Calothrix brevissima NIES-22 plasmid plasmid3 DNA, complete genome.
type: Entry
definition: Calothrix brevissima NIES-22 plasmid plasmid3 DNA, complete genome.
sequence version: NZ_AP018210.1
sequence date: 2017-09-29
sequence: sequence
division: CON
label: NZ_AP018210.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00079796
keyword: RefSeq
source: Calothrix brevissima NIES-22 (Calothrix brevissima SAG 34.79)
organism: Calothrix brevissima NIES-22
taxonomy: Bacteria; Cyanobacteriota; Cyanophyceae; Nostocales; Calotrichaceae; Calothrix.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence was derived from\nAP018210.\nNBRP Genome Information Upgrading Program.: Genome sequencing of\ncyanobaciteial culture collection at National Institute for\nEnvironmental Studies (NIES).\n\nAnnotated using prokka 1.11 from http://www.vicbioinformatics.com.\nAnnotated at D-FAST https://dfast.nig.ac.jp\n\nAnnotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (released 2013). Information about the Pipeline can be\nfound here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: GS De Novo Assembler v. 2.9\nGenome Coverage :: 90x\nSequencing Technology :: Ilumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Date :: 09/28/2017 12:53:55\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS+\nAnnotation Software revision :: 4.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 7,410\nCDS (total) :: 7,298\nGenes (coding) :: 6,977\nCDS (coding) :: 6,977\nGenes (RNA) :: 112\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 93\nncRNAs :: 4\nPseudo Genes (total) :: 321\nPseudo Genes (ambiguous residues) :: 0 of 321\nPseudo Genes (frameshifted) :: 52 of 321\nPseudo Genes (incomplete) :: 259 of 321\nPseudo Genes (internal stop) :: 55 of 321\nPseudo Genes (multiple problems) :: 37 of 321\nCRISPR Arrays :: 10\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 33326
topology: linear
so has quality: SO_0000987
location: 1..33326
location: region:1-33326:1
RO_0002162: 1973478

NZ_AP018210
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00079796
type: BioSample
SIO_000068: biosample

1
title: Genome sequencing of cyanobaciteial culture collection at National Institute for Environmental Studies (NIES)
author: Hirose, Y.
author: Shimura, Y.
author: Fujisawa, T.
author: Nakamura, Y.
author: Kawachi, M.
journal: Unpublished

2
title: Direct Submission
author: Hirose, Y.
author: Shimura, Y.
author: Fujisawa, T.
journal: Submitted (23-JUN-2017) Contact:Yuu Hirose Toyohashi University of Technology, Department of Environmental and Life Sciences; Hibarigaoka-1-1 Tenpakucho, Toyohashi, Aichi 441-8122, Japan URL :http://mcc.nies.go.jp/ strainList.do?strainId=27&strainNumberEn=NIES-22

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33326:1
position: 33326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-33326:1:source
so part of: sequence
organism: Calothrix brevissima NIES-22
mol type: genomic DNA
strain: NIES-22
culture collection: NIES:22
plasmid: plasmid3

1973478
type: Taxonomy
SIO_000068: taxonomy

CA724_RS35345
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35345
so part of: sequence
location: complement(<1..2325)
location: region:1-2325:-1
so has part: feature:1-2325:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:2325:-1
position: 2325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-2325:-1:exon

CA724_RS35345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015149508.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helicase-related protein
translation: MPLPDYIDNSRHKLQTILKTLIEDENQIVLDIATGFFRIEAWLRLEAAMNRLTSLRLLIGRDPTIRPAESDRIDLIRYFRRDIQQQLEEEEFKAEYKQKIDRMIAYLQQDHILVRLYGATNGEFLHAKAYIFDDYSIIGSSNFTPAGIDTNRELNVLNKQKAIAHDLRHNWFAEFWNDSSVDVDYKTKLIDALNASKFGSKAYTPYQVFLKVLYEFFKDDSIIGESDRTTLELASFQQEGFERAVKLIERHRGCIVADAVGLGKTFIGLRLLEYYLIKDRRPSKVPRALVICPAQLRDLVWEKKLEEFGIKARVLSHEEISRQAFNIHDYARYDIVVVDESHNFRNSATNRYRNLLKLVSSGKRNKRVVLLTATPINNSIFDLYHQILLLTRGGETYYREWGISNLKTYFKSLAKGGVEITELLLQTMVRRSRQDVIRRQAAGEEIRINGKLINFPKRQLEQFTYNFEDTFAGLYKGIANQIDKLNLPAYNIKAFKKRKQKQDEDEVKRNHALVALQKALYFKRFESSLIAFKNSITNQRNFQINFYRLLTEQGKLLDSKNYRKLILAAEDEEESNSVNTLIDSLDEIDSKDYDLKQLQQQIESDLTILNNIITKLEQIESSAAVNTDYDCKLAAFKALLKTQLTGQRLLVFSYFKDTATYLYNQLIADQAWLTEMTVNGKTPVIELLTGATPGKQREEKVKRFAPKANAQSDEELAALRQNPIDILICTDVLSEGQNLQDAGVLVNYDLHWNPVRMIQRAGRIDRLGTDYDELF
SIO_010081: CA724_RS35345
subclass of: SO_0000673
so part of: CA724_RS35345
location: complement(<1..2325)
location: region:1-2325:-1
so has part: feature:1-2325:-1:exon

