Rhinatrema bivittatum chromosome 18, aRhiBiv1.1, whole genome shotgun sequence.
type: Entry
definition: Rhinatrema bivittatum chromosome 18, aRhiBiv1.1, whole genome shotgun sequence.
sequence version: NC_042632.1
sequence date: 2019-06-28
sequence: sequence
division: CON
label: NC_042632.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA549481
dblink: SAMEA104387956
keyword: WGS
keyword: RefSeq
source: Rhinatrema bivittatum (two-lined caecilian)
organism: Rhinatrema bivittatum
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Rhinatrematidae; Rhinatrema.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR584404.1.\nAssembly name: aRhiBiv1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the SC on 2019/06/02. The\noriginal whole-genome shotgun project has the accession\nCAAJIB000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhinatrema bivittatum Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 61353747
topology: linear
so has quality: SO_0000987
location: 1..61353747
location: region:1-61353747:1
RO_0002162: 194408

NC_042632
type: RefSeq
SIO_000068: refseq

PRJNA549481
type: BioProject
SIO_000068: bioproject

SAMEA104387956
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61353747:1
position: 61353747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-61353747:1:source
so part of: sequence
organism: Rhinatrema bivittatum
mol type: genomic DNA
chromosome: 18

194408
type: Taxonomy
SIO_000068: taxonomy

LOC115080042
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115080042
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 46490..98840
location: region:46490-98840:1
so has part: feature:46490-98840:1:exon
subclass of: SO_0000011

115080042
type: Gene
SIO_000068: ncbigene

position:46490:1
position: 46490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98840:1
position: 98840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46490-98840:1:exon

LOC115080042
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115080042
product: uncharacterized LOC115080042
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003853496.1
SIO_010081: LOC115080042
subclass of: SO_0000673
so part of: LOC115080042
location: join(46490..46763,84854..84882,86060..86169,97977..98840)
location: region:46490-98840:1
so has part: feature:46490-46763:1:exon
so has part: feature:84854-84882:1:exon
so has part: feature:86060-86169:1:exon
so has part: feature:97977-98840:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46490-46763:1:exon

position:46763:1
position: 46763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:84854-84882:1:exon

position:84854:1
position: 84854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84882:1
position: 84882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:86060-86169:1:exon

position:86060:1
position: 86060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86169:1
position: 86169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:97977-98840:1:exon

position:97977:1
position: 97977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FOXI1
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: FOXI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(622575..626051)
location: region:622575-626051:-1
so has part: feature:622575-626051:-1:exon
subclass of: SO_0000010

115079976
type: Gene
SIO_000068: ncbigene

position:622575:-1
position: 622575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626051:-1
position: 626051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622575-626051:-1:exon

FOXI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: FOXI1
product: forkhead box I1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_029583969.1
SIO_010081: FOXI1
subclass of: SO_0000673
so part of: FOXI1
location: complement(join(622575..624158,625439..626051))
location: region:622575-626051:-1
so has part: feature:625439-626051:-1:exon
so has part: feature:622575-624158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:625439-626051:-1:exon

position:625439:-1
position: 625439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622575-624158:-1:exon

position:624158:-1
position: 624158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FOXI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: FOXI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein I1
translation: MMSSFNPQTHSPPRCSPQFPSIGQEPPEMNMYCENFFQPQNIPSPQRPSTYDASDYGTTTNPYLWLNGHSIPPTPYLPGSNSSPFVPQSYGMQRQLPLNVHGDLSWLPIPSQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDINSSTNSLASVKSEDSPLSSSPKSTDHQELVESSSPGSENSPEKRGSPPSTSPCLSNFLSSMTAYVTSANAASRPVPLGLAHETSDKMGQNMAGFNSYSPMANIPNHGGSEWANPVTSSHFSYSSSVLNHFNSHFYNSISSNSALYPREGTEV
SIO_010081: FOXI1
subclass of: SO_0000673
so part of: FOXI1
location: complement(join(623608..624158,625439..626003))
location: region:623608-626003:-1
so has part: feature:625439-626003:-1:exon
so has part: feature:623608-624158:-1:exon

XP_029439829.1
type: Protein
SIO_000068: ncbiprotein

position:623608:-1
position: 623608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626003:-1
position: 626003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625439-626003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623608-624158:-1:exon

LOC115079628
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115079628
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(734060..1726014)
location: region:734060-1726014:-1
so has part: feature:734060-1726014:-1:exon
subclass of: SO_0000010

115079628
type: Gene
SIO_000068: ncbigene

position:734060:-1
position: 734060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1726014:-1
position: 1726014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734060-1726014:-1:exon

LOC115079628
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: LOC115079628
product: dedicator of cytokinesis protein 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029583335.1
SIO_010081: LOC115079628
subclass of: SO_0000673
so part of: LOC115079628
location: complement(join(734060..736812,755315..755457,782512..782629,794235..794415,813232..813359,829305..829442,831716..831799,846055..846231,846818..846904,858101..858185,858533..858614,873928..874069,881414..881518,900265..900354,937042..937161,944150..944240,954857..954897,969873..970029,984908..984993,997960..998108,1032156..1032214,1037399..1037499,1057715..1057793,1065312..1065406,1083611..1083709,1129165..1129260,1140837..1140979,1153311..1153417,1206503..1206573,1209395..1209503,1220266..1220400,1243085..1243185,1262037..1262126,1288156..1288253,1288333..1288516,1331051..1331154,1344928..1345000,1352588..1352686,1384280..1384395,1399052..1399177,1417407..1417483,1440378..1440453,1460766..1460901,1474401..1474482,1504254..1504406,1533234..1533369,1579624..1579772,1597079..1597175,1621842..1621897,1646183..1646223,1680183..1680266,1725776..1726014))
location: region:734060-1726014:-1
so has part: feature:1725776-1726014:-1:exon
so has part: feature:1680183-1680266:-1:exon
so has part: feature:1646183-1646223:-1:exon
so has part: feature:1621842-1621897:-1:exon
so has part: feature:1597079-1597175:-1:exon
so has part: feature:1579624-1579772:-1:exon
so has part: feature:1533234-1533369:-1:exon
so has part: feature:1504254-1504406:-1:exon
so has part: feature:1474401-1474482:-1:exon
so has part: feature:1460766-1460901:-1:exon
so has part: feature:1440378-1440453:-1:exon
so has part: feature:1417407-1417483:-1:exon
so has part: feature:1399052-1399177:-1:exon
so has part: feature:1384280-1384395:-1:exon
so has part: feature:1352588-1352686:-1:exon
so has part: feature:1344928-1345000:-1:exon
so has part: feature:1331051-1331154:-1:exon
so has part: feature:1288333-1288516:-1:exon
so has part: feature:1288156-1288253:-1:exon
so has part: feature:1262037-1262126:-1:exon
so has part: feature:1243085-1243185:-1:exon
so has part: feature:1220266-1220400:-1:exon
so has part: feature:1209395-1209503:-1:exon
so has part: feature:1206503-1206573:-1:exon
so has part: feature:1153311-1153417:-1:exon
so has part: feature:1140837-1140979:-1:exon
so has part: feature:1129165-1129260:-1:exon
so has part: feature:1083611-1083709:-1:exon
so has part: feature:1065312-1065406:-1:exon
so has part: feature:1057715-1057793:-1:exon
so has part: feature:1037399-1037499:-1:exon
so has part: feature:1032156-1032214:-1:exon
so has part: feature:997960-998108:-1:exon
so has part: feature:984908-984993:-1:exon
so has part: feature:969873-970029:-1:exon
so has part: feature:954857-954897:-1:exon
so has part: feature:944150-944240:-1:exon
so has part: feature:937042-937161:-1:exon
so has part: feature:900265-900354:-1:exon
so has part: feature:881414-881518:-1:exon
so has part: feature:873928-874069:-1:exon
so has part: feature:858533-858614:-1:exon
so has part: feature:858101-858185:-1:exon
so has part: feature:846818-846904:-1:exon
so has part: feature:846055-846231:-1:exon
so has part: feature:831716-831799:-1:exon
so has part: feature:829305-829442:-1:exon
so has part: feature:813232-813359:-1:exon
so has part: feature:794235-794415:-1:exon
so has part: feature:782512-782629:-1:exon
so has part: feature:755315-755457:-1:exon
so has part: feature:734060-736812:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1725776-1726014:-1:exon

position:1725776:-1
position: 1725776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1680183-1680266:-1:exon

position:1680183:-1
position: 1680183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1680266:-1
position: 1680266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1646183-1646223:-1:exon

position:1646183:-1
position: 1646183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1646223:-1
position: 1646223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1621842-1621897:-1:exon

position:1621842:-1
position: 1621842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1621897:-1
position: 1621897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1597079-1597175:-1:exon

position:1597079:-1
position: 1597079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1597175:-1
position: 1597175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1579624-1579772:-1:exon

position:1579624:-1
position: 1579624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1579772:-1
position: 1579772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1533234-1533369:-1:exon

position:1533234:-1
position: 1533234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1533369:-1
position: 1533369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1504254-1504406:-1:exon

position:1504254:-1
position: 1504254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1504406:-1
position: 1504406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1474401-1474482:-1:exon

position:1474401:-1
position: 1474401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1474482:-1
position: 1474482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1460766-1460901:-1:exon

position:1460766:-1
position: 1460766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460901:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1440378-1440453:-1:exon

position:1440378:-1
position: 1440378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1440453:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1417407-1417483:-1:exon

position:1417407:-1
position: 1417407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1417483:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1399052-1399177:-1:exon

position:1399052:-1
position: 1399052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399177:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1384280-1384395:-1:exon

position:1384280:-1
position: 1384280
reference: sequence
type: ReverseStrandPosition
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position:1384395:-1
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:1352588-1352686:-1:exon

position:1352588:-1
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reference: sequence
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position:1352686:-1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:1344928-1345000:-1:exon

position:1344928:-1
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reference: sequence
type: ReverseStrandPosition
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position:1345000:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1331051-1331154:-1:exon

position:1331051:-1
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reference: sequence
type: ReverseStrandPosition
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position:1331154:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:1288333-1288516:-1:exon

position:1288333:-1
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reference: sequence
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position:1288516:-1
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urn:…
SIO_000300: 19
SIO_000628: feature:1288156-1288253:-1:exon

position:1288156:-1
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reference: sequence
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position:1288253:-1
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:1262037-1262126:-1:exon

position:1262037:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262126:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1243085-1243185:-1:exon

position:1243085:-1
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reference: sequence
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position:1243185:-1
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:1220266-1220400:-1:exon

position:1220266:-1
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reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:1209395-1209503:-1:exon

position:1209395:-1
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reference: sequence
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type: ExactPosition

position:1209503:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1206503-1206573:-1:exon

position:1206503:-1
position: 1206503
reference: sequence
type: ReverseStrandPosition
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position:1206573:-1
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reference: sequence
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urn:…
SIO_000300: 25
SIO_000628: feature:1153311-1153417:-1:exon

position:1153311:-1
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reference: sequence
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position:1153417:-1
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urn:…
SIO_000300: 26
SIO_000628: feature:1140837-1140979:-1:exon

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reference: sequence
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urn:…
SIO_000300: 27
SIO_000628: feature:1129165-1129260:-1:exon

position:1129165:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1129260:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1083611-1083709:-1:exon

position:1083611:-1
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reference: sequence
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type: ExactPosition

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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1065312-1065406:-1:exon

position:1065312:-1
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reference: sequence
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urn:…
SIO_000300: 30
SIO_000628: feature:1057715-1057793:-1:exon

position:1057715:-1
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reference: sequence
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1037399-1037499:-1:exon

position:1037399:-1
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reference: sequence
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position:1037499:-1
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reference: sequence
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urn:…
SIO_000300: 32
SIO_000628: feature:1032156-1032214:-1:exon

position:1032156:-1
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reference: sequence
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position:1032214:-1
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reference: sequence
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urn:…
SIO_000300: 33
SIO_000628: feature:997960-998108:-1:exon

position:997960:-1
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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 34
SIO_000628: feature:984908-984993:-1:exon

position:984908:-1
position: 984908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984993:-1
position: 984993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:969873-970029:-1:exon

position:969873:-1
position: 969873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970029:-1
position: 970029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:954857-954897:-1:exon

position:954857:-1
position: 954857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954897:-1
position: 954897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:944150-944240:-1:exon

position:944150:-1
position: 944150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944240:-1
position: 944240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:937042-937161:-1:exon

position:937042:-1
position: 937042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937161:-1
position: 937161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:900265-900354:-1:exon

position:900265:-1
position: 900265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900354:-1
position: 900354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:881414-881518:-1:exon

position:881414:-1
position: 881414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881518:-1
position: 881518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:873928-874069:-1:exon

position:873928:-1
position: 873928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874069:-1
position: 874069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:858533-858614:-1:exon

position:858533:-1
position: 858533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858614:-1
position: 858614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:858101-858185:-1:exon

position:858101:-1
position: 858101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858185:-1
position: 858185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:846818-846904:-1:exon

position:846818:-1
position: 846818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846904:-1
position: 846904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:846055-846231:-1:exon

position:846055:-1
position: 846055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846231:-1
position: 846231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:831716-831799:-1:exon

position:831716:-1
position: 831716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831799:-1
position: 831799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:829305-829442:-1:exon

position:829305:-1
position: 829305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829442:-1
position: 829442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:813232-813359:-1:exon

position:813232:-1
position: 813232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813359:-1
position: 813359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:794235-794415:-1:exon

position:794235:-1
position: 794235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794415:-1
position: 794415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:782512-782629:-1:exon

position:782512:-1
position: 782512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782629:-1
position: 782629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:755315-755457:-1:exon

position:755315:-1
position: 755315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755457:-1
position: 755457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:734060-736812:-1:exon

position:736812:-1
position: 736812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115079628
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: LOC115079628
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: dedicator of cytokinesis protein 2-like
translation: MTPWHKTGKERYGVAIYNFKATGVPQLSLQIGDTVHILESCEDWYRGYLVKHRIFEGIFPKSFIHIKEVIIEKTRKKEHVIPAEIPLVQEVTSTLREWGNIWKQLYLTSKVECFQHVRCMMYKLMEWRSQLLSGTLPKDELKELKQKVTSKIDYGNRILELDLIVRDEDGNILDPDKTSIISLFHAHEEANNKITERMKEEASRTQTDFSISSRISSXPTHSLYVFVRNFVCRIGEDAELFMSLYDPQKQTIISENYLVRWGSKGFPKEIDLLNNLKVVFTDLGNRDLNRDKIYLVCQIVRIGRMDLKENNIKKCTQGLRRPFGVAVMDITDVIKGKIESDEEKQHFIPFHPVIAESDFLHTLLNKVTATKGDSGGQGLWVTMKMLVGDIVQIRKESPHLVDRTTVVARKLGFPEIIMPGDIRNDIYITLIQGDFDKTTQRNVELIMSVCDEEGKVIPSAICIGAGEKPVNEYRSVLYYQTKQPRWMETVKVAVSIEEMQRIHLRFMFRHRSSQDSKDKGERNFAMAYVKLMKDDGTTLQDGCHDLVVLKGDSKKMEDSSSYLTLPSTRQQMDSKGSTLSRGPSSAGGLSVSSRDAFSISTLVCSTKLTQNVGLLGLLKWKMKPELLQENLEKLKIVDGEEVVKFLQDTLDVLFNIMMEHSHSDQYDILVFDALIYIIGLIADRKFQHFNTVLEAYLKQHFSATLAYKKLMSVLKNYLDTSSRGEQCEPILRTLKALEYVFKFIVRSRTLFSQLYEGKEQIEFEDSMRKLFESINSLMKSQHKTTILLQVAALKYLPSVVPDVETVFDAKLLSQLLYEFYMCIPPDKLQKQKVQSMNEIVHSKLFIKPECRDILLPMITKELKMLLEQREEQHLQEKKYCVELLNSILEVLSCQDASSTCHHIQEIIVQLLRTVNRTVITMGRDHSLISHFVACMTAILNQMDNQHYCFYIETFQLSCDLVDFLMETFIMFKDLIGKNVYPSDWMTMSLVQNRVFLRAINKFAETMNQKFLANKNFEMQLWNNYFHLAVAFITQDSLQLENFSHAKYNKILNKYGDMRCLIGFAIRDMWYKLGQNKICFIPGMVGPILEMTLIPEVELRKATIPIFFDMMLCEYRMTGTFKKFENEIILKLDHEVEGGRGDEQFMQLFESILLECASEFLDIFQPLENFVNLVKGLLEKLLDYRAVMNDESKDNRMSCTVNLLNFYRDINREAMYIRYLYKLRDLHLDCENYTEAAYTLLLHTKLLKWSEEQCSPEIMQTEFPCTQTHRQLKEHLYETTIGYFDKGKMWEEAISLCKELKEQYEMEIFDYELLSQCLIQQAKFYENIMKILRPKPDYFAVGYYGLGFPTFLQNKVFIYRGKEYERREDFQTKLMTQFPFSERINTTLAPENDVKNSPGQYIQCFTVQPVLEEQPQFTNKPVPDQIINFYKSNYVQRFQYSRPVRRGSMDPENEFASMWIERTTFVTAYKLPGILRWFEVTAMSHTTISPLENAIETMSVTNEKILMMINQYQSDENLPINPLSMLLNGIVDPAVMGGFAKYEKAFFTDLYARQHPEDHEKLNRLKDLIAWQIPFLGAGIKIHEKRIGDDLRPFHSRMEECFRNLRAKVEQQYGKRELPDFDDRRVGRPRSILRSYRQISIISLASVNSDCSTPTKPAPESFELEVPSLKSGRCEGDCIQLQVRTEPEVKLRRSRKKLKRSSVLFADEKAAVDLAPSSMKQLSRKHEFMSDTNLSEHVATAPKALLKQMSLASRSMPTISALTLSVVSGPVSEEQSVTHRLSLQFPTTSEGDRKTLKKSKVNQFFKIKLTSKAEDGKQPSEQLSEKLSIDL
SIO_010081: LOC115079628
subclass of: SO_0000673
so part of: LOC115079628
location: complement(join(736741..736812,755315..755457,782512..782629,794235..794415,813232..813359,829305..829442,831716..831799,846055..846231,846818..846904,858101..858185,858533..858614,873928..874069,881414..881518,900265..900354,937042..937161,944150..944240,954857..954897,969873..970029,984908..984993,997960..998108,1032156..1032214,1037399..1037499,1057715..1057793,1065312..1065406,1083611..1083709,1129165..1129260,1140837..1140979,1153311..1153417,1206503..1206573,1209395..1209503,1220266..1220400,1243085..1243185,1262037..1262126,1288156..1288253,1288333..1288516,1331051..1331154,1344928..1345000,1352588..1352686,1384280..1384395,1399052..1399177,1417407..1417483,1440378..1440453,1460766..1460901,1474401..1474482,1504254..1504406,1533234..1533369,1579624..1579772,1597079..1597175,1621842..1621897,1646183..1646223,1680183..1680266,1725776..1725818))
location: region:736741-1725818:-1
so has part: feature:1725776-1725818:-1:exon
so has part: feature:1680183-1680266:-1:exon
so has part: feature:1646183-1646223:-1:exon
so has part: feature:1621842-1621897:-1:exon
so has part: feature:1597079-1597175:-1:exon
so has part: feature:1579624-1579772:-1:exon
so has part: feature:1533234-1533369:-1:exon
so has part: feature:1504254-1504406:-1:exon
so has part: feature:1474401-1474482:-1:exon
so has part: feature:1460766-1460901:-1:exon
so has part: feature:1440378-1440453:-1:exon
so has part: feature:1417407-1417483:-1:exon
so has part: feature:1399052-1399177:-1:exon
so has part: feature:1384280-1384395:-1:exon
so has part: feature:1352588-1352686:-1:exon
so has part: feature:1344928-1345000:-1:exon
so has part: feature:1331051-1331154:-1:exon
so has part: feature:1288333-1288516:-1:exon
so has part: feature:1288156-1288253:-1:exon
so has part: feature:1262037-1262126:-1:exon
so has part: feature:1243085-1243185:-1:exon
so has part: feature:1220266-1220400:-1:exon
so has part: feature:1209395-1209503:-1:exon
so has part: feature:1206503-1206573:-1:exon
so has part: feature:1153311-1153417:-1:exon
so has part: feature:1140837-1140979:-1:exon
so has part: feature:1129165-1129260:-1:exon
so has part: feature:1083611-1083709:-1:exon
so has part: feature:1065312-1065406:-1:exon
so has part: feature:1057715-1057793:-1:exon
so has part: feature:1037399-1037499:-1:exon
so has part: feature:1032156-1032214:-1:exon
so has part: feature:997960-998108:-1:exon
so has part: feature:984908-984993:-1:exon
so has part: feature:969873-970029:-1:exon
so has part: feature:954857-954897:-1:exon
so has part: feature:944150-944240:-1:exon
so has part: feature:937042-937161:-1:exon
so has part: feature:900265-900354:-1:exon
so has part: feature:881414-881518:-1:exon
so has part: feature:873928-874069:-1:exon
so has part: feature:858533-858614:-1:exon
so has part: feature:858101-858185:-1:exon
so has part: feature:846818-846904:-1:exon
so has part: feature:846055-846231:-1:exon
so has part: feature:831716-831799:-1:exon
so has part: feature:829305-829442:-1:exon
so has part: feature:813232-813359:-1:exon
so has part: feature:794235-794415:-1:exon
so has part: feature:782512-782629:-1:exon
so has part: feature:755315-755457:-1:exon
so has part: feature:736741-736812:-1:exon

XP_029439195.1
type: Protein
SIO_000068: ncbiprotein

position:736741:-1
position: 736741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1725818:-1
position: 1725818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1725776-1725818:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1680183-1680266:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1646183-1646223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621842-1621897:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1597079-1597175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1579624-1579772:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1533234-1533369:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1504254-1504406:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1474401-1474482:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1460766-1460901:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1440378-1440453:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1417407-1417483:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399052-1399177:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1384280-1384395:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1352588-1352686:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1344928-1345000:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1331051-1331154:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1288333-1288516:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1288156-1288253:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1262037-1262126:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1243085-1243185:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1220266-1220400:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1209395-1209503:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1206503-1206573:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1153311-1153417:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1140837-1140979:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1129165-1129260:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1083611-1083709:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1065312-1065406:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1057715-1057793:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1037399-1037499:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1032156-1032214:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:997960-998108:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:984908-984993:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:969873-970029:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:954857-954897:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:944150-944240:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:937042-937161:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:900265-900354:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:881414-881518:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:873928-874069:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:858533-858614:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:858101-858185:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:846818-846904:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:846055-846231:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:831716-831799:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:829305-829442:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:813232-813359:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:794235-794415:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:782512-782629:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:755315-755457:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:736741-736812:-1:exon

HNRNPH1
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: HNRNPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1784084..1913212
location: region:1784084-1913212:1
so has part: feature:1784084-1913212:1:exon
subclass of: SO_0000010

115079760
type: Gene
SIO_000068: ncbigene

position:1784084:1
position: 1784084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1913212:1
position: 1913212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1784084-1913212:1:exon

HNRNPH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: HNRNPH1
product: heterogeneous nuclear ribonucleoprotein H1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_029583596.1
SIO_010081: HNRNPH1
subclass of: SO_0000673
so part of: HNRNPH1
location: join(1784084..1784213,1784980..1785126,1799785..1799940,1811429..1811572,1814213..1814351,1815341..1815507,1843598..1843672,1843746..1843858,1858451..1858586,1884419..1884502,1892996..1893088,1895990..1896034,1912550..1913212)
location: region:1784084-1913212:1
so has part: feature:1784084-1784213:1:exon
so has part: feature:1784980-1785126:1:exon
so has part: feature:1799785-1799940:1:exon
so has part: feature:1811429-1811572:1:exon
so has part: feature:1814213-1814351:1:exon
so has part: feature:1815341-1815507:1:exon
so has part: feature:1843598-1843672:1:exon
so has part: feature:1843746-1843858:1:exon
so has part: feature:1858451-1858586:1:exon
so has part: feature:1884419-1884502:1:exon
so has part: feature:1892996-1893088:1:exon
so has part: feature:1895990-1896034:1:exon
so has part: feature:1912550-1913212:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1784084-1784213:1:exon

position:1784213:1
position: 1784213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1784980-1785126:1:exon

position:1784980:1
position: 1784980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1785126:1
position: 1785126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1799785-1799940:1:exon

position:1799785:1
position: 1799785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799940:1
position: 1799940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1811429-1811572:1:exon

position:1811429:1
position: 1811429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1811572:1
position: 1811572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1814213-1814351:1:exon

position:1814213:1
position: 1814213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1814351:1
position: 1814351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1815341-1815507:1:exon

position:1815341:1
position: 1815341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1815507:1
position: 1815507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1843598-1843672:1:exon

position:1843598:1
position: 1843598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1843672:1
position: 1843672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1843746-1843858:1:exon

position:1843746:1
position: 1843746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1843858:1
position: 1843858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1858451-1858586:1:exon

position:1858451:1
position: 1858451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1858586:1
position: 1858586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1884419-1884502:1:exon

position:1884419:1
position: 1884419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1884502:1
position: 1884502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1892996-1893088:1:exon

position:1892996:1
position: 1892996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1893088:1
position: 1893088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1895990-1896034:1:exon

position:1895990:1
position: 1895990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1896034:1
position: 1896034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1912550-1913212:1:exon

position:1912550:1
position: 1912550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HNRNPH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: HNRNPH1
product: heterogeneous nuclear ribonucleoprotein H1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_029583597.1
SIO_010081: HNRNPH1
subclass of: SO_0000673
so part of: HNRNPH1
location: join(1784084..1784213,1784980..1785126,1799785..1799940,1811429..1811572,1814213..1814351,1815341..1815507,1843598..1843672,1843746..1843858,1858451..1858586,1884419..1884502,1892996..1893088,1912550..1913212)
location: region:1784084-1913212:1
so has part: feature:1784084-1784213:1:exon
so has part: feature:1784980-1785126:1:exon
so has part: feature:1799785-1799940:1:exon
so has part: feature:1811429-1811572:1:exon
so has part: feature:1814213-1814351:1:exon
so has part: feature:1815341-1815507:1:exon
so has part: feature:1843598-1843672:1:exon
so has part: feature:1843746-1843858:1:exon
so has part: feature:1858451-1858586:1:exon
so has part: feature:1884419-1884502:1:exon
so has part: feature:1892996-1893088:1:exon
so has part: feature:1912550-1913212:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1784084-1784213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1784980-1785126:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1799785-1799940:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1811429-1811572:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1814213-1814351:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1815341-1815507:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1843598-1843672:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1843746-1843858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1858451-1858586:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1884419-1884502:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1892996-1893088:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1912550-1913212:1:exon

HNRNPH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: HNRNPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein H isoform X1
translation: MSGTESSEGFVIKVRGLPWSCSAEEIQRFFSDCKILNEASGVRFIYTREGRPSGEAFVELESEEDVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGVGRGYNMGRGFDRMRRSYGGGYGGYEDYNGYNDGYGFGSDNRFGRGVSDHRYGDGTSTFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGSDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLNSTAGGSGAGYSSQMIGAMGNQSTYAAAGNQQLTGSYAGAYGSQGSLSGYDPVQSVPPGKSDEFAGNQTGMNSSYYSSGTRGSMGVNGMGGMSSSMSISGAWGM
SIO_010081: HNRNPH1
subclass of: SO_0000673
so part of: HNRNPH1
location: join(1785033..1785126,1799785..1799940,1811429..1811572,1814213..1814351,1815341..1815507,1843598..1843672,1843746..1843858,1858451..1858586,1884419..1884502,1892996..1893088,1895990..1896034,1912550..1912668)
location: region:1785033-1912668:1
so has part: feature:1785033-1785126:1:exon
so has part: feature:1799785-1799940:1:exon
so has part: feature:1811429-1811572:1:exon
so has part: feature:1814213-1814351:1:exon
so has part: feature:1815341-1815507:1:exon
so has part: feature:1843598-1843672:1:exon
so has part: feature:1843746-1843858:1:exon
so has part: feature:1858451-1858586:1:exon
so has part: feature:1884419-1884502:1:exon
so has part: feature:1892996-1893088:1:exon
so has part: feature:1895990-1896034:1:exon
so has part: feature:1912550-1912668:1:exon

XP_029439456.1
type: Protein
SIO_000068: ncbiprotein

position:1785033:1
position: 1785033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1912668:1
position: 1912668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1785033-1785126:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1799785-1799940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1811429-1811572:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1814213-1814351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1815341-1815507:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1843598-1843672:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1843746-1843858:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1858451-1858586:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1884419-1884502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1892996-1893088:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1895990-1896034:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1912550-1912668:1:exon

HNRNPH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: HNRNPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein H isoform X2
translation: MSGTESSEGFVIKVRGLPWSCSAEEIQRFFSDCKILNEASGVRFIYTREGRPSGEAFVELESEEDVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGVGRGYNMGRGFDRMRRSYGGGYGGYEDYNGYNDGYGFGSDNRFGRGVSDHRYGDGTSTFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGSDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLNSTAGGSGAGYSSQMIGAMGNQSTYAAAGNQQLTGSYAGAYGSQGSLSGYGNQTGMNSSYYSSGTRGSMGVNGMGGMSSSMSISGAWGM
SIO_010081: HNRNPH1
subclass of: SO_0000673
so part of: HNRNPH1
location: join(1785033..1785126,1799785..1799940,1811429..1811572,1814213..1814351,1815341..1815507,1843598..1843672,1843746..1843858,1858451..1858586,1884419..1884502,1892996..1893088,1912550..1912668)
location: region:1785033-1912668:1
so has part: feature:1785033-1785126:1:exon
so has part: feature:1799785-1799940:1:exon
so has part: feature:1811429-1811572:1:exon
so has part: feature:1814213-1814351:1:exon
so has part: feature:1815341-1815507:1:exon
so has part: feature:1843598-1843672:1:exon
so has part: feature:1843746-1843858:1:exon
so has part: feature:1858451-1858586:1:exon
so has part: feature:1884419-1884502:1:exon
so has part: feature:1892996-1893088:1:exon
so has part: feature:1912550-1912668:1:exon

XP_029439457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1785033-1785126:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1799785-1799940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1811429-1811572:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1814213-1814351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1815341-1815507:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1843598-1843672:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1843746-1843858:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1858451-1858586:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1884419-1884502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1892996-1893088:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1912550-1912668:1:exon

RUFY1
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: RUFY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1952954..2606351)
location: region:1952954-2606351:-1
so has part: feature:1952954-2606351:-1:exon
subclass of: SO_0000010

115079593
type: Gene
SIO_000068: ncbigene

position:1952954:-1
position: 1952954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2606351:-1
position: 2606351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1952954-2606351:-1:exon

RUFY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: RUFY1
product: RUN and FYVE domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029583262.1
SIO_010081: RUFY1
subclass of: SO_0000673
so part of: RUFY1
location: complement(join(1952954..1953767,2035580..2035657,2042628..2042717,2053362..2053410,2054403..2054497,2110498..2110627,2163009..2163128,2187972..2188069,2260824..2260991,2272191..2272307,2330706..2330807,2346114..2346183,2354473..2354538,2363976..2364037,2408877..2409000,2429300..2429401,2506481..2506598,2528417..2528578,2606182..2606351))
location: region:1952954-2606351:-1
so has part: feature:2606182-2606351:-1:exon
so has part: feature:2528417-2528578:-1:exon
so has part: feature:2506481-2506598:-1:exon
so has part: feature:2429300-2429401:-1:exon
so has part: feature:2408877-2409000:-1:exon
so has part: feature:2363976-2364037:-1:exon
so has part: feature:2354473-2354538:-1:exon
so has part: feature:2346114-2346183:-1:exon
so has part: feature:2330706-2330807:-1:exon
so has part: feature:2272191-2272307:-1:exon
so has part: feature:2260824-2260991:-1:exon
so has part: feature:2187972-2188069:-1:exon
so has part: feature:2163009-2163128:-1:exon
so has part: feature:2110498-2110627:-1:exon
so has part: feature:2054403-2054497:-1:exon
so has part: feature:2053362-2053410:-1:exon
so has part: feature:2042628-2042717:-1:exon
so has part: feature:2035580-2035657:-1:exon
so has part: feature:1952954-1953767:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2606182-2606351:-1:exon

position:2606182:-1
position: 2606182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2528417-2528578:-1:exon

position:2528417:-1
position: 2528417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2528578:-1
position: 2528578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2506481-2506598:-1:exon

position:2506481:-1
position: 2506481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2506598:-1
position: 2506598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2429300-2429401:-1:exon

position:2429300:-1
position: 2429300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2429401:-1
position: 2429401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2408877-2409000:-1:exon

position:2408877:-1
position: 2408877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2409000:-1
position: 2409000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2363976-2364037:-1:exon

position:2363976:-1
position: 2363976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2364037:-1
position: 2364037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2354473-2354538:-1:exon

position:2354473:-1
position: 2354473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2354538:-1
position: 2354538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2346114-2346183:-1:exon

position:2346114:-1
position: 2346114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2346183:-1
position: 2346183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2330706-2330807:-1:exon

position:2330706:-1
position: 2330706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2330807:-1
position: 2330807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2272191-2272307:-1:exon

position:2272191:-1
position: 2272191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2272307:-1
position: 2272307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2260824-2260991:-1:exon

position:2260824:-1
position: 2260824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2260991:-1
position: 2260991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2187972-2188069:-1:exon

position:2187972:-1
position: 2187972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2188069:-1
position: 2188069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2163009-2163128:-1:exon

position:2163009:-1
position: 2163009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2163128:-1
position: 2163128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2110498-2110627:-1:exon

position:2110498:-1
position: 2110498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2110627:-1
position: 2110627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2054403-2054497:-1:exon

position:2054403:-1
position: 2054403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2054497:-1
position: 2054497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2053362-2053410:-1:exon

position:2053362:-1
position: 2053362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2053410:-1
position: 2053410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2042628-2042717:-1:exon

position:2042628:-1
position: 2042628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2042717:-1
position: 2042717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2035580-2035657:-1:exon

position:2035580:-1
position: 2035580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2035657:-1
position: 2035657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1952954-1953767:-1:exon

position:1953767:-1
position: 1953767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RUFY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: RUFY1
product: RUN and FYVE domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_029583264.1
SIO_010081: RUFY1
subclass of: SO_0000673
so part of: RUFY1
location: complement(join(1952954..1953767,2035580..2035657,2053362..2053410,2054403..2054497,2110498..2110627,2163009..2163128,2187972..2188069,2260824..2260991,2272191..2272307,2330706..2330807,2346114..2346183,2354473..2354538,2363976..2364037,2408877..2409000,2429300..2429401,2506481..2506598,2528417..2528578,2547005..2547063))
location: region:1952954-2547063:-1
so has part: feature:2547005-2547063:-1:exon
so has part: feature:2528417-2528578:-1:exon
so has part: feature:2506481-2506598:-1:exon
so has part: feature:2429300-2429401:-1:exon
so has part: feature:2408877-2409000:-1:exon
so has part: feature:2363976-2364037:-1:exon
so has part: feature:2354473-2354538:-1:exon
so has part: feature:2346114-2346183:-1:exon
so has part: feature:2330706-2330807:-1:exon
so has part: feature:2272191-2272307:-1:exon
so has part: feature:2260824-2260991:-1:exon
so has part: feature:2187972-2188069:-1:exon
so has part: feature:2163009-2163128:-1:exon
so has part: feature:2110498-2110627:-1:exon
so has part: feature:2054403-2054497:-1:exon
so has part: feature:2053362-2053410:-1:exon
so has part: feature:2035580-2035657:-1:exon
so has part: feature:1952954-1953767:-1:exon

position:2547063:-1
position: 2547063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2547005-2547063:-1:exon

position:2547005:-1
position: 2547005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2528417-2528578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2506481-2506598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2429300-2429401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2408877-2409000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2363976-2364037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2354473-2354538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2346114-2346183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2330706-2330807:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2272191-2272307:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2260824-2260991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2187972-2188069:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2163009-2163128:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2110498-2110627:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2054403-2054497:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2053362-2053410:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2035580-2035657:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1952954-1953767:-1:exon

RUFY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: RUFY1
product: RUN and FYVE domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029583261.1
SIO_010081: RUFY1
subclass of: SO_0000673
so part of: RUFY1
location: complement(join(1952954..1953767,2035580..2035657,2042628..2042717,2053362..2053410,2054403..2054497,2110498..2110627,2163009..2163128,2187972..2188069,2260824..2260991,2272191..2272307,2330706..2330807,2346114..2346183,2354473..2354538,2363976..2364037,2408877..2409000,2429300..2429401,2506481..2506598,2528417..2528578,2547005..2547063))
location: region:1952954-2547063:-1
so has part: feature:2547005-2547063:-1:exon
so has part: feature:2528417-2528578:-1:exon
so has part: feature:2506481-2506598:-1:exon
so has part: feature:2429300-2429401:-1:exon
so has part: feature:2408877-2409000:-1:exon
so has part: feature:2363976-2364037:-1:exon
so has part: feature:2354473-2354538:-1:exon
so has part: feature:2346114-2346183:-1:exon
so has part: feature:2330706-2330807:-1:exon
so has part: feature:2272191-2272307:-1:exon
so has part: feature:2260824-2260991:-1:exon
so has part: feature:2187972-2188069:-1:exon
so has part: feature:2163009-2163128:-1:exon
so has part: feature:2110498-2110627:-1:exon
so has part: feature:2054403-2054497:-1:exon
so has part: feature:2053362-2053410:-1:exon
so has part: feature:2042628-2042717:-1:exon
so has part: feature:2035580-2035657:-1:exon
so has part: feature:1952954-1953767:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2547005-2547063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2528417-2528578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2506481-2506598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2429300-2429401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2408877-2409000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2363976-2364037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2354473-2354538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2346114-2346183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2330706-2330807:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2272191-2272307:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2260824-2260991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2187972-2188069:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2163009-2163128:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2110498-2110627:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2054403-2054497:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2053362-2053410:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2042628-2042717:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2035580-2035657:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1952954-1953767:-1:exon

RUFY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: RUFY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN and FYVE domain-containing protein 1 isoform X2
translation: MDELINLMNMMKLSIKVLIQSALNVGRILDSDYPPLQQFFVVMEHCLKHGLKVKKNFIGQTKSFYGPLELVEKLCPEAADLATSVKSLPELKTGVGRGRAWLRLALMQKKLADYLKVLLDHKELLSEFYEPEALMMTEEGAMLVGMLVSLNVIDANLCLKGDDLDSQVGVIDFSLYLKDVSNIDEDRQNGEITAVLDQKHYVEELNRHLSCTVGDLQTKVDSIERTNSKLVEELAAAIDRIRSLQEEQQQLQQENTQIREQSERSVAVTKEDTKLELDTYKQSRQGLDEMYNEIWHQLKEEKRIRKELEKELELQTGMKTEMEIAMKLLEKDTHEKQNTLVTLRQQLDEVKAINLQMFQKVQSAESSVQLKNEMVSSLEVKTIHMIPTSKQMEERFQEFEKARQEAEQNNQKMKHEFGEKVNASEQHLAELDNQCSSLERELKSEKEQRQNLQQELQQEKDKTCLLQTELQQVAGLKKELQKLQDEKRQLQKICEEQEQALQEMGLHLSQSKLKMEDIKEVNKALKGHSWLKDDEATDCKQCQKEFSISRRKHHCRNCGDIFCNSCSNNELSLPSYPKPVRVCDACHTLLLQRCSSKTT
SIO_010081: RUFY1
subclass of: SO_0000673
so part of: RUFY1
location: complement(join(1953624..1953767,2035580..2035657,2053362..2053410,2054403..2054497,2110498..2110627,2163009..2163128,2187972..2188069,2260824..2260991,2272191..2272307,2330706..2330807,2346114..2346183,2354473..2354538,2363976..2364037,2408877..2409000,2429300..2429401,2506481..2506598,2528417..2528573))
location: region:1953624-2528573:-1
so has part: feature:2528417-2528573:-1:exon
so has part: feature:2506481-2506598:-1:exon
so has part: feature:2429300-2429401:-1:exon
so has part: feature:2408877-2409000:-1:exon
so has part: feature:2363976-2364037:-1:exon
so has part: feature:2354473-2354538:-1:exon
so has part: feature:2346114-2346183:-1:exon
so has part: feature:2330706-2330807:-1:exon
so has part: feature:2272191-2272307:-1:exon
so has part: feature:2260824-2260991:-1:exon
so has part: feature:2187972-2188069:-1:exon
so has part: feature:2163009-2163128:-1:exon
so has part: feature:2110498-2110627:-1:exon
so has part: feature:2054403-2054497:-1:exon
so has part: feature:2053362-2053410:-1:exon
so has part: feature:2035580-2035657:-1:exon
so has part: feature:1953624-1953767:-1:exon

