Calothrix brevissima NIES-22 plasmid plasmid7 DNA, complete genome.
type: Entry
definition: Calothrix brevissima NIES-22 plasmid plasmid7 DNA, complete genome.
sequence version: NZ_AP018214.1
sequence date: 2017-09-29
sequence: sequence
division: CON
label: NZ_AP018214.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00079796
keyword: RefSeq
source: Calothrix brevissima NIES-22 (Calothrix brevissima SAG 34.79)
organism: Calothrix brevissima NIES-22
taxonomy: Bacteria; Cyanobacteriota; Cyanophyceae; Nostocales; Calotrichaceae; Calothrix.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence was derived from\nAP018214.\nNBRP Genome Information Upgrading Program.: Genome sequencing of\ncyanobaciteial culture collection at National Institute for\nEnvironmental Studies (NIES).\n\nAnnotated using prokka 1.11 from http://www.vicbioinformatics.com.\nAnnotated at D-FAST https://dfast.nig.ac.jp\n\nAnnotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (released 2013). Information about the Pipeline can be\nfound here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: GS De Novo Assembler v. 2.9\nGenome Coverage :: 90x\nSequencing Technology :: Ilumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Date :: 09/28/2017 12:53:55\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS+\nAnnotation Software revision :: 4.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 7,410\nCDS (total) :: 7,298\nGenes (coding) :: 6,977\nCDS (coding) :: 6,977\nGenes (RNA) :: 112\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 93\nncRNAs :: 4\nPseudo Genes (total) :: 321\nPseudo Genes (ambiguous residues) :: 0 of 321\nPseudo Genes (frameshifted) :: 52 of 321\nPseudo Genes (incomplete) :: 259 of 321\nPseudo Genes (internal stop) :: 55 of 321\nPseudo Genes (multiple problems) :: 37 of 321\nCRISPR Arrays :: 10\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 25761
topology: circular
so has quality: SO_0000988
location: 1..25761
location: region:1-25761:1
RO_0002162: 1973478

NZ_AP018214
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00079796
type: BioSample
SIO_000068: biosample

1
title: Genome sequencing of cyanobaciteial culture collection at National Institute for Environmental Studies (NIES)
author: Hirose, Y.
author: Shimura, Y.
author: Fujisawa, T.
author: Nakamura, Y.
author: Kawachi, M.
journal: Unpublished

2
title: Direct Submission
author: Hirose, Y.
author: Shimura, Y.
author: Fujisawa, T.
journal: Submitted (23-JUN-2017) Contact:Yuu Hirose Toyohashi University of Technology, Department of Environmental and Life Sciences; Hibarigaoka-1-1 Tenpakucho, Toyohashi, Aichi 441-8122, Japan URL :http://mcc.nies.go.jp/ strainList.do?strainId=27&strainNumberEn=NIES-22

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25761:1
position: 25761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25761:1:source
so part of: sequence
organism: Calothrix brevissima NIES-22
mol type: genomic DNA
strain: NIES-22
culture collection: NIES:22
plasmid: plasmid7

1973478
type: Taxonomy
SIO_000068: taxonomy

CA724_RS36825
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36825
old locus tag: NIES22_73440
so part of: sequence
location: 73..1023
location: region:73-1023:1
so has part: feature:73-1023:1:exon
subclass of: SO_0000010

position:73:1
position: 73
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023:1
position: 1023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73-1023:1:exon