WP_096648667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-2325:-1:exon

CA724_RS35350
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35350
old locus tag: NIES22_70460
so part of: sequence
location: complement(2337..3110)
location: region:2337-3110:-1
so has part: feature:2337-3110:-1:exon
subclass of: SO_0000010

position:2337:-1
position: 2337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3110:-1
position: 3110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2337-3110:-1:exon

CA724_RS35350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35350
old locus tag: NIES22_70460
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEIIWNTQELLQYCPEQVTNKAKIYFKAVQDKIARILYAVERINNYQSSLPSLISFPDFRKKQLEIVMDLETIAYNLHSLPDVLANIITILIINPLIFTDTSLCFKRDKDINIYSVKDKINVIQTAEYINIQQKQHLENLVAAIEKLIKSSEYEYISALVNTIKHRNLIDTEYIEKISISKFIYLNSSTPSQNMDDANLNTNWTLIEFEKDNNNYPAITIEQLITKYRENIINLFFLVGQEINNYCLATRISNSST
SIO_010081: CA724_RS35350
subclass of: SO_0000673
so part of: CA724_RS35350
location: complement(2337..3110)
location: region:2337-3110:-1
so has part: feature:2337-3110:-1:exon

WP_096648669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2337-3110:-1:exon

CA724_RS35355
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35355
old locus tag: NIES22_70470
so part of: sequence
location: complement(3157..6453)
location: region:3157-6453:-1
so has part: feature:3157-6453:-1:exon
subclass of: SO_0000010

position:3157:-1
position: 3157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6453:-1
position: 6453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3157-6453:-1:exon

CA724_RS35355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35355
old locus tag: NIES22_70470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014274330.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TaqI-like C-terminal specificity domain-containing protein
translation: MPARLLQLDDVRQINSPEKVAFLFQKIGYNAAAQQLAIDDLELPSRSAEAVWDAYMIANHQHGSESLQVLLFQLQSDEWLSPSVASNRMRSLAQSLCRRPSDYLLLGTKDYNQLMLVNPRKNFDFDADMNLKVSIRKLLIDRANPTNYDRDRLEAIAAKNFSPRELYNVQCEAFDVEKLTKEFYRGYREIFEELQRVIKANNPHTYFNDPNRLHQFSQRLLGRIMFLYFLQKKEFLAGDRNFLKNQYNKLRSDLEETDFYAQVLEPLFFEMLNKQRPNMQSPWGQIPYLNGGLFDRDYGKDVIDTAGVETPPEIQLPNSLFDPSGDKGILKFFNSYNFTVSENVQGDEDVAVDPEMLGKVFENMLAADERGQSGTFYTPRGIVQFMCVESLSRYLADQTGLDLEVVKKLTEFDPELPDKDINQLLTREQAKKLKRALESVKVCDPAVGSGAFPMGMMQVILSVKQAIAHREGMTVERGSLTMSQWKRDIIANNLYGVDIKPEAVEIAKLRMWLSLVVDIPSLSDVEPLPNLDYKLMCGDSLISTIQGERLIPDPTKDQQTMLNVTPVQAAIQPLIDLQHQYFEAHAEERKILRGKILEAEKNVFRVALADRLQYWQIEQRNLEQDIRRLKGKASRAQTQKQQAISNKLQELDSIAAEVERGMRSLNFFQWHLHFNEVFQQQGGFDIVIGNPPYVRQEQIKELKPALKEEYDCYTGVADLFVYFYERGFNLLKSGGNLSYITSNKYFRAGYGEKLRQFLGEKSQVQVLIDFGDAPVFEAIAYPSIILVSKSKPNNHQARVLNWEARKSVDEFNLVYKNQSFYMPQKELGADGWRLESPGVLRLLDKLRGMGTPLGEYVNGRFYRGIVTGLNEAFVIDRATGDRLIDEHESSAEVLKPFLRGRDVKRWSVDYQDLWLIFTRRGIDIHKFPAVHDYLLKYKERLAPGIEGGRKAGSYQWYEIQDNIAYWQEFEKVQIVWGNLSTKPNFTFAQAGYYLSAPANLIASDSKYLLGILNCQITQYLVSQSAATRQGGFLEYKPMYVSQLSIPTASKTERLAINNLVQKCLNAKGQGVEDWEAEIDDRVAHLYGLTAEEMKIIRA
SIO_010081: CA724_RS35355
subclass of: SO_0000673
so part of: CA724_RS35355
location: complement(3157..6453)
location: region:3157-6453:-1
so has part: feature:3157-6453:-1:exon

WP_096648671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3157-6453:-1:exon

CA724_RS35360
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35360
old locus tag: NIES22_70480
so part of: sequence
location: complement(6575..6823)
location: region:6575-6823:-1
so has part: feature:6575-6823:-1:exon
subclass of: SO_0000010

position:6575:-1
position: 6575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6823:-1
position: 6823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6575-6823:-1:exon

CA724_RS35360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35360
old locus tag: NIES22_70480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013324825.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MNKHPILGLTQPKCGNLIRDIRLNLGLSQEEFAYLIGVTFSTVNRWENGHAKPSRLAAKNIEKQLLEMGDCGKELLTKHFPN
SIO_010081: CA724_RS35360
subclass of: SO_0000673
so part of: CA724_RS35360
location: complement(6575..6823)
location: region:6575-6823:-1
so has part: feature:6575-6823:-1:exon

WP_096648673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6575-6823:-1:exon

CA724_RS35365
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35365
old locus tag: NIES22_70500
so part of: sequence
location: complement(7380..8240)
location: region:7380-8240:-1
so has part: feature:7380-8240:-1:exon
subclass of: SO_0000010

position:7380:-1
position: 7380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8240:-1
position: 8240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7380-8240:-1:exon

