Endosymbiont of Pachyrhynchus infernalis isolate NARPIN1 chromosome, complete genome.
type: Entry
definition: Endosymbiont of Pachyrhynchus infernalis isolate NARPIN1 chromosome, complete genome.
sequence version: NZ_AP018160.1
sequence date: 2022-12-27
sequence: sequence
division: CON
label: NZ_AP018160.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00080338
keyword: RefSeq
source: endosymbiont of Pachyrhynchus infernalis
organism: endosymbiont of Pachyrhynchus infernalis
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Candidatus Nardonella.
reference: 1
references: 28923972
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP018160.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet assembler v. 1.2.07\nGenome Coverage :: 380X\nSequencing Technology :: Hiseq2000\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/27/2022 01:31:19\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 253\nCDSs (total) :: 213\nGenes (coding) :: 211\nCDSs (with protein) :: 211\nGenes (RNA) :: 40\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 2\nPseudo Genes (total) :: 2\nCDSs (without protein) :: 2\nPseudo Genes (ambiguous residues) :: 0 of 2\nPseudo Genes (frameshifted) :: 1 of 2\nPseudo Genes (incomplete) :: 1 of 2\nPseudo Genes (internal stop) :: 0 of 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 226299
topology: circular
so has quality: SO_0000988
location: 1..226299
location: region:1-226299:1
RO_0002162: 1971488

NZ_AP018160
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00080338
type: BioSample
SIO_000068: biosample

1
title: Small genome symbiont underlies cuticle hardness in beetles
author: Anbutsu, H.
author: Moriyama, M.
author: Nikoh, N.
author: Hosokawa, T.
author: Futahashi, R.
author: Tanahashi, M.
author: Meng, X.Y.
author: Kuriwada, T.
author: Mori, N.
author: Oshima, K.
author: Hattori, M.
author: Fujie, M.
author: Satoh, N.
author: Maeda, T.
author: Shigenobu, S.
author: Koga, R.
author: Fukatsu, T.
journal: Proc Natl Acad Sci U S A 114 (40), E8382-E8391 (2017)
pubmed: 28923972
comments: DOI:10.1073/pnas.1712857114

28923972
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Anbutsu, H.
author: Nikoh, N.
author: Hosokawa, T.
author: Maeda, T.
author: Shigenobu, S.
author: Koga, R.
author: Fukatsu, T.
journal: Submitted (13-JUN-2017) Contact:Naruo Nikoh The Open University of Japan; 2-11 Wakaba, Mihama, Chiba, Chiba 261-8586, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226299:1
position: 226299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-226299:1:source
so part of: sequence
organism: endosymbiont of Pachyrhynchus infernalis
mol type: genomic DNA
isolate: NARPIN1
isolation source: bacteriome
host: Pachyrhynchus infernalis
country: Japan: Okinawa
collection date: 2012

1971488
type: Taxonomy
SIO_000068: taxonomy

NARPIN1_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: dnaN
locus tag: NARPIN1_RS00005
old locus tag: NARPIN1_00010
so part of: sequence
location: 50..1168
location: region:50-1168:1
so has part: feature:50-1168:1:exon
subclass of: SO_0000010

position:50:1
position: 50
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168:1
position: 1168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50-1168:1:exon

NARPIN1_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: dnaN
locus tag: NARPIN1_RS00005
old locus tag: NARPIN1_00010
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:TIGR00663.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MKFSILCNTFIKMLKKTNIVFNNNSLQIFKNILILINNKEIKIISMNSLTKIITKDNLIESNINKIIKINISAKKIFDICKKIDKNSILYFNKENNFLILKSNKSIFSISTIINCNILNEFNKHYDNDYKICISCLSLKNLIKKTYYSIGIEDTRKYLNGMLFEIYDNKIKTISTDGHRLSISELKINFEIKNKNKYILTKQGVNELIKYLDNINNNIYIKFDNKNIYIKSENSLFISRLLNENFPEYNDIISKELKYSIKLNKNVLIEVILRISSISNDKFCLIRLNFNNNKLNISSFNSDQEKSEEYIDIDYLFDDDILILLNSTYLIESLSSIDEEFILFKFINNKSCICIEEFSNINNKHIIMPIYSL
SIO_010081: NARPIN1_RS00005
subclass of: SO_0000673
so part of: NARPIN1_RS00005
location: 50..1168
location: region:50-1168:1
so has part: feature:50-1168:1:exon

WP_130579014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50-1168:1:exon

NARPIN1_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: gyrB
locus tag: NARPIN1_RS00010
old locus tag: NARPIN1_00020
so part of: sequence
location: 1173..3572
location: region:1173-3572:1
so has part: feature:1173-3572:1:exon
subclass of: SO_0000010

position:1173:1
position: 1173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3572:1
position: 3572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173-3572:1:exon

NARPIN1_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: gyrB
locus tag: NARPIN1_RS00010
old locus tag: NARPIN1_00020
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004236715.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MSKYDSSSIKVLKGLDAVKKRPGMYIGNTDDGTGFHHMLFEVIDNSIDEYLAGYCNKISVCIYKDNSISVEDNGRGIPIDIHKEENISAAELIMTTLHAGGKFDNLSYEISGGLHGVGISVVNALSEKLQLIIYRNGYIYEQIYSYGLPKDKIKIIGKSNNNGTFIRFWPDLNIFTNNTNFQFNLILSRLKEISYLNSNISIQLEDLRKDNSKKIIENNDGIKSFIKDLIKDKDVIHNNIFYMNSNKNNINVEIALQWINSFQDIVYCFTNNIKQKDGGTHLSGFRSSITKTINNYIEKEEIYKRSKLNIIGEDTREGLVSVISIKYSSPKFSSQTKDKLISPEIKNVVESLLSDYLMDFLLENQNDSKLIINKIIQSSKSREAAKKAKETIRKKNNDIFNLLGKLSDCQENNPDLSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKIINVEKSKIDKILSSQEIVSLITALGCGIENHNFNIDKIRYKKIIIMTDADIDGSHIRTLLLTFFYRYIPEIINNGYLFIAQPPLYKIKFNKNEIFIKTHNELIDFKIKLFTKNITLFYDNKSISSIELEEILRLYIDVNNLIIKLKNIYPYILLNEILNSEYTINKNDLYNFNKINKWSEDICLNINKQFKFEKCTFNIFNNNNIFEPIFIINDYLCNEYKIDNCFLESNEYKKILNFIKIKNKIIFDNKSYIKYNNLVKEVNSFKDFINYIINDSRINIDIQRYKGLGEMNPDQLWYSTMDPNNRTLLKVLVENNNKSDNLFSILMGDNVESRKKFIEENSLNVNNLDI
SIO_010081: NARPIN1_RS00010
subclass of: SO_0000673
so part of: NARPIN1_RS00010
location: 1173..3572
location: region:1173-3572:1
so has part: feature:1173-3572:1:exon

WP_232021811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1173-3572:1:exon

NARPIN1_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01265
old locus tag: NARPIN1_00030
so part of: sequence
location: complement(3570..3654)
location: region:3570-3654:-1
so has part: feature:3570-3654:-1:exon
subclass of: SO_0000663

position:3570:-1
position: 3570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3654:-1
position: 3654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3570-3654:-1:exon

NARPIN1_RS01265
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS01265
old locus tag: NARPIN1_00030
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3618..3620),aa:Ser,seq:cga)
SIO_010081: NARPIN1_RS01265
subclass of: SO_0000673
so part of: NARPIN1_RS01265
location: complement(3570..3654)
location: region:3570-3654:-1
so has part: feature:3570-3654:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3570-3654:-1:exon

NARPIN1_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: lysS
locus tag: NARPIN1_RS00015
old locus tag: NARPIN1_00040
so part of: sequence
location: complement(3662..5128)
location: region:3662-5128:-1
so has part: feature:3662-5128:-1:exon
subclass of: SO_0000010

position:3662:-1
position: 3662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5128:-1
position: 5128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3662-5128:-1:exon

NARPIN1_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: lysS
locus tag: NARPIN1_RS00015
old locus tag: NARPIN1_00040
EC number: 6.1.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053933.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysine--tRNA ligase
translation: MNNKEYIVRVKKLETIKNDNLIFREKFNINYSIKNIRYIFNNNKLNHKLLNKNIKIAGRVINKRVFGKLTFLKIQDVDNYIQIYLDMNFISKKIYLYQNKFIDIGDIIGVEGFIFITKTNELSINCKYIYLLVKCLYPLANKYLGLLDDKIKSKKRYLDLISNRKSCNNFILRSKFIKEIRNFLHKRNFIEVETPIIQNIPGGADANPFITKYNYLKNKKLYLRIAPELYLKQLLIGGFNKIFEIGKNFRNEGLSIYHNPEFTTMEIYVTYVDFKYLIKLVEKMIKYICIKVLNKTSINFKNCNIDFNKKFNIISMKDSIYYFNNIEKNININNINDCILISKINNILIEKEWSLGRIQFEIFKKTVEKNIKYPTFITEYPIDVSPLSKRNVINSNIADRFELFICGLEIGNGFSELNDPEDQKNRFTNQKLENNNSIIDKEYIDSMKYGLPISSGVGIGIDRLIMILTNSNNIKDIILFPNIRYKDN
SIO_010081: NARPIN1_RS00015
subclass of: SO_0000673
so part of: NARPIN1_RS00015
location: complement(3662..5128)
location: region:3662-5128:-1
so has part: feature:3662-5128:-1:exon

WP_130579019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3662-5128:-1:exon

NARPIN1_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00020
old locus tag: NARPIN1_00050
so part of: sequence
location: complement(5146..5910)
location: region:5146-5910:-1
so has part: feature:5146-5910:-1:exon
subclass of: SO_0000010

position:5146:-1
position: 5146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5910:-1
position: 5910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5146-5910:-1:exon

NARPIN1_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00020
old locus tag: NARPIN1_00050
inference: COORDINATES: protein motif:HMM:NF012684.2
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PCRF domain-containing protein
translation: MNKYNDFFTNSDDISCFISIISGSGGIESQDWVNILFRMYIKWIKIKNLKYKILSEDKFFIKRKKSVLIYVEGKYAYGWLKTENGIHRLVRKSPFDSGKRHTSFSSVYIKKNIDENLDVNLNNNDIKFSFCKSSGNGGQHINKTNSAVRVFHIPTGINVKSNDSKYQNINKKNALKRLKNKIYNIKLNNKIKNNKKIEDLKSDISWGRQIRSYILDDSIIKDNLTGLETNNIKEVLNGNLSIFIEKCLKNKLYK
SIO_010081: NARPIN1_RS00020
subclass of: SO_0000673
so part of: NARPIN1_RS00020
location: complement(5146..5910)
location: region:5146-5910:-1
so has part: feature:5146-5910:-1:exon

WP_130579021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5146-5910:-1:exon

NARPIN1_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: recJ
locus tag: NARPIN1_RS00025
old locus tag: NARPIN1_00060
so part of: sequence
location: complement(5938..7680)
location: region:5938-7680:-1
so has part: feature:5938-7680:-1:exon
subclass of: SO_0000010

position:5938:-1
position: 5938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7680:-1
position: 7680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5938-7680:-1:exon

NARPIN1_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: recJ
locus tag: NARPIN1_RS00025
old locus tag: NARPIN1_00060
inference: COORDINATES: protein motif:HMM:TIGR00644.1
GO function: GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded-DNA-specific exonuclease RecJ
translation: MKDFIKLNRRSKEINNNLNNFNIPEIIKKIYSNRGITSINDINLNIDNIFNYKLFKNINKAINILINFLFNNEKIVIVGDFDTDGVTSTALCFIALKKMGFNNVDFIIPNRFKDGHGLSINIIEKIISINGKLILTVDNGISSFDEINLAKKNNILTIITDHHIPKKILPKANVIINPNLNDCKFPSKYISGVGISYYLMKALNNKLINLNWFKNNSISIPNINNLLDLVAIGTIADMSYLDTNNRILIKEGINIIKSKNCRLGIITLIEYLNIDIENLSTLDINFYIVPRINSAGRLKDMSISIKLLLTEDKHEALYISKELNILNSIRKKISKDMELKCLNILDNLYESDKKYSLIIYNLDFHNGILGIVSSRLKDKFNKPTIVFSKLNNDILIGSGRSIENINIYEIINSINNLYPDLILKFGGHNFAIGLSLNIKNFEYFKNIFNIQISNYINKNNLDNNNYKIIWSDGELLDSEFTLSNVKHINNNGPWGNGFPYPIFDGKFYLIHKEFFNKNILKIIVKTFNGLIINGILFNVDIDFWNNLKSNKLVLAYKLYYSKYFNDNKIQILVEYAYELF
SIO_010081: NARPIN1_RS00025
subclass of: SO_0000673
so part of: NARPIN1_RS00025
location: complement(5938..7680)
location: region:5938-7680:-1
so has part: feature:5938-7680:-1:exon

WP_130579023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5938-7680:-1:exon

NARPIN1_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00030
old locus tag: NARPIN1_00070
so part of: sequence
location: complement(7703..9250)
location: region:7703-9250:-1
so has part: feature:7703-9250:-1:exon
subclass of: SO_0000010

position:7703:-1
position: 7703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9250:-1
position: 9250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7703-9250:-1:exon

NARPIN1_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00030
old locus tag: NARPIN1_00070
inference: COORDINATES: protein motif:HMM:NF004952.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S1
translation: MIKNFSNFFKKSVENINVQPGEILKGKVINIFKDFILVDVNLKSESYVPINEFIDNDKLNIKIGDEIDFILESIDNNYGETIISRDKAKQYEYWNELEEYYKCDKSIYGYVIERIKGGFSVEINNVRAFLPGSLVDFKSISDSYNLEGKKLEFKVVKIDKKTNNIVVSRKAVIESEDNYEKKNLINNLKKDDIVKGIVKNITNYGVFLDLGGIDGLLHITDITWKRIKHPSEIVKIGDEINVKIIKFDYDKFRVYLGLKQLVDDPWYCIIKKYPKGLIISGKVTNLTDYGCFVEIENGIEGLVHISEMDWRNKNINPYEIVNLNEVIKVMILNIDISKRRISLGIKQCKKNPWNDFYKKYKIGDIVIGNIKSITNFGIFIELNNENVDGLVHITDISWLIDKNNDINKYSKGDEIKSIILNIDTDKNRISLGIKQLFKDPFEDFINIKSIGDIIPGKIIDINNNNLIIYINDYVLGNYNLDLNTIKNKDDIYIGNILNFKIHDFDIKNRIIICII
SIO_010081: NARPIN1_RS00030
subclass of: SO_0000673
so part of: NARPIN1_RS00030
location: complement(7703..9250)
location: region:7703-9250:-1
so has part: feature:7703-9250:-1:exon

WP_130579025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7703-9250:-1:exon

NARPIN1_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: aroA
locus tag: NARPIN1_RS00035
old locus tag: NARPIN1_00080
so part of: sequence
location: complement(9289..10578)
location: region:9289-10578:-1
so has part: feature:9289-10578:-1:exon
subclass of: SO_0000010

position:9289:-1
position: 9289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10578:-1
position: 10578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9289-10578:-1:exon

NARPIN1_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: aroA
locus tag: NARPIN1_RS00035
old locus tag: NARPIN1_00080
EC number: 2.5.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008813007.1
GO function: GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-phosphoshikimate 1-carboxyvinyltransferase
translation: MKDNININSINSVKGEVVIPGSKSISNRVLLLSSFSMGKIILHNIPKCDDVNYMIISLKSLGIKINKIKNKLNSYEIEGFNINLLNNKKIELFIGNAGTVIRPLLSMLSLVKSNIKLIGDDRMKERPINHLVDALRSGGAKIKYIIKDKYPPVELFGGYIGGNITLNGNISSQFLSSILMMAPLAKKNTSIIIEDNLVSKPYIDITLNIMKKFGIKIYNNNYKFFYIEGNRKYISPKEIYIEGDASSASYFLAAGAIKNGPVKVIGINKNSIQGDIKFANILENMGANIIWGDNFIESSSNKLFSIDIDANDIPDVAMTIAIVSLFVNNKNKSIIRNIYNWRVKESDRLNAMSNELKKIGAEIIEGKDYISIIPPIKFKSAYINTYNDHRIAMCFSLIPLSGVNITINNYKCVNKTFPDYFDTFKKIII
SIO_010081: NARPIN1_RS00035
subclass of: SO_0000673
so part of: NARPIN1_RS00035
location: complement(9289..10578)
location: region:9289-10578:-1
so has part: feature:9289-10578:-1:exon

WP_130579027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9289-10578:-1:exon

NARPIN1_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: serS
locus tag: NARPIN1_RS00040
old locus tag: NARPIN1_00090
so part of: sequence
location: complement(10702..11970)
location: region:10702-11970:-1
so has part: feature:10702-11970:-1:exon
subclass of: SO_0000010

position:10702:-1
position: 10702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11970:-1
position: 11970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10702-11970:-1:exon

NARPIN1_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: serS
locus tag: NARPIN1_RS00040
old locus tag: NARPIN1_00090
EC number: 6.1.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070293.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine--tRNA ligase
translation: MIDLKLIKKNIYLYINKFKNRGCNINIKYLSKIDDERKKLKFKLNNSIFNKNKLSKLLYLYKNNSNINNLYKNINNINIKINLLKEKIKNLNYEINNILYEIPNILSNDVPSGKNSKNIDVYYWGEKRKFNFNIKSYITIGKLNNYIDFNSSSKISGKKFIIMKNNFSRIYRALSQFMLDIHIKNHGYEEIYVPLIVNNESLYGSGQLPKFKKDLFYLNNFNNNKLTHALIPTSEVPLVNIMRNTILNENKLPIKFVSNSSCFRSEVGSYGSNSKGLIRLHQFDKVEMVQFVKPNDSFNSLESLTNNAEYILQLLNLHYRKVLLSANNTSFSSCKTYDLEVWFPYENKYIEVSSCSNTSDFQSRRILARYKTLDNKINLIHILNGSGLAIGRTMAALIENYQEKDMNIKIPKILLPYMKDRL
SIO_010081: NARPIN1_RS00040
subclass of: SO_0000673
so part of: NARPIN1_RS00040
location: complement(10702..11970)
location: region:10702-11970:-1
so has part: feature:10702-11970:-1:exon

WP_130579029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10702-11970:-1:exon

NARPIN1_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: infA
locus tag: NARPIN1_RS00045
old locus tag: NARPIN1_00100
so part of: sequence
location: 12110..12328
location: region:12110-12328:1
so has part: feature:12110-12328:1:exon
subclass of: SO_0000010

position:12110:1
position: 12110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12328:1
position: 12328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12110-12328:1:exon

NARPIN1_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: infA
locus tag: NARPIN1_RS00045
old locus tag: NARPIN1_00100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008938619.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-1
translation: MNKKNISEFYGVVINTLPNTMFKVKLNNGNIIIAYISGKIRKNYIKILNGDKVIVELTPYDLKKGRIIFRSK
SIO_010081: NARPIN1_RS00045
subclass of: SO_0000673
so part of: NARPIN1_RS00045
location: 12110..12328
location: region:12110-12328:1
so has part: feature:12110-12328:1:exon

WP_130579031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12110-12328:1:exon

NARPIN1_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rsmH
locus tag: NARPIN1_RS00050
old locus tag: NARPIN1_00110
so part of: sequence
location: 12339..13268
location: region:12339-13268:1
so has part: feature:12339-13268:1:exon
subclass of: SO_0000010

position:12339:1
position: 12339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13268:1
position: 13268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12339-13268:1:exon

NARPIN1_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rsmH
locus tag: NARPIN1_RS00050
old locus tag: NARPIN1_00110
EC number: 2.1.1.199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672532.1
GO function: GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
translation: MINHIPVMLDEVIENLNIIKDGIYIDCTFGCGGHSMGILKKLGKNGKLISIDKDIESKTFSNKITDNRFIFINDNFSNINKYLLNFNLVGKINGILLDLGLSRNQISDSTRGFSFLNNGPLDMRMNKTKGLKAYDFINNESEQVIYNVLKKFGEDKNSKKIARNIIINRNKKKILKTFDLKKIILNSSNNIKSLARCFQAIRIYINNEIKELNCILNLVPNILCFNGILSIITFHSIEDKIVKNFFKISNEEHIFLNKIPITNIEYINIKNKLIKMIEINKIKPSLNEIKNNNSSRSAILRVFKKINKF
SIO_010081: NARPIN1_RS00050
subclass of: SO_0000673
so part of: NARPIN1_RS00050
location: 12339..13268
location: region:12339-13268:1
so has part: feature:12339-13268:1:exon

WP_232021812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12339-13268:1:exon

NARPIN1_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00055
old locus tag: NARPIN1_00120
so part of: sequence
location: 13272..14747
location: region:13272-14747:1
so has part: feature:13272-14747:1:exon
subclass of: SO_0000010

position:13272:1
position: 13272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14747:1
position: 14747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13272-14747:1:exon

NARPIN1_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00055
old locus tag: NARPIN1_00120
EC number: 6.3.2.13
inference: COORDINATES: protein motif:HMM:NF001126.0
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
translation: MILNYLLKPWITKNVPNINILNLTLNSKNIKNNSLFFSINGYLEKGSKYIQESINNGSIAIIIETENIYEHGKIINNKIPIIFFYKLKIFISEISGRFYNNPSNKLNLIGITGTNGKTTVSYISSQLINLINKYNKSAIIGTLGNGIIPNLIETKNTTDSPIDLQETLYKFYKNNIDTVFLEVSSHSILQNRIKNLKFKYTVFTNISHEHLDFHKNMFSYKKSKYKLFNEYKVINSIINVDNKFGKKISNKIKCTSVSLFKKIYIKCRSIYVNIKKIKFIKYKSYLEIIINNIKYNILLNFIGYFNVNNFIISLVTLIELGYKVNDIIKVSSLINLPPGRMEIIKFNKIDIIIDYAHTPDAIINILLTIRKICIGKIWCIFGCGGNKDKLKRPIMGKLAYKYSDYVILTSDNTKNENINDIINDIIKYINYKNNINIIIDREKAIKFSICNSNKYDIILILGKGHEKFQIIGNDLFNFSDKEIVLKLINKL
SIO_010081: NARPIN1_RS00055
subclass of: SO_0000673
so part of: NARPIN1_RS00055
location: 13272..14747
location: region:13272-14747:1
so has part: feature:13272-14747:1:exon

WP_130579033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13272-14747:1:exon

NARPIN1_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: murF
locus tag: NARPIN1_RS00060
old locus tag: NARPIN1_00130
so part of: sequence
location: 14748..16121
location: region:14748-16121:1
so has part: feature:14748-16121:1:exon
subclass of: SO_0000010

position:14748:1
position: 14748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16121:1
position: 16121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14748-16121:1:exon

NARPIN1_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: murF
locus tag: NARPIN1_RS00060
old locus tag: NARPIN1_00130
inference: COORDINATES: protein motif:HMM:TIGR01143.1
GO function: GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
translation: MINCTLKEISNIVNGKLIGKNKIINFISINSKNIKNKCLFIAFKGINFDSHIFVEDSIKNGAIAILVSKYFVNISIPQIIVNNVNNSFFSIAKFIRKKSNSYIIAITGSCGKTSIKEMTFCILKNIRKSYLTNKNENNIIGISLTLCNIEYYNMFVILEVGTDGLNQINNLIDIIEPNIVLISNLFISHFSKLNNYYNLIRAKGEILEKLSLCNRVILNFDSNNWNYWKFISFNKIPLFFSLNKLNNVDFYSENIITYNFKSSFILNSPIGKIKINLNVPGINNIYNSIAASAISILLGSNLNNIQKSLFKFKSINNRLKPIFISKNKIILDDTYNANLGSFISSSNLLSNINGYKVIIIADILELGNAEVFLHKRMGKIINNLNIDKVLSIGKLSYYITLNCKGEHFYNINNLIERIVFLIKKYNNIVILIKGSRKNRLDELIKILINKKNDNIIN
SIO_010081: NARPIN1_RS00060
subclass of: SO_0000673
so part of: NARPIN1_RS00060
location: 14748..16121
location: region:14748-16121:1
so has part: feature:14748-16121:1:exon

WP_130579036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14748-16121:1:exon

NARPIN1_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: mraY
locus tag: NARPIN1_RS00065
old locus tag: NARPIN1_00140
so part of: sequence
location: 16217..17167
location: region:16217-17167:1
so has part: feature:16217-17167:1:exon
subclass of: SO_0000010

position:16217:1
position: 16217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17167:1
position: 17167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16217-17167:1:exon

NARPIN1_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: mraY
locus tag: NARPIN1_RS00065
old locus tag: NARPIN1_00140
EC number: 2.7.8.13
inference: COORDINATES: protein motif:HMM:TIGR00445.1
GO function: GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospho-N-acetylmuramoyl-pentapeptide- transferase
translation: MYLFKKFNLKQKNRLNSFHVEKCNTFTMGGLIILLSSLLSIILWSDIYNIYTLYFIIFLISYGIIGFIDDYIKIYNKYYCGFKILEKYFIQSILTLILILFLYKTENILFIDRIFIPFLKKKNIYINKFIYFLLRYFTLMGAINSVNITDGLDGLAIISIILSLSTSIIISIIYSNEILSNIFNTLYIKNAYEIINLSSAIIGSSLGFLWFNSYPSYIFMGDTGSLSLGGILGLIFILLNSELLLILSGGIFVIELLSIILQIISYKIFKKRIYLMAPIHHHYEIKGVHESKIVFRFSIISFIFNLLCLLIIFIRK
SIO_010081: NARPIN1_RS00065
subclass of: SO_0000673
so part of: NARPIN1_RS00065
location: 16217..17167
location: region:16217-17167:1
so has part: feature:16217-17167:1:exon

WP_232021815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16217-17167:1:exon

NARPIN1_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: murD
locus tag: NARPIN1_RS00070
old locus tag: NARPIN1_00150
so part of: sequence
location: 17171..18496
location: region:17171-18496:1
so has part: feature:17171-18496:1:exon
subclass of: SO_0000010

position:17171:1
position: 17171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18496:1
position: 18496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17171-18496:1:exon

NARPIN1_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: murD
locus tag: NARPIN1_RS00070
old locus tag: NARPIN1_00150
EC number: 6.3.2.9
inference: COORDINATES: protein motif:HMM:TIGR01087.1
GO function: GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
translation: MFKNKNIFIIGSGITGISCINYLLKKECNLTLIDTRLNPPNLNLIPDNINTFFGKNVNFNMLLKSDLVVISPGFDYKLINNNILNKINITSDIELFCKEKPKSKIIAITGTNGKSTVSTLIFKILKNNNYLVYLGGNIGNPVLNSLNIDYDFYVFELSSFQLEILNNLKSFSSSILNIGFDHLDRHINIKNYINSKLKIFNNSYYCVINIDDNLSYPNKINLNSKYEFFGINSGNYHLKFIKDKIYLMYKNDLIIDSSKLKIFGIHNYINVLSSLSCIKYINLNFNKVINTIKKFKPLNHRLNLILNINNITWINDSKSTNISSTISAINSIKFYSTIHLIIGGYRKNIDFNLLKSFLKNKNIKIYCFGIDGKYISNLFNKKSIYYYDLESIVYEIYNKVKINDVVLFSPACSSIDNYNNYIDRGNHFIKIVNKLYKINDN
SIO_010081: NARPIN1_RS00070
subclass of: SO_0000673
so part of: NARPIN1_RS00070
location: 17171..18496
location: region:17171-18496:1
so has part: feature:17171-18496:1:exon

WP_130579040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17171-18496:1:exon

NARPIN1_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: murG
locus tag: NARPIN1_RS00075
old locus tag: NARPIN1_00160
so part of: sequence
location: 18486..19550
location: region:18486-19550:1
so has part: feature:18486-19550:1:exon
subclass of: SO_0000010

position:18486:1
position: 18486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19550:1
position: 19550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18486-19550:1:exon

NARPIN1_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: murG
locus tag: NARPIN1_RS00075
old locus tag: NARPIN1_00160
EC number: 2.4.1.227
inference: COORDINATES: protein motif:HMM:TIGR01133.1
GO function: GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
translation: MITKKNIIIATGGTGGHVISGICISNYLIYLKNNVTWVGSKNRMESYLISDNNINIDYISILNINTKSFFDKIKFYYSLLKSIYESCKIISYRKPDIIIGMGGYISIPVCIAGWIKNIPIIIHEQNCKIGLSNKILYFISKKFLSGFNLKNKNYIYVGNPVRKNIINISKPEIRLKNRKGPIRILILGGSQGSYFINKNIPLVIKKLNNVLIWHICGKNNYNFVFDIYNKLLCYNKVYLINDFILDIYKAYYWSDLIICRSGALTISEILCVGLPSIIIPFIGKDKHQYYNSLFLDKIGVTKIFNENEFDIDLIYNYISNLDRNKLLELSIRCRKYYNFNSIENIIKEIYNLFI
SIO_010081: NARPIN1_RS00075
subclass of: SO_0000673
so part of: NARPIN1_RS00075
location: 18486..19550
location: region:18486-19550:1
so has part: feature:18486-19550:1:exon

WP_130579042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18486-19550:1:exon

NARPIN1_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: murC
locus tag: NARPIN1_RS00080
old locus tag: NARPIN1_00170
so part of: sequence
location: 19556..20983
location: region:19556-20983:1
so has part: feature:19556-20983:1:exon
subclass of: SO_0000010

position:19556:1
position: 19556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20983:1
position: 20983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19556-20983:1:exon

NARPIN1_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: murC
locus tag: NARPIN1_RS00080
old locus tag: NARPIN1_00170
EC number: 6.3.2.8
inference: COORDINATES: protein motif:HMM:TIGR01082.1
GO function: GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate--L-alanine ligase
translation: MNNKNILDLNNIKKIHFIGIGGICISGIAKIFLKKGYIITGSDIIKNNIIKDLDNIGIKIYIGHNKNNIYNSDIIIFSSAIKPDNVEILEAINLNIPILSRGEILNKLTKNYYSICIAGSHGKTTITSIISFIFINSGYNITFLSGGILKNFNSNYNLGNSKYFVIESDESDSTFLKLNPSVSIISNIDNDHLIFYNNDFNNLKNSFIKFINNVPKNGLSIICIDNKILKDILYNNNFVCKIITYGFDDSADVVITEYFQYNFFSKFLLKSNKYKDFNFSIKINYLPGKYNALNITASVILTILEGIDHKLVIKSLLDFKGINRRFEILKYKFINKNLYNKKIFLISDYGHHPSEINSVIQNIRLGWSDYKIIMIFQPHRYTRTNSLLFDFIKILIKVDYLILLDIFSAGEDNLYNISSKNIFLKIKLYKKNNIFYLKNINNISNILNKLITYKNIILIQGAGNINDIILNNLNL
SIO_010081: NARPIN1_RS00080
subclass of: SO_0000673
so part of: NARPIN1_RS00080
location: 19556..20983
location: region:19556-20983:1
so has part: feature:19556-20983:1:exon

WP_130579044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19556-20983:1:exon

NARPIN1_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: secA
locus tag: NARPIN1_RS00085
old locus tag: NARPIN1_00180
so part of: sequence
location: 21001..23514
location: region:21001-23514:1
so has part: feature:21001-23514:1:exon
subclass of: SO_0000010

position:21001:1
position: 21001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23514:1
position: 23514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21001-23514:1:exon

NARPIN1_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: secA
locus tag: NARPIN1_RS00085
old locus tag: NARPIN1_00180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013516481.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecA
translation: MFNYFSKYINKYKNQHILNSIKKKVEIINFISKDIEKLSDKELSNKTNEFIFRLNKGKDIDSILFESFAVVKESINRIFGIKLFDVQIIGGIVLHNKCIAEMSTGEGKTLTSTLPAYFNSLYKKGVHIVTMNDYLAKRDAENNIPLFKFLGITVGINLSNSSFEEKKKSYLCDITYGTNNEYCFDYLRDNLVMNYNDKIQRSLNYAIIDEIDSILIDEARTPLIISDQNKNNSSLYLKINSLIKYLINNDIYFEKDKYFILDLKFKQITLTENGFKLIEKLMINLNYIKNENLLYLPENIILVHHFIISLKAHLLFKINIDYIIKDNKVIIVDENTGRAIEKRRWSDGLHQAIEAKENLEIQNESYNLTSITFQSYFKLYNKLSGMTGTAYSEKEEFKYIYNLDTIVIPTNKLIIRKDFPDLIFLTEKDKIKAIINDIIKCHNKNQPVLVGTISIEKSEFISNELKKIGIKHNILNAKYNEAEAEIISQAGKPGSITIATNMAGRGTDIILGGNFNNEIKNLKNKDISIINKIKNNWKLNNNIVIKSGGLHIIGTERHESRRIDNQLIGRSGRQGDPGSSKFYLSMEDQLIKMFISDKMLDLISKLDFSKLEHPWIDILIRNSQKKIENRNFNIRKQLIMYDDIYNNQRNIIYKIRDYFLSIDDIYNIVKLFIDEIINNILLKFIPINSNKKKWDIEKLNNFLIKDFNFLDLLLNNIDIYKINNDCLIRDLIYKKIIENYNNFLKYKNILSTIKSSIFIKKLDLLWREHLNNLDNLHKGIYLRSYAQKNPRQEFKLESFNLFNNMLFSWKFESLVVLNKFIFNNKSSLDENLINNIY
SIO_010081: NARPIN1_RS00085
subclass of: SO_0000673
so part of: NARPIN1_RS00085
location: 21001..23514
location: region:21001-23514:1
so has part: feature:21001-23514:1:exon

WP_130579047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21001-23514:1:exon

NARPIN1_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00090
old locus tag: NARPIN1_00190
so part of: sequence
location: 23518..25005
location: region:23518-25005:1
so has part: feature:23518-25005:1:exon
subclass of: SO_0000010

position:23518:1
position: 23518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25005:1
position: 25005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23518-25005:1:exon

NARPIN1_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00090
old locus tag: NARPIN1_00190
inference: COORDINATES: protein motif:HMM:NF012562.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKINILNKLRLSYKKIINNNSEYIFNTNKKKNNFSITFNKNILIDFSKNIINNNIINLLVKLFNKFNFLNLKNNNYLSYKEIFYLDTILINKINFLYNKLIYNSFNIIENIVNIGHLKYKYEFDFISNVLKEYKVNNYKFYYLSYLNSDIINIIKNFNLKKTIFIISYDTYEDYKLIEIINFIINRINLEIDNINNYINTNIIILTSLNLKNRIFNINTNNIIYINTNININTNSIYYISMILLIYLGNLNFNNFIKGIKNINNNFLYEKKIYNNISVLLSLIDIWYLIFFKFRINLMFLDYYLNNFINYYINLHLFYKNISFYKNIILGSSDIYIQNFLYKTLLNNKNLNCEFIFFCKNNNFLFEYNHNNFISESFYRSRSMFFINNNINNIKNFLFNKKRKNYEFNNNINIIPNNFILLNKLNPNNLGILIYIYKYRIFLKNILISNIKNEKLNFNYLDNIIDILDIKLENQETNYDTSTNELINFYKKNRYI
SIO_010081: NARPIN1_RS00090
subclass of: SO_0000673
so part of: NARPIN1_RS00090
location: 23518..25005
location: region:23518-25005:1
so has part: feature:23518-25005:1:exon

WP_130579049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23518-25005:1:exon

NARPIN1_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rho
locus tag: NARPIN1_RS00095
old locus tag: NARPIN1_00200
so part of: sequence
location: complement(25006..26268)
location: region:25006-26268:-1
so has part: feature:25006-26268:-1:exon
subclass of: SO_0000010

position:25006:-1
position: 25006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26268:-1
position: 26268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25006-26268:-1:exon

NARPIN1_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rho
locus tag: NARPIN1_RS00095
old locus tag: NARPIN1_00200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1
GO function: GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor Rho
translation: MNLTKLKNKSISELINIGEKIELENLSKMHKQDIIFNILKQHSKNGEDIFGDGILEIMQDGFGFLRSVNSSYLAGPDDIYISPSQIKKFNLKTGDTISGKIRPPKDGEKYFALLKIDEINFDKPENYYNKILFENLTPLHANSRLKMEKGNNSIEDITTRILDLSAPIGKGQRGLIVAPPKAGKTILLQNIANSILLNHNDCILIVLLIDERPEEVTEMQKIIGNNNVISSTFDEPYSRHVQVSEMVIERAKRLVEHKKDVIILLDSITRLTRAYNSIIPSSGRVLTGGIDVNALNRPKKFFGAARNMYEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKISEKRIFPAIDYNRSGTRKEELLIDSNELKKMWILRKILNSMNEVEVIEFLINKLSITKTNNEFFEMMKKI
SIO_010081: NARPIN1_RS00095
subclass of: SO_0000673
so part of: NARPIN1_RS00095
location: complement(25006..26268)
location: region:25006-26268:-1
so has part: feature:25006-26268:-1:exon

WP_130579051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25006-26268:-1:exon

NARPIN1_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00100
old locus tag: NARPIN1_00210
so part of: sequence
location: 26287..26523
location: region:26287-26523:1
so has part: feature:26287-26523:1:exon
subclass of: SO_0000010

position:26287:1
position: 26287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26523:1
position: 26523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26287-26523:1:exon

NARPIN1_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00100
old locus tag: NARPIN1_00210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNNINEIKFLISKRHIDILKKSFNILNIDENKFDISILSDNISLSQKELLSLININKNTHNSEKILSEIFSKFCIGK
SIO_010081: NARPIN1_RS00100
subclass of: SO_0000673
so part of: NARPIN1_RS00100
location: 26287..26523
location: region:26287-26523:1
so has part: feature:26287-26523:1:exon

WP_130579053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26287-26523:1:exon

NARPIN1_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00105
old locus tag: NARPIN1_00220
so part of: sequence
location: complement(26528..26599)
location: region:26528-26599:-1
so has part: feature:26528-26599:-1:exon
subclass of: SO_0000663

position:26528:-1
position: 26528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26599:-1
position: 26599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26528-26599:-1:exon

NARPIN1_RS00105
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00105
old locus tag: NARPIN1_00220
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(26565..26567),aa:Trp,seq:cca)
SIO_010081: NARPIN1_RS00105
subclass of: SO_0000673
so part of: NARPIN1_RS00105
location: complement(26528..26599)
location: region:26528-26599:-1
so has part: feature:26528-26599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26528-26599:-1:exon

NARPIN1_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rrf
locus tag: NARPIN1_RS00110
old locus tag: NARPIN1_00230
so part of: sequence
location: complement(26612..26726)
location: region:26612-26726:-1
so has part: feature:26612-26726:-1:exon
subclass of: SO_0000573

position:26612:-1
position: 26612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26726:-1
position: 26726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26612-26726:-1:exon

NARPIN1_RS00110
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1971488
gene: rrf
locus tag: NARPIN1_RS00110
old locus tag: NARPIN1_00230
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: NARPIN1_RS00110
subclass of: SO_0000673
so part of: NARPIN1_RS00110
location: complement(26612..26726)
location: region:26612-26726:-1
so has part: feature:26612-26726:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26612-26726:-1:exon

NARPIN1_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00115
old locus tag: NARPIN1_00240
so part of: sequence
location: complement(26777..29681)
location: region:26777-29681:-1
so has part: feature:26777-29681:-1:exon
subclass of: SO_0000573

position:26777:-1
position: 26777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29681:-1
position: 29681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26777-29681:-1:exon

NARPIN1_RS00115
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1971488
locus tag: NARPIN1_RS00115
old locus tag: NARPIN1_00240
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: NARPIN1_RS00115
subclass of: SO_0000673
so part of: NARPIN1_RS00115
location: complement(26777..29681)
location: region:26777-29681:-1
so has part: feature:26777-29681:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26777-29681:-1:exon

NARPIN1_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00120
old locus tag: NARPIN1_00250
so part of: sequence
location: complement(29697..29768)
location: region:29697-29768:-1
so has part: feature:29697-29768:-1:exon
subclass of: SO_0000663

position:29697:-1
position: 29697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29768:-1
position: 29768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29697-29768:-1:exon

NARPIN1_RS00120
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00120
old locus tag: NARPIN1_00250
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(29733..29735),aa:Glu,seq:ttc)
SIO_010081: NARPIN1_RS00120
subclass of: SO_0000673
so part of: NARPIN1_RS00120
location: complement(29697..29768)
location: region:29697-29768:-1
so has part: feature:29697-29768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29697-29768:-1:exon

NARPIN1_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: groL
locus tag: NARPIN1_RS00125
old locus tag: NARPIN1_00260
so part of: sequence
location: complement(29779..31419)
location: region:29779-31419:-1
so has part: feature:29779-31419:-1:exon
subclass of: SO_0000010

position:29779:-1
position: 29779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31419:-1
position: 31419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29779-31419:-1:exon

NARPIN1_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: groL
locus tag: NARPIN1_RS00125
old locus tag: NARPIN1_00260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012771784.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chaperonin GroEL
translation: MTAKDVKFGNDARTKMLKGVNILADAVKVTLGPKGRNVVLDKSFGAPIITKDGVSVAREIELEDKFENMGAQMVKEVASKANDSAGDGTTTATLLAQSIINEGLKAVAAGMNPMDIKRGIDKAVIQAVNVLKSISVACSDSKSIEQVGTISANSDEKVGKLIAEAMEKVGKEGVITVEEGSGLEDELDVVEGMQFDRGYLSPYFINKPESGVVELENPFILLVDKKISNIRELLPILENVAKSNKPILIIAEDIEGEALATLVVNTMRGIVKAVAVKAPGFGDRRKAMLEDIAILTSGSVISEDIGLELEKTKINDMGQAKKIIVNKDTTTIIDGIGSKISIEKRVSQISKQKEDSTSDYDKEKLQERIAKLAGGVAVIKVGAATEIEMKEKKSRVEDALNATRAAVEEGVVAGGGVALIRVANSIKNLKGDNEDQNVGIKVAIKSMETPLKQIVSNAGEESSVIANNVKLKSGNYGYNASTEKYGDMIDMGILDPTKVTRSALQYAASIAGLMITTECMITELLKDDNKQDINSSNMNNIGGNMM
SIO_010081: NARPIN1_RS00125
subclass of: SO_0000673
so part of: NARPIN1_RS00125
location: complement(29779..31419)
location: region:29779-31419:-1
so has part: feature:29779-31419:-1:exon

WP_130579431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29779-31419:-1:exon

NARPIN1_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00130
old locus tag: NARPIN1_00270
so part of: sequence
location: complement(31457..31747)
location: region:31457-31747:-1
so has part: feature:31457-31747:-1:exon
subclass of: SO_0000010

position:31457:-1
position: 31457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31747:-1
position: 31747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31457-31747:-1:exon