CA724_RS36825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36825
old locus tag: NIES22_73440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015211863.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MNPKKRTTQPYQIKGVDALFGSDEPINESAAVLISIEQIVLPQQQPRRYFAPQSMHDLVESIKQYGILQPLLVRPQKDGKYELVAGERRFQAAKTVQLESVPAVIRQMTDVEAFELALSENLQREDLNPVEETEGIIALLALKLNQTAESVIALLTSAAHPEREAVDNVIHSNEWQTLLEVFNSIGKFSPESFRTNRLPLLKLPQDIMEALRSGMIEYTKAKVIARVKDESLRASLLDDAIQNDLSLSQIKERLAVIKAETTGVNEKKSPGIKKQIDEAYTKVKKSKVWDNPKKQKRLQKLLAELEALIVEESNDS
SIO_010081: CA724_RS36825
subclass of: SO_0000673
so part of: CA724_RS36825
location: 73..1023
location: region:73-1023:1
so has part: feature:73-1023:1:exon

WP_096649158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73-1023:1:exon

CA724_RS36830
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36830
old locus tag: NIES22_73450
so part of: sequence
location: 1107..1334
location: region:1107-1334:1
so has part: feature:1107-1334:1:exon
subclass of: SO_0000010

position:1107:1
position: 1107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334:1
position: 1334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1107-1334:1:exon

CA724_RS36830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36830
old locus tag: NIES22_73450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015081667.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKIKTFAENYPHLTRFVNEIGWIEIGESEYVNSFARAYDLGGTVYEGKPNYSSLEAAFQDLEAAIKKYLEDNGI
SIO_010081: CA724_RS36830
subclass of: SO_0000673
so part of: CA724_RS36830
location: 1107..1334
location: region:1107-1334:1
so has part: feature:1107-1334:1:exon

WP_096649161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1107-1334:1:exon

CA724_RS36835
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36835
old locus tag: NIES22_73460
so part of: sequence
location: complement(1508..1732)
location: region:1508-1732:-1
so has part: feature:1508-1732:-1:exon
subclass of: SO_0000010

position:1508:-1
position: 1508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1732:-1
position: 1732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1508-1732:-1:exon

CA724_RS36835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36835
old locus tag: NIES22_73460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017743913.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTQHDIIKQGYDALINSLGVADTIRFIQYFSPGKGDYTKERHQWLDEKTLVDVLEEIKELPSEDTNQYDEIIE
SIO_010081: CA724_RS36835
subclass of: SO_0000673
so part of: CA724_RS36835
location: complement(1508..1732)
location: region:1508-1732:-1
so has part: feature:1508-1732:-1:exon

WP_096649164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1508-1732:-1:exon

CA724_RS36840
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36840
old locus tag: NIES22_73470
so part of: sequence
location: complement(1716..2201)
location: region:1716-2201:-1
so has part: feature:1716-2201:-1:exon
subclass of: SO_0000010

position:1716:-1
position: 1716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2201:-1
position: 2201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1716-2201:-1:exon

CA724_RS36840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36840
old locus tag: NIES22_73470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006529431.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MSKQYKIYLDACCLNRPFDDQTQPRIYLEAQAVMTILSQCQLGTWKLINSSALIAELNQTPDLSRLENVKKLLGIAKIKVINSAFIENRAAELQQLGFSSYDATHIASAERSQADVFLTTDDRLFKKAQKNSQLINVKINNPVQWLALVIQAEESNDENPT
SIO_010081: CA724_RS36840
subclass of: SO_0000673
so part of: CA724_RS36840
location: complement(1716..2201)
location: region:1716-2201:-1
so has part: feature:1716-2201:-1:exon

WP_096649167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1716-2201:-1:exon

CA724_RS36845
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36845
old locus tag: NIES22_73480
so part of: sequence
location: 2664..3770
location: region:2664-3770:1
so has part: feature:2664-3770:1:exon
subclass of: SO_0000010

position:2664:1
position: 2664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3770:1
position: 3770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2664-3770:1:exon

