Sphaerospermopsis kisseleviana NIES-73 plasmid plasmid1 DNA, complete genome.
Bacteria; Cyanobacteriota; Cyanophyceae; Nostocales; Aphanizomenonaceae; Sphaerospermopsis; Sphaerospermopsis kisseleviana.
Genome sequencing of cyanobaciteial culture collection at National Institute for Environmental Studies (NIES)
Submitted (23-JUN-2017) Contact:Yuu Hirose Toyohashi University of Technology, Department of Environmental and Life Sciences; Hibarigaoka-1-1 Tenpakucho, Toyohashi, Aichi 441-8122, Japan URL :http://mcc.nies.go.jp/ strainList.do?strainId=8&strainNumberEn=NIES-73
REFSEQ INFORMATION: The reference sequence was derived from\nAP018315.\nNBRP Genome Information Upgrading Program.: Genome sequencing of\ncyanobaciteial culture collection at National Institute for\nEnvironmental Studies (NIES).\n\nAnnotated using prokka 1.11 from http://www.vicbioinformatics.com.\nAnnotated at D-FAST https://dfast.nig.ac.jp\n\nAnnotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (released 2013). Information about the Pipeline can be\nfound here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: GS De Novo Assembler v. 2.9\nGenome Coverage :: 61x\nSequencing Technology :: Ilumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Date :: 09/28/2017 12:49:34\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS+\nAnnotation Software revision :: 4.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 5,146\nCDS (total) :: 5,086\nGenes (coding) :: 4,744\nCDS (coding) :: 4,744\nGenes (RNA) :: 60\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 44\nncRNAs :: 4\nPseudo Genes (total) :: 342\nPseudo Genes (ambiguous residues) :: 3 of 342\nPseudo Genes (frameshifted) :: 78 of 342\nPseudo Genes (incomplete) :: 226 of 342\nPseudo Genes (internal stop) :: 84 of 342\nPseudo Genes (multiple problems) :: 45 of 342\nCRISPR Arrays :: 11\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_015081662.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS+
Derived by automated computational analysis using gene prediction method: GeneMarkS+.
COORDINATES: similar to AA sequence:RefSeq:WP_076612256.1
COORDINATES: similar to AA sequence:RefSeq:WP_015116150.1
incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015217704.1
COORDINATES: similar to AA sequence:RefSeq:WP_015217705.1
COORDINATES: similar to AA sequence:RefSeq:WP_018399157.1
COORDINATES: similar to AA sequence:RefSeq:WP_016873842.1
COORDINATES: similar to AA sequence:RefSeq:WP_015217574.1
TIGR03985 family CRISPR-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_016949981.1
COORDINATES: similar to AA sequence:RefSeq:WP_016949982.1
COORDINATES: similar to AA sequence:RefSeq:WP_016949983.1
RAMP superfamily CRISPR-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_009455314.1
COORDINATES: similar to AA sequence:RefSeq:WP_019491841.1
COORDINATES: similar to AA sequence:RefSeq:WP_016949986.1
COORDINATES: similar to AA sequence:RefSeq:WP_009768149.1
TIGR03986 family CRISPR-associated RAMP protein
COORDINATES: similar to AA sequence:RefSeq:WP_009786203.1
COORDINATES: similar to AA sequence:RefSeq:WP_020479980.1
COORDINATES: similar to AA sequence:RefSeq:WP_015217582.1
COORDINATES: similar to AA sequence:RefSeq:WP_015217583.1
COORDINATES: similar to AA sequence:RefSeq:WP_015217584.1
DevR family CRISPR-associated autoregulator
COORDINATES: similar to AA sequence:RefSeq:WP_015217585.1
COORDINATES: similar to AA sequence:RefSeq:WP_015217586.1
CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
COORDINATES: similar to AA sequence:RefSeq:WP_006508683.1
COORDINATES: similar to AA sequence:RefSeq:WP_015783161.1
type I-D CRISPR-associated endonuclease Cas1d
COORDINATES: similar to AA sequence:RefSeq:WP_017750008.1
COORDINATES: similar to AA sequence:RefSeq:WP_015211374.1
COORDINATES: similar to AA sequence:RefSeq:WP_019495045.1
COORDINATES: similar to AA sequence:RefSeq:WP_016858615.1
COORDINATES: similar to AA sequence:RefSeq:WP_010994161.1
incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010994162.1
COORDINATES: similar to AA sequence:RefSeq:WP_015078275.1
COORDINATES: protein motif:HMM:PF05598.9
COORDINATES: similar to AA sequence:RefSeq:WP_015128032.1
COORDINATES: similar to AA sequence:RefSeq:WP_015128031.1
COORDINATES: similar to AA sequence:RefSeq:WP_015128030.1
COORDINATES: protein motif:HMM:PF13555.4
COORDINATES: similar to AA sequence:RefSeq:WP_016953403.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953402.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953400.1
COORDINATES: similar to AA sequence:RefSeq:WP_015111781.1
COORDINATES: similar to AA sequence:RefSeq:WP_015080762.1
COORDINATES: similar to AA sequence:RefSeq:WP_015081603.1
COORDINATES: similar to AA sequence:RefSeq:WP_006277545.1
COORDINATES: similar to AA sequence:RefSeq:WP_015081606.1
COORDINATES: similar to AA sequence:RefSeq:WP_015079890.1
