Campylobacter coli strain FDAARGOS_735 plasmid unnamed1, complete sequence.
type: Entry
definition: Campylobacter coli strain FDAARGOS_735 plasmid unnamed1, complete sequence.
sequence version: NZ_CP046318.1
sequence date: 2022-11-13
sequence: sequence
division: CON
label: NZ_CP046318.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN11056450
keyword: RefSeq
source: Campylobacter coli (Campylobacter hyoilei)
organism: Campylobacter coli
taxonomy: Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP046318.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: canu v. 1.4\nGenome Coverage :: 2259.03x\nSequencing Technology :: Pacbio; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/12/2022 23:13:13\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 1,778\nCDSs (total) :: 1,722\nGenes (coding) :: 1,694\nCDSs (with protein) :: 1,694\nGenes (RNA) :: 56\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 44\nncRNAs :: 3\nPseudo Genes (total) :: 28\nCDSs (without protein) :: 28\nPseudo Genes (ambiguous residues) :: 0 of 28\nPseudo Genes (frameshifted) :: 21 of 28\nPseudo Genes (incomplete) :: 3 of 28\nPseudo Genes (internal stop) :: 5 of 28\nPseudo Genes (multiple problems) :: 1 of 28\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 38104
topology: circular
so has quality: SO_0000988
location: 1..38104
location: region:1-38104:1
RO_0002162: 195

NZ_CP046318
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN11056450
type: BioSample
SIO_000068: biosample

1
title: FDA dAtabase for Regulatory Grade micrObial Sequences (FDA-ARGOS): Supporting development and validation of Infectious Disease Dx tests
author: Stonesifer, R.
author: Tallon, L.
author: Sadzewicz, L.
author: Vavikolanu, K.
author: Mehta, A.
author: Aluvathingal, J.
author: Nadendla, S.
author: Myers, T.
author: Yan, Y.
author: Sichtig, H.
journal: Unpublished

2
title: Direct Submission
author: Stonesifer, R.
author: Tallon, L.
author: Sadzewicz, L.
author: Vavikolanu, K.
author: Mehta, A.
author: Aluvathingal, J.
author: Nadendla, S.
author: Myers, T.
author: Yan, Y.
author: Sichtig, H.
journal: Submitted (21-NOV-2019) Center for Devices and Radiological Health, US Food and Drug Administration, 10903 New Hampshire Avenue, Silver Spring, MD 20993-0002, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38104:1
position: 38104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-38104:1:source
so part of: sequence
organism: Campylobacter coli
mol type: genomic DNA
strain: FDAARGOS_735
isolation source: gastrointestinal tract
host: Homo sapiens
culture collection: FDA:FDAARGOS_735
plasmid: unnamed1
country: USA: VA
collected by: BEI Resources/American Type and Culture Collection (ATCC)

195
type: Taxonomy
SIO_000068: taxonomy

FOC43_RS08580
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08580
old locus tag: FOC43_08580
so part of: sequence
location: complement(join(36537..38104,1..898))
location: region:1-38104:-1
so has part: feature:1-898:-1:exon
so has part: feature:36537-38104:-1:exon
subclass of: SO_0000010

66545217
type: Gene
SIO_000068: ncbigene

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38104:-1
position: 38104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-898:-1:exon

position:898:-1
position: 898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:36537-38104:-1:exon

position:36537:-1
position: 36537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FOC43_RS08580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08580
old locus tag: FOC43_08580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002823507.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome recycling factor
translation: MLALKEFRSKAKAFPDILNYASFIDEGILLNKDGSLTAGFYYRAGDISSMTINERNTLSARINSVLKTLGNGWAVHIDCSRIKTENYIDGDTFYKSNIAQILENERKHYFDNVEHFENLFTMIFTYLPPHKSINKITDLMIIDETKNKNQGDKILEYFKNTLQKLEDSLSNYIKIERMLPRIAIDEYNNEYILDDMLEYINFCICGERQKIILPNAPMFLDCLLGGRHFETGMHPRIDSQYIGIIAIEGFPSESYPNILNALTELNFDYRFNTRFIFLDDFEAQNSLNKYRKKWQQKTKGWLDQLLDRPARKQDDHAVLMVQELDSALAESKSGMIGYGYYTANIVVFDRDYESLEYKLKDIRKVLENLGFLSRTETINSVEAYLGTLPGFVYPNLRRPILNTLNLTHLIPLASIWAGEKYNPSDKFPPNSPPLMQVVTSGNTPFRLNLHVSDLGHTLIFGPTGSGKSTLLANIFLSFQKYKNAKIYAFDKGQSLLAPTLATGGIHYNIAGDHSSLAFAPLANIKTEAEIAWAEFWIETCLKLQNVNITPKQKKLIHEALISHINTKSTSLTEFVSALQDNDLRDALSYYTISGTGGFLFDSEEDKLSLSNITTFEIEELMSLGDQYIVPALLYIFNRIERGLDGSPTLLIIDEAWIALKHSAFKDKIVNWLKVLRKANVAVVMATQSLSDSAKSGILDVLQESCPTKIFLPNSDAFKKGTETTLAPYDFYKIFGLNDVQIGIIANAIPKREYYYTSPLGTRLFNLALGKTNLAFTGISDKIGVKRVNQLYEKHKEEWAYKWLEEKEINYKRFDNSQKEQI
SIO_010081: FOC43_RS08580
subclass of: SO_0000673
so part of: FOC43_RS08580
location: complement(join(36537..38104,1..898))
location: region:1-38104:-1
so has part: feature:1-898:-1:exon
so has part: feature:36537-38104:-1:exon

WP_002779816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:36537-38104:-1:exon

FOC43_RS08585
type: Gene
subclass of: SO_0000704
RO_0002162: 195
gene: trbD
locus tag: FOC43_RS08585
old locus tag: FOC43_08585
so part of: sequence
location: complement(902..1189)
location: region:902-1189:-1
so has part: feature:902-1189:-1:exon
subclass of: SO_0000010

66545218
type: Gene
SIO_000068: ncbigene

position:902:-1
position: 902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189:-1
position: 1189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902-1189:-1:exon

FOC43_RS08585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
gene: trbD
locus tag: FOC43_RS08585
old locus tag: FOC43_08585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002838104.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbD
translation: MEELQRIDIYSALNKPNLIFGADRELILMVGVISFALIFTGATLLTSIIGIFLFFFCNMLLRLMAKSDPLMRQIFLRQIKYKKFYYAQSTPFSKD
SIO_010081: FOC43_RS08585
subclass of: SO_0000673
so part of: FOC43_RS08585
location: complement(902..1189)
location: region:902-1189:-1
so has part: feature:902-1189:-1:exon

WP_002779817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:902-1189:-1:exon

FOC43_RS08590
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08590
old locus tag: FOC43_08590
so part of: sequence
location: complement(1189..1485)
location: region:1189-1485:-1
so has part: feature:1189-1485:-1:exon
subclass of: SO_0000010

66545219
type: Gene
SIO_000068: ncbigene

position:1485:-1
position: 1485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1189-1485:-1:exon

FOC43_RS08590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08590
old locus tag: FOC43_08590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002784998.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MKKFLILFLALGLGYALASTTGAGLPWEGPLEQIKASLSGPVAFIMSILAIIGAGAGLIWGNEFSGFIKTLFYIVIVIALIIGANSFMSLFSTSGALI
SIO_010081: FOC43_RS08590
subclass of: SO_0000673
so part of: FOC43_RS08590
location: complement(1189..1485)
location: region:1189-1485:-1
so has part: feature:1189-1485:-1:exon

WP_002779818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1189-1485:-1:exon

FOC43_RS08595
type: Gene
subclass of: SO_0000704
RO_0002162: 195
gene: trbB
locus tag: FOC43_RS08595
old locus tag: FOC43_08595
so part of: sequence
location: complement(1495..2433)
location: region:1495-2433:-1
so has part: feature:1495-2433:-1:exon
subclass of: SO_0000010

66545220
type: Gene
SIO_000068: ncbigene

position:1495:-1
position: 1495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2433:-1
position: 2433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1495-2433:-1:exon

