVITIDYFDRMPKADFERVLAVNTTGVWLCCREAAKYMVKQQRGCLINTSSGQGRQGFIYTPHYAASKMGVIGITQSLAQELAPWNITVNAFCPGIIDSEMWDYNDRVWGEILSTDDKRYGKGELMAEWVQGIPLKRAGKPEDVAGLVAFLASDDARYITGQTINVDGGLIMS
SIO_010081: DDA3937_RS02200
subclass of: SO_0000673
so part of: DDA3937_RS02200
location: 488635..489432
location: region:488635-489432:1
so has part: feature:488635-489432:1:exon

WP_033111559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488635-489432:1:exon

DDA3937_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02205
old locus tag: Dda3937_01342
so part of: sequence
location: complement(489535..490194)
location: region:489535-490194:-1
so has part: feature:489535-490194:-1:exon
subclass of: SO_0000010

9731854
type: Gene
SIO_000068: ncbigene

position:489535:-1
position: 489535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490194:-1
position: 490194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489535-490194:-1:exon

DDA3937_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02205
old locus tag: Dda3937_01342
function: 5.6.3 cell processes; protection; cell killing
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855168.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-1Aa cytolytic delta-endotoxin
translation: MYITDDLHPTIYNSPIVLNVTPAPAMLRGYALQAEQDQSLHFKTLFSVDAKYIPQSFAISRVFQNALTSSLSFDTPKAINVANAAGLTIEQVINSHIASDSPEKTIAQVSDHIDSVIGGSLSASLKNQIIDTIKTGFLNLHRNSESAWIFWSKESGSSTSYSYNLLFAIQQNQKLIAIPLGMLVNVDVSEEKVLFITISSHAYYAVNLDGLKVSQPLSG
SIO_010081: DDA3937_RS02205
subclass of: SO_0000673
so part of: DDA3937_RS02205
location: complement(489535..490194)
location: region:489535-490194:-1
so has part: feature:489535-490194:-1:exon

WP_013316149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489535-490194:-1:exon

DDA3937_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02210
old locus tag: Dda3937_01343
so part of: sequence
location: complement(490266..490877)
location: region:490266-490877:-1
so has part: feature:490266-490877:-1:exon
subclass of: SO_0000010

9731855
type: Gene
SIO_000068: ncbigene

position:490266:-1
position: 490266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490877:-1
position: 490877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490266-490877:-1:exon

DDA3937_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02210
old locus tag: Dda3937_01343
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015847956.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-1Ba cytolytic delta-endotoxin
translation: MSIEIYPDDGNTLPYQVFLNLENEHYYAQAIQLAQLFAHEVDDNGQLDLAKALKKAQAQPDLAIIATNNMTLKKSFSTLSALTTTLSEQLKIEGVLGISQDTYIQNILSHAFCDLETQKDKPWFHINAQPDAGHSVTSYSYSLFIVSQGEETGAMMAAGPLIITVTPNTAISDIFNTKDWRLTLQKEEITIGVKGFQVVTPLG
SIO_010081: DDA3937_RS02210
subclass of: SO_0000673
so part of: DDA3937_RS02210
location: complement(490266..490877)
location: region:490266-490877:-1
so has part: feature:490266-490877:-1:exon

WP_013316150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490266-490877:-1:exon

DDA3937_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02215
old locus tag: Dda3937_01344
so part of: sequence
location: complement(490991..491590)
location: region:490991-491590:-1
so has part: feature:490991-491590:-1:exon
subclass of: SO_0000010

9731856
type: Gene
SIO_000068: ncbigene

position:490991:-1
position: 490991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491590:-1
position: 491590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490991-491590:-1:exon

DDA3937_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02215
old locus tag: Dda3937_01344
function: 5.6.3 cell processes; protection; cell killing
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015847955.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-2Aa cytolytic delta-endotoxin
translation: MNNIALNPTNTADESKNFSVTLNVDLKNVDQAMNMASIFNEACLPQEGINFEKALSLAKSHDTLAVVGTHTVKGNSNVSQVWVAIDQLQNLIRMVQGAATENWMAFGIAAKAFIDLNAQKNGNYFTIFSEQSNTLHYQYNMFDVTQNETTGSVMVGQLTSVEITITKASANVLALVAGSSITQKMNFKSMVIVEALTAE
SIO_010081: DDA3937_RS02215
subclass of: SO_0000673
so part of: DDA3937_RS02215
location: complement(490991..491590)
location: region:490991-491590:-1
so has part: feature:490991-491590:-1:exon

WP_013316151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490991-491590:-1:exon

DDA3937_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02220
old locus tag: Dda3937_01345
so part of: sequence
location: complement(491661..492296)
location: region:491661-492296:-1
so has part: feature:491661-492296:-1:exon
subclass of: SO_0000010

9731857
type: Gene
SIO_000068: ncbigene

position:491661:-1
position: 491661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492296:-1
position: 492296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491661-492296:-1:exon

DDA3937_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02220
old locus tag: Dda3937_01345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: delta-endotoxin CytB
translation: MKFDNIVVLNSNEILAKDSNLDLNFNTLFQMPTKYVGQAIAMSRVFQDAINGDDLEFNFDKAIGLVKQHPEMAIIGTINQSIVKQNNQVSAMVDDVMKLLDTVVGVVLDKESPTYKKFANTIEQGFTNLDAQKESKWIFWNKESESKTTYTYNILFAIANQDTGSVMAAAPIGLTITVDVDKQQVLWITTKDKHNYSVNVKSITVVEALKS
SIO_010081: DDA3937_RS02220
subclass of: SO_0000673
so part of: DDA3937_RS02220
location: complement(491661..492296)
location: region:491661-492296:-1
so has part: feature:491661-492296:-1:exon

WP_022631961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491661-492296:-1:exon

DDA3937_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02225
old locus tag: Dda3937_01346
so part of: sequence
location: 492891..494423
location: region:492891-494423:1
so has part: feature:492891-494423:1:exon
subclass of: SO_0000010

9731858
type: Gene
SIO_000068: ncbigene

position:492891:1
position: 492891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494423:1
position: 494423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492891-494423:1:exon

DDA3937_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02225
old locus tag: Dda3937_01346
function: 4.3.A.1.p transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, periplasmic binding component
function: 7.2 location of gene products; periplasmic space
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855164.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MTHQLARQIYQYLLMALLLGGTTYSYAGKQNDTLVYASDSEVENVSPYHNNMREGVILAHLAWDTLIYRDPKTGEYKGELATDWKWESPVVLLLHLRKGVTFHNGDSFSADDVVYTFQSIAGPNTASVIPQSVDWIDHAEKVDDYTVRLHLKKPFPAALEYLSGPTPIYPAKYFQQVKLEGFSKAPVGTGPYKIVKVTPGQGVSMVKNPDYFKDSPIGQPKIGKLQFVVIRDPEARVAQLMTGQVDWIWRVASDQVDSLSAMPNIAVKSGETMRVGFLELNTNASGPEGAPFKDLRVRQAINYAINRQAMVDNLVRGGSKPVYSACFRTQTACDASQVIQYPYDPAKAKQLLAEAGYANGFDTDLWAYRERDYAEAIIGDLRKVGIRARLHFVQYPVMASALASGQAPLAFSTWGSFSINDATAFVTPYFGGKGSDIWKDPQVIAELAKADEVVEPQQRAALYAALLGRISAQAYMAPLFSYSTHYAFTSDLNFQDWPDELPRFAEASWK
SIO_010081: DDA3937_RS02225
subclass of: SO_0000673
so part of: DDA3937_RS02225
location: 492891..494423
location: region:492891-494423:1
so has part: feature:492891-494423:1:exon

WP_013316153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492891-494423:1:exon

DDA3937_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02230
old locus tag: Dda3937_01347
so part of: sequence
location: 494470..495387
location: region:494470-495387:1
so has part: feature:494470-495387:1:exon
subclass of: SO_0000010

9731859
type: Gene
SIO_000068: ncbigene

position:494470:1
position: 494470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495387:1
position: 495387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494470-495387:1:exon