CA724_RS36845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36845
old locus tag: NIES22_73480
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYYKYLFNSLLYLILLFPQLKQNGNYKYNVTVNKEPNCLFLHGSRGQEAKKAGAITNQLVTYTEVKHINPNLWGDMRLYTNCRKIYYNLSDTLHKPWDDPVLTKTYYNFAIGCRQVDQKSKCTQWLSVSDRPNKIFTHSMGTLILASFCQFHPKECKVFQDTKIKKVSWYNIQGPLTGTPIADQVDTWCNKKNGINYLLAKYYETCEYLNGELRTTINNRSLKPSYKSYLASGMLADITYNYLSGGICGNSAWGSTLMAESEPFDQVIFGLKINYLWAAATLDSNGNSFQHIDLSKTENDGFIPTNSCLGKHRSKFNSSYQTPFYLAKSNHIEGTASTPNSLLCSLGISQSYCIRLWYRERTRSVNIQ
SIO_010081: CA724_RS36845
subclass of: SO_0000673
so part of: CA724_RS36845
location: 2664..3770
location: region:2664-3770:1
so has part: feature:2664-3770:1:exon

WP_096649170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2664-3770:1:exon

CA724_RS36850
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36850
old locus tag: NIES22_73490
so part of: sequence
location: 4533..5840
location: region:4533-5840:1
so has part: feature:4533-5840:1:exon
subclass of: SO_0000010

position:4533:1
position: 4533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5840:1
position: 5840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4533-5840:1:exon

CA724_RS36850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36850
old locus tag: NIES22_73490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015155937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NF041680 family putative transposase
translation: MKRARLEEFRQAAYTHLGKAHDATFELTDAILLTRNVYSLADLSLSPVFRRKWPSIYEAIQDTKPDREKLMELYIKQIPTEKRILLAGDHTAWSRPDAVTLKERTIEHSSTAIAGNKPITIGQGYSTIAWIPEDSGSWALPLRHERITSWDNPIEKAVEQLKKVCESMSVRPISLWDSEYGCAPFVLKTASIKADILVRLRSNLCLWGAPPAYSGKGRPRKHGAQFKLNEPSTWGEVASVLEVNDPKLGRVKVSLWEDLHFRKAAARPMMLLKVERLDLDGNLRVLRPLWLAWVGEQMPPLDEVWRLYLRRFTIDHWYRFLKQRLHWTVPKFSTPEQCEHWSDLMPLITWELWLACDIVADNPLPWQKSMDKLTPGRVAQAMGGVFAAIGTPTSPPKPRGKSLGWTPGKVRNRKIRYPIVKKTASKPRKEEQKSA
SIO_010081: CA724_RS36850
subclass of: SO_0000673
so part of: CA724_RS36850
location: 4533..5840
location: region:4533-5840:1
so has part: feature:4533-5840:1:exon

WP_096642647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4533-5840:1:exon

CA724_RS36855
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36855
old locus tag: NIES22_73510
so part of: sequence
location: complement(6477..6878)
location: region:6477-6878:-1
so has part: feature:6477-6878:-1:exon
subclass of: SO_0000010

position:6477:-1
position: 6477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6878:-1
position: 6878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6477-6878:-1:exon

CA724_RS36855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36855
old locus tag: NIES22_73510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015215841.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fasciclin domain-containing protein
translation: MADIIDTAVNAGSFNTLVAAIKAANLVDTLKGAGPFTVFAPTDEAFAKLPEGTVDALLKDIPKLKKILTYHVVSGKVLSADVVKLKSATTVEGTNVKIDASNGVKVNDATVATPDVAADNGVIHIIDTVLIPA
SIO_010081: CA724_RS36855
subclass of: SO_0000673
so part of: CA724_RS36855
location: complement(6477..6878)
location: region:6477-6878:-1
so has part: feature:6477-6878:-1:exon

WP_096649173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6477-6878:-1:exon

CA724_RS36860
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36860
old locus tag: NIES22_73530
so part of: sequence
location: 8034..8276
location: region:8034-8276:1
so has part: feature:8034-8276:1:exon
subclass of: SO_0000010

position:8034:1
position: 8034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8276:1
position: 8276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8034-8276:1:exon