COORDINATES: similar to AA sequence:RefSeq:WP_006098524.1
COORDINATES: similar to AA sequence:RefSeq:WP_017308219.1
COORDINATES: similar to AA sequence:RefSeq:WP_011153799.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011714700.1
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: similar to AA sequence:RefSeq:WP_015179276.1
COORDINATES: similar to AA sequence:RefSeq:WP_016876747.1
COORDINATES: similar to AA sequence:RefSeq:WP_006196051.1
COORDINATES: similar to AA sequence:RefSeq:WP_015115430.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_016876843.1
COORDINATES: similar to AA sequence:RefSeq:WP_016878809.1
COORDINATES: similar to AA sequence:RefSeq:WP_016878810.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
VapC toxin family PIN domain ribonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_015083086.1
COORDINATES: similar to AA sequence:RefSeq:WP_018398946.1
COORDINATES: similar to AA sequence:RefSeq:WP_015217732.1
COORDINATES: similar to AA sequence:RefSeq:WP_009342108.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953848.1
COORDINATES: similar to AA sequence:RefSeq:WP_015213367.1
COORDINATES: similar to AA sequence:RefSeq:WP_015217590.1
COORDINATES: similar to AA sequence:RefSeq:WP_015081661.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364359.1
COORDINATES: similar to AA sequence:RefSeq:WP_016948801.1
COORDINATES: similar to AA sequence:RefSeq:WP_015217612.1
COORDINATES: similar to AA sequence:RefSeq:WP_012411947.1
COORDINATES: similar to AA sequence:RefSeq:WP_015157740.1
COORDINATES: similar to AA sequence:RefSeq:WP_019494967.1
COORDINATES: similar to AA sequence:RefSeq:WP_016948809.1
COORDINATES: similar to AA sequence:RefSeq:WP_011319972.1
COORDINATES: similar to AA sequence:RefSeq:WP_015217614.1
COORDINATES: similar to AA sequence:RefSeq:WP_016876776.1
COORDINATES: similar to AA sequence:RefSeq:WP_012625942.1
COORDINATES: similar to AA sequence:RefSeq:WP_019506009.1
COORDINATES: similar to AA sequence:RefSeq:WP_012630627.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016873948.1
COORDINATES: similar to AA sequence:RefSeq:WP_015206561.1
COORDINATES: similar to AA sequence:RefSeq:WP_016878047.1
UTP--glucose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009547824.1
COORDINATES: similar to AA sequence:RefSeq:WP_016515139.1
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_005500299.1
COORDINATES: similar to AA sequence:RefSeq:WP_016948833.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015217873.1
COORDINATES: similar to AA sequence:RefSeq:WP_016952440.1
COORDINATES: similar to AA sequence:RefSeq:WP_009633294.1
COORDINATES: similar to AA sequence:RefSeq:WP_016872750.1
COORDINATES: similar to AA sequence:RefSeq:WP_015081614.1
COORDINATES: similar to AA sequence:RefSeq:WP_015213962.1
COORDINATES: similar to AA sequence:RefSeq:WP_015216204.1
COORDINATES: similar to AA sequence:RefSeq:WP_009455954.1
Spx/MgsR family RNA polymerase-binding regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_007783017.1
COORDINATES: similar to AA sequence:RefSeq:WP_015213397.1
COORDINATES: similar to AA sequence:RefSeq:WP_019494263.1
COORDINATES: similar to AA sequence:RefSeq:WP_006670689.1
COORDINATES: similar to AA sequence:RefSeq:WP_009627120.1
element excision factor XisI family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015080034.1
COORDINATES: similar to AA sequence:RefSeq:WP_015080029.1
COORDINATES: similar to AA sequence:RefSeq:WP_019497621.1
COORDINATES: similar to AA sequence:RefSeq:WP_006197897.1
COORDINATES: similar to AA sequence:RefSeq:WP_015216319.1
COORDINATES: protein motif:HMM:PF00067.20
COORDINATES: similar to AA sequence:RefSeq:WP_015213527.1
COORDINATES: similar to AA sequence:RefSeq:WP_017746798.1
COORDINATES: similar to AA sequence:RefSeq:WP_006194526.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364364.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364363.1
COORDINATES: similar to AA sequence:RefSeq:WP_006100303.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364353.1
COORDINATES: similar to AA sequence:RefSeq:WP_017313912.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364351.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364349.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364348.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364347.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364346.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364345.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953748.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364343.1
type IV secretion system DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016953750.1
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015364342.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364341.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364340.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364339.1