NARPIN1_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00130
old locus tag: NARPIN1_00270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006814338.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: co-chaperone GroES
translation: MKIRPLYDKVVLKRLDIESKSSGGIVLTGSAANKSNRGKVLAIGSGRVLENGEIKSLDVKVNDLVIFNDGYGIKSEKIDGEEILILSESDILAIIE
SIO_010081: NARPIN1_RS00130
subclass of: SO_0000673
so part of: NARPIN1_RS00130
location: complement(31457..31747)
location: region:31457-31747:-1
so has part: feature:31457-31747:-1:exon

WP_130579055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31457-31747:-1:exon

NARPIN1_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00135
old locus tag: NARPIN1_00280
so part of: sequence
location: 31948..32020
location: region:31948-32020:1
so has part: feature:31948-32020:1:exon
subclass of: SO_0000663

position:31948:1
position: 31948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32020:1
position: 32020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31948-32020:1:exon

NARPIN1_RS00135
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00135
old locus tag: NARPIN1_00280
product: tRNA-Phe
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:31981..31983,aa:Phe,seq:gaa)
SIO_010081: NARPIN1_RS00135
subclass of: SO_0000673
so part of: NARPIN1_RS00135
location: 31948..32020
location: region:31948-32020:1
so has part: feature:31948-32020:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31948-32020:1:exon

NARPIN1_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: dnaB
locus tag: NARPIN1_RS00140
old locus tag: NARPIN1_00290
so part of: sequence
location: 32058..33437
location: region:32058-33437:1
so has part: feature:32058-33437:1:exon
subclass of: SO_0000010

position:32058:1
position: 32058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33437:1
position: 33437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32058-33437:1:exon

NARPIN1_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: dnaB
locus tag: NARPIN1_RS00140
old locus tag: NARPIN1_00290
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013087871.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replicative DNA helicase
translation: MKKNISNFKNFENINTKELKILPHSIESEQSVLGGLMLNNNKWDEIIEYINENDFFNNKNKIIFNEMKYLIDIKQPIDLITISESLEKKNLLNLIGGFSYLAELSKNIPSIKNIVSYLEIIKEKSIIREIILISYEIINLCYNPQKKYSKEILDIVESKIFKLSEKRNIKFNNPKNISLILNNTINKIKEYSSNNNKITGISTGYHDLDEKTLGFQNSDLIIIAARPSMGKTTFAINLCENIILNNNKPVLIFSLEMSEEQIIMKILSSMSRINQINIRTGQLNIDNWNKINNIVNILLNKKNLYIDDSSTITPTELKSKSRKIYKENDGLSLIMIDYLQLIKVSSSFENRTLEIAEISRSLKSLAKELNIPIIALSQLNRSLEQRYDKRPINSDLRESGSIEQDADLIMFIYRDEIYNENSNLKGIAEIIISKQRNGPIGSIKLLFNSKISKFDNYYI
SIO_010081: NARPIN1_RS00140
subclass of: SO_0000673
so part of: NARPIN1_RS00140
location: 32058..33437
location: region:32058-33437:1
so has part: feature:32058-33437:1:exon

WP_130579057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32058-33437:1:exon

NARPIN1_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00145
old locus tag: NARPIN1_00300
so part of: sequence
location: 33545..33964
location: region:33545-33964:1
so has part: feature:33545-33964:1:exon
subclass of: SO_0000010

position:33545:1
position: 33545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33964:1
position: 33964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33545-33964:1:exon

NARPIN1_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00145
old locus tag: NARPIN1_00300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070211.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix DNA-binding protein
translation: MEKIIDILNIVDSISRIYNKTKKEINKKLIYEGLSISKMKILKLINNKKISATDIKNYMGFSSRTIVTVLDSLERDGLLNRKQSNQDRRIKYVCITDKGIVKLKIAEEKNKSILNELFSSFSNNELEKFSEICSYIEKK
SIO_010081: NARPIN1_RS00145
subclass of: SO_0000673
so part of: NARPIN1_RS00145
location: 33545..33964
location: region:33545-33964:1
so has part: feature:33545-33964:1:exon

WP_130579059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33545-33964:1:exon

NARPIN1_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00155
old locus tag: NARPIN1_00320
so part of: sequence
location: complement(35400..35473)
location: region:35400-35473:-1
so has part: feature:35400-35473:-1:exon
subclass of: SO_0000663

position:35400:-1
position: 35400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35473:-1
position: 35473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35400-35473:-1:exon

NARPIN1_RS00155
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00155
old locus tag: NARPIN1_00320
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(35437..35439),aa:Ile,seq:gat)
SIO_010081: NARPIN1_RS00155
subclass of: SO_0000673
so part of: NARPIN1_RS00155
location: complement(35400..35473)
location: region:35400-35473:-1
so has part: feature:35400-35473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35400-35473:-1:exon

NARPIN1_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00160
old locus tag: NARPIN1_00330
so part of: sequence
location: complement(35518..37075)
location: region:35518-37075:-1
so has part: feature:35518-37075:-1:exon
subclass of: SO_0000573

position:35518:-1
position: 35518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37075:-1
position: 37075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35518-37075:-1:exon

NARPIN1_RS00160
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1971488
locus tag: NARPIN1_RS00160
old locus tag: NARPIN1_00330
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: NARPIN1_RS00160
subclass of: SO_0000673
so part of: NARPIN1_RS00160
location: complement(35518..37075)
location: region:35518-37075:-1
so has part: feature:35518-37075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35518-37075:-1:exon

NARPIN1_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00165
old locus tag: NARPIN1_00340
so part of: sequence
location: 37243..39183
location: region:37243-39183:1
so has part: feature:37243-39183:1:exon
subclass of: SO_0000010

position:37243:1
position: 37243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39183:1
position: 39183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37243-39183:1:exon

NARPIN1_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00165
old locus tag: NARPIN1_00340
inference: COORDINATES: protein motif:HMM:NF024754.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3'-5' exonuclease
translation: MNNNFLKFLNENQKKAVCSNSKNILVLAGAGSGKTMVIIYRIIWFILNKNINPNSILTITFTNKASDEINNRIKKFTNNNSINSGTFHSISYKILKIYHKYANLSNDFQIINNYDQLKIIKNIISLLKLNEKNYNCSYILKYINSNKENIIRENNIICKNNNDYILLEIYKKYQKLCNKLNLVDFSELLIRSYELLLNNKDILNKCINKFNNILIDEFQDINKIQYFLSKILINNDICNSSTIVGDNNQSIYGWRGSNINNMNNLLKDFSNVEIIYLNQNYRSTKNIIKVANSIISNNSSSVIYNKKLWTNNNYGNLINIYKANNEIEESKFISNFINKDFKSNLGNKNYAILYRNNYKSRIIEEYLIYNNLSYKIYGGLKFLDRQEIKNSISYIRLIDNTNDNIAYEKIVNFPPRRIGNKTLELIKNVSKENNISYWDSTIYIINNNKNFKKVCINSLINFVNLIKFIKKDIIDYDLPDQIYKIINYSGIYNFYKLNEYNNNLLFKTDNINELINSSKQFFDKNKNFNIKPNIKEFLSHLLLKLDYIENNNNNNIQLMTIHSSKGLEFDTVFISGMENGIFPSQESLIDNFILEEERRLFYVALTRAIKNIIITYSEYKYIYGKVVFFEPSKFLKEIPNKFIKII
SIO_010081: NARPIN1_RS00165
subclass of: SO_0000673
so part of: NARPIN1_RS00165
location: 37243..39183
location: region:37243-39183:1
so has part: feature:37243-39183:1:exon

WP_130579061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37243-39183:1:exon

NARPIN1_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00170
old locus tag: NARPIN1_00350
so part of: sequence
location: 39255..40061
location: region:39255-40061:1
so has part: feature:39255-40061:1:exon
subclass of: SO_0000010

position:39255:1
position: 39255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40061:1
position: 40061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39255-40061:1:exon

NARPIN1_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00170
old locus tag: NARPIN1_00350
inference: COORDINATES: protein motif:HMM:TIGR00099.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Cof-type HAD-IIB family hydrolase
translation: MYKAIISDLDGTLLNSNGLISDYTNNIIKLLNNTNIKLIIATGRHYIDVSNLINKNSISAFYITANGSVIHDYNNNLIYYAKLDSNVLLEIINNIYLNDDEIYTNIFCNDIWITNPESKLNRFYVKKYDINDIIKNNYILNNSCKIHFNSDNINALSNLKEFLNKNWKDYIEVNFSLPFCLEVNPKNVSKGNTLKFLLNKLNIELNNCISFGDGMNDYDMLSITGKSCLMKNSSNDLKNKLCNLEIIDSNDNDGVAKYIEKNILNMIS
SIO_010081: NARPIN1_RS00170
subclass of: SO_0000673
so part of: NARPIN1_RS00170
location: 39255..40061
location: region:39255-40061:1
so has part: feature:39255-40061:1:exon

WP_130579063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39255-40061:1:exon

NARPIN1_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: metG
locus tag: NARPIN1_RS00175
old locus tag: NARPIN1_00360
so part of: sequence
location: complement(40054..41673)
location: region:40054-41673:-1
so has part: feature:40054-41673:-1:exon
subclass of: SO_0000010

position:40054:-1
position: 40054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41673:-1
position: 41673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40054-41673:-1:exon

NARPIN1_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: metG
locus tag: NARPIN1_RS00175
old locus tag: NARPIN1_00360
EC number: 6.1.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011126737.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine--tRNA ligase
translation: MNNNKFLVTSAFPYSNGPIHLGHILENIQADIWVRYKKMNKENIYFICSDDSHGTPIMLKSKKLKINTLYYIKKMYFNHKNNFKKFSIDHDNYYLTHSSENKRVISNIFNILKNKNLIIEKKINQLFDDNNKIFLPDRFIIGSCPKCLTKNQYGDLCEYCGYKYNCIDLINPKSIISNSNLIIKETNHLFFNLPVFKNNLIFWINSINLQKSVLNKIHNCIDLGLNMWDISRDYPYFGFKIPNYNNKFFYVWIDALVGYISTFNNLYKFNNNIIENYWSINSNSKIYQFIGKDIIYFHLLLWPSILEGINFKKPDKIIVHGHLKINGNKMSKSNNNFISVEKYLEYLDSDLLRYYFSSKLSNNIEDINFDITNFVNKINSDIINKILNLASRNFKILETNFNSVLSNKIDDNIYNYFISKSNIIFNLYEKFEFNKIINNIIKLSNLANKYISDNKPWDFIINKKKKSHIICSTGLNLFKIIITYLKPIIPKISSYSEELLGIKLNLYNLDKPIKSFHRINKFILKFKKININYVNKIFN
SIO_010081: NARPIN1_RS00175
subclass of: SO_0000673
so part of: NARPIN1_RS00175
location: complement(40054..41673)
location: region:40054-41673:-1
so has part: feature:40054-41673:-1:exon

WP_130579065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40054-41673:-1:exon

NARPIN1_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: ssrA
locus tag: NARPIN1_RS00180
old locus tag: NARPIN1_00370
so part of: sequence
location: complement(41679..42036)
location: region:41679-42036:-1
so has part: feature:41679-42036:-1:exon
subclass of: SO_0000659

position:41679:-1
position: 41679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42036:-1
position: 42036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41679-42036:-1:exon

NARPIN1_RS00180
type: Transfer Messenger RNA
subclass of: SO_0000584
RO_0002162: 1971488
gene: ssrA
locus tag: NARPIN1_RS00180
old locus tag: NARPIN1_00370
product: transfer-messenger RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00023
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: NARPIN1_RS00180
subclass of: SO_0000673
so part of: NARPIN1_RS00180
location: complement(41679..42036)
location: region:41679-42036:-1
so has part: feature:41679-42036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41679-42036:-1:exon

NARPIN1_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00185
old locus tag: NARPIN1_00380
so part of: sequence
location: complement(42043..42480)
location: region:42043-42480:-1
so has part: feature:42043-42480:-1:exon
subclass of: SO_0000010

position:42043:-1
position: 42043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42480:-1
position: 42480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42043-42480:-1:exon

NARPIN1_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00185
old locus tag: NARPIN1_00380
inference: COORDINATES: protein motif:HMM:NF013804.2
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SsrA-binding protein
translation: MNIIHINNNKNSFYKYNIEDKMDIGLVLKGYEVKCIKNNKANFDKSYINIIKNEFFLLGSIFTIKDKNINSYNRKIKLLLNKKEILILLNKINSKNFIIKPISIFLSKTLYIKIKVGISKKIKKIDKRLYIKNKNSNFNINKYKS
SIO_010081: NARPIN1_RS00185
subclass of: SO_0000673
so part of: NARPIN1_RS00185
location: complement(42043..42480)
location: region:42043-42480:-1
so has part: feature:42043-42480:-1:exon

WP_130579067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42043-42480:-1:exon

NARPIN1_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00190
old locus tag: NARPIN1_00390
so part of: sequence
location: complement(42495..42812)
location: region:42495-42812:-1
so has part: feature:42495-42812:-1:exon
subclass of: SO_0000010

position:42495:-1
position: 42495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42812:-1
position: 42812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42495-42812:-1:exon

NARPIN1_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00190
old locus tag: NARPIN1_00390
inference: COORDINATES: protein motif:HMM:NF016258.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamE
translation: MKNNILYISLIIFEFLKYKNIYSNNNSYGYIIINSQLNKLKIGLDNKEKIIEILGNPSIIDPFTNKIWFYINYKVKNNKIVDLNKIVLHFNEEDILIKIDNNNSN
SIO_010081: NARPIN1_RS00190
subclass of: SO_0000673
so part of: NARPIN1_RS00190
location: complement(42495..42812)
location: region:42495-42812:-1
so has part: feature:42495-42812:-1:exon

WP_130579069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42495-42812:-1:exon

NARPIN1_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: grpE
locus tag: NARPIN1_RS00195
old locus tag: NARPIN1_00400
so part of: sequence
location: 42957..43574
location: region:42957-43574:1
so has part: feature:42957-43574:1:exon
subclass of: SO_0000010

position:42957:1
position: 42957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43574:1
position: 43574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42957-43574:1:exon

NARPIN1_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: grpE
locus tag: NARPIN1_RS00195
old locus tag: NARPIN1_00400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013516853.1
GO function: GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide exchange factor GrpE
translation: MNDNKDILEEEIDINKKDDKNLDNLINEYINNINNLNNVIENYKIELDNLKKEKIDNELRYQAELSNIDKRNKIEIEKIYKFSLENFMSELIIVIDNLERAINVNVDKINDDIIEGLNLTLKSLVKITNKFGLSSIDSINVPFDPSIHQAILTTFNKKYEPNYVIDIIQKGYILNERLIRPAMVQVSCNSENNIEKNMNIDNKLE
SIO_010081: NARPIN1_RS00195
subclass of: SO_0000673
so part of: NARPIN1_RS00195
location: 42957..43574
location: region:42957-43574:1
so has part: feature:42957-43574:1:exon

WP_232021813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42957-43574:1:exon

NARPIN1_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: ung
locus tag: NARPIN1_RS00200
old locus tag: NARPIN1_00410
so part of: sequence
location: complement(43566..44225)
location: region:43566-44225:-1
so has part: feature:43566-44225:-1:exon
subclass of: SO_0000010

position:43566:-1
position: 43566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44225:-1
position: 44225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43566-44225:-1:exon

NARPIN1_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: ung
locus tag: NARPIN1_RS00200
old locus tag: NARPIN1_00410
EC number: 3.2.2.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013087816.1
GO function: GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO process: GO:0006284 - base-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-DNA glycosylase
translation: MNWKDIINKEKNKNYFIKMNNFIYKEIKNNKIIYPKINNIFNSFKLTPFDITKIVIIGQDPYPNINQANGLSFSVNLNSKIPKSLNNIFIEIKNNINNFKYPKHGYLKYWSNQGILLLNRILTVEKNKPLSHSNIGWEIFTENILKIINNNKNGIIFVLWGNYSKKIEYLIDKKKHFILKASHPSPLSANKGFFGCKHFIKINNILKNQNKKIIDWNLF
SIO_010081: NARPIN1_RS00200
subclass of: SO_0000673
so part of: NARPIN1_RS00200
location: complement(43566..44225)
location: region:43566-44225:-1
so has part: feature:43566-44225:-1:exon

WP_130579073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43566-44225:-1:exon

NARPIN1_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: lepA
locus tag: NARPIN1_RS00205
old locus tag: NARPIN1_00420
so part of: sequence
location: 44271..46079
location: region:44271-46079:1
so has part: feature:44271-46079:1:exon
subclass of: SO_0000010

position:44271:1
position: 44271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46079:1
position: 46079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44271-46079:1:exon

NARPIN1_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: lepA
locus tag: NARPIN1_RS00205
old locus tag: NARPIN1_00420
EC number: 3.6.5.n1
inference: COORDINATES: protein motif:HMM:TIGR01393.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation elongation factor 4
translation: MNKNKLNFNIRNFCIIAHINHGKSTLSNKIIEYCNNNFYKKNIKSNEPLDNLEIEKKRGITIKSKNITLNFNYKNNLYKFNLIDTPGHADFYSEIIKIINVCNGALLVIDSTKGIQSQTIFNYNLAKDNNLNLIFVINKVDLKLSNTNKIIDDIKNYFNLNEFNYVLCSSKTGYGIDNLVEKIIKFISKPNILLTNNLEIIILDVKFNNYLGIILTVYIKSGYLIKGSKIFNKNNNIFLIIKLLGIFNINNDYIDILNSGDIGWISFTYKKIMNFYIGDTIYNYVNKYEKNNNISNNIESNIYCSLFTKEYNEFNKFEKSIVIFSLSDCSFKYNKEYSNLFGFGFKCGFISLLHMEVVIERLEKEFNLKLIYTFPNIEYKIYTKNNKIINIKNPSDIYKYNIKYISEPISICEIITPNKYMNNIVKLCLDKRGVKINILNYNNDNYKLIYYIPISEIINNFFDDIKSISNGYAYFNYKFSHFEKTKLFIIEIEINNYIINQLTCFVSENNIKSKILYINNKLSELIHRKQFDIVIKILLNKKVVSKKIIKQFRKDVISKCYGGDISRKKKLLDKQKKGKKKIKKNNTLNVKLDEIKSIFYIN
SIO_010081: NARPIN1_RS00205
subclass of: SO_0000673
so part of: NARPIN1_RS00205
location: 44271..46079
location: region:44271-46079:1
so has part: feature:44271-46079:1:exon

WP_130579075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44271-46079:1:exon

NARPIN1_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: lepB
locus tag: NARPIN1_RS00210
old locus tag: NARPIN1_00430
so part of: sequence
location: 46170..46919
location: region:46170-46919:1
so has part: feature:46170-46919:1:exon
subclass of: SO_0000010

position:46170:1
position: 46170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46919:1
position: 46919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46170-46919:1:exon

NARPIN1_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: lepB
locus tag: NARPIN1_RS00210
old locus tag: NARPIN1_00430
EC number: 3.4.21.89
inference: COORDINATES: protein motif:HMM:NF021981.2
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase I
translation: MSNFYLKIKNLFSYFKLTIYILFISFIFRFFLYETFYISSSSMFPNLLIGDFIITKKYTFNIINSLLKNRFSNNLNIKRGDIILFKFPLNKKMFFIKRVIGIPGDEIEYDFLNKKIKLYNKKLNLLDYKLNYLNLLNSNKFLNLYNEYNVFIDKTENINNKSYSIFINNLDKNEMNCLLLNNKDNVIRWIVPNNCYFVIGDNRNNSFDSRYWGFLDKKYILGKFIFKVFNFNINKILIFLKSKNFIKLI
SIO_010081: NARPIN1_RS00210
subclass of: SO_0000673
so part of: NARPIN1_RS00210
location: 46170..46919
location: region:46170-46919:1
so has part: feature:46170-46919:1:exon

WP_172597007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46170-46919:1:exon

NARPIN1_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rnc
locus tag: NARPIN1_RS00215
old locus tag: NARPIN1_00440
so part of: sequence
location: 46916..47608
location: region:46916-47608:1
so has part: feature:46916-47608:1:exon
subclass of: SO_0000010

position:46916:1
position: 46916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47608:1
position: 47608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46916-47608:1:exon

NARPIN1_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rnc
locus tag: NARPIN1_RS00215
old locus tag: NARPIN1_00440
EC number: 3.1.26.3
inference: COORDINATES: protein motif:HMM:TIGR02191.1
GO function: GO:0004525 - ribonuclease III activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease III
translation: MKFVELEDKLNYYFKNKDLLFQSLSHKSIGSFNNEKLEFLGDSVLNFIITTNIYNIFNDLNEGDMSYIRSNLIQSKNLIKIAKKLNIKNYIQFSSVNDKIDYFINYLLANSLEAIIGAIFLDGGIESVKKFIFSQFNENLNKLKNNRDLNKDFKTLLQELLQKLHFSLPIYDTVKIKNYKYNLKKFYILCKISNPKYIETNGIGLNKKQAEQIAAKKMLKLLNYNFNKNI
SIO_010081: NARPIN1_RS00215
subclass of: SO_0000673
so part of: NARPIN1_RS00215
location: 46916..47608
location: region:46916-47608:1
so has part: feature:46916-47608:1:exon

WP_130579079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46916-47608:1:exon

NARPIN1_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: aspS
locus tag: NARPIN1_RS00220
old locus tag: NARPIN1_00450
so part of: sequence
location: 47605..49278
location: region:47605-49278:1
so has part: feature:47605-49278:1:exon
subclass of: SO_0000010

position:47605:1
position: 47605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49278:1
position: 49278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47605-49278:1:exon

NARPIN1_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: aspS
locus tag: NARPIN1_RS00220
old locus tag: NARPIN1_00450
EC number: 6.1.1.12
inference: COORDINATES: protein motif:HMM:TIGR00459.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate--tRNA ligase
translation: MKSYYCKDINNLFINKKIILNGWIYNKKILKNIIFINLRDSSGEIQLVCYKNNINFDKISKLKCESCIKVCGFVKHKKLLFINKNIYNNFEIEIKYINLLCDSNSLPIDFNSNLSEYQKLKFRYLYLRNKKPSNLIKIKSEINWYVHKFMRKNNFLNIETPILSKRFIHEGSKNYIVSSRKYNNKYYSLSQSPQLFKQILMISGFDKYYQIAKCFRDEDLRSDRQPEFTQIDFEVSFKYENYIYNITEKLIKYIFKQILNINIDNKFKKITFKESINKFGTDKPDLRSLLEIIHINNLLNVDNLSYMFDIIHIPNGIYIKNINNYIINFNLNNNLFILNFNKFKYFLNYLNLNINNILYEKIIFYLNKNTININNDLILIYIIDKNLYSIEIISKIRTYIGIQLSVEKFSFIWITDFPMFKLNNGNIESMHHPFSSPKKNNINKINKLYINKNINSLLSRSYDLVINGYEVASGSVRINNRKTQELIFDLLNISKIDQKKYFGFFLDALSYGAPPHSGIAIGLDRLTMLITNINNIKDIIAFPKTSSAYDLLMDFPN
SIO_010081: NARPIN1_RS00220
subclass of: SO_0000673
so part of: NARPIN1_RS00220
location: 47605..49278
location: region:47605-49278:1
so has part: feature:47605-49278:1:exon

WP_130579081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47605-49278:1:exon

NARPIN1_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: ruvC
locus tag: NARPIN1_RS00225
old locus tag: NARPIN1_00460
so part of: sequence
location: 49284..49760
location: region:49284-49760:1
so has part: feature:49284-49760:1:exon
subclass of: SO_0000010

position:49284:1
position: 49284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49760:1
position: 49760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49284-49760:1:exon

NARPIN1_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: ruvC
locus tag: NARPIN1_RS00225
old locus tag: NARPIN1_00460
EC number: 3.1.21.10
inference: COORDINATES: protein motif:HMM:TIGR00228.1
GO function: GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: crossover junction endodeoxyribonuclease RuvC
translation: MKIILGVDPGSKITGYGFLELYKNEINYLFSGYIFLKDKNFFKRLNIIYKEMKLIIKKYNPNYFAIEKIFVGKNMDSAIKLSHARSAAILALNNFNIPIYEYTFSQVKKCLLKIDNNNTNIKNIILNRLKINNNNFKEDVFDALAIAITNFYDIKNFI
SIO_010081: NARPIN1_RS00225
subclass of: SO_0000673
so part of: NARPIN1_RS00225
location: 49284..49760
location: region:49284-49760:1
so has part: feature:49284-49760:1:exon

WP_130579083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49284-49760:1:exon

NARPIN1_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00230
old locus tag: NARPIN1_00470
so part of: sequence
location: 49772..50881
location: region:49772-50881:1
so has part: feature:49772-50881:1:exon
subclass of: SO_0000010

position:49772:1
position: 49772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50881:1
position: 50881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49772-50881:1:exon

NARPIN1_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00230
old locus tag: NARPIN1_00470
inference: COORDINATES: protein motif:HMM:NF039309.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidoglycan DD-metalloendopeptidase family protein
translation: MQRILKNNISFFIKKIYLLLDFINKYLFFIVNIIIILNLFIFSNIYMNKFNIKLKFNYFKINKINLNNLFNKKFNLYLKSKNKFNKIKFEFIDLNKNIYYLKNKNKFNNKKTYFLITYIKINNNFIKNLMNLGLKKNDINNIKNIVNKFINIKNLTKDSKFIIFSIFNESNKFKIDINKLICIKVINKNKKIYIYKKLNDKYYIFNINNKFMKFPTKKRFKITSKFNLNRLNPITNKIYPHKGIDIAMPIGTPILSVSNGIIKDISKDNISGNYIVIKHNNRCITKYMHLKKCIVKKGQKINLGQCIGYSGNSGRSTGPHLHFEIWINSNAVNPLTIELNKKYYNMLYINDIRKLIYNIELNISKNILI
SIO_010081: NARPIN1_RS00230
subclass of: SO_0000673
so part of: NARPIN1_RS00230
location: 49772..50881
location: region:49772-50881:1
so has part: feature:49772-50881:1:exon

WP_130579085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49772-50881:1:exon

NARPIN1_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00235
old locus tag: NARPIN1_00480
so part of: sequence
location: 50885..51763
location: region:50885-51763:1
so has part: feature:50885-51763:1:exon
subclass of: SO_0000010

position:50885:1
position: 50885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51763:1
position: 51763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50885-51763:1:exon

NARPIN1_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00235
old locus tag: NARPIN1_00480
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011126318.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit alpha
translation: MKKNIITFQEIITKLQNFWINNGCNIIQPFDIEIGAATLHPITYLFGLKKKEFYFVYTQSCRRPFDSRYNINNFKISKYFQLQIIMRPKINNIQKIYLESLCNIGINFLENDIKFIEDNWENTTLGSWGIGCEVQLNGIEITQITYFKQICGIDCNPVILEITYGLERLSMILQKTNNIYNLIWSINKNNKVLKYKDINCYDELEYSLYNTKYANKKFLFIKFNQYELEIKYLLSLKKPLLIPAYECLLKVIHNFNLLESRNSISIYERQSYILRIQSLSKKISKIYYELNQ
SIO_010081: NARPIN1_RS00235
subclass of: SO_0000673
so part of: NARPIN1_RS00235
location: 50885..51763
location: region:50885-51763:1
so has part: feature:50885-51763:1:exon

WP_130579087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50885-51763:1:exon

NARPIN1_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00240
old locus tag: NARPIN1_00490
so part of: sequence
location: 51760..53886
location: region:51760-53886:1
so has part: feature:51760-53886:1:exon
subclass of: SO_0000010

position:51760:1
position: 51760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53886:1
position: 53886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51760-53886:1:exon

NARPIN1_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00240
old locus tag: NARPIN1_00490
EC number: 6.1.1.14
inference: COORDINATES: protein motif:HMM:NF014183.2
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit beta
translation: MIFKFFKNKYSLFIIEIGIEDLPYSKSKYICDFLLEKYKNNLYKNNLFFKKINIYYSSRRISIISKKLYRINNNIYEIIRGPSLKNLSYNNIFLKFNNWIKKYNLNLNNIKYLIKDNNIFFINFLKINKKYNIKKILFSVVNNSIIELLNNNLNLILSKDIKFIKPIISISLIIDNDFILGKILEIKLNNFFYGNINNIYKKIYINNSKEYINSLKKYGNIIINNYSRKKIILKKINIILKKYNLYIDNNLIEKNIDIYIHLNEYPSVLSIEFNINYIKNLPKSIIEYIIIYHKFIPTYFSYNNELTNKFILISNIISKKYKNLIYWSICNIHNSLNELCIFFNIDIKNDIILLKEKLNEILFRKKLGSMYEKIYRFKIFSLYLIKKTHKYYLYKYINDISDFYKLDLVTNLGIFYPKLQGIISSIYYKIKKNNNINNIVLNSIKNQYFNENDYIKNNKLNYLTYIISLSDKLDTLIGNFILHKYNEYKITGNNDPLYIKKYSIYIIKILINIDLDIKISFLIKKTLLIYNQKKNYDYLFIKIKKFFINRIINFYLNKNYSINIINSVISCQDDSLFDINLRIKSITLFINEDFNKFINIINTYKRINNLIINNIDYNNNINIKKIYIHNKLLTEIKSIENYLSVNINNRKYLKSLYILNILCKKINIYLDNNLILTSNIFIKNYKLKYLFSIINNFYNIVNFNILKF
SIO_010081: NARPIN1_RS00240
subclass of: SO_0000673
so part of: NARPIN1_RS00240
location: 51760..53886
location: region:51760-53886:1
so has part: feature:51760-53886:1:exon

WP_130579089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51760-53886:1:exon

NARPIN1_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: hisS
locus tag: NARPIN1_RS00245
old locus tag: NARPIN1_00500
so part of: sequence
location: 53896..55176
location: region:53896-55176:1
so has part: feature:53896-55176:1:exon
subclass of: SO_0000010

position:53896:1
position: 53896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55176:1
position: 55176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53896-55176:1:exon

NARPIN1_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: hisS
locus tag: NARPIN1_RS00245
old locus tag: NARPIN1_00500
EC number: 6.1.1.21
inference: COORDINATES: protein motif:HMM:TIGR00442.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine--tRNA ligase
translation: MKIYSLKGMKDYNIEKSYIWSYLFDKIKSILVSYGFEFINFPILENTLLFNKSLNNNILINQIYSFLDKNSRNISLRPEGTSCCLRFAIENGLLRGQKKKLWYFGPMFRYENPQLYRYREFYQLGIEAFGFNDINIELEILLLMNNFFKDIDLLKKLVLEINFLGSIEIKNKYSKYLLNFFKENISIFNKIYSLKEIENNPFKILEIKNEYILDFMINNMYKIDSFLTIKDKEYFNKILNLLFFFKIPYKVNYFLIRGINYYDGIIFEWKYYELKSKLSVCSGGRYNNLSKKLGGILTSGIGLAIGWDRLIEFFIIEKGYKNIKNNIKNKILVIVNNIKYIKYAFLLSENIRNLSIKLIINIDYSISSLNKKINYAIKNNFSYIFIIYKIYENKSIILIKDINNFNQKYVYSIDEVIDFIKKNMKI
SIO_010081: NARPIN1_RS00245
subclass of: SO_0000673
so part of: NARPIN1_RS00245
location: 53896..55176
location: region:53896-55176:1
so has part: feature:53896-55176:1:exon

WP_130579091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53896-55176:1:exon

NARPIN1_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: der
locus tag: NARPIN1_RS00250
old locus tag: NARPIN1_00510
so part of: sequence
location: 55178..56521
location: region:55178-56521:1
so has part: feature:55178-56521:1:exon
subclass of: SO_0000010

position:55178:1
position: 55178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56521:1
position: 56521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55178-56521:1:exon

NARPIN1_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: der
locus tag: NARPIN1_RS00250
old locus tag: NARPIN1_00510
EC number: 3.6.5.-
inference: COORDINATES: protein motif:HMM:TIGR03594.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis GTPase Der
translation: MKYDAIVSIIGRSNVGKSLLFNRLLKFNYSLISDDPGTTVDIKYNFINFKSKNIGFIDTAAILDFPNKKIYKKVFNQIIYSINNSNIILFIVDSSNSNFYKDVNLFKFLLTFKKKIFLIINKIDLLNNIKNEFNFINKEDIIYISSLYNKGIRSLINKIFSNTNNFIINDKYKFIDLDNNKYIKLSVIGKQNVGKSTLINSISNEKLLITSSQPGTTKDSTNTIIKLKNINLIFTDTAGIINIDFLSKIKNSSSYINKINYILIKNINKSNIIIFIIDITLEITNKDLILINHLIKLGKPIILLINKCDLLNKKIFKIKKNEILKKLNFIKFINIIFISALYKKNIKHIFNNINIIDKFLFKKLKTNYLNKILYESIKNLNHKYINDKQPKLKFCNIYSTNPIKIIIFGKRTYLLSNSYKKYISNCFYKNLNYKNIPISIIYKEISK
SIO_010081: NARPIN1_RS00250
subclass of: SO_0000673
so part of: NARPIN1_RS00250
location: 55178..56521
location: region:55178-56521:1
so has part: feature:55178-56521:1:exon

WP_130579093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55178-56521:1:exon

NARPIN1_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: tsaB
locus tag: NARPIN1_RS00255
old locus tag: NARPIN1_00520
so part of: sequence
location: complement(56511..57170)
location: region:56511-57170:-1
so has part: feature:56511-57170:-1:exon
subclass of: SO_0000010

position:56511:-1
position: 56511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57170:-1
position: 57170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56511-57170:-1:exon

NARPIN1_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: tsaB
locus tag: NARPIN1_RS00255
old locus tag: NARPIN1_00520
EC number: 2.3.1.234
inference: COORDINATES: protein motif:HMM:TIGR03725.1
GO function: GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
translation: MYNILSIDTTTNICYIGLYYNNNLFKFSRKYNFNYLDKILYDIDYFLFKNNISIKNINIIVCICGPGDFTSTKIGICICHGLSFGIDIPIIKINSLEILAYSSYLYFNKKNNIISMINGYSKLIYWSEFYISRKNICISKFKVIKFTYLCDIIKYINKFDNEYIISGNAYTNHINKFLDNKNILFSKIKVQKIEDVISLSLKLISLNKFSNFKKVLPIY
SIO_010081: NARPIN1_RS00255
subclass of: SO_0000673
so part of: NARPIN1_RS00255
location: complement(56511..57170)
location: region:56511-57170:-1
so has part: feature:56511-57170:-1:exon

WP_130579095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56511-57170:-1:exon

NARPIN1_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00260
old locus tag: NARPIN1_00530
so part of: sequence
location: complement(57216..57428)
location: region:57216-57428:-1
so has part: feature:57216-57428:-1:exon
subclass of: SO_0000010

position:57216:-1
position: 57216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57428:-1
position: 57428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57216-57428:-1:exon

NARPIN1_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00260
old locus tag: NARPIN1_00530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000034825.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MSNKIKGQVKWFNESKGFGFITPSDGGKDVFVHFSSIQGSGFKTLTEGQNVEFEIQESQKGPSAINVNII
SIO_010081: NARPIN1_RS00260
subclass of: SO_0000673
so part of: NARPIN1_RS00260
location: complement(57216..57428)
location: region:57216-57428:-1
so has part: feature:57216-57428:-1:exon

WP_130579097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57216-57428:-1:exon

NARPIN1_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: dnaE
locus tag: NARPIN1_RS00265
old locus tag: NARPIN1_00540
so part of: sequence
location: complement(57516..60281)
location: region:57516-60281:-1
so has part: feature:57516-60281:-1:exon
subclass of: SO_0000010

position:57516:-1
position: 57516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60281:-1
position: 60281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57516-60281:-1:exon

NARPIN1_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: dnaE
locus tag: NARPIN1_RS00265
old locus tag: NARPIN1_00540
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:NF004226.0
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit alpha
translation: MNEFVHLNIHSEYSIFDSLIKIDDLINLANKFNYSSIAINDFSNLFGVIEFYKSCCFNGIKPIIGSDFYLLEDFNINKFNNFKNLNKITIFCLSNIGYKNLILLISDSYKNKKKSNYPIINKKLLVKYNKELLILYGNINSYLGINILNNDLDKIHNDIKFYKKYFNNRFYIEISRIKKKNEELHIYNALKISKYYKLPIVATNEVRFLSKKDFYFHAIKVSIHNNKSISDNLTKYTCEQFFKSKDDINNIFSDIPEVISNSVEISKRCNVFLKFNKRFLPKFNIDENYCKKILTNLSYKGLKNRLKVEYNNINLYKDKINFYEERLNKELNIINNMGFTGYFLIVNEFTKWAIENNIPIGPGRGSGSGSLVSYSLNITCLDPILFDLIFERFLNPNRISMPDFDIDFCVEKRDMVINHVIELYGKDFVSRIITFNCMTAKSVIKDVGRVLGYTFNFINNISKSIPFNSKITLNELIKKEKKFKDLYENDKEIKKIINISKKLEGYVRNIGKHSGGLVISPYKITKFMPLYYDDSNVLTQFDKKSIEKIGLVKFDFLGLKTLTIINNIINNIKVKYKKIVNINYISLDDKLSFDMLISCKTTGIFQLESKGIKKLIKKLKPNTFKDIIDLIALFRPGPLKSGMVDDFINRRNNLEKVYYPYKNLEHELLINILKPTYGIILYQEQIIKIAQIFSNYSLSEADILRQIISSKNYYEMKKHKLKFINGALNNGINKELSSKIFDLIEKFSGYGFNKSHSASYALITYQMLWLKSNYTIIFMSEVMTFNMNNYEKINNLISECKNMNINIINLNINSSKYDFYVNKNNNIEYGIGTIKGLNKNLITEIINDRIKNGYYKSVLDLCIRIDKNFLNKKSIEILIENGLFNSLKIDKNKEINNLDVYIKKSNKLNNNILNKQIDMFE
SIO_010081: NARPIN1_RS00265
subclass of: SO_0000673
so part of: NARPIN1_RS00265
location: complement(57516..60281)
location: region:57516-60281:-1
so has part: feature:57516-60281:-1:exon

WP_130579099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57516-60281:-1:exon

NARPIN1_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: bamA
locus tag: NARPIN1_RS00270
old locus tag: NARPIN1_00550
so part of: sequence
location: complement(60288..62735)
location: region:60288-62735:-1
so has part: feature:60288-62735:-1:exon
subclass of: SO_0000010

position:60288:-1
position: 60288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62735:-1
position: 62735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60288-62735:-1:exon

NARPIN1_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: bamA
locus tag: NARPIN1_RS00270
old locus tag: NARPIN1_00550
inference: COORDINATES: protein motif:HMM:TIGR03303.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamA
translation: MNIFILILIIIPRYLKAEDNIIIKNVCIEGLYRISKDYVISKIPFYYIKEYKIDNNNISNLFNSIISTKHFSHMKLLYNENNSSLIIKLIENPIIISVDFIGNKLLNNDFLKKIFIEKELYINDELSNNKLFNLISLISNLYKSIGNYNVKIETDLLNISPNKVKLKIIFNEGKSSIIKSISINGNNNIKSNKILNKFKSFNNRLKFMNLILRSVYIEKNFEEDLDKMKSLYEENGYFDFIIKDKKITFSEDKSKVFINLYIYEGNKYSINDFELVGDFDSCYYDSLNNILNKYLHKKVFNIKKIKKIKNEIKDFLISKGYSFPMINTKIVNIDNTDKKKLKFNIICNYKFNVRNILISGNNNTLDKVIRREIYQSEFSTLNINLICDDVDRLNKLKLFKKIDVKTISLENNISSTKLVDLLFDISEMNTSGFKVGLSLNENYNPNIKLDFIKSNFLCKNSLISLIINYNKDKANVEFIISDPYFFNDERIKSGSKIFYSSFLKENEYYSLLNINYGISNFINLPMYNSFWSDYELIFHINETKVNYYDYFIFDEVISLSFLKDFFLDNEEIYNRFLPILNKSYDFLFFASFNYDSLNHNIFPTNGKKFTLNCKSTLPLISDNKYYICNITFENYFTNLDFMNLTFFNKTQIYSICNLFKKNIPFYNYFYLDKIDLVRGFKEDPSDYVFECVNYIDSSILERDNIFSDIKIIIKNELCIPTETLLGYKYNNIARLSYFMDFGFEIQSKKEIDNLLESFINIFEYEYMRHVHLSTGLTFRIASSTGLINFSYIIPILKCSPYEKMEKFQFSINKKW
SIO_010081: NARPIN1_RS00270
subclass of: SO_0000673
so part of: NARPIN1_RS00270
location: complement(60288..62735)
location: region:60288-62735:-1
so has part: feature:60288-62735:-1:exon

WP_130579101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60288-62735:-1:exon

NARPIN1_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: uppS
locus tag: NARPIN1_RS00275
old locus tag: NARPIN1_00560
so part of: sequence
location: complement(62783..63532)
location: region:62783-63532:-1
so has part: feature:62783-63532:-1:exon
subclass of: SO_0000010

position:62783:-1
position: 62783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63532:-1
position: 63532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62783-63532:-1:exon

NARPIN1_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: uppS
locus tag: NARPIN1_RS00275
old locus tag: NARPIN1_00560
EC number: 2.5.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499392.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyprenyl diphosphate synthase
translation: MFNFLEKKNFNNKIDYKYYIKHIAIIMDGNGRWAEKKGKLRKYGHIKGIKVINSIIKFSINLKLKVLTLYAFSSENWNRPYSEVSELFKLFNKTLKNEINSLNKNNIKLNIIGNIKELDKDFQNNIYKSEEITKNNTGLILNIAINYGGKWDIIESFKKVLNKIDYKILSINDINESIINDNLCINDCPPIDLVIRTGGEKRISNFLLWQIAYSELYFTDVLWPDFNKIDFYNAIKNFYKRNRKFGKLY
SIO_010081: NARPIN1_RS00275
subclass of: SO_0000673
so part of: NARPIN1_RS00275
location: complement(62783..63532)
location: region:62783-63532:-1
so has part: feature:62783-63532:-1:exon

WP_130579103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62783-63532:-1:exon

NARPIN1_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00280
old locus tag: NARPIN1_00570
so part of: sequence
location: complement(63554..64117)
location: region:63554-64117:-1
so has part: feature:63554-64117:-1:exon
subclass of: SO_0000010

position:63554:-1
position: 63554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64117:-1
position: 64117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63554-64117:-1:exon

