Shewanella khirikhana strain TH2012 plasmid pSTH1, complete sequence.
type: Entry
definition: Shewanella khirikhana strain TH2012 plasmid pSTH1, complete sequence.
sequence version: NZ_CP020374.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_CP020374.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN06480555
keyword: RefSeq
source: Shewanella khirikhana
organism: Shewanella khirikhana
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP020374.1.\nBacteria and source DNA available from Dr. Kallaya\nSritunyalucksana, National Center for Genetic Engineering and\nBiotechnology (BIOTEC), National Science and Technology.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 27-APR-2016\nAssembly Method :: HGAP3 v. HGAP3\nAssembly Name :: STH1.0\nGenome Coverage :: 258.24x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 09:26:40\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,288\nCDSs (total) :: 4,159\nGenes (coding) :: 4,118\nCDSs (with protein) :: 4,118\nGenes (RNA) :: 129\nrRNAs :: 9, 8, 8 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 8, 8 (5S, 16S, 23S)\ntRNAs :: 100\nncRNAs :: 4\nPseudo Genes (total) :: 41\nCDSs (without protein) :: 41\nPseudo Genes (ambiguous residues) :: 0 of 41\nPseudo Genes (frameshifted) :: 20 of 41\nPseudo Genes (incomplete) :: 27 of 41\nPseudo Genes (internal stop) :: 10 of 41\nPseudo Genes (multiple problems) :: 14 of 41\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 50369
topology: circular
so has quality: SO_0000988
location: 1..50369
location: region:1-50369:1
RO_0002162: 1965282

NZ_CP020374
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN06480555
type: BioSample
SIO_000068: biosample

1
title: Full genome sequence of a non-lethal Shewanella isolate that potentiates virulence of Vibio parahaemolyticus causing acute hepatopancreatic necrosis disease (AHPND) in shrimp
author: Prachumwat, A.
author: Sritunyalucksana, K.
journal: Unpublished

2
title: Direct Submission
author: Prachumwat, A.
author: Sritunyalucksana, K.
journal: Submitted (17-MAR-2017) Shrimp-Virus Interaction Laboratory, Animal Biotechnology Research Unit, National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology, 113 Paholyothin Road, Tambon Khlong 1, Amphoe Khlong Luang, Pathum Thani 12120, Thailand

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50369:1
position: 50369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-50369:1:source
so part of: sequence
organism: Shewanella khirikhana
mol type: genomic DNA
strain: TH2012
isolation source: Hepatopancreas of EMS shrimp
host: Penaeus (Litopenaeus) vannamei (whiteleg shrimp)
type material: type material of Shewanella khirikhana
plasmid: pSTH1
country: Thailand: Chanthaburi
lat lon: 12.466689 N 102.136043 E
collection date: 2012-08-30
collected by: SPI/Centex Shrimp

1965282
type: Taxonomy
SIO_000068: taxonomy

STH12_RS21070
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21070
old locus tag: STH12_04237
so part of: sequence
location: join(49898..50369,1..1025)
location: region:1-50369:1
so has part: feature:49898-50369:1:exon
so has part: feature:1-1025:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:49898-50369:1:exon

position:49898:1
position: 49898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-1025:1:exon

position:1025:1
position: 1025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STH12_RS21070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21070
old locus tag: STH12_04237
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLNILKTVGIAAALTSLIGCVSQNYTDTKNAAHSVHDQISALSTITHNSQVQSISRPPISTTPLVIKKEIPWLNEPVSISAADVPLSLVMSQVMNGATHYNKPIRIWFDGDVNPNKRVTLAFKASREDVLNLIARQTEYGIHTTEDKVTISRFESETFVITIPPGVYSGQLGSQGTATSTGSGADTLNTRVEGQYLNTAYKDVDPVTQIKDSIVALLKDNNADEETLVGSVEVVPALTAIAVRTTPSRMAQVRNLVNSFQAQFAAQVMLDIRILEFRSSLGKERGVDWDLVKDIGSGSLEFMVPGTNTVTQGNVYGLAFKGTGKWDGTTAFIKALEKQGSVSTETPITALALSNQPSRIAQTLTKPYLYEVKSESNDKTVSASVTRATQSEGVDMMITPKVQNDAVWLRIAGKLSKIVGERSETVHDVQLQFLDTRESEINFTNKLLYGQTVVIGSIKQVSKTAEASKNFGIDALGGEGTTSETVETLVLLTPRRVQ
SIO_010081: STH12_RS21070
subclass of: SO_0000673
so part of: STH12_RS21070
location: join(49898..50369,1..1025)
location: region:1-50369:1
so has part: feature:49898-50369:1:exon
so has part: feature:1-1025:1:exon

WP_237158927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49898-50369:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-1025:1:exon

STH12_RS21075
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21075
old locus tag: STH12_04238
so part of: sequence
location: 1022..2152
location: region:1022-2152:1
so has part: feature:1022-2152:1:exon
subclass of: SO_0000010

position:1022:1
position: 1022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2152:1
position: 2152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022-2152:1:exon

STH12_RS21075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21075
old locus tag: STH12_04238
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIHTLDLPYLATLPNAKSALKEHRQQNPALYERVFTRNAQTLRYYADLPSACVGQFIADTMVTDDADFLFFHVLENQEIYALYVKGHVVQREQIGLHNTILDSFGYELHQGVQIVLTSEQLPLEYEPAAAPKVISLSLGDIPADYQLVSSGRIQPKHVGGLAVFAIGLIGFVLWSSQPEPIQQSPQIDPWQQWAMEFIAQAPADTALKQVAIALAYHNLLPPDWTSDGVMVSGQTIVMPLKPVTEGQAKLGTIQAFALRYPELSLDIETKQLAFHVAPREKPELVSLGNYPMRLHDALLALGATHVTLTDAMSIGTVSRIKIAATFTDVSPAWFGTIGDSVKSEPVFLQQLSLSNGANNNVTGSLELIIEGVDADL
SIO_010081: STH12_RS21075
subclass of: SO_0000673
so part of: STH12_RS21075
location: 1022..2152
location: region:1022-2152:1
so has part: feature:1022-2152:1:exon

WP_126169612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1022-2152:1:exon

STH12_RS21080
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21080
old locus tag: STH12_04239
so part of: sequence
location: 2163..2759
location: region:2163-2759:1
so has part: feature:2163-2759:1:exon
subclass of: SO_0000010

position:2163:1
position: 2163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2759:1
position: 2759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2163-2759:1:exon

STH12_RS21080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21080
old locus tag: STH12_04239
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTANKQPVTKSKIALAATLAVAVLGYGSYAVYDAVTPTPTAIQDSPTTAQAPLTHTPEAQPLAKPAISRQVVFVPSAAASDIIRYEQQASVQAARLTALTAQKLADEAANKLTPPQPIAALIEQQAKTPKEPSLLDLIVVKSLIASGGEIVGMVSVGDELIDVKRGSRIGNVSVIALTADSITFTDGDTTKTRRVKQY
SIO_010081: STH12_RS21080
subclass of: SO_0000673
so part of: STH12_RS21080
location: 2163..2759
location: region:2163-2759:1
so has part: feature:2163-2759:1:exon

WP_126169613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2163-2759:1:exon

STH12_RS21085
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21085
old locus tag: STH12_04240
so part of: sequence
location: 2847..4382
location: region:2847-4382:1
so has part: feature:2847-4382:1:exon
subclass of: SO_0000010

position:2847:1
position: 2847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4382:1
position: 4382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2847-4382:1:exon

STH12_RS21085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21085
old locus tag: STH12_04240
inference: COORDINATES: protein motif:HMM:NF012652.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase, T2SS/T4P/T4SS family
translation: MALSDGTVLTSDFNAKKIAQIREYISASKTLHNGSLFGKPTTVKKVTTSEIEHYLSQLESQSNGIHDTSITDSEPSKRLHDYLQSGVDNRCSDMHIEVHENSTVIYARVDGRRILLSEIPDPSYGEQLFSYIFNSKATEKDADYVAKDANNGHVEEMLLCSEVTHDTHDVNKVLRNTSWRVAYVPAKRGGRCTMRWLDASSTIPKLDEMGWTNGHVAVLRDYLEKPSGVCIISGKTGSGKTTVLASALNEIPPERSVVTLEDPPEFPLAKAIQIQIKPNMPVKEGSEEMLGFGYYSKQTLRHDVDVEMHGEIRDKTGAMELTRKGETGQLMFTTLHTSSATGIAHTLTEQMHVPAAVIAAPELMRLWIYQTLVRKVCPHCCLTAEQAADYYQDRSENNVLYWLNHIEQLCEGETQGIRFRDPSGCKHCTEGERGRTALVEMIVLDDEDRAFIIKKDYLGWKTALKEKGFRDVRDHAISKIKAGLIDVVTASKKVNNLLPITSADVYKTFEM
SIO_010081: STH12_RS21085
subclass of: SO_0000673
so part of: STH12_RS21085
location: 2847..4382
location: region:2847-4382:1
so has part: feature:2847-4382:1:exon

WP_164551323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2847-4382:1:exon

STH12_RS21090
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21090
old locus tag: STH12_04241
so part of: sequence
location: 4394..5425
location: region:4394-5425:1
so has part: feature:4394-5425:1:exon
subclass of: SO_0000010

position:4394:1
position: 4394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5425:1
position: 5425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4394-5425:1:exon

