Calothrix brevissima NIES-22 plasmid plasmid6 DNA, complete genome.
type: Entry
definition: Calothrix brevissima NIES-22 plasmid plasmid6 DNA, complete genome.
sequence version: NZ_AP018213.1
sequence date: 2017-09-29
sequence: sequence
division: CON
label: NZ_AP018213.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00079796
keyword: RefSeq
source: Calothrix brevissima NIES-22 (Calothrix brevissima SAG 34.79)
organism: Calothrix brevissima NIES-22
taxonomy: Bacteria; Cyanobacteriota; Cyanophyceae; Nostocales; Calotrichaceae; Calothrix.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence was derived from\nAP018213.\nNBRP Genome Information Upgrading Program.: Genome sequencing of\ncyanobaciteial culture collection at National Institute for\nEnvironmental Studies (NIES).\n\nAnnotated using prokka 1.11 from http://www.vicbioinformatics.com.\nAnnotated at D-FAST https://dfast.nig.ac.jp\n\nAnnotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (released 2013). Information about the Pipeline can be\nfound here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: GS De Novo Assembler v. 2.9\nGenome Coverage :: 90x\nSequencing Technology :: Ilumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Date :: 09/28/2017 12:53:55\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS+\nAnnotation Software revision :: 4.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 7,410\nCDS (total) :: 7,298\nGenes (coding) :: 6,977\nCDS (coding) :: 6,977\nGenes (RNA) :: 112\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 93\nncRNAs :: 4\nPseudo Genes (total) :: 321\nPseudo Genes (ambiguous residues) :: 0 of 321\nPseudo Genes (frameshifted) :: 52 of 321\nPseudo Genes (incomplete) :: 259 of 321\nPseudo Genes (internal stop) :: 55 of 321\nPseudo Genes (multiple problems) :: 37 of 321\nCRISPR Arrays :: 10\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 35884
topology: circular
so has quality: SO_0000988
location: 1..35884
location: region:1-35884:1
RO_0002162: 1973478

NZ_AP018213
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00079796
type: BioSample
SIO_000068: biosample

1
title: Genome sequencing of cyanobaciteial culture collection at National Institute for Environmental Studies (NIES)
author: Hirose, Y.
author: Shimura, Y.
author: Fujisawa, T.
author: Nakamura, Y.
author: Kawachi, M.
journal: Unpublished

2
title: Direct Submission
author: Hirose, Y.
author: Shimura, Y.
author: Fujisawa, T.
journal: Submitted (23-JUN-2017) Contact:Yuu Hirose Toyohashi University of Technology, Department of Environmental and Life Sciences; Hibarigaoka-1-1 Tenpakucho, Toyohashi, Aichi 441-8122, Japan URL :http://mcc.nies.go.jp/ strainList.do?strainId=27&strainNumberEn=NIES-22

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35884:1
position: 35884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-35884:1:source
so part of: sequence
organism: Calothrix brevissima NIES-22
mol type: genomic DNA
strain: NIES-22
culture collection: NIES:22
plasmid: plasmid6

1973478
type: Taxonomy
SIO_000068: taxonomy

CA724_RS36650
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36650
old locus tag: NIES22_73100
so part of: sequence
location: 511..813
location: region:511-813:1
so has part: feature:511-813:1:exon
subclass of: SO_0000010

position:511:1
position: 511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813:1
position: 813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511-813:1:exon

CA724_RS36650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36650
old locus tag: NIES22_73100
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNPEIFSSDETSPEQFEVVQLEVVDELTDQKPELDTSRSSFWQNWIACINQHLQPGGKPVAVILSLGLISVPLILFSGSIWVGLILATSASIVAIRTCWM
SIO_010081: CA724_RS36650
subclass of: SO_0000673
so part of: CA724_RS36650
location: 511..813
location: region:511-813:1
so has part: feature:511-813:1:exon

WP_096649086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511-813:1:exon

CA724_RS36655
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36655
old locus tag: NIES22_73110
so part of: sequence
location: complement(1341..1853)
location: region:1341-1853:-1
so has part: feature:1341-1853:-1:exon
subclass of: SO_0000010

position:1341:-1
position: 1341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853:-1
position: 1853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341-1853:-1:exon

CA724_RS36655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36655
old locus tag: NIES22_73110
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFISRALLAKACILGLLVGWVTELPKNYFNSRQSKIQNLLAQTDSKHQTSPRVRANAENDLLREADISSNNEAISIYQQMLKVNPNSAKAHFLLAKLQLFGWYYQARNQPVGTALKQNGLKHLKTATYLYQKRGDTVAVAKLEKVYSQVEKGTNPVTWVFPEWRYVDVKL
SIO_010081: CA724_RS36655
subclass of: SO_0000673
so part of: CA724_RS36655
location: complement(1341..1853)
location: region:1341-1853:-1
so has part: feature:1341-1853:-1:exon

WP_096649088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1341-1853:-1:exon

CA724_RS36660
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36660
old locus tag: NIES22_73120
so part of: sequence
location: complement(1874..3457)
location: region:1874-3457:-1
so has part: feature:1874-3457:-1:exon
subclass of: SO_0000010

position:1874:-1
position: 1874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3457:-1
position: 3457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1874-3457:-1:exon

