Homalodisca vitripennis mitochondrion, complete genome.
type: Entry
definition: Homalodisca vitripennis mitochondrion, complete genome.
sequence version: NC_006899.1
sequence date: 2023-04-03
sequence: sequence
division: INV
label: NC_006899.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Homalodisca vitripennis (glassy-winged sharpshooter)
organism: Homalodisca vitripennis
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Auchenorrhyncha; Membracoidea; Cicadellidae; Cicadellinae; Proconiini; Homalodisca.
reference: 1
reference: 2
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence was derived from AY875213.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 15304
topology: circular
so has quality: SO_0000988
location: 1..15304
location: region:1-15304:1
RO_0002162: 197043

NC_006899
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Direct Submission
journal: Submitted (02-APR-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

2
title: Direct Submission
author: Baumann, L.
author: Baumann, P.
journal: Submitted (04-JAN-2005) Microbiology, University of California, One Shields Ave., Davis, CA 95616, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15304:1
position: 15304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-15304:1:source
so part of: sequence
organism: Homalodisca vitripennis
organelle: mitochondrion
mol type: genomic DNA

197043
type: Taxonomy
SIO_000068: taxonomy

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 197043
gene: COX1
so part of: sequence
location: 1..1534
location: region:1-1534:1
so has part: feature:1-1534:1:exon
subclass of: SO_0000010

3332277
type: Gene
SIO_000068: ncbigene

position:1534:1
position: 1534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1534:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 197043
gene: COX1
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:1534,aa:TERM)
transl table: 5
product: cytochrome c oxidase subunit I
translation: MNKWLFSTNHKDIGTLYFLFGIWSGMVGMMLSMIIRIELAQPGPFLMNDQLYNVIVTSHAFIMIFFMVMPIMIGGFGNWLLPLMIGAPDMAFPRMNNMSFWLLPPSLSLLMVSSMVEMGVGTGWTVYPPLSSNVAHSGPSVDLAIFSLHLAGISSILGAVNFITTVINMRTIGMNFDRTPLFVWSVLITAILLLLSLPVLAGAITMLLTDRNINTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIITQESGKNESFGYIGMVYAMMSIGLLGFVVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATMHGMSNDMSISMMWSAGFVFLFTMGGLTGIVLSNSSIDVILHDTYYVVAHFHYVLSMGAVFAIMAGFIQWYPLFTGMTMNPKWLKIQFFTMFIGVNLTFFPQHFLGLSGLPRRYSDYPDTYLTWNLVSSLGSLISLISIMIMMFIIWESMISKRMVISSNNNANSIEWLQKLPPEEHSYSELPMLTN
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 1..1534
location: region:1-1534:1
so has part: feature:1-1534:1:exon

YP_214927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1534:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: 1535..1599
location: region:1535-1599:1
so has part: feature:1535-1599:1:region

position:1535:1
position: 1535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1599:1
position: 1599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1535-1599:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 197043
gene: COX2
so part of: sequence
location: 1600..2278
location: region:1600-2278:1
so has part: feature:1600-2278:1:exon
subclass of: SO_0000010

3332284
type: Gene
SIO_000068: ncbigene

position:1600:1
position: 1600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2278:1
position: 2278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1600-2278:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 197043
gene: COX2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:2278,aa:TERM)
transl table: 5
product: cytochrome c oxidase subunit II
translation: MCNWKMLSFQDAVSPIMEQLIMFHDHTMMILIMITTVVSYMMVMLFMNKYINRFLLEGQLIELIWTILPAVLLIFIALPSLRILYMIEEINNPLITIKAIGHQWYWSYEYSDFKKIEFDSYMKPTINLESSEFRLLDTDNRIVLPYNIQIRILVTSTDVIHSWTIPSIGVKIDASPGRINQGSILMNRPGLFFGQCSEICGSNHSFMPIVIESVNLKSFINWLNSY
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 1600..2278
location: region:1600-2278:1
so has part: feature:1600-2278:1:exon

