Calothrix brevissima NIES-22 plasmid plasmid8 DNA, complete genome.
type: Entry
definition: Calothrix brevissima NIES-22 plasmid plasmid8 DNA, complete genome.
sequence version: NZ_AP018215.1
sequence date: 2017-09-29
sequence: sequence
division: CON
label: NZ_AP018215.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00079796
keyword: RefSeq
source: Calothrix brevissima NIES-22 (Calothrix brevissima SAG 34.79)
organism: Calothrix brevissima NIES-22
taxonomy: Bacteria; Cyanobacteriota; Cyanophyceae; Nostocales; Calotrichaceae; Calothrix.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence was derived from\nAP018215.\nNBRP Genome Information Upgrading Program.: Genome sequencing of\ncyanobaciteial culture collection at National Institute for\nEnvironmental Studies (NIES).\n\nAnnotated using prokka 1.11 from http://www.vicbioinformatics.com.\nAnnotated at D-FAST https://dfast.nig.ac.jp\n\nAnnotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (released 2013). Information about the Pipeline can be\nfound here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: GS De Novo Assembler v. 2.9\nGenome Coverage :: 90x\nSequencing Technology :: Ilumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Date :: 09/28/2017 12:53:55\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS+\nAnnotation Software revision :: 4.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 7,410\nCDS (total) :: 7,298\nGenes (coding) :: 6,977\nCDS (coding) :: 6,977\nGenes (RNA) :: 112\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 93\nncRNAs :: 4\nPseudo Genes (total) :: 321\nPseudo Genes (ambiguous residues) :: 0 of 321\nPseudo Genes (frameshifted) :: 52 of 321\nPseudo Genes (incomplete) :: 259 of 321\nPseudo Genes (internal stop) :: 55 of 321\nPseudo Genes (multiple problems) :: 37 of 321\nCRISPR Arrays :: 10\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 21270
topology: circular
so has quality: SO_0000988
location: 1..21270
location: region:1-21270:1
RO_0002162: 1973478

NZ_AP018215
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00079796
type: BioSample
SIO_000068: biosample

1
title: Genome sequencing of cyanobaciteial culture collection at National Institute for Environmental Studies (NIES)
author: Hirose, Y.
author: Shimura, Y.
author: Fujisawa, T.
author: Nakamura, Y.
author: Kawachi, M.
journal: Unpublished

2
title: Direct Submission
author: Hirose, Y.
author: Shimura, Y.
author: Fujisawa, T.
journal: Submitted (23-JUN-2017) Contact:Yuu Hirose Toyohashi University of Technology, Department of Environmental and Life Sciences; Hibarigaoka-1-1 Tenpakucho, Toyohashi, Aichi 441-8122, Japan URL :http://mcc.nies.go.jp/ strainList.do?strainId=27&strainNumberEn=NIES-22

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21270:1
position: 21270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21270:1:source
so part of: sequence
organism: Calothrix brevissima NIES-22
mol type: genomic DNA
strain: NIES-22
culture collection: NIES:22
plasmid: plasmid8

1973478
type: Taxonomy
SIO_000068: taxonomy

CA724_RS36935
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36935
so part of: sequence
location: 1458..1724
location: region:1458-1724:1
so has part: feature:1458-1724:1:exon
subclass of: SO_0000010

position:1458:1
position: 1458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1724:1
position: 1724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1458-1724:1:exon

CA724_RS36935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36935
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVGYKQIYRQQKTALSISDFCLIFKTAKISAFSALFQNIFLLAINPQSGHARPTSTKIKFWSSATQSLGLCSFLTMLVACLNRLDGY
SIO_010081: CA724_RS36935
subclass of: SO_0000673
so part of: CA724_RS36935
location: 1458..1724
location: region:1458-1724:1
so has part: feature:1458-1724:1:exon

WP_096649221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1458-1724:1:exon

