Acidibrevibacterium fodinaquatile strain G45-3 plasmid unnamed1, complete sequence.
type: Entry
definition: Acidibrevibacterium fodinaquatile strain G45-3 plasmid unnamed1, complete sequence.
sequence version: NZ_CP029177.1
sequence date: 2023-03-19
sequence: sequence
division: CON
label: NZ_CP029177.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN09005679
keyword: RefSeq
source: Acidibrevibacterium fodinaquatile
organism: Acidibrevibacterium fodinaquatile
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidibrevibacterium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP029177.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Celera Assembler v. V8.3\nExpected Final Version :: yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/19/2023 01:55:21\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,852\nCDSs (total) :: 3,796\nGenes (coding) :: 3,682\nCDSs (with protein) :: 3,682\nGenes (RNA) :: 56\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 4\nPseudo Genes (total) :: 114\nCDSs (without protein) :: 114\nPseudo Genes (ambiguous residues) :: 0 of 114\nPseudo Genes (frameshifted) :: 29 of 114\nPseudo Genes (incomplete) :: 101 of 114\nPseudo Genes (internal stop) :: 12 of 114\nPseudo Genes (multiple problems) :: 26 of 114\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 68344
topology: circular
so has quality: SO_0000988
location: 1..68344
location: region:1-68344:1
RO_0002162: 1969806

NZ_CP029177
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN09005679
type: BioSample
SIO_000068: biosample

1
title: Acidisphaera fodiniaquatilis sp. nov., isolated from acidic mine drainage, and emended description of the genus Acidisphaera
author: Muhadesi, J.-B.
journal: Unpublished

2
title: Direct Submission
author: Muhadesi, J.-B.
journal: Submitted (01-MAY-2018) Chinese Academic of Science, Institute of Microbiology, Beichen West Road, Beijing 100101, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68344:1
position: 68344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-68344:1:source
so part of: sequence
organism: Acidibrevibacterium fodinaquatile
mol type: genomic DNA
strain: G45-3
isolation source: acidic mine water
type material: type strain of Acidibrevibacterium fodinaquatile
plasmid: unnamed1
country: China
collection date: 2015

1969806
type: Taxonomy
SIO_000068: taxonomy

DEF76_RS18465
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
gene: istB
locus tag: DEF76_RS18465
pseudo: true
so part of: sequence
location: complement(join(67814..68344,1..223))
location: region:1-68344:-1
so has part: feature:1-223:-1:exon
so has part: feature:67814-68344:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68344:-1
position: 68344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-223:-1:exon

position:223:-1
position: 223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:67814-68344:-1:exon

position:67814:-1
position: 67814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DEF76_RS18465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
gene: istB
locus tag: DEF76_RS18465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003537795.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
SIO_010081: DEF76_RS18465
subclass of: SO_0000673
so part of: DEF76_RS18465
location: complement(join(67814..68344,1..223))
location: region:1-68344:-1
so has part: feature:1-223:-1:exon
so has part: feature:67814-68344:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67814-68344:-1:exon

DEF76_RS18470
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
gene: istA
locus tag: DEF76_RS18470
so part of: sequence
location: complement(245..1786)
location: region:245-1786:-1
so has part: feature:245-1786:-1:exon
subclass of: SO_0000010

position:245:-1
position: 245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1786:-1
position: 1786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245-1786:-1:exon

DEF76_RS18470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
gene: istA
locus tag: DEF76_RS18470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003601684.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MPAKRELTMRQIRQTLRLASDGISARAMGRMLGVARSTIQDNLKRAQAAGLAWPLPADLSDAVLEERLFARSGAPRGVRRRAEPVWSELVCEFKRPGVNLMVLWEEYRAGHPEGYSYSRFCDLFREFEARLSPVMRQEHRAGDKVFVDYSGKKLGITDPATGIVRMAEIFVAVLGASNYTYAEASWTQTLPDWIGAHSRMFRFFGGVPRLIVPDNLKSGVNKASFYDPEINLSYGRMASHYGVGVLPARPRRPKDKAKVEAGVRFAQSYILGRLRQQTFFSLAEANQAIAGMVERINAHVMRRLGVSRRHLFETIERQALAALPETDHEFAEWGFARVSLDYHVEVCGFFYSVPHQLIRQQVDTRATERMVEIFHQGKRVAVHQRRYGGPRHGTAPEHMPSAHRRYAAWTPERFRSWGASIGPQTEGLIIAILANRPHPEQGFRTCLGILRLFKELDRPRAEAVAARAVAFGAFNYKSIASIIASKLDQTASPPDEAQAVLTHGNLRGAEYFH
SIO_010081: DEF76_RS18470
subclass of: SO_0000673
so part of: DEF76_RS18470
location: complement(245..1786)
location: region:245-1786:-1
so has part: feature:245-1786:-1:exon

WP_114911000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245-1786:-1:exon

DEF76_RS18475
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18475
so part of: sequence
location: 2071..2889
location: region:2071-2889:1
so has part: feature:2071-2889:1:exon
subclass of: SO_0000010

position:2071:1
position: 2071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2889:1
position: 2889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2071-2889:1:exon

DEF76_RS18475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18475
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPVQFRPFRTVVGQKDYRKREKGNSRFLDDRHEENSVFHEKKNYANIPFMKTIVIANQKGGSGKSTITVHLAAAAEAAGDGPVVISDTDPQGTAADWFNQRKKLGIDTPRYSALALADLNDRVDALDAAGAAYLFIDTAPSVGAVNAELFALADLVLIPLNPTPADLRALVKGLPLVRQSGRPFQFVLTRVRPNLRNNDGATVALGALGLVLTTRMHERVIYAEAFAHGKTAIETDPRGTAAQEVAALWGEVRDRLENEKEGKTRKREKRNS
SIO_010081: DEF76_RS18475
subclass of: SO_0000673
so part of: DEF76_RS18475
location: 2071..2889
location: region:2071-2889:1
so has part: feature:2071-2889:1:exon

WP_162800766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2071-2889:1:exon

DEF76_RS18480
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18480
so part of: sequence
location: 2903..3208
location: region:2903-3208:1
so has part: feature:2903-3208:1:exon
subclass of: SO_0000010

position:2903:1
position: 2903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3208:1
position: 3208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2903-3208:1:exon

DEF76_RS18480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013635138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKRPAVNLAELTAEAAAPMTEAVQRAPRPPMPAPVTAELAPARHVAEMKVKTENLQALAFKVPPAFRKRFRQRAADADLKLNELLFESLDAWEEKNGIKK
SIO_010081: DEF76_RS18480
subclass of: SO_0000673
so part of: DEF76_RS18480
location: 2903..3208
location: region:2903-3208:1
so has part: feature:2903-3208:1:exon

WP_114914001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2903-3208:1:exon

DEF76_RS18485
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18485
so part of: sequence
location: 3448..3642
location: region:3448-3642:1
so has part: feature:3448-3642:1:exon
subclass of: SO_0000010

position:3448:1
position: 3448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3642:1
position: 3642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3448-3642:1:exon

DEF76_RS18485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013635139.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix protein, CopG family
translation: MQKTSTTYTRQYRERLRAAGGEEVLFQLPRETIALLDELKERQGLRNRSLALLQLIERGMQATR
SIO_010081: DEF76_RS18485
subclass of: SO_0000673
so part of: DEF76_RS18485
location: 3448..3642
location: region:3448-3642:1
so has part: feature:3448-3642:1:exon

WP_114914002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3448-3642:1:exon

DEF76_RS18490
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
gene: repC
locus tag: DEF76_RS18490
so part of: sequence
location: 3835..5223
location: region:3835-5223:1
so has part: feature:3835-5223:1:exon
subclass of: SO_0000010

position:3835:1
position: 3835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5223:1
position: 5223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3835-5223:1:exon

DEF76_RS18490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
gene: repC
locus tag: DEF76_RS18490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013635140.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: METESATGAGKRGFAGGPTGLRRLTPGLLAAERAAAEFAGLPEGVAVPGQVLAAFKAAAPCLGLSPRLVHAVDWLFRFTQPQDWGRGGRPIVWPSAAMQQEALGLSATRVKALNRALIEAGLVTMKDSPNGKRYGRRDAQRRIIEAYGFDLSPLAARYQEFLRLAEAARVERAEIGRLRRRATIARNGIIQSLETAAEYGFWGEEWARLERETKELARVLRRLETLAEIALAVETLERRQRAARERLENLLSGAGEIAAKAVDSDPKGTENGPHQYTYKRSLDPEQDTVMAPEEGSAGAAGIFSELGTVAAAAPAKIGAEGGQTKPRDNGSGKILRLSADELAQLAPRLRVYLGTAAPGWPEVVTAADWLRGELGVSQSLWGEACLAMGREQAAIAIAVVSAKDPAHFRTTPGGYFYGMVAKAKAGELNLFRTIWGLRQQVQAKTGRRPGKTGEGRGSARWH
SIO_010081: DEF76_RS18490
subclass of: SO_0000673
so part of: DEF76_RS18490
location: 3835..5223
location: region:3835-5223:1
so has part: feature:3835-5223:1:exon

WP_114914003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3835-5223:1:exon

DEF76_RS18495
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18495
so part of: sequence
location: 5314..6669
location: region:5314-6669:1
so has part: feature:5314-6669:1:exon
subclass of: SO_0000010

position:5314:1
position: 5314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6669:1
position: 6669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5314-6669:1:exon

DEF76_RS18495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008838406.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATSHDLKGLIRFLNREEWHTCFETVFDEHFAPVLKTADLAFEDLAEMFGDEMGNNLWGCAFEDFLTRNFDIAGHNIVDEYLRRRSWRESALSKAYMKGLRNAVMSLYEVSNIVPGKSLLARDLIRGGEPVFVSEESATGSLVQWDRVAARIVPVMGKNIFSGGLLLFTPQATETLFDGLRRVFGKKHTKKLPVIEDRELRVAAPMFTLSWLFATLEQVSNLPEMQNSDGDELVFHEIRFPLAEGATQQDIALRLKAAPGMAQENVTFWNWLEETPGDKQNPRPEASQAFETTMDSGACVLGNVVLEGRFLTLSVNSAQRAEQGTALIRDVLGDLVDAPSTTTHTVEEMMAKPSARSDRDGDFSIDPELATQIVHQQLDRHYREILDQPVGMLGDKTPRQKVKTPSGRQKVAEWLKYLENQSISRHDPFDPMATYDFGWLWRELGVLDLRR
SIO_010081: DEF76_RS18495
subclass of: SO_0000673
so part of: DEF76_RS18495
location: 5314..6669
location: region:5314-6669:1
so has part: feature:5314-6669:1:exon

WP_114914004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5314-6669:1:exon