YP_214928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1600-2278:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Lys
anticodon: (pos:2310..2312,aa:Lys,seq:ctt)
so part of: sequence
location: 2279..2350
location: region:2279-2350:1
so has part: feature:2279-2350:1:region

position:2279:1
position: 2279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2350:1
position: 2350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2279-2350:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Asp
anticodon: (pos:2380..2382,aa:Asp,seq:gtc)
so part of: sequence
location: 2350..2412
location: region:2350-2412:1
so has part: feature:2350-2412:1:region

position:2412:1
position: 2412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2350-2412:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 197043
gene: ATP8
so part of: sequence
location: 2413..2565
location: region:2413-2565:1
so has part: feature:2413-2565:1:exon
subclass of: SO_0000010

3332282
type: Gene
SIO_000068: ncbigene

position:2413:1
position: 2413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2565:1
position: 2565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2413-2565:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 197043
gene: ATP8
codon start: 1
transl table: 5
product: ATP synthase F0 subunit 8
translation: MPQMSPMWWMTLMFMFIMTLMLIMAMVYFNFNLMSSSKKEYKVVQYNWKW
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 2413..2565
location: region:2413-2565:1
so has part: feature:2413-2565:1:exon

YP_214929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2413-2565:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 197043
gene: ATP6
so part of: sequence
location: 2559..3212
location: region:2559-3212:1
so has part: feature:2559-3212:1:exon
subclass of: SO_0000010

3332278
type: Gene
SIO_000068: ncbigene

position:2559:1
position: 2559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3212:1
position: 3212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2559-3212:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 197043
gene: ATP6
codon start: 1
transl table: 5
product: ATP synthase F0 subunit 6
translation: MMANLFSVFDPCTGYSSMNWMSTFIFMFLIPLKFWLMPNKISLLFNSLLSILHNENKSLMKLKGTSLIMMSLFILILFNNLMGLLPYIFTSSSHLLFCLSLALPLWLSLMIYGWINKTNHMFIHLVPTGTPGILMPFMVLIETISNLIRPGSLAVRLTANMIAGHLLMSLLGNNATNFYMILVLMIMFMILMTFELAVAIIQSYVFMTLTNLYSSEI
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 2559..3212
location: region:2559-3212:1
so has part: feature:2559-3212:1:exon

YP_214930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2559-3212:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 197043
gene: COX3
so part of: sequence
location: 3214..3993
location: region:3214-3993:1
so has part: feature:3214-3993:1:exon
subclass of: SO_0000010

3332276
type: Gene
SIO_000068: ncbigene

position:3214:1
position: 3214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3993:1
position: 3993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3214-3993:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 197043
gene: COX3
codon start: 1
transl table: 5
product: cytochrome c oxidase subunit III
translation: MNNHPFHLVDNSPWPIIGSIGVMTITSGMVMWFHKFNMMLFILGFIIVILTMIQWWRDVTREATFQGLHTKKVSLSMKWGMVLFIVSEVLFFSSFFWSFFHSSLSPTIEIGSQWPPVGIKTFNPMNIPLLNTMILLYSGVTMTWAHNALINKNYTQVVQSMIVTVIMGMYFTALQTYEYIESPFCISDSIYGSTFFMSTGFHGIHVIIGTIFIIVSLLRMLKLHFSSTRHVGFEASAWYWHFVDVVWLFLYISIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 3214..3993
location: region:3214-3993:1
so has part: feature:3214-3993:1:exon

YP_214931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3214-3993:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Gly
anticodon: (pos:4023..4025,aa:Gly,seq:tcc)
so part of: sequence
location: 3993..4055
location: region:3993-4055:1
so has part: feature:3993-4055:1:region

position:4055:1
position: 4055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3993-4055:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 197043
gene: ND3
so part of: sequence
location: 4056..4409
location: region:4056-4409:1
so has part: feature:4056-4409:1:exon
subclass of: SO_0000010

3332279
type: Gene
SIO_000068: ncbigene

position:4056:1
position: 4056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4409:1
position: 4409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4056-4409:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 197043
gene: ND3
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 3
translation: MNLTMIFFFITMILMLIIMMLIIMIGKKSIIEYQKSTPFECGFNPISHKRLPFSIHFFLIAVLFLIFDIEIIIILPMILTMYNVNMMTWLLTSIMFTLILMIGLYHEWYNGMLNWAK
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 4056..4409
location: region:4056-4409:1
so has part: feature:4056-4409:1:exon