FOC43_RS08595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
gene: trbB
locus tag: FOC43_RS08595
old locus tag: FOC43_08595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002792775.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MSNIEFQARINEKIKREFGDILVHLEDKETIELMLNSDGKLWLEKLGQDMICLGDFSEAKAKSIITAVSTLLDTTTNAENPILECELPLDGSRFEALLPPIVAKPTFTIRKKAVKIFTLGDYVGSNIITPNQKEVLINAIIERQNILVVGGTGSGKTTFSNAIIDGISKITPDHRIVIIEDTAELQCASENKVILRATDKVDMLRLLKATMRLRPDRIIVGETRGKEALDLLKAWNTGHPGGIATIHANSANGGLTRMEQLISEATNAKMSKLIAEAVDLIVFISKSKEGRKVKEIIKVIGYENDKYITQAI
SIO_010081: FOC43_RS08595
subclass of: SO_0000673
so part of: FOC43_RS08595
location: complement(1495..2433)
location: region:1495-2433:-1
so has part: feature:1495-2433:-1:exon

WP_002779819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1495-2433:-1:exon

FOC43_RS08600
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08600
old locus tag: FOC43_08600
so part of: sequence
location: complement(2841..3254)
location: region:2841-3254:-1
so has part: feature:2841-3254:-1:exon
subclass of: SO_0000010

66545221
type: Gene
SIO_000068: ncbigene

position:2841:-1
position: 2841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3254:-1
position: 3254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2841-3254:-1:exon

FOC43_RS08600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08600
old locus tag: FOC43_08600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002840246.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MKKVYLDTNIFLDYFNAERTYHNEAKQLIYFLITNNIQIVFSEDMISTIAYLIKKENLNNFTHFLKDISLEKDFNIASFGASVINMACDYYDKYRGDFEDYLQYFCAEKEGCCAIYTMDKNFPNLKIPVKRYGEIDI
SIO_010081: FOC43_RS08600
subclass of: SO_0000673
so part of: FOC43_RS08600
location: complement(2841..3254)
location: region:2841-3254:-1
so has part: feature:2841-3254:-1:exon

WP_002779821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2841-3254:-1:exon

FOC43_RS08605
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08605
old locus tag: FOC43_08605
so part of: sequence
location: complement(3257..4171)
location: region:3257-4171:-1
so has part: feature:3257-4171:-1:exon
subclass of: SO_0000010

66545222
type: Gene
SIO_000068: ncbigene

position:3257:-1
position: 3257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4171:-1
position: 4171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3257-4171:-1:exon

FOC43_RS08605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08605
old locus tag: FOC43_08605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002840249.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNEIEIKDLNEINKNNKQQVVYRKDNLSTDCITGEVIERNQIIVRKVQTRESFIKLFTENIHYIINLEPQEKTLFFTLLSSVDYKNVVRFDKSMKQNIILDKVLSRAGMYRALNGLIEKKVIFKIDRDFVKSYAGVGSDDCYLFNPNLVGRGSWNDLKNLRHTITREWDFENLEVRENLEIEEEYLGLDEIKNNQKQYQVKEINQEHDETTKVKNTEIVIEEKNNSANNQYSFDKKEEPSINKKVLISNDTQPSLFDENQKEQEARLFIEKYAGILTGGFDPTKSAKELKREKLDKDLEEGRI
SIO_010081: FOC43_RS08605
subclass of: SO_0000673
so part of: FOC43_RS08605
location: complement(3257..4171)
location: region:3257-4171:-1
so has part: feature:3257-4171:-1:exon

WP_002779822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3257-4171:-1:exon

FOC43_RS08610
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08610
old locus tag: FOC43_08610
so part of: sequence
location: 5118..5318
location: region:5118-5318:1
so has part: feature:5118-5318:1:exon
subclass of: SO_0000010

66545223
type: Gene
SIO_000068: ncbigene

position:5118:1
position: 5118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5318:1
position: 5318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5118-5318:1:exon

FOC43_RS08610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08610
old locus tag: FOC43_08610
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKSKKERIEKLSEKTKNLNLDNELYIFVNNIKWGKKANILINCVDLGTNIEFYPKSQQENSYFFK
SIO_010081: FOC43_RS08610
subclass of: SO_0000673
so part of: FOC43_RS08610
location: 5118..5318
location: region:5118-5318:1
so has part: feature:5118-5318:1:exon

WP_155820420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5118-5318:1:exon

FOC43_RS08615
type: Gene
subclass of: SO_0000704
RO_0002162: 195
gene: tnpA
locus tag: FOC43_RS08615
old locus tag: FOC43_08615
so part of: sequence
location: 5429..5896
location: region:5429-5896:1
so has part: feature:5429-5896:1:exon
subclass of: SO_0000010

66545224
type: Gene
SIO_000068: ncbigene

position:5429:1
position: 5429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5896:1
position: 5896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5429-5896:1:exon

FOC43_RS08615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
gene: tnpA
locus tag: FOC43_RS08615
old locus tag: FOC43_08615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012289817.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MNIEYDKNLHSVFLLQYHFILVVKYRKKVINNKICDRLKDIFENIAKGQTYQLKIIEFNHDLDHLHILFKAKPKSELLKFINAYKSASSRLIKKEFPEIKKYLWKEYFWSGSYFLATTGGVTLEILKQYVQNQGLEDNRVKKGYNSKKKRLLNNG
SIO_010081: FOC43_RS08615
subclass of: SO_0000673
so part of: FOC43_RS08615
location: 5429..5896
location: region:5429-5896:1
so has part: feature:5429-5896:1:exon

WP_072214055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5429-5896:1:exon

FOC43_RS08620
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08620
old locus tag: FOC43_08620
so part of: sequence
location: 5898..7148
location: region:5898-7148:1
so has part: feature:5898-7148:1:exon
subclass of: SO_0000010

66545225
type: Gene
SIO_000068: ncbigene

position:5898:1
position: 5898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7148:1
position: 7148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5898-7148:1:exon

FOC43_RS08620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08620
old locus tag: FOC43_08620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002784330.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-guided endonuclease TnpB family protein
translation: MLITKGFKYRIYPNKEQQKLLNHQCFIYNQAYNIILDLQKETYEQNKDKDKKDKTYLKASEIDLKVKLALKQRELHFKSVVAQQARINANRALEQAIKDKNKGFPKFKNSKMAKQSFNWNNQGYQIKDSDNSKFKIFHLMKMPLKMRYHRDLPNNYKINQITISKSHNKYFVSFSITYTKPNVSLISTSNLDIKKAVGVDLNINEYALSSGELIKTNSKLLAKAKYDKAFKRLQRKQSKRILKAKKEKIKLGVNFKKTQTRLNKIYEKASNIKKDLQHKISKEIVDKFDLIVVENLKTKNMTKRAKLKNIKAKSGLNKSILDTSFYQFLSFLEYKALHNGKLFTKINPQYTSKTCNKCGSIKTNLTLKDRVYICDECGNEIHRDINAANNILERGLKSFGLGISLLDYKQKAFLIS
SIO_010081: FOC43_RS08620
subclass of: SO_0000673
so part of: FOC43_RS08620
location: 5898..7148
location: region:5898-7148:1
so has part: feature:5898-7148:1:exon

WP_032685593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5898-7148:1:exon

FOC43_RS08625
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08625
old locus tag: FOC43_08625
so part of: sequence
location: complement(7199..7522)
location: region:7199-7522:-1
so has part: feature:7199-7522:-1:exon
subclass of: SO_0000010

66545226
type: Gene
SIO_000068: ncbigene

position:7199:-1
position: 7199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7522:-1
position: 7522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7199-7522:-1:exon

FOC43_RS08625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08625
old locus tag: FOC43_08625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002783722.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRGFAKIEFFANLEYLKQEYNKGYVVSKILYEKAKQDKNISMVYSQFNKYFNEVFKNKIEKKEITQENNQSLALENKEPIKLKINTKSKKVFDAKFGKDIKEDDLL
SIO_010081: FOC43_RS08625
subclass of: SO_0000673
so part of: FOC43_RS08625
location: complement(7199..7522)
location: region:7199-7522:-1
so has part: feature:7199-7522:-1:exon