STH12_RS21090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21090
old locus tag: STH12_04241
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKSLEQLFFNHKKQIKLLRNIHRLARAGVEQKRIAEQLIKYGQPTERKIGEGILRSIANGQGFSLGTKPWLDPLAFEALAAGEHTGEWARGVQNAIITLSSKSASTSLLVKALWKPLAGIVAMLAVSAGISRYMFPMLDGIMIRGRKGHISQLAASFGDFWLDWGLVIGSITLLIVIAVFLSLSVMTGTLRKQLDNFPVYRQYRLIQTGAFLRSMGNLTLAGFGLKEALLQTQKHANRYLLHHIADMLKKIEWGEKNLGNIMATGLLNNAEEDSLYLLGQIGGTAETLLNSADIHHELLIDEIELIKSIGINVLKIIGFCIGVLMGGGVISQIMDIATNVAA
SIO_010081: STH12_RS21090
subclass of: SO_0000673
so part of: STH12_RS21090
location: 4394..5425
location: region:4394-5425:1
so has part: feature:4394-5425:1:exon

WP_126169615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4394-5425:1:exon

STH12_RS21095
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21095
old locus tag: STH12_04242
so part of: sequence
location: 5529..6023
location: region:5529-6023:1
so has part: feature:5529-6023:1:exon
subclass of: SO_0000010

position:5529:1
position: 5529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6023:1
position: 6023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5529-6023:1:exon

STH12_RS21095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21095
old locus tag: STH12_04242
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKNVNMKNRERGASTTDMIIWAALIIGALIFTISKVPDIRYALRVAAFQADTATIGDAAYRWKKMRPNYTGISIGVLCTDKYLPETICGTSNNGVATNQFGGNWTVAVNANPGLYNIVATIPNDPTRMNDLADTMASATRGNCTKASGCSTITATGTTLTMTF
SIO_010081: STH12_RS21095
subclass of: SO_0000673
so part of: STH12_RS21095
location: 5529..6023
location: region:5529-6023:1
so has part: feature:5529-6023:1:exon

WP_237158929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5529-6023:1:exon

STH12_RS21100
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21100
old locus tag: STH12_04243
so part of: sequence
location: 6032..6544
location: region:6032-6544:1
so has part: feature:6032-6544:1:exon
subclass of: SO_0000010

position:6032:1
position: 6032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6544:1
position: 6544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6032-6544:1:exon

STH12_RS21100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21100
old locus tag: STH12_04243
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTTRYQNGVATTEFAIGLSCSFLLSVVMWVAVIRPLLNYVDAVEVDTAVENVKHAAKHFYGKDISQTHCYQPSKPLSLTNLINDQFIASELVIGKPYQLAVSYELKSNGSWSRPTAINIDVTFATADELVKVASYLDATWMSPTQLRFTQPIEFRVDWRVFNPATGCQH
SIO_010081: STH12_RS21100
subclass of: SO_0000673
so part of: STH12_RS21100
location: 6032..6544
location: region:6032-6544:1
so has part: feature:6032-6544:1:exon

WP_126169616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6032-6544:1:exon

STH12_RS21105
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21105
old locus tag: STH12_04244
so part of: sequence
location: 6541..7506
location: region:6541-7506:1
so has part: feature:6541-7506:1:exon
subclass of: SO_0000010

position:6541:1
position: 6541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7506:1
position: 7506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6541-7506:1:exon

STH12_RS21105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21105
old locus tag: STH12_04244
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTLQHQKGFANIVMLIVGLSMLMYLMMYGQQRFKIMQIQNVIKPFYQHLDHIKNQVNAYQIDQIAQGWPPSSAAVFPNTWSNLQPAYLPNCSTTDNNAGKCRKPEQTPWGTSMAMTRISSPIPSSPLPRYRLQIQIPLPNATSDATRLEHQAVLELFGRFPGSEYIEASNSLIVWIDRIDTGVQQDALVKRSGDDSTLTGDWDVGGNYAITNAKDFTIRNTDGSQRRLGAGTVSTVTAKHNQRITKHTCPVGLTPAITTSIKGIFNETDPNFSFANVGSSRSYTVNSSTYWTVKLDYLATVNGVVSERHDGEVIVQLICQ
SIO_010081: STH12_RS21105
subclass of: SO_0000673
so part of: STH12_RS21105
location: 6541..7506
location: region:6541-7506:1
so has part: feature:6541-7506:1:exon

WP_126169617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6541-7506:1:exon

STH12_RS21110
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21110
old locus tag: STH12_04245
so part of: sequence
location: 7518..8195
location: region:7518-8195:1
so has part: feature:7518-8195:1:exon
subclass of: SO_0000010

position:7518:1
position: 7518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8195:1
position: 8195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7518-8195:1:exon

STH12_RS21110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21110
old locus tag: STH12_04245
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNIIVLSLMLGSCFMTAIAADTEKMTFEKAAQSHNATFGQYSEQSITEQQSQLAWDSYPQYPDQIQTGSNGQLQEVWTGRATTVTNQWGQGDYYVEMTFNKQNTAGSVWLTVDNTNLKKSVAVPSPYNYEANWHIMYERGVFRAEGLGKGSTTPSITRIAKFPTPQLNDCTAGQTESEPLYCTGSGQRTCEEGRRSRSCASNGGWLPWQTTRQPSCVTGTQQCR
SIO_010081: STH12_RS21110
subclass of: SO_0000673
so part of: STH12_RS21110
location: 7518..8195
location: region:7518-8195:1
so has part: feature:7518-8195:1:exon

WP_126169618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7518-8195:1:exon

STH12_RS21115
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21115
old locus tag: STH12_04246
so part of: sequence
location: 8268..8522
location: region:8268-8522:1
so has part: feature:8268-8522:1:exon
subclass of: SO_0000010

position:8268:1
position: 8268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8522:1
position: 8522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8268-8522:1:exon

STH12_RS21115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21115
old locus tag: STH12_04246
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014610906.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MQTSIKKWGNSAGAIIPAAVLKKAGFGMGDQVEIEVVQGRIVMSPATPTFTLDELLNASPKGAFELDSEDTQWLSSSPVGKEEI
SIO_010081: STH12_RS21115
subclass of: SO_0000673
so part of: STH12_RS21115
location: 8268..8522
location: region:8268-8522:1
so has part: feature:8268-8522:1:exon

WP_126169619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8268-8522:1:exon

STH12_RS21120
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21120
old locus tag: STH12_04247
so part of: sequence
location: 8522..8851
location: region:8522-8851:1
so has part: feature:8522-8851:1:exon
subclass of: SO_0000010

position:8851:1
position: 8851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8522-8851:1:exon

STH12_RS21120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21120
old locus tag: STH12_04247
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014610905.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MSYTPKRGDIVWVDFDPSAGHEQAHHRPALVLSPEPFNKQIQLALVAPITSRVRGHGFEVAVDTDKTKGVVLCQQVKTIDYAARGIKFIEKAPVAVLNEVLAKVRVLVS
SIO_010081: STH12_RS21120
subclass of: SO_0000673
so part of: STH12_RS21120
location: 8522..8851
location: region:8522-8851:1
so has part: feature:8522-8851:1:exon

WP_126169620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8522-8851:1:exon

STH12_RS21125
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21125
old locus tag: STH12_04248
so part of: sequence
location: 8953..9948
location: region:8953-9948:1
so has part: feature:8953-9948:1:exon
subclass of: SO_0000010

position:8953:1
position: 8953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9948:1
position: 9948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8953-9948:1:exon

STH12_RS21125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21125
old locus tag: STH12_04248
EC number: 3.4.21.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198027.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trypsin-like serine protease
translation: MKKALIALSLLGLSNPGTAIENGTPVDWTAHDDMVKINCTGTLIGGKWVLTAMHCDPNSHQGVTTVNGLINVESVINNPSTDYALDIGLWKLSSAAETKNIRFLSSRNIEAGERIKITGFGAGAGLQALAYAEQIALPPTEARPEWITLKMDGNGNTVPGDSGAPYTDSNGRIVGIHKAGGIDAETGINAKGSRLHYAKDWVLETINAWHFPTLANTPTSGGSVTIEVQSLHADAFIDNATASGDATITGGTCFGATVQPFDICTYTVASNGYEGTVTLDGEQKITINKGRTKPITPPTPPSDSSSGGSLGFVSLIALAGFGLARRKILAK
SIO_010081: STH12_RS21125
subclass of: SO_0000673
so part of: STH12_RS21125
location: 8953..9948
location: region:8953-9948:1
so has part: feature:8953-9948:1:exon

WP_126169621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8953-9948:1:exon

STH12_RS21130
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21130
old locus tag: STH12_04249
so part of: sequence
location: 10011..10679
location: region:10011-10679:1
so has part: feature:10011-10679:1:exon
subclass of: SO_0000010

position:10011:1
position: 10011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10679:1
position: 10679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10011-10679:1:exon

STH12_RS21130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21130
old locus tag: STH12_04249
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGSIFFTLVLIVALFTFLQNIPQTKLANRPKILLSNGFVRARYDLATRFFAHSVCITVPLTIIGLLPIAEMAFCTTTFAALGVLIPPELRLNSDSELVVTKSLFGSCAEIHLRNPYQSFTRRTYQELLRLVEYLPDKGIKRLKLTSPMFYRADGTLREFSTLEKLLAPKNAILSSYKAKPWRNFLGQLSMIVDGGKAKKEKISNINLNKWHVLDIQISKNKE
SIO_010081: STH12_RS21130
subclass of: SO_0000673
so part of: STH12_RS21130
location: 10011..10679
location: region:10011-10679:1
so has part: feature:10011-10679:1:exon

