Brevefilum fermentans isolate CAMBI-1 chromosome I, complete sequence.
Bacteria; Chloroflexota; Anaerolineae; Anaerolineales; Anaerolineaceae; Brevefilum.
Submitted (23-MAY-2017) AALBORG UNIVERSITY, Center for microbial communities, Fredrik Bajers Vej 7H, 9220 Aalborg, Denmark
REFSEQ INFORMATION: The reference sequence is identical to\nLT859958.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/25/2022 01:06:20\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,231\nCDSs (total) :: 2,177\nGenes (coding) :: 2,165\nCDSs (with protein) :: 2,165\nGenes (RNA) :: 54\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 4\nPseudo Genes (total) :: 12\nCDSs (without protein) :: 12\nPseudo Genes (ambiguous residues) :: 0 of 12\nPseudo Genes (frameshifted) :: 1 of 12\nPseudo Genes (incomplete) :: 9 of 12\nPseudo Genes (internal stop) :: 2 of 12\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_013560310.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: protein motif:HMM:TIGR03022.1
GO:0016740 - transferase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
undecaprenyl-phosphate galactose phosphotransferase WbaP
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_013560866.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03843.1
COORDINATES: protein motif:HMM:NF022734.2
COORDINATES: protein motif:HMM:NF004226.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560309.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: protein motif:HMM:NF024748.2
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024248.2
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF024919.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561183.1
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558781.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558782.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561468.1
GO:0033862 - UMP kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561469.1
COORDINATES: similar to AA sequence:RefSeq:WP_006236109.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024675.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559132.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560908.1
COORDINATES: protein motif:HMM:NF016777.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012706.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559291.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559289.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00613.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00211.2
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:TIGR01084.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF013315.2
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:TIGR00765.1
YihY/virulence factor BrkB family protein
COORDINATES: protein motif:HMM:NF012678.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: protein motif:HMM:NF024273.2
COORDINATES: protein motif:HMM:NF038032.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024742.2
COORDINATES: protein motif:HMM:NF009709.0
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: protein motif:HMM:NF014683.2
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015129 - lactate transmembrane transporter activity [Evidence IEA]
GO:0015727 - lactate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF019401.2
COORDINATES: protein motif:HMM:TIGR01407.1
GO:0004527 - exonuclease activity [Evidence IEA]
helicase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024774.2
adenine deaminase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014647.2
BMP family ABC transporter substrate-binding protein
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: protein motif:HMM:NF012870.2
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: protein motif:HMM:NF027582.2
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:NF013356.2
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF014571.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561040.1
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: protein motif:HMM:NF012428.2
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF005499.0
GO:0016829 - lyase activity [Evidence IEA]
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: protein motif:HMM:NF013696.2
COORDINATES: protein motif:HMM:NF024989.2
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF015682.2
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase-like domain-containing protein
COORDINATES: protein motif:HMM:NF039329.1
COORDINATES: protein motif:HMM:NF013697.2
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559056.1
COORDINATES: protein motif:HMM:NF016300.2
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: protein motif:HMM:TIGR00350.1
COORDINATES: protein motif:HMM:NF016202.2
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: protein motif:HMM:NF039825.1
COORDINATES: protein motif:HMM:NF027651.2
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
cytochrome c-type biogenesis CcmF C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015085.2
COORDINATES: protein motif:HMM:NF013843.2
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: protein motif:HMM:NF013702.2
lysophospholipid acyltransferase family protein
COORDINATES: protein motif:HMM:NF016908.2
COORDINATES: protein motif:HMM:NF003246.0
GO:0003963 - RNA-3'-phosphate cyclase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF013618.2
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559895.1
COORDINATES: protein motif:HMM:NF015000.2
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: protein motif:HMM:NF013126.2
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559752.1
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:NF013286.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558969.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558968.1
COORDINATES: protein motif:HMM:TIGR00678.1
COORDINATES: protein motif:HMM:NF013630.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560852.1
COORDINATES: protein motif:HMM:NF001911.0
COORDINATES: similar to AA sequence:RefSeq:WP_013561435.1
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF012697.2
COORDINATES: protein motif:HMM:NF026220.2
COORDINATES: protein motif:HMM:NF025711.2
COORDINATES: protein motif:HMM:NF012698.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025054.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558883.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: protein motif:HMM:TIGR00416.1
COORDINATES: protein motif:HMM:NF039426.1
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558882.1
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013558881.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558880.1
3-methyl-2-oxobutanoate dehydrogenase subunit VorB
COORDINATES: similar to AA sequence:RefSeq:WP_013558879.1
COORDINATES: similar to AA sequence:RefSeq:WP_005133237.1
COORDINATES: protein motif:HMM:NF003555.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015951.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560368.1
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560370.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558669.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_015293283.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013755.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558934.1
COORDINATES: protein motif:HMM:NF039198.1
COORDINATES: protein motif:HMM:NF014044.2
type IV secretion system DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR03562.1
COORDINATES: protein motif:HMM:NF016952.2
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558479.1
COORDINATES: protein motif:HMM:NF024883.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561253.1
GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IEA]
GO:0016054 - organic acid catabolic process [Evidence IEA]
hydroxymethylglutaryl-CoA reductase, degradative
COORDINATES: similar to AA sequence:RefSeq:WP_013561252.1
COORDINATES: protein motif:HMM:NF012336.2
Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013561327.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015291.2
GH3 auxin-responsive promoter family protein
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561526.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561527.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561528.1
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: protein motif:HMM:NF014426.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_013558500.1
COORDINATES: protein motif:HMM:NF024760.2
GO:0070007 - glutamic-type endopeptidase activity [Evidence IEA]
PrsW family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF024853.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558601.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558600.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
R3H domain-containing nucleic acid-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013558597.1
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: protein motif:HMM:NF001664.0
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: protein motif:HMM:NF013921.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF012880.2
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: protein motif:HMM:NF006667.0
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: protein motif:HMM:NF012424.2
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013558437.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014516.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013559176.1
COORDINATES: protein motif:HMM:NF020650.2
COORDINATES: protein motif:HMM:NF018485.2
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:NF020757.2
GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
BglII/BstYI family type II restriction endonuclease