WP_002790618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7199-7522:-1:exon

FOC43_RS08630
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08630
old locus tag: FOC43_08630
so part of: sequence
location: 7712..8080
location: region:7712-8080:1
so has part: feature:7712-8080:1:exon
subclass of: SO_0000010

66545227
type: Gene
SIO_000068: ncbigene

position:7712:1
position: 7712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8080:1
position: 8080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7712-8080:1:exon

FOC43_RS08630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08630
old locus tag: FOC43_08630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002838516.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKTKQVNIRLTLEEYNLLTEKAQSHGLTLSRYLRDLSMNYPITCIVDQKVAHNVLNIAGDIGRLGGLFKHWLVRNEDNKVNFSNKRTYNDIDEIVDQILDLQILLKEQAKRIIQNDNQKDS
SIO_010081: FOC43_RS08630
subclass of: SO_0000673
so part of: FOC43_RS08630
location: 7712..8080
location: region:7712-8080:1
so has part: feature:7712-8080:1:exon

WP_002779826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7712-8080:1:exon

FOC43_RS08635
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08635
old locus tag: FOC43_08635
so part of: sequence
location: 8058..10214
location: region:8058-10214:1
so has part: feature:8058-10214:1:exon
subclass of: SO_0000010

66545228
type: Gene
SIO_000068: ncbigene

position:8058:1
position: 8058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10214:1
position: 10214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8058-10214:1:exon

FOC43_RS08635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08635
old locus tag: FOC43_08635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002804092.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraI/MobA(P) family conjugative relaxase
translation: MIIKKIPSKKQNKSSFKNLSNYILDKDNNNAKVLVDYMLDKNNEMDKVEGYHFTNCSFDNDEDNINEIINTQKLNTTTKQDKTLHLVVSFQEDEKPTLEILQAIEEEIAKSLGMNDHQRLSVIHSNTNNLHIHIAINKVNPRTLKVVNPYNDVKILQETAMKLEKQYNLKLDNHISQKDKQSNKYNIHTMNCNFETWVKEKVSKQVDLMLKDEKTTFKDIKQLLAKYDLEFRERRKGFVIASKSEKLFCKASSIHRGLSKQALEKRFKELDLKQEKENTQNIKEEKHEIKEQYQRPNKETSKTLWEKYLRIENEKKAELDKELRMLKLRRNEFKTSIPSMKFNKNTFAHVKNQRMIFKNKQKELYQKYKRVSYRDFLISESLSGNEEATRALRRTKTKINENENTLSSTQEKPKIFENVDYITKEGYAVYKSGFNKAIDKGEMLKVSLINDKDDKEFLLNSLLMAIDRFGNHLNITGDDKFKRNILEVANDYNLNVSFSDQRMQKIQEENNNKRQEMKTRKVLKNIIELKIKLTEQDKDIDENIKEKELKALKFSLKKISNSTPSIFKGELKKLGFSYKEIDSMDTESVCIEIDGFIVNSANKEGLIAMNEEIKQTLIDDEEIKRFEKFEHLFLNTNKITDIAKGFYTNRKIDADEYIKRFSMQESKISKVANAISMLSDKNIEIMEKYVKKLEKDLKYQYLKKAEVIESNDINLNNF
SIO_010081: FOC43_RS08635
subclass of: SO_0000673
so part of: FOC43_RS08635
location: 8058..10214
location: region:8058-10214:1
so has part: feature:8058-10214:1:exon

WP_002779827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8058-10214:1:exon

FOC43_RS08640
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08640
old locus tag: FOC43_08640
so part of: sequence
location: complement(10253..10477)
location: region:10253-10477:-1
so has part: feature:10253-10477:-1:exon
subclass of: SO_0000010

66545229
type: Gene
SIO_000068: ncbigene

position:10253:-1
position: 10253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10477:-1
position: 10477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10253-10477:-1:exon

FOC43_RS08640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08640
old locus tag: FOC43_08640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002779829.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGFKKLSSEAPKKENDFVNSARGETGNTKTGNTKRNKKLMINFTEEEYQILNQESNSMGLSLNSYVRFKIFRKD
SIO_010081: FOC43_RS08640
subclass of: SO_0000673
so part of: FOC43_RS08640
location: complement(10253..10477)
location: region:10253-10477:-1
so has part: feature:10253-10477:-1:exon

WP_002779829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10253-10477:-1:exon

FOC43_RS08645
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08645
old locus tag: FOC43_08645
so part of: sequence
location: complement(10480..11166)
location: region:10480-11166:-1
so has part: feature:10480-11166:-1:exon
subclass of: SO_0000010

66545230
type: Gene
SIO_000068: ncbigene

position:10480:-1
position: 10480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11166:-1
position: 11166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10480-11166:-1:exon

FOC43_RS08645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08645
old locus tag: FOC43_08645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002823899.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIISVVNEKGGSGKTTLAVNLSARLAEDGDNVLLIDADPQKSTEVFSDMRSQSNLEPLFSNVSKTGVSLGDEIKRMKNAFDSIIVDTGGRDSKEMRKAILSSNIIIIPTIPSQYDVNVLDHMLEIYNEVIEINPNLLALVLVNRVSPNPFLAKELENLKEYINEAKKEKGLDKVIMLESVIYERQAYRKAVIEGKSMKEFCDKNDKALNDFENFYQELLKIANEKLGV
SIO_010081: FOC43_RS08645
subclass of: SO_0000673
so part of: FOC43_RS08645
location: complement(10480..11166)
location: region:10480-11166:-1
so has part: feature:10480-11166:-1:exon

WP_002779831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10480-11166:-1:exon

FOC43_RS08650
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08650
old locus tag: FOC43_08650
so part of: sequence
location: complement(11214..11609)
location: region:11214-11609:-1
so has part: feature:11214-11609:-1:exon
subclass of: SO_0000010

66545231
type: Gene
SIO_000068: ncbigene

position:11214:-1
position: 11214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11609:-1
position: 11609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11214-11609:-1:exon

FOC43_RS08650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08650
old locus tag: FOC43_08650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002782959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraM
translation: MNKKELIEEIAKKHHIILDENDPILAVVSANEIIFDDFLEKIDLLFTKHKTDLESYKFNIFNEIREYSKSNQEILKDILTQAQTNQNTTKPPQEKTEDTKEKKNTNINFLIIAIASQIIFLLVGLIIGITI
SIO_010081: FOC43_RS08650
subclass of: SO_0000673
so part of: FOC43_RS08650
location: complement(11214..11609)
location: region:11214-11609:-1
so has part: feature:11214-11609:-1:exon

WP_002779833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11214-11609:-1:exon

FOC43_RS08655
type: Gene
subclass of: SO_0000704
RO_0002162: 195
gene: lepB
locus tag: FOC43_RS08655
old locus tag: FOC43_08655
so part of: sequence
location: complement(11673..12140)
location: region:11673-12140:-1
so has part: feature:11673-12140:-1:exon
subclass of: SO_0000010

66545232
type: Gene
SIO_000068: ncbigene

position:11673:-1
position: 11673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12140:-1
position: 12140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11673-12140:-1:exon

FOC43_RS08655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
gene: lepB
locus tag: FOC43_RS08655
old locus tag: FOC43_08655
EC number: 3.4.21.89
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002782960.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase I
translation: MRKAIAIFAFSFAFLLILSYLIFYFGGFHFNYTRSMPLGLYKEINSSTLNKNDIVLLKIPQKKEILLKKIIAVNGDFVEVNKQGVFINKILMPDSKIFSFDSKGNPLEFKPFKHTLKENELFVMGENIKSYDSRYFGVINILQNEVKKVKIVILF
SIO_010081: FOC43_RS08655
subclass of: SO_0000673
so part of: FOC43_RS08655
location: complement(11673..12140)
location: region:11673-12140:-1
so has part: feature:11673-12140:-1:exon