CA724_RS36660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36660
old locus tag: NIES22_73120
inference: COORDINATES: protein motif:HMM:PF10412.7
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system DNA-binding domain-containing protein
translation: MFHQNHQPDPSAMIGLGIAFFFGAIAYGTAKFTGPVFPMMLCGIYILSGSTSKELALKIGLAITLLELLLTPIIGWQNFWSYNLILGFVIAVIPERLVTGVVRGSQLQTPQQLQKQLRHKEQSLIKKQQILPQTLPRLEIAEIQLPDDLAPLSFMFLGSPGSGKTQAILKMLSIMRSRPDYRVICLDRSGEILEKFGDDNTLIFNPRDSRTIHWSHRSEDMEFETIAAGLIPPSPEGKDPFWNEAAKGLLSDLYAKTSTNAEVWQMIALKPIQELKNLLTGTLSATYLEAENTAAGIKSSAINYLRFYKVLADHQTTADFSWSRWGKEDDNRWIFLPIFENEAELFKPLYTMAFSLMLRGLLSNENHHIKTVICIDELSALGKLVGLERLLAEGRKFSGIGMLGTQLTGQIANIYGEYGMQTILQGCCTKLILNCRDYSTAELCSRLIGSQERLETTQGRSGNSWFSETRSVNQHIRETSAVLPSELQGLPPLEGYLLIADGTKPAKVKVTPTAYPLKASRFVDTAF
SIO_010081: CA724_RS36660
subclass of: SO_0000673
so part of: CA724_RS36660
location: complement(1874..3457)
location: region:1874-3457:-1
so has part: feature:1874-3457:-1:exon

WP_096649090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1874-3457:-1:exon

CA724_RS36665
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36665
old locus tag: NIES22_73130
so part of: sequence
location: complement(3546..4727)
location: region:3546-4727:-1
so has part: feature:3546-4727:-1:exon
subclass of: SO_0000010

position:3546:-1
position: 3546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4727:-1
position: 4727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3546-4727:-1:exon

CA724_RS36665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36665
old locus tag: NIES22_73130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016864099.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MIGNQTKGQGFRGLLDYLQSQEDAKLIGGNMGGNNAIALAREFKISRQLNPEADRVVYHASLSLPDNERLDDETWNEIANRYLEEMGFDSNQYVVYRHHNTQHDHIHICASRIRLDNGKIVRDSWDYKRSESIIRQLERDYGLQPTLGSHEKLSRKPSIGQQRRIEREQKEYLKGDRLSPQEPPIKQQLQELIDRATTDSPTMPQLIERLQIQGVKVRHGLTRNGKSKGISYSMKDQQFSGTSLGAAYTFPGLQKHKRVDYQPKRDDHRIISLLLNPAKPTQQLSQIQLNQHQEHPEVKPQEQPELNPWQQRYQQLSLALTATALSSDDRDKKIISHLLEQEEPAEDIKETIKHGSIPRTQAELEELLDLVIDELEEELEQQLEQPRRRGLSR
SIO_010081: CA724_RS36665
subclass of: SO_0000673
so part of: CA724_RS36665
location: complement(3546..4727)
location: region:3546-4727:-1
so has part: feature:3546-4727:-1:exon

WP_096649092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3546-4727:-1:exon

CA724_RS36670
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36670
old locus tag: NIES22_73140
so part of: sequence
location: complement(4708..5031)
location: region:4708-5031:-1
so has part: feature:4708-5031:-1:exon
subclass of: SO_0000010

position:4708:-1
position: 4708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5031:-1
position: 5031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4708-5031:-1:exon

CA724_RS36670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36670
old locus tag: NIES22_73140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017307421.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MIRSKAEDASMSLAELTRRCMLLRPIPPPPPRLGRVTLATYLELSRIGNNINQLAKATNTAIKMQLPPPTDPKLLNELLELLRHCQREIANTFIEETDEETDDWQPD
SIO_010081: CA724_RS36670
subclass of: SO_0000673
so part of: CA724_RS36670
location: complement(4708..5031)
location: region:4708-5031:-1
so has part: feature:4708-5031:-1:exon

WP_096649145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4708-5031:-1:exon

CA724_RS36675
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36675
so part of: sequence
location: 5105..5425
location: region:5105-5425:1
so has part: feature:5105-5425:1:exon
subclass of: SO_0000010

position:5105:1
position: 5105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5425:1
position: 5425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5105-5425:1:exon

CA724_RS36675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36675
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MISYRTLCNLLRGFPKGETSHFGKPAESSVAKTVRRTRHGLLLTRFSGRQESAGWPPMWGQCAYWAATANQTDAKIMRCYCQSNGRENYALIGMVSFYSENFWITV
SIO_010081: CA724_RS36675
subclass of: SO_0000673
so part of: CA724_RS36675
location: 5105..5425
location: region:5105-5425:1
so has part: feature:5105-5425:1:exon

WP_096649094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5105-5425:1:exon

CA724_RS36680
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36680
old locus tag: NIES22_73150
so part of: sequence
location: 5607..6146
location: region:5607-6146:1
so has part: feature:5607-6146:1:exon
subclass of: SO_0000010

position:5607:1
position: 5607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6146:1
position: 6146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5607-6146:1:exon

CA724_RS36680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36680
old locus tag: NIES22_73150
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKDSIPKSKIPEALNALRSLGAKELDEIPARAAIKKMRRQIERVLRLGYSYQEVSETLAGLDINISAERIRYLLNDIKKSTRKKSVTSEPTENTNTSVVNESDRGKNSVTEPSNSQSATKSQVKSQPQSKSKTASAKTKSTSAATSKTTKQPLDVKVSPNQNNSGLAFQPELIRDEDL
SIO_010081: CA724_RS36680
subclass of: SO_0000673
so part of: CA724_RS36680
location: 5607..6146
location: region:5607-6146:1
so has part: feature:5607-6146:1:exon

WP_096649096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5607-6146:1:exon

CA724_RS36685
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36685
old locus tag: NIES22_73160
so part of: sequence
location: 6225..6926
location: region:6225-6926:1
so has part: feature:6225-6926:1:exon
subclass of: SO_0000010

position:6225:1
position: 6225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6926:1
position: 6926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6225-6926:1:exon