CA724_RS35365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35365
old locus tag: NIES22_70500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007358218.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MVNTAPTTTPIQTPVERLLDMWLHGKSKHTQQAYRRYARAFFSFSNAPLPELGLSHLQAWSDALGGSENSRKTAVSAIKSLFTFAHEIGLIQVNPGKAMKLPKPKDCLSERILSEGEIHTLLALETDIRNKLMLKVLYYCGLRVSELVGLKWKSAIARQVGGQLTIFGKGRKTRVVLVPVPLWRELEAYRGDAGNDEPIFRSREQNVEGNYHMSRVQAWRVVKAASAKIGIKDPSPHWLRHAHASHSLDRGAPIHLVQQTLGHESVATTSRYLHARPGDSSSLYLG
SIO_010081: CA724_RS35365
subclass of: SO_0000673
so part of: CA724_RS35365
location: complement(7380..8240)
location: region:7380-8240:-1
so has part: feature:7380-8240:-1:exon

WP_096648727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7380-8240:-1:exon

CA724_RS35370
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35370
old locus tag: NIES22_70510
so part of: sequence
location: complement(8557..8964)
location: region:8557-8964:-1
so has part: feature:8557-8964:-1:exon
subclass of: SO_0000010

position:8557:-1
position: 8557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8964:-1
position: 8964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8557-8964:-1:exon

CA724_RS35370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35370
old locus tag: NIES22_70510
inference: COORDINATES: protein motif:HMM:PF04266.12
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ASCH domain-containing protein
translation: MKAISLWQPWASLIPLGFKHYETRIWPTKYRGKLLICSTVHKAQHYREFLKIKDVLKLPDWSEANFPHGRAIAVCDLTDCTEMTAEFIGQQTPTEILCGHWLIGSFAWKLENVQAIAVPFPVKGRQKLFDVDFAA
SIO_010081: CA724_RS35370
subclass of: SO_0000673
so part of: CA724_RS35370
location: complement(8557..8964)
location: region:8557-8964:-1
so has part: feature:8557-8964:-1:exon

WP_096648675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8557-8964:-1:exon

CA724_RS35375
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35375
old locus tag: NIES22_70520
so part of: sequence
location: complement(9177..9788)
location: region:9177-9788:-1
so has part: feature:9177-9788:-1:exon
subclass of: SO_0000010

position:9177:-1
position: 9177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9788:-1
position: 9788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9177-9788:-1:exon

CA724_RS35375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35375
old locus tag: NIES22_70520
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQPEEPRTTKQARQETVNLGTNTSIVAFLLDTGEIRYSKAGIAQLLGYATKWINGLRSDAPKLLKALQDKGYTDYAIRVAVRREGKRGATIAETISLDDLNILIAFEAERGNPKAIALLTAGFRQYLIDQSRTAFDLEERTQQEKLDDFEQWRDAFLANYDDWADIEEQETTIAFVAPDWWEVAYYSPTASGYEADPECHQSE
SIO_010081: CA724_RS35375
subclass of: SO_0000673
so part of: CA724_RS35375
location: complement(9177..9788)
location: region:9177-9788:-1
so has part: feature:9177-9788:-1:exon

WP_096648677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9177-9788:-1:exon

CA724_RS35380
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35380
old locus tag: NIES22_70530
so part of: sequence
location: 9994..10395
location: region:9994-10395:1
so has part: feature:9994-10395:1:exon
subclass of: SO_0000010

position:9994:1
position: 9994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10395:1
position: 10395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9994-10395:1:exon

CA724_RS35380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35380
old locus tag: NIES22_70530
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPLVVRDGKVVDTGAIIGSPAWESFLRENSSFRYETANHGGYTATKQNDYWYASRKHQGKLHRKYIGTTSELNINQLDAAAIALSKMAEQAPAKDKKQAVVNNHELQKQVTYLTEQVAALKEELADLRGKLAA
SIO_010081: CA724_RS35380
subclass of: SO_0000673
so part of: CA724_RS35380
location: 9994..10395
location: region:9994-10395:1
so has part: feature:9994-10395:1:exon

WP_096648679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9994-10395:1:exon

CA724_RS35385
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35385
old locus tag: NIES22_70540
so part of: sequence
location: 10951..11634
location: region:10951-11634:1
so has part: feature:10951-11634:1:exon
subclass of: SO_0000010

position:10951:1
position: 10951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11634:1
position: 11634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10951-11634:1:exon

CA724_RS35385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35385
old locus tag: NIES22_70540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011316581.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thermonuclease family protein
translation: MNKTAVLAIAAMLISGLPSLAQTNLPAMTVVSVGDGDTLRARNQQGQAVTIRLACIDAPELKQQPWGQQSAARLKQLLPVGQSIKVRQVDRDKYKRVVAEVYVGDRSINLNMVQEGQAVVYRQYLKGCTNTKDQFLKAEATAKQQKLGFWNQPKPVMPWVFRQGLGTTTQPVVAQPQQQCDPSYPDFCLPPNSPDLDCKDIPYRRFRVNQPDPHKFDRDKDGIGCER
SIO_010081: CA724_RS35385
subclass of: SO_0000673
so part of: CA724_RS35385
location: 10951..11634
location: region:10951-11634:1
so has part: feature:10951-11634:1:exon

WP_096648681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10951-11634:1:exon