CA724_RS36860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36860
old locus tag: NIES22_73530
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKYILFACFPYTSNLSNGITISHNTEEDEYVGIINTKTYEALKKYNINNNAELLQLLKNEGFKAIKFLEKDGYIGIEQM
SIO_010081: CA724_RS36860
subclass of: SO_0000673
so part of: CA724_RS36860
location: 8034..8276
location: region:8034-8276:1
so has part: feature:8034-8276:1:exon

WP_096649177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8034-8276:1:exon

CA724_RS36865
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36865
old locus tag: NIES22_73550
so part of: sequence
location: 9115..9792
location: region:9115-9792:1
so has part: feature:9115-9792:1:exon
subclass of: SO_0000010

position:9115:1
position: 9115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9792:1
position: 9792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9115-9792:1:exon

CA724_RS36865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36865
old locus tag: NIES22_73550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008191111.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MKLVGYVRVSSESQAENTSLTEQRQKIEAYCYAFNHELLQIFEEVGSGKNTTHRPQFQSALKLVSEQADGIIAAKLDRLARNTRDVLALVDDVLQPQRKALILLDLQVDTTTPQGYMILTVMSAVAKLERDIINERTQGGRRAKADNGGYAYGAPAFGQKAVDGELIPDLEELDAIEAIRKHHKSGKSFGAISKWMNMNGYKTKYGSQWQANSVKRVVDRLYHKT
SIO_010081: CA724_RS36865
subclass of: SO_0000673
so part of: CA724_RS36865
location: 9115..9792
location: region:9115-9792:1
so has part: feature:9115-9792:1:exon

WP_096649180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9115-9792:1:exon

CA724_RS36870
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36870
old locus tag: NIES22_73560
so part of: sequence
location: complement(10812..12266)
location: region:10812-12266:-1
so has part: feature:10812-12266:-1:exon
subclass of: SO_0000010

position:10812:-1
position: 10812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12266:-1
position: 12266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10812-12266:-1:exon

CA724_RS36870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36870
old locus tag: NIES22_73560
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQGVLELALAGVCGVAAIIGLATSQTRQPYDLTQIQFCPKSTNGVQSQIRLDKRFCNQPRFVLSEEWQRYGLYGSIIPYKGDAIQWVRDLPTDNPHQLLSGAVTVIGLWGIVGCLLVRTQRLKRKDYELGELEKTGGYAIWQQHKHKREVKQHSTQLYTERLKDGLSGLDTEERKALGLTDSENEQAKARIQLEDFMKARAVNHSVMDKTIAENLRDRAKAEQERSKIEGKTKSEIANSDNHQLTDQRLRGDLIEALKNHEDGWLWKVIDNQKPVWVLGEAGSGKSTLAASIVMLREYLFDMPLYQIIDAHAGDNLRNAWKYLSPQLIAQTEEEIGQAFDDARERWLDRINNQPDKQPQQLLVDEFTNYSESDITKEPAKKFVKASLSDPRKAEERLVCIAHFFTNTAVGGSDGTAKGRARGTIQIDRKTADGKTPLKVAVINGLNNSDGDAEVDKKVTIPSWLTPESIHKHFNGQPIDFDEV
SIO_010081: CA724_RS36870
subclass of: SO_0000673
so part of: CA724_RS36870
location: complement(10812..12266)
location: region:10812-12266:-1
so has part: feature:10812-12266:-1:exon

WP_096649183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10812-12266:-1:exon

CA724_RS36875
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36875
old locus tag: NIES22_73570
so part of: sequence
location: complement(12270..12839)
location: region:12270-12839:-1
so has part: feature:12270-12839:-1:exon
subclass of: SO_0000010

position:12270:-1
position: 12270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12839:-1
position: 12839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12270-12839:-1:exon