DDA3937_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02230
old locus tag: Dda3937_01347
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883194.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MVKYVFHRLLVALAVLFTVAAVSFSLLHLSGDLATAIAGPDATAETIAQIRVQNGLDKPLLTQFSSWMWSALQLDFGRSFYFENTVMELVGQRMPVTLKLGGVSLLLALVLAIPLGVLAAVFRDTWVDRLAMLVSVIGQAMPNFWFALVLILIFAVGLKWLPVAGNASWQNFVLPAVALGYYAMPSLMRLTRSGMLDVLGSDYIRTARAKGLSAFKVVVKHGLRNAIIPVVALATVELGFMLGGSVVIESVFSLQGLGQLAWDSISRNDFPVVQAIVLIIAVFYIGLTFLADVLNAALDPRLRSK
SIO_010081: DDA3937_RS02230
subclass of: SO_0000673
so part of: DDA3937_RS02230
location: 494470..495387
location: region:494470-495387:1
so has part: feature:494470-495387:1:exon

WP_013316154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494470-495387:1:exon

DDA3937_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02235
old locus tag: Dda3937_01348
so part of: sequence
location: 495397..496323
location: region:495397-496323:1
so has part: feature:495397-496323:1:exon
subclass of: SO_0000010

9731860
type: Gene
SIO_000068: ncbigene

position:495397:1
position: 495397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496323:1
position: 496323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495397-496323:1:exon

DDA3937_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02235
old locus tag: Dda3937_01348
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883195.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MKTAMARLAVMMKPAPQPGLLPEPGPWRRWRRKVLGHHGMTLGLVILGTIILLAVLAPFISPHDPYAQEVSRRLIPPVWHDKGSWEHLLGTDKLGRDYFSRLLFGARVSLTIGLVSVMLAGTIGISLGVLAGYFGGRVDAAVSYLLTVRLSMPVILVALALASLVGGSVKVVIMLLGLLLWDRFLIVSRTVTRQLREAEFIAAAQTLGASSLFIMLREILPNLLGPLTVVATLEIAHAVLLEATLSFLGLGVQPPMPSWGLMVAEGKAYMFFQPWVIVIPGVVLALMVLSINLVGDGLRDVTALDGRN
SIO_010081: DDA3937_RS02235
subclass of: SO_0000673
so part of: DDA3937_RS02235
location: 495397..496323
location: region:495397-496323:1
so has part: feature:495397-496323:1:exon

WP_033111560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495397-496323:1:exon

DDA3937_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02240
old locus tag: Dda3937_01349
so part of: sequence
location: 496350..497399
location: region:496350-497399:1
so has part: feature:496350-497399:1:exon
subclass of: SO_0000010

9731861
type: Gene
SIO_000068: ncbigene

position:496350:1
position: 496350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497399:1
position: 497399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496350-497399:1:exon

DDA3937_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02240
old locus tag: Dda3937_01349
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843685.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MHTTIETTVRANPSAGGPSEGQAEIVLEVKNLRVDLATPRGTLHAVRGIDFSVRRGEMLCLVGESGCGKSMTSLALMDLLPRNAVRRADTLRFRDTDLLSLRPRERTALRGSQMAMIFQEPMTSLNPSFTLGDQLCETLLAHRKVSKAEARERAVYLMDRVGIPMAAERLRQYPHQLSGGLRQRIMIAMALMCGPELIIADEPTTALDVTIQAQILRMLRELQQEFGTAVIFITHDLGVVARIADRVAVMYAGQVVETAPVMELFHQPCHPYTRGLLECIPVAGRTVPGEPLHAIPGVVPSLIGPQHGCAFRNRCSQCRDRCAQDTPYVSVTDQHAVRCVEALMAEEPV
SIO_010081: DDA3937_RS02240
subclass of: SO_0000673
so part of: DDA3937_RS02240
location: 496350..497399
location: region:496350-497399:1
so has part: feature:496350-497399:1:exon

WP_033111561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496350-497399:1:exon

DDA3937_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02245
old locus tag: Dda3937_01350
so part of: sequence
location: 497396..498259
location: region:497396-498259:1
so has part: feature:497396-498259:1:exon
subclass of: SO_0000010

9731862
type: Gene
SIO_000068: ncbigene

position:497396:1
position: 497396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498259:1
position: 498259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497396-498259:1:exon

DDA3937_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02245
old locus tag: Dda3937_01350
function: 4.3.A.1.a transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP binding cytoplasmic component
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943238.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MSQMTEERGRPLPHIPGNDDIALELCALSRVFRLNRGLFSRPGEIRAVDNVSLRIRRGETLGLVGESGCGKSTLAKMLLGLLPPTSGNVLIEGREIDAGDRRELASRIQPIFQDPYSSLNPRRTVADIVEVALRLHNIGTPTQRKQRVREMLDVVGMPERTHGQYPGQLSGGQRQRVAIARALILQPEILICDEPTSALDVSVQAQILNLLLTLKKEFGLTYLFISHNLSVVEYLVDHVAVMRKGTIVEQGTREQVFGAPQHPYTRALLASVLTPEPGLGIPDIGVA
SIO_010081: DDA3937_RS02245
subclass of: SO_0000673
so part of: DDA3937_RS02245
location: 497396..498259
location: region:497396-498259:1
so has part: feature:497396-498259:1:exon

WP_013316157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497396-498259:1:exon

DDA3937_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02250
old locus tag: Dda3937_01351
so part of: sequence
location: 498300..499718
location: region:498300-499718:1
so has part: feature:498300-499718:1:exon
subclass of: SO_0000010

9731863
type: Gene
SIO_000068: ncbigene

position:498300:1
position: 498300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499718:1
position: 499718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498300-499718:1:exon

DDA3937_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02250
old locus tag: Dda3937_01351
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855159.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M20 family metallopeptidase
translation: MTREEMMQAAATYFESGAFRDALARRVACQTESQNADRAPALMGYLTDEMIPQLNQMGFECQVVPNPVAERGPFLLARRIEPDAALTVLTYGHGDVVMGDASRWRSGLSPWTLTPDGNRWYGRGTADNKGQHTINLAALALVLNARGGRLGYNVKLILEMGEECGSPGLEAVCQQYRDWLAADLFIASDGPRVSADRPTLFLGSRGVFNFGLQLTLRDGAHHSGNWGGLLSNPGIRLAHAIGCLVDANGRILVSELLPPPLSASIRRALSDLELGGAPGDPAIDPHWGEPGLNAAEKVYGWNTLDVLAFVTGNPDKPEHAIPSSARAQCHMRYVPGSDVENFAEHIRRRLDACGFEDVAIVKPDNCFEATRIDPDDPWVRWGVDSIERSVGKPAAVLPNFGGGLPNACFLRTLGLPTLWVPHSYPACCQHAPNEHLLADVAREALQIMSGLFWDLAEEGYGVKKLREQHVIV
SIO_010081: DDA3937_RS02250
subclass of: SO_0000673
so part of: DDA3937_RS02250
location: 498300..499718
location: region:498300-499718:1
so has part: feature:498300-499718:1:exon

WP_033111562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498300-499718:1:exon

DDA3937_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02255
old locus tag: Dda3937_04305
so part of: sequence
location: 500096..501028
location: region:500096-501028:1
so has part: feature:500096-501028:1:exon
subclass of: SO_0000010

9731864
type: Gene
SIO_000068: ncbigene

position:500096:1
position: 500096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501028:1
position: 501028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500096-501028:1:exon

DDA3937_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02255
old locus tag: Dda3937_04305
function: 3.1.2 regulation; type of regulation; transcriptional level
function: 7.1 location of gene products; cytoplasm
function: 2.2.2 information transfer; RNA related; transcription related
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015847947.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MHNSEIRYFMAVVNAGSISAASQQLFVAVSAISRQIQRLETRLGMPLFERSTRGMVLNDAGHILANHVRRSMADMELAMAEIEGMKSARQTTLRVVCTDGLAFNLLPALLARFREQHPRVNFYLTVGSARQVPELLRNGECDVALKFSLAPEHGVAVLASFPAPALVFMAQDHPLANRDFQLADLNAWPVVLPDQSATIRQLFDLSCRMNNVFIEPVFTCNHFSALYEYVRTTPGAVSVCSHFSILCSARRDGLTMKAVNLDQLSQRTLQLQTEMGKPRTAILESFFAFLKQALQQYDQQCRQDFGLLLR
SIO_010081: DDA3937_RS02255
subclass of: SO_0000673
so part of: DDA3937_RS02255
location: 500096..501028
location: region:500096-501028:1
so has part: feature:500096-501028:1:exon