XP_029439124.1
type: Protein
SIO_000068: ncbiprotein

position:1953624:-1
position: 1953624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2528573:-1
position: 2528573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2528417-2528573:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2506481-2506598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2429300-2429401:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2408877-2409000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2363976-2364037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2354473-2354538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2346114-2346183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2330706-2330807:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2272191-2272307:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2260824-2260991:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2187972-2188069:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2163009-2163128:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2110498-2110627:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2054403-2054497:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2053362-2053410:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2035580-2035657:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1953624-1953767:-1:exon

RUFY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: RUFY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN and FYVE domain-containing protein 1 isoform X1
translation: MDELINLMNMMKLSIKVLIQSALNVGRILDSDYPPLQQFFVVMEHCLKHGLKVKKNFIGQTKSFYGPLELVEKLCPEAADLATSVKSLPELKTGVGRGRAWLRLALMQKKLADYLKVLLDHKELLSEFYEPEALMMTEEGAMLVGMLVSLNVIDANLCLKGDDLDSQVGVIDFSLYLKDVSNIDEDRQNGEITAVLDQKHYVEELNRHLSCTVGDLQTKVDSIERTNSKLVEELAAAIDRIRSLQEEQQQLQQENTQIREQSERSVAVTKEDTKLELDTYKQSRQGLDEMYNEIWHQLKEEKRIRKELEKELELQTGMKTEMEIAMKLLEKDTHEKQNTLVTLRQQLDEVKAINLQMFQKVQSAESSVQLKNEMVSSLEVKTIHMIPTSKQMEERFQEFEKARQEAEQNNQKMKHEFGEKVNASEQHLAELDNQCSSLERELKSEKEQRQNLQQELQQEKDKTCLLQTELQQVAGLKKELQKLQDEKRQLQKICEEQEQALQEMGLHLSQSKLKMEDIKEVNKALKDIQMNPASLPWLPNDCIIILLCAYKLQGLLGHSWLKDDEATDCKQCQKEFSISRRKHHCRNCGDIFCNSCSNNELSLPSYPKPVRVCDACHTLLLQRCSSKTT
SIO_010081: RUFY1
subclass of: SO_0000673
so part of: RUFY1
location: complement(join(1953624..1953767,2035580..2035657,2042628..2042717,2053362..2053410,2054403..2054497,2110498..2110627,2163009..2163128,2187972..2188069,2260824..2260991,2272191..2272307,2330706..2330807,2346114..2346183,2354473..2354538,2363976..2364037,2408877..2409000,2429300..2429401,2506481..2506598,2528417..2528573))
location: region:1953624-2528573:-1
so has part: feature:2528417-2528573:-1:exon
so has part: feature:2506481-2506598:-1:exon
so has part: feature:2429300-2429401:-1:exon
so has part: feature:2408877-2409000:-1:exon
so has part: feature:2363976-2364037:-1:exon
so has part: feature:2354473-2354538:-1:exon
so has part: feature:2346114-2346183:-1:exon
so has part: feature:2330706-2330807:-1:exon
so has part: feature:2272191-2272307:-1:exon
so has part: feature:2260824-2260991:-1:exon
so has part: feature:2187972-2188069:-1:exon
so has part: feature:2163009-2163128:-1:exon
so has part: feature:2110498-2110627:-1:exon
so has part: feature:2054403-2054497:-1:exon
so has part: feature:2053362-2053410:-1:exon
so has part: feature:2042628-2042717:-1:exon
so has part: feature:2035580-2035657:-1:exon
so has part: feature:1953624-1953767:-1:exon

XP_029439121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2528417-2528573:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2506481-2506598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2429300-2429401:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2408877-2409000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2363976-2364037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2354473-2354538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2346114-2346183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2330706-2330807:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2272191-2272307:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2260824-2260991:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2187972-2188069:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2163009-2163128:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2110498-2110627:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2054403-2054497:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2053362-2053410:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2042628-2042717:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2035580-2035657:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1953624-1953767:-1:exon

RUFY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: RUFY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN and FYVE domain-containing protein 1 isoform X1
translation: MDELINLMNMMKLSIKVLIQSALNVGRILDSDYPPLQQFFVVMEHCLKHGLKVKKNFIGQTKSFYGPLELVEKLCPEAADLATSVKSLPELKTGVGRGRAWLRLALMQKKLADYLKVLLDHKELLSEFYEPEALMMTEEGAMLVGMLVSLNVIDANLCLKGDDLDSQVGVIDFSLYLKDVSNIDEDRQNGEITAVLDQKHYVEELNRHLSCTVGDLQTKVDSIERTNSKLVEELAAAIDRIRSLQEEQQQLQQENTQIREQSERSVAVTKEDTKLELDTYKQSRQGLDEMYNEIWHQLKEEKRIRKELEKELELQTGMKTEMEIAMKLLEKDTHEKQNTLVTLRQQLDEVKAINLQMFQKVQSAESSVQLKNEMVSSLEVKTIHMIPTSKQMEERFQEFEKARQEAEQNNQKMKHEFGEKVNASEQHLAELDNQCSSLERELKSEKEQRQNLQQELQQEKDKTCLLQTELQQVAGLKKELQKLQDEKRQLQKICEEQEQALQEMGLHLSQSKLKMEDIKEVNKALKDIQMNPASLPWLPNDCIIILLCAYKLQGLLGHSWLKDDEATDCKQCQKEFSISRRKHHCRNCGDIFCNSCSNNELSLPSYPKPVRVCDACHTLLLQRCSSKTT
SIO_010081: RUFY1
subclass of: SO_0000673
so part of: RUFY1
location: complement(join(1953624..1953767,2035580..2035657,2042628..2042717,2053362..2053410,2054403..2054497,2110498..2110627,2163009..2163128,2187972..2188069,2260824..2260991,2272191..2272307,2330706..2330807,2346114..2346183,2354473..2354538,2363976..2364037,2408877..2409000,2429300..2429401,2506481..2506598,2528417..2528573))
location: region:1953624-2528573:-1
so has part: feature:2528417-2528573:-1:exon
so has part: feature:2506481-2506598:-1:exon
so has part: feature:2429300-2429401:-1:exon
so has part: feature:2408877-2409000:-1:exon
so has part: feature:2363976-2364037:-1:exon
so has part: feature:2354473-2354538:-1:exon
so has part: feature:2346114-2346183:-1:exon
so has part: feature:2330706-2330807:-1:exon
so has part: feature:2272191-2272307:-1:exon
so has part: feature:2260824-2260991:-1:exon
so has part: feature:2187972-2188069:-1:exon
so has part: feature:2163009-2163128:-1:exon
so has part: feature:2110498-2110627:-1:exon
so has part: feature:2054403-2054497:-1:exon
so has part: feature:2053362-2053410:-1:exon
so has part: feature:2042628-2042717:-1:exon
so has part: feature:2035580-2035657:-1:exon
so has part: feature:1953624-1953767:-1:exon

XP_029439122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2528417-2528573:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2506481-2506598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2429300-2429401:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2408877-2409000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2363976-2364037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2354473-2354538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2346114-2346183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2330706-2330807:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2272191-2272307:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2260824-2260991:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2187972-2188069:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2163009-2163128:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2110498-2110627:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2054403-2054497:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2053362-2053410:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2042628-2042717:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2035580-2035657:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1953624-1953767:-1:exon

RUFY1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 194408
gene: RUFY1
product: RUN and FYVE domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003853338.1
SIO_010081: RUFY1
so part of: RUFY1
location: complement(join(2053389..2053410,2054403..2054497,2055941..2056186,2110498..2110627,2163009..2163128,2187972..2188069,2260824..2260991,2272191..2272307,2330706..2330807,2346114..2346183,2354473..2354538,2363976..2364037,2408877..2409000,2429300..2429401,2506481..2506598,2528417..2528578,2547005..2547063))
location: region:2053389-2547063:-1
so has part: feature:2547005-2547063:-1:exon
so has part: feature:2528417-2528578:-1:exon
so has part: feature:2506481-2506598:-1:exon
so has part: feature:2429300-2429401:-1:exon
so has part: feature:2408877-2409000:-1:exon
so has part: feature:2363976-2364037:-1:exon
so has part: feature:2354473-2354538:-1:exon
so has part: feature:2346114-2346183:-1:exon
so has part: feature:2330706-2330807:-1:exon
so has part: feature:2272191-2272307:-1:exon
so has part: feature:2260824-2260991:-1:exon
so has part: feature:2187972-2188069:-1:exon
so has part: feature:2163009-2163128:-1:exon
so has part: feature:2110498-2110627:-1:exon
so has part: feature:2055941-2056186:-1:exon
so has part: feature:2054403-2054497:-1:exon
so has part: feature:2053389-2053410:-1:exon

position:2053389:-1
position: 2053389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2547005-2547063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2528417-2528578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2506481-2506598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2429300-2429401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2408877-2409000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2363976-2364037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2354473-2354538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2346114-2346183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2330706-2330807:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2272191-2272307:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2260824-2260991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2187972-2188069:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2163009-2163128:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2110498-2110627:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2055941-2056186:-1:exon

position:2055941:-1
position: 2055941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2056186:-1
position: 2056186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2054403-2054497:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2053389-2053410:-1:exon

LOC115079790
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115079790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2262476..2263582
location: region:2262476-2263582:1
so has part: feature:2262476-2263582:1:exon

115079790
type: Gene
SIO_000068: ncbigene

position:2262476:1
position: 2262476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2263582:1
position: 2263582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2262476-2263582:1:exon

LOC115079790
type: Exon
subclass of: SO_0000147
RO_0002162: 194408
gene: LOC115079790
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115079790
subclass of: SO_0000673
so part of: LOC115079790
location: 2262476..2262631
location: region:2262476-2262631:1
so has part: feature:2262476-2262631:1:exon

position:2262631:1
position: 2262631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2262476-2262631:1:exon

LOC115079790
type: Exon
subclass of: SO_0000147
RO_0002162: 194408
gene: LOC115079790
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115079790
subclass of: SO_0000673
so part of: LOC115079790
location: 2262729..2262737
location: region:2262729-2262737:1
so has part: feature:2262729-2262737:1:exon

position:2262729:1
position: 2262729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2262737:1
position: 2262737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2262729-2262737:1:exon

LOC115079790
type: Exon
subclass of: SO_0000147
RO_0002162: 194408
gene: LOC115079790
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115079790
subclass of: SO_0000673
so part of: LOC115079790
location: 2263258..2263582
location: region:2263258-2263582:1
so has part: feature:2263258-2263582:1:exon

position:2263258:1
position: 2263258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2263258-2263582:1:exon

HBEGF
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: HBEGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2764930..3015779
location: region:2764930-3015779:1
so has part: feature:2764930-3015779:1:exon
subclass of: SO_0000010

115079895
type: Gene
SIO_000068: ncbigene

position:2764930:1
position: 2764930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3015779:1
position: 3015779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2764930-3015779:1:exon

HBEGF
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 194408
gene: HBEGF
product: heparin binding EGF like growth factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003853434.1
SIO_010081: HBEGF
so part of: HBEGF
location: join(2764930..2765125,2765329..2765466,2766240..2766420,2833520..2833675,2859647..2859740,2928674..2928732,3013081..3015779)
location: region:2764930-3015779:1
so has part: feature:2764930-2765125:1:exon
so has part: feature:2765329-2765466:1:exon
so has part: feature:2766240-2766420:1:exon
so has part: feature:2833520-2833675:1:exon
so has part: feature:2859647-2859740:1:exon
so has part: feature:2928674-2928732:1:exon
so has part: feature:3013081-3015779:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2764930-2765125:1:exon

position:2765125:1
position: 2765125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2765329-2765466:1:exon

position:2765329:1
position: 2765329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2765466:1
position: 2765466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2766240-2766420:1:exon

position:2766240:1
position: 2766240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2766420:1
position: 2766420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2833520-2833675:1:exon

position:2833520:1
position: 2833520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2833675:1
position: 2833675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2859647-2859740:1:exon

position:2859647:1
position: 2859647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2859740:1
position: 2859740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2928674-2928732:1:exon

position:2928674:1
position: 2928674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2928732:1
position: 2928732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3013081-3015779:1:exon

position:3013081:1
position: 3013081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HBEGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: HBEGF
product: heparin binding EGF like growth factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029583844.1
SIO_010081: HBEGF
subclass of: SO_0000673
so part of: HBEGF
location: join(2764930..2765125,2765329..2765466,2766240..2766420,2833520..2833675,2859647..2859740,3013081..3015779)
location: region:2764930-3015779:1
so has part: feature:2764930-2765125:1:exon
so has part: feature:2765329-2765466:1:exon
so has part: feature:2766240-2766420:1:exon
so has part: feature:2833520-2833675:1:exon
so has part: feature:2859647-2859740:1:exon
so has part: feature:3013081-3015779:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2764930-2765125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765329-2765466:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2766240-2766420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2833520-2833675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2859647-2859740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3013081-3015779:1:exon

HBEGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: HBEGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proheparin-binding EGF-like growth factor
translation: MKVLTVTNVLLVAVSFIFVSGAAVGLQDEALSKDSGNSALRSNTEQRVSLAGDLIVRPPVAFSYKPQAVISSNKEENGRKKNRKGKGKGRKRDPCKKKYKDFCIHGECKYINVLKMPSCICQLGYHGERCHGLILPLENPSSDYDHTTALAVLAVVLSSVCLIIIAALLLLRYHRRGIYDVENEEKVKLGTSPGH
SIO_010081: HBEGF
subclass of: SO_0000673
so part of: HBEGF
location: join(2765086..2765125,2765329..2765466,2766240..2766420,2833520..2833675,2859647..2859719)
location: region:2765086-2859719:1
so has part: feature:2765086-2765125:1:exon
so has part: feature:2765329-2765466:1:exon
so has part: feature:2766240-2766420:1:exon
so has part: feature:2833520-2833675:1:exon
so has part: feature:2859647-2859719:1:exon

XP_029439704.1
type: Protein
SIO_000068: ncbiprotein

position:2765086:1
position: 2765086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2859719:1
position: 2859719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2765086-2765125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765329-2765466:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2766240-2766420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2833520-2833675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2859647-2859719:1:exon

PFDN1
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: PFDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3043851..3359759
location: region:3043851-3359759:1
so has part: feature:3043851-3359759:1:exon
subclass of: SO_0000010

115079787
type: Gene
SIO_000068: ncbigene

position:3043851:1
position: 3043851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3359759:1
position: 3359759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3043851-3359759:1:exon

PFDN1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 194408
gene: PFDN1
product: prefoldin subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_003853383.1
SIO_010081: PFDN1
so part of: PFDN1
location: join(3043851..3044145,3142707..3142873,3263684..3263768,3338994..3339337,3339427..3339602)
location: region:3043851-3339602:1
so has part: feature:3043851-3044145:1:exon
so has part: feature:3142707-3142873:1:exon
so has part: feature:3263684-3263768:1:exon
so has part: feature:3338994-3339337:1:exon
so has part: feature:3339427-3339602:1:exon

position:3339602:1
position: 3339602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3043851-3044145:1:exon

position:3044145:1
position: 3044145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3142707-3142873:1:exon

position:3142707:1
position: 3142707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3142873:1
position: 3142873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3263684-3263768:1:exon

position:3263684:1
position: 3263684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3263768:1
position: 3263768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3338994-3339337:1:exon

position:3338994:1
position: 3338994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3339337:1
position: 3339337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3339427-3339602:1:exon

position:3339427:1
position: 3339427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PFDN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: PFDN1
product: prefoldin subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_029583638.1
SIO_010081: PFDN1
subclass of: SO_0000673
so part of: PFDN1
location: join(3043865..3044145,3142707..3142873,3263684..3263768,3359446..3359759)
location: region:3043865-3359759:1
so has part: feature:3043865-3044145:1:exon
so has part: feature:3142707-3142873:1:exon
so has part: feature:3263684-3263768:1:exon
so has part: feature:3359446-3359759:1:exon

position:3043865:1
position: 3043865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3043865-3044145:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3142707-3142873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3263684-3263768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3359446-3359759:1:exon

position:3359446:1
position: 3359446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PFDN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: PFDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prefoldin subunit 1 isoform X1
translation: MAAPVDLELKKAFTELQAKVIDTQQKMKLADIQIEQLNRTIKHAHLTDSEILTLSDETRMYEGVGRMFILQSKSGIHSQLLEKQKVAEEKIKELEQRKSYLERSVKDAEDNIREMLMARRAQ
SIO_010081: PFDN1
subclass of: SO_0000673
so part of: PFDN1
location: join(3044113..3044145,3142707..3142873,3263684..3263768,3359446..3359529)
location: region:3044113-3359529:1
so has part: feature:3044113-3044145:1:exon
so has part: feature:3142707-3142873:1:exon
so has part: feature:3263684-3263768:1:exon
so has part: feature:3359446-3359529:1:exon

XP_029439498.1
type: Protein
SIO_000068: ncbiprotein

position:3044113:1
position: 3044113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3359529:1
position: 3359529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3044113-3044145:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3142707-3142873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3263684-3263768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3359446-3359529:1:exon

PFDN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: PFDN1
product: prefoldin subunit 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_029583639.1
SIO_010081: PFDN1
subclass of: SO_0000673
so part of: PFDN1
location: join(3044182..3044315,3142707..3142873,3263684..3263768,3359446..3359759)
location: region:3044182-3359759:1
so has part: feature:3044182-3044315:1:exon
so has part: feature:3142707-3142873:1:exon
so has part: feature:3263684-3263768:1:exon
so has part: feature:3359446-3359759:1:exon

position:3044182:1
position: 3044182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3044182-3044315:1:exon

position:3044315:1
position: 3044315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3142707-3142873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3263684-3263768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3359446-3359759:1:exon

PFDN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: PFDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prefoldin subunit 1 isoform X2
translation: MQAFTELQAKVIDTQQKMKLADIQIEQLNRTIKHAHLTDSEILTLSDETRMYEGVGRMFILQSKSGIHSQLLEKQKVAEEKIKELEQRKSYLERSVKDAEDNIREMLMARRAQ
SIO_010081: PFDN1
subclass of: SO_0000673
so part of: PFDN1
location: join(3044310..3044315,3142707..3142873,3263684..3263768,3359446..3359529)
location: region:3044310-3359529:1
so has part: feature:3044310-3044315:1:exon
so has part: feature:3142707-3142873:1:exon
so has part: feature:3263684-3263768:1:exon
so has part: feature:3359446-3359529:1:exon

XP_029439499.1
type: Protein
SIO_000068: ncbiprotein

position:3044310:1
position: 3044310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3044310-3044315:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3142707-3142873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3263684-3263768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3359446-3359529:1:exon

PAIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3458590..3901652)
location: region:3458590-3901652:-1
so has part: feature:3458590-3901652:-1:exon
subclass of: SO_0000010

115079939
type: Gene
SIO_000068: ncbigene

position:3458590:-1
position: 3458590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3901652:-1
position: 3901652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3458590-3901652:-1:exon

PAIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: PAIP2
product: poly(A) binding protein interacting protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_029583907.1
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: complement(join(3458590..3459711,3514858..3515037,3670046..3670207,3901539..3901652))
location: region:3458590-3901652:-1
so has part: feature:3901539-3901652:-1:exon
so has part: feature:3670046-3670207:-1:exon
so has part: feature:3514858-3515037:-1:exon
so has part: feature:3458590-3459711:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3901539-3901652:-1:exon

position:3901539:-1
position: 3901539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3670046-3670207:-1:exon

position:3670046:-1
position: 3670046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3670207:-1
position: 3670207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3514858-3515037:-1:exon

position:3514858:-1
position: 3514858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3515037:-1
position: 3515037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3458590-3459711:-1:exon

position:3459711:-1
position: 3459711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAIP2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 194408
gene: PAIP2
product: poly(A) binding protein interacting protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003853456.1
SIO_010081: PAIP2
so part of: PAIP2
location: complement(join(3458590..3459711,3514858..3515037,3670046..3670207,3670328..3670350))
location: region:3458590-3670350:-1
so has part: feature:3670328-3670350:-1:exon
so has part: feature:3670046-3670207:-1:exon
so has part: feature:3514858-3515037:-1:exon
so has part: feature:3458590-3459711:-1:exon

position:3670350:-1
position: 3670350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3670328-3670350:-1:exon

position:3670328:-1
position: 3670328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3670046-3670207:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3514858-3515037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3458590-3459711:-1:exon

PAIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: PAIP2
product: poly(A) binding protein interacting protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_029583906.1
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: complement(join(3458590..3459711,3514858..3515037,3534860..3534962))
location: region:3458590-3534962:-1
so has part: feature:3534860-3534962:-1:exon
so has part: feature:3514858-3515037:-1:exon
so has part: feature:3458590-3459711:-1:exon

position:3534962:-1
position: 3534962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3534860-3534962:-1:exon

position:3534860:-1
position: 3534860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3514858-3515037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3458590-3459711:-1:exon

PAIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein-interacting protein 2 isoform X2
translation: MKKSFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVITDSSSMEDLAVKSNLNPNAKEFVPGVKY
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: complement(join(3459655..3459711,3514858..3515037,3670046..3670069))
location: region:3459655-3670069:-1
so has part: feature:3670046-3670069:-1:exon
so has part: feature:3514858-3515037:-1:exon
so has part: feature:3459655-3459711:-1:exon

XP_029439767.1
type: Protein
SIO_000068: ncbiprotein

position:3459655:-1
position: 3459655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3670069:-1
position: 3670069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3670046-3670069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3514858-3515037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3459655-3459711:-1:exon

PAIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein-interacting protein 2 isoform X1
translation: MRVGVQSLERHLGNLRIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVITDSSSMEDLAVKSNLNPNAKEFVPGVKY
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: complement(join(3459655..3459711,3514858..3515037,3534860..3534907))
location: region:3459655-3534907:-1
so has part: feature:3534860-3534907:-1:exon
so has part: feature:3514858-3515037:-1:exon
so has part: feature:3459655-3459711:-1:exon

XP_029439766.1
type: Protein
SIO_000068: ncbiprotein

position:3534907:-1
position: 3534907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3534860-3534907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3514858-3515037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3459655-3459711:-1:exon

LOC115080097
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115080097
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4066041..4066146)
location: region:4066041-4066146:-1
so has part: feature:4066041-4066146:-1:exon
subclass of: SO_0000623

115080097
type: Gene
SIO_000068: ncbigene

position:4066041:-1
position: 4066041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4066146:-1
position: 4066146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4066041-4066146:-1:exon

LOC115080097
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: snRNA
gene: LOC115080097
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003853518.1
SIO_010081: LOC115080097
subclass of: SO_0000673
so part of: LOC115080097
location: complement(4066041..4066146)
location: region:4066041-4066146:-1
so has part: feature:4066041-4066146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4066041-4066146:-1:exon

MATR3
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4087443..4456077)
location: region:4087443-4456077:-1
so has part: feature:4087443-4456077:-1:exon
subclass of: SO_0000010

115079962
type: Gene
SIO_000068: ncbigene

position:4087443:-1
position: 4087443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4456077:-1
position: 4456077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4087443-4456077:-1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: MATR3
product: matrin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029583949.1
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: complement(join(4087443..4088269,4102279..4102400,4133519..4133780,4133955..4134318,4135298..4135320,4135562..4135585,4165790..4165921,4180545..4180712,4191948..4192072,4264822..4264948,4287418..4287470,4318580..4318704,4338680..4338715,4360437..4360498,4422824..4423890,4424594..4424641,4455970..4456077))
location: region:4087443-4456077:-1
so has part: feature:4455970-4456077:-1:exon
so has part: feature:4424594-4424641:-1:exon
so has part: feature:4422824-4423890:-1:exon
so has part: feature:4360437-4360498:-1:exon
so has part: feature:4338680-4338715:-1:exon
so has part: feature:4318580-4318704:-1:exon
so has part: feature:4287418-4287470:-1:exon
so has part: feature:4264822-4264948:-1:exon
so has part: feature:4191948-4192072:-1:exon
so has part: feature:4180545-4180712:-1:exon
so has part: feature:4165790-4165921:-1:exon
so has part: feature:4135562-4135585:-1:exon
so has part: feature:4135298-4135320:-1:exon
so has part: feature:4133955-4134318:-1:exon
so has part: feature:4133519-4133780:-1:exon
so has part: feature:4102279-4102400:-1:exon
so has part: feature:4087443-4088269:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4455970-4456077:-1:exon

position:4455970:-1
position: 4455970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4424594-4424641:-1:exon

position:4424594:-1
position: 4424594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4424641:-1
position: 4424641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4422824-4423890:-1:exon

position:4422824:-1
position: 4422824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4423890:-1
position: 4423890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4360437-4360498:-1:exon

position:4360437:-1
position: 4360437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4360498:-1
position: 4360498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4338680-4338715:-1:exon

position:4338680:-1
position: 4338680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4338715:-1
position: 4338715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4318580-4318704:-1:exon

position:4318580:-1
position: 4318580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4318704:-1
position: 4318704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4287418-4287470:-1:exon

position:4287418:-1
position: 4287418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4287470:-1
position: 4287470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4264822-4264948:-1:exon

position:4264822:-1
position: 4264822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4264948:-1
position: 4264948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4191948-4192072:-1:exon

position:4191948:-1
position: 4191948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4192072:-1
position: 4192072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4180545-4180712:-1:exon

position:4180545:-1
position: 4180545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4180712:-1
position: 4180712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4165790-4165921:-1:exon

position:4165790:-1
position: 4165790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4165921:-1
position: 4165921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4135562-4135585:-1:exon

position:4135562:-1
position: 4135562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4135585:-1
position: 4135585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4135298-4135320:-1:exon

position:4135298:-1
position: 4135298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4135320:-1
position: 4135320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4133955-4134318:-1:exon

position:4133955:-1
position: 4133955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4134318:-1
position: 4134318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4133519-4133780:-1:exon

position:4133519:-1
position: 4133519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4133780:-1
position: 4133780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4102279-4102400:-1:exon

position:4102279:-1
position: 4102279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4102400:-1
position: 4102400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4087443-4088269:-1:exon

position:4088269:-1
position: 4088269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3
translation: MSKSFQPSSLSRDSQVHGRDLSAGIGLLAAATQSLSMPASLGRMTQGTARLASLMNLGMSSSLNQQGSHTLSSASASHNLPSIFSIGNRSHPPLTSQHRGDPDQATNILASFGLSSRDLDDLSHFPEDKITPENLPQLLLQLKRRRAEEISSLGYGREGRSVSREQPFRVPRDDWEESRSFRRDSFEDRGSGLNPVVEYDHGSRSQESGYYDRMDYEDDRLRDRERGREDSFYPETSHSYRKFDSDYDRMGRGPVQERSLFEKKRGSPPSSNVEDFHGYLPKGYPHLCSICDMPVHSNKEWNQHINGPTHRRRCQLLLEIYPDWNPDSGHGMGDPFMLQQSTNPAPGILGPPPPSIHMEGMQGGHGHGPRGHMGAGNGDMPGPRHMQKSRADTSRVVHIMDFQRGKNLRYQLLQLCEPFGVIVNHLILNKMNEALLKMSNSDDALAVVDYYTTSPALVFGQPVRVHLSQKYKRIKKPEAKTDPNAEPKPELGRVIHLSNLPHSGYSDSAIIKLIEPFGKINTYILMRMKSQAFVEMEKREDAMAMVAHCEKKPLWFQGKSVQVDVSEKYKKLVPRIPNKGLETLLEQDSSRKRTHSPDSKDGASDKKSPKLEGSQKSDGANGKSTKDEKQSGTTDGDTSETKGCKQAEGMPPAIESEDELLMEEEEAAALLESSSSVGYDGDQANMADVGTEETKEETENATSETAKKKLKKHQNRFPGNMEGFVTLDEVGDEEELNGQKTGRNAKTRRIAKRSKGAEAVEKGQTPDASIKEDMEMSSLALSAMPEEYMIGPYQPNNPIGVEYVVPRTGFYCKLCSLFYTNEEVAKTTHCSSLSHYQKLKKALNKKTEEHQPKEEAKEA
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: complement(join(4088210..4088269,4102279..4102400,4133519..4133780,4133955..4134318,4135298..4135320,4135562..4135585,4165790..4165921,4180545..4180712,4191948..4192072,4264822..4264948,4287418..4287470,4318580..4318704,4338680..4338715,4360437..4360498,4422824..4423720))
location: region:4088210-4423720:-1
so has part: feature:4422824-4423720:-1:exon
so has part: feature:4360437-4360498:-1:exon
so has part: feature:4338680-4338715:-1:exon
so has part: feature:4318580-4318704:-1:exon
so has part: feature:4287418-4287470:-1:exon
so has part: feature:4264822-4264948:-1:exon
so has part: feature:4191948-4192072:-1:exon
so has part: feature:4180545-4180712:-1:exon
so has part: feature:4165790-4165921:-1:exon
so has part: feature:4135562-4135585:-1:exon
so has part: feature:4135298-4135320:-1:exon
so has part: feature:4133955-4134318:-1:exon
so has part: feature:4133519-4133780:-1:exon
so has part: feature:4102279-4102400:-1:exon
so has part: feature:4088210-4088269:-1:exon

XP_029439809.1
type: Protein
SIO_000068: ncbiprotein

position:4088210:-1
position: 4088210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4423720:-1
position: 4423720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4422824-4423720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4360437-4360498:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4338680-4338715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4318580-4318704:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4287418-4287470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4264822-4264948:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4191948-4192072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4180545-4180712:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4165790-4165921:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4135562-4135585:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4135298-4135320:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4133955-4134318:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4133519-4133780:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4102279-4102400:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4088210-4088269:-1:exon

SLC23A1
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: SLC23A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4576536..5473154
location: region:4576536-5473154:1
so has part: feature:4576536-5473154:1:exon
subclass of: SO_0000010

115079640
type: Gene
SIO_000068: ncbigene

position:4576536:1
position: 4576536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5473154:1
position: 5473154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4576536-5473154:1:exon

SLC23A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: SLC23A1
product: solute carrier family 23 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029583351.1
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: join(4576536..4576651,4782952..4783065,4877465..4877622,4879369..4879457,4909212..4909279,4935575..4935756,5030244..5030364,5030451..5030607,5107583..5107730,5156570..5156675,5275447..5275576,5322597..5322740,5393372..5393467,5471973..5473154)
location: region:4576536-5473154:1
so has part: feature:4576536-4576651:1:exon
so has part: feature:4782952-4783065:1:exon
so has part: feature:4877465-4877622:1:exon
so has part: feature:4879369-4879457:1:exon
so has part: feature:4909212-4909279:1:exon
so has part: feature:4935575-4935756:1:exon
so has part: feature:5030244-5030364:1:exon
so has part: feature:5030451-5030607:1:exon
so has part: feature:5107583-5107730:1:exon
so has part: feature:5156570-5156675:1:exon
so has part: feature:5275447-5275576:1:exon
so has part: feature:5322597-5322740:1:exon
so has part: feature:5393372-5393467:1:exon
so has part: feature:5471973-5473154:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4576536-4576651:1:exon

position:4576651:1
position: 4576651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4782952-4783065:1:exon

position:4782952:1
position: 4782952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4783065:1
position: 4783065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4877465-4877622:1:exon

position:4877465:1
position: 4877465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4877622:1
position: 4877622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4879369-4879457:1:exon

position:4879369:1
position: 4879369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4879457:1
position: 4879457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4909212-4909279:1:exon

position:4909212:1
position: 4909212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4909279:1
position: 4909279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4935575-4935756:1:exon

position:4935575:1
position: 4935575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4935756:1
position: 4935756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5030244-5030364:1:exon

position:5030244:1
position: 5030244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5030364:1
position: 5030364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5030451-5030607:1:exon

position:5030451:1
position: 5030451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5030607:1
position: 5030607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5107583-5107730:1:exon

position:5107583:1
position: 5107583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5107730:1
position: 5107730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5156570-5156675:1:exon

position:5156570:1
position: 5156570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5156675:1
position: 5156675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5275447-5275576:1:exon

position:5275447:1
position: 5275447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5275576:1
position: 5275576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5322597-5322740:1:exon

position:5322597:1
position: 5322597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5322740:1
position: 5322740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5393372-5393467:1:exon

position:5393372:1
position: 5393372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5393467:1
position: 5393467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5471973-5473154:1:exon

position:5471973:1
position: 5471973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC23A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: SLC23A1
product: solute carrier family 23 member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029583353.1
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: join(4576536..4576651,4782952..4783065,4877465..4877622,4879369..4879457,4909212..4909279,4935575..4935756,5030244..5030364,5030451..5030607,5107583..5107730,5156570..5156675,5275447..5275576,5322597..5322740,5471973..5473154)
location: region:4576536-5473154:1
so has part: feature:4576536-4576651:1:exon
so has part: feature:4782952-4783065:1:exon
so has part: feature:4877465-4877622:1:exon
so has part: feature:4879369-4879457:1:exon
so has part: feature:4909212-4909279:1:exon
so has part: feature:4935575-4935756:1:exon
so has part: feature:5030244-5030364:1:exon
so has part: feature:5030451-5030607:1:exon
so has part: feature:5107583-5107730:1:exon
so has part: feature:5156570-5156675:1:exon
so has part: feature:5275447-5275576:1:exon
so has part: feature:5322597-5322740:1:exon
so has part: feature:5471973-5473154:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4576536-4576651:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4782952-4783065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4877465-4877622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4879369-4879457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4909212-4909279:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4935575-4935756:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5030244-5030364:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5030451-5030607:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5107583-5107730:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5156570-5156675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5275447-5275576:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5322597-5322740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5471973-5473154:1:exon

SLC23A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: SLC23A1
product: solute carrier family 23 member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029583352.1
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: join(4782044..4782650,4782952..4783065,4877465..4877622,4879369..4879457,4909212..4909279,4935575..4935756,5030244..5030364,5030451..5030607,5107583..5107730,5156570..5156675,5275447..5275576,5322597..5322740,5393372..5393467,5471973..5473154)
location: region:4782044-5473154:1
so has part: feature:4782044-4782650:1:exon
so has part: feature:4782952-4783065:1:exon
so has part: feature:4877465-4877622:1:exon
so has part: feature:4879369-4879457:1:exon
so has part: feature:4909212-4909279:1:exon
so has part: feature:4935575-4935756:1:exon
so has part: feature:5030244-5030364:1:exon
so has part: feature:5030451-5030607:1:exon
so has part: feature:5107583-5107730:1:exon
so has part: feature:5156570-5156675:1:exon
so has part: feature:5275447-5275576:1:exon
so has part: feature:5322597-5322740:1:exon
so has part: feature:5393372-5393467:1:exon
so has part: feature:5471973-5473154:1:exon

position:4782044:1
position: 4782044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4782044-4782650:1:exon

position:4782650:1
position: 4782650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4782952-4783065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4877465-4877622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4879369-4879457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4909212-4909279:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4935575-4935756:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5030244-5030364:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5030451-5030607:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5107583-5107730:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5156570-5156675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5275447-5275576:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5322597-5322740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5393372-5393467:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5471973-5473154:1:exon

SLC23A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: SLC23A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 23 member 1 isoform X1
translation: MRQPALPEQRGSDLIYKIEDVPPWYLCILLGFQHYLTCFSGTIAIPFLLAEALCVGKDQITISQLIGTIFTGVGITTLIQTTIGIRLPLFQASAFAFLVPAKAILALDKWKCPPDAEIYKNWTEPLNTSHIWQPRIREIQGAIIVSSTVEVFIGLVGLPGVLLNYVGPLTVTPTISLIGLSVFQAAGERAGSHWGISVLSMFLIIVFAQYLRNMSILLPGYKWGKGFIAVRLQIFKLFPIVLAIMLVWLLCYILTITNVFSSDTKSYGYKARTDARGEIMSSAPWFRFPFPCQWGLPTITIAGVLGMFSATVAGIIESIGDYYACARLAGAPAPPVHAINRGIFIEGISCIITGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIMFLLGTVGKFTALFASIPDPILGGMFCVLFGMITAIGLSNLQFVDMNSSRNLFVLGFSMFLGLALPTFLESHPNTINTGILEVDQILTVLLTTEMFVGGCIAFVMDNTMPGTAEERGLVQWKAGAHADRELCQDVHSYDFPFGMNLVKKFQSFKYVPICPVFKGYHFQKTSKKSVIINNIMHNSCNNNHAIENVQENQEINVICTKV
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: join(4782967..4783065,4877465..4877622,4879369..4879457,4909212..4909279,4935575..4935756,5030244..5030364,5030451..5030607,5107583..5107730,5156570..5156675,5275447..5275576,5322597..5322740,5393372..5393467,5471973..5472265)
location: region:4782967-5472265:1
so has part: feature:4782967-4783065:1:exon
so has part: feature:4877465-4877622:1:exon
so has part: feature:4879369-4879457:1:exon
so has part: feature:4909212-4909279:1:exon
so has part: feature:4935575-4935756:1:exon
so has part: feature:5030244-5030364:1:exon
so has part: feature:5030451-5030607:1:exon
so has part: feature:5107583-5107730:1:exon
so has part: feature:5156570-5156675:1:exon
so has part: feature:5275447-5275576:1:exon
so has part: feature:5322597-5322740:1:exon
so has part: feature:5393372-5393467:1:exon
so has part: feature:5471973-5472265:1:exon

XP_029439211.1
type: Protein
SIO_000068: ncbiprotein

position:4782967:1
position: 4782967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5472265:1
position: 5472265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4782967-4783065:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4877465-4877622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4879369-4879457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4909212-4909279:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4935575-4935756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5030244-5030364:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5030451-5030607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5107583-5107730:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5156570-5156675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5275447-5275576:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5322597-5322740:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5393372-5393467:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5471973-5472265:1:exon

SLC23A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: SLC23A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 23 member 1 isoform X1
translation: MRQPALPEQRGSDLIYKIEDVPPWYLCILLGFQHYLTCFSGTIAIPFLLAEALCVGKDQITISQLIGTIFTGVGITTLIQTTIGIRLPLFQASAFAFLVPAKAILALDKWKCPPDAEIYKNWTEPLNTSHIWQPRIREIQGAIIVSSTVEVFIGLVGLPGVLLNYVGPLTVTPTISLIGLSVFQAAGERAGSHWGISVLSMFLIIVFAQYLRNMSILLPGYKWGKGFIAVRLQIFKLFPIVLAIMLVWLLCYILTITNVFSSDTKSYGYKARTDARGEIMSSAPWFRFPFPCQWGLPTITIAGVLGMFSATVAGIIESIGDYYACARLAGAPAPPVHAINRGIFIEGISCIITGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIMFLLGTVGKFTALFASIPDPILGGMFCVLFGMITAIGLSNLQFVDMNSSRNLFVLGFSMFLGLALPTFLESHPNTINTGILEVDQILTVLLTTEMFVGGCIAFVMDNTMPGTAEERGLVQWKAGAHADRELCQDVHSYDFPFGMNLVKKFQSFKYVPICPVFKGYHFQKTSKKSVIINNIMHNSCNNNHAIENVQENQEINVICTKV
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: join(4782967..4783065,4877465..4877622,4879369..4879457,4909212..4909279,4935575..4935756,5030244..5030364,5030451..5030607,5107583..5107730,5156570..5156675,5275447..5275576,5322597..5322740,5393372..5393467,5471973..5472265)
location: region:4782967-5472265:1
so has part: feature:4782967-4783065:1:exon
so has part: feature:4877465-4877622:1:exon
so has part: feature:4879369-4879457:1:exon
so has part: feature:4909212-4909279:1:exon
so has part: feature:4935575-4935756:1:exon
so has part: feature:5030244-5030364:1:exon
so has part: feature:5030451-5030607:1:exon
so has part: feature:5107583-5107730:1:exon
so has part: feature:5156570-5156675:1:exon
so has part: feature:5275447-5275576:1:exon
so has part: feature:5322597-5322740:1:exon
so has part: feature:5393372-5393467:1:exon
so has part: feature:5471973-5472265:1:exon

XP_029439212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4782967-4783065:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4877465-4877622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4879369-4879457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4909212-4909279:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4935575-4935756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5030244-5030364:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5030451-5030607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5107583-5107730:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5156570-5156675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5275447-5275576:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5322597-5322740:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5393372-5393467:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5471973-5472265:1:exon