WP_126169622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10011-10679:1:exon

STH12_RS21135
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21135
old locus tag: STH12_04251
so part of: sequence
location: complement(10866..11261)
location: region:10866-11261:-1
so has part: feature:10866-11261:-1:exon
subclass of: SO_0000010

position:10866:-1
position: 10866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11261:-1
position: 11261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10866-11261:-1:exon

STH12_RS21135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21135
old locus tag: STH12_04251
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015885378.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQNEFGFYFMHPIIQKTFGGLSKPYYFRHFVFGLVFVALFMFISLENPSDISISGMVLCLVNAFLYPYSRFVYESLVGFILGNNMLVVPVPLMLFAKLMTMAICFVLAVVIAPIGLAYLYYHHTKQANQS
SIO_010081: STH12_RS21135
subclass of: SO_0000673
so part of: STH12_RS21135
location: complement(10866..11261)
location: region:10866-11261:-1
so has part: feature:10866-11261:-1:exon

WP_237158930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10866-11261:-1:exon

STH12_RS21140
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
gene: traF
locus tag: STH12_RS21140
old locus tag: STH12_04252
so part of: sequence
location: 11327..11851
location: region:11327-11851:1
so has part: feature:11327-11851:1:exon
subclass of: SO_0000010

position:11327:1
position: 11327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11851:1
position: 11851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11327-11851:1:exon

STH12_RS21140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
gene: traF
locus tag: STH12_RS21140
old locus tag: STH12_04252
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198032.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0008233 - peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transfer signal peptidase TraF
translation: MKKATALLLFVMLFSVTASLAYFMGIRINTSQSYPPGVYVVSTAPTYEKNDLVLFCPPNTAIITEAIKRGYIDTGRCDSGTVPIMKRIVGLAGDYVEFTPTITINHSILPDSIRLHADGANRPLPQLPPFTVSDNAFFAYSDHAPRNSFDSRYFGEVPTSNIIGTIRPLMLFPI
SIO_010081: STH12_RS21140
subclass of: SO_0000673
so part of: STH12_RS21140
location: 11327..11851
location: region:11327-11851:1
so has part: feature:11327-11851:1:exon

WP_237158931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11327-11851:1:exon

STH12_RS21145
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21145
old locus tag: STH12_04253
so part of: sequence
location: 11876..12127
location: region:11876-12127:1
so has part: feature:11876-12127:1:exon
subclass of: SO_0000010

position:11876:1
position: 11876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12127:1
position: 12127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11876-12127:1:exon

STH12_RS21145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21145
old locus tag: STH12_04253
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEHPQPLPADDIEALQCDQRPLFELEYNGHPVFVDMLTLLQCLKIAEHTHHIPAISPQWWLQITKEYPVEVNLDGRIQTAKE
SIO_010081: STH12_RS21145
subclass of: SO_0000673
so part of: STH12_RS21145
location: 11876..12127
location: region:11876-12127:1
so has part: feature:11876-12127:1:exon

WP_126169623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11876-12127:1:exon

STH12_RS21150
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21150
old locus tag: STH12_04254
so part of: sequence
location: 12099..13007
location: region:12099-13007:1
so has part: feature:12099-13007:1:exon
subclass of: SO_0000010

position:12099:1
position: 12099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13007:1
position: 13007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12099-13007:1:exon

STH12_RS21150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21150
old locus tag: STH12_04254
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDVFKLRKSDTHAFIITRENFEYHTKQQPPWYQSLDGRTESHLAVCPACDNTISIIGLHASDTELDEETDTIGTKKSRPPHGRHYLFKQLDNLGVLDREAYENCPYAGKPTLSINKKHSAKSHIPSAILSILSTDFDRVIYLLTTSIGIGISNKEAASMATRYRQAEGWKYAGATIMNIPWIFGYFSRSTPLMFKSIKREALRAAIQAHYPDARFEGEYFRLERTGSYMNPCFCFEKHTRKTVDEHLIETIDLVLSDDQGAEFYREPITFDPQHFTALIHSNKANYRSQKLIEFGRQMFRSE
SIO_010081: STH12_RS21150
subclass of: SO_0000673
so part of: STH12_RS21150
location: 12099..13007
location: region:12099-13007:1
so has part: feature:12099-13007:1:exon

WP_126169624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12099-13007:1:exon

STH12_RS21155
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21155
old locus tag: STH12_04255
so part of: sequence
location: complement(13052..13435)
location: region:13052-13435:-1
so has part: feature:13052-13435:-1:exon
subclass of: SO_0000010

position:13052:-1
position: 13052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13435:-1
position: 13435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13052-13435:-1:exon

STH12_RS21155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21155
old locus tag: STH12_04255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014610936.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MQINPIRTVADNKAALKRIEQLFDAEPNTPDGDELEILITLVTAFEDAQFSIEAPDPIAAIRFRMEQQGLVDADMVPFLGQRSRVSEVLNRQRRLSLSMIRKLNEGLKIPLECLIKDYQLVKTAATK
SIO_010081: STH12_RS21155
subclass of: SO_0000673
so part of: STH12_RS21155
location: complement(13052..13435)
location: region:13052-13435:-1
so has part: feature:13052-13435:-1:exon

WP_126169625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13052-13435:-1:exon

STH12_RS21160
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21160
old locus tag: STH12_04256
so part of: sequence
location: complement(13446..13745)
location: region:13446-13745:-1
so has part: feature:13446-13745:-1:exon
subclass of: SO_0000010

position:13446:-1
position: 13446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13745:-1
position: 13745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13446-13745:-1:exon

STH12_RS21160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21160
old locus tag: STH12_04256
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010320053.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HigB family toxin
translation: MRVVSRATLRDFWEQPGYQDSEQPLKSWYEEAKCATWRNPQEIKAQYRNASFVGNNRVVFNIHGNKYRLIVAVKYDFSMVYVRFVGTHAEYDSVDATTI
SIO_010081: STH12_RS21160
subclass of: SO_0000673
so part of: STH12_RS21160
location: complement(13446..13745)
location: region:13446-13745:-1
so has part: feature:13446-13745:-1:exon

WP_126169626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13446-13745:-1:exon

STH12_RS21165
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21165
old locus tag: STH12_04257
so part of: sequence
location: 13838..15721
location: region:13838-15721:1
so has part: feature:13838-15721:1:exon
subclass of: SO_0000010

position:13838:1
position: 13838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15721:1
position: 15721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13838-15721:1:exon

STH12_RS21165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21165
old locus tag: STH12_04257
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198033.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MKIKDHNNKVGGEMRSPKKQRQFMPLAIVSASVLVGLQLATQHFAHTFGYQPQLGENFYNLYLPTNILTWAFEWYSIYPSQFITSGSVGMVATALGFIAALTNKVRQSSQSKPNQFLHGSARWANRSDIENAGLLKSATSTDDDTGTGVYVGAWVDDDGVIHYLRHSGAEHVLCYAPTRSGKGVGLVIPTLLSWRKSALITDLKGELWELTAGWRKQMGQKVLRFEPASRHSICWNPIDEIRVGTDFEVGDIQNLCTLIVDPDGKGLNDHWQKTAFSLLCGVVVHTIYKCQAEGKTASLPAIDAMLSEPNRNISDLWNEMVSYPHINGSSHPLAGAAGQDMIDRPEEEAGSVLSTAKSYLMLYRDPVVAATVRKSEFAIKDLMHHGDPVSLYIITQPVDKERLKPLVRIMVNMIIRLLAADMKFEHGRPVANYKHRLLGMIDEFPSLGKLDVLQESLAFVAGYGIKFYLICQDINQLKSEKTGYGRDEQITSNCHVQNAYPPNRMETAQHLASLTGETTIIKEQITTSGKRFSASHTNVSRTFTETKRTLLTPDECMRLPAPDKNAKGEIVKAGDMVIYVAGYPAIYGRQILYFKDPVFSERAAIPAPKNTDRIRTPTPPQKFTLND
SIO_010081: STH12_RS21165
subclass of: SO_0000673
so part of: STH12_RS21165
location: 13838..15721
location: region:13838-15721:1
so has part: feature:13838-15721:1:exon

WP_126169627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13838-15721:1:exon

STH12_RS21170
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21170
old locus tag: STH12_04258
so part of: sequence
location: 15818..16132
location: region:15818-16132:1
so has part: feature:15818-16132:1:exon
subclass of: SO_0000010

position:15818:1
position: 15818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16132:1
position: 16132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15818-16132:1:exon

STH12_RS21170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21170
old locus tag: STH12_04258
inference: COORDINATES: protein motif:HMM:NF012651.2
GO function: GO:0003697 - single-stranded DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MFIKLCRIGQDAITRYTPQGTAVTVISCAYSVGYGEHEKTQWIEAEYWGERGQKLAEKLTKGRQILLTADDVYIDTFTKADHSTGFKLKCRVVGIDFTSGSQPQ
SIO_010081: STH12_RS21170
subclass of: SO_0000673
so part of: STH12_RS21170
location: 15818..16132
location: region:15818-16132:1
so has part: feature:15818-16132:1:exon

WP_126169628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15818-16132:1:exon