WP_013316159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500096-501028:1:exon

DDA3937_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02260
old locus tag: Dda3937_02864
so part of: sequence
location: 501271..502287
location: region:501271-502287:1
so has part: feature:501271-502287:1:exon
subclass of: SO_0000010

9731865
type: Gene
SIO_000068: ncbigene

position:501271:1
position: 501271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502287:1
position: 502287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501271-502287:1:exon

DDA3937_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02260
old locus tag: Dda3937_02864
EC number: 3.5.99.7
function: 1.1.4 metabolism; carbon utilization; amines
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010466243.1
GO function: GO:0008660 - 1-aminocyclopropane-1-carboxylate deaminase activity [Evidence IEA]
GO process: GO:0042217 - 1-aminocyclopropane-1-carboxylate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1-aminocyclopropane-1-carboxylate deaminase
translation: MNLEKFPRYPLTFGPSPITPMKRLSEYLGGDVEIYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGCDTLVSIGGVQSNQTRQVAAVAAHLGMKCILVQENWVNYADAVYDRVGNIELSRIMGADVRLDPAGFDIGIRASWQQAMEEAAQNGGKPFPIPAGCSEHPYGGLGFVGFAEEVRQQEKELGFKFDYIVVCSVTGSTQAGMVVGFAADGRARNVIGIDASAKPEKTKAQILRIAQNTAGLVELGRDITEEDVVLDTRYGGPEYGLPNDGTLEAIRLCARLEGVLTDPVYEGKSMHGMIDMVRNGEFPKGSKVLYAHLGGAPALSAYSYIFRNG
SIO_010081: DDA3937_RS02260
subclass of: SO_0000673
so part of: DDA3937_RS02260
location: 501271..502287
location: region:501271-502287:1
so has part: feature:501271-502287:1:exon

WP_013316160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501271-502287:1:exon

DDA3937_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02265
old locus tag: Dda3937_02865
so part of: sequence
location: 502871..503962
location: region:502871-503962:1
so has part: feature:502871-503962:1:exon
subclass of: SO_0000010

9731866
type: Gene
SIO_000068: ncbigene

position:502871:1
position: 502871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503962:1
position: 503962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502871-503962:1:exon

DDA3937_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02265
old locus tag: Dda3937_02865
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855156.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MKHVTNPDQLSKLLIEGYKSIERCELHMGSLNVLIGANGAGKSNFISFFRLIATLLDQRLQSLVSKAGGPDAMLHFGRKKTPHLKGELYFGNNGYKFELEPTNDNRMMFSREALWWNMGGDKGVVAGHFESRAEEHNTGIKKYTLPIMRRWRVYHFHDTSESARVKQIHRINDNDYLREDGANLAAFLYRLQKNHAAHYKRIVKSIQMVAPFFGDFYLRPTSDNPDTIQLEWTEKEQDVPFKANELSDGSLRFILLATVLLQPEEYKPSAIIVDEPELGLHPYAIAVLAGLIKSASHEHQLIISTQSVELVNEFDAEDLIVVDKKGGASTFKRLESGSLEEWLSDYSLGELWTKNLLGGRPQR
SIO_010081: DDA3937_RS02265
subclass of: SO_0000673
so part of: DDA3937_RS02265
location: 502871..503962
location: region:502871-503962:1
so has part: feature:502871-503962:1:exon

WP_013316161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502871-503962:1:exon

DDA3937_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02270
old locus tag: Dda3937_02866
so part of: sequence
location: 503959..504612
location: region:503959-504612:1
so has part: feature:503959-504612:1:exon
subclass of: SO_0000010

9731867
type: Gene
SIO_000068: ncbigene

position:503959:1
position: 503959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504612:1
position: 504612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503959-504612:1:exon

DDA3937_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02270
old locus tag: Dda3937_02866
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015847944.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4276 family protein
translation: MIRVNIFVEGQTEETFVRDVLAPAFAYQQIYFTPILAQTSRGYKGGIVSYGKVKHQIERLCKQDPQAWVTTMIDYYGLPTDFPGLDENPAQHADIYVRIARLEQAFKQDINLPNFLANFIVHEYEALLFCQPEKFIDWIDDETPVKKLLAMKAEFPTPEQINNSPQTAPSKRILATIPTYKKTLHGPLIAADIGLDSMRQQCPHFHSWLQRIEALAD
SIO_010081: DDA3937_RS02270
subclass of: SO_0000673
so part of: DDA3937_RS02270
location: 503959..504612
location: region:503959-504612:1
so has part: feature:503959-504612:1:exon

WP_033111563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503959-504612:1:exon

DDA3937_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02275
old locus tag: Dda3937_02867
so part of: sequence
location: complement(504657..505160)
location: region:504657-505160:-1
so has part: feature:504657-505160:-1:exon
subclass of: SO_0000010

9731868
type: Gene
SIO_000068: ncbigene

position:504657:-1
position: 504657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505160:-1
position: 505160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504657-505160:-1:exon

DDA3937_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02275
old locus tag: Dda3937_02867
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883202.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lrp/AsnC ligand binding domain-containing protein
translation: MKTKTTAADGPDDKNANLDRFDLAILRYLQSDASISNVALAEKVKLSAPACLRRVERLKQVGLIKGYVALLNPQALNVGMVVLIGVVLDRSTPKSFEDFEAAVQKISGCMECHVVTGEFDYILMIRTKDNQSFNKLHAEQLLFLPGVRQIRSFIGLREVLSTTQLVF
SIO_010081: DDA3937_RS02275
subclass of: SO_0000673
so part of: DDA3937_RS02275
location: complement(504657..505160)
location: region:504657-505160:-1
so has part: feature:504657-505160:-1:exon

WP_033111564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504657-505160:-1:exon

DDA3937_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02280
old locus tag: Dda3937_02868
so part of: sequence
location: complement(505344..505874)
location: region:505344-505874:-1
so has part: feature:505344-505874:-1:exon
subclass of: SO_0000010

9731869
type: Gene
SIO_000068: ncbigene

position:505344:-1
position: 505344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505874:-1
position: 505874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505344-505874:-1:exon

DDA3937_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02280
old locus tag: Dda3937_02868
EC number: 5.4.99.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855152.1
GO process: GO:0046417 - chorismate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chorismate mutase
translation: MLRTMCLVACLISTNALAAESAYLASLVNQRLGYMKDVAGYKAAHHLAIEDLQQEDNVLKASRQQATQYGLDADSVTPFIQAQMDAAKAIQYRYRADWLAVPEKDWQPRSLDEVRAQIAKLNGVLLQQLADTLHKQGGSLSHLNHAAFMHAVTQKNLSEHDKARLFTTLKQAKLQN
SIO_010081: DDA3937_RS02280
subclass of: SO_0000673
so part of: DDA3937_RS02280
location: complement(505344..505874)
location: region:505344-505874:-1
so has part: feature:505344-505874:-1:exon

WP_033112197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505344-505874:-1:exon

DDA3937_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02285
old locus tag: Dda3937_02869
so part of: sequence
location: complement(506258..507490)
location: region:506258-507490:-1
so has part: feature:506258-507490:-1:exon
subclass of: SO_0000010

9731870
type: Gene
SIO_000068: ncbigene

position:506258:-1
position: 506258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507490:-1
position: 507490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506258-507490:-1:exon