CA724_RS36685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36685
old locus tag: NIES22_73160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016864096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVLVTGDKGGTGKSVVARILLDIYRHRNINCIAYECDKSNPQLYRHYNKLEPGVRTLKLNQRGGADALQDDLKCFSPQVSLVDLPAGAAEYFESVAKDIFLFQNAQRLGYRITMVSVLGRVKDSLLQLKRLMDFCGERVDYVVVKNLYWGDEHKFTRYNNSKVKQSVEALGAVELLLPELYDDIFDLIDSHDLTFREALEHEDFSLSNQSRIYGWIDAVETEFAKAGVELGLE
SIO_010081: CA724_RS36685
subclass of: SO_0000673
so part of: CA724_RS36685
location: 6225..6926
location: region:6225-6926:1
so has part: feature:6225-6926:1:exon

WP_096649148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6225-6926:1:exon

CA724_RS36690
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36690
so part of: sequence
location: 6926..7672
location: region:6926-7672:1
so has part: feature:6926-7672:1:exon
subclass of: SO_0000010

position:7672:1
position: 7672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6926-7672:1:exon

CA724_RS36690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36690
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASANGKGNGGVSHLDRLLSEKSPEFQAKVLRFALDSGMKQDDPAFRLVQYIGYLAQLTETAPNDWKLLFENLQVELNQWSQLTAEQLKTQADHTENIKVLATSCNQLATALSALNQTSLQQLELLKNLTNLSSYWSNTSPNHTEKLIAPLREELSQMKTMISSHQLSHSVAVDLAAKNWARNFIIRLFSPVTFFILFLIYSHLFPISVPYETTKSLDKILEQTGWTNTKLQRVEKNLGTDPNSRRRR
SIO_010081: CA724_RS36690
subclass of: SO_0000673
so part of: CA724_RS36690
location: 6926..7672
location: region:6926-7672:1
so has part: feature:6926-7672:1:exon

WP_096649098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6926-7672:1:exon

CA724_RS36695
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36695
old locus tag: NIES22_73180
so part of: sequence
location: 7784..8695
location: region:7784-8695:1
so has part: feature:7784-8695:1:exon
subclass of: SO_0000010

position:7784:1
position: 7784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8695:1
position: 8695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7784-8695:1:exon

CA724_RS36695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36695
old locus tag: NIES22_73180
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGINFFELLNPVLDKEITFISNQLTIPPEEVYKLLLEEAERNQLEWYSNRVPNLNYEIPACRLAYLYIVAAANASTFQYVLESNENLRSYILGIAEQYHELKICAFGAGPGTELLGLAKFFDKQKLGNSVSVDFQLLDKVQEWTSSWYCIRDQINEYFKSIYGVVRSNWPMITSGNFIACDVTELDRLSYLANVWQQDLYVINFLLSEIFNDDPGLRSFLSKVVELAPKGARFVFIERRGAMWEERMKNIATDSGLILSPFIESKGNLADEEPTKLGLIYSAISEIRKPRLTWNVVYSVGVKQ
SIO_010081: CA724_RS36695
subclass of: SO_0000673
so part of: CA724_RS36695
location: 7784..8695
location: region:7784-8695:1
so has part: feature:7784-8695:1:exon

WP_096649100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7784-8695:1:exon

CA724_RS36700
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36700
old locus tag: NIES22_73190
so part of: sequence
location: 8893..9531
location: region:8893-9531:1
so has part: feature:8893-9531:1:exon
subclass of: SO_0000010

position:8893:1
position: 8893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9531:1
position: 9531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8893-9531:1:exon

CA724_RS36700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36700
old locus tag: NIES22_73190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006509481.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha-ketoglutarate-dependent dioxygenase AlkB
translation: MNTQLSLNLWADTLTSNLQPEKLSIPDGDIIFYPSYFTEEESNRIIQELFREINWGQDKIKFYGKEMNLPRLTAWYGDSGKYYTYSNITMNPIPWTPMLLYIKNKIETVAEVVFNSVLLNFYRNGKDSISWHSDDEPELGKEPIIYSVSFGGERKFQLRHKYKNNLEKIELKLNHGSLLIMQGKTQEYWQHQIPKTSKLVMPRVNLTFRIIK
SIO_010081: CA724_RS36700
subclass of: SO_0000673
so part of: CA724_RS36700
location: 8893..9531
location: region:8893-9531:1
so has part: feature:8893-9531:1:exon

WP_096649102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8893-9531:1:exon

CA724_RS36705
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36705
old locus tag: NIES22_73200
so part of: sequence
location: complement(10068..12689)
location: region:10068-12689:-1
so has part: feature:10068-12689:-1:exon
subclass of: SO_0000010

position:10068:-1
position: 10068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12689:-1
position: 12689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10068-12689:-1:exon