WP_002779834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11673-12140:-1:exon

FOC43_RS08660
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08660
old locus tag: FOC43_08660
so part of: sequence
location: complement(12145..12828)
location: region:12145-12828:-1
so has part: feature:12145-12828:-1:exon
subclass of: SO_0000010

66545233
type: Gene
SIO_000068: ncbigene

position:12145:-1
position: 12145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12828:-1
position: 12828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12145-12828:-1:exon

FOC43_RS08660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08660
old locus tag: FOC43_08660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002779836.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MIDKVLKFLDDGIPKNDFDRQLLASNLVGATNLIELNKKERIITLQAAKKLELNPIKGNFDYQHLKDIHKALFKDVYTWAGKDRMEVGLHGNFGKYAPNGAIINFVPGKELDKYSKIIFDELAKNNYLKNSKDLNHFAKNLAKFMGEINALHPFREGNGRTQRIFLNELAKNAGYKLDLNLISKHKMIHACVEASQLKPGRLEALIKDNLKNFRQNLDLEQNKGMSL
SIO_010081: FOC43_RS08660
subclass of: SO_0000673
so part of: FOC43_RS08660
location: complement(12145..12828)
location: region:12145-12828:-1
so has part: feature:12145-12828:-1:exon

WP_002779836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12145-12828:-1:exon

FOC43_RS08665
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08665
old locus tag: FOC43_08665
so part of: sequence
location: complement(12821..13063)
location: region:12821-13063:-1
so has part: feature:12821-13063:-1:exon
subclass of: SO_0000010

66545234
type: Gene
SIO_000068: ncbigene

position:12821:-1
position: 12821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13063:-1
position: 13063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12821-13063:-1:exon

FOC43_RS08665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08665
old locus tag: FOC43_08665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002804094.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKQYPEVYSLEESLAILKKYKDDLTKEQYEQNKSIICGFAIENMFANEEDIINLIKVDKQEKTPDEIIAEYKKEWGVND
SIO_010081: FOC43_RS08665
subclass of: SO_0000673
so part of: FOC43_RS08665
location: complement(12821..13063)
location: region:12821-13063:-1
so has part: feature:12821-13063:-1:exon

WP_002779838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12821-13063:-1:exon

FOC43_RS08670
type: Gene
subclass of: SO_0000704
RO_0002162: 195
gene: tnpA
locus tag: FOC43_RS08670
old locus tag: FOC43_08670
so part of: sequence
location: 13307..13774
location: region:13307-13774:1
so has part: feature:13307-13774:1:exon
subclass of: SO_0000010

66545235
type: Gene
SIO_000068: ncbigene

position:13307:1
position: 13307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13774:1
position: 13774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13307-13774:1:exon

FOC43_RS08670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
gene: tnpA
locus tag: FOC43_RS08670
old locus tag: FOC43_08670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012289817.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MNIEYDKNLHSVFLLQYHFILVVKYRKKVINNKICDRLKDIFENIAKGQTYQLKIIEFNHDLDHLHILFKAKPKSELLKFINAYKSASSRLIKKEFPEIKKYLWKEYFWSGSYFLATTGGVTLEILKQYVQNQGLEDNRVKKGYNSKKKRLLNNG
SIO_010081: FOC43_RS08670
subclass of: SO_0000673
so part of: FOC43_RS08670
location: 13307..13774
location: region:13307-13774:1
so has part: feature:13307-13774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13307-13774:1:exon

FOC43_RS08675
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08675
old locus tag: FOC43_08675
so part of: sequence
location: 13776..15026
location: region:13776-15026:1
so has part: feature:13776-15026:1:exon
subclass of: SO_0000010

66545236
type: Gene
SIO_000068: ncbigene

position:13776:1
position: 13776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15026:1
position: 15026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13776-15026:1:exon

FOC43_RS08675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08675
old locus tag: FOC43_08675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002784330.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-guided endonuclease TnpB family protein
translation: MLITKGFKYRIYPNKEQQKLLNHQCFIYNQAYNIILDLQKETYEQNKDKDKKDKTYLKASEIDLKVKLALKQRELHFKSVVAQQARINANRALEQAIKDKNKGFPKFKNSKMAKQSFNWNNQGYQIKDSDNSKFKIFHLMKMPLKMRYHRDLPNNYKINQITISKSHNKYFVSFSITYTKPNVSLISTSNLDIKKAVGVDLNINEYALSSGELIKTNSKLLAKAKYDKAFKRLQRKQSKRILKAKKEKIKLGVNFKKTQTRLNKIYEKASNIKKDLQHKISKEIVDKFDLIVVENLKTKNMTKRAKLKNIKAKSGLNKSILDTSFYQFLSFLEYKALHNGKLFTKINPQYTSKTCNKCGSIKTNLTLKDRVYICDECGNEIHRDINAANNILERGLKSFGLGISLLDYKQKAFLIS
SIO_010081: FOC43_RS08675
subclass of: SO_0000673
so part of: FOC43_RS08675
location: 13776..15026
location: region:13776-15026:1
so has part: feature:13776-15026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13776-15026:1:exon

FOC43_RS08680
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08680
old locus tag: FOC43_08680
so part of: sequence
location: complement(15077..15400)
location: region:15077-15400:-1
so has part: feature:15077-15400:-1:exon
subclass of: SO_0000010

66545237
type: Gene
SIO_000068: ncbigene

position:15077:-1
position: 15077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15400:-1
position: 15400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15077-15400:-1:exon

FOC43_RS08680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08680
old locus tag: FOC43_08680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002783722.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRGFAKIEFFANLEYLKQEYNKGYVVSKILYEKAKQDKNISMVYSQFNKYFNEVFKNKIEKKEITQENNQSLALENKEPIKLKINTKSKKVFDAKFGKDIKEDDLL
SIO_010081: FOC43_RS08680
subclass of: SO_0000673
so part of: FOC43_RS08680
location: complement(15077..15400)
location: region:15077-15400:-1
so has part: feature:15077-15400:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15077-15400:-1:exon

FOC43_RS08685
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08685
old locus tag: FOC43_08685
so part of: sequence
location: 15590..15958
location: region:15590-15958:1
so has part: feature:15590-15958:1:exon
subclass of: SO_0000010

66545238
type: Gene
SIO_000068: ncbigene

position:15590:1
position: 15590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15958:1
position: 15958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15590-15958:1:exon

FOC43_RS08685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08685
old locus tag: FOC43_08685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002838516.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKTKQVNIRLTLEEYNLLTEKAQSHGLTLSRYLRDLSMNYPITCIVDQKVAHNVLNIAGDIGRLGGLFKHWLVRNEDNKVNFSNKRTYNDIDEIVDQILDLQILLKEQAKRIIQNDNQKDS
SIO_010081: FOC43_RS08685
subclass of: SO_0000673
so part of: FOC43_RS08685
location: 15590..15958
location: region:15590-15958:1
so has part: feature:15590-15958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15590-15958:1:exon

FOC43_RS08690
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08690
old locus tag: FOC43_08690
so part of: sequence
location: 15936..18092
location: region:15936-18092:1
so has part: feature:15936-18092:1:exon
subclass of: SO_0000010

66545239
type: Gene
SIO_000068: ncbigene

position:15936:1
position: 15936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18092:1
position: 18092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15936-18092:1:exon