CA724_RS36940
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36940
old locus tag: NIES22_73700
so part of: sequence
location: complement(1857..2360)
location: region:1857-2360:-1
so has part: feature:1857-2360:-1:exon
subclass of: SO_0000010

position:1857:-1
position: 1857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2360:-1
position: 2360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1857-2360:-1:exon

CA724_RS36940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36940
old locus tag: NIES22_73700
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLETIACFYSYENCQFVIGRVDEKGNLLVSGGGFHRKITLTECAKFLVNLSGFHKPIWINKHEPLKRSLKQSVSGEVDFKEEDQELQDLFQSLRHEKKIKMLDPNLEAVKSELPLALRILVKALLMELSYGGFVGGVPENCVVQLGGEMTEAEKIVKMWDDLIFNAL
SIO_010081: CA724_RS36940
subclass of: SO_0000673
so part of: CA724_RS36940
location: complement(1857..2360)
location: region:1857-2360:-1
so has part: feature:1857-2360:-1:exon

WP_096649224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1857-2360:-1:exon

CA724_RS36945
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36945
old locus tag: NIES22_73710
so part of: sequence
location: complement(2360..3826)
location: region:2360-3826:-1
so has part: feature:2360-3826:-1:exon
subclass of: SO_0000010

position:3826:-1
position: 3826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2360-3826:-1:exon

CA724_RS36945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36945
old locus tag: NIES22_73710
inference: COORDINATES: protein motif:HMM:PF03237.13
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Terminase-like family protein
translation: MAISTARLRALEKKARTKLIGQNLLKKVPDNWEEFVRLCTIRSGGKMVQFVPYEFQRILIRLRQQYPNIVLIKSRQLGVTQSVASDDLKDACTNPASSSVFFMRNGDDVGSLSRRIKQMLQGLKEYVTPANDSVGYIKINNLGDIYIKNSSREGIRSLDSITNQTYDESAFIENIESIYAASNAASALVGDNVKKMIISTPSAKMGWYWGQLSQNNNDDIEEICKQVAEGHLYKDIPGFYYFVDSAGVLKVVLHWRCHPVYRQIDKEYPGGYLTYRMKQDNCDEEIVLREYDLRFIDSSVAVFTSDLVRASAVGEWEDIRDFTAEYFIGIDTATLGSDYCVAIVLKKKSEQYSVVAMHRKRQQTSVYNLFEIGRLIEKYKPDRISVETTGGVGVLYLESLTREFPGYSFEAIKTTGDSKPTMVSGLQLVLEKNCLIYPAKSPIKDELLSFRRLGNKLEASSGQHDDTVMALCFALVVAQNHSSTWSLI
SIO_010081: CA724_RS36945
subclass of: SO_0000673
so part of: CA724_RS36945
location: complement(2360..3826)
location: region:2360-3826:-1
so has part: feature:2360-3826:-1:exon

WP_096649227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2360-3826:-1:exon

CA724_RS36950
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36950
old locus tag: NIES22_73720
so part of: sequence
location: complement(3807..4094)
location: region:3807-4094:-1
so has part: feature:3807-4094:-1:exon
subclass of: SO_0000010

position:3807:-1
position: 3807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4094:-1
position: 4094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3807-4094:-1:exon

CA724_RS36950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36950
old locus tag: NIES22_73720
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKSTINRWAIQPNFKAMLRDAVVQSYDAAIAELVSGSREAAKELKAIITDPDTPKRVKVSAIQVLLTTAAKVKESALEERLEAIEAALDGDINS
SIO_010081: CA724_RS36950
subclass of: SO_0000673
so part of: CA724_RS36950
location: complement(3807..4094)
location: region:3807-4094:-1
so has part: feature:3807-4094:-1:exon

WP_096649230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3807-4094:-1:exon