CA724_RS36705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36705
old locus tag: NIES22_73200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016863977.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3854 domain-containing protein
translation: MDIKEATQRLGYTAQSAGIWLEGSNGFGQYRPNKPWKNTDEKKAPKYRTATKEEYDAMLPRHPHNPRYWVDLEALKALCYHINGHPCLLLTEGLFKAIAGCSHDLPTVALAGVEQGLTPAKNDPQGKRYLVDTLEFLARANFGWIIAFDADERAVTNKNVIAAQRKLAHQLAKFKVPVYIATGNWSTDEGKGMDDYIQANGDDAFREKVLAKAVSLEVWERQFRESEIDNKMLSESAFAAFIAENYRNRLAWHVANKAWYWYEAEQKQGVWGEIPHEEAQDIIVTELRSRRPDFGYRFVANTLNLLKGDLRINHWEVCPGFICLQDCVLDVNTLKTYPHAPGYRMLTQLPFKWADRSVGCDPIKQWLLEVCDGQLLWVEVIRAAINATITERGGKMQRYLELIGAGGTGKGTILRLVQELVGKENYAITTLKQLEQNRFETASFYGKKLICITDSERYTGDVSVFKAITGYDDLRHEKKGVQQTGSFKFHGVVMVAANEAMQSTDYTNATARRRLSMPFNHVIPPHQRRDLIAEFTPYLPGLLSWVLEMPFAQVQDLFVDTNSKVPSLAAFSKEILMETNPLANWADECLYYDPKAITGIGDISQNPEEFLYPNYAQWASNNGQGTMNKQRFSSTLLNLLKAQLGIDATKRKTNKGRFITCVGIRKPGNNFPLLISTSDDLIQKGDDLVKTELTTQVTTESIGSDGFFTSDDLFAHGITEESNECSSMLSPVEQNEGDGSSLEGNPTTESVLGRQEVVTVTTDEAQKVVTSPSVTQQMINNWDDRSSLGQLVLSLRVEELRQAVAGFNHDQLQHIKDAANSVWRLSVDSLAEYNGELVYVWECGQSNDIRIGTKTQPGVKVRRANLRPWLGIG
SIO_010081: CA724_RS36705
subclass of: SO_0000673
so part of: CA724_RS36705
location: complement(10068..12689)
location: region:10068-12689:-1
so has part: feature:10068-12689:-1:exon

WP_096649151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10068-12689:-1:exon

CA724_RS36710
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36710
so part of: sequence
location: complement(13109..13270)
location: region:13109-13270:-1
so has part: feature:13109-13270:-1:exon
subclass of: SO_0000010

position:13109:-1
position: 13109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13270:-1
position: 13270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13109-13270:-1:exon

CA724_RS36710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016864021.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATSKAKVTFTCSPELKEKLQEWADSENRTLSNLVELIAQQAVTDHEKKASKK
SIO_010081: CA724_RS36710
subclass of: SO_0000673
so part of: CA724_RS36710
location: complement(13109..13270)
location: region:13109-13270:-1
so has part: feature:13109-13270:-1:exon

WP_096649104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13109-13270:-1:exon

CA724_RS36715
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36715
old locus tag: NIES22_73210
so part of: sequence
location: 13671..14183
location: region:13671-14183:1
so has part: feature:13671-14183:1:exon
subclass of: SO_0000010

position:13671:1
position: 13671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14183:1
position: 14183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13671-14183:1:exon

CA724_RS36715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36715
old locus tag: NIES22_73210
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTSNQIRRLQTTDRWLREIRDSEGFKVLNYFPDATLGDAIQAVDELLQSHNYCNEKSASFTDNQLQKYLEQKPVMNIRRVVTLREKMSSFIQNAASEVAVLSLLTTGFMVVGTIFCHGVDRIEQSRGSEYQPTWINNALIFEGSAIASIAVFLGANLIGACAAGGKKDA
SIO_010081: CA724_RS36715
subclass of: SO_0000673
so part of: CA724_RS36715
location: 13671..14183
location: region:13671-14183:1
so has part: feature:13671-14183:1:exon

WP_096649106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13671-14183:1:exon

CA724_RS36720
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36720
old locus tag: NIES22_73220
so part of: sequence
location: 14176..14451
location: region:14176-14451:1
so has part: feature:14176-14451:1:exon
subclass of: SO_0000010

position:14176:1
position: 14176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14451:1
position: 14451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14176-14451:1:exon

CA724_RS36720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36720
old locus tag: NIES22_73220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012413122.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHDLIHVYEPSSLSQSKVYQIKGALYRFTGQCPWARIDHPQWCFTPLAGQRRKADIKLNQNKVRHEIYEVPGMVANRKSEVMGQGIQQTLF
SIO_010081: CA724_RS36720
subclass of: SO_0000673
so part of: CA724_RS36720
location: 14176..14451
location: region:14176-14451:1
so has part: feature:14176-14451:1:exon

WP_096649108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14176-14451:1:exon

CA724_RS36725
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36725
old locus tag: NIES22_73230
so part of: sequence
location: 14776..15285
location: region:14776-15285:1
so has part: feature:14776-15285:1:exon
subclass of: SO_0000010

position:14776:1
position: 14776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15285:1
position: 15285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14776-15285:1:exon

CA724_RS36725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36725
old locus tag: NIES22_73230
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATKEYIAKYRQLKLLYERELDKQIADITWYRVVATLKQHFSFEVQAKDAQKIVRAFAGLKRRYGSFTGRGEGFNERWQAFRYFYELDTHYDGRQFLEILADYLKINLDDVPRSTRYYWFERAGLSLSAMEGHHSKDLALVAFVAAKWAINKRSQPMKSATIEVLTLAK
SIO_010081: CA724_RS36725
subclass of: SO_0000673
so part of: CA724_RS36725
location: 14776..15285
location: region:14776-15285:1
so has part: feature:14776-15285:1:exon

WP_096649110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14776-15285:1:exon

CA724_RS36730
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36730
old locus tag: NIES22_73240
so part of: sequence
location: 15298..15954
location: region:15298-15954:1
so has part: feature:15298-15954:1:exon
subclass of: SO_0000010

position:15298:1
position: 15298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15954:1
position: 15954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15298-15954:1:exon

CA724_RS36730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36730
old locus tag: NIES22_73240
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDKFTNNVRARLYKQGYQGFTKEDYTSAAIVVECEDLNNPSKDQLSQAVEYLKTKATSQLSVADEPVEETLPIQALAAQPESNQLAVAEPEINGITVTSEDKHQIITAQSSALGFELTEQETLSIATEVDDTFTDYSQFLSNVTSAIKSYVDHKFDAIEQSFEANAQDLRQHVNSRASRLNQKVNNFSGDIKADMGGIRQNIKSTQFSILTRLNAVQ
SIO_010081: CA724_RS36730
subclass of: SO_0000673
so part of: CA724_RS36730
location: 15298..15954
location: region:15298-15954:1
so has part: feature:15298-15954:1:exon