CA724_RS36875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36875
old locus tag: NIES22_73570
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAYDIDESQEEVISEIAPDTPLPKDLIEHLESRKQHRQDIINTTEKLTRFFAGWSLNSTGFFIAKYLLITGGGVNFWLAISLSFSICSVGSLAGLTGLRVNYNSDGLEVDNMQNILKTAAGLVCAGVTTWLAVKDYQYFEHLTKETVTQINQDIQTIEKQNPQSDPWVSIAVALALFIGSIAIIFKGRE
SIO_010081: CA724_RS36875
subclass of: SO_0000673
so part of: CA724_RS36875
location: complement(12270..12839)
location: region:12270-12839:-1
so has part: feature:12270-12839:-1:exon

WP_096649187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12270-12839:-1:exon

CA724_RS36880
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36880
old locus tag: NIES22_73580
so part of: sequence
location: complement(12904..13545)
location: region:12904-13545:-1
so has part: feature:12904-13545:-1:exon
subclass of: SO_0000010

position:12904:-1
position: 12904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13545:-1
position: 13545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12904-13545:-1:exon

CA724_RS36880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36880
old locus tag: NIES22_73580
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLKNQVTSKSRHLERQLKTKFNASTNLVVRALTGDKSALKLIGQMGNDGAKISEFAPQVREQMLAAIKGTEDLNVVLGDIYKQAGVSGEKIERAVQSAILADTHLANILEEMKLDFSSSQDKEALRHQQATDHIRLKTWVDKHMMQVDGEYKMLQTELQTDIRQQTIDLQHDRELGKYYLEMGDNARDDFKPKKQYAGRSIVQKIKEALLGF
SIO_010081: CA724_RS36880
subclass of: SO_0000673
so part of: CA724_RS36880
location: complement(12904..13545)
location: region:12904-13545:-1
so has part: feature:12904-13545:-1:exon

WP_096649190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12904-13545:-1:exon

CA724_RS36885
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36885
old locus tag: NIES22_73600
so part of: sequence
location: complement(13806..14468)
location: region:13806-14468:-1
so has part: feature:13806-14468:-1:exon
subclass of: SO_0000010

position:13806:-1
position: 13806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14468:-1
position: 14468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13806-14468:-1:exon

CA724_RS36885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36885
old locus tag: NIES22_73600
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDKFTNNVRARLYKQGYQGFTKDDYTTAAQFVECDDLNNPTKDQLSQAVEYLKAKATSQLSVADEPIEETLPMQTEAAQPELESHQLAIAEPEINNITVTSEDKHSFITAQSSALGFELTEQETLSIAEDVDDTFSDYSQFLSNVTSAIKSYVDHKFDAIEQSFEANAQDLRQHVNSRASRLNQKVNNFSGDIKADMGGIRQNIKSTQLSILARLNAVQ
SIO_010081: CA724_RS36885
subclass of: SO_0000673
so part of: CA724_RS36885
location: complement(13806..14468)
location: region:13806-14468:-1
so has part: feature:13806-14468:-1:exon

WP_096649194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13806-14468:-1:exon

CA724_RS36890
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36890
old locus tag: NIES22_73610
so part of: sequence
location: complement(14481..14990)
location: region:14481-14990:-1
so has part: feature:14481-14990:-1:exon
subclass of: SO_0000010

position:14481:-1
position: 14481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14990:-1
position: 14990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14481-14990:-1:exon

CA724_RS36890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36890
old locus tag: NIES22_73610
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATKQYIAKYHQLKQVYSRELGKEIADITWYRVVATLKQHFNFNVMGSDAQKIVETFAGFKRRYGSFTGRGEGFSERWQAFKHFYETDTFYHGEEFLKLLAEHLKINLEDVPRSTPYYWFERAELSFSAENVYHSKDLALVAFVAAKWAINKRPQPMKSATIEVLTLAK
SIO_010081: CA724_RS36890
subclass of: SO_0000673
so part of: CA724_RS36890
location: complement(14481..14990)
location: region:14481-14990:-1
so has part: feature:14481-14990:-1:exon