DDA3937_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02285
old locus tag: Dda3937_02869
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843690.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MSPVLLFFLALVFIADGLMVFLIPVLVYAETQSLTYSGLAYALWWLPRIVLIPALGALIDRWGVRPVSIASDAVKAFGCLLLCLVLNFAEQPLTLALACGLLGAAVSIGNAQTLTAVEKLIAAHSRHIDRDANLLTRLDLLGMVLGPLIGILLYEYGFLTLLYIAATFYLCNAYYFLTSRLFSFTPDPAPENKVNPPHPAQKKLFPLLMIIRSPFIILMIVLAAGNNMFDGLVESAGAALIETQMGLSVKYFGFIDICAGAAGFLSTLVYGAALNRLSREALLAAGLGLIVIASLLLTTTLDHLGPFLTFYALGIVGKVFTGNIMRTLRLTLIPYERLASVSSLILMLNQSVLPLMGLFLFLSERYGWPLTGFMHIAIALSLLAGIGLLLALRRKLTDTSLSSPRPDHSG
SIO_010081: DDA3937_RS02285
subclass of: SO_0000673
so part of: DDA3937_RS02285
location: complement(506258..507490)
location: region:506258-507490:-1
so has part: feature:506258-507490:-1:exon

WP_033111565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506258-507490:-1:exon

DDA3937_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02290
old locus tag: Dda3937_02870
so part of: sequence
location: 507907..508617
location: region:507907-508617:1
so has part: feature:507907-508617:1:exon
subclass of: SO_0000010

9731871
type: Gene
SIO_000068: ncbigene

position:507907:1
position: 507907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508617:1
position: 508617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507907-508617:1:exon

DDA3937_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02290
old locus tag: Dda3937_02870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015847938.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MDLLGFEQALSQYVARYLADSVDSAHDHHHLVRVANSARHIQRTEGGDLRVIIAAAWLHDIVLIPKNHPDRSRASRMAAEEAVRILSLDFPDFPYALYPALFHAVEAHSFSAGITAQTLEAKIVQDADRLDSLGALGLARVFYVAGMMGRPLFDPQDLFACERELDDRLYTLDHFRVKLMRLPETMNTAEGKRIAEANASWLVDFLAKLAGEVNGDPTLLDPQVRARFSDWHPWLA
SIO_010081: DDA3937_RS02290
subclass of: SO_0000673
so part of: DDA3937_RS02290
location: 507907..508617
location: region:507907-508617:1
so has part: feature:507907-508617:1:exon

WP_033111566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507907-508617:1:exon

DDA3937_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02295
old locus tag: Dda3937_02871
so part of: sequence
location: 508743..509549
location: region:508743-509549:1
so has part: feature:508743-509549:1:exon
subclass of: SO_0000010

9731872
type: Gene
SIO_000068: ncbigene

position:508743:1
position: 508743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509549:1
position: 509549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508743-509549:1:exon

DDA3937_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02295
old locus tag: Dda3937_02871
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2 regulation; type of regulation; transcriptional level
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015847937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator
translation: MRTASHGHDKPAGNQSLLRGFLLLEILSNYPNGCPLAHLAGLARLNKSTVHRLLQGLQACGYVTPAPAAGSYRLTTRFITVGLTSLAPPEVIRLIAPPLQALNAATGETVNFSRRDGDYCILIHKLEPTTGMLRTRAYLGQQMTLFSSAMGKLFLADDTKDALFSYWGRHQPHIRKLTPYTITDPGHMARELEDVRQRGVAFDREEHEVGVSCMAAPVFDAHQRVNYAISLSLSSAKLRQIDEETLLTPLRQTADALTQALKTLPDDM
SIO_010081: DDA3937_RS02295
subclass of: SO_0000673
so part of: DDA3937_RS02295
location: 508743..509549
location: region:508743-509549:1
so has part: feature:508743-509549:1:exon

WP_013316167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508743-509549:1:exon

DDA3937_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02300
old locus tag: Dda3937_02872
so part of: sequence
location: complement(509628..511217)
location: region:509628-511217:-1
so has part: feature:509628-511217:-1:exon
subclass of: SO_0000010

9731873
type: Gene
SIO_000068: ncbigene

position:509628:-1
position: 509628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511217:-1
position: 511217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509628-511217:-1:exon

DDA3937_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02300
old locus tag: Dda3937_02872
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883207.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MKKFSQLTVFSKLLFGFSVLIVMMLLIGAVSIYQLSANNGRIDAYRDSRLPGVRYTLEMRGVLSELRLQQIQYISSKTPDEREGHRKELLQNQDVFLNAQANYAKLVKSDAQDKQALFSQVTDNFKNFVDVNAKVIDAVNSEKLDDASKISGAVSAKYRTQLMKDLAKLVEMEIASGDQAAVESAEGYRTALYILSGLLLLAVIATGIIATLIARNLSRQLGGEPAYAASIMNQIAAGNLNTSIMLRAGDTQSMLATMKNMNEKLADIIHNIVNGSESISLAASEIAQGNSDLSQRTEEQAASLVQTSSNMQQITETVKRNADNAHQASELARQTSQTAVHGGNVVDDMLKRMHEISDSSQKIVDIISVIEGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRNLAQKSANAAKEIKTLIEGTVEKITDGSRHADTASQAMDEIVSSVTKVTDIVAEISMASNEQHQGIKEIGVAIDQMDRVTQQNAALVEQAATAAQSMTEQGEQLRDSVRFFRLEAQQSTLRLG
SIO_010081: DDA3937_RS02300
subclass of: SO_0000673
so part of: DDA3937_RS02300
location: complement(509628..511217)
location: region:509628-511217:-1
so has part: feature:509628-511217:-1:exon

WP_033111567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509628-511217:-1:exon

DDA3937_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rhaM
locus tag: DDA3937_RS02305
old locus tag: Dda3937_02873
so part of: sequence
location: complement(511778..512092)
location: region:511778-512092:-1
so has part: feature:511778-512092:-1:exon
subclass of: SO_0000010

9731874
type: Gene
SIO_000068: ncbigene

position:511778:-1
position: 511778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512092:-1
position: 512092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511778-512092:-1:exon

DDA3937_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rhaM
locus tag: DDA3937_RS02305
old locus tag: Dda3937_02873
EC number: 5.1.3.32
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012133904.1
GO function: GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
GO process: GO:0019301 - rhamnose catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-rhamnose mutarotase
translation: MLKKAFVMQVFPDCHEEYQRRHSPIWPELEAELKAHGAHHYSIFLDPARNLLFAYVEIESEERWNAIAQTDACQRWWKYMKEVMPANPDNSPVSAELSPVFYLA
SIO_010081: DDA3937_RS02305
subclass of: SO_0000673
so part of: DDA3937_RS02305
location: complement(511778..512092)
location: region:511778-512092:-1
so has part: feature:511778-512092:-1:exon

WP_013316169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511778-512092:-1:exon

DDA3937_RS23400
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS23400
so part of: sequence
location: complement(512161..512337)
location: region:512161-512337:-1
so has part: feature:512161-512337:-1:exon
subclass of: SO_0000010

56705089
type: Gene
SIO_000068: ncbigene

position:512161:-1
position: 512161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512337:-1
position: 512337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512161-512337:-1:exon

DDA3937_RS23400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS23400
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPNEYDNQDTMRAETPSGSLVMVKAGGTLPSRAAGMEHRDVSRRMRATVTVHSDGEQQ
SIO_010081: DDA3937_RS23400
subclass of: SO_0000673
so part of: DDA3937_RS23400
location: complement(512161..512337)
location: region:512161-512337:-1
so has part: feature:512161-512337:-1:exon

WP_158305114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512161-512337:-1:exon

DDA3937_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rhaD
locus tag: DDA3937_RS02310
old locus tag: Dda3937_02874
so part of: sequence
location: complement(512361..513197)
location: region:512361-513197:-1
so has part: feature:512361-513197:-1:exon
subclass of: SO_0000010

9731875
type: Gene
SIO_000068: ncbigene

position:512361:-1
position: 512361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513197:-1
position: 513197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512361-513197:-1:exon