WP_096649113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15298-15954:1:exon

CA724_RS36735
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36735
old locus tag: NIES22_73260
so part of: sequence
location: 16215..16856
location: region:16215-16856:1
so has part: feature:16215-16856:1:exon
subclass of: SO_0000010

position:16215:1
position: 16215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16856:1
position: 16856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16215-16856:1:exon

CA724_RS36735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36735
old locus tag: NIES22_73260
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLKNQVTSKSRHLEHQLKTKFNASTNLVVRALTGDKSALKLIGQMGNDGAKISEFAPQVREQMLAAIKGTEDLNVVLSDIYKQAGVSGEKIERAVQSAILADTHLANILEEMKLDFASSQDKEALRHQQATDHIRLKTWVDKHMMQVDGEYKMLQTELQTDIRQQTIDLQHDRELGKYYLEMGDNARDDFKPKKQYAGLSIVQKIKEALLGF
SIO_010081: CA724_RS36735
subclass of: SO_0000673
so part of: CA724_RS36735
location: 16215..16856
location: region:16215-16856:1
so has part: feature:16215-16856:1:exon

WP_096649115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16215-16856:1:exon

CA724_RS36740
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36740
old locus tag: NIES22_73270
so part of: sequence
location: 17063..17632
location: region:17063-17632:1
so has part: feature:17063-17632:1:exon
subclass of: SO_0000010

position:17063:1
position: 17063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17632:1
position: 17632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17063-17632:1:exon

CA724_RS36740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36740
old locus tag: NIES22_73270
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTYEIDDEQEELVNEIAPDTPLPKDLIEHLDSRKQHRQDIIKTTEKLTRFFVGWSLNSTGFFIAKYLLITGGGVNFWLAISLSFSICSVGSLAGLTGLRVNYNSDGLEVDNMQNFLKTAAGLVCAGVTTWLAVKDYQYFEHLTSETVSQINQDIQTIEKQNPQSDPWVSIAVALALFIGSIAIIFKGRE
SIO_010081: CA724_RS36740
subclass of: SO_0000673
so part of: CA724_RS36740
location: 17063..17632
location: region:17063-17632:1
so has part: feature:17063-17632:1:exon

WP_096649117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17063-17632:1:exon

CA724_RS36745
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36745
old locus tag: NIES22_73280
so part of: sequence
location: 17637..19088
location: region:17637-19088:1
so has part: feature:17637-19088:1:exon
subclass of: SO_0000010

position:17637:1
position: 17637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19088:1
position: 19088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17637-19088:1:exon

CA724_RS36745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36745
old locus tag: NIES22_73280
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQGVLELALAGVCGVAAIIGLATSQTRQPYDLTQIQFCPKSTNDVKSQIALDKRFCNQPRFVLAEEWQRYGLYGSMIPYKGDAIQWVRDLPTDNPHQLLGGAVTVTGLWGIVGCLLVRTQRLKRKDYELGELEKTGGYAIWQQNKHKREVKQHSIQLYTERLKDGLSGLDTEERKALGLTDEENERAKARIQLEDFLKARAVNHSVMDKTIAENLRDRAKAEQERSKIEGKTKGAIANGDNHQLTDQRLISDLIEALKNHEDGWLWKVIDNQKPVWVLGEAGSGKSTLAASIVMLREYLFDMPLYQLIDAHAGDNLRNAWKYLSPQLIAKTEEEIGQAFDDARERWLDRINNQPDKEPQQLLVDEFTNYSESDITKEPAKKFVKASLSDPRKAEERLVCIAHFFTNTALGGSDGTAKGRARGTIQIDRKTADGKTPLKVATINGLNNSDGDAEVDKKVTIPGWLTPENIHKHFNGQPIDFDD
SIO_010081: CA724_RS36745
subclass of: SO_0000673
so part of: CA724_RS36745
location: 17637..19088
location: region:17637-19088:1
so has part: feature:17637-19088:1:exon

WP_096649119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17637-19088:1:exon

CA724_RS36750
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36750
old locus tag: NIES22_73290
so part of: sequence
location: 19485..21092
location: region:19485-21092:1
so has part: feature:19485-21092:1:exon
subclass of: SO_0000010

position:19485:1
position: 19485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21092:1
position: 21092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19485-21092:1:exon

CA724_RS36750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36750
old locus tag: NIES22_73290
inference: COORDINATES: protein motif:HMM:PF00400.30
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WD40 repeat domain-containing protein
translation: MDWINLQQQLQDDFTKRLSLNSNLLNSLSDINNELKIYPNEFRIVYGEDLKNIIKYCWEITDKFKKTSQKSVYENFVNNLQGKLGELVVKQYLGNLVTAIDLQIKLGGDGKVDFRLTSEPSLGIQVKVRSGEFNFVKWSVDVEEINNNSVIICLLIPEKITILQQKYCLIFAGFIPVSLINGSGTKVSLGINDLLYIGGLKKYLSSLQSNNCTLKKIEFTPAYQAKSTTLTSWKCIYTLTGHTSGIKYISISPDGYILASASIGLDNKVTNIWHLETRKKLYTFTANTKVEFLAFTNQGQTLVSSGSEDETIRLCNTGTLLELRALKYYDKWFRYLAISSDGDTIASSGGWNKLGGESSIKLLQLSTKQELHILRGHRDYVRSIAFSPDGQILASGSDDTTIKIWQVSTGKKILTLTGHNDWVFSVAFSPDGELLASSSDDTTIKIWQVSTGKEVQTLTSHTSYVHAVAFSPDGQLLASGSEDKTIKIWQVSKGQELFTLTGHTESVNCIAFAPDGQTLVSGSDDKTIKIWRVNN
SIO_010081: CA724_RS36750
subclass of: SO_0000673
so part of: CA724_RS36750
location: 19485..21092
location: region:19485-21092:1
so has part: feature:19485-21092:1:exon