COORDINATES: protein motif:HMM:NF012695.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558744.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: protein motif:HMM:NF023418.2
transglutaminaseTgpA domain-containing protein
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF009881.0
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558633.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558634.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558636.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01525.1
COORDINATES: protein motif:HMM:NF033788.1
COORDINATES: protein motif:HMM:NF015413.2
COORDINATES: protein motif:HMM:NF013715.2
COORDINATES: protein motif:HMM:NF014896.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: protein motif:HMM:NF027788.2
COORDINATES: protein motif:HMM:TIGR00476.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558497.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560618.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016667 - oxidoreductase activity, acting on a sulfur group of donors [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]
protein-methionine-sulfoxide reductase catalytic subunit MsrP
COORDINATES: protein motif:HMM:NF017181.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558984.1
COORDINATES: protein motif:HMM:NF014664.2
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560013.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:TIGR03319.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014668.2
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558931.1
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: protein motif:HMM:NF014615.2
homocysteine S-methyltransferase family protein
COORDINATES: protein motif:HMM:TIGR00172.1
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:NF014625.2
COORDINATES: protein motif:HMM:TIGR03026.1
COORDINATES: protein motif:HMM:NF015692.2
ADP-ribosylglycohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560386.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560923.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560922.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012784.2
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 RNA-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR02937.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_013561359.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561358.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013700.2
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: protein motif:HMM:NF019342.2
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000181401.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560653.1
COORDINATES: protein motif:HMM:NF014445.2
GO:0016755 - aminoacyltransferase activity [Evidence IEA]
GO:0044038 - cell wall macromolecule biosynthetic process [Evidence IEA]
peptidoglycan bridge formation glycyltransferase FemA/FemB family protein
COORDINATES: protein motif:HMM:NF014740.2
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: protein motif:HMM:TIGR03025.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560658.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560661.1
COORDINATES: protein motif:HMM:NF014670.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559490.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014590.2
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561203.1
dihydroorotate dehydrogenase-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_013561204.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
LysM peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF037429.2
COORDINATES: protein motif:HMM:NF013412.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:TIGR02494.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0043687 - post-translational protein modification [Evidence IEA]
glycyl-radical enzyme activating protein
COORDINATES: protein motif:HMM:NF014900.2
COORDINATES: protein motif:HMM:TIGR00654.1
PhzF family phenazine biosynthesis isomerase
COORDINATES: protein motif:HMM:NF015679.2
COORDINATES: protein motif:HMM:NF019507.2
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559127.1
COORDINATES: protein motif:HMM:TIGR00475.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: protein motif:HMM:TIGR02033.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010221054.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558895.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558896.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558897.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558558.1
GO:0008804 - carbamate kinase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558557.1
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558556.1
YgeY family selenium metabolism-linked hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_013558553.1
COORDINATES: protein motif:HMM:NF006625.0
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016408.2
COORDINATES: protein motif:HMM:TIGR03570.1
NeuD/PglB/VioB family sugar acetyltransferase
COORDINATES: protein motif:HMM:NF014798.2
transketolase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00567.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559279.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: protein motif:HMM:NF019552.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558609.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560198.1
COORDINATES: protein motif:HMM:NF014688.2
COORDINATES: protein motif:HMM:TIGR00087.1
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00792.1
COORDINATES: protein motif:HMM:NF016147.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561207.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561492.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561270.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00634.1
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560851.1
COORDINATES: protein motif:HMM:TIGR01069.1
GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016228.2
COORDINATES: protein motif:HMM:TIGR00230.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018816.2
COORDINATES: protein motif:HMM:NF010167.0
GO:0015833 - peptide transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_013560669.1
COORDINATES: protein motif:HMM:NF013382.2
GO:0008168 - methyltransferase activity [Evidence IEA]
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF013694.2
magnesium transporter CorA family protein
COORDINATES: protein motif:HMM:NF014090.2
GO:0005384 - manganese ion transmembrane transporter activity [Evidence IEA]
GO:0030026 - cellular manganese ion homeostasis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00383.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013970.2
type II toxin-antitoxin system VapC family toxin
COORDINATES: protein motif:HMM:NF015947.2
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00348.1
type I restriction endonuclease subunit R
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF014442.2
class I SAM-dependent DNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013558542.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559582.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015912.2
RNA polymerase sigma factor region1.1 domain-containing protein
COORDINATES: protein motif:HMM:NF003658.0
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF018884.2
protein phosphatase 2C domain-containing protein
COORDINATES: protein motif:HMM:NF028007.2
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF013068.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013559708.1
branched-chain amino acid ABC transporter permease
COORDINATES: protein motif:HMM:NF024850.2
amino acid ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR00004.1
GO:0019239 - deaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013539.2
MurR/RpiR family transcriptional regulator
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF012885.2
COORDINATES: protein motif:HMM:NF024938.2
GO:0004803 - transposase activity [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017655.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560932.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560933.1
GO:0000310 - xanthine phosphoribosyltransferase activity [Evidence IEA]
GO:0046110 - xanthine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF039362.1
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_013560359.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02290.1
COORDINATES: protein motif:HMM:TIGR01718.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013232.2
COORDINATES: protein motif:HMM:NF024231.2
COORDINATES: protein motif:HMM:NF013473.2
COORDINATES: protein motif:HMM:TIGR02127.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00670.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561536.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559173.1
choice-of-anchor Q domain-containing protein
COORDINATES: protein motif:HMM:NF013109.2
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: protein motif:HMM:NF025475.2
COORDINATES: protein motif:HMM:TIGR01240.1
GO:0004163 - diphosphomevalonate decarboxylase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560392.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560394.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559271.1
COORDINATES: protein motif:HMM:NF022338.2
COORDINATES: protein motif:HMM:NF014049.2
COORDINATES: protein motif:HMM:NF013381.2
uroporphyrinogen decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002448057.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024257.2
substrate-binding domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF01055
molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013776.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560236.1