CA724_RS36955
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36955
old locus tag: NIES22_73730
so part of: sequence
location: complement(4203..4547)
location: region:4203-4547:-1
so has part: feature:4203-4547:-1:exon
subclass of: SO_0000010

position:4203:-1
position: 4203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4547:-1
position: 4547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4203-4547:-1:exon

CA724_RS36955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36955
old locus tag: NIES22_73730
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGEAKRRKKLDANYGKPKFDPDLPNWVLEDEWDTQDALKGQTLADCLACVGIETAKHFRERLQKAVDDDFVFAPDFQNSPNDDEFNRVKAIATHTGEISIQERWLIKYSQTRIK
SIO_010081: CA724_RS36955
subclass of: SO_0000673
so part of: CA724_RS36955
location: complement(4203..4547)
location: region:4203-4547:-1
so has part: feature:4203-4547:-1:exon

WP_096649234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4203-4547:-1:exon

CA724_RS36960
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36960
old locus tag: NIES22_73740
so part of: sequence
location: complement(4556..8044)
location: region:4556-8044:-1
so has part: feature:4556-8044:-1:exon
subclass of: SO_0000010

position:4556:-1
position: 4556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8044:-1
position: 8044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4556-8044:-1:exon

CA724_RS36960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36960
old locus tag: NIES22_73740
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGFTLFRRGECPVCNGSAKGCRQSSLTGLIFCRSHEAQPTNHIYRGEDVHGFGLWQAVEDAQAFTSQASEERERRRREFLEAEEHRRQLQIQKQLPANKRNKWYRLLLNELTLSDSDFLKLLERGFTPEQIINDGYKSVRAWQKLSNSFPSNLPGVLPNGVLNVSGDGILCPFSNKNSLIVSCQVRLHEATDGKCRWLTSSTKKNPEGATSHLNGELPIGVFEPENFTGDSIWLTEGTSIKPSLTRYRLGVPVLGASGGRFDGSPETSRQSVAYLCEKYRTKLLTFAVDAGDVVNRSGVPQRWKQQIEFFSSLGYECRIAWWNQITKDDCDIDELEDYSQIEFISLDEFLSIANQQQQDIPKSQQIKTTDSTEWQQEYEAERSDRAKFKFTRKPDVEISEGYLPTYNLSALPPGIIAIKGDWGIGKSFFTGNLAKQWEGKILQLAHLNAILHNTAPKYDLLHHHEAKSLNLSLTSVPRLAICDVTLAANFSPEHWAKGEPFILIWDEVCQGLKSLHTSPNLRGNLRVKARVKIEWLIKNATYIVLADRDLDDETISYIESVRGVNKSFIIHHIGKKGKTRKPITINTNKRKDEKLSQLIKDAKAGLKIAVACETKSDLLALEKLLIDAKIPESAMFFAHGDNSNEPHIKAVIETIDSQYTDYQILGYTMTMGTAVSLEKEHFDKVYAFFPGDVLAASEHCQMLFRNRPDCEIEIWVSPRRRSLEIDPSKLLNNLKITTNETNQLVTSIDEIDKLHKQGILPTARGEITSDDLPFLQHKLNIITRANASKANPFQSLYDLLLEAGFTINLECTDTEESARTDDGEIHSEQKQVIKEENDRLIAQAELMSDAEFEAAKLNAGSLRKSERDRLQKTQLHRDTGLEITKDIVKLQRTKKLTRGAKMLKVLLGDDATAASYDIVDRERNPDIGDQNFFAAKRRLLLDLGTDELIAKLRDGWTYTKDSPEIQEFGDRVRQQKADVKRLLGFKVSLERNSKGNFKISNAELLGRVLDSMCILRSSEKHRVLGRIYSLNTQHWETLEKIMAHMDTQAHTPTLQGVIEKAKLEASQDTSSQTHEGTDMNEQITVNSQQSMVNGQQSTTESDWITEESLQEVAAQLDYCQNPEMLNQLRGFTPPEALKLAARRLPPEKRELIRQWVINTAA
SIO_010081: CA724_RS36960
subclass of: SO_0000673
so part of: CA724_RS36960
location: complement(4556..8044)
location: region:4556-8044:-1
so has part: feature:4556-8044:-1:exon