WP_096649121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19485-21092:1:exon

CA724_RS36755
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36755
old locus tag: NIES22_73300
so part of: sequence
location: 21179..21385
location: region:21179-21385:1
so has part: feature:21179-21385:1:exon
subclass of: SO_0000010

position:21179:1
position: 21179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21385:1
position: 21385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21179-21385:1:exon

CA724_RS36755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36755
old locus tag: NIES22_73300
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTASKNSLPIALWIAEGKDRGATHLLVVYNGQTSNYEAVYVMPGENLQRKESEYSTGWFSVLTNYEIY
SIO_010081: CA724_RS36755
subclass of: SO_0000673
so part of: CA724_RS36755
location: 21179..21385
location: region:21179-21385:1
so has part: feature:21179-21385:1:exon

WP_096649123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21179-21385:1:exon

CA724_RS36760
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36760
old locus tag: NIES22_73310
so part of: sequence
location: 21569..23317
location: region:21569-23317:1
so has part: feature:21569-23317:1:exon
subclass of: SO_0000010

position:21569:1
position: 21569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23317:1
position: 23317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21569-23317:1:exon

CA724_RS36760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36760
old locus tag: NIES22_73310
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTESTNTPRSGYSREEAESFIKKFLSNNNYKVLAVKGKWGVGKTYLVHNFLSDNKKDYYYYASVFGISSIEQLKGRIVANFNQFNSNFVNKFLNNTVEWISRNASKLERTPKMDLGLPGQSSIPLVGSLISAAGDLALNILFNENARNSIICIDDLERKSTLPLNELLGFIEYLVQELNCKIILIYNEDILLEDEISKKILQYYREKVIDREFLLEPTVEENLNLIFNESPDIEVIKSVFLKAGTNNIRVIRKTKWLIDELIPLIENWQPSLRNQVINNSIVINLAKIDTNFRKNFSITIDRLLYLINSSKYKNNGTSEEIIQLVQQVSYLGYTPLEIDELIIKSLETSLSSSDELEFLQKGEILNQRENKNQVIKKLHNLGKPYYNSFGNDQKVIIEGIISFLEEYHLDLSISEFEQIEKIALLVELDISNYEKSFLEYKLKTLEPHYFNDLNALKVKLHKYPDLEAYLEEQRNQYRQNLDITTALRKLLNNESQLISPWLEAEIDFLDNCTVDEYSKWLEEGHPDLYLMVKQFLKLGLLASQKLEQAIRNLAKKSKLNKIRAKFLYNIDIENTSNTNDLN
SIO_010081: CA724_RS36760
subclass of: SO_0000673
so part of: CA724_RS36760
location: 21569..23317
location: region:21569-23317:1
so has part: feature:21569-23317:1:exon

WP_096649125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21569-23317:1:exon

CA724_RS36765
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36765
pseudo: true
so part of: sequence
location: complement(23352..>23471)
location: region:23352-23471:-1
so has part: feature:23352-23471:-1:exon
subclass of: SO_0000010

position:23352:-1
position: 23352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23471:-1
position: 23471
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23352-23471:-1:exon

CA724_RS36765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010994166.1
note: incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase
SIO_010081: CA724_RS36765
subclass of: SO_0000673
so part of: CA724_RS36765
location: complement(23352..>23471)
location: region:23352-23471:-1
so has part: feature:23352-23471:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23352-23471:-1:exon

CA724_RS36770
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36770
old locus tag: NIES22_73320
so part of: sequence
location: complement(23494..24099)
location: region:23494-24099:-1
so has part: feature:23494-24099:-1:exon
subclass of: SO_0000010

position:23494:-1
position: 23494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24099:-1
position: 24099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23494-24099:-1:exon

CA724_RS36770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36770
old locus tag: NIES22_73320
inference: COORDINATES: protein motif:HMM:PF02893.18
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GRAM domain-containing protein
translation: MNIDHQDLLNDETLLLSKAANAVIKINTHELKHLPYDQLMSLVDFKNKEAIGGMLYLTNYRLLFKSHTFNRVTGKFSIFLPTVQSVRDTSQLLTKKIEVATQTQTLEFVVWGIPSLIQAIKSAADALTEQQKANIKKCMMTDYAKIGDGLNSSKIMNKIALNMIDVINPLIEIIQDPINLSSVLNLLELWEILGKEEDKYH
SIO_010081: CA724_RS36770
subclass of: SO_0000673
so part of: CA724_RS36770
location: complement(23494..24099)
location: region:23494-24099:-1
so has part: feature:23494-24099:-1:exon

WP_096649127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23494-24099:-1:exon

CA724_RS36775
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36775
old locus tag: NIES22_73330
so part of: sequence
location: complement(25042..27531)
location: region:25042-27531:-1
so has part: feature:25042-27531:-1:exon
subclass of: SO_0000010

position:25042:-1
position: 25042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27531:-1
position: 27531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25042-27531:-1:exon