FOC43_RS08690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08690
old locus tag: FOC43_08690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002804092.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraI/MobA(P) family conjugative relaxase
translation: MIIKKIPSKKQNKSSFKNLSNYILDKDNNNAKVLVDYMLDKNNEMDKVEGYHFTNCSFDNDEDNINEIINTQKLNTTTKQDKTLHLVVSFQEDEKPTLEILQAIEEEIAKSLGMNDHQRLSVIHSNTNNLHIHIAINKVNPRTLKVVNPYNDVKILQETAMKLEKQYNLKLDNHISQKDKQSNKYNIHTMNCNFETWVKEKVSKQVDLMLKDEKTTFKDIKQLLAKYDLEFRERRKGFVIASKSEKLFCKASSIHRGLSKQALEKRFKELDLKQEKENTQNIKEEKHEIKEQYQRPNKETSKTLWEKYLRIENEKKAELDKELRMLKLRRNEFKTSIPSMKFNKNTFAHVKNQRMIFKNKQKELYQKYKRVSYRDFLISESLSGNEEATRALRRTKTKINENENTLSSTQEKPKIFENVDYITKEGYAVYKSGFNKAIDKGEMLKVSLINDKDDKEFLLNSLLMAIDRFGNHLNITGDDKFKRNILEVANDYNLNVSFSDQRMQKIQEENNNKRQEMKTRKVLKNIIELKIKLTEQDKDIDENIKEKELKALKFSLKKISNSTPSIFKGELKKLGFSYKEIDSMDTESVCIEIDGFIVNSANKEGLIAMNEEIKQTLIDDEEIKRFEKFEHLFLNTNKITDIAKGFYTNRKIDADEYIKRFSMQESKISKVANAISMLSDKNIEIMEKYVKKLEKDLKYQYLKKAEVIESNDINLNNF
SIO_010081: FOC43_RS08690
subclass of: SO_0000673
so part of: FOC43_RS08690
location: 15936..18092
location: region:15936-18092:1
so has part: feature:15936-18092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15936-18092:1:exon

FOC43_RS08695
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08695
old locus tag: FOC43_08695
so part of: sequence
location: complement(18131..18355)
location: region:18131-18355:-1
so has part: feature:18131-18355:-1:exon
subclass of: SO_0000010

66545240
type: Gene
SIO_000068: ncbigene

position:18131:-1
position: 18131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18355:-1
position: 18355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18131-18355:-1:exon

FOC43_RS08695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08695
old locus tag: FOC43_08695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002779829.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGFKKLSSEAPKKENDFVNSARGETGNTKTGNTKRNKKLMINFTEEEYQILNQESNSMGLSLNSYVRFKIFRKD
SIO_010081: FOC43_RS08695
subclass of: SO_0000673
so part of: FOC43_RS08695
location: complement(18131..18355)
location: region:18131-18355:-1
so has part: feature:18131-18355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18131-18355:-1:exon

FOC43_RS08700
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08700
old locus tag: FOC43_08700
so part of: sequence
location: complement(18358..19044)
location: region:18358-19044:-1
so has part: feature:18358-19044:-1:exon
subclass of: SO_0000010

66545241
type: Gene
SIO_000068: ncbigene

position:18358:-1
position: 18358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19044:-1
position: 19044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18358-19044:-1:exon

FOC43_RS08700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08700
old locus tag: FOC43_08700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002823899.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIISVVNEKGGSGKTTLAVNLSARLAEDGDNVLLIDADPQKSTEVFSDMRSQSNLEPLFSNVSKTGVSLGDEIKRMKNAFDSIIVDTGGRDSKEMRKAILSSNIIIIPTIPSQYDVNVLDHMLEIYNEVIEINPNLLALVLVNRVSPNPFLAKELENLKEYINEAKKEKGLDKVIMLESVIYERQAYRKAVIEGKSMKEFCDKNDKALNDFENFYQELLKIANEKLGV
SIO_010081: FOC43_RS08700
subclass of: SO_0000673
so part of: FOC43_RS08700
location: complement(18358..19044)
location: region:18358-19044:-1
so has part: feature:18358-19044:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18358-19044:-1:exon

FOC43_RS08705
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08705
old locus tag: FOC43_08705
so part of: sequence
location: complement(19092..19487)
location: region:19092-19487:-1
so has part: feature:19092-19487:-1:exon
subclass of: SO_0000010

66545242
type: Gene
SIO_000068: ncbigene

position:19092:-1
position: 19092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19487:-1
position: 19487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19092-19487:-1:exon

FOC43_RS08705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08705
old locus tag: FOC43_08705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002782959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraM
translation: MNKKELIEEIAKKHHIILDENDPILAVVSANEIIFDDFLEKIDLLFTKHKTDLESYKFNIFNEIREYSKSNQEILKDILTQAQTNQNTTKPPQEKTEDTKEKKNTNINFLIIAIASQIIFLLVGLIIGITI
SIO_010081: FOC43_RS08705
subclass of: SO_0000673
so part of: FOC43_RS08705
location: complement(19092..19487)
location: region:19092-19487:-1
so has part: feature:19092-19487:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19092-19487:-1:exon

FOC43_RS08710
type: Gene
subclass of: SO_0000704
RO_0002162: 195
gene: lepB
locus tag: FOC43_RS08710
old locus tag: FOC43_08710
so part of: sequence
location: complement(19551..20018)
location: region:19551-20018:-1
so has part: feature:19551-20018:-1:exon
subclass of: SO_0000010

66545243
type: Gene
SIO_000068: ncbigene

position:19551:-1
position: 19551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20018:-1
position: 20018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19551-20018:-1:exon

FOC43_RS08710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
gene: lepB
locus tag: FOC43_RS08710
old locus tag: FOC43_08710
EC number: 3.4.21.89
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002782960.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase I
translation: MRKAIAIFAFSFAFLLILSYLIFYFGGFHFNYTRSMPLGLYKEINSSTLNKNDIVLLKIPQKKEILLKKIIAVNGDFVEVNKQGVFINKILMPDSKIFSFDSKGNPLEFKPFKHTLKENELFVMGENIKSYDSRYFGVINILQNEVKKVKIVILF
SIO_010081: FOC43_RS08710
subclass of: SO_0000673
so part of: FOC43_RS08710
location: complement(19551..20018)
location: region:19551-20018:-1
so has part: feature:19551-20018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19551-20018:-1:exon

FOC43_RS08715
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08715
old locus tag: FOC43_08715
so part of: sequence
location: complement(20023..20706)
location: region:20023-20706:-1
so has part: feature:20023-20706:-1:exon
subclass of: SO_0000010

66545244
type: Gene
SIO_000068: ncbigene

position:20023:-1
position: 20023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20706:-1
position: 20706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20023-20706:-1:exon

FOC43_RS08715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08715
old locus tag: FOC43_08715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002779836.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MIDKVLKFLDDGIPKNDFDRQLLASNLVGATNLIELNKKERIITLQAAKKLELNPIKGNFDYQHLKDIHKALFKDVYTWAGKDRMEVGLHGNFGKYAPNGAIINFVPGKELDKYSKIIFDELAKNNYLKNSKDLNHFAKNLAKFMGEINALHPFREGNGRTQRIFLNELAKNAGYKLDLNLISKHKMIHACVEASQLKPGRLEALIKDNLKNFRQNLDLEQNKGMSL
SIO_010081: FOC43_RS08715
subclass of: SO_0000673
so part of: FOC43_RS08715
location: complement(20023..20706)
location: region:20023-20706:-1
so has part: feature:20023-20706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20023-20706:-1:exon

FOC43_RS08720
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08720
old locus tag: FOC43_08720
so part of: sequence
location: complement(20699..20941)
location: region:20699-20941:-1
so has part: feature:20699-20941:-1:exon
subclass of: SO_0000010

66545245
type: Gene
SIO_000068: ncbigene

position:20699:-1
position: 20699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20941:-1
position: 20941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20699-20941:-1:exon

FOC43_RS08720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08720
old locus tag: FOC43_08720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002804094.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKQYPEVYSLEESLAILKKYKDDLTKEQYEQNKSIICGFAIENMFANEEDIINLIKVDKQEKTPDEIIAEYKKEWGVND
SIO_010081: FOC43_RS08720
subclass of: SO_0000673
so part of: FOC43_RS08720
location: complement(20699..20941)
location: region:20699-20941:-1
so has part: feature:20699-20941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20699-20941:-1:exon

FOC43_RS08725
type: Gene
subclass of: SO_0000704
RO_0002162: 195
gene: tnpA
locus tag: FOC43_RS08725
old locus tag: FOC43_08725
so part of: sequence
location: 21185..21640
location: region:21185-21640:1
so has part: feature:21185-21640:1:exon
subclass of: SO_0000010