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: protein motif:HMM:NF015438.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02666.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018465116.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: protein motif:HMM:NF011068.0
GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:NF021384.2
COORDINATES: protein motif:HMM:NF024937.2
COORDINATES: protein motif:HMM:NF025198.2
COORDINATES: protein motif:HMM:NF016085.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559098.1
thiamine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013559241.1
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:TIGR01182.1
GO:0008675 - 2-dehydro-3-deoxy-phosphogluconate aldolase activity [Evidence IEA]; GO:0008700 - 4-hydroxy-2-oxoglutarate aldolase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]; GO:0009084 - glutamine family amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
COORDINATES: similar to AA sequence:RefSeq:WP_013559423.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_018003268.1
COORDINATES: similar to AA sequence:RefSeq:WP_010720461.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559426.1
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012084982.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559429.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559430.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF004363.0
COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559433.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559434.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559435.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018133712.1
COORDINATES: similar to AA sequence:RefSeq:WP_018590375.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559438.1
COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
COORDINATES: similar to AA sequence:RefSeq:WP_002461784.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559441.1
COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1
COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1
COORDINATES: similar to AA sequence:RefSeq:WP_017722933.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559445.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559446.1
COORDINATES: similar to AA sequence:RefSeq:WP_001085235.1
COORDINATES: similar to AA sequence:RefSeq:WP_016911111.1
COORDINATES: protein motif:HMM:TIGR00967.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559450.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559451.1
COORDINATES: similar to AA sequence:RefSeq:WP_005487032.1
COORDINATES: similar to AA sequence:RefSeq:WP_013016495.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559455.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559456.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013559457.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00071.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559459.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559460.1
COORDINATES: protein motif:HMM:NF007113.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: protein motif:HMM:NF015563.2
COORDINATES: protein motif:HMM:NF024241.2
COORDINATES: protein motif:HMM:NF012422.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013561063.1
COORDINATES: protein motif:HMM:NF017517.2
dual specificity protein phosphatase family protein
COORDINATES: protein motif:HMM:NF025446.2
COORDINATES: protein motif:HMM:NF013357.2
GO:0003796 - lysozyme activity [Evidence IEA]
GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012457.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560704.1
COORDINATES: protein motif:HMM:NF012267.2
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: protein motif:HMM:NF012425.2
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: protein motif:HMM:NF015669.2
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: protein motif:HMM:TIGR01826.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559744.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013559743.1
COORDINATES: protein motif:HMM:NF039835.1
COORDINATES: protein motif:HMM:NF024627.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:NF016906.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560327.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560383.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
TFIIB-type zinc ribbon-containing protein
COORDINATES: protein motif:HMM:NF027484.2
COORDINATES: protein motif:HMM:NF017774.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559817.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559818.1
COORDINATES: protein motif:HMM:NF019156.2
COORDINATES: protein motif:HMM:NF001490.0
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:TIGR00030.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561200.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: similar to AA sequence:RefSeq:WP_002341308.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560629.1
COORDINATES: protein motif:HMM:NF015882.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558810.1
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: protein motif:HMM:NF019142.2
ubiquitin-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR00580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560439.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560035.1
COORDINATES: protein motif:HMM:NF005302.0
COORDINATES: protein motif:HMM:NF027787.2
energy-coupling factor transporter ATPase
COORDINATES: protein motif:HMM:NF004326.0
s-methyl-5-thioribose-1-phosphate isomerase
MTAP family purine nucleoside phosphorylase
COORDINATES: protein motif:HMM:NF017941.2
COORDINATES: protein motif:HMM:TIGR02152.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01643.1
COORDINATES: protein motif:HMM:TIGR01909.1
COORDINATES: protein motif:HMM:NF037016.2
COORDINATES: protein motif:HMM:NF025343.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560167.1
COORDINATES: protein motif:HMM:NF002211.1
GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015956.2
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF021388.2
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: protein motif:HMM:TIGR02024.1
GO:0030412 - formimidoyltetrahydrofolate cyclodeaminase activity [Evidence IEA]; GO:0030409 - glutamate formimidoyltransferase activity [Evidence IEA]
GO:0019556 - histidine catabolic process to glutamate and formamide [Evidence IEA]
COORDINATES: protein motif:HMM:NF003459.0
COORDINATES: protein motif:HMM:NF021127.2
COORDINATES: protein motif:HMM:NF024245.2
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559480.1
COORDINATES: protein motif:HMM:NF017920.2
COORDINATES: protein motif:HMM:NF024595.2
COORDINATES: protein motif:HMM:NF014869.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00168.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558492.1
COORDINATES: similar to AA sequence:RefSeq:WP_009635878.1
COORDINATES: protein motif:HMM:TIGR03663.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559148.1
GO:0046336 - ethanolamine catabolic process [Evidence IEA]
ethanolamine utilization microcompartment protein EutL
COORDINATES: similar to AA sequence:RefSeq:WP_013559147.1
GO:0008851 - ethanolamine ammonia-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559146.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559145.1
ethanolamine ammonia-lyase reactivating factor EutA
COORDINATES: similar to AA sequence:RefSeq:WP_013559150.1
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: protein motif:HMM:NF033543.1
COORDINATES: protein motif:HMM:NF014048.2
GO:0004519 - endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560593.1
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: protein motif:HMM:NF006695.0
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:TIGR01953.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558658.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558657.1
COORDINATES: protein motif:HMM:TIGR00082.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004162.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: protein motif:HMM:NF014560.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013558517.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF001960.0
COORDINATES: similar to AA sequence:RefSeq:WP_013559484.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015597.2
COORDINATES: protein motif:HMM:NF015758.2
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000014591.1
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: protein motif:HMM:TIGR04350.1
COORDINATES: protein motif:HMM:NF013226.2
COORDINATES: protein motif:HMM:NF014517.2
COORDINATES: protein motif:HMM:NF013046.2
COORDINATES: protein motif:HMM:NF017536.2
sugar ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF024095.2
COORDINATES: protein motif:HMM:NF019556.2
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: protein motif:HMM:NF040740.1
COORDINATES: protein motif:HMM:NF040739.1
2-amino-4-oxopentanoate thiolase subunit OrtA
COORDINATES: protein motif:HMM:NF040741.1
2-amino-4-oxopentanoate thiolase subunit OrtB
COORDINATES: protein motif:HMM:NF027866.2
D-ornithine 4,5-aminomutase subunit OraS
COORDINATES: protein motif:HMM:NF040743.1
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
D-ornithine 4,5-aminomutase subunit OraE
COORDINATES: protein motif:HMM:NF025309.2
COORDINATES: protein motif:HMM:NF013345.2
alanine/ornithine racemase family PLP-dependent enzyme
COORDINATES: protein motif:HMM:TIGR00492.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003716979.1
amino acid ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF012707.2
COORDINATES: protein motif:HMM:NF006132.0
COORDINATES: protein motif:HMM:NF021387.2
GO:0050043 - lactate racemase activity [Evidence IEA]
lactate racemase domain-containing protein
COORDINATES: protein motif:HMM:TIGR04380.1