WP_096649198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14481-14990:-1:exon

CA724_RS36895
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36895
old locus tag: NIES22_73620
so part of: sequence
location: complement(15317..15586)
location: region:15317-15586:-1
so has part: feature:15317-15586:-1:exon
subclass of: SO_0000010

position:15317:-1
position: 15317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15586:-1
position: 15586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15317-15586:-1:exon

CA724_RS36895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36895
old locus tag: NIES22_73620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017307467.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIDKNLVGCVTLLTMSKTYLIDETLYRYLTSSGSIKYTQYHFRPLPRQSKTADLKLNRDKVLRKVYEIPSLYNQHLATITTTAIQQSLF
SIO_010081: CA724_RS36895
subclass of: SO_0000673
so part of: CA724_RS36895
location: complement(15317..15586)
location: region:15317-15586:-1
so has part: feature:15317-15586:-1:exon

WP_096649200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15317-15586:-1:exon

CA724_RS36900
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36900
old locus tag: NIES22_73630
so part of: sequence
location: complement(15579..16091)
location: region:15579-16091:-1
so has part: feature:15579-16091:-1:exon
subclass of: SO_0000010

position:15579:-1
position: 15579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16091:-1
position: 16091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15579-16091:-1:exon

CA724_RS36900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36900
old locus tag: NIES22_73630
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTSNQIRRLQTTERWLREIRDSEGFKVLNYCPDATLGDAIQAVDELLQSHNYCNEKPASFTDNQLQKYLKPKPVMHMSRVKTLREKISSFLLDAAKEVAILSLLTTGFMVVGTIFCHGVDRIEQSRGEEYQPTWINNAKVFEGSAITSIAIFLGANLIGACAAGGKKDD
SIO_010081: CA724_RS36900
subclass of: SO_0000673
so part of: CA724_RS36900
location: complement(15579..16091)
location: region:15579-16091:-1
so has part: feature:15579-16091:-1:exon

WP_096649203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15579-16091:-1:exon

CA724_RS36905
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36905
old locus tag: NIES22_73640
so part of: sequence
location: 16405..16614
location: region:16405-16614:1
so has part: feature:16405-16614:1:exon
subclass of: SO_0000010

position:16405:1
position: 16405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16614:1
position: 16614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16405-16614:1:exon

CA724_RS36905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36905
old locus tag: NIES22_73640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019496354.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MPVRNTVRRFIEEKLKITRYQFMKETGLSKTTVYALCDNPEQIPNGIALNKICDCYKIQPCELLEWSED
SIO_010081: CA724_RS36905
subclass of: SO_0000673
so part of: CA724_RS36905
location: 16405..16614
location: region:16405-16614:1
so has part: feature:16405-16614:1:exon

WP_096649206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16405-16614:1:exon

CA724_RS36910
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36910
so part of: sequence
location: 17092..17271
location: region:17092-17271:1
so has part: feature:17092-17271:1:exon
subclass of: SO_0000010

position:17092:1
position: 17092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17271:1
position: 17271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17092-17271:1:exon

CA724_RS36910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36910
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFVYLLAILAHRAGHFMPFFGQIAKKASSATIYPDSKFEAEFRKHGVIFLSCKYPRDES
SIO_010081: CA724_RS36910
subclass of: SO_0000673
so part of: CA724_RS36910
location: 17092..17271
location: region:17092-17271:1
so has part: feature:17092-17271:1:exon

WP_096649209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17092-17271:1:exon

CA724_RS36915
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36915
old locus tag: NIES22_73660
so part of: sequence
location: 17826..21401
location: region:17826-21401:1
so has part: feature:17826-21401:1:exon
subclass of: SO_0000010

position:17826:1
position: 17826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21401:1
position: 21401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17826-21401:1:exon