type III-B CRISPR module RAMP protein Cmr4
COORDINATES: similar to AA sequence:RefSeq:WP_015364338.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364337.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364336.1
type III-B CRISPR module RAMP protein Cmr1
COORDINATES: similar to AA sequence:RefSeq:WP_017654851.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364335.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953784.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364333.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364332.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364331.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953789.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364329.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953791.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364327.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364326.1
COORDINATES: similar to AA sequence:RefSeq:WP_002745189.1
COORDINATES: similar to AA sequence:RefSeq:WP_013191101.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015364325.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364324.1
DNA polymerase domain-containing protein
COORDINATES: protein motif:HMM:PF13646.4
COORDINATES: protein motif:HMM:PF02450.13
COORDINATES: protein motif:HMM:PF05419.10
COORDINATES: similar to AA sequence:RefSeq:WP_015364320.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953800.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364318.1
COORDINATES: similar to AA sequence:RefSeq:WP_006196492.1
COORDINATES: similar to AA sequence:RefSeq:WP_006196493.1
COORDINATES: similar to AA sequence:RefSeq:WP_015186390.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364313.1
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_017715215.1
Swt1 family HEPN domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015186392.1
COORDINATES: similar to AA sequence:RefSeq:WP_015186393.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953813.1
COORDINATES: similar to AA sequence:RefSeq:WP_015186395.1
COORDINATES: similar to AA sequence:RefSeq:WP_015186396.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364302.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364301.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364300.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953820.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364298.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953822.1
COORDINATES: similar to AA sequence:RefSeq:WP_015186406.1
plasmid mobilization relaxosome protein MobC
COORDINATES: similar to AA sequence:RefSeq:WP_015079137.1
COORDINATES: similar to AA sequence:RefSeq:WP_015203072.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015364295.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015364294.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364293.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364292.1
COORDINATES: similar to AA sequence:RefSeq:WP_016951334.1
COORDINATES: similar to AA sequence:RefSeq:WP_017288274.1
Rpn family recombination-promoting nuclease/putative transposase
COORDINATES: similar to AA sequence:RefSeq:WP_015364290.1
COORDINATES: similar to AA sequence:RefSeq:WP_012472346.1
COORDINATES: similar to AA sequence:RefSeq:WP_015186423.1
COORDINATES: similar to AA sequence:RefSeq:WP_017308460.1
COORDINATES: similar to AA sequence:RefSeq:WP_012162880.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863749.1
COORDINATES: similar to AA sequence:RefSeq:WP_016951842.1
COORDINATES: similar to AA sequence:RefSeq:WP_015079337.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364284.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015364283.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953837.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012168527.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953838.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364280.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364279.1
COORDINATES: protein motif:HMM:PF00589.20
COORDINATES: similar to AA sequence:RefSeq:WP_015081651.1
COORDINATES: similar to AA sequence:RefSeq:WP_009786238.1
COORDINATES: similar to AA sequence:RefSeq:WP_015081653.1
COORDINATES: similar to AA sequence:RefSeq:WP_015081654.1
COORDINATES: similar to AA sequence:RefSeq:WP_015081656.1
COORDINATES: similar to AA sequence:RefSeq:WP_015081657.1
COORDINATES: similar to AA sequence:RefSeq:WP_015210475.1
COORDINATES: protein motif:HMM:PF00145.15
COORDINATES: similar to AA sequence:RefSeq:WP_015081702.1
COORDINATES: similar to AA sequence:RefSeq:WP_009786283.1
COORDINATES: similar to AA sequence:RefSeq:WP_015155222.1
COORDINATES: similar to AA sequence:RefSeq:WP_000733641.1
COORDINATES: similar to AA sequence:RefSeq:WP_017653927.1
COORDINATES: protein motif:HMM:PF05729.10