STH12_RS21175
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21175
old locus tag: STH12_04259
so part of: sequence
location: 16145..18199
location: region:16145-18199:1
so has part: feature:16145-18199:1:exon
subclass of: SO_0000010

position:16145:1
position: 16145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18199:1
position: 18199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16145-18199:1:exon

STH12_RS21175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21175
old locus tag: STH12_04259
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198034.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase 3
translation: MERLFIAEKPSVARAIAEVLGITGKGNGYIECGSDTITWCFGHMLEQAEPDHYTSADTPVRDGKKIWRVEDLPVIPKEWILHPKADAKAQLTQIGTLLKQAQTVVNCGDPDREGQNLVDEVLTHYQSQAPVLRYWSSGIDSVSVERALNSLFDNTEKKTFGDASIGRQRADWLIGMNLSRAFTLRAERGGSRALITVGRVQTPVLSMVVNRDRDIENFKPVPFHTLRATLQSTDGEFSAKWKAKEEQAGLDSEGRLINTEIADALVSSMTGSPASITEAKSTAKKAHHPLTYSLSNLTVAASKQFGYSAQNVLDTCQALYEKHKLTTYPRTDCGYLPESQFADVPDILEALKQVNPELTPVIDKADPKLKSKTWDDSKLTAHHGIIPTHEVANKSALSEMERNIYELIVRTYIAQFYPVHEYRSIQINIEIGGECFTASGKVITLNGWKDVYREADDDTEKEEEQHLPNVQKGDSLTCLAIERKDAKTKPPSRFNEGTILAAMVGIHKFVDDPAMKKLLREEDGLGTEATRAGILTELKNRGYLVEQGKALVSSPLGRSIVDALPTMVKSPVLTALVERQLKDVESGKLSLDAFTAAQVKFVTEQVEKANVGAVKIAGAKPPLPVSELYKCLLCNHGLVRRPTSTKGRYWWGCSQYPTCTQMYADINGRPNYAKPIQPKETAPQ
SIO_010081: STH12_RS21175
subclass of: SO_0000673
so part of: STH12_RS21175
location: 16145..18199
location: region:16145-18199:1
so has part: feature:16145-18199:1:exon

WP_126169629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16145-18199:1:exon

STH12_RS21180
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21180
old locus tag: STH12_04260
so part of: sequence
location: 18276..18461
location: region:18276-18461:1
so has part: feature:18276-18461:1:exon
subclass of: SO_0000010

position:18276:1
position: 18276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18461:1
position: 18461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18276-18461:1:exon

STH12_RS21180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21180
old locus tag: STH12_04260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013646172.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
translation: MSKNQPHITEQVKAKLLDSETPGFQAEFSPEEAEAIGAFEETALTESDALASVIDLEGNHD
SIO_010081: STH12_RS21180
subclass of: SO_0000673
so part of: STH12_RS21180
location: 18276..18461
location: region:18276-18461:1
so has part: feature:18276-18461:1:exon

WP_126169630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18276-18461:1:exon

STH12_RS21710
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21710
old locus tag: STH12_04261
so part of: sequence
location: 18454..21744
location: region:18454-21744:1
so has part: feature:18454-21744:1:exon
subclass of: SO_0000010

position:18454:1
position: 18454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21744:1
position: 21744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18454-21744:1:exon

STH12_RS21710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21710
old locus tag: STH12_04261
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012197988.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MTKAPKKAFHETVAETLISLLEKGTAPWQKPWIPGSPPSQPYNPSSNNRYKGINVLNLMAQGYQDPRWLTYNQAKALNAQVIKGERGTQVQYWKFAENQQKTDDKGNPVFDSQGKPVMELVPLERPKVFFAVVFNAQQIDGMPPLTYEAAKPEQLWEAQERVEKMLLASGASITHDQCNRAFYRLSTDRIHLPEKHQFPDMAGYYATALHELGHWTGHPSRLARDLGHPFGSTGYAKEELRAEIASMILGEETGIGHDPEQHAAYVGSWIKALKEDPLEIFRAAADAEKIRGFVLALEQQQTIQQTPPQSADIPAILATPWLLADDVEAYGEHAGHWIVVTLDHEKELPGGPWEHLDDAKQAADFINLKAAAYLEKADKELALQDVYSTRQQVLSSVISMLPENMLLALTDIAEERKQLINGSGNSSEAYERKAIELFGSAIPLDFNGHVIVKSRAEGEVPEFFGIYVQQANGKEQWIANRDTPKEASELSSWLKLVDAFSEPNTAEQTAKLASVNVTLVFQDPHSTVDDKSAAQELRKTAEMEALLSSDDMKQRIAKQLTGIPDQGSPSKEIEQARHYINVPYKEKAEAKKLGARWDREQQSWFVPPGVNVAPFTKWPEIEQAPVQTKQPQKRYLAVPYEERKEAKAAGAKWDKTATSWYIDGEKFTDKVLKWLPENRPTEQAPAMTHREELALAMQDMGFDVTGEHPIMDGQKHRCRLLSDKASVSDKSGSGMYVAFMDGIPAAYIANNRTGESRNWSSKGYSMTDEEKAALNAQAAAKRQAREAAQAAERQSVAAGISNLLNVCNSPTGNEKYLQIKQAKVGNLLVVPEPSAFPNDAKILIGTNWKASQALRANNPNHVVFTTGDLIVPAHDTSGKIWTVQTIQPNGVKMFPKGSQKTGSFHIVGGDMDALAKAPVILLSEGYATADTLSEAAELPVVSSFDAGNLIVVAKALREMHPSKPMLICGDDDAHQLMTEGKNVGRENATVAAEAVNGATLFPLFAPREQHYPVDLPPVTPTAWRDKHLTQAQSDAIEKMKGFTDFNDLKVKSALGIDGVKRQVKLAINELLNRLPQQHTSTQEQNAKKSKSHSLTM
SIO_010081: STH12_RS21710
subclass of: SO_0000673
so part of: STH12_RS21710
location: 18454..21744
location: region:18454-21744:1
so has part: feature:18454-21744:1:exon

WP_237158932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18454-21744:1:exon

STH12_RS21190
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21190
old locus tag: STH12_04262
so part of: sequence
location: 21813..22283
location: region:21813-22283:1
so has part: feature:21813-22283:1:exon
subclass of: SO_0000010

position:21813:1
position: 21813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22283:1
position: 22283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21813-22283:1:exon

STH12_RS21190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21190
old locus tag: STH12_04262
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017108479.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQIVIYQPSDVTTALAAQKTAKNARIANTSGQVSFGIFPLNSHGYQSAPIILKLGFIGYASQRTGAYGLRHIWEKHGQEIGISNPSDVPSFIESILIPGAEVIIDSTKSAKPLIIESKTGLITVGFSTPPNEAPHYHIITAYTRKNHPGTVIATL
SIO_010081: STH12_RS21190
subclass of: SO_0000673
so part of: STH12_RS21190
location: 21813..22283
location: region:21813-22283:1
so has part: feature:21813-22283:1:exon

WP_126169631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21813-22283:1:exon

STH12_RS21195
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21195
old locus tag: STH12_04263
so part of: sequence
location: complement(22541..24694)
location: region:22541-24694:-1
so has part: feature:22541-24694:-1:exon
subclass of: SO_0000010

position:22541:-1
position: 22541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24694:-1
position: 24694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22541-24694:-1:exon

STH12_RS21195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21195
old locus tag: STH12_04263
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012197991.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MIAKHVPINSLKKSDFANLVNYITDSQDKIDRVGQISFSNCHSNNLDMAINEILATQQMNTRTTKDKTYHLIVSFRAGENPSKDILNDVEKTICQDLGFAEHQRVSVVHYDTDNVHMHIAINKIHPEKLTAVEPFYPYKTLAKSCASLEKKHGLDVDNHISLKIPSSGRASDLEHHSGIESLAGWIKRVCYEDIKSSKNWDELHKVMAFNGLALHKKGNGFVIESVESGVFVKASTVDRAFSKAKLEAKFGEFKESDFVGDKKRFYQKEPKKMRVDTSGLYARYLKEQANNRKRKTSILNALKRRKQFEVEMIKRSGKLKRILISLSDNYLMRKVLYRQASKSLKDNIKKINQKYQNERLALNKNNRRHTWADWLREQAEAGNVEALNALRARKGATLKGNTFSGQDSRHVKSGEVVTKGGVVRYQQGAEAGIRDDGQQLKIVRNITAEGVITALRMAQERFGNMLTVNGTDEFKALAVKAAVVGHVRVVFSAPELEKLKQKLLLEKQHDEINRRIIAGRGFNRAGDGADGRRTADRNDFRPWDEFASGVRSEQKSDVGAFGARSARQAAAGYNSVRHLSSIDVASIIKPSTVLLPGDACNDMDKQRSGRGADALRWNVFHSKITAAQMAAAEAYISERLDKRDQGILVPEHRPLTRPTKTAYLGARKVNGVSLMLFAEPDGAVAVFPVSTLKQFKVGELVSVNKDGVVSRARRTRR
SIO_010081: STH12_RS21195
subclass of: SO_0000673
so part of: STH12_RS21195
location: complement(22541..24694)
location: region:22541-24694:-1
so has part: feature:22541-24694:-1:exon

WP_126169632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22541-24694:-1:exon

STH12_RS21200
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
gene: traJ
locus tag: STH12_RS21200
old locus tag: STH12_04264
so part of: sequence
location: complement(24691..25080)
location: region:24691-25080:-1
so has part: feature:24691-25080:-1:exon
subclass of: SO_0000010

position:24691:-1
position: 24691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25080:-1
position: 25080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24691-25080:-1:exon