WP_096649237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4556-8044:-1:exon

CA724_RS36965
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36965
so part of: sequence
location: complement(8199..8450)
location: region:8199-8450:-1
so has part: feature:8199-8450:-1:exon
subclass of: SO_0000010

position:8199:-1
position: 8199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8450:-1
position: 8450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8199-8450:-1:exon

CA724_RS36965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36965
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLENNINSAVRTGTPQHNSKKAYLVSIITVLTRISQCWRYKRLTQAVHRRELTTSLEILAQSQIEDDLALFIIANFQSLGGAS
SIO_010081: CA724_RS36965
subclass of: SO_0000673
so part of: CA724_RS36965
location: complement(8199..8450)
location: region:8199-8450:-1
so has part: feature:8199-8450:-1:exon

WP_096649240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8199-8450:-1:exon

CA724_RS36970
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36970
old locus tag: NIES22_73750
so part of: sequence
location: complement(8696..9271)
location: region:8696-9271:-1
so has part: feature:8696-9271:-1:exon
subclass of: SO_0000010

position:8696:-1
position: 8696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9271:-1
position: 9271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8696-9271:-1:exon

CA724_RS36970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36970
old locus tag: NIES22_73750
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDYCLALYAVISWGWKYIREKLEDEIEDFPSNPGEMFDLILQSEALGFLSSCVFPEYLASGNYYYEFSPRKTYNFYKKSSKVEQLRKSGKKLTKKDKILVQKHLEEISKKKLEIAHFYKWFNLCIQVCEKAKTKDKVLKNRLEELSRKSREIRNKILSMYHPRKAPPGHAINNGVRLPATKGAYLNVSLQS
SIO_010081: CA724_RS36970
subclass of: SO_0000673
so part of: CA724_RS36970
location: complement(8696..9271)
location: region:8696-9271:-1
so has part: feature:8696-9271:-1:exon

WP_096649245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8696-9271:-1:exon

CA724_RS36975
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36975
old locus tag: NIES22_73760
so part of: sequence
location: complement(9752..10084)
location: region:9752-10084:-1
so has part: feature:9752-10084:-1:exon
subclass of: SO_0000010

position:9752:-1
position: 9752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10084:-1
position: 10084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9752-10084:-1:exon

CA724_RS36975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36975
old locus tag: NIES22_73760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010999657.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNTPQDTPSRLDRIEATLERIAHQQATTNVILAELAQRQSNTQEQLDSLLNTATTIFNRDAVLNDVLLELRDSHETHQRNFEEHQQTTNAALNQLGAILVQLTRINPPN
SIO_010081: CA724_RS36975
subclass of: SO_0000673
so part of: CA724_RS36975
location: complement(9752..10084)
location: region:9752-10084:-1
so has part: feature:9752-10084:-1:exon

WP_096649248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9752-10084:-1:exon

CA724_RS36980
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36980
old locus tag: NIES22_73770
so part of: sequence
location: complement(10081..10305)
location: region:10081-10305:-1
so has part: feature:10081-10305:-1:exon
subclass of: SO_0000010

position:10081:-1
position: 10081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10305:-1
position: 10305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10081-10305:-1:exon

CA724_RS36980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36980
old locus tag: NIES22_73770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017747372.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTESPNPETLEAVKSFATALNSFAWNADYIKFCEVLGFTPDSYAEEKYKQFRELVSYLDCFDHESLAKMIEAGK
SIO_010081: CA724_RS36980
subclass of: SO_0000673
so part of: CA724_RS36980
location: complement(10081..10305)
location: region:10081-10305:-1
so has part: feature:10081-10305:-1:exon

WP_096649251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10081-10305:-1:exon