DDA3937_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rhaD
locus tag: DDA3937_RS02310
old locus tag: Dda3937_02874
EC number: 4.1.2.19
function: 1.1.1 metabolism; carbon utilization; carbon compounds
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843695.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhamnulose-1-phosphate aldolase
translation: MQSLLTSWFVQGMVKATGDMWLKGWDERNGGNISLRLTEDDVTPFESDFYPQPRREALSQPMPELAGCWFIVTGSGKFFRNVQLDTADNLVLLQVDDDGRGYRIFWGLSHGGLPTSELAAHFQSHIVRMNVSGGRDRVIMHCHATNLIALSYVLELNSAAFTRELWEGSTECLVVFPDGVGIVPWMVPGTDAIGSATAEQMQHHSLVLWPFHGIFGTGPSLDDAFGLIDTAEKSAEVMVKVRAMGGKKQTISTEELIALGQRFGVTPMESALRYVSGK
SIO_010081: DDA3937_RS02310
subclass of: SO_0000673
so part of: DDA3937_RS02310
location: complement(512361..513197)
location: region:512361-513197:-1
so has part: feature:512361-513197:-1:exon

WP_013316170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512361-513197:-1:exon

DDA3937_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02315
old locus tag: Dda3937_02875
so part of: sequence
location: complement(513221..514477)
location: region:513221-514477:-1
so has part: feature:513221-514477:-1:exon
subclass of: SO_0000010

9731876
type: Gene
SIO_000068: ncbigene

position:513221:-1
position: 513221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514477:-1
position: 514477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513221-514477:-1:exon

DDA3937_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02315
old locus tag: Dda3937_02875
EC number: 5.3.1.14
function: 1.1.1 metabolism; carbon utilization; carbon compounds
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843696.1
GO function: GO:0008740 - L-rhamnose isomerase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO process: GO:0019299 - rhamnose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-rhamnose isomerase
translation: MNTAIETAWLLARERYARLNIDVDAALRQLDQIPVSIHCWQGDDVAGFEQDSGALTGGIQATGNYPGKARNATELRADLEQAFRQIPGPKRLNLHAIYLESDTPVARNAIEPHHFSRWVAWAKEHRLGLDFNPTCFSHPLSSDGFTLSHPDENVRRFWIEHCQASRRISAYFGRELGTASVMNIWIPDGMKDLTVDRLAFRQRLLASLDDVIAEKLDPAHHIDAVESKLFGLGAESFTVGSSEFYLGYATSRQTALCLDAGHFHPTEVISDKISSASLFVPRLLLHVSRPVRWDSDHVVLLDDETQAIAHEVVRHRLFDRVHIGLDFFDASINRIAAWIIGTRNMKKALLRALLEPTDTLRTLEQNGDYTARLALLEEQKSLPWQAVWEHYCQQHDVTPGSDWLQSVRHYENTVLCQR
SIO_010081: DDA3937_RS02315
subclass of: SO_0000673
so part of: DDA3937_RS02315
location: complement(513221..514477)
location: region:513221-514477:-1
so has part: feature:513221-514477:-1:exon

WP_013316171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513221-514477:-1:exon

DDA3937_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rhaB
locus tag: DDA3937_RS02320
old locus tag: Dda3937_02876
so part of: sequence
location: complement(514474..515946)
location: region:514474-515946:-1
so has part: feature:514474-515946:-1:exon
subclass of: SO_0000010

9731877
type: Gene
SIO_000068: ncbigene

position:514474:-1
position: 514474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515946:-1
position: 515946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514474-515946:-1:exon

DDA3937_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rhaB
locus tag: DDA3937_RS02320
old locus tag: Dda3937_02876
EC number: 2.7.1.5
function: 1.1.1 metabolism; carbon utilization; carbon compounds
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943223.1
GO function: GO:0008993 - rhamnulokinase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0019301 - rhamnose catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhamnulokinase
translation: MAVKHYVAVDLGASSGRVMLASLASGTQRLTLEEIHRFSNPLRLWQGHHLWDLDELERQIRHGLEAVDARGVHPVSIGIDSWGVDMVPLDRQGNRLGLSYSYRDHRTDGQMAQVIAELGRERLYRQTGIQFLPFNTLYQLRALRQQDPDVWGQVAHLLMIPDYFHYRLTGRMACEYTNASTTQLLNLDSGDWDRGLLDYLGVPPNWLAAPCQPGHRVGEWIAPSGRAVPVVTVATHDTASAVVATPLTDADSAYLSSGTWSLIGMESREPLTGPAALAANITNEGGVGGRYRVLKNIMGLWLLQRVCQEQQVADLPALLDAAAAQPGFVSLINPNDERLINPPSMSDALRECCREHGQPAPVTTAALARCILDSLALSYRQGLLTLGELRGAPLRHLHVVGGGSRNGLLNQLCADICQVPVLAGPAEASTLGNIGCQLIAQGEVANLDAFRRLLADNIPLQPFIPRQDCDFAGHWRRFQALCQVNEELTV
SIO_010081: DDA3937_RS02320
subclass of: SO_0000673
so part of: DDA3937_RS02320
location: complement(514474..515946)
location: region:514474-515946:-1
so has part: feature:514474-515946:-1:exon

WP_013316172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514474-515946:-1:exon

DDA3937_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rhaS
locus tag: DDA3937_RS02325
old locus tag: Dda3937_02877
so part of: sequence
location: 516326..517162
location: region:516326-517162:1
so has part: feature:516326-517162:1:exon
subclass of: SO_0000010

9731878
type: Gene
SIO_000068: ncbigene

position:516326:1
position: 516326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517162:1
position: 517162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516326-517162:1:exon

DDA3937_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rhaS
locus tag: DDA3937_RS02325
old locus tag: Dda3937_02877
function: RhaS controls the expression of genes involved in rhamnose catabolism
function: 1.1.1 metabolism; carbon utilization; carbon compounds
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.2 regulation; type of regulation; transcriptional level; activator
function: 3.3.1 regulation; genetic unit regulated; operon
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943222.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH-type transcriptional activator RhaS
translation: MTQLHGDEFFASQAATVAVEPRMPQCAFPEHYHDFWEIVLVEQGAGVHVFNDQPFALCSGAVFFVRDNDRHLFEQVEELHLTNVLYRSPRGFRFLSDIAPFLPYGANGEWLGQWQVNVAAQQQVKQLILQLAALARRDQPEDIAASESLFLQILVLLRQKRFQTQGDGSERQGIQALLGWLQHNFCEEVDWDTLADRFSLSLRTLHRQLKQHTGMTPQRYLNRLRLLEARRRLQHSDDSITTIAHDCGFSDSNHFSTQFRKAFALAPKTLRHQAQYED
SIO_010081: DDA3937_RS02325
subclass of: SO_0000673
so part of: DDA3937_RS02325
location: 516326..517162
location: region:516326-517162:1
so has part: feature:516326-517162:1:exon

WP_013316173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516326-517162:1:exon

DDA3937_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: rhaR
locus tag: DDA3937_RS02330
old locus tag: Dda3937_02878
so part of: sequence
location: 517200..518054
location: region:517200-518054:1
so has part: feature:517200-518054:1:exon
subclass of: SO_0000010

9731879
type: Gene
SIO_000068: ncbigene

position:517200:1
position: 517200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518054:1
position: 518054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517200-518054:1:exon

DDA3937_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: rhaR
locus tag: DDA3937_RS02330
old locus tag: Dda3937_02878
function: RhaR controls the expression of genes involved in rhamnose catabolism
function: 1.1.1 metabolism; carbon utilization; carbon compounds
function: 2.2.2 information transfer; RNA related; transcription related
function: 3.1.2.2 regulation; type of regulation; transcriptional level; activator
function: 3.3.1 regulation; genetic unit regulated; operon
function: 7.1 location of gene products; cytoplasm
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843698.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH-type transcriptional activator RhaR
translation: MPSRGLKLRTEDYFLTDKNTVTVAERSPQPAFPLHHHDFDELVIVWRGNGLHLWNDVPYRITCGDLFYVSARDRHSYESVHDLELDNILYIRDRLTLPTDWQNLLPGGEVPQQQRYWRLATHSMDSLRDKVENLTQECMKSDPLSLQLSEVLLLQIALLALRYRYAPGSTQLADAQQLDLLMNALRASIARPFRLEDFCRLHDISMRSLRARFKQQTGMSVAQYLRQLRLCRAMELLRHNRQTISEVAAECGFDDSNYFSVVFHQAFGVTPSGYRQRFQTSGKV
SIO_010081: DDA3937_RS02330
subclass of: SO_0000673
so part of: DDA3937_RS02330
location: 517200..518054
location: region:517200-518054:1
so has part: feature:517200-518054:1:exon