STH12_RS21200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
gene: traJ
locus tag: STH12_RS21200
old locus tag: STH12_04264
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012197992.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer transcriptional regulator TraJ
translation: MNEPAPKVQKASRKGSQRITVYCLPDEKKLIEENAKAAGKTASSFLLAVGQGYQVNGIVDAVQVREMARISGDLGRLGGLLKWWLTDDARVANFTPETIRAVLTKIEDTQVELGAVMSNVIRPRLGQNK
SIO_010081: STH12_RS21200
subclass of: SO_0000673
so part of: STH12_RS21200
location: complement(24691..25080)
location: region:24691-25080:-1
so has part: feature:24691-25080:-1:exon

WP_126169633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24691-25080:-1:exon

STH12_RS21205
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21205
old locus tag: STH12_04265
so part of: sequence
location: 25437..25757
location: region:25437-25757:1
so has part: feature:25437-25757:1:exon
subclass of: SO_0000010

position:25437:1
position: 25437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25757:1
position: 25757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25437-25757:1:exon

STH12_RS21205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21205
old locus tag: STH12_04265
inference: COORDINATES: protein motif:HMM:NF036299.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraK family protein
translation: MDKGVSGIDQWFASRTEKDKKRRKSGWVLFLAVSDEVFAALDSGYNMKVIHEYLTDQGKLQCSYDTFRGYVKKYKQKPIRPVAAAPAPNKPKKFEFNPKPQKSELI
SIO_010081: STH12_RS21205
subclass of: SO_0000673
so part of: STH12_RS21205
location: 25437..25757
location: region:25437-25757:1
so has part: feature:25437-25757:1:exon

WP_126169634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25437-25757:1:exon

STH12_RS21210
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21210
old locus tag: STH12_04266
so part of: sequence
location: 25767..26492
location: region:25767-26492:1
so has part: feature:25767-26492:1:exon
subclass of: SO_0000010

position:25767:1
position: 25767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26492:1
position: 26492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25767-26492:1:exon

STH12_RS21210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21210
old locus tag: STH12_04266
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011304098.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraL
translation: MSKIHIVLQGKGGVGKSLVASLIAQYKTAQLDKVTCIDTDPVNATFASYKELNVDTFKIIENDEINIRSFDALIERIAQTENDIIIDNGASSFVPLSNYIIQNGIADIIQELGHELIIHTIITGGQALSDTLNGFVSLVNQYPENCSFVVWLNPYWGAIEAEGKHFENMKAYTVNKEKVSAIIELPALKKETFGRDFEDMLRDKKTFNEAINDESLTIMNRQRLKMLKMDIFKLITAASII
SIO_010081: STH12_RS21210
subclass of: SO_0000673
so part of: STH12_RS21210
location: 25767..26492
location: region:25767-26492:1
so has part: feature:25767-26492:1:exon

WP_126169635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25767-26492:1:exon

STH12_RS21215
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21215
old locus tag: STH12_04267
so part of: sequence
location: 26489..26926
location: region:26489-26926:1
so has part: feature:26489-26926:1:exon
subclass of: SO_0000010

position:26489:1
position: 26489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26926:1
position: 26926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26489-26926:1:exon

STH12_RS21215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21215
old locus tag: STH12_04267
inference: COORDINATES: protein motif:HMM:NF023087.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraM
translation: MNKELEKVIQDIANIHNISIGRDDPILILYTMNELLLKRAAEIQENQLKVFHEEIQLSMKQLSEESKDKAEKVISAALNASRANIERATSEQIDSFNNQLTKSLIEFKTILSNENSKGMQLAKFSMISSVFTLAAAVILVAVSIT
SIO_010081: STH12_RS21215
subclass of: SO_0000673
so part of: STH12_RS21215
location: 26489..26926
location: region:26489-26926:1
so has part: feature:26489-26926:1:exon

WP_126169636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26489-26926:1:exon

STH12_RS21220
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21220
old locus tag: STH12_04268
so part of: sequence
location: complement(26950..27219)
location: region:26950-27219:-1
so has part: feature:26950-27219:-1:exon
subclass of: SO_0000010

position:26950:-1
position: 26950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27219:-1
position: 27219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26950-27219:-1:exon

STH12_RS21220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21220
old locus tag: STH12_04268
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012197997.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PapB/FocB family fimbrial expression transcriptional regulator
translation: MQNRRLIHRLIQGQVSDKQFQCLLRFTKFTSDRKIDALRAYLVLGHSKSMAYTANDLKDSKFDEALAVINEKWTIHQELIDATNESRAK
SIO_010081: STH12_RS21220
subclass of: SO_0000673
so part of: STH12_RS21220
location: complement(26950..27219)
location: region:26950-27219:-1
so has part: feature:26950-27219:-1:exon

WP_126169637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26950-27219:-1:exon

STH12_RS21230
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21230
old locus tag: STH12_04270
so part of: sequence
location: complement(27534..27926)
location: region:27534-27926:-1
so has part: feature:27534-27926:-1:exon
subclass of: SO_0000010

position:27534:-1
position: 27534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27926:-1
position: 27926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27534-27926:-1:exon

STH12_RS21230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21230
old locus tag: STH12_04270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011716472.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-NS family nucleoid-associated regulatory protein
translation: MNEFLEMLTHGRRLKAAVKDLPVEQLCKLLAKLETIIADREAEAEEELKANAERNARIEAIRKQMDEIGLSVEDLGLITAKSASKKRAPRPAKYKIVVDGQEVIWTGQGRTPTAFRNAVEGGAALEDFLI
SIO_010081: STH12_RS21230
subclass of: SO_0000673
so part of: STH12_RS21230
location: complement(27534..27926)
location: region:27534-27926:-1
so has part: feature:27534-27926:-1:exon

WP_126169639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27534-27926:-1:exon

STH12_RS21235
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21235
old locus tag: STH12_04271
so part of: sequence
location: complement(27954..28574)
location: region:27954-28574:-1
so has part: feature:27954-28574:-1:exon
subclass of: SO_0000010

position:27954:-1
position: 27954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28574:-1
position: 28574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27954-28574:-1:exon

STH12_RS21235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21235
old locus tag: STH12_04271
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010107508.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MKVARIYMRVSSESQDLERQERLVSDAKAKGYYVAGIYREKASGARADRPELLRMIADLQPNDVVIAEKLDRISRLPLLDAEKLIQSIKNRGAKLSIPGVVDLSELVDDSSGVAQIVLDAIQNLLLRLALQAARDDYEDRRERQRQGIEQAKEGGKFKGRKANVQLHSFIVALRKSGESISLTAQKAGCSKATVKRVWQTYLQTQS
SIO_010081: STH12_RS21235
subclass of: SO_0000673
so part of: STH12_RS21235
location: complement(27954..28574)
location: region:27954-28574:-1
so has part: feature:27954-28574:-1:exon

WP_126169640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27954-28574:-1:exon

STH12_RS21240
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21240
old locus tag: STH12_04272
so part of: sequence
location: complement(28725..28931)
location: region:28725-28931:-1
so has part: feature:28725-28931:-1:exon
subclass of: SO_0000010

position:28725:-1
position: 28725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28931:-1
position: 28931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28725-28931:-1:exon

STH12_RS21240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21240
old locus tag: STH12_04272
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MELNVLSDVLTLSLQDIEELLATTKQERSQGFIIDQQGQKSIIDVQRFDEVIGILQEAVAVKGNQEAN
SIO_010081: STH12_RS21240
subclass of: SO_0000673
so part of: STH12_RS21240
location: complement(28725..28931)
location: region:28725-28931:-1
so has part: feature:28725-28931:-1:exon

WP_126169641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28725-28931:-1:exon

STH12_RS21245
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21245
old locus tag: STH12_04273
so part of: sequence
location: complement(28937..30175)
location: region:28937-30175:-1
so has part: feature:28937-30175:-1:exon
subclass of: SO_0000010

position:28937:-1
position: 28937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30175:-1
position: 30175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28937-30175:-1:exon

STH12_RS21245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21245
old locus tag: STH12_04273
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010676177.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosyltransferase
translation: MNKLGIGERAPWDDFPEVIRNGDLGALKNEPEYVAAKSGNMPAAFELVHRLLIDETVEAIRERIGDCKPVVLPVLAVEASGNNKIPLAMAEVLADRLGLDVSLNIIQSVKVGRTDSGADHRLAFNPTFEGEVTQGQKYLIVDDTLTMGGTVASLRGYVENRGGKVVAAAVMTAHEGTLKLPVKISMLASIESKHSSGMNQFWLETFGYEIDKLTQGEAGHLKSAKSVDAIRERILAARHEGIERLGANRIEAPTSSRGEGRSGVKVEQNYQEMLAIYTEAKHRQVESVETRLVNLIDQQRMRLQQTQSSHPGFFSMPRTRNTWKLSLIQQKSRLQTLQSRLEIVIEIKEGIGLYSMRVEELATRKMRAQNPELADNWDSLQQAKRQHQAPIKKQEQELKQDKKKRGGRTLGR
SIO_010081: STH12_RS21245
subclass of: SO_0000673
so part of: STH12_RS21245
location: complement(28937..30175)
location: region:28937-30175:-1
so has part: feature:28937-30175:-1:exon

WP_126169642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28937-30175:-1:exon