NARPIN1_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00280
old locus tag: NARPIN1_00570
inference: COORDINATES: protein motif:HMM:NF013891.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome-recycling factor
translation: MKNIDIFNESDIKINNLIKNFNKYIDNINIGKISVNLISKLKIKYLNNIEELNKLSLITKENSKTLILNPFDKNLLEKIKNCILDSNLDLKVYVCNESYIKIVCSDITEEKRIKIIKIIKENSEKNKIYIRNIRRDFNNKIKNLKNNKEISEDEFNKYNKFFTDKVNKYITYIDDLIKNKEKDLLKI
SIO_010081: NARPIN1_RS00280
subclass of: SO_0000673
so part of: NARPIN1_RS00280
location: complement(63554..64117)
location: region:63554-64117:-1
so has part: feature:63554-64117:-1:exon

WP_130579105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63554-64117:-1:exon

NARPIN1_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: tsf
locus tag: NARPIN1_RS00285
old locus tag: NARPIN1_00580
so part of: sequence
location: complement(64132..64950)
location: region:64132-64950:-1
so has part: feature:64132-64950:-1:exon
subclass of: SO_0000010

position:64132:-1
position: 64132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64950:-1
position: 64950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64132-64950:-1:exon

NARPIN1_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: tsf
locus tag: NARPIN1_RS00285
old locus tag: NARPIN1_00580
inference: COORDINATES: protein motif:HMM:TIGR00116.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation elongation factor Ts
translation: MIMSKDNIELIKKLRKKTGLGLLECKKILHESNFNISLAIKKSFNIKKDKFSKISLSRPSKGKILCGNSKDYKYSILLEINSETDFVSNNEKFNNFCDKIIKYSIENKIENFDNINDKFNLYKLNLVSEFNENISFGKKYIFNNTNFSFSYVHIKKIGVIINFHGNINNLDIIKKISMHIISNKPKYICKNNIPKDIIDNEYYIQNDIFKFKENNNENEKDKYIKNKIEEFIIDNSLLEQKFIFDNNINIKDLLNKYNLKIFNFKIIELKYN
SIO_010081: NARPIN1_RS00285
subclass of: SO_0000673
so part of: NARPIN1_RS00285
location: complement(64132..64950)
location: region:64132-64950:-1
so has part: feature:64132-64950:-1:exon

WP_130579107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64132-64950:-1:exon

NARPIN1_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsB
locus tag: NARPIN1_RS00290
old locus tag: NARPIN1_00590
so part of: sequence
location: complement(64960..65634)
location: region:64960-65634:-1
so has part: feature:64960-65634:-1:exon
subclass of: SO_0000010

position:64960:-1
position: 64960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65634:-1
position: 65634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64960-65634:-1:exon

NARPIN1_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsB
locus tag: NARPIN1_RS00290
old locus tag: NARPIN1_00590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015344543.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S2
translation: MIDFCIEEMINLGIHFGHNIKNWNPKMKPYIFGIYNNIHIINLDKTIELFKIALIELKKIHDKKGKILFVGTKKIFNESIEDIACKCKQYFINNRWLGGTLTNWKTIKKSIKKLKLLEDKYEDKNIVKKFTKKELSIYYKNINKLKKNLLGIKNMNSLPDVLFIIDTINEKIAIEEANKLKIPVFAIADTNSNPDKIDFIIPGNDDSKKSANFYLNNIYNYLNN
SIO_010081: NARPIN1_RS00290
subclass of: SO_0000673
so part of: NARPIN1_RS00290
location: complement(64960..65634)
location: region:64960-65634:-1
so has part: feature:64960-65634:-1:exon

WP_130579109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64960-65634:-1:exon

NARPIN1_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: map
locus tag: NARPIN1_RS00295
old locus tag: NARPIN1_00600
so part of: sequence
location: 65752..66525
location: region:65752-66525:1
so has part: feature:65752-66525:1:exon
subclass of: SO_0000010

position:65752:1
position: 65752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66525:1
position: 66525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65752-66525:1:exon

NARPIN1_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: map
locus tag: NARPIN1_RS00295
old locus tag: NARPIN1_00600
EC number: 3.4.11.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001018195.1
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I methionyl aminopeptidase
translation: MINLDTELEKMLIVGNLASKVLDMIKLYIKPGISTGELNDICNLYIEKKLNAKSAILNYKGFPKSICTSINEVVCHGIPDNNRYIKEGDILNIDVTIFKDGFYGDTSKMFCVGKVSKIASRLCLVAKKSLYLAIKNIYPGIKLNTIGKIIENFVEFNGFYVVKDYCGHGIGKKFHDNPQVLHYYSDYNNYVLKPGMAITIEPMINTISDGVKLMKDGWTVKTKDHGLSAQYEHTILITKNGYLVTTLRDNEKIDFII
SIO_010081: NARPIN1_RS00295
subclass of: SO_0000673
so part of: NARPIN1_RS00295
location: 65752..66525
location: region:65752-66525:1
so has part: feature:65752-66525:1:exon

WP_130579111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65752-66525:1:exon

NARPIN1_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00300
old locus tag: NARPIN1_00610
so part of: sequence
location: complement(66561..66630)
location: region:66561-66630:-1
so has part: feature:66561-66630:-1:exon
subclass of: SO_0000663

position:66561:-1
position: 66561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66630:-1
position: 66630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66561-66630:-1:exon

NARPIN1_RS00300
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00300
old locus tag: NARPIN1_00610
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(66597..66599),aa:Gln,seq:ttg)
SIO_010081: NARPIN1_RS00300
subclass of: SO_0000673
so part of: NARPIN1_RS00300
location: complement(66561..66630)
location: region:66561-66630:-1
so has part: feature:66561-66630:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66561-66630:-1:exon

NARPIN1_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00305
old locus tag: NARPIN1_00620
so part of: sequence
location: complement(66644..66717)
location: region:66644-66717:-1
so has part: feature:66644-66717:-1:exon
subclass of: SO_0000663

position:66644:-1
position: 66644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66717:-1
position: 66717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66644-66717:-1:exon

NARPIN1_RS00305
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00305
old locus tag: NARPIN1_00620
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(66682..66684),aa:Leu,seq:tag)
SIO_010081: NARPIN1_RS00305
subclass of: SO_0000673
so part of: NARPIN1_RS00305
location: complement(66644..66717)
location: region:66644-66717:-1
so has part: feature:66644-66717:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66644-66717:-1:exon

NARPIN1_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00310
old locus tag: NARPIN1_00630
so part of: sequence
location: complement(66730..66804)
location: region:66730-66804:-1
so has part: feature:66730-66804:-1:exon
subclass of: SO_0000663

position:66730:-1
position: 66730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66804:-1
position: 66804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66730-66804:-1:exon

NARPIN1_RS00310
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00310
old locus tag: NARPIN1_00630
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(66767..66769),aa:Met,seq:cat)
SIO_010081: NARPIN1_RS00310
subclass of: SO_0000673
so part of: NARPIN1_RS00310
location: complement(66730..66804)
location: region:66730-66804:-1
so has part: feature:66730-66804:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66730-66804:-1:exon

NARPIN1_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: glnS
locus tag: NARPIN1_RS00315
old locus tag: NARPIN1_00640
so part of: sequence
location: 66874..68514
location: region:66874-68514:1
so has part: feature:66874-68514:1:exon
subclass of: SO_0000010

position:66874:1
position: 66874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68514:1
position: 68514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66874-68514:1:exon

NARPIN1_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: glnS
locus tag: NARPIN1_RS00315
old locus tag: NARPIN1_00640
EC number: 6.1.1.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053916.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine--tRNA ligase
translation: MNDYDLYFNNYIIKIIDKDIKNNKNLKIKTRFPPEPNGYLHIGHAKSIFLNFLIANKYNGECNLRFDDTNPLNIKNKYINSIKKDIDWLGFKNKYNVSYTSDYFDEIFNFAIKLINKNLAYIDKLTINKIKIYRGNLNKIGIDSPYRNNSISENIDYFIKMRNGYFKENEICLRAKIDMKSKSLLMRDPILYRVKFTYHKRTKNKWCIYPTYDFSHCICDFLENITHSLCTLEFEENKKLYNWILNNIDINGFIPKQYEFSRLNLEYNILSKRKINFLINKKIINKWYDPRICTISGLRNRGYTPNSIKVFCKKIGVTKKNSNININILENCIKTDLYENSYRIMSVIDPIKLIIENLNDNYEEEIYVPNFPNKKLSSNRKIVFTKIIYIEKSDFCECLSNTCNKFSIGKIIKLRYSYIICAKKIFKDKKGNIKSILCFLYENTVNSIYLNNIKINKIIHWVSYKKKINSTFYIYENLFLDKYPYKNKNILNIINKNSLIIKNGFIEKSNNKIIKNRIYQFERIGYFYTKLYYKDKNLIFFNIVNI
SIO_010081: NARPIN1_RS00315
subclass of: SO_0000673
so part of: NARPIN1_RS00315
location: 66874..68514
location: region:66874-68514:1
so has part: feature:66874-68514:1:exon

WP_130579113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66874-68514:1:exon

NARPIN1_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00320
old locus tag: NARPIN1_00650
so part of: sequence
location: complement(68532..68801)
location: region:68532-68801:-1
so has part: feature:68532-68801:-1:exon
subclass of: SO_0000010

position:68532:-1
position: 68532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68801:-1
position: 68801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68532-68801:-1:exon

NARPIN1_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00320
old locus tag: NARPIN1_00650
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYKYLISIMFFLYPKVSFSYINFNRVLNYRNLKDFKLILKYNKDKNFYIKIPKDILFLENKDEYNLYIEKFSKNKKINEIDTFPYFVFK
SIO_010081: NARPIN1_RS00320
subclass of: SO_0000673
so part of: NARPIN1_RS00320
location: complement(68532..68801)
location: region:68532-68801:-1
so has part: feature:68532-68801:-1:exon

WP_130579115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68532-68801:-1:exon

NARPIN1_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00325
old locus tag: NARPIN1_00660
so part of: sequence
location: complement(68830..69966)
location: region:68830-69966:-1
so has part: feature:68830-69966:-1:exon
subclass of: SO_0000010

position:68830:-1
position: 68830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69966:-1
position: 69966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68830-69966:-1:exon

NARPIN1_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00325
old locus tag: NARPIN1_00660
inference: COORDINATES: protein motif:HMM:NF012489.2
GO component: GO:0009279 - cell outer membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015288 - porin activity [Evidence IEA]
GO process: GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porin
translation: MIKKIIYLISLIFNYKLQAATSYEFNNNKVNVITNFSVVKDYNNILNKNIGFPTVNLNITGTKKINNYLNAFLLTDVNFKLNELFYNKNFNFIKPKLYFMGLRDVKYGSVSFGRDYGVIFNVNKFVKKVPIIDSFYKPTNYMLYKSSNLLTYKNYNFFNYIEGLDIYLQKQFENDECENLPLYLSTRVSNGDGYGIYTKYKINSFLDVAGAYSTSERTKNQIDFDKNNKNINAIAYSLGFRLNTDKLYISSVYGETYNITPYGNFLMFKTYNEKNRKVNEPSMYGFSDVAKSTGLIMQYKFNTNIIPSVGYFQSKIYTPGNNDNYIIKYVELCMSYKLYKCASLYFNYKINLLNLNDFYKKTNTSCNNLFNLGFNCSI
SIO_010081: NARPIN1_RS00325
subclass of: SO_0000673
so part of: NARPIN1_RS00325
location: complement(68830..69966)
location: region:68830-69966:-1
so has part: feature:68830-69966:-1:exon

WP_130579117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68830-69966:-1:exon

NARPIN1_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: gyrA
locus tag: NARPIN1_RS00330
old locus tag: NARPIN1_00670
so part of: sequence
location: complement(70000..72516)
location: region:70000-72516:-1
so has part: feature:70000-72516:-1:exon
subclass of: SO_0000010

position:70000:-1
position: 70000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72516:-1
position: 72516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70000-72516:-1:exon

NARPIN1_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: gyrA
locus tag: NARPIN1_RS00330
old locus tag: NARPIN1_00670
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672512.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA gyrase subunit A
translation: MKDNIYKNIKEIYIENELKNSYLDYAMSVIISRALPDVRDGLKPVHRRILFAMNNLGNLYNKPYKKSARIVGDVIGKYHPHGDNAVYDSIVRMAQNFSLRYILIEGQGNFGSIDGDSAAAMRYTEIKMSKISSEMLYDLEKDTVDFTKNYDETEYIPNILPSRIPNLLINGSYGIAVGVITNIPPHNLYEVINGCLALIDNKDICIEDLMKFIPGPDFPTYGEIHGINDIIQIYKTGKGKICVRSKVNLENINNIKNIVISELPYQVNKLKLIEKIAELVKNKKIDGINNIRDESDKDGIRVVIEIKKEYDYKIILNNLYKHTSLQINLSINMVALKDGKPKILSLIDILNSFIDHRKNIIYKRNLYLLDKNNEKLNITEGLIIAISNINEIIKIIKSSNSLNEAKNNLLYKKWNLDSNIINLKEENKYIFNKENNKYDLKKIVLNNKQIQSILEIKLQRLTNLEYNKLINEYKLLISQIKKSISILKNNNNLIIELKKELIEIQNEYKDKRRTKIILKKKDIDLDKLINKTDVIITLSHKGYIKIQPVSDYESQKRGGKGKLSTKIKDEDFIYILLVANTHDDLLLFSNKGIVYKIKVYQLPELNRYSRGKLIYNILSIDNNNKITAILPIKPNIYNDNYYICMVTLKGFIKKTLLSKFKNLKNVGIIAIKLNLNDLLIDVKITNGDNNIIIFSANGRSVRFLEKKIKSTGRISFGVKGINLIDNDKVVSIIIPKINSHILTVTENGIGKRTIENEYPIKSRFNIGVISIKVTNKSGKVIKSIEVNNEDQLLIITNSGVLVRIKVSEISLIKRNTKGITLIKLLKDDYVVDLQKISN
SIO_010081: NARPIN1_RS00330
subclass of: SO_0000673
so part of: NARPIN1_RS00330
location: complement(70000..72516)
location: region:70000-72516:-1
so has part: feature:70000-72516:-1:exon

WP_130579119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70000-72516:-1:exon

NARPIN1_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: ssb
locus tag: NARPIN1_RS00335
old locus tag: NARPIN1_00680
so part of: sequence
location: 72669..73133
location: region:72669-73133:1
so has part: feature:72669-73133:1:exon
subclass of: SO_0000010

position:72669:1
position: 72669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73133:1
position: 73133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72669-73133:1:exon

NARPIN1_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: ssb
locus tag: NARPIN1_RS00335
old locus tag: NARPIN1_00680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_044006063.1
GO function: GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MANKGVNKVILVGYLGQDPETRYTQSGNSVTTISLATSETWKDKNTGENRERTEWHRVVFFGKLAEISGEFLKKGSQVYIEGQIQTRKWKDQNGNERYSTEVVVGIGGTMQILNNPFNKNNEIKDNKSFNKEENEENDLDKDINLDDFSDDIQF
SIO_010081: NARPIN1_RS00335
subclass of: SO_0000673
so part of: NARPIN1_RS00335
location: 72669..73133
location: region:72669-73133:1
so has part: feature:72669-73133:1:exon

WP_130579121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72669-73133:1:exon

NARPIN1_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00340
old locus tag: NARPIN1_00690
so part of: sequence
location: complement(73134..73592)
location: region:73134-73592:-1
so has part: feature:73134-73592:-1:exon
subclass of: SO_0000010

position:73134:-1
position: 73134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73592:-1
position: 73592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73134-73592:-1:exon

NARPIN1_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00340
old locus tag: NARPIN1_00690
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIFILLKIFISILLNILVSNYCINYILLNLIIYNLFKIYIINLINNSKLNYKYIYIFIISILKDLIFYNILCIELITIIISDFFIKNNIFIFNNNKYIDKFKLITIYNIITFISKLLIFKILNLIKLNYINFYTNEIICIIISSVISSIIIN
SIO_010081: NARPIN1_RS00340
subclass of: SO_0000673
so part of: NARPIN1_RS00340
location: complement(73134..73592)
location: region:73134-73592:-1
so has part: feature:73134-73592:-1:exon

WP_130579122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73134-73592:-1:exon

NARPIN1_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00345
old locus tag: NARPIN1_00700
so part of: sequence
location: complement(73589..74431)
location: region:73589-74431:-1
so has part: feature:73589-74431:-1:exon
subclass of: SO_0000010

position:73589:-1
position: 73589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74431:-1
position: 74431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73589-74431:-1:exon

NARPIN1_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00345
old locus tag: NARPIN1_00700
inference: COORDINATES: protein motif:HMM:NF016011.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreC
translation: MKNNYYYNNTKNKNKFKYILYLFLFVLILTILIFDYIENNLNIKIKKELTNCIYYFIYNPIIYIENFFKNIKDVFILNKKLININDNLNKKIISDKINKLEYENCKKENIELKKILNINILKKYKYNISKILYYNHVFSRLIIDKGIDENIHIGQPVLNYDGIIGYISLSNKNNSYVNLIYKSKSKISLKNSRNGIIFIAKGSGINGILLCKNFNIILNNTDDFKEGDLLVSSGLDDLYPKNYPVGYISKIIKNKNNYYLDIEIKTLFNINNINYIVILK
SIO_010081: NARPIN1_RS00345
subclass of: SO_0000673
so part of: NARPIN1_RS00345
location: complement(73589..74431)
location: region:73589-74431:-1
so has part: feature:73589-74431:-1:exon

WP_130579124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73589-74431:-1:exon

NARPIN1_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00350
old locus tag: NARPIN1_00710
so part of: sequence
location: complement(74421..75461)
location: region:74421-75461:-1
so has part: feature:74421-75461:-1:exon
subclass of: SO_0000010

position:74421:-1
position: 74421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75461:-1
position: 75461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74421-75461:-1:exon

NARPIN1_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00350
old locus tag: NARPIN1_00710
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462284.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein
translation: MFKKIRGFFSNDLSIDLGTANTLIYVKNQGIVLNEPSVVSIKKDRSGNTSITAVGQEAKRMLGRTPSNIITIRPLKDGVIADFFITEKMLQYFIKQVHSNSFIRPSPRVLICVPVGATQVERRAIRESAQGAGARDVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAIISLNGIVYSSSVRIGGDKFDESIVNYIRRNYGSLIGESTAEKIKHNIGYAYPCKESKEYEIRGRNLAEGIPKIIKLNSNEILDALQEPLSGIVSAIMFALEKCPPELTSDILEKGMILTGGGALLKNINKLITKATGIPVVIAEDPLTCVVRGGGKALEIVNIYDLGLFDEE
SIO_010081: NARPIN1_RS00350
subclass of: SO_0000673
so part of: NARPIN1_RS00350
location: complement(74421..75461)
location: region:74421-75461:-1
so has part: feature:74421-75461:-1:exon

WP_130579126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74421-75461:-1:exon

NARPIN1_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: aroQ
locus tag: NARPIN1_RS00355
old locus tag: NARPIN1_00720
so part of: sequence
location: complement(75454..75918)
location: region:75454-75918:-1
so has part: feature:75454-75918:-1:exon
subclass of: SO_0000010

position:75454:-1
position: 75454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75918:-1
position: 75918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75454-75918:-1:exon

NARPIN1_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: aroQ
locus tag: NARPIN1_RS00355
old locus tag: NARPIN1_00720
EC number: 4.2.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014500089.1
GO function: GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II 3-dehydroquinate dehydratase
translation: MNNVLLINGPNLNLLGIREQNIYGNLSLEKLVNDLINKSKDLNINLNHIQSNSESIIINNIHNSKFNNINFIIINAGAFTHTSIAIRDAFLSVKIPFIEIHISNIYSRDPFRKFSYLSDIAIGTICGLGISSYYFAIQFSKDFLIKNNLNKNNV
SIO_010081: NARPIN1_RS00355
subclass of: SO_0000673
so part of: NARPIN1_RS00355
location: complement(75454..75918)
location: region:75454-75918:-1
so has part: feature:75454-75918:-1:exon

WP_130579128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75454-75918:-1:exon

NARPIN1_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00360
old locus tag: NARPIN1_00730
so part of: sequence
location: complement(75947..76018)
location: region:75947-76018:-1
so has part: feature:75947-76018:-1:exon
subclass of: SO_0000663

position:75947:-1
position: 75947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76018:-1
position: 76018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75947-76018:-1:exon

NARPIN1_RS00360
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00360
old locus tag: NARPIN1_00730
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(75984..75986),aa:Arg,seq:tct)
SIO_010081: NARPIN1_RS00360
subclass of: SO_0000673
so part of: NARPIN1_RS00360
location: complement(75947..76018)
location: region:75947-76018:-1
so has part: feature:75947-76018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:75947-76018:-1:exon

NARPIN1_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00365
old locus tag: NARPIN1_00740
so part of: sequence
location: complement(76048..76341)
location: region:76048-76341:-1
so has part: feature:76048-76341:-1:exon
subclass of: SO_0000010

position:76048:-1
position: 76048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76341:-1
position: 76341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76048-76341:-1:exon

NARPIN1_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00365
old locus tag: NARPIN1_00740
inference: COORDINATES: protein motif:HMM:NF013545.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLILCAEIRNICKNKRLNKKLRVSNKILAVIYGKNILPINIIIEYKDINFLKEKDNLNKEICIKINELCFLSKIKDIQINLIKNKILHIDFYLLNKY
SIO_010081: NARPIN1_RS00365
subclass of: SO_0000673
so part of: NARPIN1_RS00365
location: complement(76048..76341)
location: region:76048-76341:-1
so has part: feature:76048-76341:-1:exon

WP_130579130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76048-76341:-1:exon

NARPIN1_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: tyrS
locus tag: NARPIN1_RS00370
old locus tag: NARPIN1_00750
so part of: sequence
location: complement(76375..77634)
location: region:76375-77634:-1
so has part: feature:76375-77634:-1:exon
subclass of: SO_0000010

position:76375:-1
position: 76375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77634:-1
position: 77634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76375-77634:-1:exon

NARPIN1_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: tyrS
locus tag: NARPIN1_RS00370
old locus tag: NARPIN1_00750
EC number: 6.1.1.1
inference: COORDINATES: protein motif:HMM:TIGR00234.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine--tRNA ligase
translation: MKNKILTHLYSRNLIKKIVNENKLNNLLNENKIVLYSGIDPTSDSLHIGHIILIIFINKFIELNNKFIILIGGSTGLIGDPNFTGNKRNKYTEIFINKNSIEISKQLKNILLNNINYNNINILNNKHWLSKINIIDFLYNIGSKFSIKNILNRKYIKNNIIHNKISYSELTYTLLQSYDFLYLYNNYNTKLQIGGSDQWNNIIYGINLIKKIHNKDTYGITFPIITNNNGIKFSKSSKENIWLDDKKTSPYKFYQFWINLSDNLIFKYLKMFTNESLEYIEYLEKNNIYNNILKAKKLLAEKMTEMIHGKKKLKSAIKITNSLFTGNLNFNEKDLKQLYTDGIPIINVKLGINLQQIIVQFSIVKSNNEAKNIILSNSIKINGIVNNTIKYIFTKKDILYDKYTLLCKGKKNYYLIVWE
SIO_010081: NARPIN1_RS00370
subclass of: SO_0000673
so part of: NARPIN1_RS00370
location: complement(76375..77634)
location: region:76375-77634:-1
so has part: feature:76375-77634:-1:exon

WP_130579132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76375-77634:-1:exon

NARPIN1_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00375
old locus tag: NARPIN1_00760
so part of: sequence
location: 77670..79910
location: region:77670-79910:1
so has part: feature:77670-79910:1:exon
subclass of: SO_0000010

position:77670:1
position: 77670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79910:1
position: 79910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77670-79910:1:exon

NARPIN1_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00375
old locus tag: NARPIN1_00760
inference: COORDINATES: protein motif:HMM:NF013100.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase domain-containing protein
translation: MRLYYNFKLYIIIFIILIIIKLYIIKINNFIDVKLKNNNFIDSNNIVYSKIININCKSNLNKKDIINILLLSKYKKKDIVNIPGEFSINNNILTLFKRSFNFYYGYEKETIFKIFFKENKLIKIKNINDLYVENINIDPNIISIINNNKKYKLFLPISNFPKTLINILIEIEDKNYFSHNGINIKSIIRAIIKNVLNKKIIEGGSTITQQLVKNIFLTNKKSFLRKINEILISIILEYKLNKEKILELYLNEVYFGNINNKEIRGFPLGSICYFGKLINELDINEQAYLVGMLKGSSLYNPVSNFDLVKMRKNFILSKIKVKNIIDEELYNYLILKNNIFNNINNKINYPSFVNIVKKDINKLSLNNKNNLRIFSTLNLITQNNVQKSINISIKNLRKLNNNIEISMIVIDRKKGYIKSSIGGSNYNFDGYNRIFMNRQIGSLIKPFIYISALNIPNKFNLNTNLLDNKLEIKYDDNIWCPKNNDNKFRGNVTLMDSLIYSLNIPTINLGMNIGIDNIINNLIKFGIDKNTFINRFPSMLIGAINLSLIDIAQIYQSISNYGNFNKLSSIRYINDINNNIKYINKNKSIQVISPQSSYLTLFCMSKITKIGTASMLNKNFNNINILGKTGTTNKLKDSWFVGIDNNEICVIWVGNDNNSSINLNKLNNALHVYENYLKISNPESFNLIKPNDIYEINIDKLGNFLCNNHYDCNKIPIWIKNPYEIYNNCPKHSFIIKIIKKLINFN
SIO_010081: NARPIN1_RS00375
subclass of: SO_0000673
so part of: NARPIN1_RS00375
location: 77670..79910
location: region:77670-79910:1
so has part: feature:77670-79910:1:exon

WP_172597008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77670-79910:1:exon

NARPIN1_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00380
old locus tag: NARPIN1_00770
so part of: sequence
location: 79924..81129
location: region:79924-81129:1
so has part: feature:79924-81129:1:exon
subclass of: SO_0000010

position:79924:1
position: 79924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81129:1
position: 81129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79924-81129:1:exon

NARPIN1_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00380
old locus tag: NARPIN1_00770
inference: COORDINATES: protein motif:HMM:NF012341.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKITDLIVKKIIKNEFISIKIIVVLNNKFVGISLMPIESDIIYNNFYIKNIFNSLNLKASMCIKFIKNVIYNNIVGKDPSLQYEIDNLLFLINKKFDNLFFKKIILTVSISIARSYSNYKKIKLHELISELSNNNNNKKPNLILNIFNKNNKNILCNYLDIKNFMLELNSNIFLLENLYYINLIYKKLINKLNKIYNKYLNINNKINSNIILYEINDLIYKSVLYNNNNINIGIDLSASDLYNEHNDFYFLNEKNKVISNCEFIEYIENLLNMYSISYIENSSHKYDWKLSYIQTEIFGNKLKLVGDSIFNNDLFLIEQGIKHNICNSILIKYYNMSTFSEIINICNLVKKYNYKIIISNIFRDIDDLFFIDLALGISSDYIKIGYIYNFNLYKNLILNK
SIO_010081: NARPIN1_RS00380
subclass of: SO_0000673
so part of: NARPIN1_RS00380
location: 79924..81129
location: region:79924-81129:1
so has part: feature:79924-81129:1:exon

WP_130579136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79924-81129:1:exon

NARPIN1_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00385
old locus tag: NARPIN1_00780
so part of: sequence
location: 81126..81821
location: region:81126-81821:1
so has part: feature:81126-81821:1:exon
subclass of: SO_0000010

position:81126:1
position: 81126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81821:1
position: 81821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81126-81821:1:exon

NARPIN1_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00385
old locus tag: NARPIN1_00780
EC number: 3.4.-.-
inference: COORDINATES: protein motif:HMM:NF013700.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MIYNFYINLNLCKKNYFIFNNYNIFNRKIYNININNIFNFNKYLFLYKIKPKNNLEYISKIVKVNTKKLIYINNIKYPYLLNKKFIKIYKYNNLLLNLLELVYVNFLKNINIFKYIYIFNKFNISIIKYNVYINEFNCLSNNSFKYKNKYNGIFIYGKYNSDIISLYNGKILYYNNFNKKYYILVIKHVNNLISIYINSKKFLVKKNCFVLKKQKISTIGMNNKFYFEIIK
SIO_010081: NARPIN1_RS00385
subclass of: SO_0000673
so part of: NARPIN1_RS00385
location: 81126..81821
location: region:81126-81821:1
so has part: feature:81126-81821:1:exon

WP_130579138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81126-81821:1:exon

NARPIN1_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: dnaK
locus tag: NARPIN1_RS00390
old locus tag: NARPIN1_00790
so part of: sequence
location: 81922..83829
location: region:81922-83829:1
so has part: feature:81922-83829:1:exon
subclass of: SO_0000010

position:81922:1
position: 81922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83829:1
position: 83829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81922-83829:1:exon

NARPIN1_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: dnaK
locus tag: NARPIN1_RS00390
old locus tag: NARPIN1_00790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014354240.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaK
translation: MSKIIGIDLGTTNSCVAIIEGNKPRVLENSEGDRTTPSIVAYTSNNEVLIGKPAKRQSITNPKNTLFAIKRLIGRKYDDTEIQKDINLMPYKIIKSDNGDAWIEINNKKIAPPQISAEILKKMKKTAEDYLNESVSEAVITVPAYFNDTQRQATKDAGKIAGLEVKRIINEPTAAALAYGLDKKTENSIIAVYDLGGGTFDISIIEIDDVDGEKTFEVLSTNGDTHLGGEDFDNNIIRYLVNEFKKDNNIDLYNDPLAMQRLKDSSEKAKIELSSSQQTEINLPYITANESGPKHMNYKITRSKLESLVENLVNKTIDPVKLALKDANISISDVKDIILVGGQTRMPLVQKIVSEFFNKEVRKDVNPDEAVAIGAAIQGGVLSGNVKDLLLLDVTPLSLGIETMGGIMTTLIPKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKKSIDNKSLGQFNLDGITPSMRGIPQIEVTFDIDSDGILHVSAKDKNSGKEQKITIQASSGLSDSEIKNMIHEAEVNSELDKKFEELTQLKNQADQIIHGTKKQLNEVKDIISSEEKENIEKHVQELENSLKEEDKNNIENKIKSLIQVSSKLFELSKKNNKEVNEDNKINSNNETIDADFEEIKEDKKS
SIO_010081: NARPIN1_RS00390
subclass of: SO_0000673
so part of: NARPIN1_RS00390
location: 81922..83829
location: region:81922-83829:1
so has part: feature:81922-83829:1:exon

WP_130579140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81922-83829:1:exon

NARPIN1_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: dnaJ
locus tag: NARPIN1_RS00395
old locus tag: NARPIN1_00800
so part of: sequence
location: 83902..85041
location: region:83902-85041:1
so has part: feature:83902-85041:1:exon
subclass of: SO_0000010

position:83902:1
position: 83902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85041:1
position: 85041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83902-85041:1:exon

NARPIN1_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: dnaJ
locus tag: NARPIN1_RS00395
old locus tag: NARPIN1_00800
EC number: 1.8.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410273.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaJ
translation: MNKLDYYKILGLSRDANDRDIKRAYKKLAMKFHPDHNPNNSSSEEKFKEIKEAYEVLINPSKRSAYDKYGHSAFNQDLGGNEGASNRDSNFSSNFSDIFSDIFGDIFSNGSKQKYNKGQDLHYNLEIDFEESIKGCNKDIKILFSDKCDNCENLESKGNYYTKCPACNGYGNIQIRQGFFLIQQTCTKCNGNKKIVKNICNVCSGKSYIKKSKILSIKIPSGINNEDKIKINQKGEINKDSYIRGDLYICVKVKSSNLFVRKDNDLYCEIPINFSVAALGGEIEIPYINGKLKLKIPSETQSGKVFRIKEKGIKRNNVIGDLLCKIIVETPVKLNNNQKKLLYELENTFKSSNININNPQFKNFIDNINIFLEKINKLK
SIO_010081: NARPIN1_RS00395
subclass of: SO_0000673
so part of: NARPIN1_RS00395
location: 83902..85041
location: region:83902-85041:1
so has part: feature:83902-85041:1:exon

WP_130579142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83902-85041:1:exon

NARPIN1_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: recA
locus tag: NARPIN1_RS00400
old locus tag: NARPIN1_00810
so part of: sequence
location: 85146..86147
location: region:85146-86147:1
so has part: feature:85146-86147:1:exon
subclass of: SO_0000010

position:85146:1
position: 85146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86147:1
position: 86147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85146-86147:1:exon

NARPIN1_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: recA
locus tag: NARPIN1_RS00400
old locus tag: NARPIN1_00810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004955189.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase RecA
translation: MNNTEERKKFLAIALDQIEKQFGKGSIMRLGDDRSMDIETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQIIAEAQKKNKTCAFIDAEHALDPLYACKIGVNINDLLCSQPDTGEQALEICDLLTKSKAVDLIIVDSVAALVPKAEIEGEIGDSHIGLTARLMSQAMRKLAGNLKNSNTLLIFVNQIRIKIGVTFGTTETTTGGNALKFYSSIRLDIRKIGSIKDGDNIIGNETRVRVVKNKISIPFKQAEFEILYGYGINSFGELIDIGVKYKLIDRSGSWYSFNGESIGQGRTNACNFLKSHLNIYESIKNQLRNITIKNNK
SIO_010081: NARPIN1_RS00400
subclass of: SO_0000673
so part of: NARPIN1_RS00400
location: 85146..86147
location: region:85146-86147:1
so has part: feature:85146-86147:1:exon

WP_130579144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85146-86147:1:exon

NARPIN1_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: alaS
locus tag: NARPIN1_RS00405
old locus tag: NARPIN1_00820
so part of: sequence
location: 86158..87480
location: region:86158-87480:1
so has part: feature:86158-87480:1:exon
subclass of: SO_0000010

position:86158:1
position: 86158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87480:1
position: 87480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86158-87480:1:exon

NARPIN1_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: alaS
locus tag: NARPIN1_RS00405
old locus tag: NARPIN1_00820
EC number: 6.1.1.7
inference: COORDINATES: protein motif:HMM:TIGR00344.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine--tRNA ligase
translation: MFLSTLNIKNIFINFFKEKDHLEIESSSLIPKNDSSILFTNSGMNQFKNIFLGIEKPIYNKIVTIQRCLRAGGKDNDLSKVGYSSRHHTFFEMLGNFSFNSYFKKSSIEYAWELLTNKNFFNISENRLIVTVYYNDIESYNIWNKNIGISKKKIFKIGDKNNRKYISDNFWSMSEFGPCGPSSEIFCNINKNNCNYNLNLNKISDEYIEIWNLVFIQFNKCKNNNLTELPYFSVDTGMGLERISSIIQEVDSNYKIDLFKDLINKLRKKLNIKYNNIISLKIIADHLRSCIFLISDGIYPSNDKHGYVLKKIIRRSIYHGKLLGVNFPFLYKIIDFIDDNIKYFYTYNINIDFNLIKNIIYLEECKFENSINKGLIILNKKIDEGNTFIDGDFIFLLYDTYGLPIEIINEVCNIKNINFDNKKFNKLLDFQKNKSNSSKK
SIO_010081: NARPIN1_RS00405
subclass of: SO_0000673
so part of: NARPIN1_RS00405
location: 86158..87480
location: region:86158-87480:1
so has part: feature:86158-87480:1:exon

WP_130579146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86158-87480:1:exon

NARPIN1_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00410
old locus tag: NARPIN1_00830
so part of: sequence
location: 87501..87583
location: region:87501-87583:1
so has part: feature:87501-87583:1:exon
subclass of: SO_0000663

position:87501:1
position: 87501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87583:1
position: 87583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87501-87583:1:exon

NARPIN1_RS00410
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00410
old locus tag: NARPIN1_00830
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:87535..87537,aa:Ser,seq:gct)
SIO_010081: NARPIN1_RS00410
subclass of: SO_0000673
so part of: NARPIN1_RS00410
location: 87501..87583
location: region:87501-87583:1
so has part: feature:87501-87583:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87501-87583:1:exon

NARPIN1_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00415
old locus tag: NARPIN1_00840
so part of: sequence
location: 87586..87659
location: region:87586-87659:1
so has part: feature:87586-87659:1:exon
subclass of: SO_0000663

position:87586:1
position: 87586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87659:1
position: 87659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87586-87659:1:exon

NARPIN1_RS00415
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00415
old locus tag: NARPIN1_00840
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:87620..87622,aa:Arg,seq:acg)
SIO_010081: NARPIN1_RS00415
subclass of: SO_0000673
so part of: NARPIN1_RS00415
location: 87586..87659
location: region:87586-87659:1
so has part: feature:87586-87659:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87586-87659:1:exon

NARPIN1_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00420
old locus tag: NARPIN1_00850
so part of: sequence
location: 87723..87795
location: region:87723-87795:1
so has part: feature:87723-87795:1:exon
subclass of: SO_0000663

position:87723:1
position: 87723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87795:1
position: 87795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87723-87795:1:exon

NARPIN1_RS00420
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00420
old locus tag: NARPIN1_00850
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:87756..87758,aa:Thr,seq:tgt)
SIO_010081: NARPIN1_RS00420
subclass of: SO_0000673
so part of: NARPIN1_RS00420
location: 87723..87795
location: region:87723-87795:1
so has part: feature:87723-87795:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87723-87795:1:exon

NARPIN1_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00425
old locus tag: NARPIN1_00860
so part of: sequence
location: 87822..87904
location: region:87822-87904:1
so has part: feature:87822-87904:1:exon
subclass of: SO_0000663

position:87822:1
position: 87822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87904:1
position: 87904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87822-87904:1:exon

NARPIN1_RS00425
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00425
old locus tag: NARPIN1_00860
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:87856..87858,aa:Tyr,seq:gta)
SIO_010081: NARPIN1_RS00425
subclass of: SO_0000673
so part of: NARPIN1_RS00425
location: 87822..87904
location: region:87822-87904:1
so has part: feature:87822-87904:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87822-87904:1:exon

NARPIN1_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01270
old locus tag: NARPIN1_00870
so part of: sequence
location: 87917..87987
location: region:87917-87987:1
so has part: feature:87917-87987:1:exon
subclass of: SO_0000663

position:87917:1
position: 87917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87987:1
position: 87987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87917-87987:1:exon

NARPIN1_RS01270
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS01270
old locus tag: NARPIN1_00870
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:87949..87951,aa:Gly,seq:tcc)
SIO_010081: NARPIN1_RS01270
subclass of: SO_0000673
so part of: NARPIN1_RS01270
location: 87917..87987
location: region:87917-87987:1
so has part: feature:87917-87987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87917-87987:1:exon

NARPIN1_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00430
old locus tag: NARPIN1_00880
so part of: sequence
location: 87998..88072
location: region:87998-88072:1
so has part: feature:87998-88072:1:exon
subclass of: SO_0000663

position:87998:1
position: 87998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88072:1
position: 88072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87998-88072:1:exon

NARPIN1_RS00430
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00430
old locus tag: NARPIN1_00880
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:88033..88035,aa:Thr,seq:ggt)
SIO_010081: NARPIN1_RS00430
subclass of: SO_0000673
so part of: NARPIN1_RS00430
location: 87998..88072
location: region:87998-88072:1
so has part: feature:87998-88072:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87998-88072:1:exon

NARPIN1_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: tuf
locus tag: NARPIN1_RS00435
old locus tag: NARPIN1_00890
so part of: sequence
location: 88102..89286
location: region:88102-89286:1
so has part: feature:88102-89286:1:exon
subclass of: SO_0000010

position:88102:1
position: 88102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89286:1
position: 89286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88102-89286:1:exon

NARPIN1_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: tuf
locus tag: NARPIN1_RS00435
old locus tag: NARPIN1_00890
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312930.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor Tu
translation: MSKEKFKRDKIHINVGTIGHVDHGKTTLTSAITLVLSEKYGGNIYKFDQIDNAPEEKARGITINTSHVEYDSKLRHYAHVDCPGHSDYIKNMITGAAQMDCAILVVAATDGPMPQTREHILLARQVGVPYIVVFINKCDMVSDEEILELVEMEIRELLSQYGFPGEETPIIRGSALKALENDINWSNKILELFDILDKYIPEPKRDIDKPFLLPIEDVFSISGRGTVVTGRVDKGIIKVGDEVEVVGIKDTTKTICTGIEMFRKILDEGRAGENIGVLLRGIKREDIERGQVLAKPNTIKPYIKFESEVYVLKKDEGGRHTPFFKGYKPQFYFRTTDVTGVIELPKDVEMVIPGDNINMIVNLMYPIAMNEGLHFAIREGGKTVGAGIVTKIIS
SIO_010081: NARPIN1_RS00435
subclass of: SO_0000673
so part of: NARPIN1_RS00435
location: 88102..89286
location: region:88102-89286:1
so has part: feature:88102-89286:1:exon

WP_130579433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88102-89286:1:exon

NARPIN1_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: secE
locus tag: NARPIN1_RS00440
so part of: sequence
location: 89317..89577
location: region:89317-89577:1
so has part: feature:89317-89577:1:exon
subclass of: SO_0000010

position:89317:1
position: 89317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89577:1
position: 89577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89317-89577:1:exon

NARPIN1_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: secE
locus tag: NARPIN1_RS00440
inference: COORDINATES: protein motif:HMM:NF012793.2
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecE
translation: MIIKYLSIFFVYFFIFLFYFYIKKNCFFLKNLYNELNKINWISYKKSFYISLLVILISLFLSIFMFGIDILLIYIISIIYNFKKIK
SIO_010081: NARPIN1_RS00440
subclass of: SO_0000673
so part of: NARPIN1_RS00440
location: 89317..89577
location: region:89317-89577:1
so has part: feature:89317-89577:1:exon

WP_130579148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89317-89577:1:exon

NARPIN1_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: nusG
locus tag: NARPIN1_RS00445
old locus tag: NARPIN1_00900
so part of: sequence
location: 89574..90113
location: region:89574-90113:1
so has part: feature:89574-90113:1:exon
subclass of: SO_0000010

position:89574:1
position: 89574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90113:1
position: 90113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89574-90113:1:exon

NARPIN1_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: nusG
locus tag: NARPIN1_RS00445
old locus tag: NARPIN1_00900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015344801.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination/antitermination protein NusG
translation: MNIESKKWYVIQVFSGSENKVLKYIKNYIKIYDLYNYYDDIIIPKEEIIEIKSGNKKKSERKFFPGYILIKMIINDNTLNFIKKVPNVIGFLGYYNKPSYIKENEINLIFDKINKSNKDPKPKITFNLGEKIRVNDGPFSDFYGIVESIDYIKNRLIVSILIFGRPTPVELNFNQVEIN
SIO_010081: NARPIN1_RS00445
subclass of: SO_0000673
so part of: NARPIN1_RS00445
location: 89574..90113
location: region:89574-90113:1
so has part: feature:89574-90113:1:exon

WP_130579150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89574-90113:1:exon