DEF76_RS18500
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18500
so part of: sequence
location: complement(6727..7683)
location: region:6727-7683:-1
so has part: feature:6727-7683:-1:exon
subclass of: SO_0000010

position:6727:-1
position: 6727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7683:-1
position: 7683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6727-7683:-1:exon

DEF76_RS18500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018240679.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAISSSPPLPGRLIGYARVSTDDQGTTPQRDELRAAGCHDILEEHASGADRTRPVLARLLRDIRRGDTLVVVRLDRLARSVSHLLAVIDQLEAAGAHFRSLRDPIDTTTPQGMFSLQVLGAVAQLERSLIAERTKAGLRAARARGRIGGNPGLRARDPDAIRKLRARRDASHLDAVLAELDSWLPTVRRMRPHQPWGDVVRVLNRASGQNHHRPWTVERLRRTVQRLAAEGIVDDILLTRAPPQRGDDRLIRLVAGIKAAAPDATLQHIAAQLEAMHERTPRGGTRWHPSSVQNLLTRAKRSGLLMITPAERLTETSA
SIO_010081: DEF76_RS18500
subclass of: SO_0000673
so part of: DEF76_RS18500
location: complement(6727..7683)
location: region:6727-7683:-1
so has part: feature:6727-7683:-1:exon

WP_114914005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6727-7683:-1:exon

DEF76_RS18505
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18505
so part of: sequence
location: 8113..9237
location: region:8113-9237:1
so has part: feature:8113-9237:1:exon
subclass of: SO_0000010

position:8113:1
position: 8113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9237:1
position: 9237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8113-9237:1:exon

DEF76_RS18505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011930523.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVGDGLDRAPLDSLLRAEPPDPMALASALADAAAGIARLDQALAGHPLAQAFLYRVRLEAVRRMAAVDGQLIDPWHLAATIEGLRLRMDPYLRIIDRGEILERARAALTLHQWLVEPDFDQEGEVQRAVAMLAMQPASLPPLIAAAQGFREWIEMGETRPAMRAAMIRFWRQRQLLRLPVPLTGAAALRSDQSWDRDDWLPAFLRALAREAAVGLDLLYTMERGWFEARRGIASRRKDSHVAPAVDLLAAAPVLSATTLARILGIAVKNAIRILDELVAAEIAIEVTHRSKRRLFGLKGLAPLREVVRPPYRPDPNRGPGRPRQPSEAEEADIAPPPLPPLTPIERRAFDYTALEEAMAHLDAVVRRTRLALQA
SIO_010081: DEF76_RS18505
subclass of: SO_0000673
so part of: DEF76_RS18505
location: 8113..9237
location: region:8113-9237:1
so has part: feature:8113-9237:1:exon

WP_240319357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8113-9237:1:exon

DEF76_RS18510
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18510
so part of: sequence
location: 9396..9665
location: region:9396-9665:1
so has part: feature:9396-9665:1:exon
subclass of: SO_0000010

position:9396:1
position: 9396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9665:1
position: 9665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9396-9665:1:exon

DEF76_RS18510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011930522.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MPEPVQLSLFPERASLVRIRPERNEWRFYRLEILPDLFGYTLLARHWGRIGTKGRYRLDPHPNCGAALNALAALARRKRRRGYHDQAGR
SIO_010081: DEF76_RS18510
subclass of: SO_0000673
so part of: DEF76_RS18510
location: 9396..9665
location: region:9396-9665:1
so has part: feature:9396-9665:1:exon

WP_114914006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9396-9665:1:exon

DEF76_RS19570
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS19570
so part of: sequence
location: 10009..10152
location: region:10009-10152:1
so has part: feature:10009-10152:1:exon
subclass of: SO_0000010

position:10009:1
position: 10009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10152:1
position: 10152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10009-10152:1:exon

DEF76_RS19570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS19570
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRAFFAAAGIAGVKALHADARRVDPEAYARLREELGFSPATENTEGE
SIO_010081: DEF76_RS19570
subclass of: SO_0000673
so part of: DEF76_RS19570
location: 10009..10152
location: region:10009-10152:1
so has part: feature:10009-10152:1:exon

WP_162800767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10009-10152:1:exon

DEF76_RS18515
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18515
so part of: sequence
location: 10156..10509
location: region:10156-10509:1
so has part: feature:10156-10509:1:exon
subclass of: SO_0000010

position:10156:1
position: 10156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10509:1
position: 10509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10156-10509:1:exon

DEF76_RS18515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18515
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARATTSRTTTRSGKGAATRKGAAAKSPRGAAKTVRTPAPKPVPKAAAKPARASARASASAPLAGRIDQLERNIASLRTRYSELKRTMAALTARVEEQTPAPVAVPPETEQTADQNE
SIO_010081: DEF76_RS18515
subclass of: SO_0000673
so part of: DEF76_RS18515
location: 10156..10509
location: region:10156-10509:1
so has part: feature:10156-10509:1:exon

WP_114914007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10156-10509:1:exon

DEF76_RS18520
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18520
so part of: sequence
location: 10596..11270
location: region:10596-11270:1
so has part: feature:10596-11270:1:exon
subclass of: SO_0000010

position:10596:1
position: 10596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11270:1
position: 11270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10596-11270:1:exon

DEF76_RS18520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013639361.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SOS response-associated peptidase
translation: MCGRYANSLPPEAIARLFRTAGALPNVAPSWNVAPRQPAMVVRRHPEIGARHLDLLTWGLVPHWTKDLRAARRPISARAETVATSPMFRDAFARRRALIPAQAFYEWQRTENAPKQPYTIARRDGETLALAGLWEGWRSPEGEVLRSFAIIVTAANATMAPIHDRMPVIVEPPDWPLWLGETEGDVASLLRPAPEDTLRVWPVSTRVNRPANNDAELLAPLPAV
SIO_010081: DEF76_RS18520
subclass of: SO_0000673
so part of: DEF76_RS18520
location: 10596..11270
location: region:10596-11270:1
so has part: feature:10596-11270:1:exon

WP_114914008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10596-11270:1:exon

DEF76_RS18525
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18525
so part of: sequence
location: 11283..13484
location: region:11283-13484:1
so has part: feature:11283-13484:1:exon
subclass of: SO_0000010

position:11283:1
position: 11283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13484:1
position: 13484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11283-13484:1:exon

DEF76_RS18525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011930806.1
GO function: GO:0004386 - helicase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RecD-like DNA helicase
translation: MTEHQAPWPDGEVLAGIVERVTFHNAESGFAVLRVKARGHRDLVTIVGHAAAIAAGEWITATGEWVNDRTHGQQFKARFLKTSAPTTEEGIERYLASGMIRGIGPVYAKKLVRGFGEQVFDIIEGAPERLREVGGIGEVRAQRIVAAWAEQKVIREIMVFLHSHGVGTARAVRIFKTYGADAIQVMSENPYRLARDIRGIGFKTADAIAAKLGIEKTAMIRLRAGIGYALSEAMDEGHCGLPVVELIPLAERLLEVPEALIRTALDLELADGAVIADRVGAADCIFLAGLYHAERGIAERLRAIAHQPLPWPAIDTEKAIPWVEKRIGMTLAESQRQAVGLALAAKLLVITGGPGVGKTTIMRAILAILAAKGVRILLAAPTGRAAKRMSEATGFEAKTIHRLLEVDPNTGGFRRGPDHPLDCDLLVIDEASMVDVPLMHALTRAIPPPAALLVVGDVDQLPSVGPGQVLADLIGSGTVAVVRLAEIFRQAASSRIITSAHRINRGEMPDLTRAEAGSDFHFVAADEPETAVARIIDLVKTRIPRRFGLDPVRDIQVLCPMARGGVGARSLNIDLQAALNGEATPRVEKFGWTFAPGDKVMQIENDYDREVYNGDIGFVTAIDAEEAEITVRFDGRDVGYGLGDLDALVPAYAATIHKSQGSEYPAVVIPVLTQHYTMLQRNLLYTGITRGKRLVVLVGSRKAVAIAVRNVSGRRRWSKLREWLAAAVIPPAP
SIO_010081: DEF76_RS18525
subclass of: SO_0000673
so part of: DEF76_RS18525
location: 11283..13484
location: region:11283-13484:1
so has part: feature:11283-13484:1:exon

WP_114914009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11283-13484:1:exon

DEF76_RS18530
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18530
so part of: sequence
location: complement(13465..13644)
location: region:13465-13644:-1
so has part: feature:13465-13644:-1:exon
subclass of: SO_0000010

position:13465:-1
position: 13465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13644:-1
position: 13644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13465-13644:-1:exon

DEF76_RS18530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18530
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTIAGRFARLSEAALRETQSHIGYLEALLAAEMEEHESHAIARLLKEMEGHGVMAQEG
SIO_010081: DEF76_RS18530
subclass of: SO_0000673
so part of: DEF76_RS18530
location: complement(13465..13644)
location: region:13465-13644:-1
so has part: feature:13465-13644:-1:exon

WP_114914010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13465-13644:-1:exon

DEF76_RS18535
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18535
so part of: sequence
location: 13789..14949
location: region:13789-14949:1
so has part: feature:13789-14949:1:exon
subclass of: SO_0000010

position:13789:1
position: 13789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14949:1
position: 14949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13789-14949:1:exon

DEF76_RS18535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18535
EC number: 3.1.1.103
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008964806.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine hydrolase domain-containing protein
translation: MTARTDQISALLSRAIESSQVPGVAVAAVLPDGEIISAAAGVQDMATGVPMQPDSVVWIASMTKAITTAAAMQCVEQGRLALDAPIAAVLPALANPQVLEGFAADGTPRLRPARGAITLRHLLTHTSGFVYDMWNADIVRYLEKTGTPGITSCQNAALNLPLVFDPGSAWDYGIGIDWAGKAVEAVTGTTLGRYMQANIFEPLGMRDTGFRIRDALRPRLARVHARTPGGTEPIDFSLPQEPEFEMGGGGLYATVGDYLRFARMILGGGALDGVRVLAESTVAMMRANAMGTVRCRPMKSAVASATNDVDFMDGWQWGLSFAINPQRLSTGRSARSLTWAGLANSYYWIDPSKQVAGVYAAQILPFFDAPSVALFGDFEKAVYAMA
SIO_010081: DEF76_RS18535
subclass of: SO_0000673
so part of: DEF76_RS18535
location: 13789..14949
location: region:13789-14949:1
so has part: feature:13789-14949:1:exon

WP_114914011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13789-14949:1:exon

DEF76_RS18540
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18540
pseudo: true
so part of: sequence
location: <15037..>15159
location: region:15037-15159:1
so has part: feature:15037-15159:1:exon
subclass of: SO_0000010

position:15037:1
position: 15037
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:15159:1
position: 15159
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15037-15159:1:exon