STH12_RS21250
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21250
old locus tag: STH12_04274
so part of: sequence
location: complement(30207..30569)
location: region:30207-30569:-1
so has part: feature:30207-30569:-1:exon
subclass of: SO_0000010

position:30207:-1
position: 30207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30569:-1
position: 30569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30207-30569:-1:exon

STH12_RS21250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21250
old locus tag: STH12_04274
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198005.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNTRQKIVIGAEDDISLEAVLEKSVRIPQEPLSDRQLREIEAQSESMGFARRQNRKRSPYVIQKNIKIRVGMDELLAELGQAIGSKSDQETFDIAISKLVESVGSVRLTAMLENIAAKK
SIO_010081: STH12_RS21250
subclass of: SO_0000673
so part of: STH12_RS21250
location: complement(30207..30569)
location: region:30207-30569:-1
so has part: feature:30207-30569:-1:exon

WP_126169643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30207-30569:-1:exon

STH12_RS21255
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21255
old locus tag: STH12_04275
so part of: sequence
location: complement(30562..31254)
location: region:30562-31254:-1
so has part: feature:30562-31254:-1:exon
subclass of: SO_0000010

position:30562:-1
position: 30562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31254:-1
position: 31254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30562-31254:-1:exon

STH12_RS21255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21255
old locus tag: STH12_04275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198006.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MAVIAFAQSKGGAGKTTACVTLVGELCRQASLSNSDIKVTLIDTDPNQHSAGWAKKDGCPKNLVLIEKSNEETVLDDIDAASSTTQFVLVDLEGTANFAVTQAISRADLVIVPCQASEDDAAEAARTIGLIRKQGRLLGRKIPCCILLTRTSAAIQTRLLKLIKQDFIDNGVHILDSSLIDREAFRAVRSYGGIVNDLDPTLVSGIDKAASNAKAYANDVKRMLIGGSHD
SIO_010081: STH12_RS21255
subclass of: SO_0000673
so part of: STH12_RS21255
location: complement(30562..31254)
location: region:30562-31254:-1
so has part: feature:30562-31254:-1:exon

WP_126169644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30562-31254:-1:exon

STH12_RS21260
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21260
old locus tag: STH12_04276
so part of: sequence
location: 31526..31756
location: region:31526-31756:1
so has part: feature:31526-31756:1:exon
subclass of: SO_0000010

position:31526:1
position: 31526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31756:1
position: 31756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31526-31756:1:exon

STH12_RS21260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21260
old locus tag: STH12_04276
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015296894.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2188 domain-containing protein
translation: MSDNDYNVYQDTDGTWKGKRQDATRASVTGTTQKEVFERTRELAQKAQSEVSIHRGDNGQIRAKHSYGNDPKNTKG
SIO_010081: STH12_RS21260
subclass of: SO_0000673
so part of: STH12_RS21260
location: 31526..31756
location: region:31526-31756:1
so has part: feature:31526-31756:1:exon

WP_126169645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31526-31756:1:exon

STH12_RS21265
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21265
old locus tag: STH12_04278
so part of: sequence
location: complement(32191..32469)
location: region:32191-32469:-1
so has part: feature:32191-32469:-1:exon
subclass of: SO_0000010

position:32191:-1
position: 32191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32469:-1
position: 32469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32191-32469:-1:exon

STH12_RS21265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21265
old locus tag: STH12_04278
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEELIQTLRRYAKGRANDVERGLESPELSALLVEKYAVGMVDAVRALSLDIDINALTKEADLLCKWIDPQSVENRALRYSRVAKLDLSTER
SIO_010081: STH12_RS21265
subclass of: SO_0000673
so part of: STH12_RS21265
location: complement(32191..32469)
location: region:32191-32469:-1
so has part: feature:32191-32469:-1:exon

WP_126169646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32191-32469:-1:exon

STH12_RS21270
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21270
old locus tag: STH12_04279
so part of: sequence
location: complement(32485..32670)
location: region:32485-32670:-1
so has part: feature:32485-32670:-1:exon
subclass of: SO_0000010

position:32485:-1
position: 32485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32670:-1
position: 32670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32485-32670:-1:exon

STH12_RS21270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21270
old locus tag: STH12_04279
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSQTAVVSYQVATYSGEIEVSCHEDEDNSVIEARAKQRLTRQSGGSLPFGCCEFQVKERN
SIO_010081: STH12_RS21270
subclass of: SO_0000673
so part of: STH12_RS21270
location: complement(32485..32670)
location: region:32485-32670:-1
so has part: feature:32485-32670:-1:exon

WP_126169647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32485-32670:-1:exon

STH12_RS21275
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21275
old locus tag: STH12_04280
so part of: sequence
location: complement(32751..33071)
location: region:32751-33071:-1
so has part: feature:32751-33071:-1:exon
subclass of: SO_0000010

position:32751:-1
position: 32751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33071:-1
position: 33071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32751-33071:-1:exon

STH12_RS21275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21275
old locus tag: STH12_04280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVYSKKLNKEWREAFEEYERLCGFEPMYQDDIDAGVMTPQEAWSFNIQFLENVLSDITHIRTPDLEEQEIDDLISPMEEALENWNEMNGAKSHTVIIGKTQDGMS
SIO_010081: STH12_RS21275
subclass of: SO_0000673
so part of: STH12_RS21275
location: complement(32751..33071)
location: region:32751-33071:-1
so has part: feature:32751-33071:-1:exon

WP_126169648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32751-33071:-1:exon

STH12_RS21280
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21280
old locus tag: STH12_04281
so part of: sequence
location: complement(33082..33291)
location: region:33082-33291:-1
so has part: feature:33082-33291:-1:exon
subclass of: SO_0000010

position:33082:-1
position: 33082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33291:-1
position: 33291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33082-33291:-1:exon

STH12_RS21280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21280
old locus tag: STH12_04281
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKAKQLTEWQKGVLYAAAWMIEMTDQPGDAAELIISAGLEDADCSSLDDYEKERLREVKKSVGLKGLS
SIO_010081: STH12_RS21280
subclass of: SO_0000673
so part of: STH12_RS21280
location: complement(33082..33291)
location: region:33082-33291:-1
so has part: feature:33082-33291:-1:exon

WP_126169649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33082-33291:-1:exon

STH12_RS21285
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21285
old locus tag: STH12_04282
so part of: sequence
location: complement(33304..33546)
location: region:33304-33546:-1
so has part: feature:33304-33546:-1:exon
subclass of: SO_0000010

position:33304:-1
position: 33304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33546:-1
position: 33546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33304-33546:-1:exon

STH12_RS21285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21285
old locus tag: STH12_04282
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVDLSKSVDKANKAKAKAAKEMHKAATALRDWFRAEREAGRLHPNSQEGRDTRLTLARELEEFALFTEGQLESAQQRMTS
SIO_010081: STH12_RS21285
subclass of: SO_0000673
so part of: STH12_RS21285
location: complement(33304..33546)
location: region:33304-33546:-1
so has part: feature:33304-33546:-1:exon

WP_126169650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33304-33546:-1:exon

STH12_RS21290
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21290
old locus tag: STH12_04283
so part of: sequence
location: complement(33555..33785)
location: region:33555-33785:-1
so has part: feature:33555-33785:-1:exon
subclass of: SO_0000010

position:33555:-1
position: 33555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33785:-1
position: 33785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33555-33785:-1:exon

STH12_RS21290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21290
old locus tag: STH12_04283
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHAAALALFLLEQTGSVFGVWSGWMTAKAQRELFGQFLGKGIIIIDGERETICNRVKVCFGLDYDDRNVRQWRAL
SIO_010081: STH12_RS21290
subclass of: SO_0000673
so part of: STH12_RS21290
location: complement(33555..33785)
location: region:33555-33785:-1
so has part: feature:33555-33785:-1:exon

WP_126169651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33555-33785:-1:exon

STH12_RS21295
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21295
old locus tag: STH12_04284
so part of: sequence
location: complement(33860..34057)
location: region:33860-34057:-1
so has part: feature:33860-34057:-1:exon
subclass of: SO_0000010

position:33860:-1
position: 33860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34057:-1
position: 34057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33860-34057:-1:exon

STH12_RS21295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21295
old locus tag: STH12_04284
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010210453.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVDELKPVAPDDLKELIAKKGWSPELIAMRWGMTKRRVQQIIADTDRPRYYDDAINNLPLIVKK
SIO_010081: STH12_RS21295
subclass of: SO_0000673
so part of: STH12_RS21295
location: complement(33860..34057)
location: region:33860-34057:-1
so has part: feature:33860-34057:-1:exon

WP_219031569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33860-34057:-1:exon

STH12_RS21300
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21300
old locus tag: STH12_04285
so part of: sequence
location: complement(34090..34785)
location: region:34090-34785:-1
so has part: feature:34090-34785:-1:exon
subclass of: SO_0000010

position:34090:-1
position: 34090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34785:-1
position: 34785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34090-34785:-1:exon

STH12_RS21300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21300
old locus tag: STH12_04285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020308233.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MKYKPNPKPVSRQAASLRPGQFKHVLRVASVSGRQSVRDVMLLWLTHTTGIRVTELALIQIRDIMHPSGALRDEVYLRGAITKHGTPRVVYLTHPKAVAAVIAWLDYRISRGWQLGESGLFRGFVPSEKLVLTHKGRSFELARKRRVIESGPVEYLCCDALQQTISRIYRRAGIKGGSSHSGRRTLASRVLAQTGRIEDVQQVLGHIDVDHSWPYLDVDPKTIRRAFELAL
SIO_010081: STH12_RS21300
subclass of: SO_0000673
so part of: STH12_RS21300
location: complement(34090..34785)
location: region:34090-34785:-1
so has part: feature:34090-34785:-1:exon