CA724_RS36985
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36985
old locus tag: NIES22_73780
so part of: sequence
location: complement(10302..10499)
location: region:10302-10499:-1
so has part: feature:10302-10499:-1:exon
subclass of: SO_0000010

position:10302:-1
position: 10302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10499:-1
position: 10499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10302-10499:-1:exon

CA724_RS36985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36985
old locus tag: NIES22_73780
inference: COORDINATES: protein motif:HMM:PF07878.9
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix protein, CopG family
translation: MNTDNTMSGRVNVVLPDEVYETVKNLAGTERRSQSQMAAILIEEALEARKLLQKTPSPDQGKGVA
SIO_010081: CA724_RS36985
subclass of: SO_0000673
so part of: CA724_RS36985
location: complement(10302..10499)
location: region:10302-10499:-1
so has part: feature:10302-10499:-1:exon

WP_096649254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10302-10499:-1:exon

CA724_RS36990
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36990
old locus tag: NIES22_73790
so part of: sequence
location: 10651..11259
location: region:10651-11259:1
so has part: feature:10651-11259:1:exon
subclass of: SO_0000010

position:10651:1
position: 10651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11259:1
position: 11259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10651-11259:1:exon

CA724_RS36990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36990
old locus tag: NIES22_73790
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNQTPSVIEIEATEITEETGIETPIELQIEAESNHESLFDSWVLSAVARELTGLDKSAFQRSISSLIDNYKIPVDLLRRGEGKNTQYSDYAVELVKAVRSADKTSIESLLKFSPKPTQQANCSALATVNKNNQLARQSDAKTVENFTQAKQNLNAGMQNWRMLGASLAAKVSKEIKAGFAEQFNSEMQDLGVQAQDVFNLE
SIO_010081: CA724_RS36990
subclass of: SO_0000673
so part of: CA724_RS36990
location: 10651..11259
location: region:10651-11259:1
so has part: feature:10651-11259:1:exon

WP_096649257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10651-11259:1:exon

CA724_RS36995
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36995
old locus tag: NIES22_73800
so part of: sequence
location: 11270..11500
location: region:11270-11500:1
so has part: feature:11270-11500:1:exon
subclass of: SO_0000010

position:11270:1
position: 11270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11500:1
position: 11500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11270-11500:1:exon

CA724_RS36995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36995
old locus tag: NIES22_73800
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADKNIEIEIDFKVGLATGSVTIATTNYPSSGEDFQIFINMIKQELGTDKTVLVTAYRPVKKAFEVTKIEDLLGKK
SIO_010081: CA724_RS36995
subclass of: SO_0000673
so part of: CA724_RS36995
location: 11270..11500
location: region:11270-11500:1
so has part: feature:11270-11500:1:exon

WP_096649260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11270-11500:1:exon

CA724_RS37000
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS37000
old locus tag: NIES22_73810
so part of: sequence
location: 11500..11784
location: region:11500-11784:1
so has part: feature:11500-11784:1:exon
subclass of: SO_0000010

position:11784:1
position: 11784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11500-11784:1:exon

CA724_RS37000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS37000
old locus tag: NIES22_73810
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLTINKSHDGYINAIASQMGTTPQNALNFMMWKLRESNYNFGDSLPQCPMPHAQQPQIQFTPKSPQAIEEFEQLQAETDPVIERLLALGLESF
SIO_010081: CA724_RS37000
subclass of: SO_0000673
so part of: CA724_RS37000
location: 11500..11784
location: region:11500-11784:1
so has part: feature:11500-11784:1:exon

WP_096649263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11500-11784:1:exon

CA724_RS37005
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS37005
old locus tag: NIES22_73830
so part of: sequence
location: 11938..12204
location: region:11938-12204:1
so has part: feature:11938-12204:1:exon
subclass of: SO_0000010

position:11938:1
position: 11938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12204:1
position: 12204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11938-12204:1:exon