SLC23A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: SLC23A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 23 member 1 isoform X2
translation: MRQPALPEQRGSDLIYKIEDVPPWYLCILLGFQHYLTCFSGTIAIPFLLAEALCVGKDQITISQLIGTIFTGVGITTLIQTTIGIRLPLFQASAFAFLVPAKAILALDKWKCPPDAEIYKNWTEPLNTSHIWQPRIREIQGAIIVSSTVEVFIGLVGLPGVLLNYVGPLTVTPTISLIGLSVFQAAGERAGSHWGISVLSMFLIIVFAQYLRNMSILLPGYKWGKGFIAVRLQIFKLFPIVLAIMLVWLLCYILTITNVFSSDTKSYGYKARTDARGEIMSSAPWFRFPFPCQWGLPTITIAGVLGMFSATVAGIIESIGDYYACARLAGAPAPPVHAINRGIFIEGISCIITGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIMFLLGTVGKFTALFASIPDPILGGMFCVLFGMITAIGLSNLQFVDMNSSRNLFVLGFSMFLGLALPTFLESHPNTINTGTAEERGLVQWKAGAHADRELCQDVHSYDFPFGMNLVKKFQSFKYVPICPVFKGYHFQKTSKKSVIINNIMHNSCNNNHAIENVQENQEINVICTKV
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: join(4782967..4783065,4877465..4877622,4879369..4879457,4909212..4909279,4935575..4935756,5030244..5030364,5030451..5030607,5107583..5107730,5156570..5156675,5275447..5275576,5322597..5322740,5471973..5472265)
location: region:4782967-5472265:1
so has part: feature:4782967-4783065:1:exon
so has part: feature:4877465-4877622:1:exon
so has part: feature:4879369-4879457:1:exon
so has part: feature:4909212-4909279:1:exon
so has part: feature:4935575-4935756:1:exon
so has part: feature:5030244-5030364:1:exon
so has part: feature:5030451-5030607:1:exon
so has part: feature:5107583-5107730:1:exon
so has part: feature:5156570-5156675:1:exon
so has part: feature:5275447-5275576:1:exon
so has part: feature:5322597-5322740:1:exon
so has part: feature:5471973-5472265:1:exon

XP_029439213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4782967-4783065:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4877465-4877622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4879369-4879457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4909212-4909279:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4935575-4935756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5030244-5030364:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5030451-5030607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5107583-5107730:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5156570-5156675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5275447-5275576:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5322597-5322740:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5471973-5472265:1:exon

LOC115079641
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115079641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5043586..5045075)
location: region:5043586-5045075:-1
so has part: feature:5043586-5045075:-1:exon
subclass of: SO_0000011

115079641
type: Gene
SIO_000068: ncbigene

position:5043586:-1
position: 5043586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5045075:-1
position: 5045075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5043586-5045075:-1:exon

LOC115079641
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115079641
product: uncharacterized LOC115079641
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_003853350.1
SIO_010081: LOC115079641
subclass of: SO_0000673
so part of: LOC115079641
location: complement(join(5043586..5043638,5044075..5044208,5045029..5045075))
location: region:5043586-5045075:-1
so has part: feature:5045029-5045075:-1:exon
so has part: feature:5044075-5044208:-1:exon
so has part: feature:5043586-5043638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5045029-5045075:-1:exon

position:5045029:-1
position: 5045029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5044075-5044208:-1:exon

position:5044075:-1
position: 5044075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5044208:-1
position: 5044208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5043586-5043638:-1:exon

position:5043638:-1
position: 5043638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ECSCR
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5527883..5809243)
location: region:5527883-5809243:-1
so has part: feature:5527883-5809243:-1:exon
subclass of: SO_0000010

115079929
type: Gene
SIO_000068: ncbigene

position:5527883:-1
position: 5527883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5809243:-1
position: 5809243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5527883-5809243:-1:exon

ECSCR
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 194408
gene: ECSCR
product: endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003853451.1
SIO_010081: ECSCR
so part of: ECSCR
location: complement(join(5527883..5528148,5540163..5540233,5540835..5540946,5570839..5570875,5628871..5628969,5630010..5630084,5744172..5744216,5808468..5809243))
location: region:5527883-5809243:-1
so has part: feature:5808468-5809243:-1:exon
so has part: feature:5744172-5744216:-1:exon
so has part: feature:5630010-5630084:-1:exon
so has part: feature:5628871-5628969:-1:exon
so has part: feature:5570839-5570875:-1:exon
so has part: feature:5540835-5540946:-1:exon
so has part: feature:5540163-5540233:-1:exon
so has part: feature:5527883-5528148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5808468-5809243:-1:exon

position:5808468:-1
position: 5808468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5744172-5744216:-1:exon

position:5744172:-1
position: 5744172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5744216:-1
position: 5744216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5630010-5630084:-1:exon

position:5630010:-1
position: 5630010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5630084:-1
position: 5630084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5628871-5628969:-1:exon

position:5628871:-1
position: 5628871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5628969:-1
position: 5628969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5570839-5570875:-1:exon

position:5570839:-1
position: 5570839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5570875:-1
position: 5570875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5540835-5540946:-1:exon

position:5540835:-1
position: 5540835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5540946:-1
position: 5540946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5540163-5540233:-1:exon

position:5540163:-1
position: 5540163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5540233:-1
position: 5540233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5527883-5528148:-1:exon

position:5528148:-1
position: 5528148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ECSCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: ECSCR
product: endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_029583892.1
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(5527883..5528148,5540163..5540230,5570839..5570875,5628871..5628969,5630010..5630084,5744172..5744216,5808468..5809238))
location: region:5527883-5809238:-1
so has part: feature:5808468-5809238:-1:exon
so has part: feature:5744172-5744216:-1:exon
so has part: feature:5630010-5630084:-1:exon
so has part: feature:5628871-5628969:-1:exon
so has part: feature:5570839-5570875:-1:exon
so has part: feature:5540163-5540230:-1:exon
so has part: feature:5527883-5528148:-1:exon

position:5809238:-1
position: 5809238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5808468-5809238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5744172-5744216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5630010-5630084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5628871-5628969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5570839-5570875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5540163-5540230:-1:exon

position:5540230:-1
position: 5540230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5527883-5528148:-1:exon

ECSCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: ECSCR
product: endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_029583893.1
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(5527883..5528148,5540163..5540233,5570839..5570875,5628871..5628969,5630010..5630084,5808468..5809233))
location: region:5527883-5809233:-1
so has part: feature:5808468-5809233:-1:exon
so has part: feature:5630010-5630084:-1:exon
so has part: feature:5628871-5628969:-1:exon
so has part: feature:5570839-5570875:-1:exon
so has part: feature:5540163-5540233:-1:exon
so has part: feature:5527883-5528148:-1:exon

position:5809233:-1
position: 5809233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5808468-5809233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5630010-5630084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5628871-5628969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5570839-5570875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5540163-5540233:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5527883-5528148:-1:exon

ECSCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: ECSCR
product: endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_029583891.1
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(5527883..5528148,5540163..5540233,5570839..5570875,5628871..5628969,5630010..5630084,5744172..5744216,5808468..5809232))
location: region:5527883-5809232:-1
so has part: feature:5808468-5809232:-1:exon
so has part: feature:5744172-5744216:-1:exon
so has part: feature:5630010-5630084:-1:exon
so has part: feature:5628871-5628969:-1:exon
so has part: feature:5570839-5570875:-1:exon
so has part: feature:5540163-5540233:-1:exon
so has part: feature:5527883-5528148:-1:exon

position:5809232:-1
position: 5809232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5808468-5809232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5744172-5744216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5630010-5630084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5628871-5628969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5570839-5570875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5540163-5540233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5527883-5528148:-1:exon

ECSCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: ECSCR
product: endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029583894.1
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(5527884..5528148,5540163..5540233,5570839..5570875,5628871..5628969,5630010..5630084,5744172..5744216,5749675..5749866))
location: region:5527884-5749866:-1
so has part: feature:5749675-5749866:-1:exon
so has part: feature:5744172-5744216:-1:exon
so has part: feature:5630010-5630084:-1:exon
so has part: feature:5628871-5628969:-1:exon
so has part: feature:5570839-5570875:-1:exon
so has part: feature:5540163-5540233:-1:exon
so has part: feature:5527884-5528148:-1:exon

position:5527884:-1
position: 5527884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5749866:-1
position: 5749866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5749675-5749866:-1:exon

position:5749675:-1
position: 5749675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5744172-5744216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5630010-5630084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5628871-5628969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5570839-5570875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5540163-5540233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5527884-5528148:-1:exon

ECSCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial cell-specific chemotaxis regulator isoform X3
translation: MESTTMPSLVWIVCWAMIKGVPQNEISVVPGRVNQTEPLTMVAFGGIIFIVILITGVIILVSVVSLRFKCKRSSDPEDKARAEGPVPMESSSMNNGEQSNITLIAMRSLNLDNAKLKSSQTTE
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(5528117..5528148,5540163..5540233,5570839..5570875,5628871..5628969,5630010..5630084,5808468..5808525))
location: region:5528117-5808525:-1
so has part: feature:5808468-5808525:-1:exon
so has part: feature:5630010-5630084:-1:exon
so has part: feature:5628871-5628969:-1:exon
so has part: feature:5570839-5570875:-1:exon
so has part: feature:5540163-5540233:-1:exon
so has part: feature:5528117-5528148:-1:exon

XP_029439753.1
type: Protein
SIO_000068: ncbiprotein

position:5528117:-1
position: 5528117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5808525:-1
position: 5808525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5808468-5808525:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5630010-5630084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5628871-5628969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5570839-5570875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5540163-5540233:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5528117-5528148:-1:exon

ECSCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial cell-specific chemotaxis regulator isoform X2
translation: MESTTMPSLVWIVCWAMIKDGTCTAENVSSSSIPGVPQNEISVVPGRVNQTEPLTMVAFGGIIFIVILITGVIILVSVVSLRFKCKRSSDPEDKARAEGPVPMESSMNNGEQSNITLIAMRSLNLDNAKLKSSQTTE
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(5528117..5528148,5540163..5540230,5570839..5570875,5628871..5628969,5630010..5630084,5744172..5744216,5808468..5808525))
location: region:5528117-5808525:-1
so has part: feature:5808468-5808525:-1:exon
so has part: feature:5744172-5744216:-1:exon
so has part: feature:5630010-5630084:-1:exon
so has part: feature:5628871-5628969:-1:exon
so has part: feature:5570839-5570875:-1:exon
so has part: feature:5540163-5540230:-1:exon
so has part: feature:5528117-5528148:-1:exon

XP_029439752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5808468-5808525:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5744172-5744216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5630010-5630084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5628871-5628969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5570839-5570875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5540163-5540230:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5528117-5528148:-1:exon

ECSCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial cell-specific chemotaxis regulator isoform X1
translation: MESTTMPSLVWIVCWAMIKDGTCTAENVSSSSIPGVPQNEISVVPGRVNQTEPLTMVAFGGIIFIVILITGVIILVSVVSLRFKCKRSSDPEDKARAEGPVPMESSSMNNGEQSNITLIAMRSLNLDNAKLKSSQTTE
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(5528117..5528148,5540163..5540233,5570839..5570875,5628871..5628969,5630010..5630084,5744172..5744216,5808468..5808525))
location: region:5528117-5808525:-1
so has part: feature:5808468-5808525:-1:exon
so has part: feature:5744172-5744216:-1:exon
so has part: feature:5630010-5630084:-1:exon
so has part: feature:5628871-5628969:-1:exon
so has part: feature:5570839-5570875:-1:exon
so has part: feature:5540163-5540233:-1:exon
so has part: feature:5528117-5528148:-1:exon

XP_029439751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5808468-5808525:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5744172-5744216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5630010-5630084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5628871-5628969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5570839-5570875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5540163-5540233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5528117-5528148:-1:exon

ECSCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial cell-specific chemotaxis regulator isoform X4
translation: MVAFGGIIFIVILITGVIILVSVVSLRFKCKRSSDPEDKARAEGPVPMESSSMNNGEQSNITLIAMRSLNLDNAKLKSSQTTE
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(5528117..5528148,5540163..5540233,5570839..5570875,5628871..5628969,5630010..5630022))
location: region:5528117-5630022:-1
so has part: feature:5630010-5630022:-1:exon
so has part: feature:5628871-5628969:-1:exon
so has part: feature:5570839-5570875:-1:exon
so has part: feature:5540163-5540233:-1:exon
so has part: feature:5528117-5528148:-1:exon

XP_029439754.1
type: Protein
SIO_000068: ncbiprotein

position:5630022:-1
position: 5630022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5630010-5630022:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5628871-5628969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5570839-5570875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5540163-5540233:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5528117-5528148:-1:exon

TMEM173
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: TMEM173
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5852964..6118151)
location: region:5852964-6118151:-1
so has part: feature:5852964-6118151:-1:exon
subclass of: SO_0000010

115079875
type: Gene
SIO_000068: ncbigene

position:5852964:-1
position: 5852964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6118151:-1
position: 6118151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5852964-6118151:-1:exon

TMEM173
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: TMEM173
product: transmembrane protein 173, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029583821.1
SIO_010081: TMEM173
subclass of: SO_0000673
so part of: TMEM173
location: complement(join(5852964..5854872,5875755..5875941,5876453..5876688,5879893..5880001,5904363..5904546,5981332..5981579,6114918..6115022,6115111..6115188))
location: region:5852964-6115188:-1
so has part: feature:6115111-6115188:-1:exon
so has part: feature:6114918-6115022:-1:exon
so has part: feature:5981332-5981579:-1:exon
so has part: feature:5904363-5904546:-1:exon
so has part: feature:5879893-5880001:-1:exon
so has part: feature:5876453-5876688:-1:exon
so has part: feature:5875755-5875941:-1:exon
so has part: feature:5852964-5854872:-1:exon

position:6115188:-1
position: 6115188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6115111-6115188:-1:exon

position:6115111:-1
position: 6115111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6114918-6115022:-1:exon

position:6114918:-1
position: 6114918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6115022:-1
position: 6115022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5981332-5981579:-1:exon

position:5981332:-1
position: 5981332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5981579:-1
position: 5981579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5904363-5904546:-1:exon

position:5904363:-1
position: 5904363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5904546:-1
position: 5904546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5879893-5880001:-1:exon

position:5879893:-1
position: 5879893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5880001:-1
position: 5880001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5876453-5876688:-1:exon

position:5876453:-1
position: 5876453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5876688:-1
position: 5876688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5875755-5875941:-1:exon

position:5875755:-1
position: 5875755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5875941:-1
position: 5875941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5852964-5854872:-1:exon

position:5854872:-1
position: 5854872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM173
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: TMEM173
product: transmembrane protein 173, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029583822.1
SIO_010081: TMEM173
subclass of: SO_0000673
so part of: TMEM173
location: complement(join(5852964..5854872,5875755..5875941,5876453..5876688,5879893..5880001,5904363..5904546,5981332..5981579,6003869..6003918))
location: region:5852964-6003918:-1
so has part: feature:6003869-6003918:-1:exon
so has part: feature:5981332-5981579:-1:exon
so has part: feature:5904363-5904546:-1:exon
so has part: feature:5879893-5880001:-1:exon
so has part: feature:5876453-5876688:-1:exon
so has part: feature:5875755-5875941:-1:exon
so has part: feature:5852964-5854872:-1:exon

position:6003918:-1
position: 6003918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6003869-6003918:-1:exon

position:6003869:-1
position: 6003869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5981332-5981579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5904363-5904546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5879893-5880001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5876453-5876688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5875755-5875941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5852964-5854872:-1:exon

TMEM173
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: TMEM173
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stimulator of interferon genes protein isoform X1
translation: MVSHMEGIPNVQSKDIIPKMRGCRDQYAVICAIILCFAISCVAGSTAYKSILVYFLLNCTGSLLVGFVKGLCDFFEESHHVQSRYQGQYSKAACACISVNQFLLLLCGCFLFLWTDMNSWTKLPIHVNIALVCSSQLLMIAVGLQHPTIVEISKICEKQKLNVAHGLAWSYFLGYLKLVLPNLEKAVCLFNKDNDNLLGTETCKLYILIPLSCRIHSNLSDVDSNIQFLKDLPALHIDRAGIKSRAYKNNIYSILDEDQRPYYCIVEYATPLLTLYEMSGITNAGFSSEDRLQQAKLFYRTLKEILESSLDCQNSYRLVVYEDCATSEDEAQNMDFLSLEILKHIRQQQRDGYSSEKNIAHTSLSIDSAEPELMLLF
SIO_010081: TMEM173
subclass of: SO_0000673
so part of: TMEM173
location: complement(join(5854706..5854872,5875755..5875941,5876453..5876688,5879893..5880001,5904363..5904546,5981332..5981579,6114918..6114920))
location: region:5854706-6114920:-1
so has part: feature:6114918-6114920:-1:exon
so has part: feature:5981332-5981579:-1:exon
so has part: feature:5904363-5904546:-1:exon
so has part: feature:5879893-5880001:-1:exon
so has part: feature:5876453-5876688:-1:exon
so has part: feature:5875755-5875941:-1:exon
so has part: feature:5854706-5854872:-1:exon

XP_029439681.1
type: Protein
SIO_000068: ncbiprotein

position:5854706:-1
position: 5854706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6114920:-1
position: 6114920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6114918-6114920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5981332-5981579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5904363-5904546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5879893-5880001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5876453-5876688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5875755-5875941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5854706-5854872:-1:exon

TMEM173
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: TMEM173
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stimulator of interferon genes protein isoform X2
translation: MEGIPNVQSKDIIPKMRGCRDQYAVICAIILCFAISCVAGSTAYKSILVYFLLNCTGSLLVGFVKGLCDFFEESHHVQSRYQGQYSKAACACISVNQFLLLLCGCFLFLWTDMNSWTKLPIHVNIALVCSSQLLMIAVGLQHPTIVEISKICEKQKLNVAHGLAWSYFLGYLKLVLPNLEKAVCLFNKDNDNLLGTETCKLYILIPLSCRIHSNLSDVDSNIQFLKDLPALHIDRAGIKSRAYKNNIYSILDEDQRPYYCIVEYATPLLTLYEMSGITNAGFSSEDRLQQAKLFYRTLKEILESSLDCQNSYRLVVYEDCATSEDEAQNMDFLSLEILKHIRQQQRDGYSSEKNIAHTSLSIDSAEPELMLLF
SIO_010081: TMEM173
subclass of: SO_0000673
so part of: TMEM173
location: complement(join(5854706..5854872,5875755..5875941,5876453..5876688,5879893..5880001,5904363..5904546,5981332..5981570))
location: region:5854706-5981570:-1
so has part: feature:5981332-5981570:-1:exon
so has part: feature:5904363-5904546:-1:exon
so has part: feature:5879893-5880001:-1:exon
so has part: feature:5876453-5876688:-1:exon
so has part: feature:5875755-5875941:-1:exon
so has part: feature:5854706-5854872:-1:exon

XP_029439682.1
type: Protein
SIO_000068: ncbiprotein

position:5981570:-1
position: 5981570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5981332-5981570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5904363-5904546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5879893-5880001:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5876453-5876688:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5875755-5875941:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5854706-5854872:-1:exon

TMEM173
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 194408
gene: TMEM173
product: transmembrane protein 173, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003853427.1
SIO_010081: TMEM173
so part of: TMEM173
location: complement(join(6056557..6057191,6057732..6057833,6058172..6058250,6106227..6106410,6114918..6115022,6118108..6118151))
location: region:6056557-6118151:-1
so has part: feature:6118108-6118151:-1:exon
so has part: feature:6114918-6115022:-1:exon
so has part: feature:6106227-6106410:-1:exon
so has part: feature:6058172-6058250:-1:exon
so has part: feature:6057732-6057833:-1:exon
so has part: feature:6056557-6057191:-1:exon

position:6056557:-1
position: 6056557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6118108-6118151:-1:exon

position:6118108:-1
position: 6118108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6114918-6115022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6106227-6106410:-1:exon

position:6106227:-1
position: 6106227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6106410:-1
position: 6106410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6058172-6058250:-1:exon

position:6058172:-1
position: 6058172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6058250:-1
position: 6058250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6057732-6057833:-1:exon

position:6057732:-1
position: 6057732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6057833:-1
position: 6057833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6056557-6057191:-1:exon

position:6057191:-1
position: 6057191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM173
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 194408
gene: TMEM173
product: transmembrane protein 173, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003853426.1
SIO_010081: TMEM173
so part of: TMEM173
location: complement(join(6056564..6057191,6057732..6057833,6058172..6058250,6114918..6115022,6115111..6115159))
location: region:6056564-6115159:-1
so has part: feature:6115111-6115159:-1:exon
so has part: feature:6114918-6115022:-1:exon
so has part: feature:6058172-6058250:-1:exon
so has part: feature:6057732-6057833:-1:exon
so has part: feature:6056564-6057191:-1:exon

position:6056564:-1
position: 6056564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6115159:-1
position: 6115159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6115111-6115159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6114918-6115022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6058172-6058250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6057732-6057833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6056564-6057191:-1:exon

TMEM173
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 194408
gene: TMEM173
product: transmembrane protein 173, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003853425.1
SIO_010081: TMEM173
so part of: TMEM173
location: complement(join(6056566..6057191,6057732..6057833,6058172..6058250,6114918..6115022,6118108..6118151))
location: region:6056566-6118151:-1
so has part: feature:6118108-6118151:-1:exon
so has part: feature:6114918-6115022:-1:exon
so has part: feature:6058172-6058250:-1:exon
so has part: feature:6057732-6057833:-1:exon
so has part: feature:6056566-6057191:-1:exon

position:6056566:-1
position: 6056566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6118108-6118151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6114918-6115022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6058172-6058250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6057732-6057833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6056566-6057191:-1:exon

UBE2D2
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: UBE2D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6263218..6854191
location: region:6263218-6854191:1
so has part: feature:6263218-6854191:1:exon
subclass of: SO_0000010

115079736
type: Gene
SIO_000068: ncbigene

position:6263218:1
position: 6263218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6854191:1
position: 6854191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6263218-6854191:1:exon

UBE2D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: UBE2D2
product: ubiquitin conjugating enzyme E2 D2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029583546.1
SIO_010081: UBE2D2
subclass of: SO_0000673
so part of: UBE2D2
location: join(6263218..6263492,6263864..6263902,6414302..6414365,6668626..6668657,6668741..6668818,6668906..6669011,6693711..6694384)
location: region:6263218-6694384:1
so has part: feature:6263218-6263492:1:exon
so has part: feature:6263864-6263902:1:exon
so has part: feature:6414302-6414365:1:exon
so has part: feature:6668626-6668657:1:exon
so has part: feature:6668741-6668818:1:exon
so has part: feature:6668906-6669011:1:exon
so has part: feature:6693711-6694384:1:exon

position:6694384:1
position: 6694384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6263218-6263492:1:exon

position:6263492:1
position: 6263492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6263864-6263902:1:exon

position:6263864:1
position: 6263864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6263902:1
position: 6263902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6414302-6414365:1:exon

position:6414302:1
position: 6414302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6414365:1
position: 6414365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6668626-6668657:1:exon

position:6668626:1
position: 6668626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6668657:1
position: 6668657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6668741-6668818:1:exon

position:6668741:1
position: 6668741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6668818:1
position: 6668818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6668906-6669011:1:exon

position:6668906:1
position: 6668906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6669011:1
position: 6669011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6693711-6694384:1:exon

position:6693711:1
position: 6693711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: UBE2D2
product: ubiquitin conjugating enzyme E2 D2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029583547.1
SIO_010081: UBE2D2
subclass of: SO_0000673
so part of: UBE2D2
location: join(6263218..6263492,6263864..6263902,6414302..6414365,6668626..6668657,6668741..6668818,6668906..6669011,6693348..6693625)
location: region:6263218-6693625:1
so has part: feature:6263218-6263492:1:exon
so has part: feature:6263864-6263902:1:exon
so has part: feature:6414302-6414365:1:exon
so has part: feature:6668626-6668657:1:exon
so has part: feature:6668741-6668818:1:exon
so has part: feature:6668906-6669011:1:exon
so has part: feature:6693348-6693625:1:exon

position:6693625:1
position: 6693625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6263218-6263492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6263864-6263902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6414302-6414365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6668626-6668657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6668741-6668818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6668906-6669011:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6693348-6693625:1:exon

position:6693348:1
position: 6693348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: UBE2D2
product: ubiquitin conjugating enzyme E2 D2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029583544.1
SIO_010081: UBE2D2
subclass of: SO_0000673
so part of: UBE2D2
location: join(6263242..6263492,6263864..6263902,6414302..6414365,6668626..6668657,6668741..6668818,6668906..6669011,6852252..6852345,6853353..6854191)
location: region:6263242-6854191:1
so has part: feature:6263242-6263492:1:exon
so has part: feature:6263864-6263902:1:exon
so has part: feature:6414302-6414365:1:exon
so has part: feature:6668626-6668657:1:exon
so has part: feature:6668741-6668818:1:exon
so has part: feature:6668906-6669011:1:exon
so has part: feature:6852252-6852345:1:exon
so has part: feature:6853353-6854191:1:exon

position:6263242:1
position: 6263242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6263242-6263492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6263864-6263902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6414302-6414365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6668626-6668657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6668741-6668818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6668906-6669011:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6852252-6852345:1:exon

position:6852252:1
position: 6852252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6852345:1
position: 6852345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6853353-6854191:1:exon

position:6853353:1
position: 6853353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: UBE2D2
product: ubiquitin conjugating enzyme E2 D2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_029583545.1
SIO_010081: UBE2D2
subclass of: SO_0000673
so part of: UBE2D2
location: join(6263246..6263492,6414302..6414365,6668626..6668657,6668741..6668818,6668906..6669011,6852252..6852345,6853353..6854191)
location: region:6263246-6854191:1
so has part: feature:6263246-6263492:1:exon
so has part: feature:6414302-6414365:1:exon
so has part: feature:6668626-6668657:1:exon
so has part: feature:6668741-6668818:1:exon
so has part: feature:6668906-6669011:1:exon
so has part: feature:6852252-6852345:1:exon
so has part: feature:6853353-6854191:1:exon

position:6263246:1
position: 6263246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6263246-6263492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6414302-6414365:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6668626-6668657:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6668741-6668818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6668906-6669011:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6852252-6852345:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6853353-6854191:1:exon

UBE2D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: UBE2D2
product: ubiquitin conjugating enzyme E2 D2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_029583549.1
SIO_010081: UBE2D2
subclass of: SO_0000673
so part of: UBE2D2
location: join(6263248..6263492,6293069..6293137,6414302..6414365,6514875..6515024,6668626..6668657,6668741..6668818,6668906..6669011,6852252..6852345,6853353..6854191)
location: region:6263248-6854191:1
so has part: feature:6263248-6263492:1:exon
so has part: feature:6293069-6293137:1:exon
so has part: feature:6414302-6414365:1:exon
so has part: feature:6514875-6515024:1:exon
so has part: feature:6668626-6668657:1:exon
so has part: feature:6668741-6668818:1:exon
so has part: feature:6668906-6669011:1:exon
so has part: feature:6852252-6852345:1:exon
so has part: feature:6853353-6854191:1:exon

position:6263248:1
position: 6263248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6263248-6263492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6293069-6293137:1:exon

position:6293069:1
position: 6293069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6293137:1
position: 6293137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6414302-6414365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6514875-6515024:1:exon

position:6514875:1
position: 6514875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6515024:1
position: 6515024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6668626-6668657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6668741-6668818:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6668906-6669011:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6852252-6852345:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6853353-6854191:1:exon

UBE2D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: UBE2D2
product: ubiquitin conjugating enzyme E2 D2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_029583548.1
SIO_010081: UBE2D2
subclass of: SO_0000673
so part of: UBE2D2
location: join(6263248..6263492,6293069..6293137,6414302..6414365,6668626..6668657,6668741..6668818,6668906..6669011,6852252..6852345,6853353..6854191)
location: region:6263248-6854191:1
so has part: feature:6263248-6263492:1:exon
so has part: feature:6293069-6293137:1:exon
so has part: feature:6414302-6414365:1:exon
so has part: feature:6668626-6668657:1:exon
so has part: feature:6668741-6668818:1:exon
so has part: feature:6668906-6669011:1:exon
so has part: feature:6852252-6852345:1:exon
so has part: feature:6853353-6854191:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6263248-6263492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6293069-6293137:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6414302-6414365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6668626-6668657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6668741-6668818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6668906-6669011:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6852252-6852345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6853353-6854191:1:exon

UBE2D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: UBE2D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 D2 isoform X1
translation: MALKRIHKAGRSGEGSCPCYQELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM
SIO_010081: UBE2D2
subclass of: SO_0000673
so part of: UBE2D2
location: join(6263469..6263492,6263864..6263902,6414302..6414365,6668626..6668657,6668741..6668818,6668906..6669011,6852252..6852345,6853353..6853398)
location: region:6263469-6853398:1
so has part: feature:6263469-6263492:1:exon
so has part: feature:6263864-6263902:1:exon
so has part: feature:6414302-6414365:1:exon
so has part: feature:6668626-6668657:1:exon
so has part: feature:6668741-6668818:1:exon
so has part: feature:6668906-6669011:1:exon
so has part: feature:6852252-6852345:1:exon
so has part: feature:6853353-6853398:1:exon

XP_029439404.1
type: Protein
SIO_000068: ncbiprotein

position:6263469:1
position: 6263469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6853398:1
position: 6853398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6263469-6263492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6263864-6263902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6414302-6414365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6668626-6668657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6668741-6668818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6668906-6669011:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6852252-6852345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6853353-6853398:1:exon

UBE2D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: UBE2D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 D2 isoform X2
translation: MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM
SIO_010081: UBE2D2
subclass of: SO_0000673
so part of: UBE2D2
location: join(6263469..6263492,6414302..6414365,6668626..6668657,6668741..6668818,6668906..6669011,6852252..6852345,6853353..6853398)
location: region:6263469-6853398:1
so has part: feature:6263469-6263492:1:exon
so has part: feature:6414302-6414365:1:exon
so has part: feature:6668626-6668657:1:exon
so has part: feature:6668741-6668818:1:exon
so has part: feature:6668906-6669011:1:exon
so has part: feature:6852252-6852345:1:exon
so has part: feature:6853353-6853398:1:exon

XP_029439405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6263469-6263492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6414302-6414365:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6668626-6668657:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6668741-6668818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6668906-6669011:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6852252-6852345:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6853353-6853398:1:exon

UBE2D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: UBE2D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 D2 isoform X3
translation: MALKRIHKAGRSGEGSCPCYQELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKEVYDGCIWLSVGALKQNKHSEEWRHYISSGSSC
SIO_010081: UBE2D2
subclass of: SO_0000673
so part of: UBE2D2
location: join(6263469..6263492,6263864..6263902,6414302..6414365,6668626..6668657,6668741..6668818,6668906..6669011,6693711..6693811)
location: region:6263469-6693811:1
so has part: feature:6263469-6263492:1:exon
so has part: feature:6263864-6263902:1:exon
so has part: feature:6414302-6414365:1:exon
so has part: feature:6668626-6668657:1:exon
so has part: feature:6668741-6668818:1:exon
so has part: feature:6668906-6669011:1:exon
so has part: feature:6693711-6693811:1:exon

XP_029439406.1
type: Protein
SIO_000068: ncbiprotein

position:6693811:1
position: 6693811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6263469-6263492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6263864-6263902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6414302-6414365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6668626-6668657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6668741-6668818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6668906-6669011:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6693711-6693811:1:exon

UBE2D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: UBE2D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 D2 isoform X4
translation: MALKRIHKAGRSGEGSCPCYQELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKALQVIMGQFFCFLAYRVLLFIWMGEETKTFH
SIO_010081: UBE2D2
subclass of: SO_0000673
so part of: UBE2D2
location: join(6263469..6263492,6263864..6263902,6414302..6414365,6668626..6668657,6668741..6668818,6668906..6669011,6693348..6693442)
location: region:6263469-6693442:1
so has part: feature:6263469-6263492:1:exon
so has part: feature:6263864-6263902:1:exon
so has part: feature:6414302-6414365:1:exon
so has part: feature:6668626-6668657:1:exon
so has part: feature:6668741-6668818:1:exon
so has part: feature:6668906-6669011:1:exon
so has part: feature:6693348-6693442:1:exon

XP_029439407.1
type: Protein
SIO_000068: ncbiprotein

position:6693442:1
position: 6693442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6263469-6263492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6263864-6263902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6414302-6414365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6668626-6668657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6668741-6668818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6668906-6669011:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6693348-6693442:1:exon

UBE2D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: UBE2D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 D2 isoform X5
translation: MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM
SIO_010081: UBE2D2
subclass of: SO_0000673
so part of: UBE2D2
location: join(6414365,6668626..6668657,6668741..6668818,6668906..6669011,6852252..6852345,6853353..6853398)
location: region:6414365-6853398:1
so has part: feature:6414365-6414365:1:exon
so has part: feature:6668626-6668657:1:exon
so has part: feature:6668741-6668818:1:exon
so has part: feature:6668906-6669011:1:exon
so has part: feature:6852252-6852345:1:exon
so has part: feature:6853353-6853398:1:exon

XP_029439408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6414365-6414365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6668626-6668657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6668741-6668818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6668906-6669011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6852252-6852345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6853353-6853398:1:exon

LOC115079737
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115079737
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6631320..6632377
location: region:6631320-6632377:1
so has part: feature:6631320-6632377:1:exon
subclass of: SO_0000011

115079737
type: Gene
SIO_000068: ncbigene

position:6631320:1
position: 6631320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6632377:1
position: 6632377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6631320-6632377:1:exon

LOC115079737
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115079737
product: uncharacterized LOC115079737
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003853359.1
SIO_010081: LOC115079737
subclass of: SO_0000673
so part of: LOC115079737
location: join(6631320..6631516,6631618..6631680,6631835..6632377)
location: region:6631320-6632377:1
so has part: feature:6631320-6631516:1:exon
so has part: feature:6631618-6631680:1:exon
so has part: feature:6631835-6632377:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6631320-6631516:1:exon

position:6631516:1
position: 6631516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6631618-6631680:1:exon

position:6631618:1
position: 6631618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6631680:1
position: 6631680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6631835-6632377:1:exon

position:6631835:1
position: 6631835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: UBE2D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 D2 isoform X6
translation: MGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM
SIO_010081: UBE2D2
subclass of: SO_0000673
so part of: UBE2D2
location: join(6668649..6668657,6668741..6668818,6668906..6669011,6852252..6852345,6853353..6853398)
location: region:6668649-6853398:1
so has part: feature:6668649-6668657:1:exon
so has part: feature:6668741-6668818:1:exon
so has part: feature:6668906-6669011:1:exon
so has part: feature:6852252-6852345:1:exon
so has part: feature:6853353-6853398:1:exon

XP_029439409.1
type: Protein
SIO_000068: ncbiprotein

position:6668649:1
position: 6668649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6668649-6668657:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6668741-6668818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6668906-6669011:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6852252-6852345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6853353-6853398:1:exon

CXXC5
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: CXXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7130770..7577541
location: region:7130770-7577541:1
so has part: feature:7130770-7577541:1:exon
subclass of: SO_0000010

115079609
type: Gene
SIO_000068: ncbigene

position:7130770:1
position: 7130770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7577541:1
position: 7577541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7130770-7577541:1:exon

CXXC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: CXXC5
product: CXXC finger protein 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029583296.1
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7130770..7130848,7131465..7131523,7351813..7351921,7433136..7434038,7553658..7553760,7576669..7577541)
location: region:7130770-7577541:1
so has part: feature:7130770-7130848:1:exon
so has part: feature:7131465-7131523:1:exon
so has part: feature:7351813-7351921:1:exon
so has part: feature:7433136-7434038:1:exon
so has part: feature:7553658-7553760:1:exon
so has part: feature:7576669-7577541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7130770-7130848:1:exon

position:7130848:1
position: 7130848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7131465-7131523:1:exon

position:7131465:1
position: 7131465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7131523:1
position: 7131523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7351813-7351921:1:exon

position:7351813:1
position: 7351813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7351921:1
position: 7351921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7433136-7434038:1:exon

position:7433136:1
position: 7433136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7434038:1
position: 7434038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7553658-7553760:1:exon

position:7553658:1
position: 7553658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7553760:1
position: 7553760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7576669-7577541:1:exon

position:7576669:1
position: 7576669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CXXC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: CXXC5
product: CXXC finger protein 5, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029583303.1
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7130922..7131215,7131465..7131523,7147748..7147789,7351813..7351921,7576669..7577541)
location: region:7130922-7577541:1
so has part: feature:7130922-7131215:1:exon
so has part: feature:7131465-7131523:1:exon
so has part: feature:7147748-7147789:1:exon
so has part: feature:7351813-7351921:1:exon
so has part: feature:7576669-7577541:1:exon

position:7130922:1
position: 7130922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7130922-7131215:1:exon

position:7131215:1
position: 7131215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7131465-7131523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7147748-7147789:1:exon

position:7147748:1
position: 7147748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7147789:1
position: 7147789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7351813-7351921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7576669-7577541:1:exon

CXXC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: CXXC5
product: CXXC finger protein 5, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029583305.1
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7130922..7131107,7131465..7131523,7147748..7147789,7351813..7351921,7576669..7577541)
location: region:7130922-7577541:1
so has part: feature:7130922-7131107:1:exon
so has part: feature:7131465-7131523:1:exon
so has part: feature:7147748-7147789:1:exon
so has part: feature:7351813-7351921:1:exon
so has part: feature:7576669-7577541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7130922-7131107:1:exon

position:7131107:1
position: 7131107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7131465-7131523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7147748-7147789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7351813-7351921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7576669-7577541:1:exon

CXXC5
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 194408
gene: CXXC5
product: CXXC finger protein 5, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003853340.1
SIO_010081: CXXC5
so part of: CXXC5
location: join(7130922..7131215,7131465..7131523,7147748..7147789,7351813..7351921,7369827..7370013,7433136..7433265)
location: region:7130922-7433265:1
so has part: feature:7130922-7131215:1:exon
so has part: feature:7131465-7131523:1:exon
so has part: feature:7147748-7147789:1:exon
so has part: feature:7351813-7351921:1:exon
so has part: feature:7369827-7370013:1:exon
so has part: feature:7433136-7433265:1:exon

position:7433265:1
position: 7433265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7130922-7131215:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7131465-7131523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7147748-7147789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7351813-7351921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7369827-7370013:1:exon

position:7369827:1
position: 7369827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7370013:1
position: 7370013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7433136-7433265:1:exon

CXXC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: CXXC5
product: CXXC finger protein 5, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029583300.1
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7130923..7131215,7131465..7131523,7433136..7434038,7553658..7553760,7576669..7577541)
location: region:7130923-7577541:1
so has part: feature:7130923-7131215:1:exon
so has part: feature:7131465-7131523:1:exon
so has part: feature:7433136-7434038:1:exon
so has part: feature:7553658-7553760:1:exon
so has part: feature:7576669-7577541:1:exon

position:7130923:1
position: 7130923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7130923-7131215:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7131465-7131523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7433136-7434038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7553658-7553760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7576669-7577541:1:exon

CXXC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: CXXC5
product: CXXC finger protein 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029583293.1
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7130923..7131107,7131465..7131523,7351813..7351921,7369827..7370013,7433136..7434038,7553658..7553760,7576669..7577541)
location: region:7130923-7577541:1
so has part: feature:7130923-7131107:1:exon
so has part: feature:7131465-7131523:1:exon
so has part: feature:7351813-7351921:1:exon
so has part: feature:7369827-7370013:1:exon
so has part: feature:7433136-7434038:1:exon
so has part: feature:7553658-7553760:1:exon
so has part: feature:7576669-7577541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7130923-7131107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7131465-7131523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7351813-7351921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7369827-7370013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7433136-7434038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7553658-7553760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7576669-7577541:1:exon

CXXC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: CXXC5
product: CXXC finger protein 5, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029583299.1
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7130923..7131107,7131465..7131523,7433136..7434038,7553658..7553760,7576669..7577541)
location: region:7130923-7577541:1
so has part: feature:7130923-7131107:1:exon
so has part: feature:7131465-7131523:1:exon
so has part: feature:7433136-7434038:1:exon
so has part: feature:7553658-7553760:1:exon
so has part: feature:7576669-7577541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7130923-7131107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7131465-7131523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7433136-7434038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7553658-7553760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7576669-7577541:1:exon

CXXC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: CXXC5
product: CXXC finger protein 5, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029583297.1
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7130924..7131215,7131465..7131523,7147748..7147789,7351813..7351921,7433136..7434038,7553658..7553760,7576669..7577541)
location: region:7130924-7577541:1
so has part: feature:7130924-7131215:1:exon
so has part: feature:7131465-7131523:1:exon
so has part: feature:7147748-7147789:1:exon
so has part: feature:7351813-7351921:1:exon
so has part: feature:7433136-7434038:1:exon
so has part: feature:7553658-7553760:1:exon
so has part: feature:7576669-7577541:1:exon

position:7130924:1
position: 7130924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7130924-7131215:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7131465-7131523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7147748-7147789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7351813-7351921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7433136-7434038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7553658-7553760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7576669-7577541:1:exon

CXXC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: CXXC5
product: CXXC finger protein 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_029583294.1
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7130924..7131215,7131465..7131523,7351813..7351921,7433136..7434038,7553658..7553760,7576669..7577541)
location: region:7130924-7577541:1
so has part: feature:7130924-7131215:1:exon
so has part: feature:7131465-7131523:1:exon
so has part: feature:7351813-7351921:1:exon
so has part: feature:7433136-7434038:1:exon
so has part: feature:7553658-7553760:1:exon
so has part: feature:7576669-7577541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7130924-7131215:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7131465-7131523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7351813-7351921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7433136-7434038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7553658-7553760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7576669-7577541:1:exon