WP_126169652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34090-34785:-1:exon

STH12_RS21305
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21305
old locus tag: STH12_04287
so part of: sequence
location: complement(35454..36200)
location: region:35454-36200:-1
so has part: feature:35454-36200:-1:exon
subclass of: SO_0000010

position:35454:-1
position: 35454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36200:-1
position: 36200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35454-36200:-1:exon

STH12_RS21305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21305
old locus tag: STH12_04287
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011839974.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQPHKKLTAADKSRLKRQRLRDQKRAAALAVRRNSAAVGANAFKASLEGFKLKKGKLPRYFNELINNARRLVYTRALEIDDGGVSRTISDRTKRKLFEITVTLLTTCDLVSGQVGKAKNIGFDPTSHDALMLAHAKRWGEAIPSSTWYRYIDVLKRAGVYNVQEVKKADEAGTVRSRAAYKWLSNQFLLAIGVYSDHIRSQIAASYQRAIANGLSFKWRVFKRQLPLNKRVTSDLFFDPVSDPPPLPH
SIO_010081: STH12_RS21305
subclass of: SO_0000673
so part of: STH12_RS21305
location: complement(35454..36200)
location: region:35454-36200:-1
so has part: feature:35454-36200:-1:exon

WP_126169653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35454-36200:-1:exon

STH12_RS21310
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21310
old locus tag: STH12_04288
so part of: sequence
location: complement(36936..37457)
location: region:36936-37457:-1
so has part: feature:36936-37457:-1:exon
subclass of: SO_0000010

position:36936:-1
position: 36936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37457:-1
position: 37457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36936-37457:-1:exon

STH12_RS21310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21310
old locus tag: STH12_04288
inference: COORDINATES: protein motif:HMM:NF016255.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ProQ/FINO family protein
translation: MSRPILSLKRKTTSQPPSFPPAPVPAVTPAGPSDNPPQTKAQRKHQAWLARQEQARLEKLARKAENKQKSERERQEFEEQVVQSRTFLATLGLKAPMAVGSGKELLARFRQEGFSHKASKRAIREWVTSREYLETVLAASVRFNLDGSVASEVSELEKKYTISKLKKLDARSI
SIO_010081: STH12_RS21310
subclass of: SO_0000673
so part of: STH12_RS21310
location: complement(36936..37457)
location: region:36936-37457:-1
so has part: feature:36936-37457:-1:exon

WP_126169654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36936-37457:-1:exon

STH12_RS21315
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21315
old locus tag: STH12_04290
so part of: sequence
location: 38084..38707
location: region:38084-38707:1
so has part: feature:38084-38707:1:exon
subclass of: SO_0000010

position:38084:1
position: 38084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38707:1
position: 38707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38084-38707:1:exon

STH12_RS21315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21315
old locus tag: STH12_04290
inference: COORDINATES: protein motif:HMM:NF020037.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MKRTFEHFQQSPIIATHHALLAVKDLSHQYIAASYGYADYAGQPVEQLIGLTDEDLLWQEQAADVIAHDLAVLCGDTSVRLFRFEHPNNSRRTFLLRYTVALPNNAGQLAGTHTLLLPLSDDELEQLTAPRLMHQVANLSKKEFVILSMLMNGVSRKAILEQENISISTYDTHLQRLKKKFRVSTTHELIIEVARRDLFPFPDTIYP
SIO_010081: STH12_RS21315
subclass of: SO_0000673
so part of: STH12_RS21315
location: 38084..38707
location: region:38084-38707:1
so has part: feature:38084-38707:1:exon

WP_126169655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38084-38707:1:exon

STH12_RS21325
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
gene: trbB
locus tag: STH12_RS21325
old locus tag: STH12_04293
so part of: sequence
location: 39630..40556
location: region:39630-40556:1
so has part: feature:39630-40556:1:exon
subclass of: SO_0000010

position:39630:1
position: 39630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40556:1
position: 40556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39630-40556:1:exon

STH12_RS21325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
gene: trbB
locus tag: STH12_RS21325
old locus tag: STH12_04293
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198008.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MESRLQSIKSHMGETLFAKLQDPNVIEIMLNPDGQLWVEQFGEPMCIFGSMQPAQASLFMKAVAGYHNVTISDEKSILECELPLDGSRFEGIYPPVTKNPAFTIRKKALKVFTLKNYIENNILTEHQYTTLLAAIRTHKNILIVGGTGSGKTTFANALIDTMVQNNPDERIVIMEDTNELQCTAPNSVILRSNEHTSINRLLRATLRLRPDRILVGEVRGGEALELLKGWNTGHPGGIATIHADSAAQGLHRLEDLLSEATPNVNKAMIASTINVVVFIKKHPSGRRIEEVIQVTGYESNQYQYQQLA
SIO_010081: STH12_RS21325
subclass of: SO_0000673
so part of: STH12_RS21325
location: 39630..40556
location: region:39630-40556:1
so has part: feature:39630-40556:1:exon

WP_126169657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39630-40556:1:exon

STH12_RS21330
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21330
old locus tag: STH12_04294
so part of: sequence
location: 40565..40888
location: region:40565-40888:1
so has part: feature:40565-40888:1:exon
subclass of: SO_0000010

position:40565:1
position: 40565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40888:1
position: 40888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40565-40888:1:exon

STH12_RS21330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21330
old locus tag: STH12_04294
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198009.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MNKTHLPGLVTISILLLMMMLPDMAYASSSTGMPWETPLSKIVASITGPVAFGISVLAIAASGATLIWGGEITNLIKTLVFIALVISVILFAVNILSSVFGISSTSI
SIO_010081: STH12_RS21330
subclass of: SO_0000673
so part of: STH12_RS21330
location: 40565..40888
location: region:40565-40888:1
so has part: feature:40565-40888:1:exon

WP_126169658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40565-40888:1:exon

STH12_RS21335
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
gene: trbD
locus tag: STH12_RS21335
old locus tag: STH12_04295
so part of: sequence
location: 40901..41194
location: region:40901-41194:1
so has part: feature:40901-41194:1:exon
subclass of: SO_0000010

position:40901:1
position: 40901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41194:1
position: 41194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40901-41194:1:exon

STH12_RS21335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
gene: trbD
locus tag: STH12_RS21335
old locus tag: STH12_04295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011505222.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbD
translation: MESQLNRAPIFHFNRSNLVLGGERKLVYGLFLVVLIFVVTLQTWFTFFIGVLLWIVVMPLLRMMANADPDMSRIFHRFTSYQAYYPPHAPKDYSRRT
SIO_010081: STH12_RS21335
subclass of: SO_0000673
so part of: STH12_RS21335
location: 40901..41194
location: region:40901-41194:1
so has part: feature:40901-41194:1:exon

WP_126169659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40901-41194:1:exon

STH12_RS21340
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21340
old locus tag: STH12_04296
so part of: sequence
location: 41197..43632
location: region:41197-43632:1
so has part: feature:41197-43632:1:exon
subclass of: SO_0000010

position:41197:1
position: 41197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43632:1
position: 43632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41197-43632:1:exon

STH12_RS21340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21340
old locus tag: STH12_04296
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198010.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbE
translation: MFKTASYRKSIKGMPDLLNYGILCDDGVLANKDGSLTAGFVFRGVDISSATIDERNHLAARISDLLVSFGTGWMIHVDAVRQTSPEYLSAEHSHFSHPVFAMIDAERQDYFSRVAERYESSYYLFVTYMPPSKSKAKIRDWMFEDNLQKKSLFAKNLENFNRKLRDVQSRLESYINIRRLSAYKLNGDDGSPYWYCELLQKINLMVTGIDRPVRLPFTPIGIDSLIGANELWTGLSPKLNKQYIAAISIDNFPDSSTPNILNHLDKLGFAYRWSTRYSFFDIFDAEKALEKERKTWSQKVISFKDQLMRNPNPKINQDAAQMVWQYEQALNDARSGKLKYGHFTPSIIVMNEDREYLEHCCELIEKTVQHLGFGCRVETVNAVETYLGSLPADSLHNIRRPLVSTINLADMLPMSSIWSGRITNPCPYYPPNSPAVMQCSAEGAAPFRLNLHVDDLGHFLVFGPPGTGKSTLLSTLAAQTNRYKGCKQYIFDKGRSAYAISQCGGAHYDICIDDTVTFAPLSHLRDDFAWCVNYIIKLLELRGVSVTARQRNLIEAGLKELAASDIENINIGEFLNIANDTEIIEALTFYTVGSAGNLLNSRADAFKSGTLQVFEIEELMNRGSEELIPVLLYIFRQIERSLDGSPGFIFLDEAWIAFSHPIFKAMLIEWLKVLRKANCVVGLFTQSLSDAIKSGILDVLIEACPTKIFLANHAADTDQIKPTYKSFGLNDRQIDIIKHATRKRHYYITSPEGNRLFDLALGELTLSFVGAGGKEDIARIKALVSDHKENWYKHWLVERNVLTESDIVESA
SIO_010081: STH12_RS21340
subclass of: SO_0000673
so part of: STH12_RS21340
location: 41197..43632
location: region:41197-43632:1
so has part: feature:41197-43632:1:exon

WP_126169660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41197-43632:1:exon