NARPIN1_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplK
locus tag: NARPIN1_RS00450
old locus tag: NARPIN1_00910
so part of: sequence
location: 90136..90567
location: region:90136-90567:1
so has part: feature:90136-90567:1:exon
subclass of: SO_0000010

position:90136:1
position: 90136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90567:1
position: 90567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90136-90567:1:exon

NARPIN1_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplK
locus tag: NARPIN1_RS00450
old locus tag: NARPIN1_00910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013877759.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L11
translation: MKNKIDFYIKFQIPSQEASPNPSIGSVLGQRGINIIEFCKDFNDKTKNIEKGLLISVIVNIYSDKTFLLSIKSPVTSFLLKKELNINLGSKNPGKDFIGSISMDKINNISNLKFKYMNGYDIDSINKSIIGTAKSMGIKIIND
SIO_010081: NARPIN1_RS00450
subclass of: SO_0000673
so part of: NARPIN1_RS00450
location: 90136..90567
location: region:90136-90567:1
so has part: feature:90136-90567:1:exon

WP_130579152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90136-90567:1:exon

NARPIN1_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplJ
locus tag: NARPIN1_RS00455
old locus tag: NARPIN1_00920
so part of: sequence
location: 90655..91167
location: region:90655-91167:1
so has part: feature:90655-91167:1:exon
subclass of: SO_0000010

position:90655:1
position: 90655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91167:1
position: 91167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90655-91167:1:exon

NARPIN1_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplJ
locus tag: NARPIN1_RS00455
old locus tag: NARPIN1_00920
inference: COORDINATES: protein motif:HMM:NF012679.2
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L10
translation: MKIKNIEYKKNIVLNLNELLKHKILSLILINPTYLSFNDLIYIRKNVISKKLNLFMIKNSLLKKSIVNTKFNFIEKYANGPNMILYFYEYNIIDYVKKIISFFKNKNLNNIKLIFVENRIFVESKIDYLHNLISFENSIKKIIFILNKISIINLLKIFNFIKKIKHEEEI
SIO_010081: NARPIN1_RS00455
subclass of: SO_0000673
so part of: NARPIN1_RS00455
location: 90655..91167
location: region:90655-91167:1
so has part: feature:90655-91167:1:exon

WP_130579154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90655-91167:1:exon

NARPIN1_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplL
locus tag: NARPIN1_RS00460
old locus tag: NARPIN1_00930
so part of: sequence
location: 91168..91533
location: region:91168-91533:1
so has part: feature:91168-91533:1:exon
subclass of: SO_0000010

position:91168:1
position: 91168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91533:1
position: 91533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91168-91533:1:exon

NARPIN1_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplL
locus tag: NARPIN1_RS00460
old locus tag: NARPIN1_00930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_044006039.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L7/L12
translation: MSITKEQIIEEISKMSLIEINEFISMIETKFNIKNDLYKENQDTNNDKLKIKDEFNIILKSIGENKISVIKVIRSILNLDLKESKKLVESCPVTLKEKLKESEINNIKELLENAGATIEIQ
SIO_010081: NARPIN1_RS00460
subclass of: SO_0000673
so part of: NARPIN1_RS00460
location: 91168..91533
location: region:91168-91533:1
so has part: feature:91168-91533:1:exon

WP_130579156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91168-91533:1:exon

NARPIN1_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpoB
locus tag: NARPIN1_RS00465
old locus tag: NARPIN1_00940
so part of: sequence
location: 91579..95565
location: region:91579-95565:1
so has part: feature:91579-95565:1:exon
subclass of: SO_0000010

position:91579:1
position: 91579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95565:1
position: 95565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91579-95565:1:exon

NARPIN1_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpoB
locus tag: NARPIN1_RS00465
old locus tag: NARPIN1_00940
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005970328.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta
translation: MSNLNNRIRKDFSKFNNILNIPNLLSIQRESYDKFIGINNKLDSGISNIFNFIFPISSYDNNTVLKYNDFYIENSIYDIQECINRNITYSFSLKSKLSLFINNSLIKEQDTYISYIPIMTENCSFIINGIEKVIVSQLHRSPGVFFDIDKEKSNIYNKNIYNAKIIPYRGSWIDFEFDYKDNLFMRIDKKKKFPVTLILHAFECSNEEILNFFFEKTILDINNNCISINIDFNVILNSIIDFDIYKDNILYIKNGKNISNNDIELLIKNNIYKTDVDFNYIFGKILYKNYYNEHDELLLSSNTLIDKNVIEIIKKNNIKNIEILYDKYDNICISNTIRIDSTYDYNSSVIELFKILKSGESSNIESAKSLFKSIFFSNSKYDLSNIGRMKLNKSLLNNNDNNNLYITKYDIINILKKLINIKNNKDCIDDIDSLGNRRVKLVGEMIENQFKLGLIKVRKSIKEKLSLENIKSLNFQDIINSKQITSVIKEFFNLNQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHNTHYGRLCPIETPEGPNIGLINSLSIYSRVNKYGFLETPYRVVNNNKITNEIHYLSAIEEYNFIIAQALTRLDKNNNFVDELIICRNKGEFKLFNKNLINYIDISPKQIVSVGSSLIPFLEHDDANRALMGANMQRQAVPTIKPDSPIIGTGMEKIVARDSGSLIIAKRGGKIIYLDYSIIIIEVNDSEIIDEKSNIDIYNLKKFIKSNQNTCINNTVIVSLNDIVNKNDVLADGSSTSLGELALGQNVRVAFMSYNGYNFEDSILISEKLVYDNKFSSIHIQELICISRDTKLGPEEITSDIPNVNDLSLSKLDESGIVYIGANISEGDILVGKITPKEETQLTPEEKLLKAIFGEKSSNVKDSSLRVPNGMFGTVIDVQIFNREGIKKDKRSISIEHTKIKNKEKDLLEEKNIIKLGIINKINHLIEYLNINLDKISINNIQINIDNIDENLSTNHNILYNLIKKFNSLEKEYNDKLDLFCLKINKKTELSPGIIKIVKIYIAIKRHIQVGDKMSGRHGNKGVVSKINPIEDMPYDSDGNIVDIVLNPLGVPSRMNIGQILEAHLGLAAKKIGENIDKLLKLENNFLKLKEYIKSVYSIGNDINQKINFDNYSYNEFLNFAKSITSGIYISTPVFDGANQNEIKNMLEISNISKSGQLVLFNGCNGEKFDRKITVGYIYMMKLNHLVDDKMHARSTGSYSLITQQPLGGKSQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRINMYKNIINNNYNIKFNIPESFNVLFKEIRSLGINIELCE
SIO_010081: NARPIN1_RS00465
subclass of: SO_0000673
so part of: NARPIN1_RS00465
location: 91579..95565
location: region:91579-95565:1
so has part: feature:91579-95565:1:exon

WP_130579158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91579-95565:1:exon

NARPIN1_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpoC
locus tag: NARPIN1_RS00470
old locus tag: NARPIN1_00950
so part of: sequence
location: 95597..99670
location: region:95597-99670:1
so has part: feature:95597-99670:1:exon
subclass of: SO_0000010

position:95597:1
position: 95597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99670:1
position: 99670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95597-99670:1:exon

NARPIN1_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpoC
locus tag: NARPIN1_RS00470
old locus tag: NARPIN1_00950
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009873994.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta'
translation: MNKKNNLSENEKFLENFNSIKISLASPEIIKSWSYGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECICGKYRRIKFKGIVCEKCGVEITKSKVRRNRMGHIELSSPVVHIWFLKSLPSKIGLLLNISLKDIEKVLYFESYIVIDNTSTSLKLNQIISEDQYIEYIEKYGDSFKVKIGAEAIQYLLKNFDLNKNYKLLIEELKNSNSNIKQNKIFKRLKLIESFINSKNKPEWMIMTVIPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLISIDAPDIIIKNEKRMLQESVDALFDNGKKNKMITTGINKRPLKSLSDMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLKIDQCGLPKKMALELFKPFIYGKLNLNNSFTIKTAKKMVDNEDPLVLDILSEIIKDHPILLNRAPTLHRLGIQSFKPILIEGKSIQLHPLVCAAYNADFDGDQMAIHIPLTLESKNEAKFIMMSTNNILSPANGDPVIVPSQDIILGLYYMTISYNDEEENNFIFSSVEEVEKAYSLNFVKLHSKVKVRITENRIKNNKYFYKTFIVNTTVGRSILWTIFPKELSFSLINKNLNKKNILDIINISYIKLGIKKTIEFIDKIMRIGFDYSTKSGISVGIDDLIIPNNKYKIIKNSELEVLDIQKQYESGLITQEEKYNKVIDIWSKASDNITNSMMKSLSNISIDSNNNKHINSIFIMYDSGARGSSMQIRQLSGMRGLMIKPDGSIIETPIKANFKEGLNVIEYFISTHGARKGLADTALKTANSGYLTRRLVDVSQDLVVTEYDCNSNDGIYIYLKMEDNEYNIESLKEKILGRTISENIVSKKNKIIIKSNSLINEKNFSILEKNLIDKIKIRSVITCETIYGVCSKCYGFDLSKGKLINIGEAVGIIAAQSIGEPGTQLTMRTFHIGGAASSKYSPRSSIKSKNNGILDLSGSKFVINSDNKILIISNNSEVKILDNNKVIKEIYKVPYGSLIHINDGFCVKSNELIATWDPYILPIITEINGSLEFINVIENITMSYQLDEITGLYYISILDISERPNSGKNIIPIIKVVGDNVSNKYFLPEKSIIQLENNSKVYCGDILAKVPKKSDFIKDITGGLPKISDLFEARKPKDPAILAEMSGIIYIDKNSNKNKKKIIIKSIDDKNKYCEISISKHKQLNVFDGELVNKGDIILNGQVSLYDILKLKGINEITTHIINEVQNIYKLQGVKINNKHIEIIIKQMLRKVCIINPGDSNFLYGDKVDLSIVKKINNNLEKNNKNKIIYEYNLLGITKASLLTDSFISSASFQETTKILTDAAVLNKIDNLKGLKENVIVGRLIPAGTGFLKYNKNK
SIO_010081: NARPIN1_RS00470
subclass of: SO_0000673
so part of: NARPIN1_RS00470
location: 95597..99670
location: region:95597-99670:1
so has part: feature:95597-99670:1:exon

WP_130579160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95597-99670:1:exon

NARPIN1_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsL
locus tag: NARPIN1_RS00475
old locus tag: NARPIN1_00960
so part of: sequence
location: 99767..100132
location: region:99767-100132:1
so has part: feature:99767-100132:1:exon
subclass of: SO_0000010

position:99767:1
position: 99767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100132:1
position: 100132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99767-100132:1:exon

NARPIN1_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsL
locus tag: NARPIN1_RS00475
old locus tag: NARPIN1_00960
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229177.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S12
translation: MVTINQLIKNKRKSKIYKSNVPALLKCPQKRGVCTKVYTVTPKKPNSALRKVCRVKLTNGFEVTAYIGGEGHNLQEHSIILIEGGRVKDLPGVRYHVIRGTLDCSGVKNRKNSRSKYGTKR
SIO_010081: NARPIN1_RS00475
subclass of: SO_0000673
so part of: NARPIN1_RS00475
location: 99767..100132
location: region:99767-100132:1
so has part: feature:99767-100132:1:exon

WP_130579162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99767-100132:1:exon

NARPIN1_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsG
locus tag: NARPIN1_RS00480
old locus tag: NARPIN1_00970
so part of: sequence
location: 100150..100623
location: region:100150-100623:1
so has part: feature:100150-100623:1:exon
subclass of: SO_0000010

position:100150:1
position: 100150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100623:1
position: 100623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100150-100623:1:exon

NARPIN1_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsG
locus tag: NARPIN1_RS00480
old locus tag: NARPIN1_00970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873274.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S7
translation: MSRKSVFNKKSILPDIKFNSILVSKFINLVMISGKKTLAESIVYYALDVLSNNTNKSHLESLENVLNNVRPVIEVKSRKIGGSIYQIPIEVKLDRGNTLAIRWIISFAKKRNEKFNIKIKLSNELLDALNNKGLSIKKRNEIYKIANANKAFAHYRW
SIO_010081: NARPIN1_RS00480
subclass of: SO_0000673
so part of: NARPIN1_RS00480
location: 100150..100623
location: region:100150-100623:1
so has part: feature:100150-100623:1:exon

WP_130579164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100150-100623:1:exon

NARPIN1_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: fusA
locus tag: NARPIN1_RS00485
old locus tag: NARPIN1_00980
so part of: sequence
location: 100625..102718
location: region:100625-102718:1
so has part: feature:100625-102718:1:exon
subclass of: SO_0000010

position:100625:1
position: 100625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102718:1
position: 102718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100625-102718:1:exon

NARPIN1_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: fusA
locus tag: NARPIN1_RS00485
old locus tag: NARPIN1_00980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873273.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor G
translation: MLKNTLIENYRNIGISAHIDAGKTTVTERILFYTGINRKIGEVHHGCATMDWMIQEQERGITITSAATTCFWTGMLNQFKSHRINIIDTPGHVDFTIEVERSMRVLDGAIMVYCAVGGVQPQSETVWKQVNKYSIPRIAFVNKMDRIGANYFNVVDQIKNKLNTITLPIQIPIGLEDKFVGVIDLIKMKSIYWNDSDQGLSFTYSEIPNKLKDISYELNKNIIEHSAESSEKLLDLYFKKGYLNEIEIKSGLKKRVINNDITLVICGSAFKNKGIQPILDCIIDYLPSPNEIKNIKGYSNSKYNIIEERVPNDNSPFSALAFKILSDPFVGNLTFFRVYSGKIKSGDYILNSTKNIKERIGRIVQMHANKKEEIKEVKSGDIAAAIGLKNINTGDTLCDINNPIILEKIDFPEPVIFIAIEPKTKSDQKKMSIALNKLTKEDPSFKAKINEETGQTIISGMGELHLEILVDRMKREFDVEANIGKPQVAYRETIKSTVNQEGKYIRQTGGRGQYGHVWLKIEPNNSSNYEFVDKIVGGSIPKEYLSAINKGIQEQMKNGILYGYPIVNIKVTCYDGSYHEVDSSEIAFKIASSIAFKEAFLKANPILLEPIMKVEIETPEEYIGDVIGDLNKKRSIIDDVINIDLNSKKIISYTPLSEMFGYATELRSKTQGKAFYSMKFFNYKEIPLNISNKIINN
SIO_010081: NARPIN1_RS00485
subclass of: SO_0000673
so part of: NARPIN1_RS00485
location: 100625..102718
location: region:100625-102718:1
so has part: feature:100625-102718:1:exon

WP_130579435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100625-102718:1:exon

NARPIN1_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsJ
locus tag: NARPIN1_RS00490
old locus tag: NARPIN1_00990
so part of: sequence
location: 102787..103101
location: region:102787-103101:1
so has part: feature:102787-103101:1:exon
subclass of: SO_0000010

position:102787:1
position: 102787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103101:1
position: 103101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102787-103101:1:exon

NARPIN1_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsJ
locus tag: NARPIN1_RS00490
old locus tag: NARPIN1_00990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020159205.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S10
translation: MINNKIRIKLKSFDFYLINKSSMDIINTVKRTGSLIRGPVPLPTKIEKFTILISPNIDKNARDQYEIRTYKRLIDIINPTNKTVDSLMYLNLDAGVDVRIISNL
SIO_010081: NARPIN1_RS00490
subclass of: SO_0000673
so part of: NARPIN1_RS00490
location: 102787..103101
location: region:102787-103101:1
so has part: feature:102787-103101:1:exon

WP_130579166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102787-103101:1:exon

NARPIN1_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplC
locus tag: NARPIN1_RS00495
old locus tag: NARPIN1_01000
so part of: sequence
location: 103107..103721
location: region:103107-103721:1
so has part: feature:103107-103721:1:exon
subclass of: SO_0000010

position:103107:1
position: 103107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103721:1
position: 103721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103107-103721:1:exon

NARPIN1_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplC
locus tag: NARPIN1_RS00495
old locus tag: NARPIN1_01000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070347.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L3
translation: MKYIIGKKAGMSRLFLENGSSIPVTLIYLIDNYIIDIYNNINNISKLKITIKSNNNKINKSILGVFKKNNIKVNKIWEFNNFNKYKNSDIGNKIDISFLKDIKKVDITGYSKGKGFSGVIKRWNFKSQDSTHGNSLSHRAPGSIGQNQSPGRVFKNKKMSGHYGCVKVTTKNLKIIDFNINNKILVIKGSCSGLIGSNLIIKSI
SIO_010081: NARPIN1_RS00495
subclass of: SO_0000673
so part of: NARPIN1_RS00495
location: 103107..103721
location: region:103107-103721:1
so has part: feature:103107-103721:1:exon

WP_130579168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103107-103721:1:exon

NARPIN1_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplD
locus tag: NARPIN1_RS00500
old locus tag: NARPIN1_01010
so part of: sequence
location: 103726..104334
location: region:103726-104334:1
so has part: feature:103726-104334:1:exon
subclass of: SO_0000010

position:103726:1
position: 103726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104334:1
position: 104334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103726-104334:1:exon

NARPIN1_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplD
locus tag: NARPIN1_RS00500
old locus tag: NARPIN1_01010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070348.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L4
translation: MELSINDDKYNISLLDTVFNIKFNESLIHQVFTSYKLNSKKGTKFNKNRSNVSGSNKKPWKQKGTGKARSGSKKSPIWRSGGVTFGSQFISYKKKINKKMYNLACKSILSEFIRNNNILVFNNFSIEISKTKLLIEKLKNLNINNNVIIITHFKDINLIRASNNLYKVNIEYIPNINILNVINFSKIIITTESIKYLEKILS
SIO_010081: NARPIN1_RS00500
subclass of: SO_0000673
so part of: NARPIN1_RS00500
location: 103726..104334
location: region:103726-104334:1
so has part: feature:103726-104334:1:exon

WP_130579170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103726-104334:1:exon

NARPIN1_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplW
locus tag: NARPIN1_RS00505
old locus tag: NARPIN1_01020
so part of: sequence
location: 104331..104651
location: region:104331-104651:1
so has part: feature:104331-104651:1:exon
subclass of: SO_0000010

position:104331:1
position: 104331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104651:1
position: 104651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104331-104651:1:exon

NARPIN1_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplW
locus tag: NARPIN1_RS00505
old locus tag: NARPIN1_01020
inference: COORDINATES: protein motif:HMM:NF012498.2
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L23
translation: MNLCKYFECIKSIHLSKKSKFLEKYNILVLKIDKNFTKNDIKKSILNIFKIKVKKINILKTKKKIKRNNNNVGYTKIYKKAFIFLNKNEYININKLEDKLYDINKV
SIO_010081: NARPIN1_RS00505
subclass of: SO_0000673
so part of: NARPIN1_RS00505
location: 104331..104651
location: region:104331-104651:1
so has part: feature:104331-104651:1:exon

WP_130579172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104331-104651:1:exon

NARPIN1_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplB
locus tag: NARPIN1_RS00510
old locus tag: NARPIN1_01030
so part of: sequence
location: 104632..105441
location: region:104632-105441:1
so has part: feature:104632-105441:1:exon
subclass of: SO_0000010

position:104632:1
position: 104632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105441:1
position: 105441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104632-105441:1:exon

NARPIN1_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplB
locus tag: NARPIN1_RS00510
old locus tag: NARPIN1_01030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017805226.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L2
translation: MTLIKYKPTSPGIRHMVRLKNKELYKGRPIKRLTKILNKTGGRNNKGRITTRHIGGRHKRFYRIIDFKRIDTNGIVSRFEYDPNRSSNIALIVNNNIKKYILLPKGLKIGDKIESNGTSTSVGSSLLIRDIPVGSKIHNIEFNPGKGGKISRSAGCYSSLISKSKKYAILRLKSGEIRNINLNCRATIGEVGNSEKVLISLGKAGSNRWKGVRPTVRGTAMNPIDHPHGGGEGKNFGKHPVTPWGKYTKGKKTRNNKLTDKLIIKARNK
SIO_010081: NARPIN1_RS00510
subclass of: SO_0000673
so part of: NARPIN1_RS00510
location: 104632..105441
location: region:104632-105441:1
so has part: feature:104632-105441:1:exon

WP_130579174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104632-105441:1:exon

NARPIN1_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsS
locus tag: NARPIN1_RS00515
old locus tag: NARPIN1_01040
so part of: sequence
location: 105447..105716
location: region:105447-105716:1
so has part: feature:105447-105716:1:exon
subclass of: SO_0000010

position:105447:1
position: 105447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105716:1
position: 105716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105447-105716:1:exon

NARPIN1_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsS
locus tag: NARPIN1_RS00515
old locus tag: NARPIN1_01040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011282743.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S19
translation: MSRSLKKGPFIDISLLKKIEKSLKNKDNKPIKTWSRCSTIFPNMVGLTILVHNGKKHIPVFISNDMVGHKLGEFSPTRTFNGHVLNKEK
SIO_010081: NARPIN1_RS00515
subclass of: SO_0000673
so part of: NARPIN1_RS00515
location: 105447..105716
location: region:105447-105716:1
so has part: feature:105447-105716:1:exon

WP_130579176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105447-105716:1:exon

NARPIN1_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplV
locus tag: NARPIN1_RS00520
old locus tag: NARPIN1_01050
so part of: sequence
location: 105720..106055
location: region:105720-106055:1
so has part: feature:105720-106055:1:exon
subclass of: SO_0000010

position:105720:1
position: 105720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106055:1
position: 106055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105720-106055:1:exon

NARPIN1_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplV
locus tag: NARPIN1_RS00520
old locus tag: NARPIN1_01050
inference: COORDINATES: protein motif:HMM:NF012462.2
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L22
translation: MKIIAKGINIRISNKKLKNISNFISNKKVSYVLNYLTFVSNKSSFILKKIINSAISNAEHNFGLDIDNLKILSIYINKGRSLKRVSFRAKGKLDNIIKRSSNITVILSNNY
SIO_010081: NARPIN1_RS00520
subclass of: SO_0000673
so part of: NARPIN1_RS00520
location: 105720..106055
location: region:105720-106055:1
so has part: feature:105720-106055:1:exon

WP_130579178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105720-106055:1:exon

NARPIN1_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsC
locus tag: NARPIN1_RS00525
old locus tag: NARPIN1_01060
so part of: sequence
location: 106066..106698
location: region:106066-106698:1
so has part: feature:106066-106698:1:exon
subclass of: SO_0000010

position:106066:1
position: 106066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106698:1
position: 106698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106066-106698:1:exon

NARPIN1_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsC
locus tag: NARPIN1_RS00525
old locus tag: NARPIN1_01060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013087520.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S3
translation: MGQKVDPNIFRLGIIKNWNSIWIFDKKEFVKNLHNDFLIRKYIENKLSKSMISNILIERLSNSINIYIHTSKPGTIIGKKGEYIDELKKDIYKISNLSIIKINIVEVKKPNLNAKLVAKNIAYQIEKRISFKKVIKKFIQLIIKSGAKGVKIKISGRLGGSEIARTEWYKEGRIPLHTIRADIDYDLSLSKTTYGIIGVKVWIFKGEIFK
SIO_010081: NARPIN1_RS00525
subclass of: SO_0000673
so part of: NARPIN1_RS00525
location: 106066..106698
location: region:106066-106698:1
so has part: feature:106066-106698:1:exon

WP_130579180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106066-106698:1:exon

NARPIN1_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplP
locus tag: NARPIN1_RS00530
old locus tag: NARPIN1_01070
so part of: sequence
location: 106749..107162
location: region:106749-107162:1
so has part: feature:106749-107162:1:exon
subclass of: SO_0000010

position:106749:1
position: 106749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107162:1
position: 107162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106749-107162:1:exon

NARPIN1_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplP
locus tag: NARPIN1_RS00530
old locus tag: NARPIN1_01070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L16
translation: MLQPKSTKFRKMQKGRNTGFIIDSKISFGLFGLISISRGFISSAQIESARKAISKSMKRQGKLWIRIFPDKPLTKKPLEVRMGKGKGNVENWVFVTKPGCILYEIDYISEEVARKSFKLASDKLPVKTLFIIKNKYI
SIO_010081: NARPIN1_RS00530
subclass of: SO_0000673
so part of: NARPIN1_RS00530
location: 106749..107162
location: region:106749-107162:1
so has part: feature:106749-107162:1:exon

WP_130579182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106749-107162:1:exon

NARPIN1_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpmC
locus tag: NARPIN1_RS00535
old locus tag: NARPIN1_01080
so part of: sequence
location: 107168..107341
location: region:107168-107341:1
so has part: feature:107168-107341:1:exon
subclass of: SO_0000010

position:107168:1
position: 107168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107341:1
position: 107341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107168-107341:1:exon

NARPIN1_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpmC
locus tag: NARPIN1_RS00535
old locus tag: NARPIN1_01080
inference: COORDINATES: protein motif:HMM:TIGR00012.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L29
translation: MCIDNKELYNKLNLLIFEKFKLKIKIKNNNFKKNHLLRKIKKDIAKINTLISINNKK
SIO_010081: NARPIN1_RS00535
subclass of: SO_0000673
so part of: NARPIN1_RS00535
location: 107168..107341
location: region:107168-107341:1
so has part: feature:107168-107341:1:exon

WP_130579184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107168-107341:1:exon

NARPIN1_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsQ
locus tag: NARPIN1_RS00540
old locus tag: NARPIN1_01090
so part of: sequence
location: 107346..107609
location: region:107346-107609:1
so has part: feature:107346-107609:1:exon
subclass of: SO_0000010

position:107346:1
position: 107346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107609:1
position: 107609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107346-107609:1:exon

NARPIN1_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsQ
locus tag: NARPIN1_RS00540
old locus tag: NARPIN1_01090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015047175.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S17
translation: MNNSNKKGIIGKVISDRMNKSIIVKVEKKVKHKLYKKYINKITKFYVHDELNSCKINDFVLIKESRPISKMKSWIFIKKISINNPIK
SIO_010081: NARPIN1_RS00540
subclass of: SO_0000673
so part of: NARPIN1_RS00540
location: 107346..107609
location: region:107346-107609:1
so has part: feature:107346-107609:1:exon

WP_130579186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107346-107609:1:exon

NARPIN1_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplN
locus tag: NARPIN1_RS00545
old locus tag: NARPIN1_01100
so part of: sequence
location: 107611..107979
location: region:107611-107979:1
so has part: feature:107611-107979:1:exon
subclass of: SO_0000010

position:107611:1
position: 107611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107979:1
position: 107979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107611-107979:1:exon

NARPIN1_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplN
locus tag: NARPIN1_RS00545
old locus tag: NARPIN1_01100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004145357.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L14
translation: MIQERTILLVSDNSGAKKVMCIKVLGGSKKKYAYVGDIIKVTVKEIIPRSKIKKGEIFDAVIIRTKKNIHRLNKSYIKFDSNSCVLINSTKNPIGTRIFGPVTNELRYKNFLKIVSLAPEVI
SIO_010081: NARPIN1_RS00545
subclass of: SO_0000673
so part of: NARPIN1_RS00545
location: 107611..107979
location: region:107611-107979:1
so has part: feature:107611-107979:1:exon

WP_130579188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107611-107979:1:exon

NARPIN1_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplX
locus tag: NARPIN1_RS00550
old locus tag: NARPIN1_01110
so part of: sequence
location: 108005..108316
location: region:108005-108316:1
so has part: feature:108005-108316:1:exon
subclass of: SO_0000010

position:108005:1
position: 108005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108316:1
position: 108316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108005-108316:1:exon

NARPIN1_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplX
locus tag: NARPIN1_RS00550
old locus tag: NARPIN1_01110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014353981.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L24
translation: MSKKIKINDDVIVITGKYKGKIGKIIKFVNNNYIIVDKINLVKKSVKICNNNNKNFILKESKINISNVAYFNKEINKLDKIKFLIINNKKFRILKSNNKILDN
SIO_010081: NARPIN1_RS00550
subclass of: SO_0000673
so part of: NARPIN1_RS00550
location: 108005..108316
location: region:108005-108316:1
so has part: feature:108005-108316:1:exon

WP_130579190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108005-108316:1:exon

NARPIN1_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplE
locus tag: NARPIN1_RS00555
old locus tag: NARPIN1_01120
so part of: sequence
location: 108318..108875
location: region:108318-108875:1
so has part: feature:108318-108875:1:exon
subclass of: SO_0000010

position:108318:1
position: 108318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108875:1
position: 108875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108318-108875:1:exon

NARPIN1_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplE
locus tag: NARPIN1_RS00555
old locus tag: NARPIN1_01120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011520521.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L5
translation: MNELYKLYKNKIIYEIKDIMNYSSIMQVPKIEKITLNIGIGDAFYNKKLMDNSLKELEKISCQKPIITKSKKSISNFKIRKGYPIGCKVTLRNKIMWIFIYKLINIAIPRIRDFRGLSFKSFDKNGNYNIGIDEQIIFPEIDYNLIDKIKGMDININIKSSSINESFLLLKKLNFPFKENIDNGK
SIO_010081: NARPIN1_RS00555
subclass of: SO_0000673
so part of: NARPIN1_RS00555
location: 108318..108875
location: region:108318-108875:1
so has part: feature:108318-108875:1:exon

WP_130579192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108318-108875:1:exon

NARPIN1_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsN
locus tag: NARPIN1_RS00560
old locus tag: NARPIN1_01130
so part of: sequence
location: 108879..109184
location: region:108879-109184:1
so has part: feature:108879-109184:1:exon
subclass of: SO_0000010

position:108879:1
position: 108879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109184:1
position: 109184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108879-109184:1:exon

NARPIN1_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsN
locus tag: NARPIN1_RS00560
old locus tag: NARPIN1_01130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011054001.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S14
translation: MSKKSVLLREYKRKIMVNKFFNKRMELKKKIISNLYSKIEKWNFILKLQKFPKNSIMSRLRNRCINTGRPRGFIRRFGLSRLELRKLAVKGFIPGLKKSSW
SIO_010081: NARPIN1_RS00560
subclass of: SO_0000673
so part of: NARPIN1_RS00560
location: 108879..109184
location: region:108879-109184:1
so has part: feature:108879-109184:1:exon

WP_130579193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108879-109184:1:exon

NARPIN1_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsH
locus tag: NARPIN1_RS00565
old locus tag: NARPIN1_01140
so part of: sequence
location: 109212..109607
location: region:109212-109607:1
so has part: feature:109212-109607:1:exon
subclass of: SO_0000010

position:109212:1
position: 109212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109607:1
position: 109607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109212-109607:1:exon

NARPIN1_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsH
locus tag: NARPIN1_RS00565
old locus tag: NARPIN1_01140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011126487.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S8
translation: MSFQDPISDMLTIIRNGQISNKKNVIVYFSKLKNSILDVLKYNNFISDTNIKKINNNKFIEIYLKYINNIPYINKLKRISKPSLRIFSKNKDINKFKIEYGFLVVSTSKGIMLDTDLRKNNLGGEIMFFIS
SIO_010081: NARPIN1_RS00565
subclass of: SO_0000673
so part of: NARPIN1_RS00565
location: 109212..109607
location: region:109212-109607:1
so has part: feature:109212-109607:1:exon

WP_130579195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109212-109607:1:exon

NARPIN1_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplF
locus tag: NARPIN1_RS00570
old locus tag: NARPIN1_01150
so part of: sequence
location: 109620..110174
location: region:109620-110174:1
so has part: feature:109620-110174:1:exon
subclass of: SO_0000010

position:109620:1
position: 109620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110174:1
position: 110174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109620-110174:1:exon

NARPIN1_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplF
locus tag: NARPIN1_RS00570
old locus tag: NARPIN1_01150
inference: COORDINATES: protein motif:HMM:NF012567.2
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L6
translation: MIKKKYIDNLCIDIPININVNITNNILNISGNLGNIDLKFSDLLIINIIDNKIILKNNTLNHRYNKNNSYIKTIFSIIKNNIFGVNFGYTKKLIIVGVGYKFNLNNDLLIINAGFSHEIKYKFPNNIKINLLNNNEITIFGIDKQIVGKIASIIRNYKKPEVYKGKGIRYCNEKILIKQSNKKK
SIO_010081: NARPIN1_RS00570
subclass of: SO_0000673
so part of: NARPIN1_RS00570
location: 109620..110174
location: region:109620-110174:1
so has part: feature:109620-110174:1:exon

WP_130579197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109620-110174:1:exon

NARPIN1_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00575
old locus tag: NARPIN1_01160
so part of: sequence
location: 110179..110550
location: region:110179-110550:1
so has part: feature:110179-110550:1:exon
subclass of: SO_0000010

position:110179:1
position: 110179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110550:1
position: 110550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110179-110550:1:exon

NARPIN1_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00575
old locus tag: NARPIN1_01160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672698.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L18
translation: MKNKINKSYNLKIKNIRKKINNIKLNRLLIYKTSRHIYAQIFSIEKNNIEVYASTTEKSINKYLKNKNIYTGNKESACFIGKIISERSIKNNIFKVFLDKSGFRFHGKIKCLVESARKNGLII
SIO_010081: NARPIN1_RS00575
subclass of: SO_0000673
so part of: NARPIN1_RS00575
location: 110179..110550
location: region:110179-110550:1
so has part: feature:110179-110550:1:exon

WP_130579199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110179-110550:1:exon

NARPIN1_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsE
locus tag: NARPIN1_RS00580
old locus tag: NARPIN1_01170
so part of: sequence
location: 110562..111023
location: region:110562-111023:1
so has part: feature:110562-111023:1:exon
subclass of: SO_0000010

position:110562:1
position: 110562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111023:1
position: 111023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110562-111023:1:exon

NARPIN1_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsE
locus tag: NARPIN1_RS00580
old locus tag: NARPIN1_01170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013878037.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S5
translation: MNNFIEKLICINRVSKTVKGGRIFSFTALTVIGNNNGSVGYGYGKSKEIPVAIQKSIEKAKNNIVNIIINKKTILYRSYGKYLCSKVFIKPACEGTGIIAGNVIRSIFEVSGIKNIFSKIYGSTNPINVVKATINAINNINLIDFINKNRLNK
SIO_010081: NARPIN1_RS00580
subclass of: SO_0000673
so part of: NARPIN1_RS00580
location: 110562..111023
location: region:110562-111023:1
so has part: feature:110562-111023:1:exon

WP_130579202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110562-111023:1:exon

NARPIN1_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplO
locus tag: NARPIN1_RS00585
old locus tag: NARPIN1_01180
so part of: sequence
location: 111069..111503
location: region:111069-111503:1
so has part: feature:111069-111503:1:exon
subclass of: SO_0000010

position:111069:1
position: 111069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111503:1
position: 111503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111069-111503:1:exon

NARPIN1_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplO
locus tag: NARPIN1_RS00585
old locus tag: NARPIN1_01180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014353973.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L15
translation: MKLNNIHPLKNSKFKRKRICRGIGSGNGKTGGRGHKGQKSRSGYKINKLFQGGQTSIYRRLPKFGFNRIKKNKIFELKLSKLNLINDINININILKEKKLIKKNINLIKLIFDYNINRKIILKNILFSKNVLKSIENNGGSIEI
SIO_010081: NARPIN1_RS00585
subclass of: SO_0000673
so part of: NARPIN1_RS00585
location: 111069..111503
location: region:111069-111503:1
so has part: feature:111069-111503:1:exon

WP_130579204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111069-111503:1:exon

NARPIN1_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: secY
locus tag: NARPIN1_RS00590
old locus tag: NARPIN1_01190
so part of: sequence
location: 111521..112840
location: region:111521-112840:1
so has part: feature:111521-112840:1:exon
subclass of: SO_0000010

position:111521:1
position: 111521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112840:1
position: 112840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111521-112840:1:exon

NARPIN1_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: secY
locus tag: NARPIN1_RS00590
old locus tag: NARPIN1_01190
inference: COORDINATES: protein motif:HMM:TIGR00967.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecY
translation: MNNFNIFKINENLIELKNKILILLLYLIIFRIGSFIPIPNINTNIILNNMYKKQEGYIINMFNLFSGGSLKRFSIFSLGIIPYISSSIIIEILCVIFDYFKELKSNNENKYKINKYIYLCTLFLSLLQSFITIFSIPNFFYFKNNSNNVFNYNNIILQIISLTTGTTFLIWLSNKITLNGIGNGTSMIMFSGIISDIPENIINIFNQIKNGYISIYSFIFTIILLFLIINFIVFIECAQKKIIINFYKKYNYKEEILNIQYIYLPIKINILGVTPIIFTSSFMILLLLLINYIKKILKYNFLLIIINTINPNTFIYNIIYMSIIYLFCNIYSLLMFNCKDISKNFKKIGAYIYKIRPGNQTCIYIEEIINKLSLINSFYVNIIFLIPNLMKNIINYPIISNGTSILIVTSVILDIIYKMEVIITSNKYNLILKKINIKN
SIO_010081: NARPIN1_RS00590
subclass of: SO_0000673
so part of: NARPIN1_RS00590
location: 111521..112840
location: region:111521-112840:1
so has part: feature:111521-112840:1:exon

WP_130579206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111521-112840:1:exon

NARPIN1_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpmJ
locus tag: NARPIN1_RS00595
old locus tag: NARPIN1_01200
so part of: sequence
location: 112873..112986
location: region:112873-112986:1
so has part: feature:112873-112986:1:exon
subclass of: SO_0000010

position:112873:1
position: 112873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112986:1
position: 112986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112873-112986:1:exon

NARPIN1_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpmJ
locus tag: NARPIN1_RS00595
old locus tag: NARPIN1_01200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011041472.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L36
translation: MKVRTSVKIICKNCKLLKRKNVIRIYCKYPKHKQRQG
SIO_010081: NARPIN1_RS00595
subclass of: SO_0000673
so part of: NARPIN1_RS00595
location: 112873..112986
location: region:112873-112986:1
so has part: feature:112873-112986:1:exon

WP_130579208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112873-112986:1:exon

NARPIN1_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsM
locus tag: NARPIN1_RS00600
old locus tag: NARPIN1_01210
so part of: sequence
location: 112989..113399
location: region:112989-113399:1
so has part: feature:112989-113399:1:exon
subclass of: SO_0000010

position:112989:1
position: 112989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113399:1
position: 113399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112989-113399:1:exon

NARPIN1_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsM
locus tag: NARPIN1_RS00600
old locus tag: NARPIN1_01210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672692.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S13
translation: MTRIAGVNIPNNKYIYISLTYIYGIGFSLSKKICKCLNINLNTKVSDLSNQNIEDIKKELNKYIIENDLKRINYFNIKKLIDLGSYRGIRHKKHLPVRGQRTRTNAKTCKKYLKDKIIKNKFIKSKVLNEKQKKRK
SIO_010081: NARPIN1_RS00600
subclass of: SO_0000673
so part of: NARPIN1_RS00600
location: 112989..113399
location: region:112989-113399:1
so has part: feature:112989-113399:1:exon

WP_130579211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112989-113399:1:exon

NARPIN1_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsK
locus tag: NARPIN1_RS00605
old locus tag: NARPIN1_01220
so part of: sequence
location: 113374..113763
location: region:113374-113763:1
so has part: feature:113374-113763:1:exon
subclass of: SO_0000010

position:113374:1
position: 113374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113763:1
position: 113763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113374-113763:1:exon

NARPIN1_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsK
locus tag: NARPIN1_RS00605
old locus tag: NARPIN1_01220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009148335.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S11
translation: MKNKKNVSKNNNIQISEGIAYIHVSFNNTIITITDCNGNVLNWCTSGSSGFKGSKKSTPFASQITSEKCVEKAKSNFGIKYLSIRISGPGPGRESAIRALYNSGIHITSIIDITPIPHNGCRPPKRRRI
SIO_010081: NARPIN1_RS00605
subclass of: SO_0000673
so part of: NARPIN1_RS00605
location: 113374..113763
location: region:113374-113763:1
so has part: feature:113374-113763:1:exon

WP_130579213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113374-113763:1:exon

NARPIN1_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsD
locus tag: NARPIN1_RS00610
old locus tag: NARPIN1_01230
so part of: sequence
location: 113768..114388
location: region:113768-114388:1
so has part: feature:113768-114388:1:exon
subclass of: SO_0000010

position:113768:1
position: 113768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114388:1
position: 114388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113768-114388:1:exon

NARPIN1_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsD
locus tag: NARPIN1_RS00610
old locus tag: NARPIN1_01230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004589199.1
GO component: GO:0015935 - small ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S4
translation: MSKYIGPKLKLSRRDNFDLSLKSGCKLIESKCKFNKIPGENFSKKYKYSDYGIRLREKQKLKRIYGILEKQFLNYYKKSINKKENTGNYLIKLLESRLDNIVYRMGFASTRRESRQIINHKLVLVNDKIINIPSYHVTPNTIIRLHKKLLNNPKIIFSINLFKNKEKLDWINVNINNLSGEFLYTPNRLDILKDINENLIIELYSR
SIO_010081: NARPIN1_RS00610
subclass of: SO_0000673
so part of: NARPIN1_RS00610
location: 113768..114388
location: region:113768-114388:1
so has part: feature:113768-114388:1:exon

WP_130579437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113768-114388:1:exon

NARPIN1_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00615
old locus tag: NARPIN1_01240
so part of: sequence
location: 114404..115375
location: region:114404-115375:1
so has part: feature:114404-115375:1:exon
subclass of: SO_0000010

position:114404:1
position: 114404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115375:1
position: 115375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114404-115375:1:exon

NARPIN1_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00615
old locus tag: NARPIN1_01240
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672689.1
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit alpha
translation: MIKNLLKPKLYIENIGNNKSNIIIYPLERGFGHTIGNSLRRVLLSYIPGFAITEVEIEGIIHEYEGKKGVKEDIVNILLNIKDLSIGIINEDIDSELLVINKNEIGPVTANDIKPNNNIKIFNKDHIICNITSNLINLNINMKLQRGIGYNPFNILKKNKNDNNTIIGKLFIDANFNPIKKVSYNIEATRVENKTDLDKLIIYLETNGSVDSEYVIKMASNILIDQFNVLLLNNKDELIVKNETNNYTNSNKLDDKILLKSIDDLELTIRSLNCLKSESIFCIKDLIIKSEDELLKISNLGKKSLSEIKNILNTLNLKLGTKI
SIO_010081: NARPIN1_RS00615
subclass of: SO_0000673
so part of: NARPIN1_RS00615
location: 114404..115375
location: region:114404-115375:1
so has part: feature:114404-115375:1:exon

WP_130579215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114404-115375:1:exon

NARPIN1_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplQ
locus tag: NARPIN1_RS00620
old locus tag: NARPIN1_01250
so part of: sequence
location: 115382..115750
location: region:115382-115750:1
so has part: feature:115382-115750:1:exon
subclass of: SO_0000010

position:115382:1
position: 115382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115750:1
position: 115750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115382-115750:1:exon