CA724_RS36775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36775
old locus tag: NIES22_73330
inference: COORDINATES: protein motif:HMM:PF05729.10
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NACHT domain-containing NTPase
translation: MPRDTLRATKLGKYLVEEEANKKGWGRQSQAWADAAYTTVPTLKRFWEGKPITASTFIAICKAVKVDWEQVCDNSTSTDNASAQPELSVKTLSIDNLVETVREKLQDRIIQRCGMMRVLDMTQPIDLEDIYINVNVLEKITRRRRLKRDELLESTSFENFERFTLGKVSKEQVPGMEAVEKYSKLMILGKPGAGKTTFLKFLALQCIEGRFRAQHIPLFITLKDFAELPNQPSLLDYLNQLINYPNKADVEQLLNEGRLLILLDGLDEVKKEDSNLILNIIKEFTIQYHKNYYVITCRIAAQEYTFENFTEAEIADFNWEQITNFINKWFGIKNNLIKSQEIIRELQKNKPIQDIATNPLFLTLLCLVFEEFGKFPSNRSKLYEEGLDILFKKWDIKRNIKRSQVYKDLSLRRQKDLLSQFALETFERGDYFFKQEYIETYIIQYMSNLMAHSNLQEELDLDSEGIIKLIESQHGLLIERAKGIYSFSHLTFHEYFAAKEISNPSKPDRKQAEMLQYLVTKINEKRWREIFLLTVGMLESADYFLQLMKSQIDMLFASDEALQQFRSWVRKKSNSVKASYKPAAIRAFYLDLARALDLARTFDLAEVINRVNVSALHLQRTLELVHRTHTPSFDPMFSFDLALHGSLARSIDKNTAIDPDDDNIRILDLALDSNISSDLVLDRALFLALGVAHACTCAITIELNIINILINALNLACEYALDPNYPNLQICLKRLKEELPINCQENCEDYGNWWKSNGQTWTKQLRYVMTEYRDIGHDLQFSNHQLSLLQQYYDANLLLVNCLNSECSVSSQVKQELEDTLLLPITLRS
SIO_010081: CA724_RS36775
subclass of: SO_0000673
so part of: CA724_RS36775
location: complement(25042..27531)
location: region:25042-27531:-1
so has part: feature:25042-27531:-1:exon

WP_096649128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25042-27531:-1:exon

CA724_RS36780
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36780
old locus tag: NIES22_73350
so part of: sequence
location: 28289..29500
location: region:28289-29500:1
so has part: feature:28289-29500:1:exon
subclass of: SO_0000010

position:28289:1
position: 28289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29500:1
position: 29500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28289-29500:1:exon

CA724_RS36780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36780
old locus tag: NIES22_73350
inference: COORDINATES: protein motif:HMM:PF04055.19
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM protein
translation: MTTMKLVEQNIQPDYLGVPFNTFVVKVVSTCNLNCSYCYMYNLQDQTYKQQPAVISQEVTKALTDKIISHYRRHQMSLIHITLHGGEPLLMGKERLQTWVRQVGERLHQEGIPHEFAIQSNGTLLDSEWIDLLAEAKVGIGISIDGPQQFHDMFRVDHKGNGSFNKVLANIRLLQEHPKGKEIFLGLLSVLNIDIPPTEFFEFWEFLNVRALDILLPDANHAYPPRQGRISYGDWMIQFFDLWLNQNREDRIVRFFNSILRLIFGYPFSVEYIGGKPVGVCVIETNGDIEPLDVLKSCKDGITKMGLNVLNNEFDDLYSFPLTKIYQQGARLLCDTCKNCEVLDVCGGGYLPHRYSHENDFNNPSVYCDDLYRLILHIRRRVGEFLPKDMQASLSGSAICSKL
SIO_010081: CA724_RS36780
subclass of: SO_0000673
so part of: CA724_RS36780
location: 28289..29500
location: region:28289-29500:1
so has part: feature:28289-29500:1:exon

WP_096649130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28289-29500:1:exon

CA724_RS36785
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36785
pseudo: true
so part of: sequence
location: <29604..29870
location: region:29604-29870:1
so has part: feature:29604-29870:1:exon
subclass of: SO_0000010

position:29604:1
position: 29604
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:29870:1
position: 29870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29604-29870:1:exon

CA724_RS36785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011614103.1
note: incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: CA724_RS36785
subclass of: SO_0000673
so part of: CA724_RS36785
location: <29604..29870
location: region:29604-29870:1
so has part: feature:29604-29870:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29604-29870:1:exon

CA724_RS36790
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36790
old locus tag: NIES22_73370
so part of: sequence
location: 30032..31024
location: region:30032-31024:1
so has part: feature:30032-31024:1:exon
subclass of: SO_0000010

position:30032:1
position: 30032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31024:1
position: 31024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30032-31024:1:exon

CA724_RS36790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36790
old locus tag: NIES22_73370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012413358.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MNPIHPENLTVLENSLSLVIGEDFSLENDPDVIQQLIGDKRSENTKREYQKDLKDFFLFVAKKEPSRDLVLEFLHLEQRHAVAVVLKYKAHLIKKKLAEATVNRRLSAIKSMVEMGRRLGVCNFSLDDVKGERVETYRDTTGIPATDYAKVIALVDQNTLKGKRDYAILRLLWDNGLRRNEIVNLNVRDFNAKEKTLSILGKGKGSQKEVLDLSNKTASSLASWIKASKKKRGDDPLFTVLAYHKNGARLTGEAIRRLVDGLCKQAGITKKMSPHRVRHSAITTVLDLNNGNYRATQRFSRHAQVQTVLKYDDNRQRLQKQMSDSISELI
SIO_010081: CA724_RS36790
subclass of: SO_0000673
so part of: CA724_RS36790
location: 30032..31024
location: region:30032-31024:1
so has part: feature:30032-31024:1:exon

WP_096649132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30032-31024:1:exon

CA724_RS36795
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36795
old locus tag: NIES22_73380
so part of: sequence
location: complement(31155..31370)
location: region:31155-31370:-1
so has part: feature:31155-31370:-1:exon
subclass of: SO_0000010

position:31155:-1
position: 31155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31370:-1
position: 31370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31155-31370:-1:exon

CA724_RS36795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36795
old locus tag: NIES22_73380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006198101.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKSLSEKIQEQPIESQVQIENRAKELIAEELTRQKLRLQKQQLKLRARKRKALKPRGVVIFGEINDKTLI
SIO_010081: CA724_RS36795
subclass of: SO_0000673
so part of: CA724_RS36795
location: complement(31155..31370)
location: region:31155-31370:-1
so has part: feature:31155-31370:-1:exon