66545246
type: Gene
SIO_000068: ncbigene

position:21185:1
position: 21185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21640:1
position: 21640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21185-21640:1:exon

FOC43_RS08725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
gene: tnpA
locus tag: FOC43_RS08725
old locus tag: FOC43_08725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_048813205.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MNIEYDKNLHSVFLLQYHFILVVKYRKKVINNKICDRLKDIFENIAKGQTYQLKIIEFNHDLDHLHILFKAKPKSELLKFINAYKSASSRLIKKEFPEIKKYLWKEYFWSGSYFLATTGGVTLEILKQYVQNQGLEDNRVKKGYNSKKRGF
SIO_010081: FOC43_RS08725
subclass of: SO_0000673
so part of: FOC43_RS08725
location: 21185..21640
location: region:21185-21640:1
so has part: feature:21185-21640:1:exon

WP_155820423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21185-21640:1:exon

FOC43_RS08730
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08730
old locus tag: FOC43_08730
so part of: sequence
location: 21653..22903
location: region:21653-22903:1
so has part: feature:21653-22903:1:exon
subclass of: SO_0000010

66545247
type: Gene
SIO_000068: ncbigene

position:21653:1
position: 21653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22903:1
position: 22903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21653-22903:1:exon

FOC43_RS08730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08730
old locus tag: FOC43_08730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002784330.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-guided endonuclease TnpB family protein
translation: MLITKGFKYRIYPNKEQQKLLNHQCFIYNQAYNIILDLQKETYEQNKDKDKKDKTYLKASEIDLKVKLALKQRELHFKSVVAQQARINANRALEQAIKDKNKGFPKFKNSKMAKQSFNWNNQGYQIKDSDNSKFKIFHLMKMPLKMRYHRDLPNNYKINQITISKSHNKYFVSFSITYTKPNVSLISTSNLDIKKAVGVDLNINEYALSSGELIKTNSKLLAKAKYDKAFKRLQRKQSKRILKAKKEKIKLGVNFKKTQTRLNKIYEKASNIKKDLQHKISKEIVDKFDLIVVENLKTKNMTKRAKLKNIKAKSGLNKSILDTSFYQFLSFLEYKALHNGKLFTKINPQYTSKTCNKCGSIKTNLTLKDRVYICDECGNEIHRDINAANNILERGLKSFGLGISLLDYKQKAFLIS
SIO_010081: FOC43_RS08730
subclass of: SO_0000673
so part of: FOC43_RS08730
location: 21653..22903
location: region:21653-22903:1
so has part: feature:21653-22903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21653-22903:1:exon

FOC43_RS08735
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08735
old locus tag: FOC43_08735
so part of: sequence
location: complement(22954..23673)
location: region:22954-23673:-1
so has part: feature:22954-23673:-1:exon
subclass of: SO_0000010

66545248
type: Gene
SIO_000068: ncbigene

position:22954:-1
position: 22954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23673:-1
position: 23673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22954-23673:-1:exon

FOC43_RS08735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08735
old locus tag: FOC43_08735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002814348.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraL
translation: MAKIHFVLNGKGGIGKSFISSLLCQYFLDKGESIVAIDTDPNNTTLLNVKALKAKFLQLIDDDGKFDVRAFDKIVELAFEKKAENYIIDSGATTFIPLIDYLKENEVLDFLTNNNLEVYMHVPIVGGQARDDTILGLTQLTEAFNCSFVVWINEYHGSIIKDNLEFEETKEYQAIKEKIKAIVYLNALSKDTFGKDLLELTSKNLTFGEAMQDKSFSLMSKQRLKIFKDKAFSQISNIL
SIO_010081: FOC43_RS08735
subclass of: SO_0000673
so part of: FOC43_RS08735
location: complement(22954..23673)
location: region:22954-23673:-1
so has part: feature:22954-23673:-1:exon

WP_002784845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22954-23673:-1:exon

FOC43_RS08740
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08740
old locus tag: FOC43_08740
so part of: sequence
location: complement(23684..25507)
location: region:23684-25507:-1
so has part: feature:23684-25507:-1:exon
subclass of: SO_0000010

66545249
type: Gene
SIO_000068: ncbigene

position:23684:-1
position: 23684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25507:-1
position: 25507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23684-25507:-1:exon

FOC43_RS08740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08740
old locus tag: FOC43_08740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002824096.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MKKQTNQTLVYILAITGILIAFIIISQIATQYLAKSFNYSPSLGETLLYGFYNPFKWISWSYTYYSFYPDFFKKFFMVMFAGIAFCFIVFILVKLAFLRKAKAIENLHGSAHWATLEEVKESGVFDKDKGVYIGGFEHKKTLHYLRHDGPEHVMLFAPTRSGKGVSLLLPTLLSWEESALIFDIKGELWALTAGWRQKYAKNKVLKLDPTCLDDSAVKFNILEEIRLETMHEIKDTQNIAINLIFKGETPPTNPTQGSTAYFKSEAANFLVSIILYALYLKKIQGKNPPNLTDIYKFINDPNQSIDELLEEMVECDISTMDKNTQEIIQSISRSMKNKATQELSGVIGTASETLNLYIDPILAKNTAKSDFKIKDLMNYESPISLYLIIPPGQKDRLRPFFNLLINQIFRTLTDDSLNFKNGENIKRYKHKMLVLADELTMFGKLGVLEENLAYMAGYGMKFYGSIQDIQQLYSIYGEKETIISNCHIRIAFAPNKIETAKLLSEMGGITTIIKKSLTSSGKRTAVMLGNVSETIQEVQRPLITADECMRLPSAKKDKDDKIIAPGDMLIFIAGQAPIYGKQILYFKDPAFLARSKVTLDKQVSDIL
SIO_010081: FOC43_RS08740
subclass of: SO_0000673
so part of: FOC43_RS08740
location: complement(23684..25507)
location: region:23684-25507:-1
so has part: feature:23684-25507:-1:exon

WP_002779800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23684-25507:-1:exon

FOC43_RS08745
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08745
old locus tag: FOC43_08745
so part of: sequence
location: complement(25504..27717)
location: region:25504-27717:-1
so has part: feature:25504-27717:-1:exon
subclass of: SO_0000010

66545250
type: Gene
SIO_000068: ncbigene

position:25504:-1
position: 25504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27717:-1
position: 27717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25504-27717:-1:exon

FOC43_RS08745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08745
old locus tag: FOC43_08745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002846006.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MKNKDFIQETADKIIESLKNGTAPWIKPWKGIDLANNMPYNPITNKPYNGINSINLMLQNYNDPRWLTYKQAQSINAQVRKGEKSTLIQYWQFSEMVDKLDEEGNVITNENGEVEQIEVKLENPKVFFAYVFNAEQIENMPKLEQKQEIDNFQIIKEAQKILDDSKAIIHHKGNRAFYNAANDTITLPPKENFLSEGAYYTTALHELGHWSGHESRLNRDLKNPFGSKEYAKEELRAEIASFLFNGKIGLDYDPGQHLSYIDSWVQILEDKPNEIFKATSDATKIVNFIESLSLEQKQKIELENSNTQNQALKQDKELNLATRKTYLYVPFEEKEFAKKAGAKWDKEAKMWYAPKGADLKNFTQWLNQSPLTQSYNNTHDEFKAFLEKYELNIEGQPIMDGKLHRVSVIGDKGREKSGAYVGFLNGHPAGFVQNYKTGIKENWKSANSLENTKNKEINLQNALEHNKALKEQRDKELNQAYENTAVKLENEYNNARWANSEHPYLKEKGFDKNFYLKQDKNGNLLIPLRDIDGKYWATQRIFANGDKMIGATRTAEEKEQGIEYPAKKQGNFFLLGAKNLNNVNEVYICEGFATSASVYEATKSPTIMGVDAGNLEIIVTNIKEKYPKMNIIIAGDNDVKKELNGNKNVGKETALGIQKKYPEVKVVLPNFTNQEAQKGLSDFNDLMKSRGLEEIKKQLKEQIAKQLMVEKATTKALDKNKGINKEITAKKDIGISL
SIO_010081: FOC43_RS08745
subclass of: SO_0000673
so part of: FOC43_RS08745
location: complement(25504..27717)
location: region:25504-27717:-1
so has part: feature:25504-27717:-1:exon