GO:0050112 - inositol 2-dehydrogenase activity [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013200.2
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: protein motif:HMM:NF014910.2
COORDINATES: protein motif:HMM:NF041099.2
GO:0016853 - isomerase activity [Evidence IEA]
GO:0006020 - inositol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF041097.1
COORDINATES: protein motif:HMM:NF041098.2
COORDINATES: protein motif:HMM:NF012335.2
COORDINATES: protein motif:HMM:NF012742.2
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: protein motif:HMM:NF013811.2
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF003160.0
COORDINATES: protein motif:HMM:NF024921.2
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: protein motif:HMM:NF014899.2
class III extradiol ring-cleavage dioxygenase
COORDINATES: similar to AA sequence:RefSeq:WP_013560171.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: protein motif:HMM:NF039402.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560803.1
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: protein motif:HMM:NF023580.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561429.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: protein motif:HMM:TIGR00084.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_013559787.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559786.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_013559785.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:TIGR02605.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560026.1
GO:0015031 - protein transport [Evidence IEA]
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:TIGR00945.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:NF002677.0
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558605.1
COORDINATES: protein motif:HMM:NF021592.2
YhfC family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: protein motif:HMM:TIGR00762.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559783.1
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:NF016351.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560645.1
COORDINATES: protein motif:HMM:TIGR03960.1
TIGR03960 family B12-binding radical SAM protein
COORDINATES: protein motif:HMM:TIGR03936.1
TIGR03936 family radical SAM-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559957.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF014653.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560060.1
COORDINATES: similar to AA sequence:RefSeq:WP_009305590.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: protein motif:HMM:NF040134.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558856.1
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00090.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: protein motif:HMM:TIGR00089.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: similar to AA sequence:RefSeq:WP_000240855.1
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013932.2
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:TIGR03592.1
YidC/Oxa1 family membrane protein insertase
COORDINATES: protein motif:HMM:NF013583.2
RNA-binding cell elongation regulator Jag/EloR
COORDINATES: similar to AA sequence:RefSeq:WP_013560680.1
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558575.1
GO:0050661 - NADP binding [Evidence IEA]; GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
NADP-dependent phosphogluconate dehydrogenase
COORDINATES: protein motif:HMM:NF020039.2
SMP-30/gluconolactonase/LRE family protein
COORDINATES: protein motif:HMM:NF013234.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561080.1
GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO:0009168 - purine ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: protein motif:HMM:NF002083.0
GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012618.2
COORDINATES: protein motif:HMM:NF015722.2
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: protein motif:HMM:NF024637.2
COORDINATES: protein motif:HMM:NF024183.2
COORDINATES: protein motif:HMM:NF020571.2
COORDINATES: protein motif:HMM:NF015728.2
RAMP superfamily CRISPR-associated protein
COORDINATES: protein motif:HMM:TIGR03984.2
COORDINATES: protein motif:HMM:TIGR03986.1
TIGR03986 family CRISPR-associated RAMP protein
COORDINATES: protein motif:HMM:NF040560.1
COORDINATES: protein motif:HMM:NF021551.2
CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
COORDINATES: protein motif:HMM:NF040303.1
COORDINATES: protein motif:HMM:NF024099.2
COORDINATES: similar to AA sequence:RefSeq:WP_002317293.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: protein motif:HMM:TIGR03696.1
RHS repeat-associated core domain-containing protein
COORDINATES: protein motif:HMM:NF026766.2
COORDINATES: protein motif:HMM:NF015497.2
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: similar to AA sequence:RefSeq:WP_002604482.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF040302.1
COORDINATES: protein motif:HMM:NF024083.2
COORDINATES: similar to AA sequence:RefSeq:WP_016147847.1
COORDINATES: similar to AA sequence:RefSeq:WP_002595174.1
COORDINATES: similar to AA sequence:RefSeq:WP_003500106.1
COORDINATES: similar to AA sequence:RefSeq:WP_003502116.1
COORDINATES: protein motif:HMM:NF017102.2
COORDINATES: protein motif:HMM:NF025556.2
COORDINATES: protein motif:HMM:NF025641.2
COORDINATES: protein motif:HMM:NF015935.2
COORDINATES: protein motif:HMM:NF024578.2
COORDINATES: protein motif:HMM:NF037287.2
COORDINATES: protein motif:HMM:NF037736.2
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF015397.2
relaxase/mobilization nuclease domain-containing protein
COORDINATES: protein motif:HMM:NF017524.2
plasmid mobilization relaxosome protein MobC
COORDINATES: protein motif:HMM:NF025643.2
COORDINATES: similar to AA sequence:RefSeq:WP_017899411.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012464.2
COORDINATES: protein motif:HMM:NF012307.2
reverse transcriptase/maturase family protein
COORDINATES: protein motif:HMM:TIGR00287.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01573.1
COORDINATES: protein motif:HMM:NF016362.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024991.2
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012787.2
COORDINATES: protein motif:HMM:TIGR01472.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561115.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00096.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013558720.1
GO:1990397 - queuosine salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00046.1
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: protein motif:HMM:TIGR00147.1
diacylglycerol kinase family lipid kinase
COORDINATES: protein motif:HMM:NF013362.2
COORDINATES: protein motif:HMM:NF018758.2
COORDINATES: protein motif:HMM:TIGR00449.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:NF024855.2
COORDINATES: protein motif:HMM:TIGR00158.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558700.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558701.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560915.1
COORDINATES: protein motif:HMM:NF013624.2
COORDINATES: protein motif:HMM:NF005540.0
COORDINATES: similar to AA sequence:RefSeq:WP_013559850.1
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559851.1
GO:0043773 - coenzyme F420-0 gamma-glutamyl ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024952.2
COORDINATES: protein motif:HMM:TIGR01819.1
GO:0043743 - LPPG:FO 2-phospho-L-lactate transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03552.1
GO:0043814 - phospholactate guanylyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559855.1
LLM class flavin-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: protein motif:HMM:NF013134.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559857.1
COORDINATES: protein motif:HMM:NF024869.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559861.1
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: protein motif:HMM:TIGR03309.1
selenium-dependent molybdenum cofactor biosynthesis protein YqeB
COORDINATES: protein motif:HMM:TIGR03172.2
selenium cofactor biosynthesis protein YqeC
COORDINATES: similar to AA sequence:RefSeq:WP_013560223.1
COORDINATES: protein motif:HMM:NF041131.1
regulatory iron-sulfur-containing complex subunit RicT
COORDINATES: protein motif:HMM:TIGR01891.1
COORDINATES: protein motif:HMM:NF024813.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560454.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013560453.1
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: protein motif:HMM:NF019291.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
TaqI-like C-terminal specificity domain-containing protein
COORDINATES: protein motif:HMM:NF025696.2
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560452.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560447.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: protein motif:HMM:NF018913.2
COORDINATES: protein motif:HMM:NF012383.2
COORDINATES: protein motif:HMM:TIGR00741.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: protein motif:HMM:NF006826.0
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00526.1
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024831.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF013915.2
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: protein motif:HMM:TIGR00232.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560211.1
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: protein motif:HMM:NF007080.0
bifunctional transaldolase/phosoglucose isomerase
COORDINATES: protein motif:HMM:NF015607.2
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024247.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560499.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02095.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560501.1