CA724_RS37005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS37005
old locus tag: NIES22_73830
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSYRIIALTGLIVLALISPAQAQTDNPHKLVINRITRGNRVCNRIYNNFLIKSHRQFLNRNCKKWGLGRAVDLVTGDKQQVLQPLQR
SIO_010081: CA724_RS37005
subclass of: SO_0000673
so part of: CA724_RS37005
location: 11938..12204
location: region:11938-12204:1
so has part: feature:11938-12204:1:exon

WP_096649266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11938-12204:1:exon

CA724_RS37010
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS37010
old locus tag: NIES22_73840
so part of: sequence
location: 12296..12565
location: region:12296-12565:1
so has part: feature:12296-12565:1:exon
subclass of: SO_0000010

position:12296:1
position: 12296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12565:1
position: 12565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12296-12565:1:exon

CA724_RS37010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS37010
old locus tag: NIES22_73840
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MISQITTAKSRDLATVEKCLLDAELALAEAYTAVLRLKEANQIIDDRIITYVADAWHYSTEAIRLIEAANETLLPNMRQANTTSASAQG
SIO_010081: CA724_RS37010
subclass of: SO_0000673
so part of: CA724_RS37010
location: 12296..12565
location: region:12296-12565:1
so has part: feature:12296-12565:1:exon

WP_096649269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12296-12565:1:exon

CA724_RS37015
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS37015
old locus tag: NIES22_73850
so part of: sequence
location: 12630..13415
location: region:12630-13415:1
so has part: feature:12630-13415:1:exon
subclass of: SO_0000010

position:12630:1
position: 12630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13415:1
position: 13415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12630-13415:1:exon

CA724_RS37015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS37015
old locus tag: NIES22_73850
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARPRGGLTNSKRFQKPEVENTNPLQVVGGIASGIGQATQSVANAVQATTNGLHAVNNGLKSVKQAFNGGSSLVTDNAKSALDQALKVGNQYGIEQINLSEFITGNPYQASDSIPEMKAADANREKLKIQRQNNALDVRLERIKQNRKITTIATEERRLLGDLVDFETVGIETATKVVKNQIADTRYRIEQSKLEQTEEQLQQQQIATQGTLNLTEGIRLEWQLKLENQQAKNDRLRLDIEGAIKDNDRRREELEARLLEA
SIO_010081: CA724_RS37015
subclass of: SO_0000673
so part of: CA724_RS37015
location: 12630..13415
location: region:12630-13415:1
so has part: feature:12630-13415:1:exon

WP_096649272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12630-13415:1:exon

CA724_RS37020
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS37020
old locus tag: NIES22_73860
so part of: sequence
location: 13475..16057
location: region:13475-16057:1
so has part: feature:13475-16057:1:exon
subclass of: SO_0000010

position:13475:1
position: 13475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16057:1
position: 16057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13475-16057:1:exon