WP_002779801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25504-27717:-1:exon

FOC43_RS08915
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08915
so part of: sequence
location: complement(27722..27862)
location: region:27722-27862:-1
so has part: feature:27722-27862:-1:exon
subclass of: SO_0000010

66545284
type: Gene
SIO_000068: ncbigene

position:27722:-1
position: 27722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27862:-1
position: 27862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27722-27862:-1:exon

FOC43_RS08915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002844662.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDFKELETIPNFSYEVDPLTAEELGAFKENALSEDDAKEGTEDQG
SIO_010081: FOC43_RS08915
subclass of: SO_0000673
so part of: FOC43_RS08915
location: complement(27722..27862)
location: region:27722-27862:-1
so has part: feature:27722-27862:-1:exon

WP_002779802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27722-27862:-1:exon

FOC43_RS08750
type: Gene
subclass of: SO_0000704
RO_0002162: 195
gene: ssb
locus tag: FOC43_RS08750
old locus tag: FOC43_08750
so part of: sequence
location: complement(27849..28211)
location: region:27849-28211:-1
so has part: feature:27849-28211:-1:exon
subclass of: SO_0000010

66545251
type: Gene
SIO_000068: ncbigene

position:27849:-1
position: 27849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28211:-1
position: 28211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27849-28211:-1:exon

FOC43_RS08750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
gene: ssb
locus tag: FOC43_RS08750
old locus tag: FOC43_08750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002907809.1
GO function: GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MINNITIGGRLTADAELRHCNQGSIICTFTLANNRKYKEIENSTYIEVSLFGSFANAMHPYLKKGISVDVVGELTQDTWEHEGKIYSKHRIKAKEIDFRTPKKEKQTIPNIEEGENYEGF
SIO_010081: FOC43_RS08750
subclass of: SO_0000673
so part of: FOC43_RS08750
location: complement(27849..28211)
location: region:27849-28211:-1
so has part: feature:27849-28211:-1:exon

WP_002779803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27849-28211:-1:exon

FOC43_RS08755
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08755
old locus tag: FOC43_08755
so part of: sequence
location: complement(28308..28853)
location: region:28308-28853:-1
so has part: feature:28308-28853:-1:exon
subclass of: SO_0000010

66545252
type: Gene
SIO_000068: ncbigene

position:28308:-1
position: 28308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28853:-1
position: 28853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28308-28853:-1:exon

FOC43_RS08755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08755
old locus tag: FOC43_08755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002846004.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MIDIALIEQCKNPNVETQIIQKIIQVESNNQQFAININKVGSFILKNKKEAENLANNFIKGGYSVDIGLMQFNSNNLKSSTFSHYSVEDLLDTCKNIKAGSDIFYLAYEMTNKNLAKEDRINQALSIYNTGDLKKGFSNGYVAKYDSTAKTIDDLEEKARKSDTRIKITYNLFNLQTQKKE
SIO_010081: FOC43_RS08755
subclass of: SO_0000673
so part of: FOC43_RS08755
location: complement(28308..28853)
location: region:28308-28853:-1
so has part: feature:28308-28853:-1:exon

WP_002779804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28308-28853:-1:exon

FOC43_RS08760
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08760
old locus tag: FOC43_08760
so part of: sequence
location: complement(28846..30087)
location: region:28846-30087:-1
so has part: feature:28846-30087:-1:exon
subclass of: SO_0000010

66545253
type: Gene
SIO_000068: ncbigene

position:28846:-1
position: 28846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30087:-1
position: 30087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28846-30087:-1:exon

FOC43_RS08760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08760
old locus tag: FOC43_08760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002797794.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MLEVNMSPNKFLPKNNKRLSKVPIIIIFAIIAIVLFSIFYVALSRKQNLERQTAQTTPKEETQIATNHNNDLNLYIDELQVQKAQENNIISPPMPNATQQPIQETNSQTTQQPPNNTPILVQNNAIDEKEMKIKKDMQLKALLSNTKLDIKTEATDSKKNQAINFNPPNNNEDINLGAINPQNTGLGLESGTNKDVQGQQFLSQKKDNGYLKYVKQKPLSTYEIKAGWNIPAILITGVNSDLPGQILAQVTQNVYDSATGKYLLIPQGTKVVGAYSSNIIYGQSRLLVAWNKLIFPNGDTLNLDGMQGASQDGYTGFEDQVDNHYFRIFGSAFLLSSISAGIALSDNSDTNSEKETASDKAIAQAIQQMGQVASEMIRKNMNISPTLKIRPGYKFNIFVTKDIILEPLELNND
SIO_010081: FOC43_RS08760
subclass of: SO_0000673
so part of: FOC43_RS08760
location: complement(28846..30087)
location: region:28846-30087:-1
so has part: feature:28846-30087:-1:exon

WP_002779805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28846-30087:-1:exon

FOC43_RS08765
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08765
old locus tag: FOC43_08765
so part of: sequence
location: complement(30091..30534)
location: region:30091-30534:-1
so has part: feature:30091-30534:-1:exon
subclass of: SO_0000010

66545254
type: Gene
SIO_000068: ncbigene

position:30091:-1
position: 30091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30534:-1
position: 30534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30091-30534:-1:exon

FOC43_RS08765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08765
old locus tag: FOC43_08765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002779806.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKILFLALIAFFITSCAKMNSDYFNSSFAVEETKINYNKIADDFSQFIISYYAPNKTTFFINEDKNNQDFSNYFINTLRKKGYAISNDNSKKDLTFLSYQISQIDNENIVAIFNINESKINVIYKIIENKLVKPNITSFNFTPKTKG
SIO_010081: FOC43_RS08765
subclass of: SO_0000673
so part of: FOC43_RS08765
location: complement(30091..30534)
location: region:30091-30534:-1
so has part: feature:30091-30534:-1:exon

WP_002779806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30091-30534:-1:exon

FOC43_RS08770
type: Gene
subclass of: SO_0000704
RO_0002162: 195
gene: trbG
locus tag: FOC43_RS08770
old locus tag: FOC43_08770
so part of: sequence
location: complement(30531..31691)
location: region:30531-31691:-1
so has part: feature:30531-31691:-1:exon
subclass of: SO_0000010

66545255
type: Gene
SIO_000068: ncbigene

position:30531:-1
position: 30531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31691:-1
position: 31691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30531-31691:-1:exon

FOC43_RS08770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
gene: trbG
locus tag: FOC43_RS08770
old locus tag: FOC43_08770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002841939.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MKKFIFNTNTATREIHHTPTSGARLKSLDYNYTKEYNYNYDEFYGIHLSSFRGLDFRHKGADLVANTPKNYTQKLKKLSLIASLLLFIGSSAYANNLNERDFANLTPKEKKDLAIAQKWINSKTTTIQGNNGEVIFLFGESMPSIVTAPLRLTDIALEPGEVIKDVQIGDSIRWAVSLSISGEEPYLISHIIVKPTDKNLQTTMNIMTNKRVYRLNLISEAKKFMPAVSFNYPNSIIKTLEDYKNQMKAKSEAKNFYKTKDDEIPSNIENLDFGYSIEGNAPFKPLRIYNDGIKTYIQMPKNLKFYEAPALMVLDSSNEKQIVNYRLKYDTFIVDRLFNKAILLSNVGSKQEKITITKHSNKANQDIVNNVLYDLSLQNKNKKENK
SIO_010081: FOC43_RS08770
subclass of: SO_0000673
so part of: FOC43_RS08770
location: complement(30531..31691)
location: region:30531-31691:-1
so has part: feature:30531-31691:-1:exon

WP_173937789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30531-31691:-1:exon

FOC43_RS08775
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08775
old locus tag: FOC43_08775
so part of: sequence
location: complement(31702..32397)
location: region:31702-32397:-1
so has part: feature:31702-32397:-1:exon
subclass of: SO_0000010