COORDINATES: protein motif:HMM:TIGR00200.1
CinA family nicotinamide mononucleotide deamidase-related protein
COORDINATES: protein motif:HMM:NF009154.0
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00174.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560485.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560482.1
COORDINATES: protein motif:HMM:NF025380.2
COORDINATES: protein motif:HMM:NF014417.2
transcription termination/antitermination NusG family protein
COORDINATES: protein motif:HMM:NF013607.2
COORDINATES: protein motif:HMM:TIGR01007.1
GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: protein motif:HMM:NF026257.2
COORDINATES: protein motif:HMM:NF013636.2
COORDINATES: protein motif:HMM:NF033679.1
COORDINATES: protein motif:HMM:TIGR02228.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013524.2
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: protein motif:HMM:NF017239.2
COORDINATES: protein motif:HMM:NF038131.1
choice-of-anchor K domain-containing protein
COORDINATES: protein motif:HMM:TIGR02436.1
COORDINATES: protein motif:HMM:NF016763.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560110.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560111.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560112.1
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: protein motif:HMM:NF025217.2
phenylacetate--CoA ligase family protein
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF021616.2
COORDINATES: protein motif:HMM:NF012936.2
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560416.1
COORDINATES: protein motif:HMM:NF021492.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561002.1
COORDINATES: protein motif:HMM:TIGR01722.1
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF014795.2
COORDINATES: protein motif:HMM:NF012670.2
COORDINATES: protein motif:HMM:NF006753.0
COORDINATES: protein motif:HMM:NF019559.2
COORDINATES: protein motif:HMM:NF005574.0
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012402.2
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559300.1
COORDINATES: protein motif:HMM:NF015411.2
GO:0050661 - NADP binding [Evidence IEA]
NAD(P)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014425.2
GO:0000030 - mannosyltransferase activity [Evidence IEA]
GO:0006493 - protein O-linked glycosylation [Evidence IEA]
phospholipid carrier-dependent glycosyltransferase
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024214.2
phosphocholine cytidylyltransferase family protein
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF025665.2
glycoside hydrolase family 99-like domain-containing protein
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: protein motif:HMM:NF025755.2
sugar-transfer associated ATP-grasp domain-containing protein
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561303.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_013561304.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561305.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:TIGR04337.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
AmmeMemoRadiSam system radical SAM enzyme
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558612.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558611.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558610.1
COORDINATES: protein motif:HMM:TIGR02456.1
GO:0047471 - maltose alpha-D-glucosyltransferase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00594.1
GO:0046914 - transition metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF017069.2
COORDINATES: protein motif:HMM:NF014132.2
SCP2 sterol-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013999.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560202.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560201.1
GO:0005198 - structural molecule activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01981.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560189.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: protein motif:HMM:TIGR00100.1
GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: protein motif:HMM:NF012257.2
cyclic nucleotide-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00129.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: similar to AA sequence:RefSeq:WP_013561362.1
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560186.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_013560185.1
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: similar to AA sequence:RefSeq:WP_013560184.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560183.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: protein motif:HMM:NF013426.2
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: protein motif:HMM:NF018753.2
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: protein motif:HMM:TIGR00442.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560678.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00005.1
COORDINATES: protein motif:HMM:NF041359.1
COORDINATES: protein motif:HMM:NF028488.2
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF024581.2
COORDINATES: protein motif:HMM:NF014692.2
COORDINATES: protein motif:HMM:NF024924.2
COORDINATES: protein motif:HMM:NF024644.2
COORDINATES: protein motif:HMM:NF013481.2
aldehyde ferredoxin oxidoreductase family protein
prenyltransferase/squalene oxidase repeat-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF014296.2
methylenetetrahydrofolate reductase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024821.2
COORDINATES: protein motif:HMM:NF025885.2
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: protein motif:HMM:NF016827.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560097.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
COORDINATES: similar to AA sequence:RefSeq:WP_013560100.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560101.1
COORDINATES: protein motif:HMM:TIGR01031.1
COORDINATES: protein motif:HMM:NF020967.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560272.1
COORDINATES: protein motif:HMM:NF021134.2
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559581.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559584.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: protein motif:HMM:NF016060.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559589.1
COORDINATES: protein motif:HMM:TIGR00281.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00093.1
COORDINATES: protein motif:HMM:TIGR00182.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
LysM peptidoglycan-binding domain-containing M23 family metallopeptidase
COORDINATES: protein motif:HMM:TIGR00633.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560085.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: similar to AA sequence:RefSeq:WP_013560084.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: similar to AA sequence:RefSeq:WP_013560083.1
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_016293345.1
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560218.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013560217.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: protein motif:HMM:NF004491.0
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560214.1
GO:0004587 - ornithine-oxo-acid transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560213.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00043.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: protein motif:HMM:TIGR00426.1
COORDINATES: protein motif:HMM:NF018798.2
COORDINATES: protein motif:HMM:NF006579.0
COORDINATES: similar to AA sequence:RefSeq:WP_013560129.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01460.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560063.1
COORDINATES: protein motif:HMM:NF025042.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561088.1
GO:0008199 - ferric iron binding [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA]
GO:0006880 - intracellular sequestering of iron ion [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00131.1
GO:0004335 - galactokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF037660.2
COORDINATES: protein motif:HMM:NF012664.2
COORDINATES: protein motif:HMM:TIGR01448.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015649.2
BTAD domain-containing putative transcriptional regulator
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: protein motif:HMM:NF020130.2
COORDINATES: protein motif:HMM:NF014594.2
acetyl-CoA hydrolase/transferase C-terminal domain-containing protein
beta-ketoacyl synthase N-terminal-like domain-containing protein
COORDINATES: protein motif:HMM:NF013920.2
Zn-ribbon domain-containing OB-fold protein
COORDINATES: protein motif:HMM:NF027579.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558901.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559891.1
COORDINATES: protein motif:HMM:NF020543.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559504.1
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF036989.2
COORDINATES: protein motif:HMM:TIGR00181.1
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559188.1
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: protein motif:HMM:NF023401.2
COORDINATES: protein motif:HMM:NF013986.2
BadF/BadG/BcrA/BcrD ATPase family protein
COORDINATES: protein motif:HMM:NF013206.2
gamma-glutamyltransferase family protein
COORDINATES: protein motif:HMM:NF036294.2
COORDINATES: protein motif:HMM:NF015513.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: similar to AA sequence:RefSeq:WP_228130011.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
Most members of this family contain a selenocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013408.2
COORDINATES: protein motif:HMM:NF012669.2
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: protein motif:HMM:TIGR00126.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561272.1