NARPIN1_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplQ
locus tag: NARPIN1_RS00620
old locus tag: NARPIN1_01250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015344493.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L17
translation: MRHKKFGRHLNITRSHYKSMFLNMCNSLIENKIIKTTLDKAKELRHIIEPIINRSKINNLHNRRIILNKLKNKKNVFLLFNKIAPLYINRLGGYTRIIKINNRKGDNSKMSFIELVDKNLLI
SIO_010081: NARPIN1_RS00620
subclass of: SO_0000673
so part of: NARPIN1_RS00620
location: 115382..115750
location: region:115382-115750:1
so has part: feature:115382-115750:1:exon

WP_130579217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115382-115750:1:exon

NARPIN1_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: fmt
locus tag: NARPIN1_RS00625
old locus tag: NARPIN1_01260
so part of: sequence
location: complement(115747..116700)
location: region:115747-116700:-1
so has part: feature:115747-116700:-1:exon
subclass of: SO_0000010

position:115747:-1
position: 115747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116700:-1
position: 116700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115747-116700:-1:exon

NARPIN1_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: fmt
locus tag: NARPIN1_RS00625
old locus tag: NARPIN1_01260
EC number: 2.1.2.9
inference: COORDINATES: protein motif:HMM:TIGR00460.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionyl-tRNA formyltransferase
translation: MNNKLKIIFFGSSYFSLSILENICKFNKFLFLYIITKDNNLKINKNNYINLIKLFSIKNGINILQSRNLNENIINIIKKSNPDLIIIASYGNLIPNSIINIPKFGCINIHCSILPKWKGPFPIYWQIISGEKESGITIIKINSKLDSGNIIFQKKCKISEKENYVSLEKKLIDISCESIIYLLHKYINNEKINEIKQINNNNYEYARKINKKIDTKINWNLSSINIDRCIRANYIYGSYFYYENIYIKLWEAEILTTKKNLYKIGEILYIDKDGMGVNTKEGIIQIKVIQFPSKKKIDIKNYINSNNIIFKIGNLLN
SIO_010081: NARPIN1_RS00625
subclass of: SO_0000673
so part of: NARPIN1_RS00625
location: complement(115747..116700)
location: region:115747-116700:-1
so has part: feature:115747-116700:-1:exon

WP_130579219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115747-116700:-1:exon

NARPIN1_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: def
locus tag: NARPIN1_RS00630
old locus tag: NARPIN1_01270
so part of: sequence
location: complement(116693..117184)
location: region:116693-117184:-1
so has part: feature:116693-117184:-1:exon
subclass of: SO_0000010

position:116693:-1
position: 116693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117184:-1
position: 117184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116693-117184:-1:exon

NARPIN1_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: def
locus tag: NARPIN1_RS00630
old locus tag: NARPIN1_01270
EC number: 3.5.1.88
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020025603.1
GO function: GO:0042586 - peptide deformylase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide deformylase
translation: MTILNILIYPNKNLNKVAKLVKNINLNIKKIISDMIDTMYYNKGIGLSATQVNINKRIIVIDVSESKNNPLILINPIILNKNNNIEIIEGCLSFPNIFLKTKRFNEILIRFTNINNEVNTLEVDNLLSVCIQHEIDHLNGILFIKYASEKDIKKINNIFIKNE
SIO_010081: NARPIN1_RS00630
subclass of: SO_0000673
so part of: NARPIN1_RS00630
location: complement(116693..117184)
location: region:116693-117184:-1
so has part: feature:116693-117184:-1:exon

WP_130579221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116693-117184:-1:exon

NARPIN1_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: aroE
locus tag: NARPIN1_RS00635
old locus tag: NARPIN1_01280
so part of: sequence
location: 117277..118110
location: region:117277-118110:1
so has part: feature:117277-118110:1:exon
subclass of: SO_0000010

position:117277:1
position: 117277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118110:1
position: 118110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117277-118110:1:exon

NARPIN1_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: aroE
locus tag: NARPIN1_RS00635
old locus tag: NARPIN1_01280
EC number: 1.1.1.25
inference: COORDINATES: protein motif:HMM:NF001310.0
GO function: GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO process: GO:0019632 - shikimate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shikimate dehydrogenase
translation: MNEFVLFGNPVKHSKSYIIHKIFSKQININYKYYNICVENNEFEKKFFNFFSNNGNGANITVPFKEYVVKYCNLLTNRSLISNSVNVIKNNNGNLLGDNTDGLGIIFDLNRLNFINKNYNILLLGAGGSVKSIIPSLYNKVKNINIFNRTYEKALNIKNFFNKKNINNINVIDINYLYINNKFDLIINATSSGIHGNIPELPSFIINDKVKCYDLFYDLNKDTPFIYWCKYNGSKFNSDGLGMLISQAAYSCYIWFGIMPNILLTIKNIKNNLFNIL
SIO_010081: NARPIN1_RS00635
subclass of: SO_0000673
so part of: NARPIN1_RS00635
location: 117277..118110
location: region:117277-118110:1
so has part: feature:117277-118110:1:exon

WP_130579223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117277-118110:1:exon

NARPIN1_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00640
old locus tag: NARPIN1_01290
so part of: sequence
location: 118179..119009
location: region:118179-119009:1
so has part: feature:118179-119009:1:exon
subclass of: SO_0000010

position:118179:1
position: 118179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119009:1
position: 119009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118179-119009:1:exon

NARPIN1_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00640
old locus tag: NARPIN1_01290
inference: COORDINATES: protein motif:HMM:NF013117.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mechanosensitive ion channel
translation: MNNSIILNKIVNYKLFLFNYIYSIFLSISFLLIGVILSNLVSKFLNKIMEYKNIDKTAINFVSTTIKYSVIILFSIISLNKIGVETTSIVTILGAAGLAIGLALQNSLSNFAAGILLVGFRHFKINDYIDIGGGILGFIVSVQLFSTTLRTLDGKIVIVPNSKILSGNIINLSSEPLKLISTCINIDRSSDIKLAKLLIQDSFKYENRISKNHPTFIIISSITYTSIEITIRFWTSRENSQFVISNILEIVNTKFKENKIFPPRYVLKIINLNNIK
SIO_010081: NARPIN1_RS00640
subclass of: SO_0000673
so part of: NARPIN1_RS00640
location: 118179..119009
location: region:118179-119009:1
so has part: feature:118179-119009:1:exon

WP_130579225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118179-119009:1:exon

NARPIN1_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00645
old locus tag: NARPIN1_01300
so part of: sequence
location: complement(119012..120214)
location: region:119012-120214:-1
so has part: feature:119012-120214:-1:exon
subclass of: SO_0000010

position:119012:-1
position: 119012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120214:-1
position: 120214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119012-120214:-1:exon

NARPIN1_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00645
old locus tag: NARPIN1_01300
inference: COORDINATES: protein motif:HMM:NF012488.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class V-fold PLP-dependent enzyme
translation: MYDINKIRSKFPMLNNNNIYLDNASSTYKPISVINEIINFYKNKYSSYNRNIDLISINNKKNVEYTREYISKFINSNYDEIVFTTGSTESINLIANSLLEFLDYNDNILISIIEHHSNILPWYKISEIKKIKINIIQIYNNGILNLNSIKKFINKKTKIVSISHVSNVLGIQNPITKIIKLIKSINENTIILIDGSQSISHINIDVKKLNCDFYIFSGHKIYSSYGIGILYGKSKLLKKISPYKLGGSIIKYFKKNKPIYLNSPWKFESGSIDISGIFSIRKSIEFIKKINLDKIILWERNITNYAINLLNKIPNIIIYGNINKTPIISFNIKNINCYDINFLLNKNNIIIRSGNQCSIPLMNRYNISGVCRISFALYTNYEDINTFIKKLKLIISTYKK
SIO_010081: NARPIN1_RS00645
subclass of: SO_0000673
so part of: NARPIN1_RS00645
location: complement(119012..120214)
location: region:119012-120214:-1
so has part: feature:119012-120214:-1:exon

WP_130579227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119012-120214:-1:exon

NARPIN1_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00650
old locus tag: NARPIN1_01310
so part of: sequence
location: complement(120219..122549)
location: region:120219-122549:-1
so has part: feature:120219-122549:-1:exon
subclass of: SO_0000010

position:120219:-1
position: 120219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122549:-1
position: 122549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120219-122549:-1:exon

NARPIN1_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00650
old locus tag: NARPIN1_01310
inference: COORDINATES: protein motif:HMM:NF036799.2
GO function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine--tRNA ligase beta subunit-related protein
translation: MKINEYCILKFFNINSKKILKLLDKSGLEVNNVIKTNNNIYKIISGKIIDILYLKDEEYLIKLNISKLKYITIKQNIKYDNYLKNSIVALIFFNKNKKVYIYTPKILEINNNNDPIILNKNTKLGIDLSYLLIFNFNIIDIKIPNNRLDCLNILGICKEISIINNIKINLPFNNIKINPSIDKKFFINIIDKNICSKYCGFYLEKIEGEYNTPIEIKEKLIHSDFKINNNINDIINYIFLETGYLINIFNIYDIYDNEIIIKLTNNDSYYLVNNKNVFIYRNTLSVFNNNNEILNIPGIDIKKNINNYNNIFIGCGSFNYKFININKNLYNNTNHFVENNEIEVEYNLIYSILKYFIKILSNIYKINYSYISKSNLFNIKKYINLNIYKLYKFIGFKIKYENIINILNKLKFKFSINSNNTLKVVIPKTRSDINIKEDLFEEIIKIYGCNKIPKYKKSVLNNNLNNIYLNKLNNKEKIIYKIKKFLIYNGFNEVISYSLVNKNKQNLIYKNNQIDIINPISENMSSFRRSLLIGLLNIIKFNEDRQENNIKIFEHGFCFNYLNNIIVNNEILSGIIYGNKKNDFFKIKSNESFDFYDIKGNVEDILLFFFNKHEFLFVKNKKNNIFDLNQSLKILNIKENIIIGYFGYINNNIIKIFKLKNNVIFFEIYINNININKNTNINKIYNTVINKRDISVTINNNINIYKIINYLNNIKNNQTIKLNLIDYYKEDNINNNFTIRFYIQDKYKTLTYFDIENIVNFYILKLKNKFKIIIKN
SIO_010081: NARPIN1_RS00650
subclass of: SO_0000673
so part of: NARPIN1_RS00650
location: complement(120219..122549)
location: region:120219-122549:-1
so has part: feature:120219-122549:-1:exon

WP_130579228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120219-122549:-1:exon

NARPIN1_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: pheS
locus tag: NARPIN1_RS00655
old locus tag: NARPIN1_01320
so part of: sequence
location: complement(122555..123574)
location: region:122555-123574:-1
so has part: feature:122555-123574:-1:exon
subclass of: SO_0000010

position:122555:-1
position: 122555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123574:-1
position: 123574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122555-123574:-1:exon

NARPIN1_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: pheS
locus tag: NARPIN1_RS00655
old locus tag: NARPIN1_01320
EC number: 6.1.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011069889.1
GO component: GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine--tRNA ligase subunit alpha
translation: MKYYIENKELLFLKLNNIIIRFKEDIKTINNLNDLNILKSKLIGKYSFINKLFKYIYKLDINFKKDIGKKLNLIKYEINNIYIEYKNKLSYNDINYNIKKFDINLPGKKIQIGSFHPISIVILKIENYFNNLGFKTFNCLEIENSYYNFDALNISKNHPSRSNKDTFWIDNTNLLRTQTSCCQIRFLEKNKHPIKIISYGKVYRNDKDKTHTPMFHQFDGFIIDKFVNLKILKNILENFISYFFDYDKKIKIKFRHSYFPFTEPSLELDIKNKYGKWIEVLGCGLIHPNVLNNLKINKKYVGLAFGIGIERLTMLKYDIDDIKILFENNIRFLNQFSYE
SIO_010081: NARPIN1_RS00655
subclass of: SO_0000673
so part of: NARPIN1_RS00655
location: complement(122555..123574)
location: region:122555-123574:-1
so has part: feature:122555-123574:-1:exon

WP_130579230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122555-123574:-1:exon

NARPIN1_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplT
locus tag: NARPIN1_RS00660
old locus tag: NARPIN1_01330
so part of: sequence
location: complement(123576..123923)
location: region:123576-123923:-1
so has part: feature:123576-123923:-1:exon
subclass of: SO_0000010

position:123576:-1
position: 123576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123923:-1
position: 123923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123576-123923:-1:exon

NARPIN1_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplT
locus tag: NARPIN1_RS00660
old locus tag: NARPIN1_01330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011069888.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L20
translation: MTKKKCSVYSHSKHKKILKKSKGYYGSRSKCYKISKQSVIKAGQYSYIDRKIKKRNIRKLWILRINSAVRKYNMNYSSFINILKKKSIFINRKILSIISSNKDQFEKLLSKINFK
SIO_010081: NARPIN1_RS00660
subclass of: SO_0000673
so part of: NARPIN1_RS00660
location: complement(123576..123923)
location: region:123576-123923:-1
so has part: feature:123576-123923:-1:exon

WP_130579233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123576-123923:-1:exon

NARPIN1_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpmI
locus tag: NARPIN1_RS00665
old locus tag: NARPIN1_01340
so part of: sequence
location: complement(123940..124146)
location: region:123940-124146:-1
so has part: feature:123940-124146:-1:exon
subclass of: SO_0000010

position:123940:-1
position: 123940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124146:-1
position: 124146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123940-124146:-1:exon

NARPIN1_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpmI
locus tag: NARPIN1_RS00665
old locus tag: NARPIN1_01340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011069887.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L35
translation: MNVKYKIKNISSLKKRFLVLKSGLIKYKKSNLRHILTKKSSKRRKKLKKRSILSKNNSYLINKYIYYK
SIO_010081: NARPIN1_RS00665
subclass of: SO_0000673
so part of: NARPIN1_RS00665
location: complement(123940..124146)
location: region:123940-124146:-1
so has part: feature:123940-124146:-1:exon

WP_130579235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123940-124146:-1:exon

NARPIN1_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: infC
locus tag: NARPIN1_RS00670
old locus tag: NARPIN1_01350
so part of: sequence
location: complement(124168..124686)
location: region:124168-124686:-1
so has part: feature:124168-124686:-1:exon
subclass of: SO_0000010

position:124168:-1
position: 124168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124686:-1
position: 124686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124168-124686:-1:exon

NARPIN1_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: infC
locus tag: NARPIN1_RS00670
old locus tag: NARPIN1_01350
inference: COORDINATES: protein motif:HMM:TIGR00168.2
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-3
translation: MKKVDNNYLNLNSNLLNSNIRLIDIDGSQIGIFTLDLAFKKSKDLNLDLIELNLNHELPVYKLVNLNKFLYYKNKNIKKNKRKQNLIQLKEIKIRPNIYKKDLDIKIFNIIKFINKKYKVKIIMKFIGREIIHKNIGIDIFKYIIEKTKDISTSEFISNKNDKHIGILLLFK
SIO_010081: NARPIN1_RS00670
subclass of: SO_0000673
so part of: NARPIN1_RS00670
location: complement(124168..124686)
location: region:124168-124686:-1
so has part: feature:124168-124686:-1:exon

WP_269471175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124168-124686:-1:exon

NARPIN1_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: thrS
locus tag: NARPIN1_RS00675
old locus tag: NARPIN1_01360
so part of: sequence
location: complement(124707..126596)
location: region:124707-126596:-1
so has part: feature:124707-126596:-1:exon
subclass of: SO_0000010

position:124707:-1
position: 124707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126596:-1
position: 126596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124707-126596:-1:exon

NARPIN1_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: thrS
locus tag: NARPIN1_RS00675
old locus tag: NARPIN1_01360
EC number: 6.1.1.3
inference: COORDINATES: protein motif:HMM:TIGR00418.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine--tRNA ligase
translation: MFNIVLNNKSITLYNPISIKDIINIKKLYFDKYIFAIINNKKIVNLEFIIYKSSNINIISKNSDYAEKIIKEIILFILGFSIKKIFNKCYLVKSNIEKNKIYCDFFLKKNSNLKNINLIEKNIINLFKNKYYIKRKIIKLNEIKNIFYSKYKKNYIKNLNKNDNINIFSLNNYINLLDINNIDEIVDINLNNLFKLDNFIYKIWYGKNINNLFNRIYIYMNTLSYKKVLDKYRDHRIINNKIKLFYINKTFPGMIFWKNNGLIIFNELKNFIREKLKSYKYIEVISPILMPKEIWYKTEHLKYYDKNIFDVTIDNKKYCIKPMNCPGHINIFNNNIRSYKDLPYRISEFGQCHRNELSGSLHGLLRTKTFVQDDGHIFCTEEQVYKEIKNCIEMIYDVYSKLNLFKIKVKLSTRPNNKIGDDYLWDISEKNIKDILNCCNINYDINYGEGAFYGPKIEFIFLDYLNREWQCGTIQLDFFLPQKLNSFYINKNNKKNNPILIHRAIFGSIERFIGIITEEYYGKFPIWLSPIQILILSISNNQNNYINKISKIIDKYNIRYKIDIRNKKIEYKIRDSIIMKIPYVFICGNLEELNNTVSVRTIDKNDIGSFKIKEILNIIKKEILNKIYN
SIO_010081: NARPIN1_RS00675
subclass of: SO_0000673
so part of: NARPIN1_RS00675
location: complement(124707..126596)
location: region:124707-126596:-1
so has part: feature:124707-126596:-1:exon

WP_130579239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124707-126596:-1:exon

NARPIN1_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00680
old locus tag: NARPIN1_01370
so part of: sequence
location: 126617..127129
location: region:126617-127129:1
so has part: feature:126617-127129:1:exon
subclass of: SO_0000010

position:126617:1
position: 126617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127129:1
position: 127129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126617-127129:1:exon

NARPIN1_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00680
old locus tag: NARPIN1_01370
inference: COORDINATES: protein motif:HMM:NF016214.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-dependent hydrolase
translation: MNIDNHIIFNVISIFILRNINFISISYKDWFYILLGSLLTCMLPDIDHPCSFIGRRFRIISKFIYNIFGHRKITHSLLMILIINFIFKKLILNLNLIPYYIYHGMVIGYINHIIADMFTVSGVPLLWPINIKFKIPLLYKIFYKFNIIIIYILILLILIIKFIFLRKNYN
SIO_010081: NARPIN1_RS00680
subclass of: SO_0000673
so part of: NARPIN1_RS00680
location: 126617..127129
location: region:126617-127129:1
so has part: feature:126617-127129:1:exon

WP_130579241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126617-127129:1:exon

NARPIN1_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: prmC
locus tag: NARPIN1_RS00685
old locus tag: NARPIN1_01380
so part of: sequence
location: complement(127130..127969)
location: region:127130-127969:-1
so has part: feature:127130-127969:-1:exon
subclass of: SO_0000010

position:127130:-1
position: 127130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127969:-1
position: 127969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127130-127969:-1:exon

NARPIN1_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: prmC
locus tag: NARPIN1_RS00685
old locus tag: NARPIN1_01380
EC number: 2.1.1.297
inference: COORDINATES: protein motif:HMM:TIGR00536.1
GO function: GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor N(5)-glutamine methyltransferase
translation: MSIKEWLKYYAFNYLNTNESRYIYDLELIISSVLKIKRENILILENKIINLKNFILLDKILFFLKKGVPLPYLVKNVEFYSLKFKLNNKVFIPRSDTEVLVDFVINKLKNNVVYNIMDLGTGIGSIAISLAKNLPKSNILGIDFNNESIKFANINSKILNVKNVCFINKNWFNYKLNYKFDIIISNPPYISEYEFEYINKNKKIYEPKESLVSKYNGVYDIFYIINKFNKFLKKNGFMLIEHGYLQGKIVRKIFKYNNFTEINTFNDLNKNNRFTYAKK
SIO_010081: NARPIN1_RS00685
subclass of: SO_0000673
so part of: NARPIN1_RS00685
location: complement(127130..127969)
location: region:127130-127969:-1
so has part: feature:127130-127969:-1:exon

WP_130579243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127130-127969:-1:exon

NARPIN1_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00690
old locus tag: NARPIN1_01390
so part of: sequence
location: complement(127974..128729)
location: region:127974-128729:-1
so has part: feature:127974-128729:-1:exon
subclass of: SO_0000010

position:127974:-1
position: 127974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128729:-1
position: 128729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127974-128729:-1:exon

NARPIN1_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00690
old locus tag: NARPIN1_01390
inference: COORDINATES: protein motif:HMM:NF012684.2
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor-like protein
translation: MKKEKNINDNILGCLIEIKSGTGGYESSLFIKDLLKMYIKYSNKKMWDTEIINRNIENKECKNVILKINNNESYNLLKFESGGHRVQRIPKTESQGRIHTSTCIVAVIPITNEEKNKNINLNDLKIDTFKSSGSGGQHVNTTDSAVRITHIPTKLVVECQDERSQHKNKEKALSILKCKLYILKENQKKIENNLLKKKLLGSGNRSDRIRTYNFINNRVTDHRIFLNINKLKEILNGNLDLIISKLSSYKY
SIO_010081: NARPIN1_RS00690
subclass of: SO_0000673
so part of: NARPIN1_RS00690
location: complement(127974..128729)
location: region:127974-128729:-1
so has part: feature:127974-128729:-1:exon

WP_130579245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127974-128729:-1:exon

NARPIN1_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: lolB
locus tag: NARPIN1_RS00695
old locus tag: NARPIN1_01400
so part of: sequence
location: 128879..129487
location: region:128879-129487:1
so has part: feature:128879-129487:1:exon
subclass of: SO_0000010

position:128879:1
position: 128879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129487:1
position: 129487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128879-129487:1:exon

NARPIN1_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: lolB
locus tag: NARPIN1_RS00695
old locus tag: NARPIN1_01400
inference: COORDINATES: protein motif:HMM:TIGR00548.1
GO function: GO:0008320 - protein transmembrane transporter activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipoprotein insertase outer membrane protein LolB
translation: MNYLVYNLININSTLIQCNLNEINNIDINNNFKINKWNIHKKMISEIQQFKINGILTYKNGIKKIFLKFYLDNIKSENYSFIIYNFFGKKIFEFISNNNKLFLKNGKEIINLDNNKYLIEENYKILIKNLSSWIIGLPGDSKEFRINKIGRLKEIKHTYNSKKYIVKYHKYHNSTNPPLPINIEFNQGNDFINLRIKNWILS
SIO_010081: NARPIN1_RS00695
subclass of: SO_0000673
so part of: NARPIN1_RS00695
location: 128879..129487
location: region:128879-129487:1
so has part: feature:128879-129487:1:exon

WP_130579247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128879-129487:1:exon

NARPIN1_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: pth
locus tag: NARPIN1_RS00700
old locus tag: NARPIN1_01410
so part of: sequence
location: 129491..130027
location: region:129491-130027:1
so has part: feature:129491-130027:1:exon
subclass of: SO_0000010

position:129491:1
position: 129491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130027:1
position: 130027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129491-130027:1:exon

NARPIN1_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: pth
locus tag: NARPIN1_RS00700
old locus tag: NARPIN1_01410
EC number: 3.1.1.29
inference: COORDINATES: protein motif:HMM:NF013368.2
GO function: GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoacyl-tRNA hydrolase
translation: MNIKLIAGIGNNLKQYYDTRHNVGIWFINNFIKKYSLNLKYNNKINCFFSKLKLNNNNLILLIPNSFINLSGIYIKKSIIYFKINSNELLIVHDDLYFNIGKFKIKFGGSSAGHNGVKSIINNIYNNFYRLRIGIKNYKNIDNISDFVLSEPNKLEKNIILNSINDSIEYIINFLDKN
SIO_010081: NARPIN1_RS00700
subclass of: SO_0000673
so part of: NARPIN1_RS00700
location: 129491..130027
location: region:129491-130027:1
so has part: feature:129491-130027:1:exon

WP_130579249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129491-130027:1:exon

NARPIN1_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: aroB
locus tag: NARPIN1_RS00705
old locus tag: NARPIN1_01420
so part of: sequence
location: complement(130024..131115)
location: region:130024-131115:-1
so has part: feature:130024-131115:-1:exon
subclass of: SO_0000010

position:130024:-1
position: 130024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131115:-1
position: 131115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130024-131115:-1:exon

NARPIN1_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: aroB
locus tag: NARPIN1_RS00705
old locus tag: NARPIN1_01420
EC number: 4.2.3.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011283108.1
GO function: GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-dehydroquinate synthase
translation: MKIINVKLDNINKYKIIIDYKLFEIINSLYPINKNTKVMIITNNFLKTNYENYFYKKLNELNIKYNIFLIPDGESSKSLNILNLILTEMLNNNMDRNSILISFGGGVIGDITGFSASIYQRGIKFIQIPTTLLSQIDSSIGGKTGINHILGKNMIGSFHQPSSVFIDIFFLKTLPKREISSGLAEAIKYSIIYDKKFFIWLENNIEKILNLDIESLKYCIYKCCKIKSKIISKDEKENGIRSILNFGHTYGHAIEAFMGYGKWTHGESISAGMMISIETAIYLNNFSKKYKNRIKNLILKANLPIKGPNEMNPNNYIPYILKDKKNKNNKIKLIIPEKIGKAVIVDNIKKEIILNSINNNINN
SIO_010081: NARPIN1_RS00705
subclass of: SO_0000673
so part of: NARPIN1_RS00705
location: complement(130024..131115)
location: region:130024-131115:-1
so has part: feature:130024-131115:-1:exon

WP_130579251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130024-131115:-1:exon

NARPIN1_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00710
old locus tag: NARPIN1_01430
so part of: sequence
location: complement(131096..131668)
location: region:131096-131668:-1
so has part: feature:131096-131668:-1:exon
subclass of: SO_0000010

position:131096:-1
position: 131096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131668:-1
position: 131668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131096-131668:-1:exon

NARPIN1_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00710
old locus tag: NARPIN1_01430
EC number: 2.7.1.71
inference: COORDINATES: protein motif:HMM:NF013375.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shikimate kinase
translation: MILKNSKNNIFIIGPTGVGKSTIGYNLSNKLNKKFFDSDKELEKYFNMNINNIFKKNGEKKFRFFEKKIINNILKEKNIILSTGGGSIENKYIRNLLSNNGIVIYLMANIKTQLTRLNNFNDRPLLINKNKYEKENILKKLDNIRNELYNSISDIIIDTNKKNIDEIIDNILNILNINNFIIKNHENNKC
SIO_010081: NARPIN1_RS00710
subclass of: SO_0000673
so part of: NARPIN1_RS00710
location: complement(131096..131668)
location: region:131096-131668:-1
so has part: feature:131096-131668:-1:exon

WP_130579253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131096-131668:-1:exon

NARPIN1_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00715
old locus tag: NARPIN1_01440
so part of: sequence
location: complement(131764..132696)
location: region:131764-132696:-1
so has part: feature:131764-132696:-1:exon
subclass of: SO_0000010

position:131764:-1
position: 131764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132696:-1
position: 132696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131764-132696:-1:exon

NARPIN1_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00715
old locus tag: NARPIN1_01440
inference: COORDINATES: protein motif:HMM:TIGR00005.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO process: GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RluA family pseudouridine synthase
translation: MNNYNIYIINNSNLKIRIDKFLSNNIKNISRSYIKKLILNKNVSINNKIILDPNFILKSNEEIKINLLYINNKNIYSLNRKINIDIIYEDNDIIIINKKPNIIVNPELNNLLISNLIKYYPNLVNIDNFGIVHRLDKNTTGLIIFAKSKLAYLNLKKIFYLRKIIKEYDAIVTGSLISGGFINLPISRNKINRKIMNINIISGKKSITNYRIIKKFNLHTYIKIRIKTGRTHQIRTHMSYIGYPLVGDFIYGKNNSNFKKSCLFLKNKNINFNRQALHSSRVIFNHPISNKEINISISIPYDMKFLLKNI
SIO_010081: NARPIN1_RS00715
subclass of: SO_0000673
so part of: NARPIN1_RS00715
location: complement(131764..132696)
location: region:131764-132696:-1
so has part: feature:131764-132696:-1:exon

WP_130579255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131764-132696:-1:exon

NARPIN1_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: bamD
locus tag: NARPIN1_RS00720
old locus tag: NARPIN1_01450
so part of: sequence
location: 132749..133480
location: region:132749-133480:1
so has part: feature:132749-133480:1:exon
subclass of: SO_0000010

position:132749:1
position: 132749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133480:1
position: 133480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132749-133480:1:exon

NARPIN1_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: bamD
locus tag: NARPIN1_RS00720
old locus tag: NARPIN1_01450
inference: COORDINATES: protein motif:HMM:TIGR03302.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0065003 - protein-containing complex assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamD
translation: MFIYYLISIFSLFDIVLCCNIKNVYNDNLLYNYLINNKYNLAKKELDKINENDLFSSDLKKYLIKKMFVNYKLNNLELSNKILDKLLILYKNDNNLDYIIYMKGLVNFEINEKIVFKCLSYDNFNKNHEYMYKSLEYFKYLVDNFKNSKYYENSIYKILYIKQRLFVHDLYIIDFYFRKNNHISVINRSIHLLKFFPKEPYIYYLIEYIKKSCKLISLNEIEEKLDIIINSNISNFKKLKIKI
SIO_010081: NARPIN1_RS00720
subclass of: SO_0000673
so part of: NARPIN1_RS00720
location: 132749..133480
location: region:132749-133480:1
so has part: feature:132749-133480:1:exon

WP_130579257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132749-133480:1:exon

NARPIN1_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: tyrA
locus tag: NARPIN1_RS00725
old locus tag: NARPIN1_01460
so part of: sequence
location: complement(133481..134623)
location: region:133481-134623:-1
so has part: feature:133481-134623:-1:exon
subclass of: SO_0000010

position:133481:-1
position: 133481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134623:-1
position: 134623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133481-134623:-1:exon

NARPIN1_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: tyrA
locus tag: NARPIN1_RS00725
old locus tag: NARPIN1_01460
EC number: 1.3.1.12
EC number: 5.4.99.5
inference: COORDINATES: protein motif:HMM:NF008400.0
GO function: GO:0004106 - chorismate mutase activity [Evidence IEA]; GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO process: GO:0046417 - chorismate metabolic process [Evidence IEA]; GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional chorismate mutase/prephenate dehydrogenase
translation: MNNKFEFDLKDLRNKIDNIDEKIFNLINERLKIVENIGIIKNKNNISCYVSKREEFILNKLNKKYNKYISYFTISSVIKKIMYESYIKEIYCNNNISNNNNSIKIIFIGGKGKMGSIFKNLFIKYNYNVSEINSKDWENKEEKLLNSNLVFICSPISKLNFVLENIYKYITSECILLDISSIKEKSINKMLNIHSGPVLGLHPMFGPNIRSITKQIIIYSNGRYPEKYKWILNQFKLWGVFIYNLDSNKHDNYMLHIQSLRYINLFMLGSFIMNKNLNIKEIFKISPPIYKIYLSILCKFFSGDINLYLDIIYSSNKSLNLFDEYINYTKNIYNIFSSNKKRNNIINIFENIKSWLNKKNIKELSDINDTLSEEIIINNF
SIO_010081: NARPIN1_RS00725
subclass of: SO_0000673
so part of: NARPIN1_RS00725
location: complement(133481..134623)
location: region:133481-134623:-1
so has part: feature:133481-134623:-1:exon

WP_130579259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133481-134623:-1:exon

NARPIN1_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00730
old locus tag: NARPIN1_01470
so part of: sequence
location: complement(134628..135647)
location: region:134628-135647:-1
so has part: feature:134628-135647:-1:exon
subclass of: SO_0000010

position:134628:-1
position: 134628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135647:-1
position: 135647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134628-135647:-1:exon

NARPIN1_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00730
old locus tag: NARPIN1_01470
EC number: 2.5.1.54
inference: COORDINATES: protein motif:HMM:NF009395.0
GO function: GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-7-phosphoheptulonate synthase
translation: MNNIISENKIISPINLKNKFSINNSIKNKIINSIKIISNIINGKDKRLLIICGPCSIHDFNSSIDYAKLLYNLSLELNDKLYIVMRAYIEKPRTSIGWKGIVNDPMIDNSCNIEKGLNISRELLIQLIDIGIPISTEILNLNIYKYFDDLFSWVSIGARTSESQIHREFSSSLSIPVGFKNNTNGDILSSINAIKTSLKPHTYLGINDFGNLCIIKTKGNKNNHIILRGSKNKPNYFPEDINNCINLINENNLNSKIIIDCSHDNSYKDYSKQLDVSKAVIDQINNNNNLIGLMIESYIYNGNQLINNKLKYGISITDGCIGWKETKFLLKYLYNNFNR
SIO_010081: NARPIN1_RS00730
subclass of: SO_0000673
so part of: NARPIN1_RS00730
location: complement(134628..135647)
location: region:134628-135647:-1
so has part: feature:134628-135647:-1:exon

WP_130579261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134628-135647:-1:exon

NARPIN1_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00735
old locus tag: NARPIN1_01480
so part of: sequence
location: complement(135774..136136)
location: region:135774-136136:-1
so has part: feature:135774-136136:-1:exon
subclass of: SO_0000010

position:135774:-1
position: 135774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136136:-1
position: 136136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135774-136136:-1:exon

NARPIN1_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00735
old locus tag: NARPIN1_01480
inference: COORDINATES: protein motif:HMM:NF013414.2
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L19
translation: MFSKIINEFEKKQLKNNLYKIKVGDFITVEINVFDKLRKNKIQYFSGIIISIKNKRICSSIIVRKYSNGEGIEQLFFIHSNNIKNIIINNSNRVRKSKLFFIKKNKFNKLIKTNKKYINI
SIO_010081: NARPIN1_RS00735
subclass of: SO_0000673
so part of: NARPIN1_RS00735
location: complement(135774..136136)
location: region:135774-136136:-1
so has part: feature:135774-136136:-1:exon

WP_130579264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135774-136136:-1:exon

NARPIN1_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: trmD
locus tag: NARPIN1_RS00740
old locus tag: NARPIN1_01490
so part of: sequence
location: complement(136141..136884)
location: region:136141-136884:-1
so has part: feature:136141-136884:-1:exon
subclass of: SO_0000010

position:136141:-1
position: 136141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136884:-1
position: 136884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136141-136884:-1:exon

NARPIN1_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: trmD
locus tag: NARPIN1_RS00740
old locus tag: NARPIN1_01490
EC number: 2.1.1.228
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006310805.1
GO function: GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (guanosine(37)-N1)-methyltransferase TrmD
translation: MINIIILTIFPNIFDSIIKYGIINKAIKNNKLNIKLYNIRNFSKNKYKSIDDYQYGGGKGMVMKFEPIYYSLLNAKKDIGYNSYVIYLSPKGKIINNLDIIRLSNKKSIILLCGRYEGIDNRIMNFINEEISIGDYVLSGGEIPAMVLLDLISRNIYGVLNSYESIKNDSFFNNLLDYPSYTRPRKFMNIEVPNVLLSGNHKNIYKWRLIKSIEYTINNKPYLLYNRNFSNEENKIIKSFKLNLDKK
SIO_010081: NARPIN1_RS00740
subclass of: SO_0000673
so part of: NARPIN1_RS00740
location: complement(136141..136884)
location: region:136141-136884:-1
so has part: feature:136141-136884:-1:exon

WP_130579266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136141-136884:-1:exon

NARPIN1_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsP
locus tag: NARPIN1_RS00745
old locus tag: NARPIN1_01500
so part of: sequence
location: complement(136881..137132)
location: region:136881-137132:-1
so has part: feature:136881-137132:-1:exon
subclass of: SO_0000010

position:136881:-1
position: 136881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137132:-1
position: 137132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136881-137132:-1:exon

NARPIN1_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsP
locus tag: NARPIN1_RS00745
old locus tag: NARPIN1_01500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070053.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S16
translation: MILVKLIWYFMLKIRLSKSKSKNNLYYKIVVIDSRKSKNSKFIEKVGFFNEKNKLLYINNNRVFFWIKNGAKLSDKVKYLINK
SIO_010081: NARPIN1_RS00745
subclass of: SO_0000673
so part of: NARPIN1_RS00745
location: complement(136881..137132)
location: region:136881-137132:-1
so has part: feature:136881-137132:-1:exon

WP_232021807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136881-137132:-1:exon

NARPIN1_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: murB
locus tag: NARPIN1_RS00750
old locus tag: NARPIN1_01510
so part of: sequence
location: complement(137119..138150)
location: region:137119-138150:-1
so has part: feature:137119-138150:-1:exon
subclass of: SO_0000010

position:137119:-1
position: 137119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138150:-1
position: 138150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137119-138150:-1:exon

NARPIN1_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: murB
locus tag: NARPIN1_RS00750
old locus tag: NARPIN1_01510
EC number: 1.3.1.98
inference: COORDINATES: protein motif:HMM:NF000755.0
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate dehydrogenase
translation: MLTNIEFNKSLKKYISFSMNVYTKYFIKINKLDILYKIFDHFKSLPIIILGNGTNTIFLKDFLGLIIINNIKYISFIKKNKYYYLHVGSGINWNDLVLYSIKNNIYGLENLAMIPGKVGAAPIFNIGAYGLEIKNICKYVDILDIKRRKIIRFNKNKCKFKYRNSKLGNLSSRYIIIYLGLKLPIKWKPLINYYKLKNINIKKCNPRYIYNFISNLRKKNIPNYKKINNSGSFFKNLTLNKSKIIKILNKYSNVPYSLISKYKFRIPTGWLIDKCDFKGFRIGNVCVDSNNSAIITNYGSINNDIIFLIKFIYYKIYIKFNIKISLEVLIYFYNNRINLNDIS
SIO_010081: NARPIN1_RS00750
subclass of: SO_0000673
so part of: NARPIN1_RS00750
location: complement(137119..138150)
location: region:137119-138150:-1
so has part: feature:137119-138150:-1:exon

WP_130579268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137119-138150:-1:exon

NARPIN1_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: mnmG
locus tag: NARPIN1_RS00755
old locus tag: NARPIN1_01520
pseudo: true
so part of: sequence
location: complement(138151..140041)
location: region:138151-140041:-1
so has part: feature:138151-140041:-1:exon
subclass of: SO_0000010

position:138151:-1
position: 138151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140041:-1
position: 140041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138151-140041:-1:exon

NARPIN1_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: mnmG
locus tag: NARPIN1_RS00755
old locus tag: NARPIN1_01520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011520350.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
SIO_010081: NARPIN1_RS00755
subclass of: SO_0000673
so part of: NARPIN1_RS00755
location: complement(138151..140041)
location: region:138151-140041:-1
so has part: feature:138151-140041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138151-140041:-1:exon

NARPIN1_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00760
old locus tag: NARPIN1_01530
so part of: sequence
location: complement(140038..141084)
location: region:140038-141084:-1
so has part: feature:140038-141084:-1:exon
subclass of: SO_0000010

position:140038:-1
position: 140038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141084:-1
position: 141084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140038-141084:-1:exon

NARPIN1_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00760
old locus tag: NARPIN1_01530
inference: COORDINATES: protein motif:HMM:NF023301.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: murein transglycosylase domain-containing protein
translation: MFFFILLIIKIFIINNYKNNYNLNSNDFYQIKNLIYQINNNIESIWGKNEIILVKNNNILKYYFDNKARIYVDFKLNKIIIETLLINNLNNIFKKILFNILNNNINFKFNNNVLKSEKLYIYKNILGKNKFPLLYKKDISNYIDFLVKNCINKRMSSKKNIIYIKIDIFNINNYKYNNYINIINKYSKKYNIDKSLILSIIHAESKFNPYAISNLEAIGLMQIIRNKSGLDVFKYKKKNNFPSVVYLINPKNNINVGVSYLYILKNKYFYNVKNTESIKYLIISSYNGGIKNVLNIFSLNFNDSINIINNKTSNELFNIILNNHPLKETRDYLIKVNSLYNFYKKNIK
SIO_010081: NARPIN1_RS00760
subclass of: SO_0000673
so part of: NARPIN1_RS00760
location: complement(140038..141084)
location: region:140038-141084:-1
so has part: feature:140038-141084:-1:exon

WP_130579270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140038-141084:-1:exon

NARPIN1_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: asnS
locus tag: NARPIN1_RS00765
old locus tag: NARPIN1_01540
so part of: sequence
location: complement(141087..142478)
location: region:141087-142478:-1
so has part: feature:141087-142478:-1:exon
subclass of: SO_0000010

position:141087:-1
position: 141087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142478:-1
position: 142478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141087-142478:-1:exon

NARPIN1_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: asnS
locus tag: NARPIN1_RS00765
old locus tag: NARPIN1_01540
EC number: 6.1.1.22
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011126690.1
GO function: GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: asparagine--tRNA ligase
translation: MFIINNKILKKMKNSISILYLLKNIDKFLNKIVSINGWVRNKRTSNIGITFISIYDGSSFNDIQIISNNNLKNYKEITNITTGYSLNVIGLLIKSIGKFQSYEIKATEINIIGKINDPKSYPISKKKHSLEFLRKVEHLRIRTKLFSSISRIRSFVFNSINNFMNKNNFIWVPTSIITCYNTEGNNQLFEVHLKDDLKKKFFGKDTFLTVSGQLNLESYACGLSKVYTFGPAFRAENSNTRKHLSEFWMLEVEIAFNNLDDIILLSELLIKNVYNLLLDNYIDDIVFIHRKNNLKIDYLNNIINNNFNILDYSDAIKIINKSKFNNIKWGLDISSDNEKYLLDYFNNIPVVIKNFPKNIKPFYMKVNNDEITVSSMDILLPNVGEVIGGSEREDNYEILNERLMNCFGDDLSNYQWYSDLRKYGSVPHSGFGLGFERLLLSITGMNNIRDISPFPKTPNNINS
SIO_010081: NARPIN1_RS00765
subclass of: SO_0000673
so part of: NARPIN1_RS00765
location: complement(141087..142478)
location: region:141087-142478:-1
so has part: feature:141087-142478:-1:exon

WP_232021808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141087-142478:-1:exon

NARPIN1_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00770
old locus tag: NARPIN1_01550
so part of: sequence
location: complement(142466..142741)
location: region:142466-142741:-1
so has part: feature:142466-142741:-1:exon
subclass of: SO_0000010

position:142466:-1
position: 142466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142741:-1
position: 142741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142466-142741:-1:exon