STH12_RS21345
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
gene: trbJ
locus tag: STH12_RS21345
old locus tag: STH12_04297
so part of: sequence
location: 43648..44406
location: region:43648-44406:1
so has part: feature:43648-44406:1:exon
subclass of: SO_0000010

position:43648:1
position: 43648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44406:1
position: 44406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43648-44406:1:exon

STH12_RS21345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
gene: trbJ
locus tag: STH12_RS21345
old locus tag: STH12_04297
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198011.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MKNKVLALSVALGVGAIAYWPSSNAWPVVCVNCGTEWTQIMNNIQLVQSYAEQIRQTLNQVKMINDQIKNTKALANGEWGNTFEQIERLAALARHGQSIAYSASDLAAEMDRRYKGYSHWQREISPQEYETHYQQLSQSMGDSAGSALKVANGIYQQRSENERVLNLIESRSQNATGRMEAIQAGNELSGQIIRQLQKIETLLSAQIQLTSTFVQAENEKEQLSKAQSSEFKKGDAPPLRSRELEPFTLKKF
SIO_010081: STH12_RS21345
subclass of: SO_0000673
so part of: STH12_RS21345
location: 43648..44406
location: region:43648-44406:1
so has part: feature:43648-44406:1:exon

WP_237158924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43648-44406:1:exon

STH12_RS21350
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
gene: trbL
locus tag: STH12_RS21350
old locus tag: STH12_04298
so part of: sequence
location: 44417..45775
location: region:44417-45775:1
so has part: feature:44417-45775:1:exon
subclass of: SO_0000010

position:44417:1
position: 44417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45775:1
position: 45775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44417-45775:1:exon

STH12_RS21350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
gene: trbL
locus tag: STH12_RS21350
old locus tag: STH12_04298
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198012.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MRLAITMFLLLLMPSAYAQGIPESGAINELLRTFETAAGQWPPILRQYATYVFVALVTISWAWTFFWMAFKEANFTELLAELTRRSLMIGFFYWLLMDGTWIAQQIVEGFQFLATALTGRHIHPSSIFDIGFSLASEIIKKLSWTQIGDSIGFVLAGLGILIVFAFITLEMLLVIIQYYIMLNLGVIMMGLLGHEWSREYAINYFRLMLGLGVKFLSMQMIVVLSMTVMQGWLQASSLTWTQVLVILPCVIVIWGLVREVPALAQSLISGSDSTTGNAMAGAMQAAATTAAIAAGAYAGAAAIGGAGVGGAANMGSLLRNSWAQANAADSDPATSQLPDGDSESGASSGSTGSSNASSELPRSHGNNSSSGNVDGGNVQGSISGSPSSSPPASGPPQSKLATAGKAAKIAGAAIAKETLSSAKNAFLAGLKRPIEARQDTVIGRAANSLKKE
SIO_010081: STH12_RS21350
subclass of: SO_0000673
so part of: STH12_RS21350
location: 44417..45775
location: region:44417-45775:1
so has part: feature:44417-45775:1:exon

WP_126169662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44417-45775:1:exon

STH12_RS21355
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21355
old locus tag: STH12_04299
so part of: sequence
location: 45783..46475
location: region:45783-46475:1
so has part: feature:45783-46475:1:exon
subclass of: SO_0000010

position:45783:1
position: 45783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46475:1
position: 46475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45783-46475:1:exon

STH12_RS21355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21355
old locus tag: STH12_04299
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198013.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB8/TrbF family protein
translation: MNNDQTPDTPADELTLLYQRARMEWDERLGNIVSLNQKLLTITVIALVIAVIAVGGVAYIGAQSKIEPYVLAMSDNNIVALQAAKSMPASEKKRLEISQLSAFVTHTRSVFTDINAQREYVIKAYAHLRNTDPAFIQVNHYLSVTAPPHIRAETEVVTVKIDNILPIGDNSATYQIEWTENVTDRQGNTKLPQHFKAAVEIYYEAPSTPQEFMGNPTGLWVKFFNVTERF
SIO_010081: STH12_RS21355
subclass of: SO_0000673
so part of: STH12_RS21355
location: 45783..46475
location: region:45783-46475:1
so has part: feature:45783-46475:1:exon

WP_126169663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45783-46475:1:exon

STH12_RS21360
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
gene: trbG
locus tag: STH12_RS21360
old locus tag: STH12_04300
so part of: sequence
location: 46475..47329
location: region:46475-47329:1
so has part: feature:46475-47329:1:exon
subclass of: SO_0000010

position:47329:1
position: 47329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46475-47329:1:exon

STH12_RS21360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
gene: trbG
locus tag: STH12_RS21360
old locus tag: STH12_04300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198014.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MKSVLFLLAISTPFAAAASLPALSAKENSAITLSKQWIDKPTTPITDGSGRVTYYFGDSLPSLVCAPIKTCVIELEEGEIIAQGGLQLGDSVRWKVSMAVSGAGTTKRTNLIVKPTDIALETTMTVVTDRRLYQIKLVSDPVRWMPYLSFSYPEQRQLEWETYQAAMAHHVQQNTLSDGAYIPELDFDYKVSGKTHFKPLRVYNDGVKTYIEMPSKVEQGNLPVILVVNGSQKELVNYRYQNGYTQNDGRKINGRFIVDQVSKELILTLGVGSEQESILVRHRR
SIO_010081: STH12_RS21360
subclass of: SO_0000673
so part of: STH12_RS21360
location: 46475..47329
location: region:46475-47329:1
so has part: feature:46475-47329:1:exon

WP_126169664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46475-47329:1:exon

STH12_RS21365
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21365
old locus tag: STH12_04301
so part of: sequence
location: 47334..47774
location: region:47334-47774:1
so has part: feature:47334-47774:1:exon
subclass of: SO_0000010

position:47334:1
position: 47334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47774:1
position: 47774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47334-47774:1:exon

STH12_RS21365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21365
old locus tag: STH12_04301
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198015.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLIVAVLLSILLSACATSDVNYYDFPVKTADQVTIANDLAWHIKERHGANAVFNFNYPMWSTSTPFSEHIETALRRLGIGVYVSEIPQGKHNELYYTLSKLNDQQFYIRVVVNDQLSFQRIWIYQDEQLFPLPTTTVFEGVSHRD
SIO_010081: STH12_RS21365
subclass of: SO_0000673
so part of: STH12_RS21365
location: 47334..47774
location: region:47334-47774:1
so has part: feature:47334-47774:1:exon

WP_126169665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47334-47774:1:exon

STH12_RS21370
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21370
old locus tag: STH12_04302
so part of: sequence
location: 47767..49068
location: region:47767-49068:1
so has part: feature:47767-49068:1:exon
subclass of: SO_0000010

position:47767:1
position: 47767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49068:1
position: 49068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47767-49068:1:exon

STH12_RS21370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21370
old locus tag: STH12_04302
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198016.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MTKVSAIGDPLKYHSGLSLKKSPIKIAFAFAGLLVLIVLYAIGTKGQQTQDMAPPKEEPTSAARKETNGAASIPPALQLSGQPSIPAAPPAQSQGDEDRGEFEVSGDDKHPLPPRRAPPPSLEEQQRVQQALRMADYRAQQHLAALTADTEVKLNETTQSVSLWGGEGGLGDSESRLRQAQEKVQSQQANLGSNPFMSSAMAADQMLPQIQQIDPNGQTRKEAFLAQNRSDDYLAFTRDVPLSAFELNVGTIIPAVLISGMNSDIPGALIAQVSQNVYDSATGKHLLIPIGAKLYGVYDSNVSYGQSRAVSAWTRINYPDGTRLNLAGMGGMDVEGYSGFEDQVDNHYWKTFGNAALLGMISGATQAGISEDNRNSDTKSAIADGVTQQFAQTGSTLIQKNLNVQPTIKIRPGYKFNIMVNKDIMLTPYSPSR
SIO_010081: STH12_RS21370
subclass of: SO_0000673
so part of: STH12_RS21370
location: 47767..49068
location: region:47767-49068:1
so has part: feature:47767-49068:1:exon

WP_126169666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47767-49068:1:exon

STH12_RS21375
type: Gene
subclass of: SO_0000704
RO_0002162: 1965282
locus tag: STH12_RS21375
old locus tag: STH12_04303
so part of: sequence
location: 49130..49888
location: region:49130-49888:1
so has part: feature:49130-49888:1:exon
subclass of: SO_0000010

position:49130:1
position: 49130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49888:1
position: 49888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49130-49888:1:exon

STH12_RS21375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1965282
locus tag: STH12_RS21375
old locus tag: STH12_04303
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198017.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKKLVLLLMAVHTASFAMQPKIENESATYSQDGIVISADVVRSSPQATPAPRNESPTIAHPTAQTVQSTPEATPAPVITHNLFIYPDESFYDAINRWLRADGYTTVAWSIDAEASEALAKHPQSVVSFAGSVRTALPTLSKQIGVPLYFSGSSSLAAIHQWHNRQVQIVLVNGLSLRDAVQKLAQDYGWNWNESNQSPSWLATNDYPFLTSYPIVTPQGDLARALGLVLDGFPVSAQLLDSTQTLFIVDTK
SIO_010081: STH12_RS21375
subclass of: SO_0000673
so part of: STH12_RS21375
location: 49130..49888
location: region:49130-49888:1
so has part: feature:49130-49888:1:exon

WP_237158925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49130-49888:1:exon