CA724_RS36915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36915
old locus tag: NIES22_73660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015201137.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3854 domain-containing protein
translation: MAQANKNGINEANGNDQLTLSHWQEWVIASGVNPTLAALNVRSLAGSEVYEYLLYALPQTARRNDGRLRDKYLRQYAHAEAGGWWVSGLDPLNNWQPMDWGRFKPDYPRIDWEKGKSVKYESPPKTPNRVTYFNIPNCISNLVAQRYNIKRYHSPLALRLCDRLHPLLFWEWVQRHPQIPIILCEGEKKAACLLSLGFVAIALPGIWNGRVGKKDFDERLHPDLLPMAQPGRKFIILFDYETKLRTRWSVFQAIVRTSKAIEAVGCSSEVALLPGPEKGVDDFVIERGKNANALLTAIIDDAKTLNDYQHSYHQSCRGLSNKYKPQQRVNVKYLSEAVKLPESGLVALCSDMGTGKTEMMRQWREQHPQQRFLNNSHRVNLLKNLGQRLNTQMYSELGYVGLTQATALSITIDSLHKLNTDSLKYGCIFIDEACQYLTHLLHSKTCKEHRAEILEVLQYIVYNTPLVVIADAHLDDVTVDFFRAMRPEGEEPFIIKNDWKNGGRTVYWYEGNNASALVAQISAALMSGQKIMVVSDSKRFIKKLEYSLINRGIECRVESKEEAGGQRSKGAEEQRSKATKQQKSKGVLEILASCQEREELMDNSSFPPAPLPPCPPASPNPHTQHPRLLKIWSIHSDNSGSEENVAFIKDITNAVKSLDALFTSPSLGTGVDIAEYHFDAVFGAFHAVSQTATECAQQLYRYRPIVPIHVWVAPRPPFGYLDTNASKIKQRLLQTNEMTAFLLRIDRETGKRGAEKDWALEAYCQIQAHRHQSINNLRADLRELLTDMGNTIVPMGTDDNDDAIERLKNAATALDVAYYCAVARANDISASDYRNRQSKDYLRPEEVFECEKFRIRDAYGMEVTELLVEKDDGGSLIRAIASLEAILSEPTGTIVDPNTGRQYPVPPAIVTDKDFAERNKLPLCMDWGNYSARWLARFNLGLHGILKRLVAGDEITATDPDLLKTTEIAKHCAAPVKAILGFTVPPNCQPIWLLATLVEQLGLKLVSHKVGPRGQQVKYYYLSPEELDFTLTVIAHRQHRRTQKQQQSHSVRWGEQLQGAEMPAMYRVSPLSPPVSTPPHNGIGKPHWSGVDTTDSVQGVNPFPDTDFEQFQPTDDDPTPIKTCAERLRLGILQGVEAIKSILKRWSEQRRWCAVLLLEQIASSELRQLEQLVPQLYQWLSELILPMEVTS
SIO_010081: CA724_RS36915
subclass of: SO_0000673
so part of: CA724_RS36915
location: 17826..21401
location: region:17826-21401:1
so has part: feature:17826-21401:1:exon

WP_096649212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17826-21401:1:exon

CA724_RS36920
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36920
old locus tag: NIES22_73670
so part of: sequence
location: complement(21621..22901)
location: region:21621-22901:-1
so has part: feature:21621-22901:-1:exon
subclass of: SO_0000010

position:21621:-1
position: 21621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22901:-1
position: 22901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21621-22901:-1:exon