CA724_RS35390
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35390
old locus tag: NIES22_70550
pseudo: true
so part of: sequence
location: complement(<11780..>12061)
location: region:11780-12061:-1
so has part: feature:11780-12061:-1:exon
subclass of: SO_0000010

position:11780:-1
position: 11780
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:12061:-1
position: 12061
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11780-12061:-1:exon

CA724_RS35390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35390
old locus tag: NIES22_70550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016864129.1
note: incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: CHAT domain-containing protein
SIO_010081: CA724_RS35390
subclass of: SO_0000673
so part of: CA724_RS35390
location: complement(<11780..>12061)
location: region:11780-12061:-1
so has part: feature:11780-12061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11780-12061:-1:exon

CA724_RS35395
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35395
pseudo: true
so part of: sequence
location: complement(<12688..13020)
location: region:12688-13020:-1
so has part: feature:12688-13020:-1:exon
subclass of: SO_0000010

position:12688:-1
position: 12688
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:13020:-1
position: 13020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12688-13020:-1:exon

CA724_RS35395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016865428.1
note: incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: CHAT domain-containing protein
SIO_010081: CA724_RS35395
subclass of: SO_0000673
so part of: CA724_RS35395
location: complement(<12688..13020)
location: region:12688-13020:-1
so has part: feature:12688-13020:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12688-13020:-1:exon

CA724_RS35400
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35400
pseudo: true
so part of: sequence
location: 14308..>14727
location: region:14308-14727:1
so has part: feature:14308-14727:1:exon
subclass of: SO_0000010

position:14308:1
position: 14308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14727:1
position: 14727
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14308-14727:1:exon

CA724_RS35400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016862896.1
note: internal stop; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA-binding protein
SIO_010081: CA724_RS35400
subclass of: SO_0000673
so part of: CA724_RS35400
location: 14308..>14727
location: region:14308-14727:1
so has part: feature:14308-14727:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14308-14727:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 1973478
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 14983..15018
rpt unit seq: gtttccatccccttgcggggcgatgtgatcgtaaag
so part of: sequence
location: 14909..15678
location: region:14909-15678:1
so has part: feature:14909-15678:1:region

position:14909:1
position: 14909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15678:1
position: 15678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14909-15678:1:region

CA724_RS35405
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35405
old locus tag: NIES22_70580
so part of: sequence
location: 16209..16586
location: region:16209-16586:1
so has part: feature:16209-16586:1:exon
subclass of: SO_0000010

position:16209:1
position: 16209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16586:1
position: 16586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16209-16586:1:exon

CA724_RS35405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35405
old locus tag: NIES22_70580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015179877.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MQITKIDLAPTTVQAVSEWLEARGHYLATSPLFTALDPAHYGHRLSGESLRRMVDQSSQQAGISKKMSPHRVRHSAITAALDATDGNIRKVQKLSRHADPRTLMIYDDNRARDQEELSGLLANMV
SIO_010081: CA724_RS35405
subclass of: SO_0000673
so part of: CA724_RS35405
location: 16209..16586
location: region:16209-16586:1
so has part: feature:16209-16586:1:exon

WP_096648729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16209-16586:1:exon

CA724_RS35410
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35410
old locus tag: NIES22_70590
so part of: sequence
location: complement(17778..18206)
location: region:17778-18206:-1
so has part: feature:17778-18206:-1:exon
subclass of: SO_0000010

position:17778:-1
position: 17778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18206:-1
position: 18206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17778-18206:-1:exon

CA724_RS35410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35410
old locus tag: NIES22_70590
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIYKEGFLKKSLKEVNGLKVQEVKALPAASLELEKYFDEYCLPIRLRCPSGDKKIPAYKRMILVYHPTDENQWFVSAAIAHPVALLTLGYKFTCVERKSRKYIPLPVLEDAVNDRFDNFRQIIRERVRLLAEAAAMVDTLRR
SIO_010081: CA724_RS35410
subclass of: SO_0000673
so part of: CA724_RS35410
location: complement(17778..18206)
location: region:17778-18206:-1
so has part: feature:17778-18206:-1:exon

WP_096648683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17778-18206:-1:exon

CA724_RS35415
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35415
so part of: sequence
location: complement(18212..18469)
location: region:18212-18469:-1
so has part: feature:18212-18469:-1:exon
subclass of: SO_0000010

position:18212:-1
position: 18212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18469:-1
position: 18469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18212-18469:-1:exon

CA724_RS35415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015179967.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MKLRDYQTHVIRDTYAFFRQGIKSALLYAPTGSGKTAIACRMINDCIRKGRRALLGKTVTYSSVGKCRHKCRQVKRRFCKYFSQF
SIO_010081: CA724_RS35415
subclass of: SO_0000673
so part of: CA724_RS35415
location: complement(18212..18469)
location: region:18212-18469:-1
so has part: feature:18212-18469:-1:exon

WP_096648685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18212-18469:-1:exon

CA724_RS35420
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35420
old locus tag: NIES22_70600
so part of: sequence
location: complement(18466..21801)
location: region:18466-21801:-1
so has part: feature:18466-21801:-1:exon
subclass of: SO_0000010

position:18466:-1
position: 18466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21801:-1
position: 21801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18466-21801:-1:exon