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF024799.2
COORDINATES: protein motif:HMM:NF024969.2
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:TIGR00065.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017206.2
COORDINATES: protein motif:HMM:NF015052.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560137.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560135.1
COORDINATES: protein motif:HMM:NF016115.2
COORDINATES: protein motif:HMM:NF012308.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559035.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
large conductance mechanosensitive channel protein MscL
COORDINATES: similar to AA sequence:RefSeq:WP_013558616.1
COORDINATES: similar to AA sequence:RefSeq:WP_157891771.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013560069.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_013560068.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_013560066.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560071.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560072.1
COORDINATES: protein motif:HMM:TIGR01509.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560073.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF015721.2
Asp23/Gls24 family envelope stress response protein
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR00224.1
GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559529.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013559920.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013391.2
COORDINATES: protein motif:HMM:NF015953.2
COORDINATES: protein motif:HMM:TIGR00166.1
COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1
COORDINATES: protein motif:HMM:NF025010.2
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560640.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: protein motif:HMM:NF024143.2
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013239.2
COORDINATES: protein motif:HMM:NF008232.0
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: protein motif:HMM:NF039905.1
GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014850.2
glycoside hydrolase family 2 TIM barrel-domain containing protein
COORDINATES: protein motif:HMM:NF014926.2
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: protein motif:HMM:NF027541.2
GxGYxYP family putative glycoside hydrolase
GO:0015486 - glycoside-pentoside-hexuronide:cation symporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0006812 - monoatomic cation transport [Evidence IEA]
glycoside-pentoside-hexuronide (GPH):cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_013560289.1
COORDINATES: protein motif:HMM:NF017959.2
COORDINATES: protein motif:HMM:NF037959.1
COORDINATES: protein motif:HMM:TIGR01906.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560468.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559779.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008741 - ribulokinase activity [Evidence IEA]
GO:0019569 - L-arabinose catabolic process to xylulose 5-phosphate [Evidence IEA]
COORDINATES: protein motif:HMM:NF012456.2
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00962.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
COORDINATES: protein motif:HMM:NF012645.2
COORDINATES: protein motif:HMM:NF012365.2
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01131.1
COORDINATES: protein motif:HMM:NF024368.2
COORDINATES: protein motif:HMM:NF021073.2
COORDINATES: protein motif:HMM:NF014838.2
COORDINATES: similar to AA sequence:RefSeq:WP_020045332.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: protein motif:HMM:NF025038.2
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: protein motif:HMM:NF013279.2
FtsW/RodA/SpoVE family cell cycle protein
COORDINATES: protein motif:HMM:TIGR01222.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03423.1
COORDINATES: protein motif:HMM:TIGR00219.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559394.1
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560239.1
COORDINATES: protein motif:HMM:NF014630.2
C4-type zinc ribbon domain-containing protein
COORDINATES: protein motif:HMM:TIGR00044.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: protein motif:HMM:NF006871.0
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560255.1
COORDINATES: protein motif:HMM:NF003843.0
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF014305.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560262.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002320.0
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0009156 - ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559811.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559808.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559807.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF024157.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559549.1
COORDINATES: protein motif:HMM:TIGR00636.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559553.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559557.1
COORDINATES: protein motif:HMM:NF014058.2
COORDINATES: protein motif:HMM:NF023818.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559561.1
GO:0017061 - S-methyl-5-thioadenosine phosphorylase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00234.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559419.1
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:TIGR00544.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: protein motif:HMM:NF013250.2
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:NF013727.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559409.1
COORDINATES: protein motif:HMM:NF000908.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013222.2
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013558496.1
phosphoribosyltransferase family protein
COORDINATES: protein motif:HMM:NF016840.2
COORDINATES: protein motif:HMM:NF013125.2
COORDINATES: protein motif:HMM:NF004046.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00103.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_013558568.1
COORDINATES: protein motif:HMM:TIGR00344.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560469.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561135.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00460.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF021221.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560473.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012677.2
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: similar to AA sequence:RefSeq:WP_013559896.1
PLP-dependent aminotransferase family protein
glucodextranase DOMON-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR00731.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF019542.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559886.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559884.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00010.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559840.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559921.1
COORDINATES: protein motif:HMM:NF012298.2
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559932.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559933.1
COORDINATES: protein motif:HMM:TIGR03599.1
COORDINATES: protein motif:HMM:NF008168.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559938.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00763.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01499.1
folylpolyglutamate synthase/dihydrofolate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559793.1
COORDINATES: protein motif:HMM:NF018178.2
COORDINATES: protein motif:HMM:NF014474.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560208.1
pyridoxal phosphate-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF003444.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0000062 - fatty-acyl-CoA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0019217 - regulation of fatty acid metabolic process [Evidence IEA]
fatty acid metabolism transcriptional regulator FadR
glycerol-3-phosphate dehydrogenase/oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_013559352.1
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: protein motif:HMM:NF033504.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560662.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560663.1
COORDINATES: protein motif:HMM:NF012622.2
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
dockerin type I domain-containing protein
COORDINATES: protein motif:HMM:NF013156.2
GO:0030246 - carbohydrate binding [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013561097.1
COORDINATES: protein motif:HMM:NF013378.2
COORDINATES: protein motif:HMM:NF014626.2
COORDINATES: protein motif:HMM:NF039800.1
COORDINATES: protein motif:HMM:NF024724.2
COORDINATES: protein motif:HMM:NF012364.2
DNA polymerase domain-containing protein
COORDINATES: protein motif:HMM:NF013122.2
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: protein motif:HMM:TIGR01316.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_310560.1
COORDINATES: protein motif:HMM:NF037527.2
COORDINATES: protein motif:HMM:NF037085.2
COORDINATES: protein motif:HMM:TIGR00585.2
COORDINATES: protein motif:HMM:NF019246.2
YkoF family thiamine/hydroxymethylpyrimidine-binding protein
COORDINATES: protein motif:HMM:NF014788.2
COORDINATES: protein motif:HMM:NF014177.2
COORDINATES: protein motif:HMM:NF020933.2
DNA double-strand break repair nuclease NurA
COORDINATES: similar to AA sequence:RefSeq:WP_013558953.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0009381 - excinuclease ABC activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560973.1
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