WP_013316174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517200-518054:1:exon

DDA3937_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02335
old locus tag: Dda3937_04306
so part of: sequence
location: complement(518072..518368)
location: region:518072-518368:-1
so has part: feature:518072-518368:-1:exon
subclass of: SO_0000010

9731880
type: Gene
SIO_000068: ncbigene

position:518072:-1
position: 518072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518368:-1
position: 518368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518072-518368:-1:exon

DDA3937_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02335
old locus tag: Dda3937_04306
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843699.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIESKRIIRHFLSIFLFIALFLLAIRYVHTYPVPLTRKQTDLFVALSEKAGWKDPELFYITVMSIIDLIVATLVYVAIIKLWRYYRTSRSARQASSK
SIO_010081: DDA3937_RS02335
subclass of: SO_0000673
so part of: DDA3937_RS02335
location: complement(518072..518368)
location: region:518072-518368:-1
so has part: feature:518072-518368:-1:exon

WP_071819898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518072-518368:-1:exon

DDA3937_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02340
old locus tag: Dda3937_04307
so part of: sequence
location: complement(518418..518687)
location: region:518418-518687:-1
so has part: feature:518418-518687:-1:exon
subclass of: SO_0000010

9731881
type: Gene
SIO_000068: ncbigene

position:518418:-1
position: 518418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518687:-1
position: 518687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518418-518687:-1:exon

DDA3937_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02340
old locus tag: Dda3937_04307
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012303833.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATLARRIFKTLLFTTLFFLSVRYVHTYPIPMPKEQVTLLFKLSAALGIRDPDDLYISSMLIIELITTIAVYILIMKMWRRYNRNAKVD
SIO_010081: DDA3937_RS02340
subclass of: SO_0000673
so part of: DDA3937_RS02340
location: complement(518418..518687)
location: region:518418-518687:-1
so has part: feature:518418-518687:-1:exon

WP_013316176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518418-518687:-1:exon

DDA3937_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02345
old locus tag: Dda3937_04455
so part of: sequence
location: complement(518965..519222)
location: region:518965-519222:-1
so has part: feature:518965-519222:-1:exon
subclass of: SO_0000010

9731882
type: Gene
SIO_000068: ncbigene

position:518965:-1
position: 518965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519222:-1
position: 519222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518965-519222:-1:exon

DDA3937_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02345
old locus tag: Dda3937_04455
function: 0 unknown function
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012123803.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVRDFEDKVWETEGIRIVIHAKDDKDVKDYEYKKAADASWRITELGQKRIDKCLDGNTFSVIQGDGEEPNGRVILRTIRSSYNK
SIO_010081: DDA3937_RS02345
subclass of: SO_0000673
so part of: DDA3937_RS02345
location: complement(518965..519222)
location: region:518965-519222:-1
so has part: feature:518965-519222:-1:exon

WP_013316177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518965-519222:-1:exon

DDA3937_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02350
old locus tag: Dda3937_03674
so part of: sequence
location: complement(519588..521288)
location: region:519588-521288:-1
so has part: feature:519588-521288:-1:exon
subclass of: SO_0000010

9731883
type: Gene
SIO_000068: ncbigene

position:519588:-1
position: 519588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521288:-1
position: 521288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519588-521288:-1:exon

DDA3937_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02350
old locus tag: Dda3937_03674
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843702.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSQSALQPLLRVDGLNVTFPSPHGPVESVRDLSFQVNPGEILALVGESGSGKSVTARTLVGLAGERAQIQANAIELVRHDGSRCDLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQEVAEPLLTHKLASRNDVATRVAELLAQVGIPDPANRAAQYPHELSGGLRQRALIASALAAGPKLLIADEPTTALDATVQQQVLKLFTALAQAGHGVLLITHDLAVVSQVADRVMVMQKGALVERGPARQVLSAPQHPYTRRLLAAIPTAATRSNWLAGENPLSPQASTLLSSVGESGEKSGLALQVDGVSVSFKRPDGSRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVMLALQPPDSGDIRLSGQPWSSLTERERRPLRASIQTITQDPLSSFDPQFTIEQILLQPLRLRRDLSPQARQQRILALLELVGLSPTLLSRRPQSLSGGQRQRISIAQALAAEPEVLICDEPVSALDVTTQAQVLDLLVALQQRLQLTMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQIFNQPQHPYTRQLLSTVAPVVINRQNNDIYA
SIO_010081: DDA3937_RS02350
subclass of: SO_0000673
so part of: DDA3937_RS02350
location: complement(519588..521288)
location: region:519588-521288:-1
so has part: feature:519588-521288:-1:exon

WP_033111568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519588-521288:-1:exon

DDA3937_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02355
old locus tag: Dda3937_03673
so part of: sequence
location: complement(521285..522124)
location: region:521285-522124:-1
so has part: feature:521285-522124:-1:exon
subclass of: SO_0000010

9731884
type: Gene
SIO_000068: ncbigene

position:521285:-1
position: 521285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522124:-1
position: 522124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521285-522124:-1:exon

DDA3937_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02355
old locus tag: Dda3937_03673
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009114605.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MPTPYRTAYRSPWLAPATLLPAAAVLLLLLAVFFPALFTHRLPDEMDMGAVLQPPGADHWFGTDTLGRDVFTRVVYGTSLSLSIGVGAMLIACLGGVLLGTLSALAPLPVRRVLVRLLDIMLAFPEMLLALLVIAVLGRGPENTLLAVGLAGVAGYARLVRSQVLQVKLSGYVEHAVALGEPPLYIVVRHIIPNTLRPLLILATIGVGNAVLSASALSFLGLGVVPPTAEWGALLADGRNFLDIAPWVSLFPASVVALSVIVITLLGRRLQAILARGTA
SIO_010081: DDA3937_RS02355
subclass of: SO_0000673
so part of: DDA3937_RS02355
location: complement(521285..522124)
location: region:521285-522124:-1
so has part: feature:521285-522124:-1:exon

WP_033111569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521285-522124:-1:exon

DDA3937_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02360
old locus tag: Dda3937_03672
so part of: sequence
location: complement(522201..523166)
location: region:522201-523166:-1
so has part: feature:522201-523166:-1:exon
subclass of: SO_0000010

9731885
type: Gene
SIO_000068: ncbigene

position:522201:-1
position: 522201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523166:-1
position: 523166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522201-523166:-1:exon

DDA3937_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02360
old locus tag: Dda3937_03672
function: 4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component
function: 6.1 cell structure; membrane
function: 7.3 location of gene products; inner membrane
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843704.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MMSGLNRNLAVTALQRLFTIVAVLWGAATLTFIAVKLIPGDPVAILSGGDNVVDGAYRAALIKQFGLDQPLWMQYLRYCGQALQGDFGVSYQYRQPVAALIGDAMRETVQLALSALALALLLSILNALLTAGRHARLRALMSWLELTLLSTPVYWVGIVLLSVFSFRLQWFPVMGNDGLISLVLPVITLSLPLAALLSQVLRDGLEEALSQPFALTVRTRGVSETWLRVRHGLRHGALAASTLTGTLLAGVLSGSVLTETVFGRAGIGQITLHAIESRDMPLVLGLVMLSALLFVVINLLVDALYLIIDPRLRKKANAHEQ
SIO_010081: DDA3937_RS02360
subclass of: SO_0000673
so part of: DDA3937_RS02360
location: complement(522201..523166)
location: region:522201-523166:-1
so has part: feature:522201-523166:-1:exon

WP_013316180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522201-523166:-1:exon

DDA3937_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02365
old locus tag: Dda3937_03671
so part of: sequence
location: complement(523144..524772)
location: region:523144-524772:-1
so has part: feature:523144-524772:-1:exon
subclass of: SO_0000010