YP_214932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4056-4409:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Ala
anticodon: (pos:4437..4439,aa:Ala,seq:tgc)
so part of: sequence
location: 4408..4469
location: region:4408-4469:1
so has part: feature:4408-4469:1:region

position:4408:1
position: 4408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4469:1
position: 4469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4408-4469:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Arg
so part of: sequence
location: 4470..4531
location: region:4470-4531:1
so has part: feature:4470-4531:1:region

position:4470:1
position: 4470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4531:1
position: 4531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4470-4531:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Asn
anticodon: (pos:4564..4566,aa:Asn,seq:gtt)
so part of: sequence
location: 4532..4596
location: region:4532-4596:1
so has part: feature:4532-4596:1:region

position:4532:1
position: 4532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4596:1
position: 4596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4532-4596:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Ser
anticodon: (pos:4621..4623,aa:Ser,seq:gct)
codon recognized: AGN
so part of: sequence
location: 4596..4662
location: region:4596-4662:1
so has part: feature:4596-4662:1:region

position:4662:1
position: 4662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4596-4662:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Glu
anticodon: (pos:4690..4692,aa:Glu,seq:ttc)
so part of: sequence
location: 4662..4724
location: region:4662-4724:1
so has part: feature:4662-4724:1:region

position:4724:1
position: 4724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4662-4724:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Phe
so part of: sequence
location: complement(4724..4786)
location: region:4724-4786:-1
so has part: feature:4724-4786:-1:region

position:4724:-1
position: 4724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4786:-1
position: 4786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4724-4786:-1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 197043
gene: ND5
so part of: sequence
location: complement(4787..6464)
location: region:4787-6464:-1
so has part: feature:4787-6464:-1:exon
subclass of: SO_0000010

3332285
type: Gene
SIO_000068: ncbigene

position:4787:-1
position: 4787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6464:-1
position: 6464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4787-6464:-1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 197043
gene: ND5
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:complement(4787),aa:TERM)
transl table: 5
product: NADH dehydrogenase subunit 5
translation: MLLKLNVYLYWFLILFIFSVFLFISSLYFMYNGIFLMLEWNIMLINSLSINYLMIFDWVSISFSSVVMLISSMVVFYSSDYMGFGYYNSNRFLFLVILFVFSMILMIISPNLISILLGWDGLGLVSYCLVIYYNSMKSYLAGMITCLTNRIGDIGLLISACWIMSYGGWHFMYYLDYYNEYIFYLMTISCFTKSAQIPFSCWLPAAMAAPTPVSSLVHSSTLVTAGVYLLIRFYNSFNFNNYMFLFISLVTMTFSSICAIYEFDLKKIIALSTLSQLGLMMSSLFLGLLDLSFFHLLSHAMFKSLLFLCSGIFIFYMNDNQDIRLMGSVCMLMPFTTSCFNIANLTLCGIPFLSGFYSKDMIIEYMVSNQLNYLVFVIFYFSLGLTAFYSFRLFYYSMIHNNKFISMNFIYDEYLYMKLSIFILTLFSIFTGCMMLWLMNFDFYFILLPMKLSMASLLLVLMGIWLGMESCKFNYYFNMSYYLFNGNMWFMSSYLNFLYKNVYLFSENSKSNSLMWSEYYGPMGISYYLLNLSNFIQFYSMNNLKVFLLTFLIWFMILI
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: complement(4787..6464)
location: region:4787-6464:-1
so has part: feature:4787-6464:-1:exon

YP_214933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4787-6464:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-His
anticodon: (pos:complement(6490..6492),aa:His,seq:gtg)
so part of: sequence
location: complement(6462..6522)
location: region:6462-6522:-1
so has part: feature:6462-6522:-1:region

position:6462:-1
position: 6462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6522:-1
position: 6522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6462-6522:-1:region

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 197043
gene: ND4
so part of: sequence
location: complement(6522..7841)
location: region:6522-7841:-1
so has part: feature:6522-7841:-1:exon
subclass of: SO_0000010