CXXC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: CXXC5
product: CXXC finger protein 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029583295.1
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7130924..7131107,7131465..7131523,7147748..7147789,7351813..7351921,7433136..7434038,7553658..7553760,7576669..7577541)
location: region:7130924-7577541:1
so has part: feature:7130924-7131107:1:exon
so has part: feature:7131465-7131523:1:exon
so has part: feature:7147748-7147789:1:exon
so has part: feature:7351813-7351921:1:exon
so has part: feature:7433136-7434038:1:exon
so has part: feature:7553658-7553760:1:exon
so has part: feature:7576669-7577541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7130924-7131107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7131465-7131523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7147748-7147789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7351813-7351921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7433136-7434038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7553658-7553760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7576669-7577541:1:exon

CXXC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: CXXC5
product: CXXC finger protein 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_029583292.1
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7130924..7131107,7131465..7131523,7351813..7351921,7433136..7434038,7553658..7553760,7576669..7577541)
location: region:7130924-7577541:1
so has part: feature:7130924-7131107:1:exon
so has part: feature:7131465-7131523:1:exon
so has part: feature:7351813-7351921:1:exon
so has part: feature:7433136-7434038:1:exon
so has part: feature:7553658-7553760:1:exon
so has part: feature:7576669-7577541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7130924-7131107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7131465-7131523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7351813-7351921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7433136-7434038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7553658-7553760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7576669-7577541:1:exon

CXXC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: CXXC5
product: CXXC finger protein 5, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029583302.1
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7130924..7131107,7131465..7131523,7351813..7351921,7433136..7434038,7570095..7570165,7576669..7577541)
location: region:7130924-7577541:1
so has part: feature:7130924-7131107:1:exon
so has part: feature:7131465-7131523:1:exon
so has part: feature:7351813-7351921:1:exon
so has part: feature:7433136-7434038:1:exon
so has part: feature:7570095-7570165:1:exon
so has part: feature:7576669-7577541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7130924-7131107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7131465-7131523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7351813-7351921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7433136-7434038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7570095-7570165:1:exon

position:7570095:1
position: 7570095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7570165:1
position: 7570165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7576669-7577541:1:exon

CXXC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: CXXC5
product: CXXC finger protein 5, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_029583301.1
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7130926..7131107,7131465..7131523,7351813..7351921,7433136..7434038,7576669..7577541)
location: region:7130926-7577541:1
so has part: feature:7130926-7131107:1:exon
so has part: feature:7131465-7131523:1:exon
so has part: feature:7351813-7351921:1:exon
so has part: feature:7433136-7434038:1:exon
so has part: feature:7576669-7577541:1:exon

position:7130926:1
position: 7130926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7130926-7131107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7131465-7131523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7351813-7351921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7433136-7434038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7576669-7577541:1:exon

CXXC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: CXXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CXXC-type zinc finger protein 5 isoform X4
translation: MLPCVGRARWAAEVGWWGCGSQRLRVKARHSAAPARRIAGIGLRRFRAPISEGEFGAGGGPSLAAAAAAWRPPGTIPASTETSLDSCLVIIAVVPHEPVTLLHELNIADTLCRILKNHRKVMLPTGAAFRWFQ
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7131069..7131215,7131465..7131523,7147748..7147789,7351813..7351921,7576669..7576713)
location: region:7131069-7576713:1
so has part: feature:7131069-7131215:1:exon
so has part: feature:7131465-7131523:1:exon
so has part: feature:7147748-7147789:1:exon
so has part: feature:7351813-7351921:1:exon
so has part: feature:7576669-7576713:1:exon

XP_029439163.1
type: Protein
SIO_000068: ncbiprotein

position:7131069:1
position: 7131069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7576713:1
position: 7576713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7131069-7131215:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7131465-7131523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7147748-7147789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7351813-7351921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7576669-7576713:1:exon

CXXC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: CXXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CXXC-type zinc finger protein 5 isoform X5
translation: MLPCVGRARWAAEISEGEFGAGGGPSLAAAAAAWRPPGTIPASTETSLDSCLVIIAVVPHEPVTLLHELNIADTLCRILKNHRKVMLPTGAAFRWFQ
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7131069..7131107,7131465..7131523,7147748..7147789,7351813..7351921,7576669..7576713)
location: region:7131069-7576713:1
so has part: feature:7131069-7131107:1:exon
so has part: feature:7131465-7131523:1:exon
so has part: feature:7147748-7147789:1:exon
so has part: feature:7351813-7351921:1:exon
so has part: feature:7576669-7576713:1:exon

XP_029439165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7131069-7131107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7131465-7131523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7147748-7147789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7351813-7351921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7576669-7576713:1:exon

CXXC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: CXXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CXXC-type zinc finger protein 5 isoform X2
translation: MSEPSSQLDTSNKPDHLENSSADDLPPPIHSERRNKSGIISEPLNKSLKKSRPLSHYSTFGSSSSISEHLDRGISLANGGDLTLDKSISTSKHKHISHLLNKSSRVTEDSADGLNNLQFMQSPDMFKGLGSEHIPPPTDTGSGISDMEAVSAVETMNLASDFPYLGAFPINPGLFIMTPAGVFLTESALHMAGLAEYPMQNELASAINSGKKKRKRCGMCPPCRRRINCEQCSSCRNRKTGHQICKFRKCEELKKKPAALEKVMLPTGAAFRWFQ
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7433256..7434038,7576669..7576713)
location: region:7433256-7576713:1
so has part: feature:7433256-7434038:1:exon
so has part: feature:7576669-7576713:1:exon

XP_029439161.1
type: Protein
SIO_000068: ncbiprotein

position:7433256:1
position: 7433256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7433256-7434038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7576669-7576713:1:exon

CXXC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: CXXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CXXC-type zinc finger protein 5 isoform X3
translation: MSEPSSQLDTSNKPDHLENSSADDLPPPIHSERRNKSGIISEPLNKSLKKSRPLSHYSTFGSSSSISEHLDRGISLANGGDLTLDKSISTSKHKHISHLLNKSSRVTEDSADGLNNLQFMQSPDMFKGLGSEHIPPPTDTGSGISDMEAVSAVETMNLASDFPYLGAFPINPGLFIMTPAGVFLTESALHMAGLAEYPMQNELASAINSGKKKRKRCGMCPPCRRRINCEQCSSCRNRKTGHQICKFRKCEELKKKPAALEMMTFVMGS
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7433256..7434038,7570095..7570121)
location: region:7433256-7570121:1
so has part: feature:7433256-7434038:1:exon
so has part: feature:7570095-7570121:1:exon

XP_029439162.1
type: Protein
SIO_000068: ncbiprotein

position:7570121:1
position: 7570121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7433256-7434038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7570095-7570121:1:exon

CXXC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: CXXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CXXC-type zinc finger protein 5 isoform X1
translation: MSEPSSQLDTSNKPDHLENSSADDLPPPIHSERRNKSGIISEPLNKSLKKSRPLSHYSTFGSSSSISEHLDRGISLANGGDLTLDKSISTSKHKHISHLLNKSSRVTEDSADGLNNLQFMQSPDMFKGLGSEHIPPPTDTGSGISDMEAVSAVETMNLASDFPYLGAFPINPGLFIMTPAGVFLTESALHMAGLAEYPMQNELASAINSGKKKRKRCGMCPPCRRRINCEQCSSCRNRKTGHQICKFRKCEELKKKPAALEDPALVNENAMNCRYRAAPSRIRC
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7433256..7434038,7553658..7553729)
location: region:7433256-7553729:1
so has part: feature:7433256-7434038:1:exon
so has part: feature:7553658-7553729:1:exon

XP_029439152.1
type: Protein
SIO_000068: ncbiprotein

position:7553729:1
position: 7553729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7433256-7434038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7553658-7553729:1:exon

CXXC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: CXXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CXXC-type zinc finger protein 5 isoform X1
translation: MSEPSSQLDTSNKPDHLENSSADDLPPPIHSERRNKSGIISEPLNKSLKKSRPLSHYSTFGSSSSISEHLDRGISLANGGDLTLDKSISTSKHKHISHLLNKSSRVTEDSADGLNNLQFMQSPDMFKGLGSEHIPPPTDTGSGISDMEAVSAVETMNLASDFPYLGAFPINPGLFIMTPAGVFLTESALHMAGLAEYPMQNELASAINSGKKKRKRCGMCPPCRRRINCEQCSSCRNRKTGHQICKFRKCEELKKKPAALEDPALVNENAMNCRYRAAPSRIRC
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7433256..7434038,7553658..7553729)
location: region:7433256-7553729:1
so has part: feature:7433256-7434038:1:exon
so has part: feature:7553658-7553729:1:exon

XP_029439153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7433256-7434038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7553658-7553729:1:exon

CXXC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: CXXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CXXC-type zinc finger protein 5 isoform X1
translation: MSEPSSQLDTSNKPDHLENSSADDLPPPIHSERRNKSGIISEPLNKSLKKSRPLSHYSTFGSSSSISEHLDRGISLANGGDLTLDKSISTSKHKHISHLLNKSSRVTEDSADGLNNLQFMQSPDMFKGLGSEHIPPPTDTGSGISDMEAVSAVETMNLASDFPYLGAFPINPGLFIMTPAGVFLTESALHMAGLAEYPMQNELASAINSGKKKRKRCGMCPPCRRRINCEQCSSCRNRKTGHQICKFRKCEELKKKPAALEDPALVNENAMNCRYRAAPSRIRC
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7433256..7434038,7553658..7553729)
location: region:7433256-7553729:1
so has part: feature:7433256-7434038:1:exon
so has part: feature:7553658-7553729:1:exon

XP_029439154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7433256-7434038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7553658-7553729:1:exon

CXXC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: CXXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CXXC-type zinc finger protein 5 isoform X1
translation: MSEPSSQLDTSNKPDHLENSSADDLPPPIHSERRNKSGIISEPLNKSLKKSRPLSHYSTFGSSSSISEHLDRGISLANGGDLTLDKSISTSKHKHISHLLNKSSRVTEDSADGLNNLQFMQSPDMFKGLGSEHIPPPTDTGSGISDMEAVSAVETMNLASDFPYLGAFPINPGLFIMTPAGVFLTESALHMAGLAEYPMQNELASAINSGKKKRKRCGMCPPCRRRINCEQCSSCRNRKTGHQICKFRKCEELKKKPAALEDPALVNENAMNCRYRAAPSRIRC
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7433256..7434038,7553658..7553729)
location: region:7433256-7553729:1
so has part: feature:7433256-7434038:1:exon
so has part: feature:7553658-7553729:1:exon

XP_029439155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7433256-7434038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7553658-7553729:1:exon

CXXC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: CXXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CXXC-type zinc finger protein 5 isoform X1
translation: MSEPSSQLDTSNKPDHLENSSADDLPPPIHSERRNKSGIISEPLNKSLKKSRPLSHYSTFGSSSSISEHLDRGISLANGGDLTLDKSISTSKHKHISHLLNKSSRVTEDSADGLNNLQFMQSPDMFKGLGSEHIPPPTDTGSGISDMEAVSAVETMNLASDFPYLGAFPINPGLFIMTPAGVFLTESALHMAGLAEYPMQNELASAINSGKKKRKRCGMCPPCRRRINCEQCSSCRNRKTGHQICKFRKCEELKKKPAALEDPALVNENAMNCRYRAAPSRIRC
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7433256..7434038,7553658..7553729)
location: region:7433256-7553729:1
so has part: feature:7433256-7434038:1:exon
so has part: feature:7553658-7553729:1:exon

XP_029439156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7433256-7434038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7553658-7553729:1:exon

CXXC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: CXXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CXXC-type zinc finger protein 5 isoform X1
translation: MSEPSSQLDTSNKPDHLENSSADDLPPPIHSERRNKSGIISEPLNKSLKKSRPLSHYSTFGSSSSISEHLDRGISLANGGDLTLDKSISTSKHKHISHLLNKSSRVTEDSADGLNNLQFMQSPDMFKGLGSEHIPPPTDTGSGISDMEAVSAVETMNLASDFPYLGAFPINPGLFIMTPAGVFLTESALHMAGLAEYPMQNELASAINSGKKKRKRCGMCPPCRRRINCEQCSSCRNRKTGHQICKFRKCEELKKKPAALEDPALVNENAMNCRYRAAPSRIRC
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7433256..7434038,7553658..7553729)
location: region:7433256-7553729:1
so has part: feature:7433256-7434038:1:exon
so has part: feature:7553658-7553729:1:exon

XP_029439157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7433256-7434038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7553658-7553729:1:exon

CXXC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: CXXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CXXC-type zinc finger protein 5 isoform X1
translation: MSEPSSQLDTSNKPDHLENSSADDLPPPIHSERRNKSGIISEPLNKSLKKSRPLSHYSTFGSSSSISEHLDRGISLANGGDLTLDKSISTSKHKHISHLLNKSSRVTEDSADGLNNLQFMQSPDMFKGLGSEHIPPPTDTGSGISDMEAVSAVETMNLASDFPYLGAFPINPGLFIMTPAGVFLTESALHMAGLAEYPMQNELASAINSGKKKRKRCGMCPPCRRRINCEQCSSCRNRKTGHQICKFRKCEELKKKPAALEDPALVNENAMNCRYRAAPSRIRC
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7433256..7434038,7553658..7553729)
location: region:7433256-7553729:1
so has part: feature:7433256-7434038:1:exon
so has part: feature:7553658-7553729:1:exon

XP_029439159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7433256-7434038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7553658-7553729:1:exon

CXXC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: CXXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CXXC-type zinc finger protein 5 isoform X1
translation: MSEPSSQLDTSNKPDHLENSSADDLPPPIHSERRNKSGIISEPLNKSLKKSRPLSHYSTFGSSSSISEHLDRGISLANGGDLTLDKSISTSKHKHISHLLNKSSRVTEDSADGLNNLQFMQSPDMFKGLGSEHIPPPTDTGSGISDMEAVSAVETMNLASDFPYLGAFPINPGLFIMTPAGVFLTESALHMAGLAEYPMQNELASAINSGKKKRKRCGMCPPCRRRINCEQCSSCRNRKTGHQICKFRKCEELKKKPAALEDPALVNENAMNCRYRAAPSRIRC
SIO_010081: CXXC5
subclass of: SO_0000673
so part of: CXXC5
location: join(7433256..7434038,7553658..7553729)
location: region:7433256-7553729:1
so has part: feature:7433256-7434038:1:exon
so has part: feature:7553658-7553729:1:exon

XP_029439160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7433256-7434038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7553658-7553729:1:exon

PURA
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: PURA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7901358..7903713
location: region:7901358-7903713:1
so has part: feature:7901358-7903713:1:exon
subclass of: SO_0000010

115079945
type: Gene
SIO_000068: ncbigene

position:7901358:1
position: 7901358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7903713:1
position: 7903713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7901358-7903713:1:exon

PURA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: PURA
product: purine rich element binding protein A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029583914.1
SIO_010081: PURA
subclass of: SO_0000673
so part of: PURA
location: 7901358..7903713
location: region:7901358-7903713:1
so has part: feature:7901358-7903713:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7901358-7903713:1:exon

PURA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: PURA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional activator protein Pur-alpha
translation: MADRDSGSEQGGAGLGSGAGSLLPAAAGSGLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSNPDAAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRVRQTVNRGPGLGAAQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFLRVSEVKPTYRNSITVPHKVWAKFGHTFCKYAEDMRKIQDKQREKRQAEQHPPPGPPASSATAAAELLPGQGDADDDED
SIO_010081: PURA
subclass of: SO_0000673
so part of: PURA
location: 7901487..7902377
location: region:7901487-7902377:1
so has part: feature:7901487-7902377:1:exon

XP_029439774.1
type: Protein
SIO_000068: ncbiprotein

position:7901487:1
position: 7901487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7902377:1
position: 7902377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7901487-7902377:1:exon

LOC115079802
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115079802
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8102305..8188408
location: region:8102305-8188408:1
so has part: feature:8102305-8188408:1:exon
subclass of: SO_0000011

115079802
type: Gene
SIO_000068: ncbigene

position:8102305:1
position: 8102305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8188408:1
position: 8188408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8102305-8188408:1:exon

LOC115079802
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115079802
product: uncharacterized LOC115079802
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003853385.1
SIO_010081: LOC115079802
subclass of: SO_0000673
so part of: LOC115079802
location: join(8102305..8102420,8133161..8133254,8188270..8188408)
location: region:8102305-8188408:1
so has part: feature:8102305-8102420:1:exon
so has part: feature:8133161-8133254:1:exon
so has part: feature:8188270-8188408:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8102305-8102420:1:exon

position:8102420:1
position: 8102420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8133161-8133254:1:exon

position:8133161:1
position: 8133161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8133254:1
position: 8133254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8188270-8188408:1:exon

position:8188270:1
position: 8188270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LCP2
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8192091..8518261)
location: region:8192091-8518261:-1
so has part: feature:8192091-8518261:-1:exon
subclass of: SO_0000010

115079750
type: Gene
SIO_000068: ncbigene

position:8192091:-1
position: 8192091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8518261:-1
position: 8518261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8192091-8518261:-1:exon

LCP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: LCP2
product: lymphocyte cytosolic protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_029583581.1
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(8192091..8192429,8204159..8204314,8207270..8207347,8223044..8223147,8231501..8231541,8239711..8239828,8256190..8256199,8268714..8268741,8282029..8282115,8289154..8289173,8305366..8305391,8322121..8322207,8349169..8349235,8379343..8379437,8388916..8389114,8393459..8393493,8411055..8411086,8439660..8439725,8487050..8487096,8505685..8505747,8518038..8518261))
location: region:8192091-8518261:-1
so has part: feature:8518038-8518261:-1:exon
so has part: feature:8505685-8505747:-1:exon
so has part: feature:8487050-8487096:-1:exon
so has part: feature:8439660-8439725:-1:exon
so has part: feature:8411055-8411086:-1:exon
so has part: feature:8393459-8393493:-1:exon
so has part: feature:8388916-8389114:-1:exon
so has part: feature:8379343-8379437:-1:exon
so has part: feature:8349169-8349235:-1:exon
so has part: feature:8322121-8322207:-1:exon
so has part: feature:8305366-8305391:-1:exon
so has part: feature:8289154-8289173:-1:exon
so has part: feature:8282029-8282115:-1:exon
so has part: feature:8268714-8268741:-1:exon
so has part: feature:8256190-8256199:-1:exon
so has part: feature:8239711-8239828:-1:exon
so has part: feature:8231501-8231541:-1:exon
so has part: feature:8223044-8223147:-1:exon
so has part: feature:8207270-8207347:-1:exon
so has part: feature:8204159-8204314:-1:exon
so has part: feature:8192091-8192429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8518038-8518261:-1:exon

position:8518038:-1
position: 8518038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8505685-8505747:-1:exon

position:8505685:-1
position: 8505685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8505747:-1
position: 8505747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8487050-8487096:-1:exon

position:8487050:-1
position: 8487050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8487096:-1
position: 8487096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8439660-8439725:-1:exon

position:8439660:-1
position: 8439660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8439725:-1
position: 8439725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8411055-8411086:-1:exon

position:8411055:-1
position: 8411055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8411086:-1
position: 8411086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8393459-8393493:-1:exon

position:8393459:-1
position: 8393459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8393493:-1
position: 8393493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8388916-8389114:-1:exon

position:8388916:-1
position: 8388916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8389114:-1
position: 8389114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8379343-8379437:-1:exon

position:8379343:-1
position: 8379343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8379437:-1
position: 8379437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8349169-8349235:-1:exon

position:8349169:-1
position: 8349169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8349235:-1
position: 8349235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8322121-8322207:-1:exon

position:8322121:-1
position: 8322121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8322207:-1
position: 8322207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8305366-8305391:-1:exon

position:8305366:-1
position: 8305366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8305391:-1
position: 8305391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8289154-8289173:-1:exon

position:8289154:-1
position: 8289154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8289173:-1
position: 8289173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8282029-8282115:-1:exon

position:8282029:-1
position: 8282029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8282115:-1
position: 8282115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8268714-8268741:-1:exon

position:8268714:-1
position: 8268714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8268741:-1
position: 8268741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8256190-8256199:-1:exon

position:8256190:-1
position: 8256190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8256199:-1
position: 8256199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8239711-8239828:-1:exon

position:8239711:-1
position: 8239711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8239828:-1
position: 8239828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8231501-8231541:-1:exon

position:8231501:-1
position: 8231501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8231541:-1
position: 8231541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8223044-8223147:-1:exon

position:8223044:-1
position: 8223044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8223147:-1
position: 8223147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8207270-8207347:-1:exon

position:8207270:-1
position: 8207270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8207347:-1
position: 8207347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8204159-8204314:-1:exon

position:8204159:-1
position: 8204159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8204314:-1
position: 8204314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:8192091-8192429:-1:exon

position:8192429:-1
position: 8192429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LCP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: LCP2
product: lymphocyte cytosolic protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_029583580.1
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(8192091..8192429,8204159..8204314,8207270..8207347,8223044..8223147,8231501..8231541,8239711..8239831,8256190..8256199,8268714..8268741,8282029..8282115,8289154..8289173,8305366..8305391,8322121..8322207,8349169..8349235,8379343..8379437,8388916..8389114,8393459..8393493,8411055..8411086,8439660..8439725,8487050..8487096,8505685..8505747,8518038..8518260))
location: region:8192091-8518260:-1
so has part: feature:8518038-8518260:-1:exon
so has part: feature:8505685-8505747:-1:exon
so has part: feature:8487050-8487096:-1:exon
so has part: feature:8439660-8439725:-1:exon
so has part: feature:8411055-8411086:-1:exon
so has part: feature:8393459-8393493:-1:exon
so has part: feature:8388916-8389114:-1:exon
so has part: feature:8379343-8379437:-1:exon
so has part: feature:8349169-8349235:-1:exon
so has part: feature:8322121-8322207:-1:exon
so has part: feature:8305366-8305391:-1:exon
so has part: feature:8289154-8289173:-1:exon
so has part: feature:8282029-8282115:-1:exon
so has part: feature:8268714-8268741:-1:exon
so has part: feature:8256190-8256199:-1:exon
so has part: feature:8239711-8239831:-1:exon
so has part: feature:8231501-8231541:-1:exon
so has part: feature:8223044-8223147:-1:exon
so has part: feature:8207270-8207347:-1:exon
so has part: feature:8204159-8204314:-1:exon
so has part: feature:8192091-8192429:-1:exon

position:8518260:-1
position: 8518260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8518038-8518260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8505685-8505747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8487050-8487096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8439660-8439725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8411055-8411086:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8393459-8393493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8388916-8389114:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8379343-8379437:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8349169-8349235:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8322121-8322207:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8305366-8305391:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8289154-8289173:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8282029-8282115:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8268714-8268741:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8256190-8256199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8239711-8239831:-1:exon

position:8239831:-1
position: 8239831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8231501-8231541:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8223044-8223147:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8207270-8207347:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8204159-8204314:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8192091-8192429:-1:exon

LCP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: LCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte cytosolic protein 2 isoform X2
translation: MNKTTMDFRNVSNRSEVMTWGPDALADYFKMINFKDCEDVVRKYNISGPRFLSMAENNFQKFPKLRVPLLSKLCQEINKKEERRSLFSRKMPVHKIPEEKEFKQDDDGWSSFEEDDDYESPTEDQDFEEDEGDYESPTEVPVEDGSDNLDYEPPPTNNEEAHSNVIFSASIPSNSGYIDRLTTVSSSQHPPLPPQRHGPTLLPPVAGVRNTPFQPPLQNNEVISGRSMRHSKPPAPIVDRTKKPPFVHPGAQNAEKDYTMQGKKLPFSEMPIALPPRPPMDHSTRIQRPPPPTERINAVAERKPTRSIWQGNRITEEDGPQKPLPQPVSSHYSSNTFPSSRVNKIVLGAPASRANTESMHSSGSLPPRFHSSNISRSFSEGPANFRPPIPAPSIHMMSSTPVDKDECLPQQKWYTGEVNRPEAEEALMKINQDGTFLVRDSSKRSVSHPFVLMVLYKNKVYNIQIRYDEREDIYLLGTGLRGKENFSSVADMIEHFRRTPLLLIDGKDRGSKNQCMLTYAAAENV
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(8192304..8192429,8204159..8204314,8207270..8207347,8223044..8223147,8231501..8231541,8239711..8239828,8256190..8256199,8268714..8268741,8282029..8282115,8289154..8289173,8305366..8305391,8322121..8322207,8349169..8349235,8379343..8379437,8388916..8389114,8393459..8393493,8411055..8411086,8439660..8439725,8487050..8487096,8505685..8505747,8518038..8518130))
location: region:8192304-8518130:-1
so has part: feature:8518038-8518130:-1:exon
so has part: feature:8505685-8505747:-1:exon
so has part: feature:8487050-8487096:-1:exon
so has part: feature:8439660-8439725:-1:exon
so has part: feature:8411055-8411086:-1:exon
so has part: feature:8393459-8393493:-1:exon
so has part: feature:8388916-8389114:-1:exon
so has part: feature:8379343-8379437:-1:exon
so has part: feature:8349169-8349235:-1:exon
so has part: feature:8322121-8322207:-1:exon
so has part: feature:8305366-8305391:-1:exon
so has part: feature:8289154-8289173:-1:exon
so has part: feature:8282029-8282115:-1:exon
so has part: feature:8268714-8268741:-1:exon
so has part: feature:8256190-8256199:-1:exon
so has part: feature:8239711-8239828:-1:exon
so has part: feature:8231501-8231541:-1:exon
so has part: feature:8223044-8223147:-1:exon
so has part: feature:8207270-8207347:-1:exon
so has part: feature:8204159-8204314:-1:exon
so has part: feature:8192304-8192429:-1:exon

XP_029439441.1
type: Protein
SIO_000068: ncbiprotein

position:8192304:-1
position: 8192304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8518130:-1
position: 8518130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8518038-8518130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8505685-8505747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8487050-8487096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8439660-8439725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8411055-8411086:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8393459-8393493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8388916-8389114:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8379343-8379437:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8349169-8349235:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8322121-8322207:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8305366-8305391:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8289154-8289173:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8282029-8282115:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8268714-8268741:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8256190-8256199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8239711-8239828:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8231501-8231541:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8223044-8223147:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8207270-8207347:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8204159-8204314:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8192304-8192429:-1:exon

LCP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: LCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte cytosolic protein 2 isoform X1
translation: MNKTTMDFRNVSNRSEVMTWGPDALADYFKMINFKDCEDVVRKYNISGPRFLSMAENNFQKFPKLRVPLLSKLCQEINKKEERRSLFSRKMPVHKIPEEKEFKQDDDGWSSFEEDDDYESPTEDQDFEEDEGDYESPTEVPVEDGSDNLDYEPPPTNNEEAHSNVIFSASIPSNSGYIDRLTTVSSSQHPPLPPQRHGPTLLPPVAGVRNTPFQPPLQNNEVISGRSMRHSKPPAPIVDRTKKPPFVHPGAQNAEKDYTMQGKKLPFSEMPIALPPRPPMDHSTRIQRPPPPTERINAVAERKPTRSIWQGNRITEEDAGPQKPLPQPVSSHYSSNTFPSSRVNKIVLGAPASRANTESMHSSGSLPPRFHSSNISRSFSEGPANFRPPIPAPSIHMMSSTPVDKDECLPQQKWYTGEVNRPEAEEALMKINQDGTFLVRDSSKRSVSHPFVLMVLYKNKVYNIQIRYDEREDIYLLGTGLRGKENFSSVADMIEHFRRTPLLLIDGKDRGSKNQCMLTYAAAENV
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(8192304..8192429,8204159..8204314,8207270..8207347,8223044..8223147,8231501..8231541,8239711..8239831,8256190..8256199,8268714..8268741,8282029..8282115,8289154..8289173,8305366..8305391,8322121..8322207,8349169..8349235,8379343..8379437,8388916..8389114,8393459..8393493,8411055..8411086,8439660..8439725,8487050..8487096,8505685..8505747,8518038..8518130))
location: region:8192304-8518130:-1
so has part: feature:8518038-8518130:-1:exon
so has part: feature:8505685-8505747:-1:exon
so has part: feature:8487050-8487096:-1:exon
so has part: feature:8439660-8439725:-1:exon
so has part: feature:8411055-8411086:-1:exon
so has part: feature:8393459-8393493:-1:exon
so has part: feature:8388916-8389114:-1:exon
so has part: feature:8379343-8379437:-1:exon
so has part: feature:8349169-8349235:-1:exon
so has part: feature:8322121-8322207:-1:exon
so has part: feature:8305366-8305391:-1:exon
so has part: feature:8289154-8289173:-1:exon
so has part: feature:8282029-8282115:-1:exon
so has part: feature:8268714-8268741:-1:exon
so has part: feature:8256190-8256199:-1:exon
so has part: feature:8239711-8239831:-1:exon
so has part: feature:8231501-8231541:-1:exon
so has part: feature:8223044-8223147:-1:exon
so has part: feature:8207270-8207347:-1:exon
so has part: feature:8204159-8204314:-1:exon
so has part: feature:8192304-8192429:-1:exon

XP_029439440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8518038-8518130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8505685-8505747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8487050-8487096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8439660-8439725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8411055-8411086:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8393459-8393493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8388916-8389114:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8379343-8379437:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8349169-8349235:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8322121-8322207:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8305366-8305391:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8289154-8289173:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8282029-8282115:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8268714-8268741:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8256190-8256199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8239711-8239831:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8231501-8231541:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8223044-8223147:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8207270-8207347:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8204159-8204314:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8192304-8192429:-1:exon

KCNMB1
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: KCNMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8720754..8802442)
location: region:8720754-8802442:-1
so has part: feature:8720754-8802442:-1:exon
subclass of: SO_0000010

115079980
type: Gene
SIO_000068: ncbigene

position:8720754:-1
position: 8720754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8802442:-1
position: 8802442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8720754-8802442:-1:exon

KCNMB1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 194408
gene: KCNMB1
product: potassium calcium-activated channel subfamily M regulatory beta subunit 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003853474.1
SIO_010081: KCNMB1
so part of: KCNMB1
location: complement(join(8720754..8721956,8786529..8786724,8793207..8793374,8802275..8802442))
location: region:8720754-8802442:-1
so has part: feature:8802275-8802442:-1:exon
so has part: feature:8793207-8793374:-1:exon
so has part: feature:8786529-8786724:-1:exon
so has part: feature:8720754-8721956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8802275-8802442:-1:exon

position:8802275:-1
position: 8802275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8793207-8793374:-1:exon

position:8793207:-1
position: 8793207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8793374:-1
position: 8793374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8786529-8786724:-1:exon

position:8786529:-1
position: 8786529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8786724:-1
position: 8786724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8720754-8721956:-1:exon

position:8721956:-1
position: 8721956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNMB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: KCNMB1
product: potassium calcium-activated channel subfamily M regulatory beta subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_029583974.1
SIO_010081: KCNMB1
subclass of: SO_0000673
so part of: KCNMB1
location: complement(join(8753007..8753407,8786529..8786724,8793207..8793374,8802287..8802442))
location: region:8753007-8802442:-1
so has part: feature:8802287-8802442:-1:exon
so has part: feature:8793207-8793374:-1:exon
so has part: feature:8786529-8786724:-1:exon
so has part: feature:8753007-8753407:-1:exon

position:8753007:-1
position: 8753007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8802287-8802442:-1:exon

position:8802287:-1
position: 8802287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8793207-8793374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8786529-8786724:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8753007-8753407:-1:exon

position:8753407:-1
position: 8753407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNMB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: KCNMB1
product: potassium calcium-activated channel subfamily M regulatory beta subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_029583973.1
SIO_010081: KCNMB1
subclass of: SO_0000673
so part of: KCNMB1
location: complement(join(8753007..8753407,8786529..8786724,8793207..8793374,8802275..8802442))
location: region:8753007-8802442:-1
so has part: feature:8802275-8802442:-1:exon
so has part: feature:8793207-8793374:-1:exon
so has part: feature:8786529-8786724:-1:exon
so has part: feature:8753007-8753407:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8802275-8802442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8793207-8793374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8786529-8786724:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8753007-8753407:-1:exon

KCNMB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: KCNMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-activated potassium channel subunit beta-1
translation: MVLCSVIMYFLVGTTALPLHRKSIWTQEETCSLVQASVRGVMECVFNPAPNYCKTSNYPCLLVTVIVNHSSEKRMLYHMEDSLDINPKCSYVPQCKENTTETKIEVEEIAANFRRVQSFRCHYDPNGEQKTVILIRQYGPLWLIFYLLLPTFMMIGGVSIVILVKISQYFSLLAAQNTQINL
SIO_010081: KCNMB1
subclass of: SO_0000673
so part of: KCNMB1
location: complement(join(8753123..8753407,8786529..8786724,8793207..8793274))
location: region:8753123-8793274:-1
so has part: feature:8793207-8793274:-1:exon
so has part: feature:8786529-8786724:-1:exon
so has part: feature:8753123-8753407:-1:exon

XP_029439833.1
type: Protein
SIO_000068: ncbiprotein

position:8753123:-1
position: 8753123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8793274:-1
position: 8793274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8793207-8793274:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8786529-8786724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8753123-8753407:-1:exon

KCNMB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: KCNMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-activated potassium channel subunit beta-1
translation: MVLCSVIMYFLVGTTALPLHRKSIWTQEETCSLVQASVRGVMECVFNPAPNYCKTSNYPCLLVTVIVNHSSEKRMLYHMEDSLDINPKCSYVPQCKENTTETKIEVEEIAANFRRVQSFRCHYDPNGEQKTVILIRQYGPLWLIFYLLLPTFMMIGGVSIVILVKISQYFSLLAAQNTQINL
SIO_010081: KCNMB1
subclass of: SO_0000673
so part of: KCNMB1
location: complement(join(8753123..8753407,8786529..8786724,8793207..8793274))
location: region:8753123-8793274:-1
so has part: feature:8793207-8793274:-1:exon
so has part: feature:8786529-8786724:-1:exon
so has part: feature:8753123-8753407:-1:exon

XP_029439834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8793207-8793274:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8786529-8786724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8753123-8753407:-1:exon

KCNIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9634613..10151131
location: region:9634613-10151131:1
so has part: feature:9634613-10151131:1:exon
subclass of: SO_0000010

115079915
type: Gene
SIO_000068: ncbigene

position:9634613:1
position: 9634613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10151131:1
position: 10151131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9634613-10151131:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029583871.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(9634613..9634992,10083195..10083319,10104456..10104525,10119594..10119664,10120833..10120940,10124066..10124170,10147707..10147769,10150653..10151131)
location: region:9634613-10151131:1
so has part: feature:9634613-9634992:1:exon
so has part: feature:10083195-10083319:1:exon
so has part: feature:10104456-10104525:1:exon
so has part: feature:10119594-10119664:1:exon
so has part: feature:10120833-10120940:1:exon
so has part: feature:10124066-10124170:1:exon
so has part: feature:10147707-10147769:1:exon
so has part: feature:10150653-10151131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9634613-9634992:1:exon

position:9634992:1
position: 9634992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10083195-10083319:1:exon

position:10083195:1
position: 10083195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10083319:1
position: 10083319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10104456-10104525:1:exon

position:10104456:1
position: 10104456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10104525:1
position: 10104525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10119594-10119664:1:exon

position:10119594:1
position: 10119594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10119664:1
position: 10119664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10120833-10120940:1:exon

position:10120833:1
position: 10120833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10120940:1
position: 10120940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10124066-10124170:1:exon

position:10124066:1
position: 10124066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10124170:1
position: 10124170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10147707-10147769:1:exon

position:10147707:1
position: 10147707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10147769:1
position: 10147769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10150653-10151131:1:exon

position:10150653:1
position: 10150653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029583872.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(9669276..9669379,10083195..10083319,10104456..10104525,10119594..10119664,10120833..10120940,10124066..10124170,10147707..10147769,10150653..10151131)
location: region:9669276-10151131:1
so has part: feature:9669276-9669379:1:exon
so has part: feature:10083195-10083319:1:exon
so has part: feature:10104456-10104525:1:exon
so has part: feature:10119594-10119664:1:exon
so has part: feature:10120833-10120940:1:exon
so has part: feature:10124066-10124170:1:exon
so has part: feature:10147707-10147769:1:exon
so has part: feature:10150653-10151131:1:exon

position:9669276:1
position: 9669276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9669276-9669379:1:exon

position:9669379:1
position: 9669379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10083195-10083319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10104456-10104525:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10119594-10119664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10120833-10120940:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10124066-10124170:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10147707-10147769:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10150653-10151131:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029583870.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(9940230..9940296,10083195..10083319,10104456..10104525,10119594..10119664,10120833..10120940,10124066..10124170,10147707..10147769,10150653..10151131)
location: region:9940230-10151131:1
so has part: feature:9940230-9940296:1:exon
so has part: feature:10083195-10083319:1:exon
so has part: feature:10104456-10104525:1:exon
so has part: feature:10119594-10119664:1:exon
so has part: feature:10120833-10120940:1:exon
so has part: feature:10124066-10124170:1:exon
so has part: feature:10147707-10147769:1:exon
so has part: feature:10150653-10151131:1:exon

position:9940230:1
position: 9940230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9940230-9940296:1:exon

position:9940296:1
position: 9940296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10083195-10083319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10104456-10104525:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10119594-10119664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10120833-10120940:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10124066-10124170:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10147707-10147769:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10150653-10151131:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029583869.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(9994245..9994481,10083195..10083319,10104456..10104525,10119594..10119664,10120833..10120940,10124066..10124170,10147707..10147769,10150653..10151131)
location: region:9994245-10151131:1
so has part: feature:9994245-9994481:1:exon
so has part: feature:10083195-10083319:1:exon
so has part: feature:10104456-10104525:1:exon
so has part: feature:10119594-10119664:1:exon
so has part: feature:10120833-10120940:1:exon
so has part: feature:10124066-10124170:1:exon
so has part: feature:10147707-10147769:1:exon
so has part: feature:10150653-10151131:1:exon

position:9994245:1
position: 9994245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9994245-9994481:1:exon

position:9994481:1
position: 9994481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10083195-10083319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10104456-10104525:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10119594-10119664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10120833-10120940:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10124066-10124170:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10147707-10147769:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10150653-10151131:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X1
translation: MWKEGESEGLQTLGIVVVVCSSLKLLHYLGLIDLSDDKVEDELEMTTVCYRPEGLEPLEAQTNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYSQFFPHGDASMYAHYLFNAFDTAQSGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVDIFFQKMDKNKDGVVTLDEFMESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(9994373..9994481,10083195..10083319,10104456..10104525,10119594..10119664,10120833..10120940,10124066..10124170,10147707..10147769,10150653..10150700)
location: region:9994373-10150700:1
so has part: feature:9994373-9994481:1:exon
so has part: feature:10083195-10083319:1:exon
so has part: feature:10104456-10104525:1:exon
so has part: feature:10119594-10119664:1:exon
so has part: feature:10120833-10120940:1:exon
so has part: feature:10124066-10124170:1:exon
so has part: feature:10147707-10147769:1:exon
so has part: feature:10150653-10150700:1:exon

XP_029439729.1
type: Protein
SIO_000068: ncbiprotein

position:9994373:1
position: 9994373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10150700:1
position: 10150700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9994373-9994481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10083195-10083319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10104456-10104525:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10119594-10119664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10120833-10120940:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10124066-10124170:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10147707-10147769:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10150653-10150700:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X2
translation: MTTVCYRPEGLEPLEAQTNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYSQFFPHGDASMYAHYLFNAFDTAQSGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVDIFFQKMDKNKDGVVTLDEFMESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(10083218..10083319,10104456..10104525,10119594..10119664,10120833..10120940,10124066..10124170,10147707..10147769,10150653..10150700)
location: region:10083218-10150700:1
so has part: feature:10083218-10083319:1:exon
so has part: feature:10104456-10104525:1:exon
so has part: feature:10119594-10119664:1:exon
so has part: feature:10120833-10120940:1:exon
so has part: feature:10124066-10124170:1:exon
so has part: feature:10147707-10147769:1:exon
so has part: feature:10150653-10150700:1:exon

XP_029439730.1
type: Protein
SIO_000068: ncbiprotein

position:10083218:1
position: 10083218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10083218-10083319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10104456-10104525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10119594-10119664:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10120833-10120940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10124066-10124170:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10147707-10147769:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10150653-10150700:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X2
translation: MTTVCYRPEGLEPLEAQTNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYSQFFPHGDASMYAHYLFNAFDTAQSGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVDIFFQKMDKNKDGVVTLDEFMESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(10083218..10083319,10104456..10104525,10119594..10119664,10120833..10120940,10124066..10124170,10147707..10147769,10150653..10150700)
location: region:10083218-10150700:1
so has part: feature:10083218-10083319:1:exon
so has part: feature:10104456-10104525:1:exon
so has part: feature:10119594-10119664:1:exon
so has part: feature:10120833-10120940:1:exon
so has part: feature:10124066-10124170:1:exon
so has part: feature:10147707-10147769:1:exon
so has part: feature:10150653-10150700:1:exon