9731886
type: Gene
SIO_000068: ncbigene

position:523144:-1
position: 523144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524772:-1
position: 524772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523144-524772:-1:exon

DDA3937_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02365
old locus tag: Dda3937_03671
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015847926.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MVTLSPASKASRISLLTAGLLSLAVGASPFAHAADATVTPVQGGTLNIGLGSDTPVIDPSITAYSVAALVARNVVDSLVGQAEDNRFTPWLAERWEISDNNTRYTFHLRKDVTFSDGTKLDAAAIKYNLERILDPKTTSSYAKSLLGPIDSIATPDDNTVVISYKSPFAALLQGLSLPYLGIQSPTYLKNTPNTSNTIVGSGPFILESFVKGSGSRLKKRPDYHWGPGYAAHTGPAYLDKIEFKYLPESSVRLGALSSGQVQAIDAVPPANAAALKKDTRLELITRENPGVNRVLYLNTSKGPFQDVNVRRAFLHAVDAASATKVAFFGTLKAAENILGPSTLYYDKSATALGGFDLKKANQLLDEAGWKTKDGQGYRTKDGKRLTVNFVYSTGSSEAAEITLFQAVQYQVKQAGIDVQLNPVDSGGFISRTNDNDYDIASNYFVRAEPDILRTVFDSNYIPPNGNNFSRTHSLDDKLRKAIGASDAERQQLYSQIQHELLDQAYAVPLFVPAYQLGLSKKVQGISWATNAKPNFYDVWIKP
SIO_010081: DDA3937_RS02365
subclass of: SO_0000673
so part of: DDA3937_RS02365
location: complement(523144..524772)
location: region:523144-524772:-1
so has part: feature:523144-524772:-1:exon

WP_033111570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523144-524772:-1:exon

DDA3937_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02370
old locus tag: Dda3937_03670
so part of: sequence
location: complement(524963..525505)
location: region:524963-525505:-1
so has part: feature:524963-525505:-1:exon
subclass of: SO_0000010

9731887
type: Gene
SIO_000068: ncbigene

position:524963:-1
position: 524963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525505:-1
position: 525505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524963-525505:-1:exon

DDA3937_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02370
old locus tag: Dda3937_03670
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883224.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1440 domain-containing protein
translation: MQARTVKEKIILAVMIGIIAGIICAIAKFGWEIPFPPRTPERDLTNPPQQLLQQLGMSFDLSHITYLFNGNPRPIMSFIMHFGFSITFTVLYCVAAEFWPRIKRWQGAFYGLVLWAVFHVVLLPLFGTVPAPWDQPFAEHFSEIFGHMFCFWVAELARRDLRNRITHQSEDNALTAQHAH
SIO_010081: DDA3937_RS02370
subclass of: SO_0000673
so part of: DDA3937_RS02370
location: complement(524963..525505)
location: region:524963-525505:-1
so has part: feature:524963-525505:-1:exon

WP_013316182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524963-525505:-1:exon

DDA3937_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02375
old locus tag: Dda3937_04456
so part of: sequence
location: 526432..527436
location: region:526432-527436:1
so has part: feature:526432-527436:1:exon
subclass of: SO_0000010

23677389
type: Gene
SIO_000068: ncbigene

position:526432:1
position: 526432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527436:1
position: 527436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526432-527436:1:exon

DDA3937_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02375
old locus tag: Dda3937_04456
function: 8.3.1 extrachromosomal; transposon related; transposases
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315785.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110-like element ISEch4 family transposase
translation: MQNVTLIGIDLGKHSFHVHAQDKNGNALLRKKFSRNQLTAFLSTCTASTVVMESCAGAHFMARHISQFGHQVKLISPQFVRPFVKSNKNDFIDAEAICEAASRPSMRFVTPRTEDQQAMSAFHRVRDTLVRERVKTTNQMHAFLLEFGISMPRGIAIIRRLAVVLEEHELPPYLARLLMRLHQHYACLTEQIKELEQELKIHIAGDDTAQRLLTIPGVGLITASLLATKLGDGKSYASSRDFAASTGLVPRQYSTGGKSTLMGISKRGDKNLRRLLVQCARAFMQRLEHNQGRLADWVKTQLSRHHSNVVACGLANKLARIAWSVTTHRTAFIQ
SIO_010081: DDA3937_RS02375
subclass of: SO_0000673
so part of: DDA3937_RS02375
location: 526432..527436
location: region:526432-527436:1
so has part: feature:526432-527436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:526432-527436:1:exon

DDA3937_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02380
old locus tag: Dda3937_02685
so part of: sequence
location: 527720..528298
location: region:527720-528298:1
so has part: feature:527720-528298:1:exon
subclass of: SO_0000010

9731889
type: Gene
SIO_000068: ncbigene

position:527720:1
position: 527720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528298:1
position: 528298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527720-528298:1:exon

DDA3937_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02380
old locus tag: Dda3937_02685
function: 0 unknown function
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDASLNALAAALAQHRDPRPTIRIYDASLKDNYAGVLKKHYHGVNELIGDERYTYRVSLADGGAVAYGIDNTVSPAPGIVEEKKTPLHDRCYQVITRQISENYFYRTYGVYISPLGFYLGDSVIRERIQEKLGTRPYFAFSLLDQVNGHKVLRGIVEYTDWKNGDGKQQLFEYTYFFAGERVVLRDLRAAP
SIO_010081: DDA3937_RS02380
subclass of: SO_0000673
so part of: DDA3937_RS02380
location: 527720..528298
location: region:527720-528298:1
so has part: feature:527720-528298:1:exon

WP_013316184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527720-528298:1:exon

DDA3937_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
alternative label: visC
gene: ubiI
locus tag: DDA3937_RS02385
old locus tag: Dda3937_02684
gene synonym: visC
so part of: sequence
location: complement(528351..529562)
location: region:528351-529562:-1
so has part: feature:528351-529562:-1:exon
subclass of: SO_0000010

9731890
type: Gene
SIO_000068: ncbigene

position:528351:-1
position: 528351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529562:-1
position: 529562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528351-529562:-1:exon

DDA3937_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
alternative label: visC
gene: ubiI
locus tag: DDA3937_RS02385
old locus tag: Dda3937_02684
gene synonym: visC
EC number: 1.14.13.240
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012104673.1
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent 2-octaprenylphenol hydroxylase
translation: MQSFDVVIAGGGMVGLALACGLQGSGLSVAVLEKQTTTEPLANGPHALRVSAINAASEALLRKLNVWPGIAAQRLSPYNEMYVWDKDSFGNIRFCGEEFGFSRLGHIIENDVIQWALWQQASQSRDITLLAPATLRQVAWGENEAFITLEDGSMLTARLVVGADGAHSWLRQHADIPLTFWDYGHHALVANIRTEQPHGAIASQVFHGDGILAFLPLSDPHLCSIVWSLPPERAQYMRELPADDFVKQLAMTFDMRLGLCQLESDRQTFPLTARYARSFAAHRLVLTGDAAHTIHPLAGQGVNLGFMDVAELIAELKRLQTQGKDIGQHLYLRRYERRRKHSAALMLASMQGFRTLFAASHPVGGLLRDIGLKLADTLPGIKPTLVRQAMGLNDLPDWLDHAD
SIO_010081: DDA3937_RS02385
subclass of: SO_0000673
so part of: DDA3937_RS02385
location: complement(528351..529562)
location: region:528351-529562:-1
so has part: feature:528351-529562:-1:exon

WP_013316185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528351-529562:-1:exon

DDA3937_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
alternative label: visB
gene: ubiH
locus tag: DDA3937_RS02390
old locus tag: Dda3937_02683
gene synonym: visB
so part of: sequence
location: complement(529585..530763)
location: region:529585-530763:-1
so has part: feature:529585-530763:-1:exon
subclass of: SO_0000010

9731891
type: Gene
SIO_000068: ncbigene

position:529585:-1
position: 529585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530763:-1
position: 530763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529585-530763:-1:exon