3332286
type: Gene
SIO_000068: ncbigene

position:7841:-1
position: 7841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6522-7841:-1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 197043
gene: ND4
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 4
translation: MMKFILFVFFLTPLLFINYWFLIQFFFIFLMLLFLVNSCYGFFGSVSYFFGIDNISYGLIILSIMISSLMILSSSSIFGSLMSSFFLFCCYLLMISLILIFCVMKMIIMYFFFEFSLIPLFLIIMGWGYQPERLISGLYLFFYTLLASLPLLLVIIYLYMSFGSMSFDYNFGVSLSFMMHFMMLIAFMVKLPLYMFHLWLPKAHVQAPVSGSMILAGLLLKIGGYGILRFMFIYEYLFINFSWFWYSLSLVGSCLVSLVCLIQGDVKCLIAYSSIAHMCMCLMGMLSMTKFGLIGSYLMMIGHGLCSSGLFCLANISYERFLSRSFFINKGLMLFMPSMSMMWFMFCSFNMSCPPSINFISEIMIMNSMIMYWSGSLIFIIFMSFFTACFSFYLFSFTQHGKYHNLYCYSLGNVREYLLMIVHLMPLFLIILFMDCIFW
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: complement(6522..7841)
location: region:6522-7841:-1
so has part: feature:6522-7841:-1:exon

YP_214934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6522-7841:-1:exon

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 197043
gene: ND4L
so part of: sequence
location: complement(7835..8113)
location: region:7835-8113:-1
so has part: feature:7835-8113:-1:exon
subclass of: SO_0000010

3332275
type: Gene
SIO_000068: ncbigene

position:7835:-1
position: 7835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8113:-1
position: 8113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7835-8113:-1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 197043
gene: ND4L
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 4L
translation: MNFLFFLFMFVFSLISMIYIRNHILLCLLSLEFLVLSLLCMIMLICLMSNYTFYLYIYFMTFYVCEGVLGLSILVSLIRSHGNDYLNSIMLW
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: complement(7835..8113)
location: region:7835-8113:-1
so has part: feature:7835-8113:-1:exon

YP_214935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7835-8113:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Thr
anticodon: (pos:8147..8149,aa:Thr,seq:tgt)
so part of: sequence
location: 8116..8180
location: region:8116-8180:1
so has part: feature:8116-8180:1:region

position:8116:1
position: 8116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8180:1
position: 8180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8116-8180:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Pro
anticodon: (pos:complement(8211..8213),aa:Pro,seq:tgg)
so part of: sequence
location: complement(8181..8242)
location: region:8181-8242:-1
so has part: feature:8181-8242:-1:region

position:8181:-1
position: 8181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8242:-1
position: 8242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8181-8242:-1:region

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 197043
gene: ND6
so part of: sequence
location: 8245..8736
location: region:8245-8736:1
so has part: feature:8245-8736:1:exon
subclass of: SO_0000010

3332281
type: Gene
SIO_000068: ncbigene

position:8245:1
position: 8245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8736:1
position: 8736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8245-8736:1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 197043
gene: ND6
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 6
translation: MKITLLKIMIIIPMMLILLKNPMSMGMMLIVQTLFMCMLMNKMMITTWFMMITFLMMIGGLMILFMYMSSIASNEKFKLNMNMTLTMIIFIIISDEMMNENQVMDKLELSENNPMEKISMIKLYNEKSMIITMIMVMFLLLTMISTTKIVKLHEGPLRKKTYE
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: 8245..8736
location: region:8245-8736:1
so has part: feature:8245-8736:1:exon

YP_214936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8245-8736:1:exon

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 197043
gene: CYTB
so part of: sequence
location: 8729..9865
location: region:8729-9865:1
so has part: feature:8729-9865:1:exon
subclass of: SO_0000010

3332283
type: Gene
SIO_000068: ncbigene

position:8729:1
position: 8729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9865:1
position: 9865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8729-9865:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 197043
gene: CYTB
codon start: 1
transl table: 5
product: cytochrome b
translation: MNKPMRKNNPIIKIINYSLIDLPAPLNLSSWWNFGSILGLCLTIQLITGILLSMHYTSNIEMAFNSVNHITRDVNYGWLMRTIHSNGASMFFICMYLHTGRGMYYGSYKFIKTWMVGVMIMLLTMATAFLGYVLPWGQMSFWGATVITNLLSALPYIGSMLVNWIWGGFAVDNATLSRFFSLHFLLPFIIMMMTIIHLFFLHMTGSNNPIGINSNIDKIPFHPYFSIKDLMGFSIIITMLLILNMTEPYMLSDPDNFTPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVMALFLSILILMILPFSMKMKFKGIEFYPINQINFWMFSSTVILLTWIGARPVELPYTETGMMLTVMYFIYFISDPLISKMWDKIIK
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 8729..9865
location: region:8729-9865:1
so has part: feature:8729-9865:1:exon