CA724_RS37020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS37020
old locus tag: NIES22_73860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017308019.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYINFKKASRSISVVAAIICIGGFASFIKSDSSTNKALALNIIISSGAIAVGNQLLAKHYQSVGNDQITPIIQQKDKQISDADKQFNALKDKYSKQTSALNEVREITSKQSSEIEAKNNAINILNSQIKLLHSELVSQSAEIERKLQEDDTRFTQVLTEFKQALATDLSERIYQVYNGLQKSIDAKLASSDYEAVHPQLENFSEKLEASYSAHCEMLASIPQLEGDWQSIVKQAIEIYSRISDQITTLKVRYRNLLNTDERLSLEIACQRLEASVPKDKAREILNQFSQGSKSDLEELLVKIDDNQNSLEEMRGQVSDLLNHIDSKNLEIAKLNQQIAELKRPQYWSYAVRPDLGMANGIIQYFEKLGIVLDRAGSNYQGWYADLSFHAHRNGDRVTLSALNTHWERLAPQLHCLNQPEFKYDAESDLFTCTVWLTRKPVKSIEQKVSDFKPTLAKADELINFVSTAYHIGLWGETGTGKSTAISNIIGGLIASLGGSPKLKLTIPKLDNDTQKIFPSVDYLGIPESIFGLLEAALEIQFRISLSEQAFRNGETIPEYEPIVFFIDEINAIFTRWGKINDADLENVLGRFTLSLSGERLNYFNQFMREELENYKNEFAKTLLKFIWQTGRSLNVKSLIAGQNLQPGAFRVMVNDIANCAYIALGDAIKPCIGYKVKEVHQDSITSQYNTLQDCLIHDSSLRFAALYCPSVGKAYLGELPPPNYYQWDANLLLSVNSNLSSVENAIINNKILVQQGLDEISNNKTTLDGSLDGFLDNVQSRLKQETMHQESFRRFVQESKLPKKFQNLGYEALLQLWTKLPKKADGSVMKTKAYSDVFEVKRSEDRKIVSEFINYLEAEFK
SIO_010081: CA724_RS37020
subclass of: SO_0000673
so part of: CA724_RS37020
location: 13475..16057
location: region:13475-16057:1
so has part: feature:13475-16057:1:exon

WP_096649274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13475-16057:1:exon

CA724_RS37025
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS37025
old locus tag: NIES22_73870
so part of: sequence
location: 16054..16281
location: region:16054-16281:1
so has part: feature:16054-16281:1:exon
subclass of: SO_0000010

position:16054:1
position: 16054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16281:1
position: 16281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16054-16281:1:exon

CA724_RS37025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS37025
old locus tag: NIES22_73870
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIEVMVKFVDNSSENFMAYFSRVPNTGDFIAPSSQFGEYPCCRVIKVFHYPFKGENTDGLIAGLVEVEAVVSQLK
SIO_010081: CA724_RS37025
subclass of: SO_0000673
so part of: CA724_RS37025
location: 16054..16281
location: region:16054-16281:1
so has part: feature:16054-16281:1:exon

WP_096649277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16054-16281:1:exon

CA724_RS37030
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS37030
old locus tag: NIES22_73880
so part of: sequence
location: 16292..16534
location: region:16292-16534:1
so has part: feature:16292-16534:1:exon
subclass of: SO_0000010

position:16292:1
position: 16292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16534:1
position: 16534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16292-16534:1:exon

CA724_RS37030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS37030
old locus tag: NIES22_73880
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDSDYSDYPVYKITVVYDDELENRPDDEIYIAYVDGDLLDCITAMNLSEDSETMAEKLIHRPQKVDWYLSPAGVIYLGD
SIO_010081: CA724_RS37030
subclass of: SO_0000673
so part of: CA724_RS37030
location: 16292..16534
location: region:16292-16534:1
so has part: feature:16292-16534:1:exon

WP_096649280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16292-16534:1:exon

CA724_RS37035
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS37035
old locus tag: NIES22_73890
so part of: sequence
location: 16592..16846
location: region:16592-16846:1
so has part: feature:16592-16846:1:exon
subclass of: SO_0000010

position:16592:1
position: 16592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16846:1
position: 16846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16592-16846:1:exon

CA724_RS37035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS37035
old locus tag: NIES22_73890
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKNQIEHPALKILYTYVIQDCYAQLEKNSQDIELHNEQVERLKKNLIHIEAERSRLQKRIAELEEIFEIKPKVESEAKPAQLI
SIO_010081: CA724_RS37035
subclass of: SO_0000673
so part of: CA724_RS37035
location: 16592..16846
location: region:16592-16846:1
so has part: feature:16592-16846:1:exon

WP_096649283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16592-16846:1:exon