XP_029439731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10083218-10083319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10104456-10104525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10119594-10119664:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10120833-10120940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10124066-10124170:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10147707-10147769:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10150653-10150700:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X2
translation: MTTVCYRPEGLEPLEAQTNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYSQFFPHGDASMYAHYLFNAFDTAQSGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVDIFFQKMDKNKDGVVTLDEFMESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(10083218..10083319,10104456..10104525,10119594..10119664,10120833..10120940,10124066..10124170,10147707..10147769,10150653..10150700)
location: region:10083218-10150700:1
so has part: feature:10083218-10083319:1:exon
so has part: feature:10104456-10104525:1:exon
so has part: feature:10119594-10119664:1:exon
so has part: feature:10120833-10120940:1:exon
so has part: feature:10124066-10124170:1:exon
so has part: feature:10147707-10147769:1:exon
so has part: feature:10150653-10150700:1:exon

XP_029439732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10083218-10083319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10104456-10104525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10119594-10119664:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10120833-10120940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10124066-10124170:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10147707-10147769:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10150653-10150700:1:exon

GABRP
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: GABRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10284812..10407238
location: region:10284812-10407238:1
so has part: feature:10284812-10407238:1:exon
subclass of: SO_0000010

115079960
type: Gene
SIO_000068: ncbigene

position:10284812:1
position: 10284812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10407238:1
position: 10407238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10284812-10407238:1:exon

GABRP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: GABRP
product: gamma-aminobutyric acid type A receptor pi subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029583948.1
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(10284812..10284889,10321134..10321225,10324033..10324130,10343776..10343843,10351795..10352012,10358277..10358359,10359205..10359342,10376665..10376817,10388117..10388310,10404988..10407238)
location: region:10284812-10407238:1
so has part: feature:10284812-10284889:1:exon
so has part: feature:10321134-10321225:1:exon
so has part: feature:10324033-10324130:1:exon
so has part: feature:10343776-10343843:1:exon
so has part: feature:10351795-10352012:1:exon
so has part: feature:10358277-10358359:1:exon
so has part: feature:10359205-10359342:1:exon
so has part: feature:10376665-10376817:1:exon
so has part: feature:10388117-10388310:1:exon
so has part: feature:10404988-10407238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10284812-10284889:1:exon

position:10284889:1
position: 10284889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10321134-10321225:1:exon

position:10321134:1
position: 10321134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10321225:1
position: 10321225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10324033-10324130:1:exon

position:10324033:1
position: 10324033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10324130:1
position: 10324130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10343776-10343843:1:exon

position:10343776:1
position: 10343776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10343843:1
position: 10343843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10351795-10352012:1:exon

position:10351795:1
position: 10351795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10352012:1
position: 10352012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10358277-10358359:1:exon

position:10358277:1
position: 10358277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10358359:1
position: 10358359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10359205-10359342:1:exon

position:10359205:1
position: 10359205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10359342:1
position: 10359342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10376665-10376817:1:exon

position:10376665:1
position: 10376665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10376817:1
position: 10376817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10388117-10388310:1:exon

position:10388117:1
position: 10388117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10388310:1
position: 10388310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10404988-10407238:1:exon

position:10404988:1
position: 10404988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAR-UCU
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: TRNAR-UCU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 10289852..10289924
location: region:10289852-10289924:1
so has part: feature:10289852-10289924:1:exon
subclass of: SO_0000663

115080099
type: Gene
SIO_000068: ncbigene

position:10289852:1
position: 10289852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10289924:1
position: 10289924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10289852-10289924:1:exon

TRNAR-UCU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 194408
gene: TRNAR-UCU
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:10289885..10289887,aa:Arg,seq:tct)
SIO_010081: TRNAR-UCU
subclass of: SO_0000673
so part of: TRNAR-UCU
location: 10289852..10289924
location: region:10289852-10289924:1
so has part: feature:10289852-10289924:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10289852-10289924:1:exon

GABRP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: GABRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit pi
translation: MYHRNWNSVILWLFLCLSSVQDTKGSDTEVLPGFQNLTKGYNKYLRPRFDGKPVEVAMSLEIASIDAISEINMDYTAMIFLRQRWTDERLVFEGNKSLSLDARLAELLWVPDTYIVDSKKSFLHDVTAQNRLIRIFSNGTVLYAIRITTTVACNMDLSKYPMDKQMCKLQLESWGYSVNDLVFTWIRGNDSIRGLENLSLSQYTVERYYTLVSKGKYETGVYPRLILFFELRRNFLYFVLETYIPATLLVILSWVSFWISLSSVPARTCIGVTTVLAMTTLMMGSRTSLPTSNCFIKALDVFLGICFTFIFGALLEYAAVHYCQEQHSSTKKDSKSPPEELKEVKITSIIGSSLPSLKRRKSLNQAEHTTEDSSKSSSATSDLRTSENTFMYMLKIKWKMSKFMDYFTVENPYNIDRYSRILFPLSFMIVNLFYWAYYLYM
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(10321173..10321225,10324033..10324130,10343776..10343843,10351795..10352012,10358277..10358359,10359205..10359342,10376665..10376817,10388117..10388310,10404988..10405308)
location: region:10321173-10405308:1
so has part: feature:10321173-10321225:1:exon
so has part: feature:10324033-10324130:1:exon
so has part: feature:10343776-10343843:1:exon
so has part: feature:10351795-10352012:1:exon
so has part: feature:10358277-10358359:1:exon
so has part: feature:10359205-10359342:1:exon
so has part: feature:10376665-10376817:1:exon
so has part: feature:10388117-10388310:1:exon
so has part: feature:10404988-10405308:1:exon

XP_029439808.1
type: Protein
SIO_000068: ncbiprotein

position:10321173:1
position: 10321173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10405308:1
position: 10405308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10321173-10321225:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10324033-10324130:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10343776-10343843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10351795-10352012:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10358277-10358359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10359205-10359342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10376665-10376817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10388117-10388310:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10404988-10405308:1:exon

LOC115080045
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115080045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10496876..10596016
location: region:10496876-10596016:1
so has part: feature:10496876-10596016:1:exon
subclass of: SO_0000010

115080045
type: Gene
SIO_000068: ncbigene

position:10496876:1
position: 10496876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10596016:1
position: 10596016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10496876-10596016:1:exon

LOC115080045
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: LOC115080045
product: kazal-type serine protease inhibitor domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029584076.1
SIO_010081: LOC115080045
subclass of: SO_0000673
so part of: LOC115080045
location: join(10496876..10497416,10549898..10550058,10550888..10550989,10577006..10577153,10594446..10596016)
location: region:10496876-10596016:1
so has part: feature:10496876-10497416:1:exon
so has part: feature:10549898-10550058:1:exon
so has part: feature:10550888-10550989:1:exon
so has part: feature:10577006-10577153:1:exon
so has part: feature:10594446-10596016:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10496876-10497416:1:exon

position:10497416:1
position: 10497416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10549898-10550058:1:exon

position:10549898:1
position: 10549898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10550058:1
position: 10550058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10550888-10550989:1:exon

position:10550888:1
position: 10550888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10550989:1
position: 10550989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10577006-10577153:1:exon

position:10577006:1
position: 10577006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10577153:1
position: 10577153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10594446-10596016:1:exon

position:10594446:1
position: 10594446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115080045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: LOC115080045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kazal-type serine protease inhibitor domain-containing protein 1-like
translation: MKSLALVMLLTVVMPGFQCFPIFSHQGWLRLLREGDSCGPCRTDLCPSLSHCPAGTVLDECGCCAECGNVEGQICDLDASTHFYGKCGDELECQVQVGDIPEPQCVCRSQHSICASDGHTYGNICRLQETQARRRADLKLSHMGPCNAAPVISLPPKDTQNYTGNDIIFGCEVSAYPMPHLEWKKKGNSLFLPGDDAHISVQFGCEVSAYPMPHLEWKKKGNSLFLPGDDAHISVQARGGPQKHGVTGWLQIQGIKKSDEGIYICQTKNKYGMTSASATLKVIDHGSSSLFKGITGSRITSYNMDYKDYSDPTDDEDEAEEYESENSED
SIO_010081: LOC115080045
subclass of: SO_0000673
so part of: LOC115080045
location: join(10496972..10497416,10549898..10550058,10550888..10550989,10577006..10577153,10594446..10594579)
location: region:10496972-10594579:1
so has part: feature:10496972-10497416:1:exon
so has part: feature:10549898-10550058:1:exon
so has part: feature:10550888-10550989:1:exon
so has part: feature:10577006-10577153:1:exon
so has part: feature:10594446-10594579:1:exon

XP_029439936.1
type: Protein
SIO_000068: ncbiprotein

position:10496972:1
position: 10496972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10594579:1
position: 10594579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10496972-10497416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10549898-10550058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10550888-10550989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10577006-10577153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10594446-10594579:1:exon

LOC115079888
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115079888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10622425..10721836
location: region:10622425-10721836:1
so has part: feature:10622425-10721836:1:exon
subclass of: SO_0000011

115079888
type: Gene
SIO_000068: ncbigene

position:10622425:1
position: 10622425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10721836:1
position: 10721836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10622425-10721836:1:exon

LOC115079888
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115079888
product: uncharacterized LOC115079888, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003853432.1
SIO_010081: LOC115079888
subclass of: SO_0000673
so part of: LOC115079888
location: join(10622425..10622762,10685108..10685395,10692954..10693010,10693370..10693500,10719052..10721836)
location: region:10622425-10721836:1
so has part: feature:10622425-10622762:1:exon
so has part: feature:10685108-10685395:1:exon
so has part: feature:10692954-10693010:1:exon
so has part: feature:10693370-10693500:1:exon
so has part: feature:10719052-10721836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10622425-10622762:1:exon

position:10622762:1
position: 10622762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10685108-10685395:1:exon

position:10685108:1
position: 10685108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10685395:1
position: 10685395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10692954-10693010:1:exon

position:10692954:1
position: 10692954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10693010:1
position: 10693010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10693370-10693500:1:exon

position:10693370:1
position: 10693370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10693500:1
position: 10693500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10719052-10721836:1:exon

position:10719052:1
position: 10719052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115079888
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115079888
product: uncharacterized LOC115079888, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003853433.1
SIO_010081: LOC115079888
subclass of: SO_0000673
so part of: LOC115079888
location: join(10622425..10622762,10692954..10693010,10693370..10693500,10719052..10721836)
location: region:10622425-10721836:1
so has part: feature:10622425-10622762:1:exon
so has part: feature:10692954-10693010:1:exon
so has part: feature:10693370-10693500:1:exon
so has part: feature:10719052-10721836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10622425-10622762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10692954-10693010:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10693370-10693500:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10719052-10721836:1:exon

RANBP17
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: RANBP17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10765079..11798129
location: region:10765079-11798129:1
so has part: feature:10765079-11798129:1:exon
subclass of: SO_0000010

115079766
type: Gene
SIO_000068: ncbigene

position:10765079:1
position: 10765079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11798129:1
position: 11798129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10765079-11798129:1:exon

RANBP17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: RANBP17
product: RAN binding protein 17, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_029583607.1
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(10765079..10765413,10778593..10778739,10785714..10785804,10804191..10804357,10832733..10832798,10872347..10872451,10881420..10881585,10927567..10927640,10932474..10932593,10933249..10933395,10934080..10934252,10959773..10959966,11009811..11009916,11019336..11019471,11318126..11318199,11352098..11352178,11416891..11416954,11417040..11417148,11463096..11463199,11523169..11523257,11546809..11546916,11561614..11561696,11595097..11595311,11620674..11620812,11653085..11653251,11777967..11778065,11796326..11796453,11797729..11798129)
location: region:10765079-11798129:1
so has part: feature:10765079-10765413:1:exon
so has part: feature:10778593-10778739:1:exon
so has part: feature:10785714-10785804:1:exon
so has part: feature:10804191-10804357:1:exon
so has part: feature:10832733-10832798:1:exon
so has part: feature:10872347-10872451:1:exon
so has part: feature:10881420-10881585:1:exon
so has part: feature:10927567-10927640:1:exon
so has part: feature:10932474-10932593:1:exon
so has part: feature:10933249-10933395:1:exon
so has part: feature:10934080-10934252:1:exon
so has part: feature:10959773-10959966:1:exon
so has part: feature:11009811-11009916:1:exon
so has part: feature:11019336-11019471:1:exon
so has part: feature:11318126-11318199:1:exon
so has part: feature:11352098-11352178:1:exon
so has part: feature:11416891-11416954:1:exon
so has part: feature:11417040-11417148:1:exon
so has part: feature:11463096-11463199:1:exon
so has part: feature:11523169-11523257:1:exon
so has part: feature:11546809-11546916:1:exon
so has part: feature:11561614-11561696:1:exon
so has part: feature:11595097-11595311:1:exon
so has part: feature:11620674-11620812:1:exon
so has part: feature:11653085-11653251:1:exon
so has part: feature:11777967-11778065:1:exon
so has part: feature:11796326-11796453:1:exon
so has part: feature:11797729-11798129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10765079-10765413:1:exon

position:10765413:1
position: 10765413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10778593-10778739:1:exon

position:10778593:1
position: 10778593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10778739:1
position: 10778739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10785714-10785804:1:exon

position:10785714:1
position: 10785714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10785804:1
position: 10785804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10804191-10804357:1:exon

position:10804191:1
position: 10804191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10804357:1
position: 10804357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10832733-10832798:1:exon

position:10832733:1
position: 10832733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10832798:1
position: 10832798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10872347-10872451:1:exon

position:10872347:1
position: 10872347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10872451:1
position: 10872451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10881420-10881585:1:exon

position:10881420:1
position: 10881420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10881585:1
position: 10881585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10927567-10927640:1:exon

position:10927567:1
position: 10927567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10927640:1
position: 10927640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10932474-10932593:1:exon

position:10932474:1
position: 10932474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10932593:1
position: 10932593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10933249-10933395:1:exon

position:10933249:1
position: 10933249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10933395:1
position: 10933395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10934080-10934252:1:exon

position:10934080:1
position: 10934080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10934252:1
position: 10934252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10959773-10959966:1:exon

position:10959773:1
position: 10959773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10959966:1
position: 10959966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11009811-11009916:1:exon

position:11009811:1
position: 11009811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11009916:1
position: 11009916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:11019336-11019471:1:exon

position:11019336:1
position: 11019336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11019471:1
position: 11019471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:11318126-11318199:1:exon

position:11318126:1
position: 11318126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11318199:1
position: 11318199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:11352098-11352178:1:exon

position:11352098:1
position: 11352098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11352178:1
position: 11352178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:11416891-11416954:1:exon

position:11416891:1
position: 11416891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11416954:1
position: 11416954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:11417040-11417148:1:exon

position:11417040:1
position: 11417040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11417148:1
position: 11417148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:11463096-11463199:1:exon

position:11463096:1
position: 11463096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11463199:1
position: 11463199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:11523169-11523257:1:exon

position:11523169:1
position: 11523169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11523257:1
position: 11523257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:11546809-11546916:1:exon

position:11546809:1
position: 11546809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11546916:1
position: 11546916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:11561614-11561696:1:exon

position:11561614:1
position: 11561614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11561696:1
position: 11561696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:11595097-11595311:1:exon

position:11595097:1
position: 11595097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11595311:1
position: 11595311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:11620674-11620812:1:exon

position:11620674:1
position: 11620674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11620812:1
position: 11620812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:11653085-11653251:1:exon

position:11653085:1
position: 11653085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11653251:1
position: 11653251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:11777967-11778065:1:exon

position:11777967:1
position: 11777967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11778065:1
position: 11778065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:11796326-11796453:1:exon

position:11796326:1
position: 11796326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11796453:1
position: 11796453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:11797729-11798129:1:exon

position:11797729:1
position: 11797729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RANBP17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: RANBP17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 17 isoform X2
translation: MAATAAEQLQSLSELEVLCTQLYEGTDLGQRVQAEKVLLELIESPECLSKCQLLLEQGTTSYAQLLAATCLSKLVSRVNPLPIEQRIDIRNYILNYTASQPKLAPFVIQALVQVIARITKLGWFEIQKDQLVFQDVIADVKKFLQGTVDHCVIGVMILSELTQEMNLVDYSRPSSKHRKTATSFRDSSLKDVLVLACSLLKEVLAKPLNLQDQSQQSLVMHLLKLVINCLNFDFIGSSADESADDLCTVQIPTTWRTIFLEPETLDLFFDLYHTLPPLLSQLALSCLVQFASVRRSLFSNPERAKYLGNLIKGVKRILENPQGLSDPSNYHEFCRFLARLKTNYQLGELVVVEEYPEVIRLIANFTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEVTKAYITSRLESVPVIVRDGLDDPLDDTATVFQQLEQLCTVSRCEYEKTCALLVQLFDQSAQNYQKLLHLPNRNPLELTVQEGRLAWLIYLVGTVIGGRLTYTSTDEHDAMDGELSCRVFQLIALTDARLPQSGNEKVELANLWFLDQFRKTYVGDQLQRTSKVYTRMSEVLGITDDNHVLETFMAKVVTNLKYWGRCETVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLQNHTSKHFPFLGVNDNFNLSDLRCRTTFYTALTRLLMVELGEDEDEFENFMLPITTSFETVAQIFNNNFKQEEAKRMLIGLARDLRGIAFALNTKTSYTMLFDWIYTSYLPILQRAVELWYREPACTTPIMKLMAELLQNRSQRLNFDVSSPNGILLFREASKMICTYGNQILSLGTIPKDQIYVLKLKGISICYSALKSALCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHMSFITSLEPHVLMYILTSISEGLTALDTIVSSSCCACLDYILTYLFKHIAKEGKKALRRRELSQDGQRLLHFMQQNPNVLQQMMSILMNTIIFEDCRNQWSVSRPLLGLILLNEKYFSELRVSLVNSQPVGKREVLDMCFRNLMEGVEQNLLVKNRDRFTQNMSVFRRDMAEVMRSDGSAEAGTLDMMS
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(10765384..10765413,10778593..10778739,10785714..10785804,10804191..10804357,10832733..10832798,10872347..10872451,10881420..10881585,10927567..10927640,10932474..10932593,10933249..10933395,10934080..10934252,10959773..10959966,11009811..11009916,11019336..11019471,11318126..11318199,11352098..11352178,11416891..11416954,11417040..11417148,11463096..11463199,11523169..11523257,11546809..11546916,11561614..11561696,11595097..11595311,11620674..11620812,11653085..11653251,11777967..11778065,11796326..11796453,11797729..11797825)
location: region:10765384-11797825:1
so has part: feature:10765384-10765413:1:exon
so has part: feature:10778593-10778739:1:exon
so has part: feature:10785714-10785804:1:exon
so has part: feature:10804191-10804357:1:exon
so has part: feature:10832733-10832798:1:exon
so has part: feature:10872347-10872451:1:exon
so has part: feature:10881420-10881585:1:exon
so has part: feature:10927567-10927640:1:exon
so has part: feature:10932474-10932593:1:exon
so has part: feature:10933249-10933395:1:exon
so has part: feature:10934080-10934252:1:exon
so has part: feature:10959773-10959966:1:exon
so has part: feature:11009811-11009916:1:exon
so has part: feature:11019336-11019471:1:exon
so has part: feature:11318126-11318199:1:exon
so has part: feature:11352098-11352178:1:exon
so has part: feature:11416891-11416954:1:exon
so has part: feature:11417040-11417148:1:exon
so has part: feature:11463096-11463199:1:exon
so has part: feature:11523169-11523257:1:exon
so has part: feature:11546809-11546916:1:exon
so has part: feature:11561614-11561696:1:exon
so has part: feature:11595097-11595311:1:exon
so has part: feature:11620674-11620812:1:exon
so has part: feature:11653085-11653251:1:exon
so has part: feature:11777967-11778065:1:exon
so has part: feature:11796326-11796453:1:exon
so has part: feature:11797729-11797825:1:exon

XP_029439467.1
type: Protein
SIO_000068: ncbiprotein

position:10765384:1
position: 10765384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11797825:1
position: 11797825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10765384-10765413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10778593-10778739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10785714-10785804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10804191-10804357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10832733-10832798:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10872347-10872451:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10881420-10881585:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10927567-10927640:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10932474-10932593:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10933249-10933395:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10934080-10934252:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10959773-10959966:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11009811-11009916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11019336-11019471:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11318126-11318199:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11352098-11352178:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11416891-11416954:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11417040-11417148:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11463096-11463199:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11523169-11523257:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11546809-11546916:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11561614-11561696:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11595097-11595311:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11620674-11620812:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11653085-11653251:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11777967-11778065:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11796326-11796453:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:11797729-11797825:1:exon

RANBP17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: RANBP17
product: RAN binding protein 17, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029583608.1
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(10765921..10766213,10778593..10778739,10785714..10785804,10804191..10804357,10832733..10832798,10872347..10872451,10881420..10881585,10927567..10927640,10932474..10932593,10933249..10933395,10934080..10934252,10959773..10959966,11009811..11009916,11019336..11019471,11318126..11318199,11352098..11352234,11463096..11463199,11523169..11523257,11546809..11546916,11561614..11561696,11595097..11595311,11620674..11620812,11653085..11653251,11777967..11778065,11796326..11796453,11797729..11798129)
location: region:10765921-11798129:1
so has part: feature:10765921-10766213:1:exon
so has part: feature:10778593-10778739:1:exon
so has part: feature:10785714-10785804:1:exon
so has part: feature:10804191-10804357:1:exon
so has part: feature:10832733-10832798:1:exon
so has part: feature:10872347-10872451:1:exon
so has part: feature:10881420-10881585:1:exon
so has part: feature:10927567-10927640:1:exon
so has part: feature:10932474-10932593:1:exon
so has part: feature:10933249-10933395:1:exon
so has part: feature:10934080-10934252:1:exon
so has part: feature:10959773-10959966:1:exon
so has part: feature:11009811-11009916:1:exon
so has part: feature:11019336-11019471:1:exon
so has part: feature:11318126-11318199:1:exon
so has part: feature:11352098-11352234:1:exon
so has part: feature:11463096-11463199:1:exon
so has part: feature:11523169-11523257:1:exon
so has part: feature:11546809-11546916:1:exon
so has part: feature:11561614-11561696:1:exon
so has part: feature:11595097-11595311:1:exon
so has part: feature:11620674-11620812:1:exon
so has part: feature:11653085-11653251:1:exon
so has part: feature:11777967-11778065:1:exon
so has part: feature:11796326-11796453:1:exon
so has part: feature:11797729-11798129:1:exon

position:10765921:1
position: 10765921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10765921-10766213:1:exon

position:10766213:1
position: 10766213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10778593-10778739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10785714-10785804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10804191-10804357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10832733-10832798:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10872347-10872451:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10881420-10881585:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10927567-10927640:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10932474-10932593:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10933249-10933395:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10934080-10934252:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10959773-10959966:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11009811-11009916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11019336-11019471:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11318126-11318199:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11352098-11352234:1:exon

position:11352234:1
position: 11352234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:11463096-11463199:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11523169-11523257:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11546809-11546916:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11561614-11561696:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11595097-11595311:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11620674-11620812:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11653085-11653251:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11777967-11778065:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11796326-11796453:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11797729-11798129:1:exon

RANBP17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: RANBP17
product: RAN binding protein 17, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029583606.1
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(10765921..10766213,10778593..10778739,10785714..10785804,10804191..10804357,10832733..10832798,10872347..10872451,10881420..10881585,10927567..10927640,10932474..10932593,10933249..10933395,10934080..10934252,10959773..10959966,11009811..11009916,11019336..11019471,11318126..11318199,11352098..11352178,11416891..11416954,11417040..11417148,11463096..11463199,11523169..11523257,11546809..11546916,11561614..11561696,11595097..11595311,11620674..11620812,11653085..11653251,11777967..11778065,11796326..11796453,11797729..11798129)
location: region:10765921-11798129:1
so has part: feature:10765921-10766213:1:exon
so has part: feature:10778593-10778739:1:exon
so has part: feature:10785714-10785804:1:exon
so has part: feature:10804191-10804357:1:exon
so has part: feature:10832733-10832798:1:exon
so has part: feature:10872347-10872451:1:exon
so has part: feature:10881420-10881585:1:exon
so has part: feature:10927567-10927640:1:exon
so has part: feature:10932474-10932593:1:exon
so has part: feature:10933249-10933395:1:exon
so has part: feature:10934080-10934252:1:exon
so has part: feature:10959773-10959966:1:exon
so has part: feature:11009811-11009916:1:exon
so has part: feature:11019336-11019471:1:exon
so has part: feature:11318126-11318199:1:exon
so has part: feature:11352098-11352178:1:exon
so has part: feature:11416891-11416954:1:exon
so has part: feature:11417040-11417148:1:exon
so has part: feature:11463096-11463199:1:exon
so has part: feature:11523169-11523257:1:exon
so has part: feature:11546809-11546916:1:exon
so has part: feature:11561614-11561696:1:exon
so has part: feature:11595097-11595311:1:exon
so has part: feature:11620674-11620812:1:exon
so has part: feature:11653085-11653251:1:exon
so has part: feature:11777967-11778065:1:exon
so has part: feature:11796326-11796453:1:exon
so has part: feature:11797729-11798129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10765921-10766213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10778593-10778739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10785714-10785804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10804191-10804357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10832733-10832798:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10872347-10872451:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10881420-10881585:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10927567-10927640:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10932474-10932593:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10933249-10933395:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10934080-10934252:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10959773-10959966:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11009811-11009916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11019336-11019471:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11318126-11318199:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11352098-11352178:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11416891-11416954:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11417040-11417148:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11463096-11463199:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11523169-11523257:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11546809-11546916:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11561614-11561696:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11595097-11595311:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11620674-11620812:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11653085-11653251:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11777967-11778065:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11796326-11796453:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:11797729-11798129:1:exon

RANBP17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: RANBP17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 17 isoform X3
translation: MHIDCKTCFWQKSNAHFCSEREGGGITDKCPIPSLEERVFIRSLSELEVLCTQLYEGTDLGQRVQAEKVLLELIESPECLSKCQLLLEQGTTSYAQLLAATCLSKLVSRVNPLPIEQRIDIRNYILNYTASQPKLAPFVIQALVQVIARITKLGWFEIQKDQLVFQDVIADVKKFLQGTVDHCVIGVMILSELTQEMNLVDYSRPSSKHRKTATSFRDSSLKDVLVLACSLLKEVLAKPLNLQDQSQQSLVMHLLKLVINCLNFDFIGSSADESADDLCTVQIPTTWRTIFLEPETLDLFFDLYHTLPPLLSQLALSCLVQFASVRRSLFSNPERAKYLGNLIKGVKRILENPQGLSDPSNYHEFCRFLARLKTNYQLGELVVVEEYPEVIRLIANFTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEVTKAYITSRLESVPVIVRDGLDDPLDDTATVFQQLEQLCTVSRCEYEKTCALLVQLFDQSAQNYQKLLHLPNRNPLELTVQEGRLAWLIYLVGTVIGGRLTYTSTDEHDAMDGELSCRVFQLIALTDARLPQSGNEKVELANLWFLDQFRKTYVGDQLQRTSKVYTRMSEVLGITDDNHVLETFMAKVVTNLKYWGRCETVISRTLQFLNDLSVGYPLCSLRVCTRLEEESHAGEDEDEFENFMLPITTSFETVAQIFNNNFKQEEAKRMLIGLARDLRGIAFALNTKTSYTMLFDWIYTSYLPILQRAVELWYREPACTTPIMKLMAELLQNRSQRLNFDVSSPNGILLFREASKMICTYGNQILSLGTIPKDQIYVLKLKGISICYSALKSALCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHMSFITSLEPHVLMYILTSISEGLTALDTIVSSSCCACLDYILTYLFKHIAKEGKKALRRRELSQDGQRLLHFMQQNPNVLQQMMSILMNTIIFEDCRNQWSVSRPLLGLILLNEKYFSELRVSLVNSQPVGKREVLDMCFRNLMEGVEQNLLVKNRDRFTQNMSVFRRDMAEVMRSDGSAEAGTLDMMS
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(10766088..10766213,10778593..10778739,10785714..10785804,10804191..10804357,10832733..10832798,10872347..10872451,10881420..10881585,10927567..10927640,10932474..10932593,10933249..10933395,10934080..10934252,10959773..10959966,11009811..11009916,11019336..11019471,11318126..11318199,11352098..11352234,11463096..11463199,11523169..11523257,11546809..11546916,11561614..11561696,11595097..11595311,11620674..11620812,11653085..11653251,11777967..11778065,11796326..11796453,11797729..11797825)
location: region:10766088-11797825:1
so has part: feature:10766088-10766213:1:exon
so has part: feature:10778593-10778739:1:exon
so has part: feature:10785714-10785804:1:exon
so has part: feature:10804191-10804357:1:exon
so has part: feature:10832733-10832798:1:exon
so has part: feature:10872347-10872451:1:exon
so has part: feature:10881420-10881585:1:exon
so has part: feature:10927567-10927640:1:exon
so has part: feature:10932474-10932593:1:exon
so has part: feature:10933249-10933395:1:exon
so has part: feature:10934080-10934252:1:exon
so has part: feature:10959773-10959966:1:exon
so has part: feature:11009811-11009916:1:exon
so has part: feature:11019336-11019471:1:exon
so has part: feature:11318126-11318199:1:exon
so has part: feature:11352098-11352234:1:exon
so has part: feature:11463096-11463199:1:exon
so has part: feature:11523169-11523257:1:exon
so has part: feature:11546809-11546916:1:exon
so has part: feature:11561614-11561696:1:exon
so has part: feature:11595097-11595311:1:exon
so has part: feature:11620674-11620812:1:exon
so has part: feature:11653085-11653251:1:exon
so has part: feature:11777967-11778065:1:exon
so has part: feature:11796326-11796453:1:exon
so has part: feature:11797729-11797825:1:exon

XP_029439468.1
type: Protein
SIO_000068: ncbiprotein

position:10766088:1
position: 10766088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10766088-10766213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10778593-10778739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10785714-10785804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10804191-10804357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10832733-10832798:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10872347-10872451:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10881420-10881585:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10927567-10927640:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10932474-10932593:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10933249-10933395:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10934080-10934252:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10959773-10959966:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11009811-11009916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11019336-11019471:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11318126-11318199:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11352098-11352234:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11463096-11463199:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11523169-11523257:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11546809-11546916:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11561614-11561696:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11595097-11595311:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11620674-11620812:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11653085-11653251:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11777967-11778065:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11796326-11796453:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11797729-11797825:1:exon

RANBP17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: RANBP17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 17 isoform X1
translation: MHIDCKTCFWQKSNAHFCSEREGGGITDKCPIPSLEERVFIRSLSELEVLCTQLYEGTDLGQRVQAEKVLLELIESPECLSKCQLLLEQGTTSYAQLLAATCLSKLVSRVNPLPIEQRIDIRNYILNYTASQPKLAPFVIQALVQVIARITKLGWFEIQKDQLVFQDVIADVKKFLQGTVDHCVIGVMILSELTQEMNLVDYSRPSSKHRKTATSFRDSSLKDVLVLACSLLKEVLAKPLNLQDQSQQSLVMHLLKLVINCLNFDFIGSSADESADDLCTVQIPTTWRTIFLEPETLDLFFDLYHTLPPLLSQLALSCLVQFASVRRSLFSNPERAKYLGNLIKGVKRILENPQGLSDPSNYHEFCRFLARLKTNYQLGELVVVEEYPEVIRLIANFTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEVTKAYITSRLESVPVIVRDGLDDPLDDTATVFQQLEQLCTVSRCEYEKTCALLVQLFDQSAQNYQKLLHLPNRNPLELTVQEGRLAWLIYLVGTVIGGRLTYTSTDEHDAMDGELSCRVFQLIALTDARLPQSGNEKVELANLWFLDQFRKTYVGDQLQRTSKVYTRMSEVLGITDDNHVLETFMAKVVTNLKYWGRCETVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLQNHTSKHFPFLGVNDNFNLSDLRCRTTFYTALTRLLMVELGEDEDEFENFMLPITTSFETVAQIFNNNFKQEEAKRMLIGLARDLRGIAFALNTKTSYTMLFDWIYTSYLPILQRAVELWYREPACTTPIMKLMAELLQNRSQRLNFDVSSPNGILLFREASKMICTYGNQILSLGTIPKDQIYVLKLKGISICYSALKSALCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHMSFITSLEPHVLMYILTSISEGLTALDTIVSSSCCACLDYILTYLFKHIAKEGKKALRRRELSQDGQRLLHFMQQNPNVLQQMMSILMNTIIFEDCRNQWSVSRPLLGLILLNEKYFSELRVSLVNSQPVGKREVLDMCFRNLMEGVEQNLLVKNRDRFTQNMSVFRRDMAEVMRSDGSAEAGTLDMMS
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(10766088..10766213,10778593..10778739,10785714..10785804,10804191..10804357,10832733..10832798,10872347..10872451,10881420..10881585,10927567..10927640,10932474..10932593,10933249..10933395,10934080..10934252,10959773..10959966,11009811..11009916,11019336..11019471,11318126..11318199,11352098..11352178,11416891..11416954,11417040..11417148,11463096..11463199,11523169..11523257,11546809..11546916,11561614..11561696,11595097..11595311,11620674..11620812,11653085..11653251,11777967..11778065,11796326..11796453,11797729..11797825)
location: region:10766088-11797825:1
so has part: feature:10766088-10766213:1:exon
so has part: feature:10778593-10778739:1:exon
so has part: feature:10785714-10785804:1:exon
so has part: feature:10804191-10804357:1:exon
so has part: feature:10832733-10832798:1:exon
so has part: feature:10872347-10872451:1:exon
so has part: feature:10881420-10881585:1:exon
so has part: feature:10927567-10927640:1:exon
so has part: feature:10932474-10932593:1:exon
so has part: feature:10933249-10933395:1:exon
so has part: feature:10934080-10934252:1:exon
so has part: feature:10959773-10959966:1:exon
so has part: feature:11009811-11009916:1:exon
so has part: feature:11019336-11019471:1:exon
so has part: feature:11318126-11318199:1:exon
so has part: feature:11352098-11352178:1:exon
so has part: feature:11416891-11416954:1:exon
so has part: feature:11417040-11417148:1:exon
so has part: feature:11463096-11463199:1:exon
so has part: feature:11523169-11523257:1:exon
so has part: feature:11546809-11546916:1:exon
so has part: feature:11561614-11561696:1:exon
so has part: feature:11595097-11595311:1:exon
so has part: feature:11620674-11620812:1:exon
so has part: feature:11653085-11653251:1:exon
so has part: feature:11777967-11778065:1:exon
so has part: feature:11796326-11796453:1:exon
so has part: feature:11797729-11797825:1:exon

XP_029439466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10766088-10766213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10778593-10778739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10785714-10785804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10804191-10804357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10832733-10832798:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10872347-10872451:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10881420-10881585:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10927567-10927640:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10932474-10932593:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10933249-10933395:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10934080-10934252:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10959773-10959966:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11009811-11009916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11019336-11019471:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11318126-11318199:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11352098-11352178:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11416891-11416954:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11417040-11417148:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11463096-11463199:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11523169-11523257:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11546809-11546916:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11561614-11561696:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11595097-11595311:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11620674-11620812:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11653085-11653251:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11777967-11778065:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11796326-11796453:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:11797729-11797825:1:exon

TLX3
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: TLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11923853..11930886
location: region:11923853-11930886:1
so has part: feature:11923853-11930886:1:exon
subclass of: SO_0000010

115079867
type: Gene
SIO_000068: ncbigene

position:11923853:1
position: 11923853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11930886:1
position: 11930886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11923853-11930886:1:exon

TLX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: TLX3
product: T cell leukemia homeobox 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029583809.1
SIO_010081: TLX3
subclass of: SO_0000673
so part of: TLX3
location: join(11923853..11924267,11925735..11925978,11929588..11930886)
location: region:11923853-11930886:1
so has part: feature:11923853-11924267:1:exon
so has part: feature:11925735-11925978:1:exon
so has part: feature:11929588-11930886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11923853-11924267:1:exon

position:11924267:1
position: 11924267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11925735-11925978:1:exon

position:11925735:1
position: 11925735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11925978:1
position: 11925978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11929588-11930886:1:exon

position:11929588:1
position: 11929588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: TLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell leukemia homeobox protein 3
translation: MDPPTNAQTQHPHEPISFGIDQILNSSDPESSSQSQAGPRGSESSSSSYLGRGGAPYPSLPASFPGIGAPFEDAGSYSVNLSLAPAGVIRVPAHRPLPGAVPPPIASAIPAMPAVPGLGSLNFPWMESSRRFVKERFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQASRLMLQLQHDAFQKSLNDSIQPDPLCLHNSSLYALQNLQPWEEEGAKLPAVTSLV
SIO_010081: TLX3
subclass of: SO_0000673
so part of: TLX3
location: join(11923853..11924267,11925735..11925978,11929588..11929798)
location: region:11923853-11929798:1
so has part: feature:11923853-11924267:1:exon
so has part: feature:11925735-11925978:1:exon
so has part: feature:11929588-11929798:1:exon

XP_029439669.1
type: Protein
SIO_000068: ncbiprotein

position:11929798:1
position: 11929798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11923853-11924267:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11925735-11925978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11929588-11929798:1:exon

LOC115079905
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115079905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11987975..11993950)
location: region:11987975-11993950:-1
so has part: feature:11987975-11993950:-1:exon
subclass of: SO_0000010

115079905
type: Gene
SIO_000068: ncbigene

position:11987975:-1
position: 11987975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11993950:-1
position: 11993950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11987975-11993950:-1:exon

LOC115079905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: LOC115079905
product: uncharacterized LOC115079905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029583856.1
SIO_010081: LOC115079905
subclass of: SO_0000673
so part of: LOC115079905
location: complement(join(11987975..11990704,11993821..11993950))
location: region:11987975-11993950:-1
so has part: feature:11993821-11993950:-1:exon
so has part: feature:11987975-11990704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11993821-11993950:-1:exon

position:11993821:-1
position: 11993821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11987975-11990704:-1:exon

position:11990704:-1
position: 11990704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115079905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: LOC115079905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115079905
translation: MATFSNPHFQNRHSHLINIPLLKNNKNFLCLTFLLINAQSLSKKHMLISDLLQENNPDFFAITESWLKNTDQVILNHLNHNDYDTFSIPRNYKRGGGLLLIIRKHFSMKIIPHNLPKQFEVTLFDSQHLQICLVYCPPKLLDNNISPLIEFLISNINTKKPVIILGDFNLHTDANPRSSSCETLLDMLSSLNFILQVNNPTHKAGHTLDLIFTNNFMNSSISHNPVPWSDHHLLLCKSQTNFNNPTNNNSSKKSFKFRPPYQINLLLQELGLQLANLDLSNINNAIQSWSSITETTANNINPEKIKHLKNKKEIQNPWFNTTLKNMKSALRKTEKEWQKNKLPATLQKYRSQLAAYKKSIQNTKRNYFGNKIINSSNKPKSLFNFVNNLISDIHISNASITKKKPKPRFSHLL
SIO_010081: LOC115079905
subclass of: SO_0000673
so part of: LOC115079905
location: complement(11989155..11990396)
location: region:11989155-11990396:-1
so has part: feature:11989155-11990396:-1:exon

XP_029439716.1
type: Protein
SIO_000068: ncbiprotein

position:11989155:-1
position: 11989155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11990396:-1
position: 11990396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11989155-11990396:-1:exon

NPM1
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12066415..12150184
location: region:12066415-12150184:1
so has part: feature:12066415-12150184:1:exon
subclass of: SO_0000010

115079777
type: Gene
SIO_000068: ncbigene

position:12066415:1
position: 12066415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12150184:1
position: 12150184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12066415-12150184:1:exon

NPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: NPM1
product: nucleophosmin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_029583629.1
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(12066415..12066565,12069611..12069693,12076778..12076897,12084710..12084803,12091658..12091767,12101610..12101677,12107914..12107980,12118941..12119021,12125713..12125817,12133642..12133716,12149839..12150184)
location: region:12066415-12150184:1
so has part: feature:12066415-12066565:1:exon
so has part: feature:12069611-12069693:1:exon
so has part: feature:12076778-12076897:1:exon
so has part: feature:12084710-12084803:1:exon
so has part: feature:12091658-12091767:1:exon
so has part: feature:12101610-12101677:1:exon
so has part: feature:12107914-12107980:1:exon
so has part: feature:12118941-12119021:1:exon
so has part: feature:12125713-12125817:1:exon
so has part: feature:12133642-12133716:1:exon
so has part: feature:12149839-12150184:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12066415-12066565:1:exon

position:12066565:1
position: 12066565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12069611-12069693:1:exon

position:12069611:1
position: 12069611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12069693:1
position: 12069693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12076778-12076897:1:exon

position:12076778:1
position: 12076778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12076897:1
position: 12076897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12084710-12084803:1:exon

position:12084710:1
position: 12084710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12084803:1
position: 12084803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12091658-12091767:1:exon

position:12091658:1
position: 12091658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12091767:1
position: 12091767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12101610-12101677:1:exon

position:12101610:1
position: 12101610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12101677:1
position: 12101677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12107914-12107980:1:exon

position:12107914:1
position: 12107914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12107980:1
position: 12107980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12118941-12119021:1:exon

position:12118941:1
position: 12118941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12119021:1
position: 12119021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12125713-12125817:1:exon

position:12125713:1
position: 12125713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12125817:1
position: 12125817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12133642-12133716:1:exon

position:12133642:1
position: 12133642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12133716:1
position: 12133716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:12149839-12150184:1:exon

position:12149839:1
position: 12149839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleophosmin
translation: MEDSMDVESMAPLRPQNFLFGCELKADKKEYRFTMEDDENEHQLSLRTVSLGVGAKDDLHVVEAEGLNYEGKVIKVTLASLKASVQPTVSLGGFEITPPVVLRLKSGSGPVFISGQHLVALEEDLESSEDEEEKEDVKTSKTVVKRAAPGLAAKSPKKAKLEEDDEEDEEDDDFDEEDEDDFDDDEEDDEDEEDEDTPVKKDSKAKAPQKASQNGKASKQSTPAPKQTTPGQKKQEKLQTPKTPKQPLSIEDIKAKIQSSVEKGGTLPKLEPKFVNYVKNCFRTTDQKVIQDLWKWRQALKDGK
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(12066505..12066565,12069611..12069693,12076778..12076897,12084710..12084803,12091658..12091767,12101610..12101677,12107914..12107980,12118941..12119021,12125713..12125817,12133642..12133716,12149839..12149889)
location: region:12066505-12149889:1
so has part: feature:12066505-12066565:1:exon
so has part: feature:12069611-12069693:1:exon
so has part: feature:12076778-12076897:1:exon
so has part: feature:12084710-12084803:1:exon
so has part: feature:12091658-12091767:1:exon
so has part: feature:12101610-12101677:1:exon
so has part: feature:12107914-12107980:1:exon
so has part: feature:12118941-12119021:1:exon
so has part: feature:12125713-12125817:1:exon
so has part: feature:12133642-12133716:1:exon
so has part: feature:12149839-12149889:1:exon

XP_029439489.1
type: Protein
SIO_000068: ncbiprotein

position:12066505:1
position: 12066505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12149889:1
position: 12149889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12066505-12066565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12069611-12069693:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12076778-12076897:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12084710-12084803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12091658-12091767:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12101610-12101677:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12107914-12107980:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12118941-12119021:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12125713-12125817:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12133642-12133716:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12149839-12149889:1:exon

FGF18
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12170600..12416829
location: region:12170600-12416829:1
so has part: feature:12170600-12416829:1:exon
subclass of: SO_0000010

115079973
type: Gene
SIO_000068: ncbigene

position:12170600:1
position: 12170600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12416829:1
position: 12416829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12170600-12416829:1:exon

FGF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: FGF18
product: fibroblast growth factor 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029583966.1
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(12170600..12171376,12171567..12171603,12279455..12279635,12377561..12377667,12415876..12416827)
location: region:12170600-12416827:1
so has part: feature:12170600-12171376:1:exon
so has part: feature:12171567-12171603:1:exon
so has part: feature:12279455-12279635:1:exon
so has part: feature:12377561-12377667:1:exon
so has part: feature:12415876-12416827:1:exon

position:12416827:1
position: 12416827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12170600-12171376:1:exon

position:12171376:1
position: 12171376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12171567-12171603:1:exon

position:12171567:1
position: 12171567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12171603:1
position: 12171603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12279455-12279635:1:exon

position:12279455:1
position: 12279455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12279635:1
position: 12279635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12377561-12377667:1:exon

position:12377561:1
position: 12377561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12377667:1
position: 12377667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12415876-12416827:1:exon

position:12415876:1
position: 12415876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 18 isoform X2
translation: MYSLFSACTCICLHFLLMCFQLQIFVAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSRTSGKHIQVLGRRISAKGEDGDKYAQLLVETDTFGSQVRIKGKETDFYLCMNRKGKLVGKPDGTSKECVFIEKVLENNYTALMSAKYSGWYIGFTKRGRPRKGPKTRENQQDVHFMKRSPKGIVELQKPFKYTTVTKRTKRIRPTHPS
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(12171345..12171376,12171567..12171603,12279455..12279635,12377561..12377667,12415876..12416142)
location: region:12171345-12416142:1
so has part: feature:12171345-12171376:1:exon
so has part: feature:12171567-12171603:1:exon
so has part: feature:12279455-12279635:1:exon
so has part: feature:12377561-12377667:1:exon
so has part: feature:12415876-12416142:1:exon

XP_029439826.1
type: Protein
SIO_000068: ncbiprotein

position:12171345:1
position: 12171345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12416142:1
position: 12416142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12171345-12171376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12171567-12171603:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12279455-12279635:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12377561-12377667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12415876-12416142:1:exon

FGF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: FGF18
product: fibroblast growth factor 18, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029583967.1
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(12205753..12205871,12279455..12279586,12377566..12377667,12415876..12416829)
location: region:12205753-12416829:1
so has part: feature:12205753-12205871:1:exon
so has part: feature:12279455-12279586:1:exon
so has part: feature:12377566-12377667:1:exon
so has part: feature:12415876-12416829:1:exon

position:12205753:1
position: 12205753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12205753-12205871:1:exon

position:12205871:1
position: 12205871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12279455-12279586:1:exon

position:12279586:1
position: 12279586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12377566-12377667:1:exon

position:12377566:1
position: 12377566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12415876-12416829:1:exon

FGF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: FGF18
product: fibroblast growth factor 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029583965.1
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(12205753..12205871,12279455..12279635,12377561..12377667,12415876..12416828)
location: region:12205753-12416828:1
so has part: feature:12205753-12205871:1:exon
so has part: feature:12279455-12279635:1:exon
so has part: feature:12377561-12377667:1:exon
so has part: feature:12415876-12416828:1:exon

position:12416828:1
position: 12416828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12205753-12205871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12279455-12279635:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12377561-12377667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12415876-12416828:1:exon

FGF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 18 isoform X1
translation: MAPERKRVWCVPDLESRADFMQQSIQVLQLEQALPLEIFVAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSRTSGKHIQVLGRRISAKGEDGDKYAQLLVETDTFGSQVRIKGKETDFYLCMNRKGKLVGKPDGTSKECVFIEKVLENNYTALMSAKYSGWYIGFTKRGRPRKGPKTRENQQDVHFMKRSPKGIVELQKPFKYTTVTKRTKRIRPTHPS
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(12205761..12205871,12279455..12279635,12377561..12377667,12415876..12416142)
location: region:12205761-12416142:1
so has part: feature:12205761-12205871:1:exon
so has part: feature:12279455-12279635:1:exon
so has part: feature:12377561-12377667:1:exon
so has part: feature:12415876-12416142:1:exon

XP_029439825.1
type: Protein
SIO_000068: ncbiprotein

position:12205761:1
position: 12205761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12205761-12205871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12279455-12279635:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12377561-12377667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12415876-12416142:1:exon

FGF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 18 isoform X3
translation: MAPERKRVWCVPDLESRADFMQQSIQVLQLEQALPLEIFVAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSRTSGKHIQLLVETDTFGSQVRIKGKETDFYLCMNRKGKLVGKPDGTSKECVFIEKVLENNYTALMSAKYSGWYIGFTKRGRPRKGPKTRENQQDVHFMKRSPKGIVELQKPFKYTTVTKRTKRIRPTHPS
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(12205761..12205871,12279455..12279586,12377566..12377667,12415876..12416142)
location: region:12205761-12416142:1
so has part: feature:12205761-12205871:1:exon
so has part: feature:12279455-12279586:1:exon
so has part: feature:12377566-12377667:1:exon
so has part: feature:12415876-12416142:1:exon

XP_029439827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12205761-12205871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12279455-12279586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12377566-12377667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12415876-12416142:1:exon

LOC115079932
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115079932
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13173693..13180493)
location: region:13173693-13180493:-1
so has part: feature:13173693-13180493:-1:exon
subclass of: SO_0000011

115079932
type: Gene
SIO_000068: ncbigene

position:13173693:-1
position: 13173693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13180493:-1
position: 13180493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13173693-13180493:-1:exon

LOC115079932
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115079932
product: uncharacterized LOC115079932
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003853452.1
SIO_010081: LOC115079932
subclass of: SO_0000673
so part of: LOC115079932
location: complement(join(13173693..13174272,13178425..13178594,13178885..13180493))
location: region:13173693-13180493:-1
so has part: feature:13178885-13180493:-1:exon
so has part: feature:13178425-13178594:-1:exon
so has part: feature:13173693-13174272:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13178885-13180493:-1:exon

position:13178885:-1
position: 13178885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13178425-13178594:-1:exon

position:13178425:-1
position: 13178425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13178594:-1
position: 13178594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13173693-13174272:-1:exon

position:13174272:-1
position: 13174272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115080086
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115080086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13309884..13413878
location: region:13309884-13413878:1
so has part: feature:13309884-13413878:1:exon
subclass of: SO_0000011

115080086
type: Gene
SIO_000068: ncbigene

position:13309884:1
position: 13309884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13413878:1
position: 13413878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13309884-13413878:1:exon

LOC115080086
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115080086
product: uncharacterized LOC115080086, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003853509.1
SIO_010081: LOC115080086
subclass of: SO_0000673
so part of: LOC115080086
location: join(13309884..13310073,13392701..13392823,13398766..13398837,13399114..13399251,13411141..13411265,13412975..13413878)
location: region:13309884-13413878:1
so has part: feature:13309884-13310073:1:exon
so has part: feature:13392701-13392823:1:exon
so has part: feature:13398766-13398837:1:exon
so has part: feature:13399114-13399251:1:exon
so has part: feature:13411141-13411265:1:exon
so has part: feature:13412975-13413878:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13309884-13310073:1:exon

position:13310073:1
position: 13310073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13392701-13392823:1:exon

position:13392701:1
position: 13392701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13392823:1
position: 13392823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13398766-13398837:1:exon

position:13398766:1
position: 13398766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13398837:1
position: 13398837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13399114-13399251:1:exon

position:13399114:1
position: 13399114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13399251:1
position: 13399251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13411141-13411265:1:exon

position:13411141:1
position: 13411141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13411265:1
position: 13411265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13412975-13413878:1:exon

position:13412975:1
position: 13412975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115080086
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115080086
product: uncharacterized LOC115080086, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003853510.1
SIO_010081: LOC115080086
subclass of: SO_0000673
so part of: LOC115080086
location: join(13309884..13310073,13398766..13398837,13399114..13399251,13406814..13407120,13411141..13411265,13412975..13413878)
location: region:13309884-13413878:1
so has part: feature:13309884-13310073:1:exon
so has part: feature:13398766-13398837:1:exon
so has part: feature:13399114-13399251:1:exon
so has part: feature:13406814-13407120:1:exon
so has part: feature:13411141-13411265:1:exon
so has part: feature:13412975-13413878:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13309884-13310073:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13398766-13398837:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13399114-13399251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13406814-13407120:1:exon

position:13406814:1
position: 13406814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13407120:1
position: 13407120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13411141-13411265:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13412975-13413878:1:exon

LOC115080086
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115080086
product: uncharacterized LOC115080086, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003853507.1
SIO_010081: LOC115080086
subclass of: SO_0000673
so part of: LOC115080086
location: join(13309884..13310073,13398766..13398837,13399114..13399251,13411141..13411265,13412975..13413878)
location: region:13309884-13413878:1
so has part: feature:13309884-13310073:1:exon
so has part: feature:13398766-13398837:1:exon
so has part: feature:13399114-13399251:1:exon
so has part: feature:13411141-13411265:1:exon
so has part: feature:13412975-13413878:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13309884-13310073:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13398766-13398837:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13399114-13399251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13411141-13411265:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13412975-13413878:1:exon

LOC115080087
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115080087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13322866..13323811
location: region:13322866-13323811:1
so has part: feature:13322866-13323811:1:exon
subclass of: SO_0000011

115080087
type: Gene
SIO_000068: ncbigene

position:13322866:1
position: 13322866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13323811:1
position: 13323811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13322866-13323811:1:exon

LOC115080087
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115080087
product: uncharacterized LOC115080087
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003853511.1
SIO_010081: LOC115080087
subclass of: SO_0000673
so part of: LOC115080087
location: join(13322866..13323009,13323116..13323230,13323485..13323811)
location: region:13322866-13323811:1
so has part: feature:13322866-13323009:1:exon
so has part: feature:13323116-13323230:1:exon
so has part: feature:13323485-13323811:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13322866-13323009:1:exon

position:13323009:1
position: 13323009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13323116-13323230:1:exon

position:13323116:1
position: 13323116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13323230:1
position: 13323230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13323485-13323811:1:exon

position:13323485:1
position: 13323485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115079850
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115079850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13495051..13513257
location: region:13495051-13513257:1
so has part: feature:13495051-13513257:1:exon
subclass of: SO_0000011

115079850
type: Gene
SIO_000068: ncbigene

position:13495051:1
position: 13495051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13513257:1
position: 13513257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13495051-13513257:1:exon

LOC115079850
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115079850
product: uncharacterized LOC115079850
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003853404.1
SIO_010081: LOC115079850
subclass of: SO_0000673
so part of: LOC115079850
location: join(13495051..13495086,13511491..13511666,13511770..13513257)
location: region:13495051-13513257:1
so has part: feature:13495051-13495086:1:exon
so has part: feature:13511491-13511666:1:exon
so has part: feature:13511770-13513257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13495051-13495086:1:exon

position:13495086:1
position: 13495086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13511491-13511666:1:exon

position:13511491:1
position: 13511491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13511666:1
position: 13511666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13511770-13513257:1:exon

position:13511770:1
position: 13511770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXW11
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13585131..13876197)
location: region:13585131-13876197:-1
so has part: feature:13585131-13876197:-1:exon
subclass of: SO_0000010

115079758
type: Gene
SIO_000068: ncbigene

position:13585131:-1
position: 13585131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13876197:-1
position: 13876197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13585131-13876197:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029583589.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(13585131..13588137,13630127..13630315,13648167..13648245,13659814..13659924,13672988..13673106,13674765..13675014,13677503..13677621,13686075..13686212,13704564..13704654,13704747..13704933,13743932..13744157,13808862..13808924,13852682..13852783,13875885..13876197))
location: region:13585131-13876197:-1
so has part: feature:13875885-13876197:-1:exon
so has part: feature:13852682-13852783:-1:exon
so has part: feature:13808862-13808924:-1:exon
so has part: feature:13743932-13744157:-1:exon
so has part: feature:13704747-13704933:-1:exon
so has part: feature:13704564-13704654:-1:exon
so has part: feature:13686075-13686212:-1:exon
so has part: feature:13677503-13677621:-1:exon
so has part: feature:13674765-13675014:-1:exon
so has part: feature:13672988-13673106:-1:exon
so has part: feature:13659814-13659924:-1:exon
so has part: feature:13648167-13648245:-1:exon
so has part: feature:13630127-13630315:-1:exon
so has part: feature:13585131-13588137:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13875885-13876197:-1:exon

position:13875885:-1
position: 13875885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13852682-13852783:-1:exon

position:13852682:-1
position: 13852682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13852783:-1
position: 13852783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13808862-13808924:-1:exon

position:13808862:-1
position: 13808862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13808924:-1
position: 13808924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13743932-13744157:-1:exon

position:13743932:-1
position: 13743932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13744157:-1
position: 13744157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13704747-13704933:-1:exon

position:13704747:-1
position: 13704747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13704933:-1
position: 13704933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13704564-13704654:-1:exon

position:13704564:-1
position: 13704564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13704654:-1
position: 13704654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13686075-13686212:-1:exon

position:13686075:-1
position: 13686075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13686212:-1
position: 13686212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13677503-13677621:-1:exon

position:13677503:-1
position: 13677503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13677621:-1
position: 13677621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13674765-13675014:-1:exon

position:13674765:-1
position: 13674765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13675014:-1
position: 13675014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13672988-13673106:-1:exon

position:13672988:-1
position: 13672988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13673106:-1
position: 13673106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13659814-13659924:-1:exon

position:13659814:-1
position: 13659814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13659924:-1
position: 13659924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13648167-13648245:-1:exon

position:13648167:-1
position: 13648167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13648245:-1
position: 13648245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13630127-13630315:-1:exon

position:13630127:-1
position: 13630127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13630315:-1
position: 13630315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13585131-13588137:-1:exon

position:13588137:-1
position: 13588137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_029583590.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(13585131..13588137,13630127..13630315,13648167..13648245,13659814..13659924,13672988..13673106,13674765..13675014,13677503..13677621,13686075..13686212,13704564..13704654,13704747..13704933,13743932..13744157,13808862..13808924,13875885..13876195))
location: region:13585131-13876195:-1
so has part: feature:13875885-13876195:-1:exon
so has part: feature:13808862-13808924:-1:exon
so has part: feature:13743932-13744157:-1:exon
so has part: feature:13704747-13704933:-1:exon
so has part: feature:13704564-13704654:-1:exon
so has part: feature:13686075-13686212:-1:exon
so has part: feature:13677503-13677621:-1:exon
so has part: feature:13674765-13675014:-1:exon
so has part: feature:13672988-13673106:-1:exon
so has part: feature:13659814-13659924:-1:exon
so has part: feature:13648167-13648245:-1:exon
so has part: feature:13630127-13630315:-1:exon
so has part: feature:13585131-13588137:-1:exon

position:13876195:-1
position: 13876195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13875885-13876195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13808862-13808924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13743932-13744157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13704747-13704933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13704564-13704654:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13686075-13686212:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13677503-13677621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13674765-13675014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13672988-13673106:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13659814-13659924:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13648167-13648245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13630127-13630315:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13585131-13588137:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X2
translation: MEPDSIIEDKTIELMNTAVMEDSNEDESLKKNTLWQISNGTSSVIVSRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTGLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(13630154..13630315,13648167..13648245,13659814..13659924,13672988..13673106,13674765..13675014,13677503..13677621,13686075..13686212,13704564..13704654,13704747..13704933,13743932..13744157,13808862..13808924,13875885..13875929))
location: region:13630154-13875929:-1
so has part: feature:13875885-13875929:-1:exon
so has part: feature:13808862-13808924:-1:exon
so has part: feature:13743932-13744157:-1:exon
so has part: feature:13704747-13704933:-1:exon
so has part: feature:13704564-13704654:-1:exon
so has part: feature:13686075-13686212:-1:exon
so has part: feature:13677503-13677621:-1:exon
so has part: feature:13674765-13675014:-1:exon
so has part: feature:13672988-13673106:-1:exon
so has part: feature:13659814-13659924:-1:exon
so has part: feature:13648167-13648245:-1:exon
so has part: feature:13630154-13630315:-1:exon

XP_029439450.1
type: Protein
SIO_000068: ncbiprotein

position:13630154:-1
position: 13630154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13875929:-1
position: 13875929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13875885-13875929:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13808862-13808924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13743932-13744157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13704747-13704933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13704564-13704654:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13686075-13686212:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13677503-13677621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13674765-13675014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13672988-13673106:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13659814-13659924:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13648167-13648245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13630154-13630315:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X1
translation: MEPDSIIEDKTIELMCSVPRSLWLGCSNLVESMCALRCLQSMPSVRCLQNTAVMEDSNEDESLKKNTLWQISNGTSSVIVSRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTGLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(13630154..13630315,13648167..13648245,13659814..13659924,13672988..13673106,13674765..13675014,13677503..13677621,13686075..13686212,13704564..13704654,13704747..13704933,13743932..13744157,13808862..13808924,13852682..13852783,13875885..13875929))
location: region:13630154-13875929:-1
so has part: feature:13875885-13875929:-1:exon
so has part: feature:13852682-13852783:-1:exon
so has part: feature:13808862-13808924:-1:exon
so has part: feature:13743932-13744157:-1:exon
so has part: feature:13704747-13704933:-1:exon
so has part: feature:13704564-13704654:-1:exon
so has part: feature:13686075-13686212:-1:exon
so has part: feature:13677503-13677621:-1:exon
so has part: feature:13674765-13675014:-1:exon
so has part: feature:13672988-13673106:-1:exon
so has part: feature:13659814-13659924:-1:exon
so has part: feature:13648167-13648245:-1:exon
so has part: feature:13630154-13630315:-1:exon

XP_029439449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13875885-13875929:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13852682-13852783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13808862-13808924:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13743932-13744157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13704747-13704933:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13704564-13704654:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13686075-13686212:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13677503-13677621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13674765-13675014:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13672988-13673106:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13659814-13659924:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13648167-13648245:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13630154-13630315:-1:exon

ETF1
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: ETF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13937674..14012108)
location: region:13937674-14012108:-1
so has part: feature:13937674-14012108:-1:exon
subclass of: SO_0000010

115079723
type: Gene
SIO_000068: ncbigene

position:13937674:-1
position: 13937674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14012108:-1
position: 14012108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13937674-14012108:-1:exon

ETF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: ETF1
product: eukaryotic translation termination factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_029583488.1
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: complement(join(13937674..13939873,13940577..13940724,13952401..13952465,13953138..13953293,13955073..13955202,13955842..13956032,13957398..13957536,13982228..13982367,13982957..13983132,14011744..14011836,14011933..14012108))
location: region:13937674-14012108:-1
so has part: feature:14011933-14012108:-1:exon
so has part: feature:14011744-14011836:-1:exon
so has part: feature:13982957-13983132:-1:exon
so has part: feature:13982228-13982367:-1:exon
so has part: feature:13957398-13957536:-1:exon
so has part: feature:13955842-13956032:-1:exon
so has part: feature:13955073-13955202:-1:exon
so has part: feature:13953138-13953293:-1:exon
so has part: feature:13952401-13952465:-1:exon
so has part: feature:13940577-13940724:-1:exon
so has part: feature:13937674-13939873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14011933-14012108:-1:exon

position:14011933:-1
position: 14011933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14011744-14011836:-1:exon

position:14011744:-1
position: 14011744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14011836:-1
position: 14011836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13982957-13983132:-1:exon

position:13982957:-1
position: 13982957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13983132:-1
position: 13983132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13982228-13982367:-1:exon

position:13982228:-1
position: 13982228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13982367:-1
position: 13982367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13957398-13957536:-1:exon

position:13957398:-1
position: 13957398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13957536:-1
position: 13957536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13955842-13956032:-1:exon

position:13955842:-1
position: 13955842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13956032:-1
position: 13956032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13955073-13955202:-1:exon

position:13955073:-1
position: 13955073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13955202:-1
position: 13955202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13953138-13953293:-1:exon

position:13953138:-1
position: 13953138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13953293:-1
position: 13953293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13952401-13952465:-1:exon

position:13952401:-1
position: 13952401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13952465:-1
position: 13952465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13940577-13940724:-1:exon

position:13940577:-1
position: 13940577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13940724:-1
position: 13940724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13937674-13939873:-1:exon

position:13939873:-1
position: 13939873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: ETF1
product: eukaryotic translation termination factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_029583489.1
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: complement(join(13937674..13939873,13940577..13940724,13952401..13952465,13953138..13953293,13955073..13955202,13955842..13956032,13957398..13957536,13982228..13982367,13982957..13983132,14011744..14011836,14011946..14012105))
location: region:13937674-14012105:-1
so has part: feature:14011946-14012105:-1:exon
so has part: feature:14011744-14011836:-1:exon
so has part: feature:13982957-13983132:-1:exon
so has part: feature:13982228-13982367:-1:exon
so has part: feature:13957398-13957536:-1:exon
so has part: feature:13955842-13956032:-1:exon
so has part: feature:13955073-13955202:-1:exon
so has part: feature:13953138-13953293:-1:exon
so has part: feature:13952401-13952465:-1:exon
so has part: feature:13940577-13940724:-1:exon
so has part: feature:13937674-13939873:-1:exon

position:14012105:-1
position: 14012105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14011946-14012105:-1:exon

position:14011946:-1
position: 14011946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14011744-14011836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13982957-13983132:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13982228-13982367:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13957398-13957536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13955842-13956032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13955073-13955202:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13953138-13953293:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13952401-13952465:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13940577-13940724:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13937674-13939873:-1:exon

ETF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: ETF1
product: eukaryotic translation termination factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_029583490.1
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: complement(join(13937674..13939873,13940577..13940724,13952401..13952465,13953138..13953293,13955073..13955202,13955842..13956032,13957398..13957536,13982228..13982367,13982957..13983132,14011744..14011836,14011955..14012100))
location: region:13937674-14012100:-1
so has part: feature:14011955-14012100:-1:exon
so has part: feature:14011744-14011836:-1:exon
so has part: feature:13982957-13983132:-1:exon
so has part: feature:13982228-13982367:-1:exon
so has part: feature:13957398-13957536:-1:exon
so has part: feature:13955842-13956032:-1:exon
so has part: feature:13955073-13955202:-1:exon
so has part: feature:13953138-13953293:-1:exon
so has part: feature:13952401-13952465:-1:exon
so has part: feature:13940577-13940724:-1:exon
so has part: feature:13937674-13939873:-1:exon

position:14012100:-1
position: 14012100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14011955-14012100:-1:exon

position:14011955:-1
position: 14011955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14011744-14011836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13982957-13983132:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13982228-13982367:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13957398-13957536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13955842-13956032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13955073-13955202:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13953138-13953293:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13952401-13952465:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13940577-13940724:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13937674-13939873:-1:exon

ETF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: ETF1
product: eukaryotic translation termination factor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_029583491.1
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: complement(join(13937674..13939873,13940577..13940724,13952401..13952465,13953138..13953293,13955073..13955202,13955842..13956032,13957398..13957536,13982228..13982367,13982957..13983132,14011653..14011770))
location: region:13937674-14011770:-1
so has part: feature:14011653-14011770:-1:exon
so has part: feature:13982957-13983132:-1:exon
so has part: feature:13982228-13982367:-1:exon
so has part: feature:13957398-13957536:-1:exon
so has part: feature:13955842-13956032:-1:exon
so has part: feature:13955073-13955202:-1:exon
so has part: feature:13953138-13953293:-1:exon
so has part: feature:13952401-13952465:-1:exon
so has part: feature:13940577-13940724:-1:exon
so has part: feature:13937674-13939873:-1:exon

position:14011770:-1
position: 14011770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14011653-14011770:-1:exon

position:14011653:-1
position: 14011653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13982957-13983132:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13982228-13982367:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13957398-13957536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13955842-13956032:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13955073-13955202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13953138-13953293:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13952401-13952465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13940577-13940724:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13937674-13939873:-1:exon

ETF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: ETF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic peptide chain release factor subunit 1 isoform X1
translation: MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLRCNGSEEEKVLYLTPEQEKDKSHFIDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFDLDDY
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: complement(join(13939791..13939873,13940577..13940724,13952401..13952465,13953138..13953293,13955073..13955202,13955842..13956032,13957398..13957536,13982228..13982367,13982957..13983132,14011744..14011829))
location: region:13939791-14011829:-1
so has part: feature:14011744-14011829:-1:exon
so has part: feature:13982957-13983132:-1:exon
so has part: feature:13982228-13982367:-1:exon
so has part: feature:13957398-13957536:-1:exon
so has part: feature:13955842-13956032:-1:exon
so has part: feature:13955073-13955202:-1:exon
so has part: feature:13953138-13953293:-1:exon
so has part: feature:13952401-13952465:-1:exon
so has part: feature:13940577-13940724:-1:exon
so has part: feature:13939791-13939873:-1:exon

XP_029439348.1
type: Protein
SIO_000068: ncbiprotein

position:13939791:-1
position: 13939791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14011829:-1
position: 14011829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14011744-14011829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13982957-13983132:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13982228-13982367:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13957398-13957536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13955842-13956032:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13955073-13955202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13953138-13953293:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13952401-13952465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13940577-13940724:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13939791-13939873:-1:exon

ETF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: ETF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic peptide chain release factor subunit 1 isoform X1
translation: MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLRCNGSEEEKVLYLTPEQEKDKSHFIDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFDLDDY
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: complement(join(13939791..13939873,13940577..13940724,13952401..13952465,13953138..13953293,13955073..13955202,13955842..13956032,13957398..13957536,13982228..13982367,13982957..13983132,14011744..14011829))
location: region:13939791-14011829:-1
so has part: feature:14011744-14011829:-1:exon
so has part: feature:13982957-13983132:-1:exon
so has part: feature:13982228-13982367:-1:exon
so has part: feature:13957398-13957536:-1:exon
so has part: feature:13955842-13956032:-1:exon
so has part: feature:13955073-13955202:-1:exon
so has part: feature:13953138-13953293:-1:exon
so has part: feature:13952401-13952465:-1:exon
so has part: feature:13940577-13940724:-1:exon
so has part: feature:13939791-13939873:-1:exon

XP_029439349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14011744-14011829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13982957-13983132:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13982228-13982367:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13957398-13957536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13955842-13956032:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13955073-13955202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13953138-13953293:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13952401-13952465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13940577-13940724:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13939791-13939873:-1:exon

ETF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: ETF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic peptide chain release factor subunit 1 isoform X1
translation: MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLRCNGSEEEKVLYLTPEQEKDKSHFIDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFDLDDY
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: complement(join(13939791..13939873,13940577..13940724,13952401..13952465,13953138..13953293,13955073..13955202,13955842..13956032,13957398..13957536,13982228..13982367,13982957..13983132,14011744..14011829))
location: region:13939791-14011829:-1
so has part: feature:14011744-14011829:-1:exon
so has part: feature:13982957-13983132:-1:exon
so has part: feature:13982228-13982367:-1:exon
so has part: feature:13957398-13957536:-1:exon
so has part: feature:13955842-13956032:-1:exon
so has part: feature:13955073-13955202:-1:exon
so has part: feature:13953138-13953293:-1:exon
so has part: feature:13952401-13952465:-1:exon
so has part: feature:13940577-13940724:-1:exon
so has part: feature:13939791-13939873:-1:exon

XP_029439350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14011744-14011829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13982957-13983132:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13982228-13982367:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13957398-13957536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13955842-13956032:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13955073-13955202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13953138-13953293:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13952401-13952465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13940577-13940724:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13939791-13939873:-1:exon

ETF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: ETF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic peptide chain release factor subunit 1 isoform X2
translation: MISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLRCNGSEEEKVLYLTPEQEKDKSHFIDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFDLDDY
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: complement(join(13939791..13939873,13940577..13940724,13952401..13952465,13953138..13953293,13955073..13955202,13955842..13956032,13957398..13957536,13982228..13982367,13982957..13983119))
location: region:13939791-13983119:-1
so has part: feature:13982957-13983119:-1:exon
so has part: feature:13982228-13982367:-1:exon
so has part: feature:13957398-13957536:-1:exon
so has part: feature:13955842-13956032:-1:exon
so has part: feature:13955073-13955202:-1:exon
so has part: feature:13953138-13953293:-1:exon
so has part: feature:13952401-13952465:-1:exon
so has part: feature:13940577-13940724:-1:exon
so has part: feature:13939791-13939873:-1:exon

XP_029439351.1
type: Protein
SIO_000068: ncbiprotein

position:13983119:-1
position: 13983119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13982957-13983119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13982228-13982367:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13957398-13957536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13955842-13956032:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13955073-13955202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13953138-13953293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13952401-13952465:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13940577-13940724:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13939791-13939873:-1:exon

HSPA9
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: HSPA9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(14034802..14120611)
location: region:14034802-14120611:-1
so has part: feature:14034802-14120611:-1:exon
subclass of: SO_0000010

115079643
type: Gene
SIO_000068: ncbigene

position:14034802:-1
position: 14034802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14120611:-1
position: 14120611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14034802-14120611:-1:exon

HSPA9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: HSPA9
product: heat shock protein family A (Hsp70) member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029583357.1
SIO_010081: HSPA9
subclass of: SO_0000673
so part of: HSPA9
location: complement(join(14034802..14035561,14037303..14037443,14037723..14037815,14039105..14039199,14045207..14045324,14051316..14051418,14054617..14054813,14058218..14058466,14081454..14081546,14081839..14082001,14082883..14082989,14084645..14084718,14091730..14091854,14097143..14097324,14108190..14108277,14117407..14117465,14120117..14120611))
location: region:14034802-14120611:-1
so has part: feature:14120117-14120611:-1:exon
so has part: feature:14117407-14117465:-1:exon
so has part: feature:14108190-14108277:-1:exon
so has part: feature:14097143-14097324:-1:exon
so has part: feature:14091730-14091854:-1:exon
so has part: feature:14084645-14084718:-1:exon
so has part: feature:14082883-14082989:-1:exon
so has part: feature:14081839-14082001:-1:exon
so has part: feature:14081454-14081546:-1:exon
so has part: feature:14058218-14058466:-1:exon
so has part: feature:14054617-14054813:-1:exon
so has part: feature:14051316-14051418:-1:exon
so has part: feature:14045207-14045324:-1:exon
so has part: feature:14039105-14039199:-1:exon
so has part: feature:14037723-14037815:-1:exon
so has part: feature:14037303-14037443:-1:exon
so has part: feature:14034802-14035561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14120117-14120611:-1:exon

position:14120117:-1
position: 14120117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14117407-14117465:-1:exon

position:14117407:-1
position: 14117407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14117465:-1
position: 14117465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14108190-14108277:-1:exon

position:14108190:-1
position: 14108190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14108277:-1
position: 14108277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14097143-14097324:-1:exon

position:14097143:-1
position: 14097143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14097324:-1
position: 14097324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14091730-14091854:-1:exon

position:14091730:-1
position: 14091730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14091854:-1
position: 14091854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14084645-14084718:-1:exon

position:14084645:-1
position: 14084645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14084718:-1
position: 14084718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14082883-14082989:-1:exon

position:14082883:-1
position: 14082883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14082989:-1
position: 14082989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14081839-14082001:-1:exon

position:14081839:-1
position: 14081839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14082001:-1
position: 14082001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:14081454-14081546:-1:exon

position:14081454:-1
position: 14081454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14081546:-1
position: 14081546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:14058218-14058466:-1:exon

position:14058218:-1
position: 14058218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14058466:-1
position: 14058466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:14054617-14054813:-1:exon

position:14054617:-1
position: 14054617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14054813:-1
position: 14054813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:14051316-14051418:-1:exon

position:14051316:-1
position: 14051316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14051418:-1
position: 14051418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:14045207-14045324:-1:exon

position:14045207:-1
position: 14045207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14045324:-1
position: 14045324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:14039105-14039199:-1:exon

position:14039105:-1
position: 14039105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14039199:-1
position: 14039199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:14037723-14037815:-1:exon

position:14037723:-1
position: 14037723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14037815:-1
position: 14037815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:14037303-14037443:-1:exon

position:14037303:-1
position: 14037303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14037443:-1
position: 14037443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:14034802-14035561:-1:exon

position:14035561:-1
position: 14035561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSPA9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: HSPA9
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(14058251..14058253), aa:OTHER)
product: LOW QUALITY PROTEIN: stress-70 protein, mitochondrial
translation: MLSAGVCVSRLLQRPQSRRASRSLLTCARQGSWNGLSQDILGKVSRRDYASEAIKGAVVGIDLGTTNSCVAVMEGKQAKVLENSEGARTTPSVIAFSADGERLVGMPAKRQSVTNPNNTLYATKRLIGRRYDDPEVQKDIKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHSIKNAVITVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGLDKSEDKVIAVYDLGGGTFDISVLEIQKGVFEVKSTNGDTFLGGEDFDQALLRYIVKEFKRETGVDLTKDNMALQRVREASEKAKCELSSSVQTDINLPYLTMDSSGPKHLNMKLTRSQFEGIVADLIKRTIAPCQKAMQDAEVSKSDVGEVLLVGGMTRMPKVXSSFLFIFLSWRLQVKAVNPDEAVAIGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMANDNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNSAEGIIHDTESKMEEFKDQLPADECNKLKEEIAKMRELLARKDTETGENIRQAASSLQQASLKLFEMAYKKMASEREGAGSADHKEDQKEEKQ
SIO_010081: HSPA9
subclass of: SO_0000673
so part of: HSPA9
location: complement(join(14035493..14035561,14037303..14037443,14037723..14037815,14039105..14039199,14045207..14045324,14051316..14051418,14054617..14054813,14058218..14058466,14081454..14081546,14081839..14082001,14082883..14082989,14084645..14084718,14091730..14091854,14097143..14097324,14108190..14108277,14117407..14117465,14120117..14120206))
location: region:14035493-14120206:-1
so has part: feature:14120117-14120206:-1:exon
so has part: feature:14117407-14117465:-1:exon
so has part: feature:14108190-14108277:-1:exon
so has part: feature:14097143-14097324:-1:exon
so has part: feature:14091730-14091854:-1:exon
so has part: feature:14084645-14084718:-1:exon
so has part: feature:14082883-14082989:-1:exon
so has part: feature:14081839-14082001:-1:exon
so has part: feature:14081454-14081546:-1:exon
so has part: feature:14058218-14058466:-1:exon
so has part: feature:14054617-14054813:-1:exon
so has part: feature:14051316-14051418:-1:exon
so has part: feature:14045207-14045324:-1:exon
so has part: feature:14039105-14039199:-1:exon
so has part: feature:14037723-14037815:-1:exon
so has part: feature:14037303-14037443:-1:exon
so has part: feature:14035493-14035561:-1:exon

XP_029439217.1
type: Protein
SIO_000068: ncbiprotein

position:14035493:-1
position: 14035493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14120206:-1
position: 14120206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14120117-14120206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14117407-14117465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14108190-14108277:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14097143-14097324:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14091730-14091854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14084645-14084718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14082883-14082989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14081839-14082001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14081454-14081546:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14058218-14058466:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14054617-14054813:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14051316-14051418:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14045207-14045324:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14039105-14039199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14037723-14037815:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14037303-14037443:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14035493-14035561:-1:exon

LOC115080098
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115080098
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(14051577..14051643)
location: region:14051577-14051643:-1
so has part: feature:14051577-14051643:-1:exon
subclass of: SO_0000578

115080098
type: Gene
SIO_000068: ncbigene

position:14051577:-1
position: 14051577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14051643:-1
position: 14051643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14051577-14051643:-1:exon

LOC115080098
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: snoRNA
gene: LOC115080098
product: small nucleolar RNA SNORD63
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00154
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003853519.1
SIO_010081: LOC115080098
subclass of: SO_0000673
so part of: LOC115080098
location: complement(14051577..14051643)
location: region:14051577-14051643:-1
so has part: feature:14051577-14051643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14051577-14051643:-1:exon

LOC115080044
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115080044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 14874335..14876591
location: region:14874335-14876591:1
so has part: feature:14874335-14876591:1:exon
subclass of: SO_0000011

115080044
type: Gene
SIO_000068: ncbigene

position:14874335:1
position: 14874335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14876591:1
position: 14876591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14874335-14876591:1:exon

LOC115080044
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115080044
product: uncharacterized LOC115080044
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003853497.1
SIO_010081: LOC115080044
subclass of: SO_0000673
so part of: LOC115080044
location: join(14874335..14876188,14876301..14876391,14876476..14876591)
location: region:14874335-14876591:1
so has part: feature:14874335-14876188:1:exon
so has part: feature:14876301-14876391:1:exon
so has part: feature:14876476-14876591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14874335-14876188:1:exon

position:14876188:1
position: 14876188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14876301-14876391:1:exon

position:14876301:1
position: 14876301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14876391:1
position: 14876391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14876476-14876591:1:exon

position:14876476:1
position: 14876476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CTNNA1
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: CTNNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15106185..15438340
location: region:15106185-15438340:1
so has part: feature:15106185-15438340:1:exon
subclass of: SO_0000010

115079708
type: Gene
SIO_000068: ncbigene

position:15106185:1
position: 15106185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15438340:1
position: 15438340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15106185-15438340:1:exon