DDA3937_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
alternative label: visB
gene: ubiH
locus tag: DDA3937_RS02390
old locus tag: Dda3937_02683
gene synonym: visB
EC number: 1.14.13.-
function: 1.5.3.11 metabolism; building block biosynthesis; cofactor, small molecule carrier; menaquinone, ubiquinone
function: 1.3.6 metabolism; energy metabolism, carbon; aerobic respiration
function: 7.2 location of gene products; periplasmic space
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015847919.1
GO function: GO:0008681 - 2-octaprenyl-6-methoxyphenol hydroxylase activity [Evidence IEA]; GO:0071949 - FAD binding [Evidence IEA]; GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-octaprenyl-6-methoxyphenyl hydroxylase
translation: MTVMIVGGGMAGATLALAISRLSGGRIPVDLIEARSPQENQHPGFDARAIALAQGTCMQLDAIGVWQALAPVATPIASVHVSDQGHAGRVRLQASDYRVPALGHVVELHDAGKRLFSLLQNAPGVRLHCPATEVEVNREVDGASLLLDNGALLSGQLLVAADGSRSRLAQLAGIQWQQTPYEQVAIIANVTTAVAHQGRAYERFTEHGPLALLPMSKGRSSLVWCHPLSQQAEVDSWSDAQFLQQLQRAFGWRLGAITQVGERHSYPLALVTAGQHISHRLALVGNAAQTLHPIAGQGFNLGLRDVMTLAETLTAAIGQGEDLGSQAVLQRYQRRRQPDQHTTVALTDGLVRVFSNHLLPMEVGRNLGLMAMNSLPLLRDVLARRTLGWVER
SIO_010081: DDA3937_RS02390
subclass of: SO_0000673
so part of: DDA3937_RS02390
location: complement(529585..530763)
location: region:529585-530763:-1
so has part: feature:529585-530763:-1:exon

WP_013316186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529585-530763:-1:exon

DDA3937_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: pepP
locus tag: DDA3937_RS02395
old locus tag: Dda3937_02682
so part of: sequence
location: complement(530760..532088)
location: region:530760-532088:-1
so has part: feature:530760-532088:-1:exon
subclass of: SO_0000010

9731892
type: Gene
SIO_000068: ncbigene

position:530760:-1
position: 530760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532088:-1
position: 532088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530760-532088:-1:exon

DDA3937_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: pepP
locus tag: DDA3937_RS02395
old locus tag: Dda3937_02682
EC number: 3.4.11.9
function: 1.2.3 metabolism; macromolecule degradation; proteins/peptides/glycopeptides
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883227.1
GO function: GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Xaa-Pro aminopeptidase
translation: MNQQEYLRRRLALLDKMAPGSAAILFAAPEAQRNADSDYPYRQSSDFWYFTGFNEPEAALLLIKSDENHHHSVLFNRVRDVTAEIWFGRRLGQEAAPSKLGVDRALPFSEIGEQLHLLLNGLDVVYHAQGEYAYADKLVFAALETLRTGGTRKGFHAPATLTDWRPWVHDMRLFKSSAEIDILRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFTRHGARYPSYNTIVGSGENACILHYTENECQMRDGDLVLIDAGCEYQGYAGDITRTFPVNGKFTPAQRAIYDIVLESEVRAIEMFAPGRSIREVNEEVVRIMLRGLIKLGILQGDVDTLFAEQAHRQFFMHGLSHWLGMDVHDVGDYGTADRGRTLEPGMVLTVEPGLYIAPDADVPPEYRGIGIRIEDDIVITESGNDVLTGDVVKDPEEIEALMARAAGQAS
SIO_010081: DDA3937_RS02395
subclass of: SO_0000673
so part of: DDA3937_RS02395
location: complement(530760..532088)
location: region:530760-532088:-1
so has part: feature:530760-532088:-1:exon

WP_013316187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530760-532088:-1:exon

DDA3937_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02400
old locus tag: Dda3937_02681
so part of: sequence
location: complement(532127..532711)
location: region:532127-532711:-1
so has part: feature:532127-532711:-1:exon
subclass of: SO_0000010

9731893
type: Gene
SIO_000068: ncbigene

position:532127:-1
position: 532127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532711:-1
position: 532711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532127-532711:-1:exon

DDA3937_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02400
old locus tag: Dda3937_02681
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001399355.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YecA family protein
translation: MSIQNTLPGYDAIDQLLRQHQVALTAAEMHGLISGMLCGGNHDDSWKTLTFELTNDGMAFPQTLAQPLQHLYQATRDALEDDGFLFQLFLPDDTQEHVSVFDRADALAGWVNHFLLGLGVVQPRLGKTQGELKEAIDDLRNIAQLGYDEDEDKDELEQSLEEVIEYVRVAAIMCHNEFTRPVITAPEKKKPTLH
SIO_010081: DDA3937_RS02400
subclass of: SO_0000673
so part of: DDA3937_RS02400
location: complement(532127..532711)
location: region:532127-532711:-1
so has part: feature:532127-532711:-1:exon

WP_013316188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532127-532711:-1:exon

DDA3937_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: zapA
locus tag: DDA3937_RS02405
old locus tag: Dda3937_02680
so part of: sequence
location: 533044..533373
location: region:533044-533373:1
so has part: feature:533044-533373:1:exon
subclass of: SO_0000010

9731894
type: Gene
SIO_000068: ncbigene

position:533044:1
position: 533044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533373:1
position: 533373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533044-533373:1:exon

DDA3937_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
gene: zapA
locus tag: DDA3937_RS02405
old locus tag: Dda3937_02680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005971092.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein ZapA
translation: MSAQPVDIQIFGRSLRVNCPPEQQDALNQAAEDLNQRLQDLKVRTRVTNTEQLVFIAALNVCHELAQERLKTRDYAANMEQRIRMLQQTIEQALLEQGRITERQGAQFE
SIO_010081: DDA3937_RS02405
subclass of: SO_0000673
so part of: DDA3937_RS02405
location: 533044..533373
location: region:533044-533373:1
so has part: feature:533044-533373:1:exon

WP_012883229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533044-533373:1:exon

DDA3937_RS21805
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
gene: ssrS
locus tag: DDA3937_RS21805
old locus tag: Dda3937_04683
so part of: sequence
location: 533456..533638
location: region:533456-533638:1
so has part: feature:533456-533638:1:exon
subclass of: SO_0000011

30316567
type: Gene
SIO_000068: ncbigene

position:533456:1
position: 533456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533638:1
position: 533638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533456-533638:1:exon

DDA3937_RS21805
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 198628
nc RNA class: other
gene: ssrS
locus tag: DDA3937_RS21805
old locus tag: Dda3937_04683
product: 6S RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00013
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DDA3937_RS21805
subclass of: SO_0000673
so part of: DDA3937_RS21805
location: 533456..533638
location: region:533456-533638:1
so has part: feature:533456-533638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533456-533638:1:exon

DDA3937_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 198628
locus tag: DDA3937_RS02410
old locus tag: Dda3937_02679
so part of: sequence
location: 533693..534307
location: region:533693-534307:1
so has part: feature:533693-534307:1:exon
subclass of: SO_0000010

9731896
type: Gene
SIO_000068: ncbigene

position:533693:1
position: 533693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534307:1
position: 534307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533693-534307:1:exon

DDA3937_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 198628
locus tag: DDA3937_RS02410
old locus tag: Dda3937_02679
EC number: 6.3.3.2
function: 0.1 unknown function; conserved hypothetical product
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843712.1
GO function: GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO process: GO:0006730 - one-carbon metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-formyltetrahydrofolate cyclo-ligase
translation: MNPASAASDLFSITALRQQIRQQVRQRRRALSREQQAIFAGQAAERAMAHPRLGDARRVALFLSFDGELDTQPLIEALWQRQKQVYLPVLHPFCNGHLLFLRYAPDSELVWNRLKIQEPRLDVRQVLPVERLDVLLTPLVAFDAAGQRLGMGGGFYDRTLQHWQSRGPYPIGLAHDCQQVDALPVESWDVPLPEIITPSRHWRW
SIO_010081: DDA3937_RS02410
subclass of: SO_0000673
so part of: DDA3937_RS02410
location: 533693..534307
location: region:533693-534307:1
so has part: feature:533693-534307:1:exon