COORDINATES: protein motif:HMM:NF039818.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558838.1
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016291595.1
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558842.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:NF025925.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558785.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560977.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015957.2
COORDINATES: protein motif:HMM:NF015084.2
biotin/lipoate A/B protein ligase family protein
COORDINATES: protein motif:HMM:NF024376.2
PhnD/SsuA/transferrin family substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559514.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559513.1
COORDINATES: protein motif:HMM:NF014220.2
COORDINATES: protein motif:HMM:NF004044.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559510.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: protein motif:HMM:NF015536.2
GO:0070004 - cysteine-type exopeptidase activity [Evidence IEA]; GO:0016805 - dipeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559505.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03662.1
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559997.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559998.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559999.1
decaprenyl-phosphate phosphoribosyltransferase
COORDINATES: protein motif:HMM:TIGR00549.1
GO:0004496 - mevalonate kinase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]; GO:0016126 - sterol biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF040647.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560002.1
GO:0016793 - triphosphoric monoester hydrolase activity [Evidence IEA]
deoxyguanosinetriphosphate triphosphohydrolase
COORDINATES: protein motif:HMM:NF001263.0
COORDINATES: similar to AA sequence:RefSeq:WP_013560005.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02273.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013560009.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560010.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560011.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560692.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558584.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560023.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560024.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560025.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
COORDINATES: protein motif:HMM:NF004051.0
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560325.1
COORDINATES: protein motif:HMM:NF015289.2
EutN/CcmL family microcompartment protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559149.1
ethanolamine utilization microcompartment protein EutM
COORDINATES: protein motif:HMM:NF011660.0
COORDINATES: similar to AA sequence:RefSeq:WP_013559154.1
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559837.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559836.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013559833.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561336.1
COORDINATES: protein motif:HMM:NF025112.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559827.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559826.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015102.2
DNA-directed RNA polymerase subunit alpha C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016291002.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560894.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560893.1
COORDINATES: protein motif:HMM:NF001126.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:TIGR00242.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_013560723.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:TIGR01143.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_013560727.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: protein motif:HMM:TIGR01133.1
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
COORDINATES: protein motif:HMM:NF014704.2
GO:0009403 - toxin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01082.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF010480.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560735.1
D-alanine--D-alanine ligase family protein
COORDINATES: protein motif:HMM:NF020067.2
FtsQ-type POTRA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560737.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560738.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560739.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560740.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013559758.1
COORDINATES: protein motif:HMM:NF028425.2
COORDINATES: protein motif:HMM:NF000840.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013559739.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559740.1
COORDINATES: protein motif:HMM:TIGR00456.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559742.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:NF014703.2
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00430.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559389.1
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: protein motif:HMM:NF025616.2
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF037564.2
DUF3048 C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF006396.0
bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013559618.1
GO:0008705 - methionine synthase activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF015586.2
COORDINATES: protein motif:HMM:TIGR00474.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559623.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_013559628.1
COORDINATES: protein motif:HMM:NF013592.2
polyheme membrane-associated cytochrome C
COORDINATES: protein motif:HMM:NF013918.2
ferric reductase-like transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF016246.2
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF028519.2
COORDINATES: protein motif:HMM:NF000823.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561519.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024589.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558844.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560385.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_001837006.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559689.1
cobalamin B12-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559688.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:1903826 - L-arginine transmembrane transport [Evidence IEA]; GO:0015819 - lysine transport [Evidence IEA]; GO:0015822 - ornithine transport [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: protein motif:HMM:NF003483.0
GO:0004815 - aspartate-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006422 - aspartyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560882.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0050066 - lysine 2,3-aminomutase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0046440 - L-lysine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00357.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:TIGR00401.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_013561065.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561431.1
COORDINATES: protein motif:HMM:NF022427.2
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560159.1
glycoside hydrolase family 38 C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF002872.1
GO:0006002 - fructose 6-phosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016292225.1
ECF-type riboflavin transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014003.2
S-adenosyl-l-methionine hydroxide adenosyltransferase family protein
COORDINATES: protein motif:HMM:TIGR00149.1
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: protein motif:HMM:TIGR03904.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF020904.2
COORDINATES: similar to AA sequence:RefSeq:WP_016290871.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00159.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558787.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560324.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03831.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561424.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561423.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561422.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_013560753.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015185.2
COORDINATES: protein motif:HMM:NF018000.2
COORDINATES: protein motif:HMM:NF017019.2
SurA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020055846.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013561044.1
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:NF017262.2
COORDINATES: protein motif:HMM:TIGR01198.1
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013705.2
COORDINATES: protein motif:HMM:NF014618.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559112.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01446.1
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559683.1
metal-sensitive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013559682.1
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002485948.1
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF001236.0
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561385.1
COORDINATES: protein motif:HMM:NF019323.2
COORDINATES: protein motif:HMM:NF025736.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558966.1
GO:0016407 - acetyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
COORDINATES: similar to AA sequence:RefSeq:WP_013558488.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560105.1
COORDINATES: protein motif:HMM:NF017368.2