CTNNA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: CTNNA1
product: catenin alpha 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029583454.1
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: join(15106185..15106523,15147668..15147727,15151063..15151171,15196075..15196270,15219469..15219635,15229971..15230090,15260425..15260692,15267023..15267226,15322295..15322375,15338107..15338259,15349784..15349876,15364385..15364541,15377474..15377674,15378165..15378316,15382556..15382666,15398534..15398715,15408517..15408622,15426909..15427043,15437320..15438340)
location: region:15106185-15438340:1
so has part: feature:15106185-15106523:1:exon
so has part: feature:15147668-15147727:1:exon
so has part: feature:15151063-15151171:1:exon
so has part: feature:15196075-15196270:1:exon
so has part: feature:15219469-15219635:1:exon
so has part: feature:15229971-15230090:1:exon
so has part: feature:15260425-15260692:1:exon
so has part: feature:15267023-15267226:1:exon
so has part: feature:15322295-15322375:1:exon
so has part: feature:15338107-15338259:1:exon
so has part: feature:15349784-15349876:1:exon
so has part: feature:15364385-15364541:1:exon
so has part: feature:15377474-15377674:1:exon
so has part: feature:15378165-15378316:1:exon
so has part: feature:15382556-15382666:1:exon
so has part: feature:15398534-15398715:1:exon
so has part: feature:15408517-15408622:1:exon
so has part: feature:15426909-15427043:1:exon
so has part: feature:15437320-15438340:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15106185-15106523:1:exon

position:15106523:1
position: 15106523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15147668-15147727:1:exon

position:15147668:1
position: 15147668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15147727:1
position: 15147727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15151063-15151171:1:exon

position:15151063:1
position: 15151063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15151171:1
position: 15151171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15196075-15196270:1:exon

position:15196075:1
position: 15196075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15196270:1
position: 15196270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15219469-15219635:1:exon

position:15219469:1
position: 15219469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15219635:1
position: 15219635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15229971-15230090:1:exon

position:15229971:1
position: 15229971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15230090:1
position: 15230090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15260425-15260692:1:exon

position:15260425:1
position: 15260425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15260692:1
position: 15260692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:15267023-15267226:1:exon

position:15267023:1
position: 15267023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15267226:1
position: 15267226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:15322295-15322375:1:exon

position:15322295:1
position: 15322295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15322375:1
position: 15322375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:15338107-15338259:1:exon

position:15338107:1
position: 15338107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15338259:1
position: 15338259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:15349784-15349876:1:exon

position:15349784:1
position: 15349784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15349876:1
position: 15349876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:15364385-15364541:1:exon

position:15364385:1
position: 15364385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15364541:1
position: 15364541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:15377474-15377674:1:exon

position:15377474:1
position: 15377474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15377674:1
position: 15377674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:15378165-15378316:1:exon

position:15378165:1
position: 15378165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15378316:1
position: 15378316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:15382556-15382666:1:exon

position:15382556:1
position: 15382556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15382666:1
position: 15382666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:15398534-15398715:1:exon

position:15398534:1
position: 15398534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15398715:1
position: 15398715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:15408517-15408622:1:exon

position:15408517:1
position: 15408517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15408622:1
position: 15408622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:15426909-15427043:1:exon

position:15426909:1
position: 15426909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15427043:1
position: 15427043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:15437320-15438340:1:exon

position:15437320:1
position: 15437320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CTNNA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: CTNNA1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: catenin alpha-1
translation: MVKSKMTSINAGNINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNTSNKGPSNKKKGRSKKAHVLAASVEQATQNFLEKGDKIAKESQFLKEELIAAVDDVRKQGEVMRTSSGEFADDPCSSVKRGTMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEEGIVKLRNAGTEQDLGIQYKALKAEVDKLNIMTAKRQQELKDVGHRDQMAAARGILQKNIPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAAQATXPQKKLCSAAGWRGELAFALNNFDKQIIVDPLNFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNSVRQALQDLLSEYMGNTGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKVAQETMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFAEQVEAAVEALSGDSSQTMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMESI
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: join(15147717..15147727,15151063..15151171,15196075..15196270,15219469..15219635,15229971..15230090,15260425..15260692,15267023..15267226,15322295..15322375,15338107..15338259,15349784..15349876,15364385..15364541,15377474..15377674,15378165..15378316,15382556..15382666,15398534..15398715,15408517..15408622,15426909..15427043,15437320..15437607)
location: region:15147717-15437607:1
so has part: feature:15147717-15147727:1:exon
so has part: feature:15151063-15151171:1:exon
so has part: feature:15196075-15196270:1:exon
so has part: feature:15219469-15219635:1:exon
so has part: feature:15229971-15230090:1:exon
so has part: feature:15260425-15260692:1:exon
so has part: feature:15267023-15267226:1:exon
so has part: feature:15322295-15322375:1:exon
so has part: feature:15338107-15338259:1:exon
so has part: feature:15349784-15349876:1:exon
so has part: feature:15364385-15364541:1:exon
so has part: feature:15377474-15377674:1:exon
so has part: feature:15378165-15378316:1:exon
so has part: feature:15382556-15382666:1:exon
so has part: feature:15398534-15398715:1:exon
so has part: feature:15408517-15408622:1:exon
so has part: feature:15426909-15427043:1:exon
so has part: feature:15437320-15437607:1:exon

XP_029439314.1
type: Protein
SIO_000068: ncbiprotein

position:15147717:1
position: 15147717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15437607:1
position: 15437607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15147717-15147727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15151063-15151171:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15196075-15196270:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15219469-15219635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15229971-15230090:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15260425-15260692:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15267023-15267226:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15322295-15322375:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15338107-15338259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15349784-15349876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15364385-15364541:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15377474-15377674:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15378165-15378316:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15382556-15382666:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15398534-15398715:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15408517-15408622:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15426909-15427043:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15437320-15437607:1:exon

LRRTM2
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LRRTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15287208..15289144)
location: region:15287208-15289144:-1
so has part: feature:15287208-15289144:-1:exon
subclass of: SO_0000010

115080037
type: Gene
SIO_000068: ncbigene

position:15287208:-1
position: 15287208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15289144:-1
position: 15289144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15287208-15289144:-1:exon

LRRTM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: LRRTM2
product: leucine rich repeat transmembrane neuronal 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029584063.1
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(15287208..15289144)
location: region:15287208-15289144:-1
so has part: feature:15287208-15289144:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15287208-15289144:-1:exon

LRRTM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: LRRTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat transmembrane neuronal protein 2
translation: MNTFCRLPKLYSAGLHSKWPLGTPMLTALYVMSVVSEVMPAWGMACPPKCRCEKLLFYCDSQGFHSVPNHIDKGSLGLSLRHNVISELQQDQFASFSQLTWLHLDHNQIATVQEDAFQGLYKLNELILSSNKISYLSNTTFSQLLNLQNLDVSFNQLPSLHPELFYGLRKLQSLHLRSNFLRTIPVRLFWDCRSLDFLDLSTNRLRSLSRNGFAGLVKLRELHLEHNHLTKINFAHFLRLTGLQTLFLQWNKISNLTCGMEWTWDTLEKLDLTGNEIKAIELTVFETLPSLKILLMDNNKLQTLDFKLLNSLKSLATVGLSGNPWECNSKVCALATWLSSFKGRWEHSILCHSPDHTQGEDILDAVYGFQLCWNLSAVVTSITTSYKPLITESTVRSSSNLYVGDRESQTTASTAVTTDEHSLELDNAIFTQQVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSVIQNRQLRSKTQLHVSNTSEQGPYNEYEPPHEGPFIIINGYGQCKCQQLPYKECEV
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(15287564..15289144)
location: region:15287564-15289144:-1
so has part: feature:15287564-15289144:-1:exon

XP_029439923.1
type: Protein
SIO_000068: ncbiprotein

position:15287564:-1
position: 15287564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15287564-15289144:-1:exon

SIL1
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: SIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15805499..16190205)
location: region:15805499-16190205:-1
so has part: feature:15805499-16190205:-1:exon
subclass of: SO_0000010

115079820
type: Gene
SIO_000068: ncbigene

position:15805499:-1
position: 15805499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16190205:-1
position: 16190205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15805499-16190205:-1:exon

SIL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: SIL1
product: SIL1 nucleotide exchange factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029583703.1
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(15805499..15806672,15826033..15826129,15992693..15992814,16018802..16018993,16064972..16065077,16066039..16066159,16170644..16170779,16171159..16171270,16190183..16190205))
location: region:15805499-16190205:-1
so has part: feature:16190183-16190205:-1:exon
so has part: feature:16171159-16171270:-1:exon
so has part: feature:16170644-16170779:-1:exon
so has part: feature:16066039-16066159:-1:exon
so has part: feature:16064972-16065077:-1:exon
so has part: feature:16018802-16018993:-1:exon
so has part: feature:15992693-15992814:-1:exon
so has part: feature:15826033-15826129:-1:exon
so has part: feature:15805499-15806672:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16190183-16190205:-1:exon

position:16190183:-1
position: 16190183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16171159-16171270:-1:exon

position:16171159:-1
position: 16171159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16171270:-1
position: 16171270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16170644-16170779:-1:exon

position:16170644:-1
position: 16170644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16170779:-1
position: 16170779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16066039-16066159:-1:exon

position:16066039:-1
position: 16066039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16066159:-1
position: 16066159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16064972-16065077:-1:exon

position:16064972:-1
position: 16064972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16065077:-1
position: 16065077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16018802-16018993:-1:exon

position:16018802:-1
position: 16018802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16018993:-1
position: 16018993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15992693-15992814:-1:exon

position:15992693:-1
position: 15992693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15992814:-1
position: 15992814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:15826033-15826129:-1:exon

position:15826033:-1
position: 15826033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15826129:-1
position: 15826129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:15805499-15806672:-1:exon

position:15806672:-1
position: 15806672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: SIL1
product: SIL1 nucleotide exchange factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029583702.1
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(15805499..15806672,15816441..15816605,15826033..15826129,15992693..15992814,16018802..16018993,16064972..16065077,16066039..16066159,16170644..16170779,16171159..16171270,16190183..16190204))
location: region:15805499-16190204:-1
so has part: feature:16190183-16190204:-1:exon
so has part: feature:16171159-16171270:-1:exon
so has part: feature:16170644-16170779:-1:exon
so has part: feature:16066039-16066159:-1:exon
so has part: feature:16064972-16065077:-1:exon
so has part: feature:16018802-16018993:-1:exon
so has part: feature:15992693-15992814:-1:exon
so has part: feature:15826033-15826129:-1:exon
so has part: feature:15816441-15816605:-1:exon
so has part: feature:15805499-15806672:-1:exon

position:16190204:-1
position: 16190204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16190183-16190204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16171159-16171270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16170644-16170779:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16066039-16066159:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16064972-16065077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16018802-16018993:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15992693-15992814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15826033-15826129:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15816441-15816605:-1:exon

position:15816441:-1
position: 15816441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15816605:-1
position: 15816605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:15805499-15806672:-1:exon

SIL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: SIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleotide exchange factor SIL1 isoform X2
translation: MNCLAYLASSALRWNLILLLSAFLFCSCLSEQTPEFALTEVKEKKMHETENEEVTVEDELDPEDQEAFYPTREWQTVKPGQAVPAGLHMRLNLQTGKNEARIPDPENEKNGMKYKKKDKRLGKVNVDSNLYTPQELKKALAKFKEGVTESTEEEKAKLEGIKQKFRPIDELKKEFEELNMQIETDFEIMTKLISKFNSSNSSLDEKAAALNDLEYYVHQVDNAQNMLCVGGLQLVINELNGTEAVLKELSAFVLGSALSSNPKVQVEAIEGGALQKLLMILGTEQPLSLKKKALLHDFEGNSEQMKEKIEQYEQINLVPVIMEQGWCTIISDLLGMPEHDTREKVLKTVHLLMASCRDQYREDQKLNSTLNILRREYEELVSEEQKSGENDSYFRELLINVNEILQNLR
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(15806319..15806672,15826033..15826129,15992693..15992814,16018802..16018993,16064972..16065077,16066039..16066159,16170644..16170779,16171159..16171260))
location: region:15806319-16171260:-1
so has part: feature:16171159-16171260:-1:exon
so has part: feature:16170644-16170779:-1:exon
so has part: feature:16066039-16066159:-1:exon
so has part: feature:16064972-16065077:-1:exon
so has part: feature:16018802-16018993:-1:exon
so has part: feature:15992693-15992814:-1:exon
so has part: feature:15826033-15826129:-1:exon
so has part: feature:15806319-15806672:-1:exon

XP_029439563.1
type: Protein
SIO_000068: ncbiprotein

position:15806319:-1
position: 15806319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16171260:-1
position: 16171260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16171159-16171260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16170644-16170779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16066039-16066159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16064972-16065077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16018802-16018993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15992693-15992814:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15826033-15826129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15806319-15806672:-1:exon

SIL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: SIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleotide exchange factor SIL1 isoform X1
translation: MNCLAYLASSALRWNLILLLSAFLFCSCLSEQTPEFALTEVKEKKMHETENEEVTVEDELDPEDQEAFYPTREWQTVKPGQAVPAGLHMRLNLQTGKNEARIPDPENEKNGMKYKKKDKRLGKVNVDSNLYTPQELKKALAKFKEGVTESTEEEKAKLEGIKQKFRPIDELKKEFEELNMQIETDFEIMTKLISKFNSSNSSLDEKAAALNDLEYYVHQVDNAQNMLCVGGLQLVINELNGTEAVLKELSAFVLGSALSSNPKVQVEAIEGGALQKLLMILGTEQPLSLKKKALFALSSMLRHFPYAQQQFLKHGGLQILRSFFREKGAEVLCIRVVTLLYDMIVEKALLHDFEGNSEQMKEKIEQYEQINLVPVIMEQGWCTIISDLLGMPEHDTREKVLKTVHLLMASCRDQYREDQKLNSTLNILRREYEELVSEEQKSGENDSYFRELLINVNEILQNLR
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(15806319..15806672,15816441..15816605,15826033..15826129,15992693..15992814,16018802..16018993,16064972..16065077,16066039..16066159,16170644..16170779,16171159..16171260))
location: region:15806319-16171260:-1
so has part: feature:16171159-16171260:-1:exon
so has part: feature:16170644-16170779:-1:exon
so has part: feature:16066039-16066159:-1:exon
so has part: feature:16064972-16065077:-1:exon
so has part: feature:16018802-16018993:-1:exon
so has part: feature:15992693-15992814:-1:exon
so has part: feature:15826033-15826129:-1:exon
so has part: feature:15816441-15816605:-1:exon
so has part: feature:15806319-15806672:-1:exon

XP_029439562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16171159-16171260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16170644-16170779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16066039-16066159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16064972-16065077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16018802-16018993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15992693-15992814:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15826033-15826129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15816441-15816605:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15806319-15806672:-1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 16461162..16461235
location: region:16461162-16461235:1
so has part: feature:16461162-16461235:1:exon
subclass of: SO_0000663

115080108
type: Gene
SIO_000068: ncbigene

position:16461162:1
position: 16461162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16461235:1
position: 16461235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16461162-16461235:1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 194408
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:16461196..16461198,aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: 16461162..16461235
location: region:16461162-16461235:1
so has part: feature:16461162-16461235:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16461162-16461235:1:exon

TRNAI-AAU
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: TRNAI-AAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(16462211..16462284)
location: region:16462211-16462284:-1
so has part: feature:16462211-16462284:-1:exon
subclass of: SO_0000663

115080103
type: Gene
SIO_000068: ncbigene

position:16462211:-1
position: 16462211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16462284:-1
position: 16462284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16462211-16462284:-1:exon

TRNAI-AAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 194408
gene: TRNAI-AAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(16462248..16462250),aa:Ile, seq:aat)
SIO_010081: TRNAI-AAU
subclass of: SO_0000673
so part of: TRNAI-AAU
location: complement(16462211..16462284)
location: region:16462211-16462284:-1
so has part: feature:16462211-16462284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16462211-16462284:-1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 16462563..16462636
location: region:16462563-16462636:1
so has part: feature:16462563-16462636:1:exon
subclass of: SO_0000663

115080109
type: Gene
SIO_000068: ncbigene

position:16462563:1
position: 16462563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16462636:1
position: 16462636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16462563-16462636:1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 194408
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:16462597..16462599,aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: 16462563..16462636
location: region:16462563-16462636:1
so has part: feature:16462563-16462636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16462563-16462636:1:exon

TRNAI-AAU
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: TRNAI-AAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(16463613..16463686)
location: region:16463613-16463686:-1
so has part: feature:16463613-16463686:-1:exon
subclass of: SO_0000663

115080104
type: Gene
SIO_000068: ncbigene

position:16463613:-1
position: 16463613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16463686:-1
position: 16463686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16463613-16463686:-1:exon

TRNAI-AAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 194408
gene: TRNAI-AAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(16463650..16463652),aa:Ile, seq:aat)
SIO_010081: TRNAI-AAU
subclass of: SO_0000673
so part of: TRNAI-AAU
location: complement(16463613..16463686)
location: region:16463613-16463686:-1
so has part: feature:16463613-16463686:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16463613-16463686:-1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 16463965..16464038
location: region:16463965-16464038:1
so has part: feature:16463965-16464038:1:exon
subclass of: SO_0000663

115080110
type: Gene
SIO_000068: ncbigene

position:16463965:1
position: 16463965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16464038:1
position: 16464038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16463965-16464038:1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 194408
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:16463999..16464001,aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: 16463965..16464038
location: region:16463965-16464038:1
so has part: feature:16463965-16464038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16463965-16464038:1:exon

TRNAI-AAU
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: TRNAI-AAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(16465015..16465088)
location: region:16465015-16465088:-1
so has part: feature:16465015-16465088:-1:exon
subclass of: SO_0000663

115080105
type: Gene
SIO_000068: ncbigene

position:16465015:-1
position: 16465015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16465088:-1
position: 16465088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16465015-16465088:-1:exon

TRNAI-AAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 194408
gene: TRNAI-AAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(16465052..16465054),aa:Ile, seq:aat)
SIO_010081: TRNAI-AAU
subclass of: SO_0000673
so part of: TRNAI-AAU
location: complement(16465015..16465088)
location: region:16465015-16465088:-1
so has part: feature:16465015-16465088:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16465015-16465088:-1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 16465367..16465440
location: region:16465367-16465440:1
so has part: feature:16465367-16465440:1:exon
subclass of: SO_0000663

115080111
type: Gene
SIO_000068: ncbigene

position:16465367:1
position: 16465367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16465440:1
position: 16465440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16465367-16465440:1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 194408
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:16465401..16465403,aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: 16465367..16465440
location: region:16465367-16465440:1
so has part: feature:16465367-16465440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16465367-16465440:1:exon

TRNAI-AAU
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: TRNAI-AAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(16466416..16466489)
location: region:16466416-16466489:-1
so has part: feature:16466416-16466489:-1:exon
subclass of: SO_0000663

115080106
type: Gene
SIO_000068: ncbigene

position:16466416:-1
position: 16466416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16466489:-1
position: 16466489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16466416-16466489:-1:exon

TRNAI-AAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 194408
gene: TRNAI-AAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(16466453..16466455),aa:Ile, seq:aat)
SIO_010081: TRNAI-AAU
subclass of: SO_0000673
so part of: TRNAI-AAU
location: complement(16466416..16466489)
location: region:16466416-16466489:-1
so has part: feature:16466416-16466489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16466416-16466489:-1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 16466768..16466841
location: region:16466768-16466841:1
so has part: feature:16466768-16466841:1:exon
subclass of: SO_0000663

115080100
type: Gene
SIO_000068: ncbigene

position:16466768:1
position: 16466768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16466841:1
position: 16466841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16466768-16466841:1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 194408
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:16466802..16466804,aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: 16466768..16466841
location: region:16466768-16466841:1
so has part: feature:16466768-16466841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16466768-16466841:1:exon

TRNAI-AAU
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: TRNAI-AAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(16467747..16467820)
location: region:16467747-16467820:-1
so has part: feature:16467747-16467820:-1:exon
subclass of: SO_0000663

115080107
type: Gene
SIO_000068: ncbigene

position:16467747:-1
position: 16467747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16467820:-1
position: 16467820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16467747-16467820:-1:exon

TRNAI-AAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 194408
gene: TRNAI-AAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(16467784..16467786),aa:Ile, seq:aat)
SIO_010081: TRNAI-AAU
subclass of: SO_0000673
so part of: TRNAI-AAU
location: complement(16467747..16467820)
location: region:16467747-16467820:-1
so has part: feature:16467747-16467820:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16467747-16467820:-1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 16468099..16468172
location: region:16468099-16468172:1
so has part: feature:16468099-16468172:1:exon
subclass of: SO_0000663

115080101
type: Gene
SIO_000068: ncbigene

position:16468099:1
position: 16468099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16468172:1
position: 16468172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16468099-16468172:1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 194408
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:16468133..16468135,aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: 16468099..16468172
location: region:16468099-16468172:1
so has part: feature:16468099-16468172:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16468099-16468172:1:exon

LOC115079739
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115079739
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16535222..16535959
location: region:16535222-16535959:1
so has part: feature:16535222-16535959:1:exon
subclass of: SO_0000011

115079739
type: Gene
SIO_000068: ncbigene

position:16535222:1
position: 16535222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16535959:1
position: 16535959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16535222-16535959:1:exon

LOC115079739
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115079739
product: uncharacterized LOC115079739
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003853361.1
SIO_010081: LOC115079739
subclass of: SO_0000673
so part of: LOC115079739
location: join(16535222..16535312,16535434..16535553,16535667..16535959)
location: region:16535222-16535959:1
so has part: feature:16535222-16535312:1:exon
so has part: feature:16535434-16535553:1:exon
so has part: feature:16535667-16535959:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16535222-16535312:1:exon

position:16535312:1
position: 16535312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16535434-16535553:1:exon

position:16535434:1
position: 16535434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16535553:1
position: 16535553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16535667-16535959:1:exon

position:16535667:1
position: 16535667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PANK3
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: PANK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16617936..16814586
location: region:16617936-16814586:1
so has part: feature:16617936-16814586:1:exon
subclass of: SO_0000010

115079572
type: Gene
SIO_000068: ncbigene

position:16617936:1
position: 16617936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16814586:1
position: 16814586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16617936-16814586:1:exon

PANK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: PANK3
product: pantothenate kinase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029583219.1
SIO_010081: PANK3
subclass of: SO_0000673
so part of: PANK3
location: join(16617936..16618283,16671216..16671568,16697067..16697320,16706336..16706512,16709195..16709318,16734707..16734832,16786861..16786995,16811817..16811862,16813948..16814586)
location: region:16617936-16814586:1
so has part: feature:16617936-16618283:1:exon
so has part: feature:16671216-16671568:1:exon
so has part: feature:16697067-16697320:1:exon
so has part: feature:16706336-16706512:1:exon
so has part: feature:16709195-16709318:1:exon
so has part: feature:16734707-16734832:1:exon
so has part: feature:16786861-16786995:1:exon
so has part: feature:16811817-16811862:1:exon
so has part: feature:16813948-16814586:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16617936-16618283:1:exon

position:16618283:1
position: 16618283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16671216-16671568:1:exon

position:16671216:1
position: 16671216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16671568:1
position: 16671568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16697067-16697320:1:exon

position:16697067:1
position: 16697067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16697320:1
position: 16697320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16706336-16706512:1:exon

position:16706336:1
position: 16706336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16706512:1
position: 16706512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16709195-16709318:1:exon

position:16709195:1
position: 16709195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16709318:1
position: 16709318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16734707-16734832:1:exon

position:16734707:1
position: 16734707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16734832:1
position: 16734832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:16786861-16786995:1:exon

position:16786861:1
position: 16786861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16786995:1
position: 16786995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:16811817-16811862:1:exon

position:16811817:1
position: 16811817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16811862:1
position: 16811862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:16813948-16814586:1:exon

position:16813948:1
position: 16813948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PANK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: PANK3
product: pantothenate kinase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029583221.1
SIO_010081: PANK3
subclass of: SO_0000673
so part of: PANK3
location: join(16617936..16618283,16671216..16671568,16697067..16697320,16706336..16706512,16709195..16709318,16734707..16734832,16811817..16811862,16813948..16814584)
location: region:16617936-16814584:1
so has part: feature:16617936-16618283:1:exon
so has part: feature:16671216-16671568:1:exon
so has part: feature:16697067-16697320:1:exon
so has part: feature:16706336-16706512:1:exon
so has part: feature:16709195-16709318:1:exon
so has part: feature:16734707-16734832:1:exon
so has part: feature:16811817-16811862:1:exon
so has part: feature:16813948-16814584:1:exon

position:16814584:1
position: 16814584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16617936-16618283:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16671216-16671568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16697067-16697320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16706336-16706512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16709195-16709318:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16734707-16734832:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16811817-16811862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16813948-16814584:1:exon

PANK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: PANK3
product: pantothenate kinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_029583220.1
SIO_010081: PANK3
subclass of: SO_0000673
so part of: PANK3
location: join(16617936..16618283,16671216..16671568,16697067..16697320,16706336..16706512,16709195..16709318,16734707..16734832,16745427..16750283)
location: region:16617936-16750283:1
so has part: feature:16617936-16618283:1:exon
so has part: feature:16671216-16671568:1:exon
so has part: feature:16697067-16697320:1:exon
so has part: feature:16706336-16706512:1:exon
so has part: feature:16709195-16709318:1:exon
so has part: feature:16734707-16734832:1:exon
so has part: feature:16745427-16750283:1:exon

position:16750283:1
position: 16750283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16617936-16618283:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16671216-16671568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16697067-16697320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16706336-16706512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16709195-16709318:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16734707-16734832:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16745427-16750283:1:exon

position:16745427:1
position: 16745427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PANK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: PANK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pantothenate kinase 3 isoform X1
translation: MKIKDAKKPSFPWFGMDIGGTLVKLAYFEPIDITVEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELKDLKLFERRGNLHFIRFPTHDLPTFIQMGRDKNFSTLHTVLCATGGGAYKFEEDFRTIGNLQLHKLDELDCLVKGLLYIDSVSFNGQAECYYFENASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVSGTSLGGGTFLGLCSLLTGCESFEEALEMAAKGDSTNADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKDKRETVSKEDLARATLVTITNNIGSIARMCAVNEKISRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEIQHYIKSILPETSLPTVFQALDTLLLFDKPDQLSLSVYYKGLRNLILYISVP
SIO_010081: PANK3
subclass of: SO_0000673
so part of: PANK3
location: join(16618256..16618283,16671216..16671568,16697067..16697320,16706336..16706512,16709195..16709318,16734707..16734832,16786861..16786995,16811817..16811840)
location: region:16618256-16811840:1
so has part: feature:16618256-16618283:1:exon
so has part: feature:16671216-16671568:1:exon
so has part: feature:16697067-16697320:1:exon
so has part: feature:16706336-16706512:1:exon
so has part: feature:16709195-16709318:1:exon
so has part: feature:16734707-16734832:1:exon
so has part: feature:16786861-16786995:1:exon
so has part: feature:16811817-16811840:1:exon

XP_029439079.1
type: Protein
SIO_000068: ncbiprotein

position:16618256:1
position: 16618256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16811840:1
position: 16811840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16618256-16618283:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16671216-16671568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16697067-16697320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16706336-16706512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16709195-16709318:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16734707-16734832:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16786861-16786995:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16811817-16811840:1:exon

PANK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: PANK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pantothenate kinase 3 isoform X3
translation: MKIKDAKKPSFPWFGMDIGGTLVKLAYFEPIDITVEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELKDLKLFERRGNLHFIRFPTHDLPTFIQMGRDKNFSTLHTVLCATGGGAYKFEEDFRTIGNLQLHKLDELDCLVKGLLYIDSVSFNGQAECYYFENASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVSGTSLGGGTFLGLCSLLTGCESFEEALEMAAKGDSTNADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKDKRETVSKEDLARATLVTITNNIGSIARMCAVNEKISRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEILYISVP
SIO_010081: PANK3
subclass of: SO_0000673
so part of: PANK3
location: join(16618256..16618283,16671216..16671568,16697067..16697320,16706336..16706512,16709195..16709318,16734707..16734832,16811817..16811840)
location: region:16618256-16811840:1
so has part: feature:16618256-16618283:1:exon
so has part: feature:16671216-16671568:1:exon
so has part: feature:16697067-16697320:1:exon
so has part: feature:16706336-16706512:1:exon
so has part: feature:16709195-16709318:1:exon
so has part: feature:16734707-16734832:1:exon
so has part: feature:16811817-16811840:1:exon

XP_029439081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16618256-16618283:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16671216-16671568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16697067-16697320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16706336-16706512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16709195-16709318:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16734707-16734832:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16811817-16811840:1:exon

PANK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: PANK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pantothenate kinase 3 isoform X2
translation: MKIKDAKKPSFPWFGMDIGGTLVKLAYFEPIDITVEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELKDLKLFERRGNLHFIRFPTHDLPTFIQMGRDKNFSTLHTVLCATGGGAYKFEEDFRTIGNLQLHKLDELDCLVKGLLYIDSVSFNGQAECYYFENASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVSGTSLGGGTFLGLCSLLTGCESFEEALEMAAKGDSTNADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKDKRETVSKEDLARATLVTITNNIGSIARMCAVNEKISRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGLPNFR
SIO_010081: PANK3
subclass of: SO_0000673
so part of: PANK3
location: join(16618256..16618283,16671216..16671568,16697067..16697320,16706336..16706512,16709195..16709318,16734707..16734832,16745427..16745477)
location: region:16618256-16745477:1
so has part: feature:16618256-16618283:1:exon
so has part: feature:16671216-16671568:1:exon
so has part: feature:16697067-16697320:1:exon
so has part: feature:16706336-16706512:1:exon
so has part: feature:16709195-16709318:1:exon
so has part: feature:16734707-16734832:1:exon
so has part: feature:16745427-16745477:1:exon

XP_029439080.1
type: Protein
SIO_000068: ncbiprotein

position:16745477:1
position: 16745477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16618256-16618283:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16671216-16671568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16697067-16697320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16706336-16706512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16709195-16709318:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16734707-16734832:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16745427-16745477:1:exon

LOC115080078
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115080078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16919335..17168866
location: region:16919335-17168866:1
so has part: feature:16919335-17168866:1:exon
subclass of: SO_0000010

115080078
type: Gene
SIO_000068: ncbigene

position:16919335:1
position: 16919335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17168866:1
position: 17168866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16919335-17168866:1:exon

LOC115080078
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: LOC115080078
product: rho GTPase-activating protein 7-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029584110.1
SIO_010081: LOC115080078
subclass of: SO_0000673
so part of: LOC115080078
location: join(16919335..16919464,17134015..17134086,17134215..17134296,17136813..17136876,17137705..17139071,17139299..17139463,17140686..17140845,17142321..17142519,17145811..17146027,17151985..17152099,17160705..17160899,17165484..17165701,17166320..17166493,17167455..17168866)
location: region:16919335-17168866:1
so has part: feature:16919335-16919464:1:exon
so has part: feature:17134015-17134086:1:exon
so has part: feature:17134215-17134296:1:exon
so has part: feature:17136813-17136876:1:exon
so has part: feature:17137705-17139071:1:exon
so has part: feature:17139299-17139463:1:exon
so has part: feature:17140686-17140845:1:exon
so has part: feature:17142321-17142519:1:exon
so has part: feature:17145811-17146027:1:exon
so has part: feature:17151985-17152099:1:exon
so has part: feature:17160705-17160899:1:exon
so has part: feature:17165484-17165701:1:exon
so has part: feature:17166320-17166493:1:exon
so has part: feature:17167455-17168866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16919335-16919464:1:exon

position:16919464:1
position: 16919464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17134015-17134086:1:exon

position:17134015:1
position: 17134015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17134086:1
position: 17134086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17134215-17134296:1:exon

position:17134215:1
position: 17134215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17134296:1
position: 17134296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17136813-17136876:1:exon

position:17136813:1
position: 17136813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17136876:1
position: 17136876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17137705-17139071:1:exon

position:17137705:1
position: 17137705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17139071:1
position: 17139071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17139299-17139463:1:exon

position:17139299:1
position: 17139299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17139463:1
position: 17139463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:17140686-17140845:1:exon

position:17140686:1
position: 17140686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17140845:1
position: 17140845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:17142321-17142519:1:exon

position:17142321:1
position: 17142321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17142519:1
position: 17142519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:17145811-17146027:1:exon

position:17145811:1
position: 17145811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17146027:1
position: 17146027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:17151985-17152099:1:exon

position:17151985:1
position: 17151985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17152099:1
position: 17152099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:17160705-17160899:1:exon

position:17160705:1
position: 17160705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17160899:1
position: 17160899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:17165484-17165701:1:exon

position:17165484:1
position: 17165484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17165701:1
position: 17165701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:17166320-17166493:1:exon

position:17166320:1
position: 17166320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17166493:1
position: 17166493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:17167455-17168866:1:exon

position:17167455:1
position: 17167455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115080078
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: LOC115080078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 7-like isoform X1
translation: MAYQRNSRLKRSLSEHIKDSTNKAWDMFWKSARERRLSEIEAKEACDWLKAAGFPQYAQLYEDLQFPVDIETVKSDHEFLDQDAIESLYRRLNTLNKCAAMKVELSRHRKRSDESEEDEPCAISNRWEYQRHSKRWSRLESSEGFPEEEALCLSVPASPRLTVTGSEHVTFFNHGEKHDVLSLHSSSSSDSDSINFTKTLEDLETSRSFSRNSSNKLALPDCIVRCSSPNEILNNTEERLLEKPPNKGKSLLRKMEKLRLRNSSGKRSVHSKNKPIISGPTLLEGLDEDKLKNLNCVNICDLSDGQSKRSFAYSPQTCSSSSQSENSSTVSTPSPVIRVRRQSKRGGVYTEDFDPTKLFIWNDVYEQNEKNLHENLVFQIPQGHKPGTFPKALTNSILSPIDNTSVNWRTGSFHGCRRNERLSSKDSEVPPSPLSFIDNRLSIYDNVPGITGHLKIESPGDAGDDDDVFSELDNVMEHVNGLQKLVHQWTEKFSDGDSDFANDSTSPCPSSPKEIHLEREKHLEEKLGAVPGGDIDSSCNLVNKVDSSTLPYITVSEIESPLTRSSSISHWSNEQSPNLESLSLQIDNQFAGQLNRIQKMALLKLTALMDKYTPSSKQGWNWTIPKFIRKTKAPDYKDKNVFGVPFALNVQRTGHPVPKSILQAMEYLRAHFLDQVGLFRKSGVKSRIQALREMNELDASSVSYEGQSAFDVADMLKQYFRDLPEPIFTSKLCESFLHIYQYLPKDQEFYAVQAAILLLPDENREALKSLLFFLRDVVACVQENQMTPTNLAVCLAPSLFHLNTLRKESSSSSRSSQRKYSLGKPDQRDLSENLAATQGLAHMIAEGSRLFQLPDYCVDQYCGAFPCEAAPAAPMPHSATLIFLESSMQNLLRDSKDKFRSWTVCSGPGHVELAYKKVEDVHPVRLWKVSAEIEASPKVILQHILREQHAWDPNLVQAKVIKTLDEETEIYHYTTASLSPLPLREYVVLRTWRTDPQSGTCVLAATSVHDEGVMISGTLGHVLLCQHLLEATGPQKSRVTHVCRIDTRGRTTEWYNRVFGHMCAAEIARIKDAFTSPNTDQETNI
SIO_010081: LOC115080078
subclass of: SO_0000673
so part of: LOC115080078
location: join(16919350..16919464,17134015..17134086,17134215..17134296,17136813..17136876,17137705..17139071,17139299..17139463,17140686..17140845,17142321..17142519,17145811..17146027,17151985..17152099,17160705..17160899,17165484..17165701,17166320..17166493,17167455..17167569)
location: region:16919350-17167569:1
so has part: feature:16919350-16919464:1:exon
so has part: feature:17134015-17134086:1:exon
so has part: feature:17134215-17134296:1:exon
so has part: feature:17136813-17136876:1:exon
so has part: feature:17137705-17139071:1:exon
so has part: feature:17139299-17139463:1:exon
so has part: feature:17140686-17140845:1:exon
so has part: feature:17142321-17142519:1:exon
so has part: feature:17145811-17146027:1:exon
so has part: feature:17151985-17152099:1:exon
so has part: feature:17160705-17160899:1:exon
so has part: feature:17165484-17165701:1:exon
so has part: feature:17166320-17166493:1:exon
so has part: feature:17167455-17167569:1:exon

XP_029439970.1
type: Protein
SIO_000068: ncbiprotein

position:16919350:1
position: 16919350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17167569:1
position: 17167569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16919350-16919464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17134015-17134086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17134215-17134296:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17136813-17136876:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17137705-17139071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17139299-17139463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17140686-17140845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17142321-17142519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17145811-17146027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17151985-17152099:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17160705-17160899:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17165484-17165701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17166320-17166493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17167455-17167569:1:exon

LOC115080078
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: LOC115080078
product: rho GTPase-activating protein 7-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_029584113.1
SIO_010081: LOC115080078
subclass of: SO_0000673
so part of: LOC115080078
location: join(17112163..17112341,17134015..17134086,17134215..17134296,17136813..17136876,17137705..17139071,17139299..17139463,17140686..17140845,17142321..17142519,17145811..17146027,17151985..17152099,17160705..17160899,17165484..17165701,17166320..17166493,17167455..17168866)
location: region:17112163-17168866:1
so has part: feature:17112163-17112341:1:exon
so has part: feature:17134015-17134086:1:exon
so has part: feature:17134215-17134296:1:exon
so has part: feature:17136813-17136876:1:exon
so has part: feature:17137705-17139071:1:exon
so has part: feature:17139299-17139463:1:exon
so has part: feature:17140686-17140845:1:exon
so has part: feature:17142321-17142519:1:exon
so has part: feature:17145811-17146027:1:exon
so has part: feature:17151985-17152099:1:exon
so has part: feature:17160705-17160899:1:exon
so has part: feature:17165484-17165701:1:exon
so has part: feature:17166320-17166493:1:exon
so has part: feature:17167455-17168866:1:exon

position:17112163:1
position: 17112163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17112163-17112341:1:exon

position:17112341:1
position: 17112341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17134015-17134086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17134215-17134296:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17136813-17136876:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17137705-17139071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17139299-17139463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17140686-17140845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17142321-17142519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17145811-17146027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17151985-17152099:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17160705-17160899:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17165484-17165701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17166320-17166493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17167455-17168866:1:exon

LOC115080078
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: LOC115080078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 7-like isoform X3
translation: MIVTQIEAKEACDWLKAAGFPQYAQLYEDLQFPVDIETVKSDHEFLDQDAIESLYRRLNTLNKCAAMKVELSRHRKRSDESEEDEPCAISNRWEYQRHSKRWSRLESSEGFPEEEALCLSVPASPRLTVTGSEHVTFFNHGEKHDVLSLHSSSSSDSDSINFTKTLEDLETSRSFSRNSSNKLALPDCIVRCSSPNEILNNTEERLLEKPPNKGKSLLRKMEKLRLRNSSGKRSVHSKNKPIISGPTLLEGLDEDKLKNLNCVNICDLSDGQSKRSFAYSPQTCSSSSQSENSSTVSTPSPVIRVRRQSKRGGVYTEDFDPTKLFIWNDVYEQNEKNLHENLVFQIPQGHKPGTFPKALTNSILSPIDNTSVNWRTGSFHGCRRNERLSSKDSEVPPSPLSFIDNRLSIYDNVPGITGHLKIESPGDAGDDDDVFSELDNVMEHVNGLQKLVHQWTEKFSDGDSDFANDSTSPCPSSPKEIHLEREKHLEEKLGAVPGGDIDSSCNLVNKVDSSTLPYITVSEIESPLTRSSSISHWSNEQSPNLESLSLQIDNQFAGQLNRIQKMALLKLTALMDKYTPSSKQGWNWTIPKFIRKTKAPDYKDKNVFGVPFALNVQRTGHPVPKSILQAMEYLRAHFLDQVGLFRKSGVKSRIQALREMNELDASSVSYEGQSAFDVADMLKQYFRDLPEPIFTSKLCESFLHIYQYLPKDQEFYAVQAAILLLPDENREALKSLLFFLRDVVACVQENQMTPTNLAVCLAPSLFHLNTLRKESSSSSRSSQRKYSLGKPDQRDLSENLAATQGLAHMIAEGSRLFQLPDYCVDQYCGAFPCEAAPAAPMPHSATLIFLESSMQNLLRDSKDKFRSWTVCSGPGHVELAYKKVEDVHPVRLWKVSAEIEASPKVILQHILREQHAWDPNLVQAKVIKTLDEETEIYHYTTASLSPLPLREYVVLRTWRTDPQSGTCVLAATSVHDEGVMISGTLGHVLLCQHLLEATGPQKSRVTHVCRIDTRGRTTEWYNRVFGHMCAAEIARIKDAFTSPNTDQETNI
SIO_010081: LOC115080078
subclass of: SO_0000673
so part of: LOC115080078
location: join(17112329..17112341,17134015..17134086,17134215..17134296,17136813..17136876,17137705..17139071,17139299..17139463,17140686..17140845,17142321..17142519,17145811..17146027,17151985..17152099,17160705..17160899,17165484..17165701,17166320..17166493,17167455..17167569)
location: region:17112329-17167569:1
so has part: feature:17112329-17112341:1:exon
so has part: feature:17134015-17134086:1:exon
so has part: feature:17134215-17134296:1:exon
so has part: feature:17136813-17136876:1:exon
so has part: feature:17137705-17139071:1:exon
so has part: feature:17139299-17139463:1:exon
so has part: feature:17140686-17140845:1:exon
so has part: feature:17142321-17142519:1:exon
so has part: feature:17145811-17146027:1:exon
so has part: feature:17151985-17152099:1:exon
so has part: feature:17160705-17160899:1:exon
so has part: feature:17165484-17165701:1:exon
so has part: feature:17166320-17166493:1:exon
so has part: feature:17167455-17167569:1:exon