66545256
type: Gene
SIO_000068: ncbigene

position:31702:-1
position: 31702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32397:-1
position: 32397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31702-32397:-1:exon

FOC43_RS08775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08775
old locus tag: FOC43_08775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002907783.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB8/TrbF family protein
translation: MNIFRQKQKIEKNEFDTSSNPYLNAKTEWLERYGDYITRAKNWQMVAIISLAMCFVCVLFIGYIGSQNKLIPYVIEVDKLGNTAKVGMVQNIDLKNPNVIKYSLNTFIYSWRSVWGNAETQRKFIFDAYAYVEPRSKAFNYLNSEFQKNNPFTRSTKENVRVKIKNIVPQNIDTWQVEWEETTTNLNEDILSKETYRGLIQIKQIIPNTEEQILKNPLGIFITDINFAKIL
SIO_010081: FOC43_RS08775
subclass of: SO_0000673
so part of: FOC43_RS08775
location: complement(31702..32397)
location: region:31702-32397:-1
so has part: feature:31702-32397:-1:exon

WP_002779808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31702-32397:-1:exon

FOC43_RS08780
type: Gene
subclass of: SO_0000704
RO_0002162: 195
gene: trbL
locus tag: FOC43_RS08780
old locus tag: FOC43_08780
so part of: sequence
location: complement(32418..33605)
location: region:32418-33605:-1
so has part: feature:32418-33605:-1:exon
subclass of: SO_0000010

66545257
type: Gene
SIO_000068: ncbigene

position:32418:-1
position: 32418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33605:-1
position: 33605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32418-33605:-1:exon

FOC43_RS08780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
gene: trbL
locus tag: FOC43_RS08780
old locus tag: FOC43_08780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002838802.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MNGSKLALVLFLCFLIPNLAFGAESPEGALTLIKNGLLSWTPLIKTACLWVFWTLVAIDLIWTFGLKALSGFEFGEFLTTLIKKIIYIGIFLFLFNTDQWLQIIFNSFSQLATNVNNGIDVKPNNIISTAIDVVITILQSASIFSPVQSFFIAISGIIILISFLLMAIDLLIVYLKFFLMNVIVFFALALGGLNHFKQIGLNPIMTAIKVGVELFMIQGLMGICFTMIGAIANEINQNITIENILIALVTPVIFCIITKMIPGIIEAVFNGSIGESAGAAAGFRAVATMAAGAAVGAAAGAVGITRAMNAAKALHLAEGGKGGMDLVKGVAKNLASAGAEHLRDNLTKGRMPNQMANRLQEKLKDIQGKTSEGGISSGSPKEESYQSGINPNITK
SIO_010081: FOC43_RS08780
subclass of: SO_0000673
so part of: FOC43_RS08780
location: complement(32418..33605)
location: region:32418-33605:-1
so has part: feature:32418-33605:-1:exon

WP_002779809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32418-33605:-1:exon

FOC43_RS08785
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08785
old locus tag: FOC43_08785
so part of: sequence
location: complement(33592..33855)
location: region:33592-33855:-1
so has part: feature:33592-33855:-1:exon
subclass of: SO_0000010

66545258
type: Gene
SIO_000068: ncbigene

position:33592:-1
position: 33592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33855:-1
position: 33855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33592-33855:-1:exon

FOC43_RS08785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08785
old locus tag: FOC43_08785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019109042.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EexN family lipoprotein
translation: MKHFIFSGLIGLGALAFLAGCGDEAKTSDYYKAHLDEAKARVAECKKMEKMNETQQRDCSNANEAVLFQRDKNNKFYQSSPEAFEWK
SIO_010081: FOC43_RS08785
subclass of: SO_0000673
so part of: FOC43_RS08785
location: complement(33592..33855)
location: region:33592-33855:-1
so has part: feature:33592-33855:-1:exon

WP_002779810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33592-33855:-1:exon

FOC43_RS08790
type: Gene
subclass of: SO_0000704
RO_0002162: 195
gene: trbJ
locus tag: FOC43_RS08790
old locus tag: FOC43_08790
so part of: sequence
location: complement(33904..34692)
location: region:33904-34692:-1
so has part: feature:33904-34692:-1:exon
subclass of: SO_0000010

66545259
type: Gene
SIO_000068: ncbigene

position:33904:-1
position: 33904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34692:-1
position: 34692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33904-34692:-1:exon

FOC43_RS08790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
gene: trbJ
locus tag: FOC43_RS08790
old locus tag: FOC43_08790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002842176.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MKKSLFGVKKATSTIIATLLIGTNNAFAGGIPVIDLSAIANQVKDYAMQLQQYEQMYSQLQQQIQMVQMQKQNLERLTKEDWDNLGTVLYQTRNVMNKVNGISYDIGNVSRKFEDTYKDFEGYSNDLENATNESERNKIYSDRYKQIAETNQNTFNGTLQQLELRYQDLESEDALIAKLKQNSQNSNGNLQAVQATNDLLAYQIDEIRKLRSVIMDQSNMLTNYLASQNNKQILEQAKMEKLFQRNKNNNFYQSNSDAFKWK
SIO_010081: FOC43_RS08790
subclass of: SO_0000673
so part of: FOC43_RS08790
location: complement(33904..34692)
location: region:33904-34692:-1
so has part: feature:33904-34692:-1:exon

WP_002779811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33904-34692:-1:exon

FOC43_RS08795
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08795
old locus tag: FOC43_08795
so part of: sequence
location: complement(35279..35857)
location: region:35279-35857:-1
so has part: feature:35279-35857:-1:exon
subclass of: SO_0000010

66545260
type: Gene
SIO_000068: ncbigene

position:35279:-1
position: 35279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35857:-1
position: 35857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35279-35857:-1:exon

FOC43_RS08795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08795
old locus tag: FOC43_08795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002815581.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rha family transcriptional regulator
translation: MSNTSIININNQEVVFENKDEQVFCTSLDVAKVFGKQHKHILELIGEKFNNNEIKNFCEPNFRLSFKTRKIEGFRGRERKYPYYQLTKDGFSFITMGLTGRKADKFKIAFINAFNEMERIIKNQYTPKLENYNKYKIPNTPYRENIIKAIMQTEQNRNCEFEELIAYEIKEIYKDNKSHIEQKINFKVKGLI
SIO_010081: FOC43_RS08795
subclass of: SO_0000673
so part of: FOC43_RS08795
location: complement(35279..35857)
location: region:35279-35857:-1
so has part: feature:35279-35857:-1:exon

WP_032685585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35279-35857:-1:exon

FOC43_RS08800
type: Gene
subclass of: SO_0000704
RO_0002162: 195
locus tag: FOC43_RS08800
old locus tag: FOC43_08800
so part of: sequence
location: complement(35869..36540)
location: region:35869-36540:-1
so has part: feature:35869-36540:-1:exon
subclass of: SO_0000010

66545261
type: Gene
SIO_000068: ncbigene

position:35869:-1
position: 35869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36540:-1
position: 36540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35869-36540:-1:exon

FOC43_RS08800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 195
locus tag: FOC43_RS08800
old locus tag: FOC43_08800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002779815.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbM/KikA/MpfK family conjugal transfer protein
translation: MKNFIFGVKKITLALSATLLISSNAFADDILTGDTKLACEAILCLSSGTRPSECSSSLARYFSIKFKKPWKTINARRAFLNLCPIQNDANIEDLVLNNLVDDVLPVSDPRQCTPNYLNTQVETKRSYSTFGIMSYRINPNMPNFCHALINHAYTDYKTPKYKCTGEFYNSLEWKLSAKLQLITQQAYESLSDDQRYMISRTCGDRNCYDYYQKIPFTKECWTY
SIO_010081: FOC43_RS08800
subclass of: SO_0000673
so part of: FOC43_RS08800
location: complement(35869..36540)
location: region:35869-36540:-1
so has part: feature:35869-36540:-1:exon

WP_002779815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35869-36540:-1:exon