CA724_RS37040
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS37040
old locus tag: NIES22_73910
so part of: sequence
location: 17267..19006
location: region:17267-19006:1
so has part: feature:17267-19006:1:exon
subclass of: SO_0000010

position:17267:1
position: 17267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19006:1
position: 19006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17267-19006:1:exon

CA724_RS37040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS37040
old locus tag: NIES22_73910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015211440.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protelomerase family protein
translation: MSKALQEQVNKLFEATKDLQSLEEIKPHCEQFNEWMNTNTTYSIDSLGTVLSRVGFYKKFKSLKLEQGKNADSVPKHDKAGNVVAYELKHYCLLLCGLDKKDWEARNETTRVSDRVTATNEDGSIGIEIKPGEYIGITAQLLESDNPHELAVGLIAATGRRPHEILARGKFAPVDGESYQAMFEGQGKKRGEKPVFKISTLFPASYVIERFNHLRKDASIKELLKQVSNEFPRDVAAQNKAIEDKRGNSLRRVVQEFFGGKDSKEPLLNFRHGQDQNDCKALRAACAALVTDRDCKGAIGAKMYFAASFLGHITPGEKISDSDLKHIATTLGYSDYYVTEPVSFPDAPEKAKPTNVKALPEDLEVIKNLQAELNLNSQHEVVHLLLEKYNLVTRLTKELAQANKKIDELSTRNKQLQQESKEMEVTETQTITIDRNELEALIDARLEAKLNQLPSGAESKPVVIKEVTKVQPKQDDRDWESVSSEELKKLKSAGAIDEKLMRCFAAIKTHNSTVATSDDDRWYVGNAVLRELSGCNGQVIAKWLEAHNDEVTSHNEAYGLGQYHNKRHKGKSITDVVSW
SIO_010081: CA724_RS37040
subclass of: SO_0000673
so part of: CA724_RS37040
location: 17267..19006
location: region:17267-19006:1
so has part: feature:17267-19006:1:exon

WP_096649286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17267-19006:1:exon

CA724_RS37045
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS37045
old locus tag: NIES22_73920
so part of: sequence
location: 19064..19906
location: region:19064-19906:1
so has part: feature:19064-19906:1:exon
subclass of: SO_0000010

position:19064:1
position: 19064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19906:1
position: 19906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19064-19906:1:exon

CA724_RS37045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS37045
old locus tag: NIES22_73920
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDFIKMSTEPTQKEQATENQQNSTPTEIFQAIGVITGDVTFIFVEEKNRYIANITIGNYKYNLLPLGSSRTKSASFNGLRKQIETTGISRHKLIVYPKITHYPGRDQQHRIAFQLLAFEKENIDSPIKLNDMEFKLSGLWQFIPVCRTPCITVMKNFSEERLEYIKQAELASKVNFMKASHIPLMWKDAPVNPFRFNPKLEKEQQGKAMFVSIKARFIPGKDMFGFDSLLAMPQDEPPKHLKAGKKDKAEVLKSKMARKREGARKEPIKVTIKPKLKPKS
SIO_010081: CA724_RS37045
subclass of: SO_0000673
so part of: CA724_RS37045
location: 19064..19906
location: region:19064-19906:1
so has part: feature:19064-19906:1:exon

WP_096649289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19064-19906:1:exon

CA724_RS37050
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS37050
so part of: sequence
location: 19913..20122
location: region:19913-20122:1
so has part: feature:19913-20122:1:exon
subclass of: SO_0000010

position:19913:1
position: 19913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20122:1
position: 20122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19913-20122:1:exon

CA724_RS37050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS37050
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPCLQKLKKPKNPVKGKDDRVNPDSLVPVNQVAGKIRKREEPTTQSPHAETIRAVGLILGIKQGLVVG
SIO_010081: CA724_RS37050
subclass of: SO_0000673
so part of: CA724_RS37050
location: 19913..20122
location: region:19913-20122:1
so has part: feature:19913-20122:1:exon

WP_096649292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19913-20122:1:exon