CA724_RS35420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35420
old locus tag: NIES22_70600
inference: COORDINATES: protein motif:HMM:PF13148.4
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3987 domain-containing protein
translation: MYITNDHNGNNGLIHVSKLNPCIHCGKPDWCYSLGELSVCKRDAEPAKGWTRTSKQDRDGSYYYAPVQEKAVRSKAKKDYFYLSRDGQPLVKVARIDDGHGKKSFPQSHWDGQQWVSGNPDEIKRKIPIYRYQEVRKAIAAGELIFIVEGEGVADTLWDLGLAATTFIGGSGKYRSYGTGYKEDLAGASVVICPDRDEPGLKHADDIAQDFPNAQWLYAPPNPFFWEHLPKSGGLDIGDWVKDGAKATDIIEQVGDKKYQQASDLVPLIAYLSESDRRLIEHGTLKGTASASDELARNLIGIEARLLEIGENFTGDSRELFDQFNARSKTPLDSKTADQIWWTQKSFSPRSTLSYEELKKRGQWWRDRGTYATQQDLLLGTNVKSVQNESSKVIVHPAVARQTLNGDELLKEINSIFEANLGQSRLEASLLDLAARTGRTSNELWRLYKAREQEDSQMGDREIATKQLPSLLEARKASLTPEQILWGDGGKLAHLIQFTADNMPISPEVLLTTLFPVAGSRIGTSSRLVIKPSTGYTATSIFWSCVVSMTGTLKSPSQQVIIDSLNDFEDDEYQNWKLATDDYKRQMKQRGKGDDLPDEPSPRKRFIIKGSTSEARMKIHGENPRGLLYYRDEWSGFITGRNKYRGGKGDDAQLDLSEFNGEALFKDGVDSEKCIFLKRSAISRTGNTQPDTLKDLQSQGNFEDHTGEFARWLFCLKDNPLPYINLSSDTDEDDKLGNLLKSALGFLYKELGRLPERDYFLSNDAKKIYETYQHQLMDWLKVEENPGLAATYPKLQTYLGRFALWLHLVNAVLAGETTPRQFVDGHTMAVSCHIVDFYLAQARLLYAINSQQQELAGNLLKIKEYIEKRPQGVKLRDIKRGIRAIKDLPNSEIEQDLNTLVSTGVITQVSKVYYPMSVKNVNTGDKVGTVCHHPKSYTDIEVQDFVNSGNKFLSNFEKQTSLDGYQTSNREILSIVQSVPTVDNLDESLTQQASPLLTTCPQSVPTVDVCYGVSNELSNSGNTPLAEQSNDSRNDHCVNEPIPQSPMPLTEVDPDEYIGQTCEKRGLRTTQSGILADIDNHNWIAKIELPDGTTIAANYNECFVLARGGQK
SIO_010081: CA724_RS35420
subclass of: SO_0000673
so part of: CA724_RS35420
location: complement(18466..21801)
location: region:18466-21801:-1
so has part: feature:18466-21801:-1:exon

WP_096648687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18466-21801:-1:exon

CA724_RS35425
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35425
old locus tag: NIES22_70610
so part of: sequence
location: complement(22288..22680)
location: region:22288-22680:-1
so has part: feature:22288-22680:-1:exon
subclass of: SO_0000010

position:22288:-1
position: 22288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22680:-1
position: 22680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22288-22680:-1:exon

CA724_RS35425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35425
old locus tag: NIES22_70610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010999657.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDAPEQPTRLDRIEAILERVAVQQVELSNKQNIAQDQIITLESALAELANRQANTQNQLEELLTTATNIFNRDAVLNDVLLELHQSHEQNQVQFAEHQRRFEENQQSTNAALRSLEAILLQLIRRFPEE
SIO_010081: CA724_RS35425
subclass of: SO_0000673
so part of: CA724_RS35425
location: complement(22288..22680)
location: region:22288-22680:-1
so has part: feature:22288-22680:-1:exon

WP_096648689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22288-22680:-1:exon

CA724_RS35430
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35430
old locus tag: NIES22_70620
so part of: sequence
location: complement(22695..22934)
location: region:22695-22934:-1
so has part: feature:22695-22934:-1:exon
subclass of: SO_0000010

position:22695:-1
position: 22695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22934:-1
position: 22934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22695-22934:-1:exon

CA724_RS35430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35430
old locus tag: NIES22_70620
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLRYDADGINCHDTESMIKQLPQVKRRDAGTSAVQAFFTLEEKEMIKNFCDRMGWDASHFIRCLALGYIAANAETNDQ
SIO_010081: CA724_RS35430
subclass of: SO_0000673
so part of: CA724_RS35430
location: complement(22695..22934)
location: region:22695-22934:-1
so has part: feature:22695-22934:-1:exon

WP_096648691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22695-22934:-1:exon

CA724_RS35435
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35435
old locus tag: NIES22_70630
so part of: sequence
location: complement(22958..23167)
location: region:22958-23167:-1
so has part: feature:22958-23167:-1:exon
subclass of: SO_0000010

position:22958:-1
position: 22958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23167:-1
position: 23167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22958-23167:-1:exon

CA724_RS35435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35435
old locus tag: NIES22_70630
inference: COORDINATES: protein motif:HMM:PF07878.9
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKATNPKPRMAYAIDTENKNFLDQWAEEEGRSTANLVERLLLDAIARKKRDSTLRVASSGKNMSDRKT
SIO_010081: CA724_RS35435
subclass of: SO_0000673
so part of: CA724_RS35435
location: complement(22958..23167)
location: region:22958-23167:-1
so has part: feature:22958-23167:-1:exon

WP_096648693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22958-23167:-1:exon

CA724_RS35440
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35440
old locus tag: NIES22_70640
so part of: sequence
location: 23811..24173
location: region:23811-24173:1
so has part: feature:23811-24173:1:exon
subclass of: SO_0000010

position:23811:1
position: 23811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24173:1
position: 24173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23811-24173:1:exon