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013868.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561350.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: protein motif:HMM:NF017864.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559361.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013413.2
GO:0070573 - metallodipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560896.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559771.1
COORDINATES: protein motif:HMM:NF001886.0
COORDINATES: similar to AA sequence:RefSeq:WP_013561179.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_013561177.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561162.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561164.1
COORDINATES: protein motif:HMM:NF012488.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559387.1
COORDINATES: protein motif:HMM:TIGR00276.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013380.2
tRNA-dihydrouridine synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559482.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559481.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013558784.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559608.1
COORDINATES: protein motif:HMM:TIGR00233.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
glycoside hydrolase family 3 C-terminal domain-containing protein
bifunctional glycosyltransferase/class I SAM-dependent methyltransferase
COORDINATES: protein motif:HMM:TIGR00472.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560878.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:TIGR00418.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF022623.2
COORDINATES: protein motif:HMM:NF025793.2
cytidine/deoxycytidylate deaminase family protein
COORDINATES: similar to AA sequence:RefSeq:NP_312930.1
COORDINATES: similar to AA sequence:RefSeq:WP_015618978.1
COORDINATES: protein motif:HMM:TIGR00964.1
COORDINATES: similar to AA sequence:RefSeq:WP_015539791.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_016293571.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560300.1
COORDINATES: protein motif:HMM:NF000955.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014167065.1
COORDINATES: protein motif:HMM:TIGR00498.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF014627.2
COORDINATES: protein motif:HMM:NF014624.2
COORDINATES: protein motif:HMM:NF013132.2
COORDINATES: protein motif:HMM:NF025150.2
COORDINATES: protein motif:HMM:TIGR00296.1
COORDINATES: protein motif:HMM:NF013670.2
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: protein motif:HMM:NF022896.2
COORDINATES: similar to AA sequence:RefSeq:WP_016291630.1
LytTR family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF017743.2
class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF003715.0
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561243.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558539.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558671.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:NF024968.2
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:TIGR01132.1
GO:0004614 - phosphoglucomutase activity [Evidence IEA]
phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
COORDINATES: protein motif:HMM:NF012478.2
COORDINATES: protein motif:HMM:NF014375.2
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF015755.2
COORDINATES: protein motif:HMM:NF017345.2
FdtA/QdtA family cupin domain-containing protein
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: protein motif:HMM:NF022441.2
COORDINATES: protein motif:HMM:NF013003.2
COORDINATES: protein motif:HMM:NF018684.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559012.1
sodium ion-translocating decarboxylase subunit beta
COORDINATES: protein motif:HMM:NF012584.2
COORDINATES: protein motif:HMM:NF016187.2
COORDINATES: protein motif:HMM:NF013225.2
COORDINATES: protein motif:HMM:NF016242.2
COORDINATES: protein motif:HMM:TIGR00331.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: protein motif:HMM:NF010738.0
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560886.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560885.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: protein motif:HMM:NF018076.2
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:TIGR01993.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559304.1
COORDINATES: protein motif:HMM:NF016764.2
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: protein motif:HMM:NF016206.2
COORDINATES: protein motif:HMM:NF023395.2
COORDINATES: protein motif:HMM:TIGR00237.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01280.1
COORDINATES: protein motif:HMM:NF014711.2
COORDINATES: similar to AA sequence:RefSeq:WP_016627252.1
COORDINATES: protein motif:HMM:TIGR04520.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014414.2
COORDINATES: similar to AA sequence:RefSeq:WP_002855280.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF037202.2
type ISP restriction/modification enzyme
COORDINATES: protein motif:HMM:NF013980.2
SprT family zinc-dependent metalloprotease
COORDINATES: protein motif:HMM:NF004012.0
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_013558627.1
COORDINATES: protein motif:HMM:NF014716.2
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_013561383.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559082.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559081.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559078.1
acylneuraminate cytidylyltransferase family protein
COORDINATES: protein motif:HMM:NF017011.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559076.1
N-acetylneuraminate synthase family protein
radical SAM/SPASM domain-containing protein
COORDINATES: protein motif:HMM:NF014409.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559065.1
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559063.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting)
COORDINATES: similar to AA sequence:RefSeq:WP_013561001.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559059.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559058.1
winged helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF015251.2
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00619.1
COORDINATES: protein motif:HMM:NF001413.0
COORDINATES: similar to AA sequence:RefSeq:WP_013560338.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560339.1
GO:0015232 - heme transmembrane transporter activity [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]; GO:0015886 - heme transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01189.1
GO:0015439 - ABC-type heme transporter activity [Evidence IEA]
GO:0015886 - heme transport [Evidence IEA]
heme ABC exporter ATP-binding protein CcmA
COORDINATES: protein motif:HMM:NF024645.2
COORDINATES: protein motif:HMM:TIGR00738.1
COORDINATES: protein motif:HMM:NF027681.2
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: protein motif:HMM:TIGR01498.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561128.1
COORDINATES: protein motif:HMM:NF039823.1
COORDINATES: protein motif:HMM:NF037510.2
COORDINATES: similar to AA sequence:RefSeq:WP_017370549.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558537.1
NAD/NADP-dependent octopine/nopaline dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013558538.1
bifunctional NUDIX hydrolase family protein/GNAT family N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013561250.1
COORDINATES: protein motif:HMM:TIGR01496.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01455.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014877.2
COORDINATES: protein motif:HMM:TIGR04336.1
COORDINATES: protein motif:HMM:NF023376.2
COORDINATES: protein motif:HMM:TIGR00621.2
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558531.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558532.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559204.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561274.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017534.2
COORDINATES: protein motif:HMM:NF024076.2
COORDINATES: protein motif:HMM:NF016114.2
COORDINATES: protein motif:HMM:NF015412.2
COORDINATES: protein motif:HMM:NF025065.2
sugar phosphate isomerase/epimerase family protein
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558637.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013143.2
metal ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013465.2
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012367.2
COORDINATES: similar to AA sequence:RefSeq:WP_016176834.1
COORDINATES: protein motif:HMM:NF037170.2
COORDINATES: protein motif:HMM:NF019121.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559696.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560320.1
COORDINATES: protein motif:HMM:NF019413.2
COORDINATES: protein motif:HMM:NF012739.2
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013559192.1
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560649.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00380
The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF011702.0
GO:0015444 - P-type magnesium transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00593.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559813.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558680.1
GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO:0019430 - removal of superoxide radicals [Evidence IEA]
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: protein motif:HMM:TIGR00138.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_013560703.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00318.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558886.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560311.1