CA724_RS36920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36920
old locus tag: NIES22_73670
inference: COORDINATES: protein motif:HMM:PF00400.30
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WD40 repeat domain-containing protein
translation: MCFINSALLGHLLLSSLNSNYGVWTVAIIPNSRIVVSGSNDNSIKLWDVQTGECLRTLEGHSHWVLAVAIDSQNMTLVSVSKDQTVKFWDIRSGDCLKTLQGFANGINSLAAIPGSTTITSAREDGTVTLWNFSTGERLKTLPAHTEWVNSLTASSDGKVIASCGGDGYVKLWDVNTSKCLRTFQMDRRAFAVSISPDCTILASGGNAKKINLWNLNTGELLRTLQDNVGLADLIICPNNTTLISSGDDALIKVWNISSGKCLNTFEGHSGSVTSLSLNPDNKSLASGSNDHTVRLWDVSTGECLSILQGHTSHVNSVAFSADGKLLASGSGDETIRLWDINSKECIRILQGHTNRVQSVTFLSDSKILVSGSYDGTIKFWDASTGECLKTLIDRPYEGMNISNIQGLKEAVKASLKALGAVEDRE
SIO_010081: CA724_RS36920
subclass of: SO_0000673
so part of: CA724_RS36920
location: complement(21621..22901)
location: region:21621-22901:-1
so has part: feature:21621-22901:-1:exon

WP_096649215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21621-22901:-1:exon

CA724_RS36925
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36925
old locus tag: NIES22_73680
so part of: sequence
location: complement(22927..24234)
location: region:22927-24234:-1
so has part: feature:22927-24234:-1:exon
subclass of: SO_0000010

position:22927:-1
position: 22927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24234:-1
position: 24234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22927-24234:-1:exon

CA724_RS36925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36925
old locus tag: NIES22_73680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015155937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NF041680 family putative transposase
translation: MKRARLEEFRQAAYTHLGKAHDATFELTDAILLTRNVYSLADLSLSPVFRRKWPSIYEAIQDTKPDREKLMELYIKQIPTEKRILLAGDHTAWSRPDAVTLKERTIEHSSTAIAGNKPITIGQGYSTIAWIPEDSGSWALPLRHERITSWDNPIEKAVEQLKKVCESMSVRPISLWDSEYGCAPFVLKTASIKADILVRLRSNLCLWGAPPAYSGKGRPRKHGAQFKLNEPSTWGEVASVLEVNDPKLGRVKVSLWEDLHFRKAAARPMMLLKVERLDLDGNLRVLRPLWLAWVGEQMPPLDEVWRLYLRRFTIDHWYRFLKQRLHWTVPKFSTPEQCEHWSDLMPLITWELWLACDIVADNPLPWQKSMDKLTPGRVAQAMGGVFAAIGTPTSPPKPRGKSLGWTPGKVRNRKIRYPIVKKTASKPRKEEQKSA
SIO_010081: CA724_RS36925
subclass of: SO_0000673
so part of: CA724_RS36925
location: complement(22927..24234)
location: region:22927-24234:-1
so has part: feature:22927-24234:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22927-24234:-1:exon

CA724_RS36930
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36930
old locus tag: NIES22_73690
so part of: sequence
location: 24485..25240
location: region:24485-25240:1
so has part: feature:24485-25240:1:exon
subclass of: SO_0000010

position:24485:1
position: 24485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25240:1
position: 25240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24485-25240:1:exon

CA724_RS36930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36930
old locus tag: NIES22_73690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017711062.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MTKVIAVFNQSGGVSKSTLTMNLGYHLAQKKQKVLLVDMDPQASLTAFMGLEPSELDKTVYEALLGDEPLPIHQNIHSMDLAPANINLSGAELELVVADMRDMRLKEALEPVLTQYGFIFIDCPPSLGILSYISLVAATHVLIPIQTEYKALKGTELLLTTIARVRSRANRKLQIAGVVPTMYDNRTGQGSQSLQSITNSLSKIGTIYPPIPRSVGFADAAQEHLPLALYNSKHPSVSILKQIAQSLSVLP
SIO_010081: CA724_RS36930
subclass of: SO_0000673
so part of: CA724_RS36930
location: 24485..25240
location: region:24485-25240:1
so has part: feature:24485-25240:1:exon

WP_096649218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24485-25240:1:exon