DEF76_RS18540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007792467.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DEF76_RS18540
subclass of: SO_0000673
so part of: DEF76_RS18540
location: <15037..>15159
location: region:15037-15159:1
so has part: feature:15037-15159:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15037-15159:1:exon

DEF76_RS18545
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18545
so part of: sequence
location: 15349..15747
location: region:15349-15747:1
so has part: feature:15349-15747:1:exon
subclass of: SO_0000010

position:15349:1
position: 15349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15747:1
position: 15747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15349-15747:1:exon

DEF76_RS18545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011489125.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VOC family protein
translation: MTKPIHMMVRVFDLGKSLDFYRRAFGMEEVHRLDFDEFALVYLRHPESAFELELTWNKSRKEPYALGDGYGHIAFSVDDLAATHARLRASFPHVQDIKELKTKEGRTLARFFFTEDPDGYKIEVLQRGGHYQ
SIO_010081: DEF76_RS18545
subclass of: SO_0000673
so part of: DEF76_RS18545
location: 15349..15747
location: region:15349-15747:1
so has part: feature:15349-15747:1:exon

WP_114914044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15349-15747:1:exon

DEF76_RS18550
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18550
so part of: sequence
location: 15778..16359
location: region:15778-16359:1
so has part: feature:15778-16359:1:exon
subclass of: SO_0000010

position:15778:1
position: 15778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16359:1
position: 16359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15778-16359:1:exon

DEF76_RS18550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009771610.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tat (twin-arginine translocation) pathway signal sequence
translation: MPRKTDSSHEPIPLTRRGMLQGSSLLIGVLSAGSALAPFVPSRTWALELSALDDRQARIVMAFIKHLYPHPSLDDAVYALVVKAVDQKAAADKATRLIVLAGIDHLNAIGNGDWLGRDVALQEIDVRALEGTPFFSYLRVTSVNTLYNNPLAFKHFGYGGEAGDTGYLYTGFNDLKWLPDPPPSASGPIPKDD
SIO_010081: DEF76_RS18550
subclass of: SO_0000673
so part of: DEF76_RS18550
location: 15778..16359
location: region:15778-16359:1
so has part: feature:15778-16359:1:exon

WP_114914012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15778-16359:1:exon

DEF76_RS18555
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18555
so part of: sequence
location: 16392..17981
location: region:16392-17981:1
so has part: feature:16392-17981:1:exon
subclass of: SO_0000010

position:16392:1
position: 16392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17981:1
position: 17981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16392-17981:1:exon

DEF76_RS18555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011489123.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GMC family oxidoreductase
translation: MDQENTNKIQFEKNDDSVVVIIGSGAGGGTLANELAQQGIKVVLLEAGDWHTQTDFIADEWPSFTQLAWLDPRTTSGTWRVAKDFPTLPAWVCKTVGGTTVHWAGASLRIQPHEFQTRTVYGDIPGANLLDWPITRTDLDPFYDLAEKKMGVTRTNGIPGLPGNNNFKVLYNGASKLGYKEVSTGRMAINSEPRDGRTHCYQRGFCFQGCRTGAKWSTLYTEIPKALATGKCEVRAKAQVVRIEHDAQGKAAAVLYVDGEGNLQRQRARVVALAANSIETPRLLLLSASAMFPDGLANSSGQVGRNYMRHLTASVYATFPNRVEMFKGTTMAGIVGDEARLDPKRGFVGGYHMETISLGLPFYAAFLDPGAWGRAFTNALDQYANTAGMWIVGEDMPRETNRVTLNDTTKDQFGLAVPNVHYDDHPNDVAMRDHAFAQGTAVYQAAGAKDVYLVPPYPSTHNLGTCRMSDKSRDGVCNKFGQTHDVKNLFISDGSQFTTGAAENPTLTIVTLAIRQSRFIAEQMKQGAI
SIO_010081: DEF76_RS18555
subclass of: SO_0000673
so part of: DEF76_RS18555
location: 16392..17981
location: region:16392-17981:1
so has part: feature:16392-17981:1:exon

WP_114914045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16392-17981:1:exon

DEF76_RS18560
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18560
so part of: sequence
location: 18104..18454
location: region:18104-18454:1
so has part: feature:18104-18454:1:exon
subclass of: SO_0000010

position:18104:1
position: 18104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18454:1
position: 18454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18104-18454:1:exon

DEF76_RS18560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012403767.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MCKIYASSDPILYESRTRSVRIHGVVTTLRLENMFWQVIQEIANNEHMTTSHFIEKLYDELAEERGEITNFSSFLRVCCLIYMQNVKPFQNEATSQRAIGGIIADRGASASVLPLR
SIO_010081: DEF76_RS18560
subclass of: SO_0000673
so part of: DEF76_RS18560
location: 18104..18454
location: region:18104-18454:1
so has part: feature:18104-18454:1:exon

WP_114914013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18104-18454:1:exon

DEF76_RS18565
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18565
pseudo: true
so part of: sequence
location: complement(18887..>19309)
location: region:18887-19309:-1
so has part: feature:18887-19309:-1:exon
subclass of: SO_0000010

position:18887:-1
position: 18887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19309:-1
position: 19309
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18887-19309:-1:exon

DEF76_RS18565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013634949.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DEF76_RS18565
subclass of: SO_0000673
so part of: DEF76_RS18565
location: complement(18887..>19309)
location: region:18887-19309:-1
so has part: feature:18887-19309:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18887-19309:-1:exon

DEF76_RS18575
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18575
so part of: sequence
location: 19732..21114
location: region:19732-21114:1
so has part: feature:19732-21114:1:exon
subclass of: SO_0000010

position:19732:1
position: 19732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21114:1
position: 21114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19732-21114:1:exon

DEF76_RS18575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006746220.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MANQIPEEALAAIEEVVRRNPNGVSAPEILRALAAPIPPRTLQYRLKHLVTRNRIVMDGEGRWARYRMPDTAINAVAREDTKEPIIPLSEVGTAIRDYVRQAPEARKPVGYDRKFLDRYRPNVSFYLTPQDRAHLATVGRPQIAEQPAGTYAKLILSRLLIDLSWNSSRLEGNTYSLLDTKRLIELGEEAVGRVHLEAQMILNHKDAIEFLVGAADDIGFNRYTLLNLHALLANNLLADPSAAGRLRYIAIGIERSAFHPLEVPQLIEESFDQILATAAAISDPFEQAFFVMVQLPYLQPFDDVNKRVSRLAANIPLIKHNLSPLSFIDVPRQTYTEAVLGVYELNKIDLLKDVFIWAYERSAARYAAVRQSLGEPDPFRLRYREQLRELIAELVRARVGRKDAVARIAAWSKKEIDPGDHKRFAEIAEGELIGLHEGNFARYRIRPSEFAAWRQVWESR
SIO_010081: DEF76_RS18575
subclass of: SO_0000673
so part of: DEF76_RS18575
location: 19732..21114
location: region:19732-21114:1
so has part: feature:19732-21114:1:exon

WP_114914014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19732-21114:1:exon

DEF76_RS18580
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18580
pseudo: true
so part of: sequence
location: complement(21157..>21351)
location: region:21157-21351:-1
so has part: feature:21157-21351:-1:exon
subclass of: SO_0000010

position:21157:-1
position: 21157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21351:-1
position: 21351
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21157-21351:-1:exon

DEF76_RS18580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018000578.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 6-chlorohydroxyquinol-1,2-dioxygenase
SIO_010081: DEF76_RS18580
subclass of: SO_0000673
so part of: DEF76_RS18580
location: complement(21157..>21351)
location: region:21157-21351:-1
so has part: feature:21157-21351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21157-21351:-1:exon

DEF76_RS19575
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS19575
so part of: sequence
location: 21482..21640
location: region:21482-21640:1
so has part: feature:21482-21640:1:exon
subclass of: SO_0000010

position:21482:1
position: 21482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21640:1
position: 21640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21482-21640:1:exon

DEF76_RS19575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS19575
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MELRRITGALALPHGPGPLRPLLVAVSWIHLGKGTVFGLGQMLIALRDETGA
SIO_010081: DEF76_RS19575
subclass of: SO_0000673
so part of: DEF76_RS19575
location: 21482..21640
location: region:21482-21640:1
so has part: feature:21482-21640:1:exon

WP_162800768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21482-21640:1:exon

DEF76_RS18585
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18585
so part of: sequence
location: complement(21654..21998)
location: region:21654-21998:-1
so has part: feature:21654-21998:-1:exon
subclass of: SO_0000010

position:21654:-1
position: 21654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21998:-1
position: 21998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21654-21998:-1:exon

DEF76_RS18585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18585
inference: COORDINATES: protein motif:HMM:NF024850.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVARTPQNWPNMLHASAYAVTLHYLKAVAALGMARAKASGRGVVAQMKAMPTDDDAFGAGAIRADGRGLFPAYLFEVKPLAARQQPWDLYTLRAETPAAQAVHPLGFDGCPLGR
SIO_010081: DEF76_RS18585
subclass of: SO_0000673
so part of: DEF76_RS18585
location: complement(21654..21998)
location: region:21654-21998:-1
so has part: feature:21654-21998:-1:exon

WP_240319362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21654-21998:-1:exon

DEF76_RS20085
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS20085
so part of: sequence
location: 21964..22122
location: region:21964-22122:1
so has part: feature:21964-22122:1:exon
subclass of: SO_0000010

position:21964:1
position: 21964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22122:1
position: 22122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21964-22122:1:exon

DEF76_RS20085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS20085
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFGQFCGVRATILRANRRVRADSDEVGHAFQLEAGHCFRTEAGRGSDLKPAT
SIO_010081: DEF76_RS20085
subclass of: SO_0000673
so part of: DEF76_RS20085
location: 21964..22122
location: region:21964-22122:1
so has part: feature:21964-22122:1:exon

WP_240319364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21964-22122:1:exon

DEF76_RS18590
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
gene: istB
locus tag: DEF76_RS18590
so part of: sequence
location: complement(22172..22924)
location: region:22172-22924:-1
so has part: feature:22172-22924:-1:exon
subclass of: SO_0000010

position:22172:-1
position: 22172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22924:-1
position: 22924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22172-22924:-1:exon

DEF76_RS18590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
gene: istB
locus tag: DEF76_RS18590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011930855.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MLTHPTLDLLLKLGLHGMAKAFKDLDARPEVAGLAHAEWLALLLEHEATLRQQKRFESRARAAKLRQSASVEDVDYRAPRGLDRAQFLKLASCDWVRARHNLLITGPCGVGKSWLACALGQKACREDLSTAYHRVPRLFSALALARADGRYARTLRQIARLDLLILDDWGPETLNADQRRDLLEIIDDRHEMRSVIITSQVPVERWYEIIGDPTIADAILDRLVHNAYRIELTGESLRKKRDPAPAHART
SIO_010081: DEF76_RS18590
subclass of: SO_0000673
so part of: DEF76_RS18590
location: complement(22172..22924)
location: region:22172-22924:-1
so has part: feature:22172-22924:-1:exon