CA724_RS35440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35440
old locus tag: NIES22_70640
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: HTH domain-containing protein
translation: MILLDLEPIKSDISISALSEEIGISRTTIYKYKDLAEYILDFERDYPSFDGEPITNGSGLTEYQSWVIQALISYRRKRGLTMDALKAYIKSAKNQVWVTKQSYREYQEKFANGHEAIRQQ
SIO_010081: CA724_RS35440
subclass of: SO_0000673
so part of: CA724_RS35440
location: 23811..24173
location: region:23811-24173:1
so has part: feature:23811-24173:1:exon

WP_096648695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23811-24173:1:exon

CA724_RS35445
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35445
old locus tag: NIES22_70650
so part of: sequence
location: 24145..24726
location: region:24145-24726:1
so has part: feature:24145-24726:1:exon
subclass of: SO_0000010

position:24145:1
position: 24145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24726:1
position: 24726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24145-24726:1:exon

CA724_RS35445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35445
old locus tag: NIES22_70650
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDTKQYANSKEIPTRTVIEACKELFGDVPKGELNADQIAALDAKLAGKPNLPALPDAGDKLANKPGINAEIDYKGLPEAKFNQLVEAFISQGVSEAEALIHLRDEAFIRTLQNADLNLADGAINAAIARIIRNKAIASRSQDIINARIVEVQSQDIAGLIEAAKSEVSSSQPWRAFLPEANDSQPWKAFLEDL
SIO_010081: CA724_RS35445
subclass of: SO_0000673
so part of: CA724_RS35445
location: 24145..24726
location: region:24145-24726:1
so has part: feature:24145-24726:1:exon

WP_096648697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24145-24726:1:exon

CA724_RS35450
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35450
old locus tag: NIES22_70660
so part of: sequence
location: 24729..25205
location: region:24729-25205:1
so has part: feature:24729-25205:1:exon
subclass of: SO_0000010

position:24729:1
position: 24729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25205:1
position: 25205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24729-25205:1:exon

CA724_RS35450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35450
old locus tag: NIES22_70660
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLTPKNLIYGVSAIGAAVSLIGGGNMGNSLDALNRLRAANQQEMVTSAELERAEASRKQQTVIANDRYKACELIVAGGGKQKITFPAINPATVITDRNTGAPLVRGTVVCDAYGNTAILDQQGKATAFAFTGDRNAVQIRMKRYRGGLYAQPVAGGQ
SIO_010081: CA724_RS35450
subclass of: SO_0000673
so part of: CA724_RS35450
location: 24729..25205
location: region:24729-25205:1
so has part: feature:24729-25205:1:exon

WP_096648699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24729-25205:1:exon

CA724_RS35455
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35455
old locus tag: NIES22_70670
so part of: sequence
location: 25205..25882
location: region:25205-25882:1
so has part: feature:25205-25882:1:exon
subclass of: SO_0000010

position:25882:1
position: 25882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25205-25882:1:exon

CA724_RS35455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35455
old locus tag: NIES22_70670
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLPNFKLAGWFIWLMLCIVGGILIGALHVNIVPYQKLAASFLAPSAGDPNAGFGFLRMLPGFGKLAQVLGFVSAYVIGAFAYALVQFLELAPNLIHRSPKTLKGLLASSGGQKYALKEGDKGTVKRIKKSLNQGLVWALAHLEVIKSIAYIFDAFICFIAYPFIKELAGVGDFFGVFFTGQWNRIDWQNLLLFAITVYGVESLLKLIWALQDLEKASRSQQQQD
SIO_010081: CA724_RS35455
subclass of: SO_0000673
so part of: CA724_RS35455
location: 25205..25882
location: region:25205-25882:1
so has part: feature:25205-25882:1:exon

WP_096648701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25205-25882:1:exon

CA724_RS35460
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35460
old locus tag: NIES22_70680
so part of: sequence
location: 25922..27298
location: region:25922-27298:1
so has part: feature:25922-27298:1:exon
subclass of: SO_0000010

position:25922:1
position: 25922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27298:1
position: 27298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25922-27298:1:exon

CA724_RS35460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35460
old locus tag: NIES22_70680
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNENNQTHELTKREELILAALENSQEEGGEALVLGGILAGFVVGSVFNPFLGGFLALAISGGTLASQFQRGRDRMKMLSGELPIAGKLEGEDLDEYKSLVGEEQFTLELSQLQNGKYELSEDAAKLVRANSAIAINPVEQLAMYASRNCLVLGIGGDGKDFLVSNAIRDIKREQPEIKLFIIDPKGLQTEATYYQGVADVFRSNQCGETSDENAIAWFKQVFEEWRTVAGKEGERWLLIVTETTLIGEAFSRSKDNYLKEVISKQLTTGGGFGKSCWVLAQFPNLADLGMSNNSRSQLNVFAVVKRESVTTAASQWSRTKIIGKIDHHELEALCEASPVNRCFYSPASGRWSMMPELPNYSAYNRDKHQRVKPASLAPISEPQAPTVIQDAPAQQSTQSEVEKVFQALEEAQTTDIIEALKTAYPEIPNNQLNTVIDRIKQEAIAQRRYAIISKFSL
SIO_010081: CA724_RS35460
subclass of: SO_0000673
so part of: CA724_RS35460
location: 25922..27298
location: region:25922-27298:1
so has part: feature:25922-27298:1:exon

WP_096648702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25922-27298:1:exon