YP_214937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8729-9865:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Ser
anticodon: (pos:9894..9896,aa:Ser,seq:tga)
codon recognized: UCN
so part of: sequence
location: 9864..9925
location: region:9864-9925:1
so has part: feature:9864-9925:1:region

position:9864:1
position: 9864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9925:1
position: 9925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9864-9925:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 197043
gene: ND1
so part of: sequence
location: complement(9925..10857)
location: region:9925-10857:-1
so has part: feature:9925-10857:-1:exon
subclass of: SO_0000010

3332274
type: Gene
SIO_000068: ncbigene

position:9925:-1
position: 9925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10857:-1
position: 10857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9925-10857:-1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 197043
gene: ND1
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 1
translation: MFFITSLILIILVMVSVGFFTLLERKVLSYMQIRKGPNKVGFMGLLQPFSDGIKLFLKEQVWPIDSNSLIYYLCPLFSLIQSLFIWCLFPFYWNCISFVFGMLFFLCCSSLSIYGLIICGWSSNSSYSMLGCIRSISQAISYEVSLSLIMLCFFLMINGYNFINFFVFQISSWFFFCSVPMFLCWFSCCLAESNRTPFDFSEGESELVSGFNIEYGSGGFALLFISEYASIIFISSLTVIIFFGGDFYSFIFFYQVNFFCFLFIWVRCSFPRFRYDKLMYLAWKCYLPISLSFIIFFVFIKVLVFYHFFL
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: complement(9925..10857)
location: region:9925-10857:-1
so has part: feature:9925-10857:-1:exon

YP_214938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9925-10857:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Leu
anticodon: (pos:complement(10890..10892),aa:Leu,seq:tag)
codon recognized: CUN
so part of: sequence
location: complement(10858..10923)
location: region:10858-10923:-1
so has part: feature:10858-10923:-1:region

position:10858:-1
position: 10858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10923:-1
position: 10923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10858-10923:-1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 197043
product: l-rRNA
so part of: sequence
location: complement(10920..12120)
location: region:10920-12120:-1
so has part: feature:10920-12120:-1:region

position:10920:-1
position: 10920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12120:-1
position: 12120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10920-12120:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Val
anticodon: (pos:complement(12152..12154),aa:Val,seq:tac)
so part of: sequence
location: complement(12121..12185)
location: region:12121-12185:-1
so has part: feature:12121-12185:-1:region

position:12121:-1
position: 12121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12185:-1
position: 12185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12121-12185:-1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 197043
product: s-rRNA
so part of: sequence
location: complement(12186..12913)
location: region:12186-12913:-1
so has part: feature:12186-12913:-1:region

position:12186:-1
position: 12186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12913:-1
position: 12913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12186-12913:-1:region

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 197043
rpt type: direct
so part of: sequence
location: order(12922..12941,13210..13229)
location: region:12922-13229:1
so has part: feature:12922-12941:1:region
so has part: feature:13210-13229:1:region

position:12922:1
position: 12922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13229:1
position: 13229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12922-12941:1:region

position:12941:1
position: 12941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13210-13229:1:region

position:13210:1
position: 13210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 197043
rpt type: inverted
so part of: sequence
location: order(12988..13066,13073..13151)
location: region:12988-13151:1
so has part: feature:12988-13066:1:region
so has part: feature:13073-13151:1:region

position:12988:1
position: 12988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13151:1
position: 13151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12988-13066:1:region

position:13066:1
position: 13066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13073-13151:1:region

position:13073:1
position: 13073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 197043
rpt type: tandem
rpt unit range: 13312..13751
so part of: sequence
location: 13312..13751
location: region:13312-13751:1
so has part: feature:13312-13751:1:region

position:13312:1
position: 13312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13751:1
position: 13751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13312-13751:1:region