WP_114910999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22172-22924:-1:exon

DEF76_RS18595
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
gene: istA
locus tag: DEF76_RS18595
so part of: sequence
location: complement(22946..24487)
location: region:22946-24487:-1
so has part: feature:22946-24487:-1:exon
subclass of: SO_0000010

position:22946:-1
position: 22946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24487:-1
position: 24487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22946-24487:-1:exon

DEF76_RS18595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
gene: istA
locus tag: DEF76_RS18595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003601684.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MPAKRELTMRQIRQTLRLASDGISARAMGRMLGVARSTIQDNLKRAQAAGLAWPLPADLSDAVLEERLFARSGAPRGVRRRAEPVWSELVCEFKRPGVNLMVLWEEYRAGHPEGYSYSRFCDLFREFEARLSPVMRQEHRAGDKVFVDYSGKKLGITDPATGIVRMAEIFVAVLGASNYTYAEASWTQTLPDWIGAHSRMFRFFGGVPRLIVPDNLKSGVNKASFYDPEINLSYGRMASHYGVGVLPARPRRPKDKAKVEAGVRFAQSYILGRLRQQTFFSLAEANQAIAGMVERINAHVMRRLGVSRRHLFETIERQALAALPETDHEFAEWGFARVSLDYHVEVCGFFYSVPHQLIRQQVDTRATERMVEIFHQGKRVAVHQRRYGGPRHGTAPEHMPSAHRRYAAWTPERFRSWGASIGPQTEGLIIAILANRPHPEQGFRTCLGILRLFKELDRPRAEAVAARAVAFGAFNYKSIASIIASKLDQTASPPDEAQAVLTHGNLRGAEYFH
SIO_010081: DEF76_RS18595
subclass of: SO_0000673
so part of: DEF76_RS18595
location: complement(22946..24487)
location: region:22946-24487:-1
so has part: feature:22946-24487:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22946-24487:-1:exon

DEF76_RS18600
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18600
so part of: sequence
location: complement(24580..25539)
location: region:24580-25539:-1
so has part: feature:24580-25539:-1:exon
subclass of: SO_0000010

position:24580:-1
position: 24580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25539:-1
position: 25539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24580-25539:-1:exon

DEF76_RS18600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18600
inference: COORDINATES: protein motif:HMM:NF024850.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MEVPRRLVVTGLGAGLGGLGFSRRSARAAGKPVRIGVLTDLSGPYRDTSGPTSVACVRQAVADFASAGGGLNVEVLAADHQNKADIGAGIARGWIDTEGVDAIADVPNSSVALAVAEIVREKDKVLLEASATTVALTGAQCSPNTVLWSLDTYLLGQSTGGAMVKSGGDTWFFITADYTFGHSLEEQTARVVAASGGKVLGRSRYPFPATSDFSAYMAAARASGAKVLGLANAGADLVNSIKEAHEFGLTRVGMRIAPLEMFLTDAHALEPAESAGLVCSATFYWDLNDRTLQIPTEAGRGFRFDVGQRSDLKPATIPI
SIO_010081: DEF76_RS18600
subclass of: SO_0000673
so part of: DEF76_RS18600
location: complement(24580..25539)
location: region:24580-25539:-1
so has part: feature:24580-25539:-1:exon

WP_114914016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24580-25539:-1:exon

DEF76_RS18605
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18605
so part of: sequence
location: 26487..27365
location: region:26487-27365:1
so has part: feature:26487-27365:1:exon
subclass of: SO_0000010

position:26487:1
position: 26487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27365:1
position: 27365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26487-27365:1:exon

DEF76_RS18605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18605
EC number: 1.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015341053.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent oxidoreductase
translation: MKLGFIGLGQMGTGMAANLLKAGHEVVAYNRTAAKAAALERLGARRAATPAEACQGDAVVTMLADDDALEEIVFGAHGILAALAKGALHISASTISVALSRKLAAAHETSGQCYVAAPVFGRPDAAAAAQLFVVAAGPRDAIAHAEPIFQAIGKKSFILGEPAESANLVKLSGNFLIASVIEALGEAMALVAKGGVDQRQYLEILTSTLFSAPVYKTYGELIAERKYQPPGFIAPLGLKDIHLALSAAGELRVPMPLASLLRDRFLTLLANGGEGLDWSAIGQLAARDAGEI
SIO_010081: DEF76_RS18605
subclass of: SO_0000673
so part of: DEF76_RS18605
location: 26487..27365
location: region:26487-27365:1
so has part: feature:26487-27365:1:exon

WP_114914046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26487-27365:1:exon

DEF76_RS18610
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18610
pseudo: true
so part of: sequence
location: complement(27375..>27551)
location: region:27375-27551:-1
so has part: feature:27375-27551:-1:exon
subclass of: SO_0000010

position:27375:-1
position: 27375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27551:-1
position: 27551
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27375-27551:-1:exon

DEF76_RS18610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611877.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DEF76_RS18610
subclass of: SO_0000673
so part of: DEF76_RS18610
location: complement(27375..>27551)
location: region:27375-27551:-1
so has part: feature:27375-27551:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27375-27551:-1:exon

DEF76_RS18615
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18615
so part of: sequence
location: complement(27570..27824)
location: region:27570-27824:-1
so has part: feature:27570-27824:-1:exon
subclass of: SO_0000010

position:27570:-1
position: 27570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27824:-1
position: 27824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27570-27824:-1:exon

DEF76_RS18615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18615
inference: COORDINATES: protein motif:HMM:NF025063.2
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase core domain-containing protein
translation: MLEEFWATVDPRAPDTADRLAEWVHHYNWHRPHEALGGLSPIDRICERIPKTPIRAEVEDSYDPAKERVQIREHALDIALQSLK
SIO_010081: DEF76_RS18615
subclass of: SO_0000673
so part of: DEF76_RS18615
location: complement(27570..27824)
location: region:27570-27824:-1
so has part: feature:27570-27824:-1:exon

WP_240319360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27570-27824:-1:exon

DEF76_RS18620
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18620
pseudo: true
so part of: sequence
location: complement(<27862..28167)
location: region:27862-28167:-1
so has part: feature:27862-28167:-1:exon
subclass of: SO_0000010

position:27862:-1
position: 27862
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:28167:-1
position: 28167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27862-28167:-1:exon

DEF76_RS18620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032490240.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: DEF76_RS18620
subclass of: SO_0000673
so part of: DEF76_RS18620
location: complement(<27862..28167)
location: region:27862-28167:-1
so has part: feature:27862-28167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27862-28167:-1:exon

DEF76_RS20255
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS20255
so part of: sequence
location: 28470..28592
location: region:28470-28592:1
so has part: feature:28470-28592:1:exon
subclass of: SO_0000010

position:28470:1
position: 28470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28592:1
position: 28592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28470-28592:1:exon

DEF76_RS20255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS20255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSLVNRYLAEHNAKPKPFVWKASAASILAKLNRLSASSE
SIO_010081: DEF76_RS20255
subclass of: SO_0000673
so part of: DEF76_RS20255
location: 28470..28592
location: region:28470-28592:1
so has part: feature:28470-28592:1:exon

WP_274966835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28470-28592:1:exon

DEF76_RS18625
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18625
so part of: sequence
location: 28702..28974
location: region:28702-28974:1
so has part: feature:28702-28974:1:exon
subclass of: SO_0000010

position:28702:1
position: 28702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28974:1
position: 28974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28702-28974:1:exon

DEF76_RS18625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019564015.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CopG family ribbon-helix-helix protein
translation: MITSIKLDDNLASRIRRLAELRRRSAHWIMREAIRDYVVREEARESFRQEALASWSAFQDTGRHLTGEEVQAWLTSWGSDAEAEPPECHE
SIO_010081: DEF76_RS18625
subclass of: SO_0000673
so part of: DEF76_RS18625
location: 28702..28974
location: region:28702-28974:1
so has part: feature:28702-28974:1:exon

WP_114914018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28702-28974:1:exon

DEF76_RS18630
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18630
so part of: sequence
location: 28962..29255
location: region:28962-29255:1
so has part: feature:28962-29255:1:exon
subclass of: SO_0000010

position:28962:1
position: 28962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29255:1
position: 29255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28962-29255:1:exon

DEF76_RS18630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018990404.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MPRIIVTEGGVRDLERCRHYLRQRSLEAARRAARVIAQRFSQLAIHPALGRPVPDTPELRELIIPFGDAGYVVLYRHEPVDDAVYILAVRHQREAGY
SIO_010081: DEF76_RS18630
subclass of: SO_0000673
so part of: DEF76_RS18630
location: 28962..29255
location: region:28962-29255:1
so has part: feature:28962-29255:1:exon

WP_114914019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28962-29255:1:exon

DEF76_RS18640
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18640
so part of: sequence
location: 29589..30188
location: region:29589-30188:1
so has part: feature:29589-30188:1:exon
subclass of: SO_0000010

position:29589:1
position: 29589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30188:1
position: 30188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29589-30188:1:exon

DEF76_RS18640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18640
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAPDFDQEREVQSAEALLAVQLWTPVFLRALAREAEAGLDLLLALEWAWFAACRAVASRRKSSHAVAVIELLAATKVVSATTLAARLGIAVKNAIRLLDQLVVADIAVEVTHRSRRRPFGLKGLAPLREAGPPVVSSGTGARARAAAPDGQCRRGRSAAGAGPPQAPPRLSRPGRTVTSDERGRETLAAPGETPGGHRI
SIO_010081: DEF76_RS18640
subclass of: SO_0000673
so part of: DEF76_RS18640
location: 29589..30188
location: region:29589-30188:1
so has part: feature:29589-30188:1:exon

WP_114914021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29589-30188:1:exon

DEF76_RS18645
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18645
so part of: sequence
location: 30499..32523
location: region:30499-32523:1
so has part: feature:30499-32523:1:exon
subclass of: SO_0000010

position:30499:1
position: 30499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32523:1
position: 32523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30499-32523:1:exon