CA724_RS35465
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35465
old locus tag: NIES22_70690
so part of: sequence
location: 27336..27545
location: region:27336-27545:1
so has part: feature:27336-27545:1:exon
subclass of: SO_0000010

position:27336:1
position: 27336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27545:1
position: 27545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27336-27545:1:exon

CA724_RS35465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35465
old locus tag: NIES22_70690
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVINRALEIDQTCGGEVLQTLNEILEQLQNFKAQHPQVFRHLCTTGADVTLADAIAAVQAATDYLLEGK
SIO_010081: CA724_RS35465
subclass of: SO_0000673
so part of: CA724_RS35465
location: 27336..27545
location: region:27336-27545:1
so has part: feature:27336-27545:1:exon

WP_096648704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27336-27545:1:exon

CA724_RS35470
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35470
old locus tag: NIES22_70700
so part of: sequence
location: 27545..27817
location: region:27545-27817:1
so has part: feature:27545-27817:1:exon
subclass of: SO_0000010

position:27817:1
position: 27817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27545-27817:1:exon

CA724_RS35470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35470
old locus tag: NIES22_70700
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQELEPIYESTRLQGGAVYQINGVLYKYLYSDPYARIDHPRFKFSPLPGQRRKSELVLNKNSLRKAYFVPSYRASQVSTVSEDAVQMSLF
SIO_010081: CA724_RS35470
subclass of: SO_0000673
so part of: CA724_RS35470
location: 27545..27817
location: region:27545-27817:1
so has part: feature:27545-27817:1:exon

WP_096648706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27545-27817:1:exon

CA724_RS35475
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35475
old locus tag: NIES22_70710
so part of: sequence
location: 27904..28095
location: region:27904-28095:1
so has part: feature:27904-28095:1:exon
subclass of: SO_0000010

position:27904:1
position: 27904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28095:1
position: 28095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27904-28095:1:exon

CA724_RS35475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35475
old locus tag: NIES22_70710
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRQEVFTSDRDDKDNLSIQFNPPVHYTPTEVEAGNKLVEVINDPSLTEGEKKDAVWSILNNL
SIO_010081: CA724_RS35475
subclass of: SO_0000673
so part of: CA724_RS35475
location: 27904..28095
location: region:27904-28095:1
so has part: feature:27904-28095:1:exon

WP_096648708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27904-28095:1:exon

CA724_RS35480
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35480
old locus tag: NIES22_70720
so part of: sequence
location: 28092..28283
location: region:28092-28283:1
so has part: feature:28092-28283:1:exon
subclass of: SO_0000010

position:28092:1
position: 28092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28283:1
position: 28283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28092-28283:1:exon

CA724_RS35480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35480
old locus tag: NIES22_70720
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQKQIDKIARVVVKAIAYPFDAIMTAYDRYQTLLCNSQKAYKIHVAALIALLLISVICRLIA
SIO_010081: CA724_RS35480
subclass of: SO_0000673
so part of: CA724_RS35480
location: 28092..28283
location: region:28092-28283:1
so has part: feature:28092-28283:1:exon

WP_096648710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28092-28283:1:exon

CA724_RS35485
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35485
old locus tag: NIES22_70730
so part of: sequence
location: 28300..28755
location: region:28300-28755:1
so has part: feature:28300-28755:1:exon
subclass of: SO_0000010

position:28300:1
position: 28300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28755:1
position: 28755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28300-28755:1:exon

CA724_RS35485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35485
old locus tag: NIES22_70730
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTKPQLPFGGDPEVLNRMVESFKQPKLMLMTNRDRLKFLHALLIERLIAEKDVQGILEAIAALRSEQNQEISDKPALSSVLGNISITALLLLITAAFFNPGFIGVNCDTITNGKSTFTNRSDYCQAVRRANRFFNNYTKEITKTQEPDKD
SIO_010081: CA724_RS35485
subclass of: SO_0000673
so part of: CA724_RS35485
location: 28300..28755
location: region:28300-28755:1
so has part: feature:28300-28755:1:exon

WP_096648712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28300-28755:1:exon

CA724_RS35490
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35490
old locus tag: NIES22_70740
so part of: sequence
location: 29033..29665
location: region:29033-29665:1
so has part: feature:29033-29665:1:exon
subclass of: SO_0000010

position:29033:1
position: 29033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29665:1
position: 29665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29033-29665:1:exon

CA724_RS35490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35490
old locus tag: NIES22_70740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019505528.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MIISVQNQKGGVGKTTLAIHISHGLVLKGHSVLLVDADPQGSSRDWAAARGEKPPFPVVGLDRPTIHRDLPALAKDYEDVVIDGPPRVSDLARSAIIAADVVVIPIQPSPYDIWAADEVVKLIQEASVFKENIKAVFVINRKIVNTAIGRDVVEALEQYPFPVLKSAISQRVVFAESAASGNTVLEVDKSGSAAKEVKALVNELLKLGVE
SIO_010081: CA724_RS35490
subclass of: SO_0000673
so part of: CA724_RS35490
location: 29033..29665
location: region:29033-29665:1
so has part: feature:29033-29665:1:exon

WP_096648714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29033-29665:1:exon

CA724_RS35495
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35495
old locus tag: NIES22_70750
so part of: sequence
location: 29666..29920
location: region:29666-29920:1
so has part: feature:29666-29920:1:exon
subclass of: SO_0000010

position:29666:1
position: 29666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29920:1
position: 29920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29666-29920:1:exon