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 197043
rpt type: inverted
so part of: sequence
location: order(13315..13328,13339..13352)
location: region:13315-13352:1
so has part: feature:13315-13328:1:region
so has part: feature:13339-13352:1:region

position:13315:1
position: 13315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13352:1
position: 13352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13315-13328:1:region

position:13328:1
position: 13328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13339-13352:1:region

position:13339:1
position: 13339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 197043
rpt type: inverted
so part of: sequence
location: order(13436..13449,13460..13473)
location: region:13436-13473:1
so has part: feature:13436-13449:1:region
so has part: feature:13460-13473:1:region

position:13436:1
position: 13436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13473:1
position: 13473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13436-13449:1:region

position:13449:1
position: 13449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13460-13473:1:region

position:13460:1
position: 13460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 197043
rpt type: inverted
so part of: sequence
location: order(13557..13570,13581..13594)
location: region:13557-13594:1
so has part: feature:13557-13570:1:region
so has part: feature:13581-13594:1:region

position:13557:1
position: 13557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13594:1
position: 13594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13557-13570:1:region

position:13570:1
position: 13570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13581-13594:1:region

position:13581:1
position: 13581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 197043
rpt type: inverted
so part of: sequence
location: order(13678..13691,13702..13715)
location: region:13678-13715:1
so has part: feature:13678-13691:1:region
so has part: feature:13702-13715:1:region

position:13678:1
position: 13678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13715:1
position: 13715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13678-13691:1:region

position:13691:1
position: 13691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13702-13715:1:region

position:13702:1
position: 13702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Ile
anticodon: (pos:13976..13978,aa:Ile,seq:gat)
so part of: sequence
location: 13947..14011
location: region:13947-14011:1
so has part: feature:13947-14011:1:region

position:13947:1
position: 13947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14011:1
position: 14011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13947-14011:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Gln
anticodon: (pos:complement(14044..14046),aa:Gln,seq:ttg)
so part of: sequence
location: complement(14009..14076)
location: region:14009-14076:-1
so has part: feature:14009-14076:-1:region

position:14009:-1
position: 14009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14076:-1
position: 14076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14009-14076:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Met
anticodon: (pos:14111..14113,aa:Met,seq:cat)
so part of: sequence
location: 14081..14148
location: region:14081-14148:1
so has part: feature:14081-14148:1:region

position:14081:1
position: 14081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14148:1
position: 14148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14081-14148:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 197043
gene: ND2
so part of: sequence
location: 14149..15120
location: region:14149-15120:1
so has part: feature:14149-15120:1:exon
subclass of: SO_0000010

3332280
type: Gene
SIO_000068: ncbigene

position:14149:1
position: 14149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15120:1
position: 15120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14149-15120:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 197043
gene: ND2
codon start: 1
transl table: 5
product: NADH dehydrogenase subunit 2
translation: MFINSNKLLFANTMIVGVMVSICSNNWFMIWSGMEISLMCLTPLMSGYNMITSECMMKHFIVQGVSSSILILGLVMSLLYFNYSNNLVLISVLIKLGMAPFHNWVLVVVEGLSYWVNFMLLTLIKIAPLTLMSYINLNTNFYVILSLIVGSLFALNQSSIRKIMAYSSIFNLGFMSISSMNNSIWVIYFMIYSLILSNLFFFMKKLNINYINQIIINEFTPEVSISIWILVLSLGGMPPLIEFMGKLMVFEMLMSMGQILILTIMVLTSLLVMFYYIRMMYLSLMFSSLILKWNKLNLINMTIIIFLLNFMMSPMFIMIKSLI
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 14149..15120
location: region:14149-15120:1
so has part: feature:14149-15120:1:exon

YP_214939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14149-15120:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Trp
anticodon: (pos:15150..15152,aa:Trp,seq:tca)
so part of: sequence
location: 15119..15182
location: region:15119-15182:1
so has part: feature:15119-15182:1:region

position:15119:1
position: 15119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15182:1
position: 15182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15119-15182:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Cys
anticodon: (pos:complement(15203..15205),aa:Cys,seq:gca)
so part of: sequence
location: complement(15175..15235)
location: region:15175-15235:-1
so has part: feature:15175-15235:-1:region

position:15175:-1
position: 15175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15235:-1
position: 15235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15175-15235:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 197043
product: tRNA-Tyr
anticodon: (pos:complement(15269..15271),aa:Tyr,seq:gta)
so part of: sequence
location: complement(15237..15300)
location: region:15237-15300:-1
so has part: feature:15237-15300:-1:region

position:15237:-1
position: 15237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15300:-1
position: 15300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15237-15300:-1:region