DEF76_RS18645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012606161.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-54-dependent Fis family transcriptional regulator
translation: MHRQPMIRLAWEKFLANGQLSPGQFLSQTIATSWARSRRAGVNTRQREAPYASEAEVFRLRTQNADLLTAARPAVERSDLFLAEAKSMMVLADTSGFIIETAGDPHVIEDGRRNHLEIGGRWEEDVIGTNAIGTALASIKPVQILGVEHFCEDVQRWVCAASPVRHPIDGQLLGVVDISGPASAFNPQSLALAVALGQEIEASLGRAAKLEHEVLLRHFVSKRSLWLSEDILVVDRRGVVVHATQKARHRMDAQASNTLSQELRQMIGVSLSQSWESNCRRRFPNASLEIVKNNDTDVGCLIVLHQTRSRTTTMARTQSYTEISVGFEQILGESAPIREACERARKLAPNTLPILIEGETGVGKELFARAIKGASPSAKGPFVPMNCGGMARDLIASELFGYAKGAFTGADENGYVGKIEKADGGVLCLDEIGEMPLDLQSYLLRVLEDGVVYRIGDHKARQVNIRILSMTNRDLLAEVEAGRFRRDLYYRIAAARLRIPPLRERHNDLLLLAEHFAAATAARLGRPTPTFNVDALILLRSYHWPGNVRELRNVIDAMVTLNESGRLGVDDLPPEIVAASRVRPQPSASLAGVLPDAGNLKSAERSTILAQLHECRGNVTETARRLGIARSTLYVRLAEYGISYSRTPRRIVRRLGGQAFERPDDGHLRAQHSD
SIO_010081: DEF76_RS18645
subclass of: SO_0000673
so part of: DEF76_RS18645
location: 30499..32523
location: region:30499-32523:1
so has part: feature:30499-32523:1:exon

WP_114914022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30499-32523:1:exon

DEF76_RS18650
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18650
so part of: sequence
location: 32618..34798
location: region:32618-34798:1
so has part: feature:32618-34798:1:exon
subclass of: SO_0000010

position:32618:1
position: 32618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34798:1
position: 34798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32618-34798:1:exon

DEF76_RS18650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012115484.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydantoinase/oxoprolinase family protein
translation: MPAAIRRKAVDTHIPNARNVQVLGIDAGGTMTDTFFVDVNGEFVVGKAQSTPQNESIGLIASSEDGLGNWGLPLTDALKQLQTGVYSGTAMLNRVVQRKGLKCGLIVNRGMEDFHRMGRAVQSHLGYAYEDRIHLNTHRYDPPLVPRNLTRGVVERIDMAGRVVIPLREESARTAARELISADVEGIVISLLHSYKNADHERRVRDIVLEEVAHSGKSIPVFASVDYYPVRKESHRTNTTILEGYAAEPSRQTLKKISDAFKEHGTKFDLRVMATHGGTIAWTAKELARTIVSGPIGGVIGAKYLGEVLGYHNIACSDIGGTSFDVALITQGELTIKNDPDMARLVLSLPLVAMDSVGAGAGSFIRVDPYTNAIKLGPDSAGYRVGVCWKDGGIATATVSDCHMVLGYLNPDNFLGGALKLDRQRSVDAIKTQIADPLGLSVEDAAAGVIELLDADLRNYLRAMISGKGYSPQSFVCFSYGGAGPVHAYGYTEGLGFEDVIVPAWAAGFSAFGCAAADFEYRYDKSLDINLAPDATTGQREQAAKTLQAAWTELTRNVLEEFKLNGYAADRVTLQPGYRMQYRGQLNDLEIESPLPSAETAEDWEKLVGAFNATYGRVYAASARSPELGYSVTGAIMRGTVSIPKPKIPKEPLEDETPPNEAFLGTRKFYRKKCWVDARLYKMEALRPGNRVAGPAIIESDATTFVVPDGFETFLDGHRLFHLKEV
SIO_010081: DEF76_RS18650
subclass of: SO_0000673
so part of: DEF76_RS18650
location: 32618..34798
location: region:32618-34798:1
so has part: feature:32618-34798:1:exon

WP_114914047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32618-34798:1:exon

DEF76_RS18655
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18655
so part of: sequence
location: 34841..37174
location: region:34841-37174:1
so has part: feature:34841-37174:1:exon
subclass of: SO_0000010

position:34841:1
position: 34841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37174:1
position: 37174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34841-37174:1:exon

DEF76_RS18655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010394645.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydantoinase B/oxoprolinase family protein
translation: MNIDVRINAHDAETRGIVRGGETLKQHRDRLMEATKRTRHYAGLEKMELRDGHPILYNKLFSRLRAGVVNARETAKKIAASPIVEQEGELCFTLYNAAGDSILTSTGIIIHVGTMGAAIKYMIENDWESNPGVRDKDIFCNNDCLIGNVHPCDIHTIVPIFWEGELIGWVGGVTHVIDTGAVGPGSMATGQVQRFGDGYSITCRKVGENDTLFRDWLHESQRMVRTTRYWMLDERTRIAGCHMIRKLVEDVVADEGIEAYWKFAYEAVEHGRLGLKNRIKAMTIPGTYRQVGFVDVPYSHEDVRVPSDFAKLDTIMHSPCEMTIRGDGSWRLDFEGASRWGWHTYNAHQVSFTSGIWVMMTQTLIPSEMINDGAAYGTEFRLPKGTWMNPDDRRVAFSYSWHFLVSAWTALWRGLSRSYFGRGYLEEVNAGNANTSNWLQGGGFNQYDEIHAVNSFECAANGTGATAVSDGLSHAAAIWNPEGDMGDMEIWELAEPLIYLGRQIKASSGGAGKYRGGCGFESLRMVWNAKDWTMFFMGNGHISSDWGLMGGYPAASGYRFAAHKTELKKLIAEGKPLPLGGDTDPENPTWDGLLVDATIKRDKQAITTEEMFADYDLYLNYMRGGPGFGDPLDREPQRVVDDLNSGYLLERFAERVYGVVAGKGADGAWVVDEGATATKRKAIRKERIATSVPTRDWLKRERAKVLGKEGADDHVKQMFAASFKLSPKFLSDFKTFWDLPADWSLTEDELDIPHYGSHYSMDVSELPDVKTVQFVEE
SIO_010081: DEF76_RS18655
subclass of: SO_0000673
so part of: DEF76_RS18655
location: 34841..37174
location: region:34841-37174:1
so has part: feature:34841-37174:1:exon

WP_114914023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34841-37174:1:exon

DEF76_RS18660
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18660
so part of: sequence
location: 37232..37741
location: region:37232-37741:1
so has part: feature:37232-37741:1:exon
subclass of: SO_0000010

position:37232:1
position: 37232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37741:1
position: 37741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37232-37741:1:exon

DEF76_RS18660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012115486.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetone carboxylase subunit gamma
translation: MTYTRAKISDLVDGTIDHDTLHQMLSTPKDPERFVTYLGILQERASWDDRIILPLAPKLFIVQIKTTKQWKVRCDCGHDFCDWRDNWKLHARIHVRDTAAKMEEIYPRLMAPTSTWQVLREYYCPECGTMHDVEAPTPWYPVIHDFEPDIDTFYREWLGIPVPERADAV
SIO_010081: DEF76_RS18660
subclass of: SO_0000673
so part of: DEF76_RS18660
location: 37232..37741
location: region:37232-37741:1
so has part: feature:37232-37741:1:exon

WP_114914024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37232-37741:1:exon

DEF76_RS18665
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18665
so part of: sequence
location: complement(38044..38634)
location: region:38044-38634:-1
so has part: feature:38044-38634:-1:exon
subclass of: SO_0000010

position:38044:-1
position: 38044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38634:-1
position: 38634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38044-38634:-1:exon

DEF76_RS18665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18665
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: transposase
translation: MTIPTVRTIVWHCAASLPDDTEELKFDYVIRFRGNITVTAERYQVGTVLCVQDKTMKQAWCLAASDGAASAASLKALYGKRWSIECGLRDTKDLRFGMGMGSIHVSTRARRDRLWLIAAFAVMLLTPLGAAGEALGYDRFLKSNTAKRRTHSLFRQGCMLYELLPTMPEPRLLPLVQKFADMLADLPVFAKTFGAV
SIO_010081: DEF76_RS18665
subclass of: SO_0000673
so part of: DEF76_RS18665
location: complement(38044..38634)
location: region:38044-38634:-1
so has part: feature:38044-38634:-1:exon

WP_162800770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38044-38634:-1:exon

DEF76_RS18670
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
gene: panB
locus tag: DEF76_RS18670
so part of: sequence
location: complement(38642..39475)
location: region:38642-39475:-1
so has part: feature:38642-39475:-1:exon
subclass of: SO_0000010

position:38642:-1
position: 38642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39475:-1
position: 39475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38642-39475:-1:exon

DEF76_RS18670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
gene: panB
locus tag: DEF76_RS18670
EC number: 2.1.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009451434.1
GO function: GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO process: GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-methyl-2-oxobutanoate hydroxymethyltransferase
translation: MSVTGKSKALTVPDIAARKSGIPLTCLTAYTTPVAKLVDPHCDIVLVGDSVGMVLHGLPSTLTVTLEMMILHGKAVRRGLQRALMVVDMPFGSYEESPEQAFRNAACLMAETGCAAVKLEGGENMASTIRFLTARGIPVMAHLGLTPQAINVFGGYRVQGRSEGAARVRNDALMVADAGAFAIVLEKIPEALARQITEDVAIPTIGIGASAACDGQILVVDDMLGLFGDFRPKFVKRYAELGQTAEAAVKVYAQEVRERRFPGSDHVFNDTPALSKE
SIO_010081: DEF76_RS18670
subclass of: SO_0000673
so part of: DEF76_RS18670
location: complement(38642..39475)
location: region:38642-39475:-1
so has part: feature:38642-39475:-1:exon

WP_114914026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38642-39475:-1:exon

DEF76_RS18675
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18675
so part of: sequence
location: 39887..40819
location: region:39887-40819:1
so has part: feature:39887-40819:1:exon
subclass of: SO_0000010

position:39887:1
position: 39887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40819:1
position: 40819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39887-40819:1:exon

DEF76_RS18675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006206219.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYDGAEAMMLSNDGESVRVELIAVVIAVSDFIPRVLTLEGGTVLPAGPFESRHRSLQGGLRIWVEQQTGHPLGYVEQLYTFADRNRSTAKRTISISYLALTRESRPLASATWQDWYDYFPWENQCSPAGRAAAADIAARLRQWAGDDTAREAQVSVCFGSSGLPWNEELVLARYELLYEAGLVAEATRGHGFIPSPVAPGVPMEVDHRRILATAASRLRAKIKYRPVIFELMPESFTLFELQRTVEAIAGQPLHKPNFRRMVESQNLVEETGAMVGSGLRGRPAKLYRFREALRSERASVGTRLPVVRA
SIO_010081: DEF76_RS18675
subclass of: SO_0000673
so part of: DEF76_RS18675
location: 39887..40819
location: region:39887-40819:1
so has part: feature:39887-40819:1:exon

WP_240319355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39887-40819:1:exon

DEF76_RS18680
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
gene: nadA
locus tag: DEF76_RS18680
so part of: sequence
location: 40925..41923
location: region:40925-41923:1
so has part: feature:40925-41923:1:exon
subclass of: SO_0000010

position:40925:1
position: 40925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41923:1
position: 41923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40925-41923:1:exon