NARPIN1_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00770
old locus tag: NARPIN1_01550
inference: COORDINATES: protein motif:HMM:TIGR03342.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TusE/DsrC/DsvC family sulfur relay protein
translation: MKNWNKNFAINIARKKKIILNDKHWDIIYFIRDFYYKYKISPSINILIIFFNKKNINNKISLNYLNLIFKNKFDKNIYKISGIPYPNKCLL
SIO_010081: NARPIN1_RS00770
subclass of: SO_0000673
so part of: NARPIN1_RS00770
location: complement(142466..142741)
location: region:142466-142741:-1
so has part: feature:142466-142741:-1:exon

WP_130579272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142466-142741:-1:exon

NARPIN1_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00775
old locus tag: NARPIN1_01560
so part of: sequence
location: 142785..142872
location: region:142785-142872:1
so has part: feature:142785-142872:1:exon
subclass of: SO_0000663

position:142785:1
position: 142785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142872:1
position: 142872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142785-142872:1:exon

NARPIN1_RS00775
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00775
old locus tag: NARPIN1_01560
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:142819..142821,aa:Ser,seq:tga)
SIO_010081: NARPIN1_RS00775
subclass of: SO_0000673
so part of: NARPIN1_RS00775
location: 142785..142872
location: region:142785-142872:1
so has part: feature:142785-142872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142785-142872:1:exon

NARPIN1_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00780
old locus tag: NARPIN1_01570
so part of: sequence
location: complement(142911..144602)
location: region:142911-144602:-1
so has part: feature:142911-144602:-1:exon
subclass of: SO_0000010

position:142911:-1
position: 142911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144602:-1
position: 144602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142911-144602:-1:exon

NARPIN1_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00780
old locus tag: NARPIN1_01570
inference: COORDINATES: protein motif:HMM:TIGR00757.1
GO function: GO:0004540 - ribonuclease activity [Evidence IEA]
GO process: GO:0006401 - RNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rne/Rng family ribonuclease
translation: MKRILISTKQKDELIIAFINKKELYNIYIENINYSQNKFNIYKSKIIKIEPSLNAVFINYGYKKNGFLPIKEISNNFFLNNGYKNDNQNYYEKIKNLKKDQEILVQINKESRRNKCASFTTFISLIGTYIILIVNNPNIKGISKKIIGKNRFILKKMISNLNISKNIGFIIRTSCIGKKIEDIQLDLNLILKNWEFIKEKYIKSKCPSLIYENNNIFIKIFRDYLTPDIKEIIIDDINFFNKSKEYINILGRFEFNNKIKIYDKNISIFNYFKIESQIESIFKRKIKLSSGGSISIDSTEALTAIDINSYKSTKFTNIKETAFKTNLEAIKEIAKQLRFRDISGLIVIDFIDMFSKENNLEIENEFRKYLYLDKSKICMENISKFGLLELSRQRLNKSLNECNNICTKCNGIGFIRNYESLSLSILRFLEKKSLNKNIEEICIIVPLFIRIYLLKNKKKEIYNIKNINNKNIKLIILSNNNIRISNNFIIKIKYKNKNYINYICSKINKFNILNFNNIKNKLKNLFKLKLLGVYNINYINKKILYKNILLILIYYINKLIITY
SIO_010081: NARPIN1_RS00780
subclass of: SO_0000673
so part of: NARPIN1_RS00780
location: complement(142911..144602)
location: region:142911-144602:-1
so has part: feature:142911-144602:-1:exon

WP_130579274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142911-144602:-1:exon

NARPIN1_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00785
old locus tag: NARPIN1_01580
so part of: sequence
location: 144723..145667
location: region:144723-145667:1
so has part: feature:144723-145667:1:exon
subclass of: SO_0000010

position:144723:1
position: 144723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145667:1
position: 145667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144723-145667:1:exon

NARPIN1_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00785
old locus tag: NARPIN1_01580
inference: COORDINATES: protein motif:HMM:TIGR00005.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO process: GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RluA family pseudouridine synthase
translation: MNLIDEFKNNSIVIDYDNKDRRIDNFMFSNFRNISKSLIYKHIRIGNIKVNIKKITPKYKLKINDIIKFPNYYLDTSKKKKINLKKEEYINFFKKIIYEDDYLLIINKPYGISVHGGNNNKNIISILKCIKNNEKNLNLVHRLDKETSGILIISKKISILRNLHKQFNNNLIERKYIALVNGLWNLNNKNINISISKIKNNKGKNISILNNNGKKCSSIFKINKIFSEFTLMDIKIITGRFHQIRIHAKYCGNPIVCDKIYGFKKDNIKVNNLGLKRLFLHANYIKFFHPIYNKKICLLSNLDKELENFIKKIN
SIO_010081: NARPIN1_RS00785
subclass of: SO_0000673
so part of: NARPIN1_RS00785
location: 144723..145667
location: region:144723-145667:1
so has part: feature:144723-145667:1:exon

WP_130579276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144723-145667:1:exon

NARPIN1_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpmF
locus tag: NARPIN1_RS00790
old locus tag: NARPIN1_01590
so part of: sequence
location: 145694..145876
location: region:145694-145876:1
so has part: feature:145694-145876:1:exon
subclass of: SO_0000010

position:145694:1
position: 145694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145876:1
position: 145876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145694-145876:1:exon

NARPIN1_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpmF
locus tag: NARPIN1_RS00790
old locus tag: NARPIN1_01590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010597041.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L32
translation: MAVQKNKKSKSKSKIRRFNNIKIKNPSISIDFLSGELHLRHHITNNGFYRGKKIYSKDNK
SIO_010081: NARPIN1_RS00790
subclass of: SO_0000673
so part of: NARPIN1_RS00790
location: 145694..145876
location: region:145694-145876:1
so has part: feature:145694-145876:1:exon

WP_130579278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145694-145876:1:exon

NARPIN1_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00795
old locus tag: NARPIN1_01600
so part of: sequence
location: 145878..146846
location: region:145878-146846:1
so has part: feature:145878-146846:1:exon
subclass of: SO_0000010

position:145878:1
position: 145878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146846:1
position: 146846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145878-146846:1:exon

NARPIN1_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00795
old locus tag: NARPIN1_01600
inference: COORDINATES: protein motif:HMM:NF020680.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit delta' C-terminal domain-containing protein
translation: MYNFINDKIISNLDKFNKNIVLELNDILNLDIIIRNISKILFCTKDIKFCDSCCNCNLINTDLNSNIFIINNNINNKYFNNSNIDYEKYIIDNIFLPTINFKFKLIFIYNINLLSNNIKNLIFKKLDKDVKYIKFIFICNNINNLNFILKTKCYLIKIDNYNINYNINILKKKYNKLNYKSIITSLRLSNNSIIKSYFILNPNNWIKRIKFINLLKSNFLEKKSLIFILNLVNFNEIEIYNPIFWLLTFILDSIKYKNNFNICIKNIDSINILKIISDLFSYNILNIILDKLIEYFYIINKNINIDKSFILIKNILYIESII
SIO_010081: NARPIN1_RS00795
subclass of: SO_0000673
so part of: NARPIN1_RS00795
location: 145878..146846
location: region:145878-146846:1
so has part: feature:145878-146846:1:exon

WP_172597009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145878-146846:1:exon

NARPIN1_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00800
old locus tag: NARPIN1_01610
so part of: sequence
location: 146870..147214
location: region:146870-147214:1
so has part: feature:146870-147214:1:exon
subclass of: SO_0000010

position:146870:1
position: 146870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147214:1
position: 147214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146870-147214:1:exon

NARPIN1_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00800
old locus tag: NARPIN1_01610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874313.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine triad nucleotide-binding protein
translation: MYDINNIFYKIINGHIKSDIIYKDKIVTAFYDINPKALIHILIVTNKLISTLNDINIKDKYIIGHLIYISTKIAKMKGMSDNGYRLIINCNNYGGQEINHLHVHLLGGEKLKNL
SIO_010081: NARPIN1_RS00800
subclass of: SO_0000673
so part of: NARPIN1_RS00800
location: 146870..147214
location: region:146870-147214:1
so has part: feature:146870-147214:1:exon

WP_130579282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146870-147214:1:exon

NARPIN1_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: mnmA
locus tag: NARPIN1_RS00805
old locus tag: NARPIN1_01620
so part of: sequence
location: complement(147209..148306)
location: region:147209-148306:-1
so has part: feature:147209-148306:-1:exon
subclass of: SO_0000010

position:147209:-1
position: 147209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148306:-1
position: 148306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147209-148306:-1:exon

NARPIN1_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: mnmA
locus tag: NARPIN1_RS00805
old locus tag: NARPIN1_01620
EC number: 2.8.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499965.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0004808 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]; GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA 2-thiouridine(34) synthase MnmA
translation: MINNKKFVIVAISGGVDSAISAYILKNMGYYVEGIFMKNWNIDDNNNYCNSEEDFFYAKLISSRLNIKLNFINFSKEYWEKVFKITLDKLKLGLTPNPDILCNKEIKFNLLIKYVLNNIGANYISTGHYVKNIFFKNKNFLLKSIDKDKDQSYFLYTLNNDNLKFCLFPLGWMYKKNVRELAKKLNFENFDKKSSTGICFIGEKNFRKFISKFIPLKYGNIITSDNINIGTHNGIHFYTIGQRYGLNIGGIKKYLSKPWYIIDKNVINNTIIVSQDKNHPNLLSKGLIANSVNLINEIKNIYRLDIEVKLRYSKNTMKSKIEFINNNKVKIIFNKLYGIVVPGQSVVFYINEICIGGAIIESNIL
SIO_010081: NARPIN1_RS00805
subclass of: SO_0000673
so part of: NARPIN1_RS00805
location: complement(147209..148306)
location: region:147209-148306:-1
so has part: feature:147209-148306:-1:exon

WP_130579284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147209-148306:-1:exon

NARPIN1_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00810
old locus tag: NARPIN1_01640
so part of: sequence
location: 148467..148555
location: region:148467-148555:1
so has part: feature:148467-148555:1:exon
subclass of: SO_0000663

position:148467:1
position: 148467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148555:1
position: 148555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148467-148555:1:exon

NARPIN1_RS00810
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00810
old locus tag: NARPIN1_01640
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:148501..148503,aa:Ser,seq:gga)
SIO_010081: NARPIN1_RS00810
subclass of: SO_0000673
so part of: NARPIN1_RS00810
location: 148467..148555
location: region:148467-148555:1
so has part: feature:148467-148555:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148467-148555:1:exon

NARPIN1_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: murJ
locus tag: NARPIN1_RS00815
old locus tag: NARPIN1_01650
so part of: sequence
location: 148581..150098
location: region:148581-150098:1
so has part: feature:148581-150098:1:exon
subclass of: SO_0000010

position:148581:1
position: 148581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150098:1
position: 150098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148581-150098:1:exon

NARPIN1_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: murJ
locus tag: NARPIN1_RS00815
old locus tag: NARPIN1_01650
inference: COORDINATES: protein motif:HMM:TIGR01695.1
GO process: GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: murein biosynthesis integral membrane protein MurJ
translation: MNIIKNLVLIGITTSLSRTLGFVRDVIIARMFGASDITDSFFISFKLINFLRKILIEGSFFQVFIPILSEYKKNKNINEIKDFLSCTIGLIMLLLIIITIIGILFSPTILKIFAPNINSNIKFNLTNKIFRIIFPYIIISTLSMLVSSVLNMWDNFIVPSLSLSFINIIIILFSIFSNKISNPPILSLAWSILIGNIFQLIYQLKYINDIDMIIIPTISLKNSGLKKLINNIWLALLSTSINQISMISNTIFTSFLPSGSISWMYYADKIIEFPSGIIISTLNTILLPYLSKSAINNDKNEYSKFLDIGLRLSILISLPITIILIVLSKLIIFSIFKYGKFSYFDALMTSQSLIAYSIGLIGIILVKILTPSFYSYQDNVTPLKISIITFIITQILNFIFITTLKHIGLSLSIGLSACFNSLLLYIYLIKNNLFKPKLGWKKFIYKIVISSINMLLILIIFIKILNYIKNNLIYRLLKLIFLIAIGIITYILSLKLFNFNINDII
SIO_010081: NARPIN1_RS00815
subclass of: SO_0000673
so part of: NARPIN1_RS00815
location: 148581..150098
location: region:148581-150098:1
so has part: feature:148581-150098:1:exon

WP_130579287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148581-150098:1:exon

NARPIN1_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: argS
locus tag: NARPIN1_RS00820
old locus tag: NARPIN1_01660
so part of: sequence
location: complement(150104..151852)
location: region:150104-151852:-1
so has part: feature:150104-151852:-1:exon
subclass of: SO_0000010

position:150104:-1
position: 150104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151852:-1
position: 151852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150104-151852:-1:exon

NARPIN1_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: argS
locus tag: NARPIN1_RS00820
old locus tag: NARPIN1_01660
EC number: 6.1.1.19
inference: COORDINATES: protein motif:HMM:TIGR00456.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginine--tRNA ligase
translation: MINIYNKIYNKIYKLIKNSNFKDIKDKIIITNSLNIDIYHIKINGIQFFIKKFNLKEEEILNNLKIELLKLSFIYKINIDNDFINIFINNNYIEKKIVKIIKSNKLIFKLNKISKNIIIDYSSPNLMKEMHVGHLKSTIIGDSLSKILKFLGNNIIKINHVGDWGINFGMTICKIIELNKHKDLTIKKISIDEIENIYKISKLDYKNNLSFAEKSQICLLKLQNKNNLYNKIWKILTKISIKNNQYIYKELNIDLKINNIIGESFYKNMIPNVINDLLKKNIAKNKNGLILIPLKNTKNRYGKKMCAIIQKKNNTHLYLTTEITSIKYRCEFFKPYKIIYFIDKRQSNHFKQSFYIAKKAKYITNSKLEFHSFGMILNKDKKPLKTREGDSFKLKELIKESIEKTKIFLLNKNKNLNINEINKLSKIIGIGSLKYFDLSRNKNNNYIFDIDKILSLKDNTAIYIYYSYVRILSILKKNKINNLNYLSYKNFKINNKEELDLSLLIIKFEFIIHKVSKLCTPNLLCLYLYEISKKFSKFYSTDKIIYINNIDIKNTKLNLCILTSNIIKKGLELLGIKIIKKI
SIO_010081: NARPIN1_RS00820
subclass of: SO_0000673
so part of: NARPIN1_RS00820
location: complement(150104..151852)
location: region:150104-151852:-1
so has part: feature:150104-151852:-1:exon

WP_130579289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150104-151852:-1:exon

NARPIN1_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rnhA
locus tag: NARPIN1_RS00825
old locus tag: NARPIN1_01670
so part of: sequence
location: complement(151836..152309)
location: region:151836-152309:-1
so has part: feature:151836-152309:-1:exon
subclass of: SO_0000010

position:151836:-1
position: 151836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152309:-1
position: 152309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151836-152309:-1:exon

NARPIN1_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rnhA
locus tag: NARPIN1_RS00825
old locus tag: NARPIN1_01670
EC number: 3.1.26.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005720058.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease HI
translation: MNIINVFTDGSCTNNPGPGGYGIIIKYNNNIFKFSSGYYFTTNNRMELIAVIKSLEILKNFKKININLDSLYVKNGITIWINNWIKNNWRSSKNKIIKNIDLWKKLYLLSNNYILNWNWIKSHSNCIENNICDKLAKDASINPKNHDLILNKYDKYI
SIO_010081: NARPIN1_RS00825
subclass of: SO_0000673
so part of: NARPIN1_RS00825
location: complement(151836..152309)
location: region:151836-152309:-1
so has part: feature:151836-152309:-1:exon

WP_130579291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151836-152309:-1:exon

NARPIN1_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: dnaQ
locus tag: NARPIN1_RS00830
old locus tag: NARPIN1_01680
so part of: sequence
location: 152355..153071
location: region:152355-153071:1
so has part: feature:152355-153071:1:exon
subclass of: SO_0000010

position:152355:1
position: 152355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153071:1
position: 153071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152355-153071:1:exon

NARPIN1_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: dnaQ
locus tag: NARPIN1_RS00830
old locus tag: NARPIN1_01680
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499954.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit epsilon
translation: MLLKRIVLDIETTGINKYNKYYYIGHKIIEIGAIEITNFNITNNKFHSYINPNRNVDKEAYNIHGIDNKLLYNKPLFSDIVDNFIKFIYKSELIIHNAKFDISFINYELNLINYKISNIKSICNIIDTLSLARKKFPGKKNNLDSLCDRFNINRENRNFHGALIDAILLAKVFLLLIKKQSKILFETENSKKYDIILYKNNNNINYKLENLIILKANKKELNNHINLLNFIKIKYLNK
SIO_010081: NARPIN1_RS00830
subclass of: SO_0000673
so part of: NARPIN1_RS00830
location: 152355..153071
location: region:152355-153071:1
so has part: feature:152355-153071:1:exon

WP_130579293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152355-153071:1:exon

NARPIN1_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00835
old locus tag: NARPIN1_01690
so part of: sequence
location: 153075..153148
location: region:153075-153148:1
so has part: feature:153075-153148:1:exon
subclass of: SO_0000663

position:153075:1
position: 153075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153148:1
position: 153148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153075-153148:1:exon

NARPIN1_RS00835
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00835
old locus tag: NARPIN1_01690
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:153109..153111,aa:Asp,seq:gtc)
SIO_010081: NARPIN1_RS00835
subclass of: SO_0000673
so part of: NARPIN1_RS00835
location: 153075..153148
location: region:153075-153148:1
so has part: feature:153075-153148:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153075-153148:1:exon

NARPIN1_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: lon
locus tag: NARPIN1_RS00840
old locus tag: NARPIN1_01700
so part of: sequence
location: 153255..155597
location: region:153255-155597:1
so has part: feature:153255-155597:1:exon
subclass of: SO_0000010

position:153255:1
position: 153255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155597:1
position: 155597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153255-155597:1:exon

NARPIN1_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: lon
locus tag: NARPIN1_RS00840
old locus tag: NARPIN1_01700
EC number: 3.4.21.53
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014354381.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endopeptidase La
translation: MKNEVLINEEKKSIENTKKIPVLPLRDIVIYPNMIVPLFVGREKSIKSIEISIKSDKKLVLLTQKNNLNESPKVEDLFKVGTLSHILQMFKLNDGTIKVLIEGIYRASILDIEDNGNYITANIKNISIVKKIDKEDIFIKIIINQFETYIKLSKKLSIDILISLNEINDISKLVDTIAAHLPIKLNNKQKILEIVDINERINFLIKLIEYEIELLQIEKKIKNRIRKQMEKSQKEYYLNEQIKAIQKELNNINNTNDEYKILKDKINISGMNKDVKIKVENELQKLKMMSPISAEASVIRGYIDWMISMPWKKRNRLKKNINFAQNILDKNHYGLNKVKEYILEYLAVQNRVNKIKGPILCLVGPPGVGKTSLGKSIAKATGRKYVKISLGGIKDEAEIRGHRKTYIGSMPGKLIQKMSKVGVKNPLFLLDEIDKMSFDMRGDPASALLEALDSEQNAYFNDNYLEVDYDLSEVMFVATSNSTEIPTTLLDRMEIIKLHGYSEEEKLNIANNFLLKKQIKINALKDYEIEFDNSSILSIIRYYTKESGVRNLEREISKICRKVVKILLVNKKIKSILINENNIVDFLGIKKFDFGKFEDNLSVGQTIGLAWTEYGGDLLTIESYCVPGRGKLINTGSLGKVMCESIQTALTVAKFKVNKFIVRDYKFYEINDIHVHVPECSTPKDGPSAGVAICLSIISCLINKPIKSGIAITGEITLNGKVLPIGGLKEKILAAKRGNIKYILIPKNNLKDLKEIEIDITDLNIIGISDIEEVINISLI
SIO_010081: NARPIN1_RS00840
subclass of: SO_0000673
so part of: NARPIN1_RS00840
location: 153255..155597
location: region:153255-155597:1
so has part: feature:153255-155597:1:exon

WP_130579295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153255-155597:1:exon

NARPIN1_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00845
old locus tag: NARPIN1_01710
so part of: sequence
location: 155599..156312
location: region:155599-156312:1
so has part: feature:155599-156312:1:exon
subclass of: SO_0000010

position:155599:1
position: 155599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156312:1
position: 156312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155599-156312:1:exon

NARPIN1_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00845
old locus tag: NARPIN1_01710
inference: COORDINATES: protein motif:HMM:NF013718.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatase PAP2 family protein
translation: MFFIIKINFLYSLFIILLFIILNLHNYNWKPIISNKIILNLIFYILRLINLDIFILILFIVSLLLLYFLNKKNIIKIKYILIFNLTKLLLNQFIKILLKNIYKIPRPYILYINNKLNININEFIILFESKKINLFYKLFDSILNIDNRINLIYNYYSVISGHVLLLLNIYDIYSFMFYINNKYNIFLIFSIINILLIYSRLILGMHFFIDIIFSILLNFISSLLIILFQKLIFKIKY
SIO_010081: NARPIN1_RS00845
subclass of: SO_0000673
so part of: NARPIN1_RS00845
location: 155599..156312
location: region:155599-156312:1
so has part: feature:155599-156312:1:exon

WP_130579297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155599-156312:1:exon

NARPIN1_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00850
old locus tag: NARPIN1_01720
so part of: sequence
location: 156363..156434
location: region:156363-156434:1
so has part: feature:156363-156434:1:exon
subclass of: SO_0000663

position:156363:1
position: 156363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156434:1
position: 156434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156363-156434:1:exon

NARPIN1_RS00850
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00850
old locus tag: NARPIN1_01720
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:156395..156397,aa:Asn,seq:gtt)
SIO_010081: NARPIN1_RS00850
subclass of: SO_0000673
so part of: NARPIN1_RS00850
location: 156363..156434
location: region:156363-156434:1
so has part: feature:156363-156434:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156363-156434:1:exon

NARPIN1_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00855
old locus tag: NARPIN1_01730
so part of: sequence
location: 156442..156514
location: region:156442-156514:1
so has part: feature:156442-156514:1:exon
subclass of: SO_0000663

position:156442:1
position: 156442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156514:1
position: 156514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156442-156514:1:exon

NARPIN1_RS00855
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00855
old locus tag: NARPIN1_01730
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:156475..156477,aa:His,seq:gtg)
SIO_010081: NARPIN1_RS00855
subclass of: SO_0000673
so part of: NARPIN1_RS00855
location: 156442..156514
location: region:156442-156514:1
so has part: feature:156442-156514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156442-156514:1:exon

NARPIN1_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00860
old locus tag: NARPIN1_01740
so part of: sequence
location: 156565..156638
location: region:156565-156638:1
so has part: feature:156565-156638:1:exon
subclass of: SO_0000663

position:156565:1
position: 156565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156638:1
position: 156638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156565-156638:1:exon

NARPIN1_RS00860
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00860
old locus tag: NARPIN1_01740
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:156599..156601,aa:Pro,seq:tgg)
SIO_010081: NARPIN1_RS00860
subclass of: SO_0000673
so part of: NARPIN1_RS00860
location: 156565..156638
location: region:156565-156638:1
so has part: feature:156565-156638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156565-156638:1:exon

NARPIN1_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: gltX
locus tag: NARPIN1_RS00865
old locus tag: NARPIN1_01750
so part of: sequence
location: complement(156644..158050)
location: region:156644-158050:-1
so has part: feature:156644-158050:-1:exon
subclass of: SO_0000010

position:156644:-1
position: 156644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158050:-1
position: 158050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156644-158050:-1:exon

NARPIN1_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: gltX
locus tag: NARPIN1_RS00865
old locus tag: NARPIN1_01750
EC number: 6.1.1.17
inference: COORDINATES: protein motif:HMM:TIGR00464.1
GO component: GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO function: GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate--tRNA ligase
translation: MKNINTRFAPSPTGNLHIGNIRIAIYSWLFSKKYNGNFFLRIENTKEKNSFYINKIIYQLKWLKISWNKKIIYQSNRNKKYEKIIKLMIKNNKAYYCFCSKERLKNIKETQILNKEKPKYDKLCRNLNYKTIYNNIKNNKKFVIRFKNPDKNYTYFNDLIYGNLKFNNKELDDLIIKKSNGYFTYNFCSTVDDFYMKITHIIRGNDHISNTPRQINILKSLNCKIPKYIHVPITLDINKNKISKHNNNYNIEELIKEGFLYESILHFITNPNIINNIINIKYIINNFNINKISKSSIIFDKKKLLYINKLYISKLSIYKIRKRIFFYLKYTNNKFIINKNINKILKIFKNRFSTFNELFIITKYIFYNNNINIQEIYLYINSNKELIEIITKFLKNINNITIWRISNIKNIINKLLKNKNINIKKKFYFIIRKLISGVDKTPELYYIIYLIGKKNTIERINLIINYYL
SIO_010081: NARPIN1_RS00865
subclass of: SO_0000673
so part of: NARPIN1_RS00865
location: complement(156644..158050)
location: region:156644-158050:-1
so has part: feature:156644-158050:-1:exon

WP_130579299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156644-158050:-1:exon

NARPIN1_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00870
old locus tag: NARPIN1_01760
so part of: sequence
location: 158133..158206
location: region:158133-158206:1
so has part: feature:158133-158206:1:exon
subclass of: SO_0000663

position:158133:1
position: 158133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158206:1
position: 158206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158133-158206:1:exon

NARPIN1_RS00870
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00870
old locus tag: NARPIN1_01760
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:158167..158169,aa:Val,seq:tac)
SIO_010081: NARPIN1_RS00870
subclass of: SO_0000673
so part of: NARPIN1_RS00870
location: 158133..158206
location: region:158133-158206:1
so has part: feature:158133-158206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:158133-158206:1:exon

NARPIN1_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00875
old locus tag: NARPIN1_01770
so part of: sequence
location: 158211..158284
location: region:158211-158284:1
so has part: feature:158211-158284:1:exon
subclass of: SO_0000663

position:158211:1
position: 158211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158284:1
position: 158284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158211-158284:1:exon

NARPIN1_RS00875
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00875
old locus tag: NARPIN1_01770
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:158245..158247,aa:Lys,seq:ttt)
SIO_010081: NARPIN1_RS00875
subclass of: SO_0000673
so part of: NARPIN1_RS00875
location: 158211..158284
location: region:158211-158284:1
so has part: feature:158211-158284:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:158211-158284:1:exon

NARPIN1_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: ligA
locus tag: NARPIN1_RS00880
old locus tag: NARPIN1_01780
so part of: sequence
location: complement(158293..160056)
location: region:158293-160056:-1
so has part: feature:158293-160056:-1:exon
subclass of: SO_0000010

position:158293:-1
position: 158293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160056:-1
position: 160056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158293-160056:-1:exon

NARPIN1_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: ligA
locus tag: NARPIN1_RS00880
old locus tag: NARPIN1_01780
EC number: 6.5.1.2
inference: COORDINATES: protein motif:HMM:NF005932.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent DNA ligase LigA
translation: MNNKNIENIIYNLRKKIISLEYRYFILNKIKISDYEYDLLLKKLKYLEDKYPEYKTKNSPTIKINNFILNLRDNIKHFNIMLSLKTIYSFEEYNKFINKINNKLNLINKIEYCCEYKLDGLAANLIYKKGILISISTRGNGLYGESIYHNIDNINGIPKKLNKKFLLPNLVEIRGEICISNKEFFNFNKKLKLKNKKTFSNSRNAASGLARQKKNNSIKNNILNFFCYGLGKITNKNSIFNNNSQFEILNILNNLGFNYKNKYKKFNNIDSIYKYYLNLKKNRHKLKYSIDGLVVKIDSINLQNKLGLSSKFPNWAVAYKFPSEEAVTYVKNIYFDITKTGTLIPIAEINEVIISGVLIKKIYLNNINKMIKLNINIGDKILIKRSGDVIPTIKNVIEKKNNKIINIPENCPSCNSKIENINNILKCSYSFFCKSQINNKINHFFSKDCNFAKGLGKKTINIINKYIKINSPIDLYNLNINNLLLIPNIKFKKANNILNSLEISKNTTLYKFIYSLGINNIGKKTSIKLSLKYNNILKLIKEYKNDYINNKLNINKNEFNSLNNFMNNKINIDLIYKLTNYLNIKNN
SIO_010081: NARPIN1_RS00880
subclass of: SO_0000673
so part of: NARPIN1_RS00880
location: complement(158293..160056)
location: region:158293-160056:-1
so has part: feature:158293-160056:-1:exon

WP_130579301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158293-160056:-1:exon

NARPIN1_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00885
old locus tag: NARPIN1_01790
so part of: sequence
location: 160104..160802
location: region:160104-160802:1
so has part: feature:160104-160802:1:exon
subclass of: SO_0000010

position:160104:1
position: 160104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160802:1
position: 160802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160104-160802:1:exon

NARPIN1_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00885
old locus tag: NARPIN1_01790
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIKKKYYGTAVILCDEYNNLFNKKIFNKYKEIIFLKKKFKFILNQFKINFFKVNKYIGNIEFKKKIKNIIYILENKNILYKSILMIKNNSFNSVKSLILTLNNEFNKENDVEYNNNLIYIGNFIINVIFNNLILNKYINNNENSILLVKNISLLYIIKFIFLNVKYILIEDNYFTNNFKKKYIFFNNEYIFLKVKNIFNFIKNGDFLIIDYLLKKIYINPSSLKIKQIYNT
SIO_010081: NARPIN1_RS00885
subclass of: SO_0000673
so part of: NARPIN1_RS00885
location: 160104..160802
location: region:160104-160802:1
so has part: feature:160104-160802:1:exon

WP_130579303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160104-160802:1:exon

NARPIN1_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: tkt
locus tag: NARPIN1_RS00890
old locus tag: NARPIN1_01800
so part of: sequence
location: 160876..162861
location: region:160876-162861:1
so has part: feature:160876-162861:1:exon
subclass of: SO_0000010

position:160876:1
position: 160876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162861:1
position: 162861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160876-162861:1:exon

NARPIN1_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: tkt
locus tag: NARPIN1_RS00890
old locus tag: NARPIN1_01800
EC number: 2.2.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011126779.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004802 - transketolase activity [Evidence IEA]
GO process: GO:0006098 - pentose-phosphate shunt [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transketolase
translation: MILRNILSNALRILSMDMVENAKSGHPGAPMGMSDIFEVLWRDFINHNPKNPKWINRDRFVLSNGHCSALLYSVLHLTGYNISISDLKNFRKLNSKTPGHPEYSHTEGIEVTTGPLGQGLANAVGFAIAEKTLSSQFNKNNFNIINHNTYVFVGDGCLMEGISHEVCSLAGKLKLNKLIVFYDKNNVSIDGNTENWFIDDTKNRFLSYDWNVININGHDSKSIFNSIYNAKKSNKPNLIICNTLIGYGSPNKCGDYKIHGTPLGKEESINTRKFLNWNYEPFYIPKEIYNEWNSVKVGIKKENNWNKMLFKYKLKFPELFNELNRRINKELPKDWNEYNEKIISDIKNNLENISTRKASQNVIEKFVSKLPELIGGSSDLTSSVLTNCSKSIPIDKFSYGNYINYGVREFGMTAINNGISIYNGFIPYGGTFLSFMDYAKSAVRMSALMKLRSIHIYSHDSVFIGEDGPTHQPVEQLDSLRLIPNLHIWRPFNQIETVIAWKYAIERLDGPTALILSRQNIYSNNLLINNIFNIYKGGYIVKSCNEYPDITIISTGSEIELSYNLYILLSKKKIKTRLVSIPSTSVFDLQNKSYYYDVLPKKSKKIIIEASYSNFWYKYLENNGKIIGIKTFGKSGSIDELHEYFGFKESNIFNDIKNLFN
SIO_010081: NARPIN1_RS00890
subclass of: SO_0000673
so part of: NARPIN1_RS00890
location: 160876..162861
location: region:160876-162861:1
so has part: feature:160876-162861:1:exon

WP_130579305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160876-162861:1:exon

NARPIN1_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00895
old locus tag: NARPIN1_01810
so part of: sequence
location: 162982..164262
location: region:162982-164262:1
so has part: feature:162982-164262:1:exon
subclass of: SO_0000010

position:162982:1
position: 162982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164262:1
position: 164262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162982-164262:1:exon

NARPIN1_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00895
old locus tag: NARPIN1_01810
EC number: 5.2.1.8
inference: COORDINATES: protein motif:HMM:NF025010.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidylprolyl isomerase
translation: MNKLLLIVYVFLFGFSNLNCKCKTVDEIVAVVNNLVILKSELNNFKKLIELDGSFKKEVDNSKLDNILLNQLIIDKMSYQIALEKNILVNNSDVNRFIENIANQNSISKDVFLKRISLNNININYYKDFIKRKITNNILYNKEIRKLIDVTDKEILDMYKNIDSNKILDLFTSYDFYEIYVPFNEKSKLNININNKSFINNLLFMLKNNYSLDIIKKFINVYNKNVKINEYKDIKLKNLNSIYIPYFNKINKEKFVVDPIVVDNNMYLIKINKIHKENFSRLVNEVNISNILIKDKDLTKEIKDKVDSIYKDIKNNKISFSEAAKKYSEDNVSSNNGGNVGWYIINIYNKDFINEINKLKIGEISKPFFSNKSWNLIKLVNTRNVKYGEFIKKKYIYEYIFNKKFSKELEQWIENNKKLTYIKIYN
SIO_010081: NARPIN1_RS00895
subclass of: SO_0000673
so part of: NARPIN1_RS00895
location: 162982..164262
location: region:162982-164262:1
so has part: feature:162982-164262:1:exon

WP_130579307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162982-164262:1:exon

NARPIN1_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rsmA
locus tag: NARPIN1_RS00900
old locus tag: NARPIN1_01820
so part of: sequence
location: 164293..165075
location: region:164293-165075:1
so has part: feature:164293-165075:1:exon
subclass of: SO_0000010

position:164293:1
position: 164293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165075:1
position: 165075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164293-165075:1:exon

NARPIN1_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rsmA
locus tag: NARPIN1_RS00900
old locus tag: NARPIN1_01820
EC number: 2.1.1.182
inference: COORDINATES: protein motif:HMM:NF012616.2
GO function: GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
translation: MRNNKFDQIFLKDINIINFIIKNINPKYYQNIVEIGPGLGSITLPIIKYLNLLTLIEIDKNISNKLIRLLNINSNKIILYNEDARFFNYNKLIKNKYDKLRIFGNLPYNNSLLIIINCIKYYNIIHDIHFMIQRELSEKLISNKLCKSNILIRCFFNINIIYKNIHPNSFYPKPKVYSSIIKIIPKKKNLSIKYLFFLKKISRILFCNKRKIIKNNLKNLFNINNLILLEKLNFINLNLRAENLSINQFIKLLFFYLKNK
SIO_010081: NARPIN1_RS00900
subclass of: SO_0000673
so part of: NARPIN1_RS00900
location: 164293..165075
location: region:164293-165075:1
so has part: feature:164293-165075:1:exon

WP_130579309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164293-165075:1:exon

NARPIN1_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: ileS
locus tag: NARPIN1_RS00905
old locus tag: NARPIN1_01830
so part of: sequence
location: complement(165086..167896)
location: region:165086-167896:-1
so has part: feature:165086-167896:-1:exon
subclass of: SO_0000010

position:165086:-1
position: 165086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167896:-1
position: 167896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165086-167896:-1:exon

NARPIN1_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: ileS
locus tag: NARPIN1_RS00905
old locus tag: NARPIN1_01830
EC number: 6.1.1.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070098.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isoleucine--tRNA ligase
translation: MNKNYKNTLNLPKTLFPMKGNLIKNEIKILYKWNKNNIYDLIQKSKLNKKIFLLHDGPPYANGNIHMGHALNKIIKDIIIKSKNLSGMNAPYIVGWDCHGLPIESKIENINNEKINKKEFRLKCRKYVIQQIDIQKSDFIRLGIFADWKNSYLTMNFKTISNIIKIFGKLVKLNYIKSGIKPIYWCINCKSVLSESEIIYKNITSKSLYIKFYIKNINYANKILNIDNYKVSLVIWTTTPWTLPDNEAISINPNIYYNLIEYNDEIIILSCNSLNNFIKENNIKNFINIKKILGKYILNFMCINPINNNTVPVIFDESINIEFGTGIVHIAPGHGQTDYEIGLKFNLNIKNSINKYGYYNDNTHKLLDKKFIFDSILDIINILKENNSLLFIKNYIHKYAFCYRHNYKIIFRVTNQWFIDLENNNLKNNIINEINKIRWIPKWGKNYIKEMIIKRKEWCISRQRNWGIPITLIINKYNNKLHPDIDIIIEKISNIIEKYGIQSWWDINLCELTENYKDYVKVYDVLDVWFDSGTTFFSVVKDIDKFKDKNYIDLCVEGIDQYRGWFMSSLLISIALNNKSSYKNILTHGFVIDKNKKKMSKSIGNIINPNELIKKFGSDIIRLWVSSSDYKKNISVSYEILDRVSDNYKKIRNTIRFLLSNLYDFDYNKDYINYENMVQIDLWILKKTYFLQKKIIYLYNSYNFCNVLDHIINFCSVDLSSNYLEIIKDRQYTLGKDSIPRRSCQTSIFYILESLVRWISPILSFTSEEIWEYIPGNRSKSIFTEEWFNKLKNINKYKILSNKIWNFIFNIKNEINKKIEIIKKHKVINSNLELHIYLYLDKYLFNEIKLLKNELHYIFITSKVTINKIENFPEKIKDFIHIGNNKIFLDKINGIKCNRCWHLCEVNNKINYKKEDYICNRCFNNMNNINEIRKFV
SIO_010081: NARPIN1_RS00905
subclass of: SO_0000673
so part of: NARPIN1_RS00905
location: complement(165086..167896)
location: region:165086-167896:-1
so has part: feature:165086-167896:-1:exon

WP_130579311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165086-167896:-1:exon

NARPIN1_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsT
locus tag: NARPIN1_RS00910
old locus tag: NARPIN1_01840
so part of: sequence
location: 168015..168281
location: region:168015-168281:1
so has part: feature:168015-168281:1:exon
subclass of: SO_0000010

position:168015:1
position: 168015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168281:1
position: 168281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168015-168281:1:exon

NARPIN1_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsT
locus tag: NARPIN1_RS00910
old locus tag: NARPIN1_01840
inference: COORDINATES: protein motif:HMM:TIGR00029.2
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S20
translation: MLVNKDLKKIKNKYKKNELINNSKKSIIKNFIRKINIYLLDNNKEELKKIFIKFQSYIDSQSSKRLIHKNKVSRYKSRIMKKINNLTI
SIO_010081: NARPIN1_RS00910
subclass of: SO_0000673
so part of: NARPIN1_RS00910
location: 168015..168281
location: region:168015-168281:1
so has part: feature:168015-168281:1:exon

WP_130579313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168015-168281:1:exon

NARPIN1_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00915
old locus tag: NARPIN1_01850
so part of: sequence
location: 168295..169536
location: region:168295-169536:1
so has part: feature:168295-169536:1:exon
subclass of: SO_0000010

position:168295:1
position: 168295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169536:1
position: 169536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168295-169536:1:exon

NARPIN1_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00915
old locus tag: NARPIN1_01850
inference: COORDINATES: protein motif:HMM:NF013871.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIYLVGGAIRNRFLFLPVKEKDWVVVGSSSEEMLKLGFKKVGKFFPVFIHPISNEEYALARTEIKIGHGHNGFDCFSLNVSIEEDLYRRDITINAIAEDKNGKIIDPYFGIKDIENKLIKHISNNFKDDPLRVLRVARFYSYLYHLKFKIFDETLNLMKLIVKSGELSYLSSERILQEIKKSMLTKNPEFFFYILNKCKALYCILPEFFNLLDINSDKIKNFYKILKVIKKIKYLNLDFILRFYSLIYILIIYKINELKLKNFKINYSKFILNKKNIIISIFNRFNLSKKLKIFAIKIIDNIFLINKIELLNEYKIVKLFHDLNINKNIKNLFFLIQITFIYKDIRIFFIDKNNNLYNKNKYMIKIWKIINSVDIKKIIKNINNYKNTKEIIINEQVNTLKKWIKVNNFKSI
SIO_010081: NARPIN1_RS00915
subclass of: SO_0000673
so part of: NARPIN1_RS00915
location: 168295..169536
location: region:168295-169536:1
so has part: feature:168295-169536:1:exon

WP_130579315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168295-169536:1:exon

NARPIN1_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: tsaD
locus tag: NARPIN1_RS00920
old locus tag: NARPIN1_01860
so part of: sequence
location: complement(169543..170547)
location: region:169543-170547:-1
so has part: feature:169543-170547:-1:exon
subclass of: SO_0000010

position:169543:-1
position: 169543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170547:-1
position: 170547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169543-170547:-1:exon

NARPIN1_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: tsaD
locus tag: NARPIN1_RS00920
old locus tag: NARPIN1_01860
EC number: 2.3.1.234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070275.1
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
translation: MKILGIETSCDETGVSIYDSNNGVIFNKTYSSKKIHSKYGGVIPELASKNHIINIIKIINNIYKKNFYKNIDKIAYTAGPGLFSSLIIGATIGSTLAYSWNIDSIPINHLEGHILSPFIETNNIKFPFVSLLISGGNTQLIYSNKLGKYKIIGKTVDDAVGEVYDKIANILGINYPGGKEISNLAKYGRNIYKFPRPMINNNKYKLNFSFSGLKTHIYKLIKKNNNINYQTKCDIALEFENSVIDILLKKCELSIIKTKSKILTVSGGVVSNKNIRNKLLSLENKLKIKVLFPNRKYFTDNGAMIAYVGYLKSNIIKNNKLNIFVNNKWSLEDI
SIO_010081: NARPIN1_RS00920
subclass of: SO_0000673
so part of: NARPIN1_RS00920
location: complement(169543..170547)
location: region:169543-170547:-1
so has part: feature:169543-170547:-1:exon

WP_130579317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169543-170547:-1:exon

NARPIN1_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsU
locus tag: NARPIN1_RS00925
old locus tag: NARPIN1_01870
so part of: sequence
location: 170636..170806
location: region:170636-170806:1
so has part: feature:170636-170806:1:exon
subclass of: SO_0000010

position:170636:1
position: 170636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170806:1
position: 170806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170636-170806:1:exon

NARPIN1_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsU
locus tag: NARPIN1_RS00925
old locus tag: NARPIN1_01870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005295814.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S21
translation: MPFIKISNNEPFELALRRFKRLCEKSGILSEIKKREFYEKPSTKRKKIKDSLKKKK
SIO_010081: NARPIN1_RS00925
subclass of: SO_0000673
so part of: NARPIN1_RS00925
location: 170636..170806
location: region:170636-170806:1
so has part: feature:170636-170806:1:exon

WP_130579319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170636-170806:1:exon