CA724_RS35495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35495
old locus tag: NIES22_70750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014003879.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAKKVNLGKKPEARESVDLDNWVSDRSALVSQPEQAPPEKMKRLTLDIPESLHKAIKRQAVDAGVTMADLLRDLLEQHYGTKQ
SIO_010081: CA724_RS35495
subclass of: SO_0000673
so part of: CA724_RS35495
location: 29666..29920
location: region:29666-29920:1
so has part: feature:29666-29920:1:exon

WP_096648717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29666-29920:1:exon

CA724_RS35500
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35500
old locus tag: NIES22_70760
so part of: sequence
location: complement(29974..30186)
location: region:29974-30186:-1
so has part: feature:29974-30186:-1:exon
subclass of: SO_0000010

position:29974:-1
position: 29974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30186:-1
position: 30186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29974-30186:-1:exon

CA724_RS35500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35500
old locus tag: NIES22_70760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015116152.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNIHNLNMTDTEYAALVAKGYDPNLELELIELGESPAIARKLTQIVGLTQDKPPQTDEEWEEFMKVWED
SIO_010081: CA724_RS35500
subclass of: SO_0000673
so part of: CA724_RS35500
location: complement(29974..30186)
location: region:29974-30186:-1
so has part: feature:29974-30186:-1:exon

WP_096648719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29974-30186:-1:exon

CA724_RS35505
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35505
old locus tag: NIES22_70770
so part of: sequence
location: complement(30322..31092)
location: region:30322-31092:-1
so has part: feature:30322-31092:-1:exon
subclass of: SO_0000010

position:30322:-1
position: 30322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31092:-1
position: 31092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30322-31092:-1:exon

CA724_RS35505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35505
old locus tag: NIES22_70770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015217703.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF559 domain-containing protein
translation: MNVQKQTTGTKFNPSGEEHNLDESAIILKSSNSRYFVELRTSSLIDYLLKIYSNNNYTRKSIGDWLYIRTKPGFYKELASNLNLAYADQRDGQTTQHWWKLLFNEEWKQSILNNIKIEISLVKSKISKDDTNAQHQWGGLNFRSKTEVRVAHALYNQRVLFFANSRAYMDLTDLPISNIDNNQLKERVEIDFLVFYKQKCMILEVDGEHHQQASQKTRDYRRDRVLLRDGIRTVRFNASECYNHPLEVVTEFLNLF
SIO_010081: CA724_RS35505
subclass of: SO_0000673
so part of: CA724_RS35505
location: complement(30322..31092)
location: region:30322-31092:-1
so has part: feature:30322-31092:-1:exon

WP_096648721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30322-31092:-1:exon

CA724_RS35510
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35510
old locus tag: NIES22_70780
so part of: sequence
location: complement(31094..31528)
location: region:31094-31528:-1
so has part: feature:31094-31528:-1:exon
subclass of: SO_0000010

position:31094:-1
position: 31094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31528:-1
position: 31528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31094-31528:-1:exon

CA724_RS35510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35510
old locus tag: NIES22_70780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006625378.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EVE domain-containing protein
translation: MSYWLFQGNPKYYRIIDGIRDFEQMPWLATRYAKDMAPGDGVLIWKAGDKAGIYAIAEIVESPKIIANPPDIGYWLDTSRIGVKPCAKIRFTSKLLEKPLLREDLKLDSVLKTLMVIRQPNCTNYKVTQQEWQRVHELRCYSAQ
SIO_010081: CA724_RS35510
subclass of: SO_0000673
so part of: CA724_RS35510
location: complement(31094..31528)
location: region:31094-31528:-1
so has part: feature:31094-31528:-1:exon

WP_096648723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31094-31528:-1:exon

CA724_RS35515
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35515
old locus tag: NIES22_70790
so part of: sequence
location: complement(31772..32389)
location: region:31772-32389:-1
so has part: feature:31772-32389:-1:exon
subclass of: SO_0000010

position:31772:-1
position: 31772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32389:-1
position: 32389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31772-32389:-1:exon

CA724_RS35515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35515
old locus tag: NIES22_70790
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGLNQINTFKFKDLFMDINKVYTQERERIINIAPEKYVNRSLAEEMIKKTAYWYSRSSSQLPVHAPNHFKRIYDPVGKRYALSMALSGEKISSPIKSDWRIDFGSNTFLISKAILRCQSTLLAFLDSAESGDILKLVDLKDNLKMNVRQSVANHTGQEYEGYYSGFDGNHLIFGTQSISTEDFVNVILSKVNIHRIFNSNTSSS
SIO_010081: CA724_RS35515
subclass of: SO_0000673
so part of: CA724_RS35515
location: complement(31772..32389)
location: region:31772-32389:-1
so has part: feature:31772-32389:-1:exon

WP_096648725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31772-32389:-1:exon

CA724_RS35520
type: Gene
subclass of: SO_0000704
RO_0002162: 1973478
locus tag: CA724_RS35520
old locus tag: NIES22_70800
pseudo: true
so part of: sequence
location: complement(32367..>33326)
location: region:32367-33326:-1
so has part: feature:32367-33326:-1:exon
subclass of: SO_0000010

position:32367:-1
position: 32367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33326:-1
position: 33326
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32367-33326:-1:exon

CA724_RS35520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1973478
locus tag: CA724_RS35520
old locus tag: NIES22_70800
inference: COORDINATES: ab initio prediction:GeneMarkS+
note: incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
pseudo: true
codon start: 1
transl table: 11
product: helicase
SIO_010081: CA724_RS35520
subclass of: SO_0000673
so part of: CA724_RS35520
location: complement(32367..>33326)
location: region:32367-33326:-1
so has part: feature:32367-33326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32367-33326:-1:exon