DEF76_RS18680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
gene: nadA
locus tag: DEF76_RS18680
EC number: 2.5.1.72
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013762087.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO process: GO:0009435 - NAD biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: quinolinate synthase NadA
translation: MNDAPTTAVALAASKARLASYLHPAEWALIAEDIAAIHDLKRDRRALVLAHNYQTPDIFHGVADVVGDSLALARAAERFSVDVLVVAGVHFMAETAKLLNPDRRVLTPDQEAGCSLAASIGPDDVVALKARYPGLPVVAYVNTSAAVKALADYCCTSANAARVVEAAARDFGSEAVIMLPDRFLAANTARETRIKIIPWAGACEVHERFGPAELTELRERFPGITLLAHPECPEPVVAAADFAGSTAAMAAFLDKHHPSRVALITECGMSDNLAAAHPETEFIRTCNLCPHMKRITLGKIRRALETLSPEVKLDPALITAASRPLQRMLAIG
SIO_010081: DEF76_RS18680
subclass of: SO_0000673
so part of: DEF76_RS18680
location: 40925..41923
location: region:40925-41923:1
so has part: feature:40925-41923:1:exon

WP_114914027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40925-41923:1:exon

DEF76_RS18685
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18685
so part of: sequence
location: 41920..43437
location: region:41920-43437:1
so has part: feature:41920-43437:1:exon
subclass of: SO_0000010

position:41920:1
position: 41920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43437:1
position: 43437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41920-43437:1:exon

DEF76_RS18685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18685
inference: COORDINATES: protein motif:HMM:NF013086.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-binding protein
translation: MRFPSNQPVIVGSGLAALAAALAAAPRPVLLVTAHRLGEGAASGAAQGGIAAATSPDDGPDRHLADTLAVGDGLNDVDVAAHLIARGPAVIDALESWGVNFDRAANGDFALGREAGHSLPRIHHVADHTGAAIMAALTARLRAASHVTCLEETEATALVPHKGRIDGLWLAHGGESFFLACPAILLATGGAAGLFGTRSAPSSAAGCGLALAARAGAQLRDLEFVQFHPTALAADASPLPLLTEALRGAGALVIDERCNAFIDPLAPRDELARAIACHQEAGHRVFLDARPLGPKLAARFPRFCATASAFGLDPTRAPVPIRPAAHYHMGGIQTDAGGQTSITGLFAAGEAAASGLHGANRLASNSLLEAAAMGLLIGARWRESVFQSLQCPAPRTSPLPMPAGRAPVPLAVLMDEAMGIWRDGATLRTALASLAPAIGADDAALAAFLMMYAAHERRESRGAHSRSDFPEHAALARSQIFTLGEAAERTASILGAPILPTSRSL
SIO_010081: DEF76_RS18685
subclass of: SO_0000673
so part of: DEF76_RS18685
location: 41920..43437
location: region:41920-43437:1
so has part: feature:41920-43437:1:exon

WP_114914028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41920-43437:1:exon

DEF76_RS18690
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
gene: nadC
locus tag: DEF76_RS18690
so part of: sequence
location: 43452..44306
location: region:43452-44306:1
so has part: feature:43452-44306:1:exon
subclass of: SO_0000010

position:43452:1
position: 43452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44306:1
position: 44306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43452-44306:1:exon

DEF76_RS18690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
gene: nadC
locus tag: DEF76_RS18690
EC number: 2.4.2.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655339.1
GO function: GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO process: GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxylating nicotinate-nucleotide diphosphorylase
translation: MPQASAPPPYFLIRNVVAAALAEDLGEAGDITSAAIVPVSHRLRAFLIAREEGIVAGLACVEAAFTALDPATRIDITIGDGGRVSAGDVIATIEGSAHAILGAERIALNFLCHLSGIASLAHTIVTAIAHTRAHLVCTRKTLPGLRALQKYAVRVGGAHNHRFGLGDAVLIKDNHVAIAGSVTEAIQRARAGVGHMVKIECEVETLAELDEALTVGVDAVLLDNMSPPHLREAVQLIRGRALSEASGRITPKTAPEIAETGVDLISAGWITHSPQALDIGLDVV
SIO_010081: DEF76_RS18690
subclass of: SO_0000673
so part of: DEF76_RS18690
location: 43452..44306
location: region:43452-44306:1
so has part: feature:43452-44306:1:exon

WP_114914049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43452-44306:1:exon

DEF76_RS18695
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18695
pseudo: true
so part of: sequence
location: complement(44390..>44623)
location: region:44390-44623:-1
so has part: feature:44390-44623:-1:exon
subclass of: SO_0000010

position:44390:-1
position: 44390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44623:-1
position: 44623
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44390-44623:-1:exon

DEF76_RS18695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013641226.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: DEF76_RS18695
subclass of: SO_0000673
so part of: DEF76_RS18695
location: complement(44390..>44623)
location: region:44390-44623:-1
so has part: feature:44390-44623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44390-44623:-1:exon

DEF76_RS18700
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18700
pseudo: true
so part of: sequence
location: <44598..44765
location: region:44598-44765:1
so has part: feature:44598-44765:1:exon
subclass of: SO_0000010

position:44598:1
position: 44598
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:44765:1
position: 44765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44598-44765:1:exon

DEF76_RS18700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013639145.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: DEF76_RS18700
subclass of: SO_0000673
so part of: DEF76_RS18700
location: <44598..44765
location: region:44598-44765:1
so has part: feature:44598-44765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44598-44765:1:exon

DEF76_RS18705
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
gene: istB
locus tag: DEF76_RS18705
so part of: sequence
location: complement(45166..45867)
location: region:45166-45867:-1
so has part: feature:45166-45867:-1:exon
subclass of: SO_0000010

position:45166:-1
position: 45166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45867:-1
position: 45867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45166-45867:-1:exon

DEF76_RS18705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
gene: istB
locus tag: DEF76_RS18705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330531.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MSELKLYGMRASFDEIAGKGLVRRDEIYPLIASLIRAERTHRQARSISYRISGAKFPVLKDLDSFVFADTPVDQGQVRELTTGTFLDAKRNTIFIGGTGTGKTHLCIAVAAAVIRSRARGRFFNLVDLVNQLEQEKAAGKSGRLAEKLLRHDLVVIDELGYLPFSQSGGQLLFHLISKLYENTSLLITTNLAFADWPQVFGDVKMTTAMLDRLTHHCDIVETGNTSWRFKNRN
SIO_010081: DEF76_RS18705
subclass of: SO_0000673
so part of: DEF76_RS18705
location: complement(45166..45867)
location: region:45166-45867:-1
so has part: feature:45166-45867:-1:exon

WP_275895699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45166-45867:-1:exon

DEF76_RS18710
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
gene: istA
locus tag: DEF76_RS18710
pseudo: true
so part of: sequence
location: complement(45794..47393)
location: region:45794-47393:-1
so has part: feature:45794-47393:-1:exon
subclass of: SO_0000010

position:45794:-1
position: 45794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47393:-1
position: 47393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45794-47393:-1:exon

DEF76_RS18710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
gene: istA
locus tag: DEF76_RS18710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611638.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: DEF76_RS18710
subclass of: SO_0000673
so part of: DEF76_RS18710
location: complement(45794..47393)
location: region:45794-47393:-1
so has part: feature:45794-47393:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45794-47393:-1:exon

DEF76_RS18715
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18715
so part of: sequence
location: 47595..48824
location: region:47595-48824:1
so has part: feature:47595-48824:1:exon
subclass of: SO_0000010

position:47595:1
position: 47595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48824:1
position: 48824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47595-48824:1:exon

DEF76_RS18715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18715
inference: COORDINATES: protein motif:HMM:NF024991.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTLDDEQVEAVRHVLDEGSLKILEGRAGTGKSHTLSAVRQAAERDGYEVIGLAPTNAVAQDLRDSGFRRATTLQSLLWYREHAPQHANAQVPGKSLVIVDEAAMLSTEHLDRLTRLAVETGAKLVLVGDDRQLASIERGGVFSDIRERIGSATLSAVRRQHQDWARQAARDFAEGRFREGLEAYEAHGLIHWQEDLEEARATLLERWSADTETSRGKRFVFAYTNEEVRRLNDALQAIEITRGRVRDCITLETERGTLSVGVGDRIAFRGTWKPKGIYAGALATVASIEGTRMTVRSDRGREIVFDNREFTNIDLGYAGTIYRGQGKTLDQTYLLHTHHWRDAASYVAMTRARAQTEVFVGRDQAPSLRALSAQMARQSSRGSTLRYQATAEKEQQRAANMEREYEPGV
SIO_010081: DEF76_RS18715
subclass of: SO_0000673
so part of: DEF76_RS18715
location: 47595..48824
location: region:47595-48824:1
so has part: feature:47595-48824:1:exon

WP_162800771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47595-48824:1:exon

DEF76_RS18720
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18720
so part of: sequence
location: 49090..49329
location: region:49090-49329:1
so has part: feature:49090-49329:1:exon
subclass of: SO_0000010

position:49090:1
position: 49090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49329:1
position: 49329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49090-49329:1:exon

DEF76_RS18720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012553520.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Arc family DNA-binding protein
translation: MNLSIKNAPDEVVHRLRRRAERHHRSLQGELLAIIEAAAREDRPATPADILAEVRRLGVHTPSEAAALVRADRDARQGG
SIO_010081: DEF76_RS18720
subclass of: SO_0000673
so part of: DEF76_RS18720
location: 49090..49329
location: region:49090-49329:1
so has part: feature:49090-49329:1:exon

WP_114914030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49090-49329:1:exon

DEF76_RS18725
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18725
so part of: sequence
location: 49310..49690
location: region:49310-49690:1
so has part: feature:49310-49690:1:exon
subclass of: SO_0000010

position:49310:1
position: 49310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49690:1
position: 49690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49310-49690:1:exon

DEF76_RS18725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012553519.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MPVKVVDASAVAALLFGEPEADAVAAQLADSRLVAPGLLPFELANVCLIKSRRHPEQRTALMAAFRLYDRLSVEEVVVDHCAALELAETTGLTAYDASYLWLAQQLGAGLVTLDKQLAKAEATSPE
SIO_010081: DEF76_RS18725
subclass of: SO_0000673
so part of: DEF76_RS18725
location: 49310..49690
location: region:49310-49690:1
so has part: feature:49310-49690:1:exon

WP_114914031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49310-49690:1:exon

DEF76_RS18730
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18730
so part of: sequence
location: 49708..50160
location: region:49708-50160:1
so has part: feature:49708-50160:1:exon
subclass of: SO_0000010

position:49708:1
position: 49708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50160:1
position: 50160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49708-50160:1:exon