NARPIN1_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: dnaG
locus tag: NARPIN1_RS00930
old locus tag: NARPIN1_01880
so part of: sequence
location: 170825..172543
location: region:170825-172543:1
so has part: feature:170825-172543:1:exon
subclass of: SO_0000010

position:170825:1
position: 170825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172543:1
position: 172543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170825-172543:1:exon

NARPIN1_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: dnaG
locus tag: NARPIN1_RS00930
old locus tag: NARPIN1_01880
inference: COORDINATES: protein motif:HMM:TIGR01391.1
GO function: GO:0003896 - DNA primase activity [Evidence IEA]
GO process: GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA primase
translation: MIFYYKKISKFLIKEILDKTNLLNLIKSKISVKKVGNSFFSLCPFHKERKPSFSINKIDKFYYCFGCGISGNSIKFLMDFNKLSFIESIKELSLINNINIDLKEKNINNKNIKYIKLLEEISHIYYENLRKKFNEKLKTFFIIKKWSFSIIKKFNIGYSSNNIISNLFINNKEKLLLLEKLSIIKKINNKYIDILNNRIIFPISNNYGDIISFGGRTLINDKYKYINCSNNFLFKKRYTLYGLDKILNKNNFVEKLLIVEGYSDVISLTNFGINFSIASLGTSLTYEHIKIIFKITNNIIFCYDSDIPGIKSYYRILIKIINFITDEKVVKFIKLPNNEDPDSFIRKFGVNEFNKFINNSKNFYDLLFEFIKKDIYISDINGKIKFIKKILFYTNRIPGNLTKKLIKKELISKLLLTNRLNLLKVINYNFNYKKHKLTILQKIISLLLQNIKLYRLFYIPYNIKCMYFNFKLLINIVDLCKKNNNINFNKIIYLHKYNYLYSYLYFLYKIDDNIINYKILDEIFLEILNKFYILFLKKIQKYLIYKSKKNDLNKYEKKKIWLLNIELSKLSL
SIO_010081: NARPIN1_RS00930
subclass of: SO_0000673
so part of: NARPIN1_RS00930
location: 170825..172543
location: region:170825-172543:1
so has part: feature:170825-172543:1:exon

WP_130579321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170825-172543:1:exon

NARPIN1_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpoD
locus tag: NARPIN1_RS00935
old locus tag: NARPIN1_01890
so part of: sequence
location: 172569..174278
location: region:172569-174278:1
so has part: feature:172569-174278:1:exon
subclass of: SO_0000010

position:172569:1
position: 172569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174278:1
position: 174278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172569-174278:1:exon

NARPIN1_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpoD
locus tag: NARPIN1_RS00935
old locus tag: NARPIN1_01890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014498672.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoD
translation: MNINNNCKLKLLINKLKNKSNIKLSYIYKHIDNVSNEIIKEIENMNINIINDVDINNNINYKLKSDINNSNTNNIINTEDPVKIYMKEMGLVNLLDKNDEINISKKIENSYNKIYSNITEYTNIFIYIFNRYENVKSKKIKLSEFLSGLNYIDNKKEFFIKNIKYENDDIDFKLVNKKIINLKNQFNIVNNLIKENGRYDNKSIIEINNLFNIFKQIKLSKNELNNIVNIISDINNDILEKEQYIKYLLINKCNISNNIFEYLYKNKKIDFIWLEKEINSNNKWSKKLKKFNNEIFKTICYLKNLEKNVGLNIDHIKNINKNIIINLYKLKNLKNKMVKANLRLVISISKKYLNRGLQFLDLIQEGNIGLMKAVDKFQYKRGYKFSTYATWWIRQSITRSIADNARTIRIPVHMIETINKLNRISRKIIQEFGREPTYEELSNKMLISEDKIRKIMKIAKEPISMETPIGEEDTNIGDFIEDTSLTLPIEEATSESLKLVTNNILSTLTAREEKVLRMRFGIDMKSDHTLEEVGKKFNVTRERIRQIEAKALKKLRHPSRSDILKEFLD
SIO_010081: NARPIN1_RS00935
subclass of: SO_0000673
so part of: NARPIN1_RS00935
location: 172569..174278
location: region:172569-174278:1
so has part: feature:172569-174278:1:exon

WP_130579324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172569-174278:1:exon

NARPIN1_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00940
old locus tag: NARPIN1_01900
so part of: sequence
location: complement(174285..174357)
location: region:174285-174357:-1
so has part: feature:174285-174357:-1:exon
subclass of: SO_0000663

position:174285:-1
position: 174285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174357:-1
position: 174357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174285-174357:-1:exon

NARPIN1_RS00940
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00940
old locus tag: NARPIN1_01900
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(174322..174324),aa:Ile,seq:cat)
SIO_010081: NARPIN1_RS00940
subclass of: SO_0000673
so part of: NARPIN1_RS00940
location: complement(174285..174357)
location: region:174285-174357:-1
so has part: feature:174285-174357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174285-174357:-1:exon

NARPIN1_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00945
old locus tag: NARPIN1_01910
so part of: sequence
location: complement(174401..177016)
location: region:174401-177016:-1
so has part: feature:174401-177016:-1:exon
subclass of: SO_0000010

position:174401:-1
position: 174401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177016:-1
position: 177016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174401-177016:-1:exon

NARPIN1_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00945
old locus tag: NARPIN1_01910
EC number: 6.1.1.9
inference: COORDINATES: protein motif:HMM:TIGR00422.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: valine--tRNA ligase
translation: MKKIYNPKFIENKISKLWNKNKNIIFNKNLNNNNYYSIILPPLNITGNLHIGHAFQHVIMDFLVKYNKMIKKNVLWQSGLDHAGIATQIIIEKKTNIYNNLNKNKNIKFLNKEAWILKEKVKKKIKFQTKKIGNFIDFSNSRFTLDKKFNYSVNYAFIKLYNNNLIYKDTKIVNWDTKIGSAISDLEISYKESLNKVWNIKFPLLNDVSFNNIKNNKFIIVSTTRPETILGDSAIAINPNDNRYTNLIGKKVLIPIINRIIPIIFDSSIDINKGTGCVKITPGHNINDYKIGIKNSLPIINIFNKNGKINEFLELIDINNKLKYNLEKVPTLLQNKTILESREIIVKELLKLNLIDSINNEKIIIPYSNKSNSIVENLITNQWFLKTKEISLDAINVIKNKDIEFIPKKYENTYFNWMKNIEDWCISRQIWWGHNIPAWYDNNNNIYVGFNEIYIRKKFNLSKSLILKKDNDVLDTWFSSSLFIFSSLGWPKSYKKIKKFYPTSIIISGFDIIFFWISRIIMMSIYFMKDNKNIKNIVPFNKIYITGLINDENGYKMSKSNGNIIDPIDIINGISLEKLIIKRTSNLLNKNKKELIIKSTTKEFPNGIKSYGADSLRYGLIKLSYSNNKNIKLNINLIDSYNKFCNKLWNVSLFVIKNTNYTNYNKIELSNIKLDINKWILVKLNILIKNINIEINNYRLDVYGELIYKFIKNEFCNWYIEFSKILIEKKQEIEEIKYFLKYILINIIKISHPIIPFITEEISQKLNINKLLIQQDFPKFNNNYINLKYTYKINIIKEIIKKIRNIKSKITNNNFKIIINNIKIELNENDIYIISKFVNIYELYINYYNYNYNNIIYKDNLINDIKIIFLT
SIO_010081: NARPIN1_RS00945
subclass of: SO_0000673
so part of: NARPIN1_RS00945
location: complement(174401..177016)
location: region:174401-177016:-1
so has part: feature:174401-177016:-1:exon

WP_130579326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174401-177016:-1:exon

NARPIN1_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00950
old locus tag: NARPIN1_01920
so part of: sequence
location: 177088..177171
location: region:177088-177171:1
so has part: feature:177088-177171:1:exon
subclass of: SO_0000663

position:177088:1
position: 177088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177171:1
position: 177171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177088-177171:1:exon

NARPIN1_RS00950
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS00950
old locus tag: NARPIN1_01920
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:177122..177124,aa:Leu,seq:caa)
SIO_010081: NARPIN1_RS00950
subclass of: SO_0000673
so part of: NARPIN1_RS00950
location: 177088..177171
location: region:177088-177171:1
so has part: feature:177088-177171:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177088-177171:1:exon

NARPIN1_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00955
old locus tag: NARPIN1_01930
so part of: sequence
location: 177179..177829
location: region:177179-177829:1
so has part: feature:177179-177829:1:exon
subclass of: SO_0000010

position:177179:1
position: 177179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177829:1
position: 177829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177179-177829:1:exon

NARPIN1_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00955
old locus tag: NARPIN1_01930
inference: COORDINATES: protein motif:HMM:NF014796.2
note: SodA; manganese binding; only present under aerobic conditions; destroys free radicals; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-Mn family superoxide dismutase
translation: MNNIKLPNLNFNFNYFEPYIDTDTMKLHYFSYHKSYVDNLNNILKEKHYLNNFNLINLIENLSKFPRSIRNILRYNIGGYINHNFFWESLGYNNNIHNSLINCINKSFGNINKLKNEFEYNAISSFGVGWLWLILNDNNISILFTKNNDNPIMGFNFCKTFGYPILVLDLWEHSYLNKYKNNILNYVKSFWKIINWNFISYRYLNIKFKLNKSNMI
SIO_010081: NARPIN1_RS00955
subclass of: SO_0000673
so part of: NARPIN1_RS00955
location: 177179..177829
location: region:177179-177829:1
so has part: feature:177179-177829:1:exon

WP_172597010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177179-177829:1:exon

NARPIN1_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: murA
locus tag: NARPIN1_RS00960
old locus tag: NARPIN1_01940
so part of: sequence
location: 177906..179171
location: region:177906-179171:1
so has part: feature:177906-179171:1:exon
subclass of: SO_0000010

position:177906:1
position: 177906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179171:1
position: 179171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177906-179171:1:exon

NARPIN1_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: murA
locus tag: NARPIN1_RS00960
old locus tag: NARPIN1_01940
EC number: 2.5.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014498755.1
GO function: GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
translation: MNKICIKGPSKLIGDIKISGSKNSVLPILILSLFLDGEVIIKNVPNIFDVNIVIKLLIYIGSKIEYSNSTYYINNKFINTSSIPYEFASKIRASIWIIAPLLYRFNCVNTFFPGGCSIGLRPIDLHIYALKKLGVLFELNNNIISAKINGSFFGSIINLNKISVGATITSISAAILAEGTTIIKNSSKEPEVIDVINFLNMLGANIIGAGTNEIKVIGKKKLNNIGKSYYIPFDRIETGTFLIAAAISRGNITCENVKFDRLKIVLNKLKNTGASINVGNDFINLNMNSKRPKSVSLYTFPYPGFPTDMQPQFSILNSIGTGSSYIIENIFENRFTHVNELISMGANIIIKNNKIIFYGVNNLFGSIIEAKDLRSSISLVLAGSIAIGETIINNINYINRGYENIFSKLKSIGLNFKLFFD
SIO_010081: NARPIN1_RS00960
subclass of: SO_0000673
so part of: NARPIN1_RS00960
location: 177906..179171
location: region:177906-179171:1
so has part: feature:177906-179171:1:exon

WP_130579330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177906-179171:1:exon

NARPIN1_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00965
old locus tag: NARPIN1_01950
so part of: sequence
location: complement(179180..180538)
location: region:179180-180538:-1
so has part: feature:179180-180538:-1:exon
subclass of: SO_0000010

position:179180:-1
position: 179180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180538:-1
position: 180538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179180-180538:-1:exon

NARPIN1_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00965
old locus tag: NARPIN1_01950
EC number: 3.4.21.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015344353.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Do family serine endopeptidase
translation: MKLNLLLKILLIISNIFSTSIIHSYNNHKDNKNITFSLAPMLEKVIPSVVNIYTEGVKEKQYNIPKEFKYFFGPNIPKDNKLFEGIGSGVIIDSNKGYIITNNHVVKNVNKIKIRLNDGREFNAKLIGNDNRNDIAIIKFVNVPKNLVEIKIANSDLIRVGDFVVAIGNPFGLGQTATSGIISALGRSGLNSNGLENFIQTDASINKGNSGGALVNINGELIGINTAIIAPNGGNIGIGFAIPSNIIKNLSYQIIKFGEVKRNQLGIKCIELNPDISKAFNLSISKGIFISEVMYGSPAYKYDIKPGDIILSINDKEINNFSELKLKIGISLPGENLKVGILRNNITKYIYVKLDNLSLSDNEEKILISSLKGATFKNIVKDNINYIQVSDIIKGSIAYLIGLRKNDIIIELNKNKVYDLNQFKKILINSKNKLMSLSVIRNNSNVFLIFRK
SIO_010081: NARPIN1_RS00965
subclass of: SO_0000673
so part of: NARPIN1_RS00965
location: complement(179180..180538)
location: region:179180-180538:-1
so has part: feature:179180-180538:-1:exon

WP_130579443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179180-180538:-1:exon

NARPIN1_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplM
locus tag: NARPIN1_RS00970
old locus tag: NARPIN1_01960
so part of: sequence
location: 180709..181128
location: region:180709-181128:1
so has part: feature:180709-181128:1:exon
subclass of: SO_0000010

position:180709:1
position: 180709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181128:1
position: 181128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180709-181128:1:exon

NARPIN1_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplM
locus tag: NARPIN1_RS00970
old locus tag: NARPIN1_01960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011930217.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L13
translation: MLLNKKVIRKWYLLDAENKNLGRISTLISLILQGKNKSEYSSNIDVGDYIVLINAKKIKVTGNKFNNKIYYKHTGYIGNLKKYCFKDIMQKNPKYIIIHSIKGMLPKNKLQNIFIKKLKIFLDSNHTYKNIKFNILDIN
SIO_010081: NARPIN1_RS00970
subclass of: SO_0000673
so part of: NARPIN1_RS00970
location: 180709..181128
location: region:180709-181128:1
so has part: feature:180709-181128:1:exon

WP_130579332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180709-181128:1:exon

NARPIN1_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsI
locus tag: NARPIN1_RS00975
old locus tag: NARPIN1_01970
so part of: sequence
location: 181138..181524
location: region:181138-181524:1
so has part: feature:181138-181524:1:exon
subclass of: SO_0000010

position:181138:1
position: 181138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181524:1
position: 181524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181138-181524:1:exon

NARPIN1_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsI
locus tag: NARPIN1_RS00975
old locus tag: NARPIN1_01970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013877973.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S9
translation: MLIYYGTGRRKNSSSRVFMKNGNGNIVINKINIDKYVYMNLKKYIIISPMIITNLIDKFDLFITVKGGGYSSQLYAIRLGISRAIVKYNENFKNILKKLKYLTRDSRSVERKKFGLKKSRKKPQYSKR
SIO_010081: NARPIN1_RS00975
subclass of: SO_0000673
so part of: NARPIN1_RS00975
location: 181138..181524
location: region:181138-181524:1
so has part: feature:181138-181524:1:exon

WP_130579334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181138-181524:1:exon

NARPIN1_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00980
old locus tag: NARPIN1_01980
so part of: sequence
location: complement(181525..182082)
location: region:181525-182082:-1
so has part: feature:181525-182082:-1:exon
subclass of: SO_0000010

position:181525:-1
position: 181525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182082:-1
position: 182082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181525-182082:-1:exon

NARPIN1_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00980
old locus tag: NARPIN1_01980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNIFNKNINKFTLILISAFLTKIISDPRNINIQIIDVINKFKIKNFIKKNINKNNIKIISYNNNIILIGKLDSLNEINKLNKIINNYKYNKIKIFNKIKINNNKIKKQYFLKYFYENIKLYLILLKFNTTKLSNIKFFIVNDEIYIIGICNRKDTINLIRLINYYFKNKEIITAIIHKDFLIKK
SIO_010081: NARPIN1_RS00980
subclass of: SO_0000673
so part of: NARPIN1_RS00980
location: complement(181525..182082)
location: region:181525-182082:-1
so has part: feature:181525-182082:-1:exon

WP_130579336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181525-182082:-1:exon

NARPIN1_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rnpB
locus tag: NARPIN1_RS00985
old locus tag: NARPIN1_01990
so part of: sequence
location: 182154..182491
location: region:182154-182491:1
so has part: feature:182154-182491:1:exon
subclass of: SO_0000011

position:182154:1
position: 182154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182491:1
position: 182491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182154-182491:1:exon

NARPIN1_RS00985
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1971488
nc RNA class: RNase_P_RNA
gene: rnpB
locus tag: NARPIN1_RS00985
old locus tag: NARPIN1_01990
product: RNase P RNA component class A
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00010
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: NARPIN1_RS00985
subclass of: SO_0000673
so part of: NARPIN1_RS00985
location: 182154..182491
location: region:182154-182491:1
so has part: feature:182154-182491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182154-182491:1:exon

NARPIN1_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS00990
old locus tag: NARPIN1_02000
so part of: sequence
location: 182515..182853
location: region:182515-182853:1
so has part: feature:182515-182853:1:exon
subclass of: SO_0000010

position:182515:1
position: 182515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182853:1
position: 182853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182515-182853:1:exon

NARPIN1_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS00990
old locus tag: NARPIN1_02000
inference: COORDINATES: protein motif:HMM:NF014725.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit YajC
translation: MHINFLNKIINFLNIIFICNYYDFIYILLLTLFLIVFTIIIPNKIKYINYKKFVNSIKIGDEILTSGGLICKVYKSLNNNYFLVIINNNQKVLISKDYIRSKLPNGTLDNLN
SIO_010081: NARPIN1_RS00990
subclass of: SO_0000673
so part of: NARPIN1_RS00990
location: 182515..182853
location: region:182515-182853:1
so has part: feature:182515-182853:1:exon

WP_130579339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182515-182853:1:exon

NARPIN1_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: prmB
locus tag: NARPIN1_RS00995
old locus tag: NARPIN1_02010
so part of: sequence
location: 182863..183762
location: region:182863-183762:1
so has part: feature:182863-183762:1:exon
subclass of: SO_0000010

position:182863:1
position: 182863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183762:1
position: 183762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182863-183762:1:exon

NARPIN1_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: prmB
locus tag: NARPIN1_RS00995
old locus tag: NARPIN1_02010
EC number: 2.1.1.298
inference: COORDINATES: protein motif:HMM:TIGR03533.1
GO function: GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0042273 - ribosomal large subunit biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L3 N(5)-glutamine methyltransferase
translation: MNKIYTVKNIIILISNKFKKSNIFYGHGSLNCFDEAKNFILSYIGINNNLYFKYKNTKISNILKSKIFKLLYKRIYNRIPVFYLTNRLYLYNLEFFINKNVVIPRSHILEIISNKFTNIINYYPNNILDLCTGSGCLAILAAKIFFKSNIYASDICNLALNVAKKNIIINNINNIVLFRSDIYKSIPNINFDIILTNPPYVNIKDKYFLPKEYIHEPSIGLFAKNNGLEFINEILINSINFLTNRGVLICEIGDNYNKLINLYPNIKFNWININSKNKNVFFLKRTELKKYKKYFVKKL
SIO_010081: NARPIN1_RS00995
subclass of: SO_0000673
so part of: NARPIN1_RS00995
location: 182863..183762
location: region:182863-183762:1
so has part: feature:182863-183762:1:exon

WP_172597011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182863-183762:1:exon

NARPIN1_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: aroC
locus tag: NARPIN1_RS01000
old locus tag: NARPIN1_02020
so part of: sequence
location: 183773..184834
location: region:183773-184834:1
so has part: feature:183773-184834:1:exon
subclass of: SO_0000010

position:183773:1
position: 183773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184834:1
position: 184834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183773-184834:1:exon

NARPIN1_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: aroC
locus tag: NARPIN1_RS01000
old locus tag: NARPIN1_02020
EC number: 4.2.3.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011283041.1
GO function: GO:0004107 - chorismate synthase activity [Evidence IEA]
GO process: GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chorismate synthase
translation: MSGNSIGKIFRVTTFGESHGIALGGIIDGVPPKIQINEDDIQYDLNRRKPGNSKFTSPRKENDKIKILSGVFEGLTTGTSIGILIENNDFRSKDYESIKNIYRPGHADYTYEKKYGIRDYRGGGRSSARETIIRVAAGSIAKKFLENFNIKIKGYLSQMGNIHCEFKNWKNVDENPFFCSDLDKISDLENLINDLKNSGNSIGAKLKIIAENVPVGLGEPVFDRLDADIAHALMSINAVKGIEIGDGFSVVEKFGSDNRDEIFSSGFSSNHSGGILGGISTGQNIIATIALKPTSSISVIGNTINKYGEETLVSVKGRHDPCVGIRAVPIAEAMMSIVIMDHLLRYRAQCNNI
SIO_010081: NARPIN1_RS01000
subclass of: SO_0000673
so part of: NARPIN1_RS01000
location: 183773..184834
location: region:183773-184834:1
so has part: feature:183773-184834:1:exon

WP_130579343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183773-184834:1:exon

NARPIN1_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: dnaX
locus tag: NARPIN1_RS01005
old locus tag: NARPIN1_02030
so part of: sequence
location: 184836..185954
location: region:184836-185954:1
so has part: feature:184836-185954:1:exon
subclass of: SO_0000010

position:184836:1
position: 184836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185954:1
position: 185954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184836-185954:1:exon

NARPIN1_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: dnaX
locus tag: NARPIN1_RS01005
old locus tag: NARPIN1_02030
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:TIGR02397.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit gamma/tau
translation: MSNFSLKWRPKKFSEIVGQNNVINSIINSFKYNRIHNSYLIYGPYGTGKTSIARLISKGLNCDEYIKSCLNINYNFPCNKCNNCLLMENNKFIDFIEIDASLKTKVEDIRDLLDNINYLPYYGLNKIYLIDEIHTISKLSFSTLLKSLEEPPINTIFILVTTEINKIPNTILSRCFKLNLNKLDNNLIINRLCYISNIEKISFEQNVLYYISDIANGSLRDSLNILEQLSIVSKNNIKLELISNLFNICNLDILINLIEYIIYNDLNKLLIELYNFSLINLDYNFIINKLLIIIHYIFMINFNKNYYLDSIFNNKKNTLIKLSNNISIEKIELFYSLLIELKEKLIYYYNYKIAFEAYIIKIFYNINNKLNK
SIO_010081: NARPIN1_RS01005
subclass of: SO_0000673
so part of: NARPIN1_RS01005
location: 184836..185954
location: region:184836-185954:1
so has part: feature:184836-185954:1:exon

WP_130579345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184836-185954:1:exon

NARPIN1_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01010
old locus tag: NARPIN1_02040
so part of: sequence
location: 185980..186648
location: region:185980-186648:1
so has part: feature:185980-186648:1:exon
subclass of: SO_0000010

position:185980:1
position: 185980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186648:1
position: 186648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185980-186648:1:exon

NARPIN1_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS01010
old locus tag: NARPIN1_02040
inference: COORDINATES: protein motif:HMM:TIGR01351.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside monophosphate kinase
translation: MNIILIGPPGSGKGTQSKFIINKYNLLYISVGDLLRNISLINKDDFSLKIKNYIDSGKLLNDDFILSIINNYITKNINNKFNGILLDGFPRNLNQAYLLDKLKIKFNIIIEFIIDYKLIINRLSNRLIHEPSGRIYNNTFNPPLIPGFDDITGEKLSNRIDDNIKTIKDRLNIYNDNILDLRKYFFDKINNDNDINYYLINSGIDNIILKNIIYKILFLYKK
SIO_010081: NARPIN1_RS01010
subclass of: SO_0000673
so part of: NARPIN1_RS01010
location: 185980..186648
location: region:185980-186648:1
so has part: feature:185980-186648:1:exon

WP_130579347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185980-186648:1:exon

NARPIN1_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01015
old locus tag: NARPIN1_02050
so part of: sequence
location: 186651..186721
location: region:186651-186721:1
so has part: feature:186651-186721:1:exon
subclass of: SO_0000663

position:186651:1
position: 186651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186721:1
position: 186721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186651-186721:1:exon

NARPIN1_RS01015
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS01015
old locus tag: NARPIN1_02050
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:186683..186685,aa:Gly,seq:gcc)
SIO_010081: NARPIN1_RS01015
subclass of: SO_0000673
so part of: NARPIN1_RS01015
location: 186651..186721
location: region:186651-186721:1
so has part: feature:186651-186721:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186651-186721:1:exon

NARPIN1_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01020
old locus tag: NARPIN1_02060
so part of: sequence
location: 186726..186796
location: region:186726-186796:1
so has part: feature:186726-186796:1:exon
subclass of: SO_0000663

position:186726:1
position: 186726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186796:1
position: 186796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186726-186796:1:exon

NARPIN1_RS01020
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS01020
old locus tag: NARPIN1_02060
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:186758..186760,aa:Cys,seq:gca)
SIO_010081: NARPIN1_RS01020
subclass of: SO_0000673
so part of: NARPIN1_RS01020
location: 186726..186796
location: region:186726-186796:1
so has part: feature:186726-186796:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186726-186796:1:exon

NARPIN1_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01025
old locus tag: NARPIN1_02070
so part of: sequence
location: 186803..186883
location: region:186803-186883:1
so has part: feature:186803-186883:1:exon
subclass of: SO_0000663

position:186803:1
position: 186803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186883:1
position: 186883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186803-186883:1:exon

NARPIN1_RS01025
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS01025
old locus tag: NARPIN1_02070
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:186836..186838,aa:Leu,seq:taa)
SIO_010081: NARPIN1_RS01025
subclass of: SO_0000673
so part of: NARPIN1_RS01025
location: 186803..186883
location: region:186803-186883:1
so has part: feature:186803-186883:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186803-186883:1:exon

NARPIN1_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: cysS
locus tag: NARPIN1_RS01030
old locus tag: NARPIN1_02080
so part of: sequence
location: complement(186872..188242)
location: region:186872-188242:-1
so has part: feature:186872-188242:-1:exon
subclass of: SO_0000010

position:186872:-1
position: 186872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188242:-1
position: 188242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186872-188242:-1:exon

NARPIN1_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: cysS
locus tag: NARPIN1_RS01030
old locus tag: NARPIN1_02080
EC number: 6.1.1.16
inference: COORDINATES: protein motif:HMM:TIGR00435.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine--tRNA ligase
translation: MILFNTYSKKKEKIISKNINIYVCGITVYSYCHIGHARTFIIFDILLKFLKNLGYEINYVRNITDIDNKIIEESNKNNIDYKNLTNNFIHNMNNDFKSLNLNKPTHEPKVTECISEIINLIEILIIKKHVYRSLNGDLLFSIKSFKDYGKLSNRFKDINFNNNISNEYSDFVVWKLNSKYPNWNSPWGKGRPGWHIECSAISNKFFKNKTINIHGGGYDLLFPHHENELAQSYSGFDDFNIKIWMHIGSVIFFNEKMSKSLNNSFLIRNILKYFNPEVLKFFLISKHYRNPINYNSDNLKKSYFLLKKLYTSINNFKIIKKENYNYKTEFTYRFNEAMNNDLNIPKAYSILFEISNEINKFKNLNNTITNNLIIEMINLGNILGILQYDSNTFLKTKNNINNILELEILTLINKRNIARKNKDWNTADNIRFILNKRGIILEDNINKTIWKKKYPG
SIO_010081: NARPIN1_RS01030
subclass of: SO_0000673
so part of: NARPIN1_RS01030
location: complement(186872..188242)
location: region:186872-188242:-1
so has part: feature:186872-188242:-1:exon

WP_232021809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186872-188242:-1:exon

NARPIN1_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: ybeY
locus tag: NARPIN1_RS01035
old locus tag: NARPIN1_02090
so part of: sequence
location: 188323..188766
location: region:188323-188766:1
so has part: feature:188323-188766:1:exon
subclass of: SO_0000010

position:188323:1
position: 188323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188766:1
position: 188766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188323-188766:1:exon

NARPIN1_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: ybeY
locus tag: NARPIN1_RS01035
old locus tag: NARPIN1_02090
inference: COORDINATES: protein motif:HMM:TIGR00043.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rRNA maturation RNase YbeY
translation: MILNVSYNNINRINLPNMYFFEKFIKYIINYNNFYILNIKIVSKSNIKKLNNIFNKKNKPTNSLTFLKNINIKNNSINVGDIALCKSLIEKESKKYNINLYFHWSHILVHSCLHLLGFTHKNYDDTIFMENKEIEILKKFNIPNPHI
SIO_010081: NARPIN1_RS01035
subclass of: SO_0000673
so part of: NARPIN1_RS01035
location: 188323..188766
location: region:188323-188766:1
so has part: feature:188323-188766:1:exon

WP_130579351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188323-188766:1:exon

NARPIN1_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01040
old locus tag: NARPIN1_02100
so part of: sequence
location: 188786..191236
location: region:188786-191236:1
so has part: feature:188786-191236:1:exon
subclass of: SO_0000010

position:188786:1
position: 188786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191236:1
position: 191236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188786-191236:1:exon

NARPIN1_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS01040
old locus tag: NARPIN1_02100
inference: COORDINATES: protein motif:HMM:NF012361.2
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I tRNA ligase family protein
translation: MNKYNPKKIESYVQKFWELNNTFSVKENYNKKKYYCLSMFPYPSGKIHVGHVRNYTIGDIISRFYRMNNRNVLYPIGWDAFGLPAENAAINNNTSPEEWTLNNINIMRKQLKSLGFSFDWKKEILTCSNKYYIWEQYFLKKLFKNKMLYKKKSSVNWCPYDNTVLSNEQVINNKCWRCDSKVHIKNINQWFIKITKYADKLFYDLDKLNYWPEKVKLMQKNWIGRIEWIETKFKILNNLNIKYINIYLNNKYELTNLDYIVISFQNKISKIILGNKFNFYKKFFNKNNLLKTDIYIEHKLINKKINLFISNNNFIINNFFYKNIDNFTKNNSYIKSFNDINEILNKNKNILLKNAFIISNNSKYNINFNKNNNKLFIKKIIYNLKDWCISRQRYWGTPIPMAKYVKNNFIIPIPDKYLPINVPLYNDFLNKSTKNNIIINNKLAIKDKDTVDTFVQSSWYYIRYISPNYCKMINKELANYWLPIDQYIGGIEHSNMHLLYFRFFNKLMKKFKYIKYSEPSIKLLCQGMILSETFFYLKENKKIWVNFKDVTKICNKENKYSYFFNKIEVNYAGLSKMSKSKNNSVNPDTIIKKYGADTLRMFIIFSAPVKCDFVWNQKNIIGIYRFLNKVWNLVIKFIYNTDYESIDDLYNIKKNKLIIFINKTIDNITNDIKYKQSFNISISSIMKLTNLIKKNINLNKNNNEFNIKILSVLLKLLYPFAPHISFFLWKKLGYKNTIDFETWPKKEDECFNNKIKFIIYINNKFIKSINIKKDLSKNEILKYIKTINLLFIKKYEFNNYSKIIFIKNKLINILIN
SIO_010081: NARPIN1_RS01040
subclass of: SO_0000673
so part of: NARPIN1_RS01040
location: 188786..191236
location: region:188786-191236:1
so has part: feature:188786-191236:1:exon

WP_130579353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188786-191236:1:exon

NARPIN1_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01045
old locus tag: NARPIN1_02110
so part of: sequence
location: 191250..192290
location: region:191250-192290:1
so has part: feature:191250-192290:1:exon
subclass of: SO_0000010

position:191250:1
position: 191250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192290:1
position: 192290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191250-192290:1:exon

NARPIN1_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS01045
old locus tag: NARPIN1_02110
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEIININNLLNLVNFNKQIFFIILNDFFLTNKIKNILINKIYKLENNNNIYIKNYYVNNNSDLFNILYINNNLNIFNKKIIIIINLENLFFFNEKIFNFLNIKNIDIIIIFILNNNYYNININIFLNNFKKTNIYFIKENHISYNTFIFLIKNIFIKKYKFNLISKKTYNLLYLMYENNFIDINKILNYLCINNKKILNNNDVNKLSKIYFINPNYNSWIFLSIFGYKELSNLNILIIKNSKNNDSFINILKSLKKNLLFIISNSFKKENKNYLFINNLDVKYKNIILKNINKLNKNVLYKIIKLMFEIDLFVKNSNYKDEEIIWNKLDLISLLLNNLIYYEKNIK
SIO_010081: NARPIN1_RS01045
subclass of: SO_0000673
so part of: NARPIN1_RS01045
location: 191250..192290
location: region:191250-192290:1
so has part: feature:191250-192290:1:exon

WP_130579355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191250-192290:1:exon

NARPIN1_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rsfS
locus tag: NARPIN1_RS01050
old locus tag: NARPIN1_02120
so part of: sequence
location: 192271..192624
location: region:192271-192624:1
so has part: feature:192271-192624:1:exon
subclass of: SO_0000010

position:192271:1
position: 192271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192624:1
position: 192624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192271-192624:1:exon

NARPIN1_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rsfS
locus tag: NARPIN1_RS01050
old locus tag: NARPIN1_02120
inference: COORDINATES: protein motif:HMM:TIGR00090.1
GO function: GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0017148 - negative regulation of translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome silencing factor
translation: MKKILNDKPNIRKIYNKILDLKVKDISIFKSCKNNSLLDYILICTANSKEHIKYIKYNFFNKSYIKNINFFINEDNLYEWIIIDLININIHIMQKHIRNYYLIDNLYRENYEIKYNI
SIO_010081: NARPIN1_RS01050
subclass of: SO_0000673
so part of: NARPIN1_RS01050
location: 192271..192624
location: region:192271-192624:1
so has part: feature:192271-192624:1:exon

WP_130579357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192271-192624:1:exon

NARPIN1_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: mrdA
locus tag: NARPIN1_RS01055
old locus tag: NARPIN1_02130
so part of: sequence
location: 192602..194434
location: region:192602-194434:1
so has part: feature:192602-194434:1:exon
subclass of: SO_0000010

position:192602:1
position: 192602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194434:1
position: 194434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192602-194434:1:exon

NARPIN1_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: mrdA
locus tag: NARPIN1_RS01055
old locus tag: NARPIN1_02130
EC number: 3.4.16.4
inference: COORDINATES: protein motif:HMM:TIGR03423.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding protein 2
translation: MKLNIIYNRILLFLIYVFIFNIILISNIYIIQIINFKNYNTKSYKNCTKLIPIYPIRGCIFDCNGIPIAINNIKYKIEIISGNIKDIDNLLFNLSKFIYLNKYEILDIKKNIKKNPPYIPITIKDNLDINNISKVLVNKFKFKNLIIRKYYIRYYPYRDLLSHLIGYVSKISKNDLDNIKNNSKFYNNYTIYDNIGKIGIEKYYEKLLRGKLGFLEVKVNNKGKIIKIKNKINSEHGKDIYLSIDIKLSKLIKKLLSNSKSSVIVTDPRNGNILSLISNPSFNLNKLVSKISIKNYKKIFSNKNFPMFNRATQGFYPPASTIKPYIALYALNSKLINENSLIFDPGWWKLPKSNKLYMDWKKEGRGWINIIKAIEESSDIFFYEIAYRIGINELSKCMFNFEYGKNVEIDILEKSKGLVPTKNWKLNKLKLPWYDGDTISVGIGQGYLSVTPLQMVNSLNILINNGIKKKLSIIESFYDYKKEFKIYLNKENNSNKSEYFNNISINTWNIVKKGMYGVVNNSNGTAFNYFKNLKYKIAAKTGTAQVFSFKNNYIKNNISTNLRNHKLMIAYAPFDNPKISIAIVLENEGFGGNNNIGYIVKKIFDYYLLN
SIO_010081: NARPIN1_RS01055
subclass of: SO_0000673
so part of: NARPIN1_RS01055
location: 192602..194434
location: region:192602-194434:1
so has part: feature:192602-194434:1:exon

WP_130579359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192602-194434:1:exon

NARPIN1_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rodA
locus tag: NARPIN1_RS01060
old locus tag: NARPIN1_02140
so part of: sequence
location: 194438..195508
location: region:194438-195508:1
so has part: feature:194438-195508:1:exon
subclass of: SO_0000010

position:194438:1
position: 194438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195508:1
position: 195508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194438-195508:1:exon

NARPIN1_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rodA
locus tag: NARPIN1_RS01060
old locus tag: NARPIN1_02140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011069977.1
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein RodA
translation: MKIINNKYYCDFVLILYILILLIIKLLLISNNSSKYLYKSIISIFISLSVMFIFSKINYRFYEKVSYIFYIISLILIILNIFIGKNCKGSYRWINLYFFNFQVSEIFKISIPMLISSISYRNKDINSIKLILLSIFIIFLPSLIILFQPNLGTSILIILSGFFTLFFSGINFINILFINFILFIFILIYYNFFIKDYQKNRILTLLNNKNKLNYHINQSKIAIGSGGIFGKGLFNGTQSRLNFLPESHTDFIFSVLAEEFGLFGVIILLSIYLLIIIKCLKLALNSNNIFNKVLISSFISSIFFSIFINIGMVIGILPIVGIPLPIISYGGSSLFITLIKIGIILSIKNNNENLYF
SIO_010081: NARPIN1_RS01060
subclass of: SO_0000673
so part of: NARPIN1_RS01060
location: 194438..195508
location: region:194438-195508:1
so has part: feature:194438-195508:1:exon

WP_130579361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194438-195508:1:exon

NARPIN1_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01065
old locus tag: NARPIN1_02150
so part of: sequence
location: 195549..196277
location: region:195549-196277:1
so has part: feature:195549-196277:1:exon
subclass of: SO_0000010

position:195549:1
position: 195549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196277:1
position: 196277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195549-196277:1:exon

NARPIN1_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS01065
old locus tag: NARPIN1_02150
inference: COORDINATES: protein motif:HMM:NF013214.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bax inhibitor-1/YccA family protein
translation: MNEFYNFEDNELSGKISTFKIFITKVYAWMSIGLLITSFVSFYFTKISFLFNLLYNSKLLLLITFFQIILVYLLSNIITILSYKLSIFLFVLYSILNGITMSGIFLIYTFESIFNIFLLTSFIFMFMSIYGFLTKKDLTNLGNLLLMLLLGILLFSIFNIIFKSILLLYLLSYINIIIFTGLIAFDTQKLKDLSNKLYYTNNNKLLYKYSILGALILYLDFINLFLIPIKIFGKKKDEDNYY
SIO_010081: NARPIN1_RS01065
subclass of: SO_0000673
so part of: NARPIN1_RS01065
location: 195549..196277
location: region:195549-196277:1
so has part: feature:195549-196277:1:exon

WP_130579363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195549-196277:1:exon

NARPIN1_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplI
locus tag: NARPIN1_RS01070
old locus tag: NARPIN1_02160
so part of: sequence
location: complement(196291..196740)
location: region:196291-196740:-1
so has part: feature:196291-196740:-1:exon
subclass of: SO_0000010

position:196291:-1
position: 196291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196740:-1
position: 196740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196291-196740:-1:exon

NARPIN1_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplI
locus tag: NARPIN1_RS01070
old locus tag: NARPIN1_02160
inference: COORDINATES: protein motif:HMM:TIGR00158.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L9
translation: MKIILLDKIENLGNKNDLVEVKSGYVRNFLICKKSKYYVNYNLIKNKKIKLDNNYNNNIYKYDFKKMYEDILKIKNIIFYKKSNKNGKLFDSVNKKNIINYIISNISYCKSKFIKVFLNKNIKNIGNFYIKISINNTYFINMNIIIKNK
SIO_010081: NARPIN1_RS01070
subclass of: SO_0000673
so part of: NARPIN1_RS01070
location: complement(196291..196740)
location: region:196291-196740:-1
so has part: feature:196291-196740:-1:exon

WP_130579365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196291-196740:-1:exon

NARPIN1_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsR
locus tag: NARPIN1_RS01075
old locus tag: NARPIN1_02170
so part of: sequence
location: complement(196747..196986)
location: region:196747-196986:-1
so has part: feature:196747-196986:-1:exon
subclass of: SO_0000010

position:196747:-1
position: 196747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196986:-1
position: 196986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196747-196986:-1:exon

NARPIN1_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsR
locus tag: NARPIN1_RS01075
old locus tag: NARPIN1_02170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015482563.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S18
translation: MFNINKKKKFCKFTINKISYIDYKDIDMLKKYITESGKIIPSKITGTKLKFQRKLSSAIKIARYLSLIFYTDRQFKNKI
SIO_010081: NARPIN1_RS01075
subclass of: SO_0000673
so part of: NARPIN1_RS01075
location: complement(196747..196986)
location: region:196747-196986:-1
so has part: feature:196747-196986:-1:exon

WP_130579367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196747-196986:-1:exon

NARPIN1_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsF
locus tag: NARPIN1_RS01080
old locus tag: NARPIN1_02180
so part of: sequence
location: complement(196994..197332)
location: region:196994-197332:-1
so has part: feature:196994-197332:-1:exon
subclass of: SO_0000010

position:196994:-1
position: 196994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197332:-1
position: 197332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196994-197332:-1:exon

NARPIN1_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsF
locus tag: NARPIN1_RS01080
old locus tag: NARPIN1_02180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013516419.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S6
translation: MKNYEIVLLLNTTSEVQYKKIIEKYLLIIKNHGGIIHRLENWGRRELAYSIKKINKAYYSLINIECKIDLINELKNNFKLNSYIIRNIILNIKKAIKEPSIIMNNKQNINKV
SIO_010081: NARPIN1_RS01080
subclass of: SO_0000673
so part of: NARPIN1_RS01080
location: complement(196994..197332)
location: region:196994-197332:-1
so has part: feature:196994-197332:-1:exon

WP_130579369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196994-197332:-1:exon

NARPIN1_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rlmB
locus tag: NARPIN1_RS01085
old locus tag: NARPIN1_02190
so part of: sequence
location: complement(197361..198098)
location: region:197361-198098:-1
so has part: feature:197361-198098:-1:exon
subclass of: SO_0000010

position:197361:-1
position: 197361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198098:-1
position: 198098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197361-198098:-1:exon

NARPIN1_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rlmB
locus tag: NARPIN1_RS01085
old locus tag: NARPIN1_02190
inference: COORDINATES: protein motif:HMM:TIGR00186.1
GO function: GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO process: GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
translation: MSEIVYGLNTIRSILDNNPKIIKESYIILNLKLNIRIIEIIRLLKKNKININYINKNNINKFTNIKEIKNIFIIIYNNKNIIKKIVKMEDLLNKNIILILENIQDPRNLGSCLRSADVANIDCVIITKYKSSPITEVVRKVASGAVDNLNIFIVKNIINILIFLKKNNINILGTSDKSNKIIFNYKFELPIAIIFGSECKGIRNITSRYCNDIIKIPILGKTNSLNVSVSVGIFLFEIIRQNYFK
SIO_010081: NARPIN1_RS01085
subclass of: SO_0000673
so part of: NARPIN1_RS01085
location: complement(197361..198098)
location: region:197361-198098:-1
so has part: feature:197361-198098:-1:exon