WP_096649134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31155-31370:-1:exon

CA724_RS36800
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36800
old locus tag: NIES22_73390
so part of: sequence
location: complement(31351..31734)
location: region:31351-31734:-1
so has part: feature:31351-31734:-1:exon
subclass of: SO_0000010

position:31351:-1
position: 31351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31734:-1
position: 31734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31351-31734:-1:exon

CA724_RS36800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36800
old locus tag: NIES22_73390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019488203.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MEWKVKFYDAFELEFDALPQEVKNELLATAKLLEQFGPQLKRPHVDTLNGSKYSNMKELRFLASDGVWRVAFAFDPVRRAILLVAGDKSGVSEKLFYKQLIKKADKRYKEHLRRLKEEEEIHGEKPE
SIO_010081: CA724_RS36800
subclass of: SO_0000673
so part of: CA724_RS36800
location: complement(31351..31734)
location: region:31351-31734:-1
so has part: feature:31351-31734:-1:exon

WP_096649136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31351-31734:-1:exon

CA724_RS36805
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36805
so part of: sequence
location: complement(31868..32152)
location: region:31868-32152:-1
so has part: feature:31868-32152:-1:exon
subclass of: SO_0000010

position:31868:-1
position: 31868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32152:-1
position: 32152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31868-32152:-1:exon

CA724_RS36805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010871312.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix protein, CopG family
translation: MSTSRYQDAKVSTHSELKTKQSTIRLEAELSERLSKVCKANGISREVLIEALFEHYEADPQAWQDILALAKAKGEQRMQVANMKRAQSMMQRFS
SIO_010081: CA724_RS36805
subclass of: SO_0000673
so part of: CA724_RS36805
location: complement(31868..32152)
location: region:31868-32152:-1
so has part: feature:31868-32152:-1:exon

WP_096649154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31868-32152:-1:exon

CA724_RS36810
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36810
old locus tag: NIES22_73410
so part of: sequence
location: complement(32427..33191)
location: region:32427-33191:-1
so has part: feature:32427-33191:-1:exon
subclass of: SO_0000010

position:32427:-1
position: 32427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33191:-1
position: 33191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32427-33191:-1:exon

CA724_RS36810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36810
old locus tag: NIES22_73410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015205636.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MLSCACVSLSGGQGKTTVAFFLSLLLASQGKRVLAIDCDPQANLTFYLNHEVAANQPSLLEVLTGAVTTEDGIYPTQHSNLFLIPADRSLFKVSDYLINSGTGAFILKLRLRNVQSLFDYVIIDVQPSRSQICLTAVGASDTVLIPVEATTKGVNSLIDTLDFLQDQTSIMAFTGQVLGVIPFRDRWIGNTQTIEGKENIAAMREFAGNIPVLPSIRESEQFKRAIRKGKLLSELGYSDLQYPFEQIIKMLTHE
SIO_010081: CA724_RS36810
subclass of: SO_0000673
so part of: CA724_RS36810
location: complement(32427..33191)
location: region:32427-33191:-1
so has part: feature:32427-33191:-1:exon

WP_096649138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32427-33191:-1:exon

CA724_RS36815
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36815
old locus tag: NIES22_73420
so part of: sequence
location: complement(33358..34551)
location: region:33358-34551:-1
so has part: feature:33358-34551:-1:exon
subclass of: SO_0000010

position:33358:-1
position: 33358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34551:-1
position: 34551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33358-34551:-1:exon

CA724_RS36815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36815
old locus tag: NIES22_73420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017655434.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPYLKAKNLTVSSKRLNDELEKVNPHLIYVGGKINFQSELHLEDYIEDNFQKIFPDLALVKRQHNIKMQRCDLLCFTKSCKQPVIIELKNEEDRGLVSQLTRYRKAILQEQPFSDIIDYSLPVKLIAVAPAFHEDNYTDKEASKFEDDICFYEFTIKIHENSARFQICSKTYDIPYPILGLPESQTSSELSPISLSIFIRNFISNLPLESRQDFLALRTLLMAQPKVKEMVSSTYRKVLYATGEGENHKKLAEITNTSKGIILFLWLPTHVKTNIKIPVARFGFILAKDNNPFSEKSIVEWLVCTKTTIDLKNKPNNIGLSFNRHGMSLWTKANQYLFQASLASQNTFQLLIYLLKGIKPPIDEETFTWWNSYKSKTPENLGWYIDLAIKTWNYRFK
SIO_010081: CA724_RS36815
subclass of: SO_0000673
so part of: CA724_RS36815
location: complement(33358..34551)
location: region:33358-34551:-1
so has part: feature:33358-34551:-1:exon

WP_096649140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33358-34551:-1:exon

CA724_RS36820
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS36820
old locus tag: NIES22_73430
so part of: sequence
location: complement(34755..35228)
location: region:34755-35228:-1
so has part: feature:34755-35228:-1:exon
subclass of: SO_0000010

position:34755:-1
position: 34755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35228:-1
position: 35228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34755-35228:-1:exon

CA724_RS36820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS36820
old locus tag: NIES22_73430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016869159.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWEQFIARCKKKGTTATATLTRFIELYLDGSLDDLDTIVGNEDEDKRLESLEQKTEEITAQMKQFAEAIIKIQNYLNNQPKRRNKSYNNSYYQGQTQRIQPLTEEGLASRLGVNVETIREQRINLPPPLFVGWCKGKDRAGLGWEFNPNTGLYHPAS
SIO_010081: CA724_RS36820
subclass of: SO_0000673
so part of: CA724_RS36820
location: complement(34755..35228)
location: region:34755-35228:-1
so has part: feature:34755-35228:-1:exon

WP_096649142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34755-35228:-1:exon