DEF76_RS18730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGVKSGCRPRVDVLQGELDDAIFAASFDKLTRGEGPLIYRDPALFFRNTHPTAALSKLCRDVFGRMASSTDSGAVLRLSTGFGGGKHTVLVITDPKDQPAGCHERRAAEAPRPRHRADWQRGGQGVSLAFIISRCRPGGLKFEHIRLSCY
SIO_010081: DEF76_RS18730
subclass of: SO_0000673
so part of: DEF76_RS18730
location: 49708..50160
location: region:49708-50160:1
so has part: feature:49708-50160:1:exon

WP_114914032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49708-50160:1:exon

DEF76_RS18735
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18735
so part of: sequence
location: 50195..50455
location: region:50195-50455:1
so has part: feature:50195-50455:1:exon
subclass of: SO_0000010

position:50195:1
position: 50195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50455:1
position: 50455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50195-50455:1:exon

DEF76_RS18735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020820064.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MPDDTTRWTVSVSKETDIAVRSFLAQRGMKKGDLSKFIEDAVRWRVLDQTVAEARSKFADMPPEELAALLDEAVAETRAAFEPKAG
SIO_010081: DEF76_RS18735
subclass of: SO_0000673
so part of: DEF76_RS18735
location: 50195..50455
location: region:50195-50455:1
so has part: feature:50195-50455:1:exon

WP_114914033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50195-50455:1:exon

DEF76_RS18740
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18740
so part of: sequence
location: 50459..50878
location: region:50459-50878:1
so has part: feature:50459-50878:1:exon
subclass of: SO_0000010

position:50459:1
position: 50459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50878:1
position: 50878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50459-50878:1:exon

DEF76_RS18740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007396268.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative toxin-antitoxin system toxin component, PIN family
translation: MQLVIDTNLLISSLLVSTSLPAHLIVLWREGRFDLLTSVAQLDELMRVTRYPKIRERLAPALAGRLINEVRNLAILVTNLPVVTASSDPYDNYLLAMASAGSADFLLTGDKRDLLGLKLFEGTKIITVHDFLVMHRRLP
SIO_010081: DEF76_RS18740
subclass of: SO_0000673
so part of: DEF76_RS18740
location: 50459..50878
location: region:50459-50878:1
so has part: feature:50459-50878:1:exon

WP_114914034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50459-50878:1:exon

DEF76_RS18745
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
gene: drmD
locus tag: DEF76_RS18745
so part of: sequence
location: 50875..54102
location: region:50875-54102:1
so has part: feature:50875-54102:1:exon
subclass of: SO_0000010

position:50875:1
position: 50875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54102:1
position: 54102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50875-54102:1:exon

DEF76_RS18745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
gene: drmD
locus tag: DEF76_RS18745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011083686.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DISARM system SNF2-like helicase DrmD
translation: MSPSPKDIQEGDFVEVRGKPWLVEALVGNDAELPILSLSCISDDAQGERLDVLWDAEIAGRVLDEDRWANVGVGHPDSADVLAAHIRAIRWRSATAADRDLLQAPFRAGIRLDAYQLLPLRKALRLPRVNLLIADDVGLGKTIEAGLVARELLLRRRVDFIVIAAPPAMTVQWKDELEAKFGLSFEIIDRDRISELRRLRGFSVNPWTTGSRFIVSHRLLTDETYAAGLRDVLGEFRAKALFVLDEAHHAAPSAGTRYAVSSQLTKAVRELAERFEHRLFLTATPHNGHSNSFSALLEMLDPQRFTRGVEVRPRDLEPVMVRRLKADLRRLGEAFPERVIEPVLIDGLPEDAPELVLARLLAAYGELRMKRIAKLSGQKAALAKLAFVGLQQRLLSSIAAFARTLKTHRATIQKVLDGEEVARMTTAATAFVAGPTPEDNAELGLEEEDAEKAMAADEDAEAATASAAGVVDATLEDLRAELAIVDEMLELAEKHAARPDARVKWLVEWIRNFMLDGRQWNQRRLIIFTEWEDTRRWLERRLREALADTDGIDDRIGVFSGATGSDRREQIKHAFNADPEGEPLRILICTDAAREGINLQSYCSDLLHFDLPWNPSRLEQRNGRIDRKLQPAKQVFCRYFRYEQREADIVLDALVWKTETIREELGSVGQVIEDRIAKRLAEDGIRRGQGKALARAISDEKDTERLSKAQAEMDDEEKARHERLLKEQDDLRRVLERSRERVGVDPEDLKRVAAAALSRVGFPLDNALGERVGRTVTYRLDPSDPAFSKDAGWDDAFDDLRVRPRKRGERLGDWRRNAPIRSIAFEPPVLDDGRDATDVVQVHLEHRLVRRLISRFLSQGFQSNLSRFSVITGPGAQPRVVLMGRLAVYGAGAARLHEEIIPITAIWTESERGRKPLRALGESGEERTLNQLEDALRSAREAPASAIARIQALVAQDIADLTPALESIAGERLATVKTQLAKRGDEEARSLAGLLEQQRDRIGKAAKEFNPDQLTLDLVPEERREREADRRHWQTRLARLEQELRDEPMRLRESYDVKAHRLEPVGIVYLWPVSG
SIO_010081: DEF76_RS18745
subclass of: SO_0000673
so part of: DEF76_RS18745
location: 50875..54102
location: region:50875-54102:1
so has part: feature:50875-54102:1:exon

WP_162800772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50875-54102:1:exon

DEF76_RS18750
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18750
so part of: sequence
location: 54108..56465
location: region:54108-56465:1
so has part: feature:54108-56465:1:exon
subclass of: SO_0000010

position:54108:1
position: 54108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56465:1
position: 56465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54108-56465:1:exon

DEF76_RS18750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18750
inference: COORDINATES: protein motif:HMM:NF014442.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-6 DNA methylase
translation: MADVLYRDPDLEWLDHVQPVGLVVAPSVLKELGLTPLHQSPVDTAEAAEHINSDEAGPALPDPWAFMQHVLGWNAAHVAGAPGGPELPGTLVVSLPEHATMLTPTWAVTELGQNGQPWQILVRIEAAGIAPDGRAQLDGWEASPHQRFERLLRDTGVFAGLLITDRELRLVYAPRGETSGYLSFPLRPLGMVAGRPMLGGLKLLLDSFRLFSDADERRLPALLKKSRDAQASVSTELAGQVLGALHELLRGLNAADADLIRELAASKPDHLYEGLLTVLMRLVFILYAEDRDLLPSRADARARAVYETSYSVRGLYARLVEDAALNPDTMDERRGGWGQLLALFRLIHKGHPSHFVQARGGKLFDPDEFPFLEGRKAEGDAPRILNVSDGCLLRILEGLMTLKLRGHERERLSYRTLDVEQIGSVYETVMGFTVKAARCNVLAIKAGKNNRTPVFVALDELLSHKGKDRIKDLKENVGRSLTAGQAKPVEAAKTVEELAAAFEGMVDERGSPRHATAPAGTPILQPTGERRRTGSHYTPRSLTQPVVAHALEPAFERLGPDATPEQILDLKVCDPAMGSGAFLVEACRAIATRLVAAWARWPETRPTVPADEDEELHARRLVAQRCIYGVDKNPRAVDLAKLSLWLATLAKDHEFTFLDHALKCGDSLVGLDAEQIAAMHWDTSKPGLPLFRQFVADRVSEATTARAEIRSAPDDTMRAILEQKHRFVESRIEHVRVLGDAVISAFFAGDKPKVREKRRATVESWVASIGSTKSPFQNRLYLDSI
SIO_010081: DEF76_RS18750
subclass of: SO_0000673
so part of: DEF76_RS18750
location: 54108..56465
location: region:54108-56465:1
so has part: feature:54108-56465:1:exon

WP_114914035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54108-56465:1:exon

DEF76_RS18755
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18755
so part of: sequence
location: 56479..57281
location: region:56479-57281:1
so has part: feature:56479-57281:1:exon
subclass of: SO_0000010

position:56479:1
position: 56479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57281:1
position: 57281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56479-57281:1:exon

DEF76_RS18755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MPAPQLSDSLWSILEPLLPPPRPRPKGGRPPISARAALTGILFVLRSGIPWEMLPREMGCGSGVTCWRRLRDWQAAGVWERLHRELLRRLQDANRIDWSRAALDSSAIAAKKGGAATGPNPTDRGRPGTKRHLVTDRHGIPLTFALTGANVHDSVPFEQMLDAIPAIRGKRGRPRRRPRKLHADKAYDHRRCRRACRQRGITPRIARRGVETSERLGRYRWVIERTFAWLNRFRRLTIRYERRIDIHSAFTSIACSLIALRALEGRF
SIO_010081: DEF76_RS18755
subclass of: SO_0000673
so part of: DEF76_RS18755
location: join(56479..56809,56809..57281)
location: region:56479-57281:1
so has part: feature:56479-56809:1:exon
so has part: feature:56809-57281:1:exon

WP_114910730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56479-56809:1:exon

position:56809:1
position: 56809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:56809-57281:1:exon

DEF76_RS19580
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS19580
so part of: sequence
location: 57712..58917
location: region:57712-58917:1
so has part: feature:57712-58917:1:exon
subclass of: SO_0000010

position:57712:1
position: 57712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58917:1
position: 58917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57712-58917:1:exon

DEF76_RS19580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS19580
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVSVVHLRRGLGSNDFYIDDKPTSRVSAYLSDINLDETPARLSKNLGKAFMGTKITGIGFTFDDREASRGNAASLKDMADLLTSHPNYEEVIFPFMGAEEVNNTPDHSFRRYVIDVADVSEATARERWPELVAVLERYVKPERDKLLTKGGWSAEIGRNWWRLAQRAERLDRLKRDISHVIVTASSAVMHHMFAYVPSRRVFSHKLIVVASQDVSVLGALQCRAHELWSRTFGTTFGSGDALTYSVSRVFATFPMPRLDELGSGPACESYLRGRTEILLAAQVGLTDIYGRFHDRNERSTLVARLRELHAEMDRAVLEAYGWRDLAERAAPIFLDESNEDDQTYQGRLFWPSDFRDEVLARLLALNAERHAEEVRLGIAPGMNGHPEAEDDVEASEGELTE
SIO_010081: DEF76_RS19580
subclass of: SO_0000673
so part of: DEF76_RS19580
location: 57712..58917
location: region:57712-58917:1
so has part: feature:57712-58917:1:exon

WP_162800773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57712-58917:1:exon

DEF76_RS18765
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18765
so part of: sequence
location: complement(58939..59142)
location: region:58939-59142:-1
so has part: feature:58939-59142:-1:exon
subclass of: SO_0000010

position:58939:-1
position: 58939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59142:-1
position: 59142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58939-59142:-1:exon