WP_130579371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197361-198098:-1:exon

NARPIN1_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: miaA
locus tag: NARPIN1_RS01090
old locus tag: NARPIN1_02200
so part of: sequence
location: complement(198100..199059)
location: region:198100-199059:-1
so has part: feature:198100-199059:-1:exon
subclass of: SO_0000010

position:198100:-1
position: 198100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199059:-1
position: 199059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198100-199059:-1:exon

NARPIN1_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: miaA
locus tag: NARPIN1_RS01090
old locus tag: NARPIN1_02200
EC number: 2.5.1.75
inference: COORDINATES: protein motif:HMM:TIGR00174.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
translation: MNKFIINKKFNKIPILFIIGHTASGKTKLSFKLSNLFPIKLINSDSTLIFRDMNIGTSKPNKEELIKYPYKIIDIRDPIQKYSVLDFCRDSITSIYEILLCNKIPTFVGGSMFYIKTLLNGINLYSNLFINFNIKKSINDINIYKIKNLYFKLNKNNLNINNNKIIYKYIENYFLIKNNSKFIGLNNISNKLFDIYQIIIINEDKTNINKKIKFRFYKMIDDGFENEVLNLFNRGDLDYNKQSIKSIGYKQMWDYFSNKISYKDMINNSIKSTINLYKKQINWINNWKFKFKKFNTDNNSINKLIHHIKNIIKNYNYNI
SIO_010081: NARPIN1_RS01090
subclass of: SO_0000673
so part of: NARPIN1_RS01090
location: complement(198100..199059)
location: region:198100-199059:-1
so has part: feature:198100-199059:-1:exon

WP_130579373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198100-199059:-1:exon

NARPIN1_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: orn
locus tag: NARPIN1_RS01095
old locus tag: NARPIN1_02210
so part of: sequence
location: complement(199064..199609)
location: region:199064-199609:-1
so has part: feature:199064-199609:-1:exon
subclass of: SO_0000010

position:199064:-1
position: 199064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199609:-1
position: 199609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199064-199609:-1:exon

NARPIN1_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: orn
locus tag: NARPIN1_RS01095
old locus tag: NARPIN1_02210
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004392464.1
GO function: GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oligoribonuclease
translation: MLKNDKNLIWIDLEMTGLDPIKCHIIEIATLITDSELNILAKGPEFIIYQSDKNLSNMDKWNINTHTNNGLIYKIKNSKINENEAENITLDFLNNWVNYKKSPMCGNNVSQDRRFLVKYMPKLENYFNYKHLDVNSIKELVKRWKPEILCNFKKRNIHRAFSDIYESVEELIFYRKNFIYS
SIO_010081: NARPIN1_RS01095
subclass of: SO_0000673
so part of: NARPIN1_RS01095
location: complement(199064..199609)
location: region:199064-199609:-1
so has part: feature:199064-199609:-1:exon

WP_130579375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199064-199609:-1:exon

NARPIN1_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: ppa
locus tag: NARPIN1_RS01100
old locus tag: NARPIN1_02220
so part of: sequence
location: complement(199618..200160)
location: region:199618-200160:-1
so has part: feature:199618-200160:-1:exon
subclass of: SO_0000010

position:199618:-1
position: 199618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200160:-1
position: 200160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199618-200160:-1:exon

NARPIN1_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: ppa
locus tag: NARPIN1_RS01100
old locus tag: NARPIN1_02220
EC number: 3.6.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053617.1
GO function: GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO process: GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic diphosphatase
translation: MNINNIKPGNNIPDDINVIIEIPNKLNIKYEIDSYGNILIDRFINKMSYPCNYGFINKTLSNDNDNLDVVIPINLSLQIGSIINCRPIGILNMCDESGEDNKIIAVPNFNISNEFDNIKDIYDISETILHNIRYFFENYKNNYKNKWSKVKDFKDKKYAKEEIINSINKFIKKNNIKNIF
SIO_010081: NARPIN1_RS01100
subclass of: SO_0000673
so part of: NARPIN1_RS01100
location: complement(199618..200160)
location: region:199618-200160:-1
so has part: feature:199618-200160:-1:exon

WP_130579377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199618-200160:-1:exon

NARPIN1_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: trpS
locus tag: NARPIN1_RS01105
old locus tag: NARPIN1_02230
so part of: sequence
location: 200258..201253
location: region:200258-201253:1
so has part: feature:200258-201253:1:exon
subclass of: SO_0000010

position:200258:1
position: 200258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201253:1
position: 201253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200258-201253:1:exon

NARPIN1_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: trpS
locus tag: NARPIN1_RS01105
old locus tag: NARPIN1_02230
EC number: 6.1.1.2
inference: COORDINATES: protein motif:HMM:TIGR00233.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO process: GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan--tRNA ligase
translation: MNKIKIFSGIQPSGNLTIGNYISILKQINKIQYDNICMLCIADLHIMNKYINPISVRKNILDLISILISSGIEYKNNIIFLQSDILENTQLYWILSNFIRFNELKRLNQFKEKINILNNSINLNLLNYPILMASDILLYRIDNIIVGKDQKQHIEIMNLIAKRFNSFYGYYFKIPNIIINENHYIMSLSNPNKKMSKSDNNDNNSIKILDDEYTIRKKIKKAVTDSNNSINYNKINQPGVYNLLNILSSISNVSINDLLIYFKNKSYNDLKNKLSDEIVNELKKIKDKYIYIRSNEYLLNKIIENGFNKAKKIAKNTLFDIKKLIGLNKLN
SIO_010081: NARPIN1_RS01105
subclass of: SO_0000673
so part of: NARPIN1_RS01105
location: 200258..201253
location: region:200258-201253:1
so has part: feature:200258-201253:1:exon

WP_130579379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200258-201253:1:exon

NARPIN1_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpmB
locus tag: NARPIN1_RS01110
old locus tag: NARPIN1_02240
so part of: sequence
location: 201258..201482
location: region:201258-201482:1
so has part: feature:201258-201482:1:exon
subclass of: SO_0000010

position:201258:1
position: 201258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201482:1
position: 201482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201258-201482:1:exon

NARPIN1_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpmB
locus tag: NARPIN1_RS01110
old locus tag: NARPIN1_02240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070207.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L28
translation: MLKCIITNKKVLFGNNRSNAMNATRRKFFPNIHMKKFWIPSKNKYIKLKISTKGIRLIDKFGIENLLKKFKIKY
SIO_010081: NARPIN1_RS01110
subclass of: SO_0000673
so part of: NARPIN1_RS01110
location: 201258..201482
location: region:201258-201482:1
so has part: feature:201258-201482:1:exon

WP_130579382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201258-201482:1:exon

NARPIN1_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpmG
locus tag: NARPIN1_RS01115
old locus tag: NARPIN1_02250
so part of: sequence
location: 201488..201664
location: region:201488-201664:1
so has part: feature:201488-201664:1:exon
subclass of: SO_0000010

position:201488:1
position: 201488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201664:1
position: 201664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201488-201664:1:exon

NARPIN1_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpmG
locus tag: NARPIN1_RS01115
old locus tag: NARPIN1_02250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011927814.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L33
translation: MSKKKLTEIIKLISSETKHFYTTTKSKKIKLKKIKIKKFDPIIKKHVIYNEYKINKNK
SIO_010081: NARPIN1_RS01115
subclass of: SO_0000673
so part of: NARPIN1_RS01115
location: 201488..201664
location: region:201488-201664:1
so has part: feature:201488-201664:1:exon

WP_130579384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201488-201664:1:exon

NARPIN1_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: tpiA
locus tag: NARPIN1_RS01120
old locus tag: NARPIN1_02260
so part of: sequence
location: complement(201667..202425)
location: region:201667-202425:-1
so has part: feature:201667-202425:-1:exon
subclass of: SO_0000010

position:201667:-1
position: 201667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202425:-1
position: 202425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201667-202425:-1:exon

NARPIN1_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: tpiA
locus tag: NARPIN1_RS01120
old locus tag: NARPIN1_02260
EC number: 5.3.1.1
inference: COORDINATES: protein motif:HMM:NF012349.2
GO function: GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: triose-phosphate isomerase
translation: MLLVANWKLNGNKLLLNNFINKLYENKKIINNKIILAPPIIYLDYLNNILLKKYNINNVYSSSQNVDLNFEGPYTGEISIYMLKEIGVSYVILGHSERRIIHKESNKNIIKKFILVKSNNLIPILCIGENNNDYINKKSLLKCINQIKEFIKYGGIKIFYNSIIAYEPIWSIGTNVNASIDHIEYIICSILKYLNKIDKNISNNIKFLYGGSVSIDNIDIFLNKYFINGLLIGKSSLDINNFLYMINKINKI
SIO_010081: NARPIN1_RS01120
subclass of: SO_0000673
so part of: NARPIN1_RS01120
location: complement(201667..202425)
location: region:201667-202425:-1
so has part: feature:201667-202425:-1:exon

WP_130579386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201667-202425:-1:exon

NARPIN1_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: hslU
locus tag: NARPIN1_RS01125
old locus tag: NARPIN1_02270
so part of: sequence
location: complement(202464..203786)
location: region:202464-203786:-1
so has part: feature:202464-203786:-1:exon
subclass of: SO_0000010

position:202464:-1
position: 202464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203786:-1
position: 203786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202464-203786:-1:exon

NARPIN1_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: hslU
locus tag: NARPIN1_RS01125
old locus tag: NARPIN1_02270
EC number: 3.4.25.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499706.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent protease ATPase subunit HslU
translation: MYKTVTPKDIVNYLDKYIIGQDKAKKTIAIALRNRYRRMNINKSLRNDIAPKNILMIGPTGVGKTEISRRLLKLLNFPFIKVEATKFTEVGYIGKEVDSIIKDLLENTIKNLKFKHIKKNKIKIKKIVEDKILKILINNKNSINNDIEDIEINNLKNKLSNKELEDIEIEINLLSSSVGVEVISTEVDDINNQIQSILKNISKNKDKIFKVKVKEARKILMEEEFNKNLNLDNIKKESINLIEQNGIVFIDEIDKICRKKNDIYNGIDVSREGVQRDLLSLIDGCTINTKHGIIKTDNILFIASGSFYNVDVSDLLPELQGRLPIKVKLDSLSLLDFEKILTKTKNSIINQYKLLIKTEKIDINFTDCSIKKIAEFSYKMNELHDNLGARRLYSILEELLEDILFNAPNISNKKIIIDENYVNLKLSKNFNNIDLYKYII
SIO_010081: NARPIN1_RS01125
subclass of: SO_0000673
so part of: NARPIN1_RS01125
location: complement(202464..203786)
location: region:202464-203786:-1
so has part: feature:202464-203786:-1:exon

WP_130579388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202464-203786:-1:exon

NARPIN1_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: hslV
locus tag: NARPIN1_RS01130
old locus tag: NARPIN1_02280
so part of: sequence
location: complement(203795..204319)
location: region:203795-204319:-1
so has part: feature:203795-204319:-1:exon
subclass of: SO_0000010

position:203795:-1
position: 203795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204319:-1
position: 204319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203795-204319:-1:exon

NARPIN1_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: hslV
locus tag: NARPIN1_RS01130
old locus tag: NARPIN1_02280
EC number: 3.4.25.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005279166.1
GO function: GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO process: GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent protease subunit HslV
translation: MTTILSVRKKNNVVIGGDGQATFGDYIIKPNVKKVRKIYNNSIIVGFSGSTSDSITLLELFEQKLNENNGNLLKSSVDLSKNWRNDKFLKTLETLLVVVDIDKSFLISGNGDVMQLNNDLIAIGSGGMYAKSAACALLENTELSAKDIVNKSLCIASDICIYTNKNFIIEELKY
SIO_010081: NARPIN1_RS01130
subclass of: SO_0000673
so part of: NARPIN1_RS01130
location: complement(203795..204319)
location: region:203795-204319:-1
so has part: feature:203795-204319:-1:exon

WP_130579390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203795-204319:-1:exon

NARPIN1_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpmE
locus tag: NARPIN1_RS01135
old locus tag: NARPIN1_02290
so part of: sequence
location: 204474..204683
location: region:204474-204683:1
so has part: feature:204474-204683:1:exon
subclass of: SO_0000010

position:204474:1
position: 204474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204683:1
position: 204683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204474-204683:1:exon

NARPIN1_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpmE
locus tag: NARPIN1_RS01135
old locus tag: NARPIN1_02290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012619590.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L31
translation: MKKNIHPNIFNIDVICSCNNIIKIKSTSNSNINIDTCNLCHPFYTNKNRIIYNIGKIGKFNNKFKDFFE
SIO_010081: NARPIN1_RS01135
subclass of: SO_0000673
so part of: NARPIN1_RS01135
location: 204474..204683
location: region:204474-204683:1
so has part: feature:204474-204683:1:exon

WP_130579392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204474-204683:1:exon

NARPIN1_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rplU
locus tag: NARPIN1_RS01140
old locus tag: NARPIN1_02300
so part of: sequence
location: 204738..205052
location: region:204738-205052:1
so has part: feature:204738-205052:1:exon
subclass of: SO_0000010

position:204738:1
position: 204738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205052:1
position: 205052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204738-205052:1:exon

NARPIN1_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rplU
locus tag: NARPIN1_RS01140
old locus tag: NARPIN1_02300
inference: COORDINATES: protein motif:HMM:NF013025.2
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L21
translation: MMYVVFCNKGKQYIAENNSILFIDKLNNNENDYIEFNNIILVYKDNDIIIDKEYLSKIKIIALVLKHIKGKKIGIVKFKRRKNYLKRYNHRKLITKIKICNIIL
SIO_010081: NARPIN1_RS01140
subclass of: SO_0000673
so part of: NARPIN1_RS01140
location: 204738..205052
location: region:204738-205052:1
so has part: feature:204738-205052:1:exon

WP_130579394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204738-205052:1:exon

NARPIN1_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpmA
locus tag: NARPIN1_RS01145
old locus tag: NARPIN1_02310
so part of: sequence
location: 205058..205321
location: region:205058-205321:1
so has part: feature:205058-205321:1:exon
subclass of: SO_0000010

position:205058:1
position: 205058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205321:1
position: 205321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205058-205321:1:exon

NARPIN1_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpmA
locus tag: NARPIN1_RS01145
old locus tag: NARPIN1_02310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013516428.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L27
translation: MAHKKAAGSTKNGRDSIGKRLGIKCYDGENVLPGYIILRQRGMKIRPGCNVKCGRDYTIYSLIKGKVKFIKKNNINKIFVNVIKNNI
SIO_010081: NARPIN1_RS01145
subclass of: SO_0000673
so part of: NARPIN1_RS01145
location: 205058..205321
location: region:205058-205321:1
so has part: feature:205058-205321:1:exon

WP_130579396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205058-205321:1:exon

NARPIN1_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01150
old locus tag: NARPIN1_02320
so part of: sequence
location: 205318..206367
location: region:205318-206367:1
so has part: feature:205318-206367:1:exon
subclass of: SO_0000010

position:205318:1
position: 205318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206367:1
position: 206367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205318-206367:1:exon

NARPIN1_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS01150
old locus tag: NARPIN1_02320
inference: COORDINATES: protein motif:HMM:NF013205.2
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase
translation: MKNFYETIITVYAGNGGNGNCSFSKSSKKLFSGKPDGGNGGNGGNIFIFSNKSINNLLKINNKKIFKAENGRNGLNNKCNGRNGKNLIINVPINTKIYNLDTSELIDNLDIDNKIILVAKGGNKGLGNFIFKSSINRSPKNFTNGKKGEIRKLKLIFNLRPNVCILGMVNSGKSSLINLISNSNSKIDNYPFTTKYPILGTLFSENYKKISILDTPAIFNNIYKNKYLNLNIFKYFEKCNLILYIIDSSIINQKFIYDNINIINYIINDKLICKNIWIVFNKLDLVNNIFNFNKIIKFNFNNKYKYYIISCLNKFNINNLLLDINNFIDKNMYLNIHKYENKDLNINWN
SIO_010081: NARPIN1_RS01150
subclass of: SO_0000673
so part of: NARPIN1_RS01150
location: 205318..206367
location: region:205318-206367:1
so has part: feature:205318-206367:1:exon

WP_130579398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205318-206367:1:exon

NARPIN1_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: greA
locus tag: NARPIN1_RS01155
old locus tag: NARPIN1_02330
so part of: sequence
location: 206416..206877
location: region:206416-206877:1
so has part: feature:206416-206877:1:exon
subclass of: SO_0000010

position:206416:1
position: 206416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206877:1
position: 206877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206416-206877:1:exon

NARPIN1_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: greA
locus tag: NARPIN1_RS01155
old locus tag: NARPIN1_02330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008842746.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO process: GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription elongation factor GreA
translation: MTLNGANKLRKELNFLKKISRPKIIQSIIEARKHGDLKENYEYHAAKEQQKLCENRIKNIEIKLLNSKIIDIKNIKNNNLIIFGSTVELENLNSNNKEEYCIVGEEEFDIKNNRISIYSPIAKGLIGKKIGDIVYIQVPMGVLKYKIVNIKYI
SIO_010081: NARPIN1_RS01155
subclass of: SO_0000673
so part of: NARPIN1_RS01155
location: 206416..206877
location: region:206416-206877:1
so has part: feature:206416-206877:1:exon

WP_130579400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206416-206877:1:exon

NARPIN1_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01160
old locus tag: NARPIN1_02340
so part of: sequence
location: 206901..207506
location: region:206901-207506:1
so has part: feature:206901-207506:1:exon
subclass of: SO_0000010

position:206901:1
position: 206901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207506:1
position: 207506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206901-207506:1:exon

NARPIN1_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS01160
old locus tag: NARPIN1_02340
inference: COORDINATES: protein motif:HMM:NF013856.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RlmE family RNA methyltransferase
translation: MKNKYWIKNRLNDFYVKKSIINNYRSRSRFKIQEINNKFNIFKKNINIVDIGSSPGGWSEYASEIINNTGKIFSCDILPMKNINNVLFYKGDILDNNFLNKFIKEINGYDIKVVMSDVSPNISGFSCIDLPKIITLANLSLKIYLNLVKSNGYFILKLFYGNDINIFLKKIKLIFKNVNIFKPFSSSKNSSEFYIIANNLI
SIO_010081: NARPIN1_RS01160
subclass of: SO_0000673
so part of: NARPIN1_RS01160
location: 206901..207506
location: region:206901-207506:1
so has part: feature:206901-207506:1:exon

WP_172597012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206901-207506:1:exon

NARPIN1_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: ftsH
locus tag: NARPIN1_RS01165
old locus tag: NARPIN1_02350
so part of: sequence
location: 207548..209338
location: region:207548-209338:1
so has part: feature:207548-209338:1:exon
subclass of: SO_0000010

position:207548:1
position: 207548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209338:1
position: 209338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207548-209338:1:exon

NARPIN1_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: ftsH
locus tag: NARPIN1_RS01165
old locus tag: NARPIN1_02350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091465.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent zinc metalloprotease FtsH
translation: MDILKNFFIWLFVSIVLIFILQNINFNNNYSKDKIEYSRFIYDLNNNRIKEVYINGREILVTKKNNNNYITYIPFYDSELLKNLLKKNIKIIGEPIEKNNLLTSIFISWSPILILIIIWIFFIKQIQLNNKNAINFSKNRAKIIFNKVDINFSDVAGCDEVKNEISDIIFFLKNPEKFKNIGCRIPKGILMVGLPGTGKTLLAKALAGESNVPFFNISGSDFVEMFVGVGASRVRNMFYEAKKNSPCIIFIDEIDAVGRQRGFGLGSGNDEREQTLNQILVEMDGFNTKDNIVVIAATNRLDILDPALLRSGRFDRQILIDLPDIKGREEILRIHTKKIFMDLNINLSLISKYTSGFSGADLFNLVNESVILAIKNNKNHVSMDDFEKSIDKILLGLEKSSMVITNDQKELTAYHESGHTIVGKLISNNDLLHKVTIIPRSKSLGATCFLQEENLLNFNKIKLENQISILYGGRIAEEIIYGKNFVSTGSKDDIKKATIIARNMIMKWGYSYKLGPLYYDNIDLSNKKLFNNNKNISEYTHKIIDEEILNLIKINYNKAKNILINNINILHNMKDALIEYETLDSIQINKIINKKL
SIO_010081: NARPIN1_RS01165
subclass of: SO_0000673
so part of: NARPIN1_RS01165
location: 207548..209338
location: region:207548-209338:1
so has part: feature:207548-209338:1:exon

WP_232021810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207548-209338:1:exon

NARPIN1_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01170
old locus tag: NARPIN1_02360
so part of: sequence
location: 209344..209559
location: region:209344-209559:1
so has part: feature:209344-209559:1:exon
subclass of: SO_0000010

position:209344:1
position: 209344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209559:1
position: 209559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209344-209559:1:exon

NARPIN1_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS01170
old locus tag: NARPIN1_02360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRIIFTLLFVITSIFLIFFITYFNINNERLEFNYLDDLNMVNRKSFDYLNNIISFFSLLFFIFSLILKFYY
SIO_010081: NARPIN1_RS01170
subclass of: SO_0000673
so part of: NARPIN1_RS01170
location: 209344..209559
location: region:209344-209559:1
so has part: feature:209344-209559:1:exon

WP_130579404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209344-209559:1:exon

NARPIN1_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01175
old locus tag: NARPIN1_02370
so part of: sequence
location: 209568..209647
location: region:209568-209647:1
so has part: feature:209568-209647:1:exon
subclass of: SO_0000663

position:209568:1
position: 209568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209647:1
position: 209647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209568-209647:1:exon

NARPIN1_RS01175
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS01175
old locus tag: NARPIN1_02370
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:209602..209604,aa:Leu,seq:gag)
SIO_010081: NARPIN1_RS01175
subclass of: SO_0000673
so part of: NARPIN1_RS01175
location: 209568..209647
location: region:209568-209647:1
so has part: feature:209568-209647:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209568-209647:1:exon

NARPIN1_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01180
old locus tag: NARPIN1_02380
so part of: sequence
location: 209692..209765
location: region:209692-209765:1
so has part: feature:209692-209765:1:exon
subclass of: SO_0000663

position:209692:1
position: 209692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209765:1
position: 209765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209692-209765:1:exon

NARPIN1_RS01180
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS01180
old locus tag: NARPIN1_02380
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:209726..209728,aa:Met,seq:cat)
SIO_010081: NARPIN1_RS01180
subclass of: SO_0000673
so part of: NARPIN1_RS01180
location: 209692..209765
location: region:209692-209765:1
so has part: feature:209692-209765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209692-209765:1:exon

NARPIN1_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01185
old locus tag: NARPIN1_02390
so part of: sequence
location: 209871..210872
location: region:209871-210872:1
so has part: feature:209871-210872:1:exon
subclass of: SO_0000010

position:209871:1
position: 209871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210872:1
position: 210872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209871-210872:1:exon

NARPIN1_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS01185
old locus tag: NARPIN1_02390
inference: COORDINATES: protein motif:HMM:NF020118.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NusA N-terminal domain-containing protein
translation: MKDILNIVEYLSNDKLIKKDKIFDIIESIIKFSIKKKFKDDFNNIKIIFDRKIGSLKIFKIIKNNNITNEKKTYINKLNTDFFLEEIKDIEYNRTIIQYAKNFIFKKINNLEKLELFNKYKNSMNKVFLCIVKKIYNNKILLLIDNNIEGIIFNKNLLYNDNFKVNDKFKGILYFIKSTKYNIQLFISRIGSTIIRELLNNEIFELNNNTITIVSISREPGIKTKIAVKSNNRNINPIHFLVINKKYVLKLISNEFNKESIDIILWNSNLLEFIKNSIYPINIKSIYFNKKNNNINILINKNDILKVIGKNGINIKLISSLVNHSINISYNKN
SIO_010081: NARPIN1_RS01185
subclass of: SO_0000673
so part of: NARPIN1_RS01185
location: 209871..210872
location: region:209871-210872:1
so has part: feature:209871-210872:1:exon

WP_130579406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209871-210872:1:exon

NARPIN1_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01190
old locus tag: NARPIN1_02400
so part of: sequence
location: 210889..212634
location: region:210889-212634:1
so has part: feature:210889-212634:1:exon
subclass of: SO_0000010

position:210889:1
position: 210889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212634:1
position: 212634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210889-212634:1:exon

NARPIN1_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS01190
old locus tag: NARPIN1_02400
inference: COORDINATES: protein motif:HMM:NF012300.2
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP-binding protein
translation: MSKIINNNLIEINKKINFTKLISKLSLKEKDINYIKSIFNIDNIKIINIDLLKNILNKLNYIIIEEFNDNIDKLYITLKKNNNIDYRPPIITLIGHVDSGKTSILDCIELNNSINNEVRGITQYIRSFKVNYSDNKNFIFIDTPGHESFVNIRNNCIKISDIIILVISVDDILKNNIIDKFINEILYTNLTFKLIIIINKIDKINDFNSLKFKFENNYNSIFKNIDINYDILYLSAKYKKNIDLLINNIKSKFNYIDLKFSKENIAYGIVIESYIDKNMGPTAKIIIKDGTINVGDLILFDYFFCKLKLIIDNNNKINSANPLNIVKIFGLPTLSKIGEKIIILNDIKKIKNIISYRNIIKNKNNLYINKYNDFLNKNKYNLNYIIKTNSIGINDAILHSIKEISNNNCNNININILKIETGILKKDDIYLSLNSNSELLLFNVKIDLNLIKLINNFNIKIKSYSIIYDLIDYIKYSIKNILSLEEKSNIEGNANVIKIFNINNSIIIGCKLENGVFRKKNNIKIFRKDILLYDGNILSMKILKKSVNEVNNNTEFGISINKNNILIKEGDKIISFKEINE
SIO_010081: NARPIN1_RS01190
subclass of: SO_0000673
so part of: NARPIN1_RS01190
location: 210889..212634
location: region:210889-212634:1
so has part: feature:210889-212634:1:exon

WP_130579408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210889-212634:1:exon

NARPIN1_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rbfA
locus tag: NARPIN1_RS01195
old locus tag: NARPIN1_02410
so part of: sequence
location: 212634..212963
location: region:212634-212963:1
so has part: feature:212634-212963:1:exon
subclass of: SO_0000010

position:212963:1
position: 212963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212634-212963:1:exon

NARPIN1_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rbfA
locus tag: NARPIN1_RS01195
old locus tag: NARPIN1_02410
inference: COORDINATES: protein motif:HMM:TIGR00082.1
GO function: GO:0019843 - rRNA binding [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosome-binding factor RbfA
translation: MFYINRLEKDIRYKIYYIILKFINDNRLKNITILDVKLYKDFSIVKIYILHLINNSCNIIKLLNNSSNFIRKKLFKNIKIKKIPKLLFVYDKYVNNTINIINLINNLKY
SIO_010081: NARPIN1_RS01195
subclass of: SO_0000673
so part of: NARPIN1_RS01195
location: 212634..212963
location: region:212634-212963:1
so has part: feature:212634-212963:1:exon

WP_130579410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212634-212963:1:exon

NARPIN1_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: truB
locus tag: NARPIN1_RS01200
old locus tag: NARPIN1_02420
so part of: sequence
location: 212967..213677
location: region:212967-213677:1
so has part: feature:212967-213677:1:exon
subclass of: SO_0000010

position:212967:1
position: 212967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213677:1
position: 213677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212967-213677:1:exon

NARPIN1_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: truB
locus tag: NARPIN1_RS01200
old locus tag: NARPIN1_02420
EC number: 5.4.99.25
inference: COORDINATES: protein motif:HMM:TIGR00431.1
GO function: GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA pseudouridine(55) synthase TruB
translation: MNGLLLLDKPYKWTSRFSLKTVCNLLKNNNAGYYGVLDSIATGILPILFGKNKKISIELSNSDKCYEVIACIGIRTSTYDSEGTIISKLSIINISKHYILSILKKFCGNIKQYSPIYSNVKYLGKPSYKYALNNIEIIKIPRYVNIYNIKFIYLKNNLLKLKILCSKGTYIRSLINDIGNYIGCGAYVYYLRRIKMYNFNESDIISFNYIYKISNFYNFNKYKIMRYLFTKKLDFI
SIO_010081: NARPIN1_RS01200
subclass of: SO_0000673
so part of: NARPIN1_RS01200
location: 212967..213677
location: region:212967-213677:1
so has part: feature:212967-213677:1:exon

WP_130579412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212967-213677:1:exon

NARPIN1_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpsO
locus tag: NARPIN1_RS01205
old locus tag: NARPIN1_02430
pseudo: true
so part of: sequence
location: <213735..213938
location: region:213735-213938:1
so has part: feature:213735-213938:1:exon
subclass of: SO_0000010

position:213735:1
position: 213735
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:213938:1
position: 213938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213735-213938:1:exon

NARPIN1_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpsO
locus tag: NARPIN1_RS01205
old locus tag: NARPIN1_02430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012513191.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 30S ribosomal protein S15
SIO_010081: NARPIN1_RS01205
subclass of: SO_0000673
so part of: NARPIN1_RS01205
location: <213735..213938
location: region:213735-213938:1
so has part: feature:213735-213938:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213735-213938:1:exon

NARPIN1_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: pnp
locus tag: NARPIN1_RS01210
old locus tag: NARPIN1_02440
so part of: sequence
location: 213981..216053
location: region:213981-216053:1
so has part: feature:213981-216053:1:exon
subclass of: SO_0000010

position:213981:1
position: 213981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216053:1
position: 216053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213981-216053:1:exon

NARPIN1_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: pnp
locus tag: NARPIN1_RS01210
old locus tag: NARPIN1_02440
EC number: 2.7.7.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070026.1
GO function: GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyribonucleotide nucleotidyltransferase
translation: MFYSFIKEFKYCGYSIKIEIGNIARQATSSLLISANDTSIIISIVENNKNLLNQNILPLTVNYYERAYASGKFPENFLRREFKLSENEIIMSRLIDRSIRPLFSKNYFNEIQITLTVLSLDPDVNLDIISIIGVSTALSISNIPFNGPIGVSKIGYINNELVLNPNNNDLKNSELDLLISGTLDSITMIELSSNFLEKKIILDAIKLGKKNYSFIIDNINDIKNKININNNLKEIEYNNDISLYNLIYDISYDKFNIAYSIENKNDRLIEIIKIKNNILDQIINILSKNQENNILININNVEKDVVRNKIINNKVRIDGRNYDSIRDISINIGILKRVHGSSIFTRGYTQSLASITLGSEKNGIENSNGIIDNFLFHYNFPPYCVGEIGNYGFPKRREIGHGKLAKKSLIYTMPKFKDFPYSIRVVSEIMESDGSSSMASVCSASLALMDSGVPIKSHIAGIAMGLIKNNNDNIILSDISGNEDNFGDMDMKVSGINNKITSIQMDVKNGLISIDIIDNILDKALISINKIIDIMNSYISCPRKKLSKFAPKIFTINIDKSKIKDVIGKGGSTIKSIMNDTKSLIDINDCGFIKIYSNSDELGKKAINKIINITSYIKNDKIYKGIITKIISNIGILVYLENKKKEGLIKLTSNKLVKNNINSFKIGQEVYVKILNIEKNGKMKLLLNNN
SIO_010081: NARPIN1_RS01210
subclass of: SO_0000673
so part of: NARPIN1_RS01210
location: 213981..216053
location: region:213981-216053:1
so has part: feature:213981-216053:1:exon

WP_130579416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213981-216053:1:exon

NARPIN1_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01215
old locus tag: NARPIN1_02450
so part of: sequence
location: 216064..217635
location: region:216064-217635:1
so has part: feature:216064-217635:1:exon
subclass of: SO_0000010

position:216064:1
position: 216064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217635:1
position: 217635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216064-217635:1:exon

NARPIN1_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
locus tag: NARPIN1_RS01215
old locus tag: NARPIN1_02450
inference: COORDINATES: protein motif:HMM:NF012492.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MSYNKTFLDLGLEVNICNKLSELGFDKPFPIQIESIPKLINGLNIIGNARTGSGKTIAFVTPFLNKIDINLKYPQFLIIEPTRELVIQVSKVIYDISSGIKKINISSLYGGQNYNIQFKSLKDNPNFIIGTPGRLIDHIKKGTLNISKIKGLVIDEADEMLNMGFINDVKYILSNINNKYQIALFSATLSKEIKNIAYKFTDNLVEVVVNDSDCSNSKIEQNYIIIDYNLNKKLVLLTFIEISKFKLCIIFVNTKNLTIEISDLLKKFDYNSSYINGDINQKIREKTIKIFVEEKINILVATDIVARGIDINKVDLIINYDSPNNIDTYIHRIGRTGRAGKDGKSFIFINKNDFKILKIIKNKFNINRYFLPSLEELNKLKESKFIDKIKNSSINIKLIDFNKIITKLLDLFNNDYINLINVILNILNKEKPIILNEKIKDFKNNSIKNKKYYIFKINIGKNNKIDKKFIINILLKNFSITYNNIGYIVIYNYFSKIQLFNFINNIISYNNFLKKNIKLELIK
SIO_010081: NARPIN1_RS01215
subclass of: SO_0000673
so part of: NARPIN1_RS01215
location: 216064..217635
location: region:216064-217635:1
so has part: feature:216064-217635:1:exon

WP_130579418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216064-217635:1:exon

NARPIN1_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: proS
locus tag: NARPIN1_RS01220
old locus tag: NARPIN1_02460
so part of: sequence
location: complement(217637..219316)
location: region:217637-219316:-1
so has part: feature:217637-219316:-1:exon
subclass of: SO_0000010

position:217637:-1
position: 217637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219316:-1
position: 219316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217637-219316:-1:exon

NARPIN1_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: proS
locus tag: NARPIN1_RS01220
old locus tag: NARPIN1_02460
EC number: 6.1.1.15
inference: COORDINATES: protein motif:HMM:TIGR00409.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO process: GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: proline--tRNA ligase
translation: MRTSKYFLYTLKDKKLNTFSFVNDFMIKSGLIRKLSSGIYSYMPIGLKIINKISKLIREEMKKIYATEILMPILQPINICNISNKFNTYKSELLYCNTIKNNNCYILSPTNEEIITNILKKEIKSEKLLPIILFQIQSKFRNELRPKNGLLRTKEFIMKDAYSFHNSKKSLNETYEKILISYKKIFKKLNLNFFINKANSGIIGDNLSHEFHILSKYGENKIGLCEKSNISGNIDIIKNYIKKKNNYFINIKNKIKLINENKVNKNNLIKVFILYSNKNYISSKFIAVVIKYNHKLSLFKINKLKYIQKPIKFANKDEIYSITKTSIDYVGILNIKIPIIIDYDVSIMNNFITGANIDNKFFYGVNWYRDIKLPIIEDIREITYNDKSLFKINSKIIIKKSIEIAHIFKLYDKYSSLYNFFINNKNILMGCYGIGISRIFFSLVEQNYHNNKILWPSNIEPFEISIISINLNNIKIKKISEKIYNFLLKNNIDVLFNDKNEYLGDILYNMDIIGISKLIIISEKNIDKNIIEYIDKKKKNRILINENDFYNKILFILKN
SIO_010081: NARPIN1_RS01220
subclass of: SO_0000673
so part of: NARPIN1_RS01220
location: complement(217637..219316)
location: region:217637-219316:-1
so has part: feature:217637-219316:-1:exon

WP_130579420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217637-219316:-1:exon

NARPIN1_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01225
old locus tag: NARPIN1_02470
so part of: sequence
location: 219472..221029
location: region:219472-221029:1
so has part: feature:219472-221029:1:exon
subclass of: SO_0000573

position:219472:1
position: 219472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221029:1
position: 221029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219472-221029:1:exon

NARPIN1_RS01225
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1971488
locus tag: NARPIN1_RS01225
old locus tag: NARPIN1_02470
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: NARPIN1_RS01225
subclass of: SO_0000673
so part of: NARPIN1_RS01225
location: 219472..221029
location: region:219472-221029:1
so has part: feature:219472-221029:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219472-221029:1:exon

NARPIN1_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01230
old locus tag: NARPIN1_02480
so part of: sequence
location: 221073..221144
location: region:221073-221144:1
so has part: feature:221073-221144:1:exon
subclass of: SO_0000663

position:221073:1
position: 221073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221144:1
position: 221144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221073-221144:1:exon

NARPIN1_RS01230
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS01230
old locus tag: NARPIN1_02480
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:221105..221107,aa:Ala,seq:tgc)
SIO_010081: NARPIN1_RS01230
subclass of: SO_0000673
so part of: NARPIN1_RS01230
location: 221073..221144
location: region:221073-221144:1
so has part: feature:221073-221144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221073-221144:1:exon

NARPIN1_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01235
old locus tag: NARPIN1_02490
so part of: sequence
location: 221162..224066
location: region:221162-224066:1
so has part: feature:221162-224066:1:exon
subclass of: SO_0000573

position:221162:1
position: 221162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224066:1
position: 224066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221162-224066:1:exon

NARPIN1_RS01235
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1971488
locus tag: NARPIN1_RS01235
old locus tag: NARPIN1_02490
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: NARPIN1_RS01235
subclass of: SO_0000673
so part of: NARPIN1_RS01235
location: 221162..224066
location: region:221162-224066:1
so has part: feature:221162-224066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221162-224066:1:exon

NARPIN1_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rrf
locus tag: NARPIN1_RS01240
old locus tag: NARPIN1_02500
so part of: sequence
location: 224117..224231
location: region:224117-224231:1
so has part: feature:224117-224231:1:exon
subclass of: SO_0000573

position:224117:1
position: 224117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224231:1
position: 224231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224117-224231:1:exon

NARPIN1_RS01240
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1971488
gene: rrf
locus tag: NARPIN1_RS01240
old locus tag: NARPIN1_02500
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: NARPIN1_RS01240
subclass of: SO_0000673
so part of: NARPIN1_RS01240
location: 224117..224231
location: region:224117-224231:1
so has part: feature:224117-224231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224117-224231:1:exon

NARPIN1_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
locus tag: NARPIN1_RS01245
old locus tag: NARPIN1_02510
so part of: sequence
location: 224244..224315
location: region:224244-224315:1
so has part: feature:224244-224315:1:exon
subclass of: SO_0000663

position:224244:1
position: 224244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224315:1
position: 224315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224244-224315:1:exon

NARPIN1_RS01245
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1971488
locus tag: NARPIN1_RS01245
old locus tag: NARPIN1_02510
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:224276..224278,aa:Trp,seq:cca)
SIO_010081: NARPIN1_RS01245
subclass of: SO_0000673
so part of: NARPIN1_RS01245
location: 224244..224315
location: region:224244-224315:1
so has part: feature:224244-224315:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224244-224315:1:exon

NARPIN1_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: mnmE
locus tag: NARPIN1_RS01250
old locus tag: NARPIN1_02520
so part of: sequence
location: complement(224320..225741)
location: region:224320-225741:-1
so has part: feature:224320-225741:-1:exon
subclass of: SO_0000010

position:224320:-1
position: 224320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225741:-1
position: 225741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224320-225741:-1:exon

NARPIN1_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: mnmE
locus tag: NARPIN1_RS01250
old locus tag: NARPIN1_02520
inference: COORDINATES: protein motif:HMM:TIGR00450.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
translation: MNNILIDSETIAAISTPYGKGGIGIIRISGDEVEYISNKFFKKIPIIRKAEYLSFHDYKNNEILDKGIVIFFKKPNSFTGENLLEFQCHGNPHMMSYILDNILLCPNVRLAYPGEFTKRAYLNNKLDLFQSESIINLINSNSLLESRLYSKSVQGIFSNEIKNLIKKLDEIKILIETFIDFSYENIDINLNLKIKFLLKNIINKINNLILNSEKSYLISKGIIISIIGEPNVGKSSLFNLLINKDRSIITSIPGTTRDSINEILVLNNSININLFDTAGIHNTDDIIEKLGIKKTKELINKSDLLILVIDNIDIRNNLLIKNKLNILKNKVNKYIFNIINNTCIPIIIVKNKCDLSKDDIKIYDNYFEKNISLITISAKLNTGINLIIKNIEQILKLNNINEIKFLISKRHIDILKKSFNILNIDENKFDISILSDNISLSQKELLSLININKNTHNSEKILSEIFSKFCIGK
SIO_010081: NARPIN1_RS01250
subclass of: SO_0000673
so part of: NARPIN1_RS01250
location: complement(224320..225741)
location: region:224320-225741:-1
so has part: feature:224320-225741:-1:exon

WP_130579422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224320-225741:-1:exon

NARPIN1_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rnpA
locus tag: NARPIN1_RS01255
old locus tag: NARPIN1_02530
so part of: sequence
location: complement(225743..226102)
location: region:225743-226102:-1
so has part: feature:225743-226102:-1:exon
subclass of: SO_0000010

position:225743:-1
position: 225743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226102:-1
position: 226102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225743-226102:-1:exon

NARPIN1_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rnpA
locus tag: NARPIN1_RS01255
old locus tag: NARPIN1_02530
EC number: 3.1.26.5
inference: COORDINATES: protein motif:HMM:NF013022.2
GO function: GO:0004526 - ribonuclease P activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease P protein component
translation: MKLNSFKKKYKLSFSYGKIISNNFFFKKSDFFKINYSNNNLNYPRLGIYISKKCIKLSNKRNLLKRLIREYFRINKYKIYNLDYILKLKYNFNFNYNYNIDYFKKDINKIFNFFIKRNI
SIO_010081: NARPIN1_RS01255
subclass of: SO_0000673
so part of: NARPIN1_RS01255
location: complement(225743..226102)
location: region:225743-226102:-1
so has part: feature:225743-226102:-1:exon

WP_172597013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225743-226102:-1:exon

NARPIN1_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 1971488
gene: rpmH
locus tag: NARPIN1_RS01260
old locus tag: NARPIN1_02540
so part of: sequence
location: complement(226104..226253)
location: region:226104-226253:-1
so has part: feature:226104-226253:-1:exon
subclass of: SO_0000010

position:226104:-1
position: 226104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226253:-1
position: 226253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226104-226253:-1:exon

NARPIN1_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1971488
gene: rpmH
locus tag: NARPIN1_RS01260
old locus tag: NARPIN1_02540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000831904.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L34
translation: MKRTFQPSRIKRIRKIGFRIRMSTKSGRRILSNRRNKKRKNLILIKYKY
SIO_010081: NARPIN1_RS01260
subclass of: SO_0000673
so part of: NARPIN1_RS01260
location: complement(226104..226253)
location: region:226104-226253:-1
so has part: feature:226104-226253:-1:exon

WP_130579426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226104-226253:-1:exon