DEF76_RS18765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018290082.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2188 domain-containing protein
translation: MADNRMFIERRPETGDFAVRRPGSERASVVQPTQGAAIDWAKERGGDVFVERVRNTDRGHPDKWRRP
SIO_010081: DEF76_RS18765
subclass of: SO_0000673
so part of: DEF76_RS18765
location: complement(58939..59142)
location: region:58939-59142:-1
so has part: feature:58939-59142:-1:exon

WP_114914051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58939-59142:-1:exon

DEF76_RS18770
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18770
so part of: sequence
location: 59249..60361
location: region:59249-60361:1
so has part: feature:59249-60361:1:exon
subclass of: SO_0000010

position:59249:1
position: 59249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60361:1
position: 60361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59249-60361:1:exon

DEF76_RS18770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18770
inference: COORDINATES: protein motif:HMM:NF017885.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MTNLIGARIKALREERSLSQDDLARLFGFKDRQTVSAIETGERRVTADELLLAVEKLGAPLDYFTDPFLLVGEGRFSWRQTNVRPGVLGAYERNAGRWIAAFRAIAPQVGRASPLLRRALGLTRHARFEDAMEAGERFADEFELGEVPARRLAEVMEEKLRILVLMVDAFEGISGAACRLPALDVVLIHRHEVEGRRHFDLAHELFHILTWDAMPPEHAEESREVGGNRVEQLANNFASAVLMPKTVLARFGEWTDLKDAELTAKLNATADELLVTAPALKWRLVALDLLKPARARAISDAALRNNGHNGREAPKAAVPLLFSKPFMEVIGLAIDEGRISTRRAAGLLDLTVEDLKDLFVAHGVETPAEL
SIO_010081: DEF76_RS18770
subclass of: SO_0000673
so part of: DEF76_RS18770
location: 59249..60361
location: region:59249-60361:1
so has part: feature:59249-60361:1:exon

WP_114914037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59249-60361:1:exon

DEF76_RS18775
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18775
so part of: sequence
location: 60369..60884
location: region:60369-60884:1
so has part: feature:60369-60884:1:exon
subclass of: SO_0000010

position:60369:1
position: 60369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60884:1
position: 60884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60369-60884:1:exon

DEF76_RS18775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018291146.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARYHGSLLVDANVILEAHRIGAWAALTGGYPVETVEDCVTETQTGFQRRRSEQQIDAKSLRASLRAVHAPGDPEIAAAVVRAPDIALDIGERSLWAHALTRTGDWILCGSGRASLRFGVRLGHRDRLVSLEQLLDEAGHRLEESLNLAYTSKWLEKILGDLVLSEGVGQA
SIO_010081: DEF76_RS18775
subclass of: SO_0000673
so part of: DEF76_RS18775
location: 60369..60884
location: region:60369-60884:1
so has part: feature:60369-60884:1:exon

WP_114914038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60369-60884:1:exon

DEF76_RS18780
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
gene: drmA
locus tag: DEF76_RS18780
so part of: sequence
location: 60881..64408
location: region:60881-64408:1
so has part: feature:60881-64408:1:exon
subclass of: SO_0000010

position:60881:1
position: 60881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64408:1
position: 64408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60881-64408:1:exon

DEF76_RS18780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
gene: drmA
locus tag: DEF76_RS18780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011083688.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DISARM system helicase DrmA
translation: MTSSVDIRARLVNLFRRDLIGPGPQDPDLAAERLNESPSRWYLTGFLAPADDPLGLEGEDGDDDPSAQEEMEIDVEESDTEGAGGAAGDNEEPETPNTRRRFLPSSVGLTVLLSPDVKEIEARVSWGDYRTEPALPEAVLLPEPLPEEIGEDGKPKRATRPMVDWVRTPKERTVRLQIQDGRGSPMLVPESAAEQRRGGGLTLETHSRLFTYQTPEGHTEQVRALTVFLVNRRATVHRFYSDVSYAFQARLELGCEQGFRPRRDMSGYRAQDWDLRIADLHYRDVLEWAVGRNAAAGWEVNGDGNGPVTRVWTDPLPTAEVERVAPNEDAELKSHVTFSMEALAQAAESGSAALVQALDELPKLYGLWIDAERHKLLSLPQRRRETGQRLIDEMETAKNRITAGIQLLAQNDKARSAFRFMNLAVAMAARRRNAGASGDPQAMSAPTWRPFQLAFILLNLSGLAERTHPDREIADLLFFPTGGGKTEAYLGLAAFVIAHRRLTGSGLLGAGVAVIMRYTLRLLTLDQLTRAAGVVCALELMRTDPANANEQGRRLLGDWPIEIGLWVGSDASPNKLGGRGKSDESTAVGRVRRFKQGTDKRAPAPLKACPWCGTEFTRSSFACTPNDLAPTNLEIRCANATCDFNRNRPLPVLTVDEPIYRRLPAFLIATVDKFAALPWVGETGAFFGHVDRFEDGVGFYGAAEPGQGRPLANNGWSLDPPDLIIQDELHLISGPLGTVAGLYEAAIDQLASRRFGERVVRPKIVASTATVRRATDQIEALFDRGTTSIFPPPGVDRTDSFFAQTVPATKDPARMYMGIAAQGRGPKLVFLRSLTTLLAAAQSESGANAAPADPYMTAVCYFNALRELGGARRIVEDEVRDRAARYGTQRHRVDPPGNPFADRRIKEPLELTSRVSTDEVAKAKQRLETRFDNGADPVDVALATNMISVGLDITRLGLMIVQGQPKTAAEYIQATSRVGRDPLRPGLVVAVLNLHKPRDRMHFEQFGQFHRTFYRSVEATSVTPWAARALDRALAAVVVAAARHVDPTLTPELAVTAFKDNPAVRDAVRDAIVARAPTNMVAGGHAALAAAIDAIADAWITTAEDQAAGGNTFAYARKKSPHRLLHMPLEPDLPNLAEDHRRFVAGRSMRDVEPSVALKVRDPWGNQIASADDLA
SIO_010081: DEF76_RS18780
subclass of: SO_0000673
so part of: DEF76_RS18780
location: 60881..64408
location: region:60881-64408:1
so has part: feature:60881-64408:1:exon

WP_114914039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60881-64408:1:exon

DEF76_RS18785
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18785
so part of: sequence
location: 64405..66270
location: region:64405-66270:1
so has part: feature:64405-66270:1:exon
subclass of: SO_0000010

position:64405:1
position: 64405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66270:1
position: 66270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64405-66270:1:exon

DEF76_RS18785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011083689.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1998 domain-containing protein
translation: MTKNAQRLSQLISTFGPGAMIDLPTRSVVVAGLEYWEMRANAFTTIPEPRLTARLEQLLKDQGRLDPNISLSLRTPPIATDGVNGIPAGVTAPIFPTWFVCEQVEAAVTATATLRRRRLVRWQDLDTRGRRRFVFDDDRKSEVTPIRFVCACEKGHLQDIDWRWVVHGSVQCQEPLWLEEKGTSADPADTNIICGCGRSLSLQDAFQPGRLGKCRGERPWLLDRDPDGCGDNLKLLTRTATNTYFPQVYTVISLPSEEDDLARLVDELSGDLANVQTVEDVAQAKRFNPKVSVSLGGYPDREIFERLKRVRDGARADASRSPKTSEFDVFASGRQEIGHNHPAAKLYAETLPRATWADPSVSVDTSAIKNLVAVHRLREVSSLYGFTRFEAAPTSSDGDVEDIQLAVRGAPISRGADWLPAIEQFGEGLFIHVDEQAVNRWLQEPDVVGRQASLLRGYGHWRARFAGGAPNYPGTAYTLLHSLSHALIAEIALDSGYPASALKERIYALTDTRNGGAPSKCGILIYTATPGAQGTLGGLVAAGSRFSSILRSALDRLMICSNDPVCADHEPDGRSGDRATHGAACHGCLLIAETSCEMRNLFLDRSLLVQTMAGHRANFFD
SIO_010081: DEF76_RS18785
subclass of: SO_0000673
so part of: DEF76_RS18785
location: 64405..66270
location: region:64405-66270:1
so has part: feature:64405-66270:1:exon

WP_114914040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64405-66270:1:exon

DEF76_RS18790
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18790
so part of: sequence
location: complement(66368..66688)
location: region:66368-66688:-1
so has part: feature:66368-66688:-1:exon
subclass of: SO_0000010

position:66368:-1
position: 66368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66688:-1
position: 66688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66368-66688:-1:exon

DEF76_RS18790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003515190.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MAVTKGFKELVQRRVAKDPEFATALLREGIDTMLTGDVDTGKAILRDYIKATVGFGKLGEATDTPPKSLIRMFGPRGNPQARNLFGIIGYLQQQAGIELHVAVAPR
SIO_010081: DEF76_RS18790
subclass of: SO_0000673
so part of: DEF76_RS18790
location: complement(66368..66688)
location: region:66368-66688:-1
so has part: feature:66368-66688:-1:exon

WP_114914041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66368-66688:-1:exon

DEF76_RS18795
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18795
so part of: sequence
location: complement(66702..67028)
location: region:66702-67028:-1
so has part: feature:66702-67028:-1:exon
subclass of: SO_0000010

position:66702:-1
position: 66702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67028:-1
position: 67028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66702-67028:-1:exon

DEF76_RS18795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015824338.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MELRYYLAGNGYSPFEHWFTRPDAAAAAKVSVTLARLEQGNISNAKRGGEGVLEYRIDWGPGYRVYFGRDGDVLVILLTGGTKKRQQHDIKMAKGMWEDYRRRRPKAR
SIO_010081: DEF76_RS18795
subclass of: SO_0000673
so part of: DEF76_RS18795
location: complement(66702..67028)
location: region:66702-67028:-1
so has part: feature:66702-67028:-1:exon

WP_114914052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66702-67028:-1:exon

DEF76_RS18800
type: Gene
subclass of: SO_0000704
RO_0002162: 1969806
locus tag: DEF76_RS18800
so part of: sequence
location: complement(67302..67817)
location: region:67302-67817:-1
so has part: feature:67302-67817:-1:exon
subclass of: SO_0000010

position:67302:-1
position: 67302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67817:-1
position: 67817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67302-67817:-1:exon

DEF76_RS18800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1969806
locus tag: DEF76_RS18800
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQNKDTIIIQPDPTEDAQVAGFKSEPRPASVRKQWPASSWNAWPTSSESATKDLRFGMGMGSTHVSTPARRDRLWLIAAFAVMLLTLFGAAGKALGYDRFLKSNTATRRTHSLFRQGCILYELLPTMPEPRLLPLVQKFADMLVDLPVFAKSFGAVRKRGSPDLAIAKPR
SIO_010081: DEF76_RS18800
subclass of: SO_0000673
so part of: DEF76_RS18800
location: complement(67302..67817)
location: region:67302-67817:-1
so has part: feature:67302-67817:-1:exon

WP_162800774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67302-67817:-1:exon