XP_029439973.1
type: Protein
SIO_000068: ncbiprotein

position:17112329:1
position: 17112329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17112329-17112341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17134015-17134086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17134215-17134296:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17136813-17136876:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17137705-17139071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17139299-17139463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17140686-17140845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17142321-17142519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17145811-17146027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17151985-17152099:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17160705-17160899:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17165484-17165701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17166320-17166493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17167455-17167569:1:exon

LOC115080078
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: LOC115080078
product: rho GTPase-activating protein 7-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_029584114.1
SIO_010081: LOC115080078
subclass of: SO_0000673
so part of: LOC115080078
location: join(17112391..17112522,17134015..17134086,17134215..17134296,17136813..17136876,17137705..17139071,17139299..17139463,17140686..17140845,17142321..17142519,17145811..17146027,17151985..17152099,17160705..17160899,17165484..17165701,17166320..17166493,17167455..17168866)
location: region:17112391-17168866:1
so has part: feature:17112391-17112522:1:exon
so has part: feature:17134015-17134086:1:exon
so has part: feature:17134215-17134296:1:exon
so has part: feature:17136813-17136876:1:exon
so has part: feature:17137705-17139071:1:exon
so has part: feature:17139299-17139463:1:exon
so has part: feature:17140686-17140845:1:exon
so has part: feature:17142321-17142519:1:exon
so has part: feature:17145811-17146027:1:exon
so has part: feature:17151985-17152099:1:exon
so has part: feature:17160705-17160899:1:exon
so has part: feature:17165484-17165701:1:exon
so has part: feature:17166320-17166493:1:exon
so has part: feature:17167455-17168866:1:exon

position:17112391:1
position: 17112391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17112391-17112522:1:exon

position:17112522:1
position: 17112522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17134015-17134086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17134215-17134296:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17136813-17136876:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17137705-17139071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17139299-17139463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17140686-17140845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17142321-17142519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17145811-17146027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17151985-17152099:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17160705-17160899:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17165484-17165701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17166320-17166493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17167455-17168866:1:exon

LOC115080078
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: LOC115080078
product: rho GTPase-activating protein 7-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_029584115.1
SIO_010081: LOC115080078
subclass of: SO_0000673
so part of: LOC115080078
location: join(17112432..17112562,17134015..17134086,17134215..17134296,17136813..17136876,17137705..17139071,17139299..17139463,17140686..17140845,17142321..17142519,17145811..17146027,17151985..17152099,17160705..17160899,17165484..17165701,17166320..17166493,17167455..17168866)
location: region:17112432-17168866:1
so has part: feature:17112432-17112562:1:exon
so has part: feature:17134015-17134086:1:exon
so has part: feature:17134215-17134296:1:exon
so has part: feature:17136813-17136876:1:exon
so has part: feature:17137705-17139071:1:exon
so has part: feature:17139299-17139463:1:exon
so has part: feature:17140686-17140845:1:exon
so has part: feature:17142321-17142519:1:exon
so has part: feature:17145811-17146027:1:exon
so has part: feature:17151985-17152099:1:exon
so has part: feature:17160705-17160899:1:exon
so has part: feature:17165484-17165701:1:exon
so has part: feature:17166320-17166493:1:exon
so has part: feature:17167455-17168866:1:exon

position:17112432:1
position: 17112432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17112432-17112562:1:exon

position:17112562:1
position: 17112562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17134015-17134086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17134215-17134296:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17136813-17136876:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17137705-17139071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17139299-17139463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17140686-17140845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17142321-17142519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17145811-17146027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17151985-17152099:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17160705-17160899:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17165484-17165701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17166320-17166493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17167455-17168866:1:exon

LOC115080078
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: LOC115080078
product: rho GTPase-activating protein 7-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029584112.1
SIO_010081: LOC115080078
subclass of: SO_0000673
so part of: LOC115080078
location: join(17128068..17128487,17134015..17134086,17134215..17134296,17136813..17136876,17137705..17139071,17139299..17139463,17140686..17140845,17142321..17142519,17145811..17146027,17151985..17152099,17160705..17160899,17165484..17165701,17166320..17166493,17167455..17168866)
location: region:17128068-17168866:1
so has part: feature:17128068-17128487:1:exon
so has part: feature:17134015-17134086:1:exon
so has part: feature:17134215-17134296:1:exon
so has part: feature:17136813-17136876:1:exon
so has part: feature:17137705-17139071:1:exon
so has part: feature:17139299-17139463:1:exon
so has part: feature:17140686-17140845:1:exon
so has part: feature:17142321-17142519:1:exon
so has part: feature:17145811-17146027:1:exon
so has part: feature:17151985-17152099:1:exon
so has part: feature:17160705-17160899:1:exon
so has part: feature:17165484-17165701:1:exon
so has part: feature:17166320-17166493:1:exon
so has part: feature:17167455-17168866:1:exon

position:17128068:1
position: 17128068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17128068-17128487:1:exon

position:17128487:1
position: 17128487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17134015-17134086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17134215-17134296:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17136813-17136876:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17137705-17139071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17139299-17139463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17140686-17140845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17142321-17142519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17145811-17146027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17151985-17152099:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17160705-17160899:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17165484-17165701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17166320-17166493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17167455-17168866:1:exon

LOC115080078
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: LOC115080078
product: rho GTPase-activating protein 7-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029584111.1
SIO_010081: LOC115080078
subclass of: SO_0000673
so part of: LOC115080078
location: join(17128068..17128254,17128373..17128487,17134015..17134086,17134215..17134296,17136813..17136876,17137705..17139071,17139299..17139463,17140686..17140845,17142321..17142519,17145811..17146027,17151985..17152099,17160705..17160899,17165484..17165701,17166320..17166493,17167455..17168866)
location: region:17128068-17168866:1
so has part: feature:17128068-17128254:1:exon
so has part: feature:17128373-17128487:1:exon
so has part: feature:17134015-17134086:1:exon
so has part: feature:17134215-17134296:1:exon
so has part: feature:17136813-17136876:1:exon
so has part: feature:17137705-17139071:1:exon
so has part: feature:17139299-17139463:1:exon
so has part: feature:17140686-17140845:1:exon
so has part: feature:17142321-17142519:1:exon
so has part: feature:17145811-17146027:1:exon
so has part: feature:17151985-17152099:1:exon
so has part: feature:17160705-17160899:1:exon
so has part: feature:17165484-17165701:1:exon
so has part: feature:17166320-17166493:1:exon
so has part: feature:17167455-17168866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17128068-17128254:1:exon

position:17128254:1
position: 17128254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17128373-17128487:1:exon

position:17128373:1
position: 17128373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17134015-17134086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17134215-17134296:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17136813-17136876:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17137705-17139071:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17139299-17139463:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17140686-17140845:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17142321-17142519:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17145811-17146027:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17151985-17152099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17160705-17160899:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17165484-17165701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17166320-17166493:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17167455-17168866:1:exon

LOC115080078
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: LOC115080078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 7-like isoform X2
translation: MSSIPGFPNILDNQLLEIEAKEACDWLKAAGFPQYAQLYEDLQFPVDIETVKSDHEFLDQDAIESLYRRLNTLNKCAAMKVELSRHRKRSDESEEDEPCAISNRWEYQRHSKRWSRLESSEGFPEEEALCLSVPASPRLTVTGSEHVTFFNHGEKHDVLSLHSSSSSDSDSINFTKTLEDLETSRSFSRNSSNKLALPDCIVRCSSPNEILNNTEERLLEKPPNKGKSLLRKMEKLRLRNSSGKRSVHSKNKPIISGPTLLEGLDEDKLKNLNCVNICDLSDGQSKRSFAYSPQTCSSSSQSENSSTVSTPSPVIRVRRQSKRGGVYTEDFDPTKLFIWNDVYEQNEKNLHENLVFQIPQGHKPGTFPKALTNSILSPIDNTSVNWRTGSFHGCRRNERLSSKDSEVPPSPLSFIDNRLSIYDNVPGITGHLKIESPGDAGDDDDVFSELDNVMEHVNGLQKLVHQWTEKFSDGDSDFANDSTSPCPSSPKEIHLEREKHLEEKLGAVPGGDIDSSCNLVNKVDSSTLPYITVSEIESPLTRSSSISHWSNEQSPNLESLSLQIDNQFAGQLNRIQKMALLKLTALMDKYTPSSKQGWNWTIPKFIRKTKAPDYKDKNVFGVPFALNVQRTGHPVPKSILQAMEYLRAHFLDQVGLFRKSGVKSRIQALREMNELDASSVSYEGQSAFDVADMLKQYFRDLPEPIFTSKLCESFLHIYQYLPKDQEFYAVQAAILLLPDENREALKSLLFFLRDVVACVQENQMTPTNLAVCLAPSLFHLNTLRKESSSSSRSSQRKYSLGKPDQRDLSENLAATQGLAHMIAEGSRLFQLPDYCVDQYCGAFPCEAAPAAPMPHSATLIFLESSMQNLLRDSKDKFRSWTVCSGPGHVELAYKKVEDVHPVRLWKVSAEIEASPKVILQHILREQHAWDPNLVQAKVIKTLDEETEIYHYTTASLSPLPLREYVVLRTWRTDPQSGTCVLAATSVHDEGVMISGTLGHVLLCQHLLEATGPQKSRVTHVCRIDTRGRTTEWYNRVFGHMCAAEIARIKDAFTSPNTDQETNI
SIO_010081: LOC115080078
subclass of: SO_0000673
so part of: LOC115080078
location: join(17128439..17128487,17134015..17134086,17134215..17134296,17136813..17136876,17137705..17139071,17139299..17139463,17140686..17140845,17142321..17142519,17145811..17146027,17151985..17152099,17160705..17160899,17165484..17165701,17166320..17166493,17167455..17167569)
location: region:17128439-17167569:1
so has part: feature:17128439-17128487:1:exon
so has part: feature:17134015-17134086:1:exon
so has part: feature:17134215-17134296:1:exon
so has part: feature:17136813-17136876:1:exon
so has part: feature:17137705-17139071:1:exon
so has part: feature:17139299-17139463:1:exon
so has part: feature:17140686-17140845:1:exon
so has part: feature:17142321-17142519:1:exon
so has part: feature:17145811-17146027:1:exon
so has part: feature:17151985-17152099:1:exon
so has part: feature:17160705-17160899:1:exon
so has part: feature:17165484-17165701:1:exon
so has part: feature:17166320-17166493:1:exon
so has part: feature:17167455-17167569:1:exon

XP_029439971.1
type: Protein
SIO_000068: ncbiprotein

position:17128439:1
position: 17128439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17128439-17128487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17134015-17134086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17134215-17134296:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17136813-17136876:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17137705-17139071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17139299-17139463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17140686-17140845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17142321-17142519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17145811-17146027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17151985-17152099:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17160705-17160899:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17165484-17165701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17166320-17166493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17167455-17167569:1:exon

LOC115080078
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: LOC115080078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 7-like isoform X2
translation: MSSIPGFPNILDNQLLEIEAKEACDWLKAAGFPQYAQLYEDLQFPVDIETVKSDHEFLDQDAIESLYRRLNTLNKCAAMKVELSRHRKRSDESEEDEPCAISNRWEYQRHSKRWSRLESSEGFPEEEALCLSVPASPRLTVTGSEHVTFFNHGEKHDVLSLHSSSSSDSDSINFTKTLEDLETSRSFSRNSSNKLALPDCIVRCSSPNEILNNTEERLLEKPPNKGKSLLRKMEKLRLRNSSGKRSVHSKNKPIISGPTLLEGLDEDKLKNLNCVNICDLSDGQSKRSFAYSPQTCSSSSQSENSSTVSTPSPVIRVRRQSKRGGVYTEDFDPTKLFIWNDVYEQNEKNLHENLVFQIPQGHKPGTFPKALTNSILSPIDNTSVNWRTGSFHGCRRNERLSSKDSEVPPSPLSFIDNRLSIYDNVPGITGHLKIESPGDAGDDDDVFSELDNVMEHVNGLQKLVHQWTEKFSDGDSDFANDSTSPCPSSPKEIHLEREKHLEEKLGAVPGGDIDSSCNLVNKVDSSTLPYITVSEIESPLTRSSSISHWSNEQSPNLESLSLQIDNQFAGQLNRIQKMALLKLTALMDKYTPSSKQGWNWTIPKFIRKTKAPDYKDKNVFGVPFALNVQRTGHPVPKSILQAMEYLRAHFLDQVGLFRKSGVKSRIQALREMNELDASSVSYEGQSAFDVADMLKQYFRDLPEPIFTSKLCESFLHIYQYLPKDQEFYAVQAAILLLPDENREALKSLLFFLRDVVACVQENQMTPTNLAVCLAPSLFHLNTLRKESSSSSRSSQRKYSLGKPDQRDLSENLAATQGLAHMIAEGSRLFQLPDYCVDQYCGAFPCEAAPAAPMPHSATLIFLESSMQNLLRDSKDKFRSWTVCSGPGHVELAYKKVEDVHPVRLWKVSAEIEASPKVILQHILREQHAWDPNLVQAKVIKTLDEETEIYHYTTASLSPLPLREYVVLRTWRTDPQSGTCVLAATSVHDEGVMISGTLGHVLLCQHLLEATGPQKSRVTHVCRIDTRGRTTEWYNRVFGHMCAAEIARIKDAFTSPNTDQETNI
SIO_010081: LOC115080078
subclass of: SO_0000673
so part of: LOC115080078
location: join(17128439..17128487,17134015..17134086,17134215..17134296,17136813..17136876,17137705..17139071,17139299..17139463,17140686..17140845,17142321..17142519,17145811..17146027,17151985..17152099,17160705..17160899,17165484..17165701,17166320..17166493,17167455..17167569)
location: region:17128439-17167569:1
so has part: feature:17128439-17128487:1:exon
so has part: feature:17134015-17134086:1:exon
so has part: feature:17134215-17134296:1:exon
so has part: feature:17136813-17136876:1:exon
so has part: feature:17137705-17139071:1:exon
so has part: feature:17139299-17139463:1:exon
so has part: feature:17140686-17140845:1:exon
so has part: feature:17142321-17142519:1:exon
so has part: feature:17145811-17146027:1:exon
so has part: feature:17151985-17152099:1:exon
so has part: feature:17160705-17160899:1:exon
so has part: feature:17165484-17165701:1:exon
so has part: feature:17166320-17166493:1:exon
so has part: feature:17167455-17167569:1:exon

XP_029439972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17128439-17128487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17134015-17134086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17134215-17134296:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17136813-17136876:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17137705-17139071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17139299-17139463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17140686-17140845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17142321-17142519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17145811-17146027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17151985-17152099:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17160705-17160899:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17165484-17165701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17166320-17166493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17167455-17167569:1:exon

LOC115080078
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: LOC115080078
product: rho GTPase-activating protein 7-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029584116.1
SIO_010081: LOC115080078
subclass of: SO_0000673
so part of: LOC115080078
location: join(17129392..17130339,17134015..17134086,17134215..17134296,17136813..17136876,17137705..17139071,17139299..17139463,17140686..17140845,17142321..17142519,17145811..17146027,17151985..17152099,17160705..17160899,17165484..17165701,17166320..17166493,17167455..17168866)
location: region:17129392-17168866:1
so has part: feature:17129392-17130339:1:exon
so has part: feature:17134015-17134086:1:exon
so has part: feature:17134215-17134296:1:exon
so has part: feature:17136813-17136876:1:exon
so has part: feature:17137705-17139071:1:exon
so has part: feature:17139299-17139463:1:exon
so has part: feature:17140686-17140845:1:exon
so has part: feature:17142321-17142519:1:exon
so has part: feature:17145811-17146027:1:exon
so has part: feature:17151985-17152099:1:exon
so has part: feature:17160705-17160899:1:exon
so has part: feature:17165484-17165701:1:exon
so has part: feature:17166320-17166493:1:exon
so has part: feature:17167455-17168866:1:exon

position:17129392:1
position: 17129392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17129392-17130339:1:exon

position:17130339:1
position: 17130339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17134015-17134086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17134215-17134296:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17136813-17136876:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17137705-17139071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17139299-17139463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17140686-17140845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17142321-17142519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17145811-17146027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17151985-17152099:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17160705-17160899:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17165484-17165701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17166320-17166493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17167455-17168866:1:exon

LOC115080078
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: LOC115080078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 7-like isoform X4
translation: MKVELSRHRKRSDESEEDEPCAISNRWEYQRHSKRWSRLESSEGFPEEEALCLSVPASPRLTVTGSEHVTFFNHGEKHDVLSLHSSSSSDSDSINFTKTLEDLETSRSFSRNSSNKLALPDCIVRCSSPNEILNNTEERLLEKPPNKGKSLLRKMEKLRLRNSSGKRSVHSKNKPIISGPTLLEGLDEDKLKNLNCVNICDLSDGQSKRSFAYSPQTCSSSSQSENSSTVSTPSPVIRVRRQSKRGGVYTEDFDPTKLFIWNDVYEQNEKNLHENLVFQIPQGHKPGTFPKALTNSILSPIDNTSVNWRTGSFHGCRRNERLSSKDSEVPPSPLSFIDNRLSIYDNVPGITGHLKIESPGDAGDDDDVFSELDNVMEHVNGLQKLVHQWTEKFSDGDSDFANDSTSPCPSSPKEIHLEREKHLEEKLGAVPGGDIDSSCNLVNKVDSSTLPYITVSEIESPLTRSSSISHWSNEQSPNLESLSLQIDNQFAGQLNRIQKMALLKLTALMDKYTPSSKQGWNWTIPKFIRKTKAPDYKDKNVFGVPFALNVQRTGHPVPKSILQAMEYLRAHFLDQVGLFRKSGVKSRIQALREMNELDASSVSYEGQSAFDVADMLKQYFRDLPEPIFTSKLCESFLHIYQYLPKDQEFYAVQAAILLLPDENREALKSLLFFLRDVVACVQENQMTPTNLAVCLAPSLFHLNTLRKESSSSSRSSQRKYSLGKPDQRDLSENLAATQGLAHMIAEGSRLFQLPDYCVDQYCGAFPCEAAPAAPMPHSATLIFLESSMQNLLRDSKDKFRSWTVCSGPGHVELAYKKVEDVHPVRLWKVSAEIEASPKVILQHILREQHAWDPNLVQAKVIKTLDEETEIYHYTTASLSPLPLREYVVLRTWRTDPQSGTCVLAATSVHDEGVMISGTLGHVLLCQHLLEATGPQKSRVTHVCRIDTRGRTTEWYNRVFGHMCAAEIARIKDAFTSPNTDQETNI
SIO_010081: LOC115080078
subclass of: SO_0000673
so part of: LOC115080078
location: join(17136844..17136876,17137705..17139071,17139299..17139463,17140686..17140845,17142321..17142519,17145811..17146027,17151985..17152099,17160705..17160899,17165484..17165701,17166320..17166493,17167455..17167569)
location: region:17136844-17167569:1
so has part: feature:17136844-17136876:1:exon
so has part: feature:17137705-17139071:1:exon
so has part: feature:17139299-17139463:1:exon
so has part: feature:17140686-17140845:1:exon
so has part: feature:17142321-17142519:1:exon
so has part: feature:17145811-17146027:1:exon
so has part: feature:17151985-17152099:1:exon
so has part: feature:17160705-17160899:1:exon
so has part: feature:17165484-17165701:1:exon
so has part: feature:17166320-17166493:1:exon
so has part: feature:17167455-17167569:1:exon

XP_029439974.1
type: Protein
SIO_000068: ncbiprotein

position:17136844:1
position: 17136844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17136844-17136876:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17137705-17139071:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17139299-17139463:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17140686-17140845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17142321-17142519:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17145811-17146027:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17151985-17152099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17160705-17160899:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17165484-17165701:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17166320-17166493:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17167455-17167569:1:exon

LOC115080078
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: LOC115080078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 7-like isoform X4
translation: MKVELSRHRKRSDESEEDEPCAISNRWEYQRHSKRWSRLESSEGFPEEEALCLSVPASPRLTVTGSEHVTFFNHGEKHDVLSLHSSSSSDSDSINFTKTLEDLETSRSFSRNSSNKLALPDCIVRCSSPNEILNNTEERLLEKPPNKGKSLLRKMEKLRLRNSSGKRSVHSKNKPIISGPTLLEGLDEDKLKNLNCVNICDLSDGQSKRSFAYSPQTCSSSSQSENSSTVSTPSPVIRVRRQSKRGGVYTEDFDPTKLFIWNDVYEQNEKNLHENLVFQIPQGHKPGTFPKALTNSILSPIDNTSVNWRTGSFHGCRRNERLSSKDSEVPPSPLSFIDNRLSIYDNVPGITGHLKIESPGDAGDDDDVFSELDNVMEHVNGLQKLVHQWTEKFSDGDSDFANDSTSPCPSSPKEIHLEREKHLEEKLGAVPGGDIDSSCNLVNKVDSSTLPYITVSEIESPLTRSSSISHWSNEQSPNLESLSLQIDNQFAGQLNRIQKMALLKLTALMDKYTPSSKQGWNWTIPKFIRKTKAPDYKDKNVFGVPFALNVQRTGHPVPKSILQAMEYLRAHFLDQVGLFRKSGVKSRIQALREMNELDASSVSYEGQSAFDVADMLKQYFRDLPEPIFTSKLCESFLHIYQYLPKDQEFYAVQAAILLLPDENREALKSLLFFLRDVVACVQENQMTPTNLAVCLAPSLFHLNTLRKESSSSSRSSQRKYSLGKPDQRDLSENLAATQGLAHMIAEGSRLFQLPDYCVDQYCGAFPCEAAPAAPMPHSATLIFLESSMQNLLRDSKDKFRSWTVCSGPGHVELAYKKVEDVHPVRLWKVSAEIEASPKVILQHILREQHAWDPNLVQAKVIKTLDEETEIYHYTTASLSPLPLREYVVLRTWRTDPQSGTCVLAATSVHDEGVMISGTLGHVLLCQHLLEATGPQKSRVTHVCRIDTRGRTTEWYNRVFGHMCAAEIARIKDAFTSPNTDQETNI
SIO_010081: LOC115080078
subclass of: SO_0000673
so part of: LOC115080078
location: join(17136844..17136876,17137705..17139071,17139299..17139463,17140686..17140845,17142321..17142519,17145811..17146027,17151985..17152099,17160705..17160899,17165484..17165701,17166320..17166493,17167455..17167569)
location: region:17136844-17167569:1
so has part: feature:17136844-17136876:1:exon
so has part: feature:17137705-17139071:1:exon
so has part: feature:17139299-17139463:1:exon
so has part: feature:17140686-17140845:1:exon
so has part: feature:17142321-17142519:1:exon
so has part: feature:17145811-17146027:1:exon
so has part: feature:17151985-17152099:1:exon
so has part: feature:17160705-17160899:1:exon
so has part: feature:17165484-17165701:1:exon
so has part: feature:17166320-17166493:1:exon
so has part: feature:17167455-17167569:1:exon

XP_029439975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17136844-17136876:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17137705-17139071:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17139299-17139463:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17140686-17140845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17142321-17142519:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17145811-17146027:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17151985-17152099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17160705-17160899:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17165484-17165701:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17166320-17166493:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17167455-17167569:1:exon

LOC115080078
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: LOC115080078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 7-like isoform X4
translation: MKVELSRHRKRSDESEEDEPCAISNRWEYQRHSKRWSRLESSEGFPEEEALCLSVPASPRLTVTGSEHVTFFNHGEKHDVLSLHSSSSSDSDSINFTKTLEDLETSRSFSRNSSNKLALPDCIVRCSSPNEILNNTEERLLEKPPNKGKSLLRKMEKLRLRNSSGKRSVHSKNKPIISGPTLLEGLDEDKLKNLNCVNICDLSDGQSKRSFAYSPQTCSSSSQSENSSTVSTPSPVIRVRRQSKRGGVYTEDFDPTKLFIWNDVYEQNEKNLHENLVFQIPQGHKPGTFPKALTNSILSPIDNTSVNWRTGSFHGCRRNERLSSKDSEVPPSPLSFIDNRLSIYDNVPGITGHLKIESPGDAGDDDDVFSELDNVMEHVNGLQKLVHQWTEKFSDGDSDFANDSTSPCPSSPKEIHLEREKHLEEKLGAVPGGDIDSSCNLVNKVDSSTLPYITVSEIESPLTRSSSISHWSNEQSPNLESLSLQIDNQFAGQLNRIQKMALLKLTALMDKYTPSSKQGWNWTIPKFIRKTKAPDYKDKNVFGVPFALNVQRTGHPVPKSILQAMEYLRAHFLDQVGLFRKSGVKSRIQALREMNELDASSVSYEGQSAFDVADMLKQYFRDLPEPIFTSKLCESFLHIYQYLPKDQEFYAVQAAILLLPDENREALKSLLFFLRDVVACVQENQMTPTNLAVCLAPSLFHLNTLRKESSSSSRSSQRKYSLGKPDQRDLSENLAATQGLAHMIAEGSRLFQLPDYCVDQYCGAFPCEAAPAAPMPHSATLIFLESSMQNLLRDSKDKFRSWTVCSGPGHVELAYKKVEDVHPVRLWKVSAEIEASPKVILQHILREQHAWDPNLVQAKVIKTLDEETEIYHYTTASLSPLPLREYVVLRTWRTDPQSGTCVLAATSVHDEGVMISGTLGHVLLCQHLLEATGPQKSRVTHVCRIDTRGRTTEWYNRVFGHMCAAEIARIKDAFTSPNTDQETNI
SIO_010081: LOC115080078
subclass of: SO_0000673
so part of: LOC115080078
location: join(17136844..17136876,17137705..17139071,17139299..17139463,17140686..17140845,17142321..17142519,17145811..17146027,17151985..17152099,17160705..17160899,17165484..17165701,17166320..17166493,17167455..17167569)
location: region:17136844-17167569:1
so has part: feature:17136844-17136876:1:exon
so has part: feature:17137705-17139071:1:exon
so has part: feature:17139299-17139463:1:exon
so has part: feature:17140686-17140845:1:exon
so has part: feature:17142321-17142519:1:exon
so has part: feature:17145811-17146027:1:exon
so has part: feature:17151985-17152099:1:exon
so has part: feature:17160705-17160899:1:exon
so has part: feature:17165484-17165701:1:exon
so has part: feature:17166320-17166493:1:exon
so has part: feature:17167455-17167569:1:exon

XP_029439976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17136844-17136876:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17137705-17139071:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17139299-17139463:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17140686-17140845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17142321-17142519:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17145811-17146027:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17151985-17152099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17160705-17160899:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17165484-17165701:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17166320-17166493:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17167455-17167569:1:exon

RARS
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: RARS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17177551..17290708)
location: region:17177551-17290708:-1
so has part: feature:17177551-17290708:-1:exon
subclass of: SO_0000010

115079835
type: Gene
SIO_000068: ncbigene

position:17177551:-1
position: 17177551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17290708:-1
position: 17290708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17177551-17290708:-1:exon

RARS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: RARS
product: arginyl-tRNA synthetase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_029583732.1
SIO_010081: RARS
subclass of: SO_0000673
so part of: RARS
location: complement(join(17177551..17177734,17181192..17181439,17182708..17182880,17195256..17195361,17198545..17198654,17203964..17204142,17209959..17210063,17215914..17216043,17216762..17216882,17223270..17223391,17232479..17232579,17235147..17235255,17237009..17237197,17244359..17244493,17290542..17290708))
location: region:17177551-17290708:-1
so has part: feature:17290542-17290708:-1:exon
so has part: feature:17244359-17244493:-1:exon
so has part: feature:17237009-17237197:-1:exon
so has part: feature:17235147-17235255:-1:exon
so has part: feature:17232479-17232579:-1:exon
so has part: feature:17223270-17223391:-1:exon
so has part: feature:17216762-17216882:-1:exon
so has part: feature:17215914-17216043:-1:exon
so has part: feature:17209959-17210063:-1:exon
so has part: feature:17203964-17204142:-1:exon
so has part: feature:17198545-17198654:-1:exon
so has part: feature:17195256-17195361:-1:exon
so has part: feature:17182708-17182880:-1:exon
so has part: feature:17181192-17181439:-1:exon
so has part: feature:17177551-17177734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17290542-17290708:-1:exon

position:17290542:-1
position: 17290542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17244359-17244493:-1:exon

position:17244359:-1
position: 17244359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17244493:-1
position: 17244493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17237009-17237197:-1:exon

position:17237009:-1
position: 17237009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17237197:-1
position: 17237197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17235147-17235255:-1:exon

position:17235147:-1
position: 17235147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17235255:-1
position: 17235255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17232479-17232579:-1:exon

position:17232479:-1
position: 17232479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17232579:-1
position: 17232579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17223270-17223391:-1:exon

position:17223270:-1
position: 17223270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17223391:-1
position: 17223391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:17216762-17216882:-1:exon

position:17216762:-1
position: 17216762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17216882:-1
position: 17216882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:17215914-17216043:-1:exon

position:17215914:-1
position: 17215914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17216043:-1
position: 17216043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:17209959-17210063:-1:exon

position:17209959:-1
position: 17209959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17210063:-1
position: 17210063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:17203964-17204142:-1:exon

position:17203964:-1
position: 17203964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17204142:-1
position: 17204142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:17198545-17198654:-1:exon

position:17198545:-1
position: 17198545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17198654:-1
position: 17198654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:17195256-17195361:-1:exon

position:17195256:-1
position: 17195256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17195361:-1
position: 17195361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:17182708-17182880:-1:exon

position:17182708:-1
position: 17182708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17182880:-1
position: 17182880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:17181192-17181439:-1:exon

position:17181192:-1
position: 17181192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17181439:-1
position: 17181439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:17177551-17177734:-1:exon

position:17177734:-1
position: 17177734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RARS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: RARS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine--tRNA ligase, cytoplasmic
translation: MLWPWPVPRVALRRPKCPSDLSRFLSSPGSARSEPAAERRMEASVADYQARMAQQEKEIKFLAAEINGLKQVGSLDGFPSIEGLREENAKLKYRLNILHKSLQEERKKPTKAMININRSLHEIFGDAVRVAFPELENPPLAVTLSQQPKFGDYQCNSAMSIAQILKAQNNKVNPREIADKIARNIPDNDYIEKVDIAGPGFINISLKKDFVAKQLSRLLVNGVQPPAVGKQKKVIVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEFVGHNVLRLNHVGDWGTQFGMLIAHLQDKFPDYVTVSPPISDLQAFYKESKHRFDTEEEFKKRAYQCVVQLQSHNPDIKRAWNLICDVSRKEFQRIYDCLDIKLIERGESFYQERMTDVVKLFEEKGLVQDDEGRKIVFPPECSIPLTVVKSDGGYTYDTSDLAALHQRLFDENGDIVIYVVDSGQSMHFQTVFAAGQMIGWYDPAVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRSMDKLKDKERDKVLTPEELKAAQVSVAFGCVKYADLSHNRLNDYIFSFDKMLDDKGNTAAYLLYAFTRIRSIARLANIDDGMLQKAAQETEILLDHEKEWKLGKCILKFPEILQKILDDLLLHTLCDYLYELATTFTEFYDNCYCVEKDRQTGKIVKVNMWRMLLCDATAAVMAKGFDILGIKPVQKM
SIO_010081: RARS
subclass of: SO_0000673
so part of: RARS
location: complement(join(17177625..17177734,17181192..17181439,17182708..17182880,17195256..17195361,17198545..17198654,17203964..17204142,17209959..17210063,17215914..17216043,17216762..17216882,17223270..17223391,17232479..17232579,17235147..17235255,17237009..17237197,17244359..17244493,17290542..17290706))
location: region:17177625-17290706:-1
so has part: feature:17290542-17290706:-1:exon
so has part: feature:17244359-17244493:-1:exon
so has part: feature:17237009-17237197:-1:exon
so has part: feature:17235147-17235255:-1:exon
so has part: feature:17232479-17232579:-1:exon
so has part: feature:17223270-17223391:-1:exon
so has part: feature:17216762-17216882:-1:exon
so has part: feature:17215914-17216043:-1:exon
so has part: feature:17209959-17210063:-1:exon
so has part: feature:17203964-17204142:-1:exon
so has part: feature:17198545-17198654:-1:exon
so has part: feature:17195256-17195361:-1:exon
so has part: feature:17182708-17182880:-1:exon
so has part: feature:17181192-17181439:-1:exon
so has part: feature:17177625-17177734:-1:exon

XP_029439592.1
type: Protein
SIO_000068: ncbiprotein

position:17177625:-1
position: 17177625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17290706:-1
position: 17290706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17290542-17290706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17244359-17244493:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17237009-17237197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17235147-17235255:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17232479-17232579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17223270-17223391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17216762-17216882:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17215914-17216043:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17209959-17210063:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17203964-17204142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17198545-17198654:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17195256-17195361:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17182708-17182880:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17181192-17181439:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17177625-17177734:-1:exon

WWC1
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: WWC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17308032..17605559)
location: region:17308032-17605559:-1
so has part: feature:17308032-17605559:-1:exon
subclass of: SO_0000010

115079885
type: Gene
SIO_000068: ncbigene

position:17308032:-1
position: 17308032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17605559:-1
position: 17605559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17308032-17605559:-1:exon

WWC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: WWC1
product: WW and C2 domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_029583831.1
SIO_010081: WWC1
subclass of: SO_0000673
so part of: WWC1
location: complement(join(17308032..17308193,17314349..17314470,17318102..17318335,17320741..17320833,17326906..17327070,17332795..17332912,17334197..17334297,17334762..17334914,17349683..17349875,17351905..17351991,17358637..17358717,17362027..17362135,17369259..17369791,17376624..17376713,17389029..17389271,17411302..17411375,17420712..17420843,17422092..17422221,17435177..17435256,17436538..17436614,17438050..17438253,17453600..17453709,17605277..17605559))
location: region:17308032-17605559:-1
so has part: feature:17605277-17605559:-1:exon
so has part: feature:17453600-17453709:-1:exon
so has part: feature:17438050-17438253:-1:exon
so has part: feature:17436538-17436614:-1:exon
so has part: feature:17435177-17435256:-1:exon
so has part: feature:17422092-17422221:-1:exon
so has part: feature:17420712-17420843:-1:exon
so has part: feature:17411302-17411375:-1:exon
so has part: feature:17389029-17389271:-1:exon
so has part: feature:17376624-17376713:-1:exon
so has part: feature:17369259-17369791:-1:exon
so has part: feature:17362027-17362135:-1:exon
so has part: feature:17358637-17358717:-1:exon
so has part: feature:17351905-17351991:-1:exon
so has part: feature:17349683-17349875:-1:exon
so has part: feature:17334762-17334914:-1:exon
so has part: feature:17334197-17334297:-1:exon
so has part: feature:17332795-17332912:-1:exon
so has part: feature:17326906-17327070:-1:exon
so has part: feature:17320741-17320833:-1:exon
so has part: feature:17318102-17318335:-1:exon
so has part: feature:17314349-17314470:-1:exon
so has part: feature:17308032-17308193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17605277-17605559:-1:exon

position:17605277:-1
position: 17605277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17453600-17453709:-1:exon

position:17453600:-1
position: 17453600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17453709:-1
position: 17453709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17438050-17438253:-1:exon

position:17438050:-1
position: 17438050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17438253:-1
position: 17438253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17436538-17436614:-1:exon

position:17436538:-1
position: 17436538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17436614:-1
position: 17436614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17435177-17435256:-1:exon

position:17435177:-1
position: 17435177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17435256:-1
position: 17435256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17422092-17422221:-1:exon

position:17422092:-1
position: 17422092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17422221:-1
position: 17422221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:17420712-17420843:-1:exon

position:17420712:-1
position: 17420712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17420843:-1
position: 17420843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:17411302-17411375:-1:exon

position:17411302:-1
position: 17411302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17411375:-1
position: 17411375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:17389029-17389271:-1:exon

position:17389029:-1
position: 17389029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17389271:-1
position: 17389271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:17376624-17376713:-1:exon

position:17376624:-1
position: 17376624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17376713:-1
position: 17376713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:17369259-17369791:-1:exon

position:17369259:-1
position: 17369259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17369791:-1
position: 17369791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:17362027-17362135:-1:exon

position:17362027:-1
position: 17362027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17362135:-1
position: 17362135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:17358637-17358717:-1:exon

position:17358637:-1
position: 17358637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17358717:-1
position: 17358717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:17351905-17351991:-1:exon

position:17351905:-1
position: 17351905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17351991:-1
position: 17351991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:17349683-17349875:-1:exon

position:17349683:-1
position: 17349683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17349875:-1
position: 17349875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:17334762-17334914:-1:exon

position:17334762:-1
position: 17334762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17334914:-1
position: 17334914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:17334197-17334297:-1:exon

position:17334197:-1
position: 17334197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17334297:-1
position: 17334297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:17332795-17332912:-1:exon

position:17332795:-1
position: 17332795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17332912:-1
position: 17332912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:17326906-17327070:-1:exon

position:17326906:-1
position: 17326906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17327070:-1
position: 17327070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:17320741-17320833:-1:exon

position:17320741:-1
position: 17320741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17320833:-1
position: 17320833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:17318102-17318335:-1:exon

position:17318102:-1
position: 17318102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17318335:-1
position: 17318335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:17314349-17314470:-1:exon

position:17314349:-1
position: 17314349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17314470:-1
position: 17314470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:17308032-17308193:-1:exon

position:17308193:-1
position: 17308193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WWC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: WWC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein KIBRA
translation: MPRKELPLPEGWEKAWDFDGKAYYIDHTSKTTSWIDPRDRITKPLTFADCIGDELPLGWEEAHDKQAGTYYIDHNNQSTQIEDPRVLWRQEQERMLKDYLVLAQEALLAQKEIFQVKQQRLELAQQEYRQLHDVWKHKLGSQTSLVSGSSSSSKYDPDILKAEIATTKSRVNKLKREVLYMRQELHYKENGFQTLKQIDLKMSSAQGGYKLDEAQAILSEMKAIKKAISSGEKEKQALIQSLARLKDGFLSDKGSQSDLWASNISFENSRQYLDVSSQTDLTENFVTSSNNQLAEKVRLRLRYEEAKRRIAKIKIQLAKLDSEAWPGVLDSERDRLILISEKEELLKEMRFISPRKWTQSEVERLEVERKRLEEDLRTARDSQSKALTERLKLNSKRTQLVRELEEATRSLATLHSQLKSLSASMLSLSSGSSPGSLTSSRGSLATSSQDSSTSASFTDLYYEQLEQLDLEYQNKMDFLLQEGAIGFRPSGCITTIHENEVAKLQRTDTTNRIQLLRSLSGTPKSMTSLSPRSSLSSPSPPCSPLVIDPLLAGDAFLSHMDSDDSDLSLSLCELRLNAVTEGCRLEGTEAEDKALGQGLNSLRGAALKVSCVSAAVSDESVAGDSGVYEASMQRSRISGNAALEGDEPDAAGTAKIQIGMKYDDKNGQFAVFVIQLSNSSVLLLQQDQKVYIRVAVLPCSESTSCLFRTRSVETMDNLVYNEIFWVPISHAALRQKTLRVDICTVNSSHHEECLGGAQISLAEVCRSAESTTRWYNLLSYRYLPNETMKKRQRNSRLEVSDQENMDSVSALLEQTAVELEAVEKRREESRSTLCAEENWPDEEDVVEEEEEEGCEDEGGNYIEEEDMAVQVPTETALKVDKETNTESPAQPSTIVRPKDKRPANPLQTPFIRGSPIIRSKTFSPGPQSHYICRLNRSDSDSSTLSKKPPFVRNAMERQSVRVKRPSSAKPFGTERLLRTSLDLELDLQATRTWHSQLIQEISVLKELKEQLEQAKRQGESELPRSMKGDDRLKLMLQQVEKQVEKTEQRCELRVDKMMRTAAKDVHRLRGQSRKEPLEVQSFREKMAFFTRPRINIPTLSADDV
SIO_010081: WWC1
subclass of: SO_0000673
so part of: WWC1
location: complement(join(17308127..17308193,17314349..17314470,17318102..17318335,17320741..17320833,17326906..17327070,17332795..17332912,17334197..17334297,17334762..17334914,17349683..17349875,17351905..17351991,17358637..17358717,17362027..17362135,17369259..17369791,17376624..17376713,17389029..17389271,17411302..17411375,17420712..17420843,17422092..17422221,17435177..17435256,17436538..17436614,17438050..17438253,17453600..17453709,17605277..17605395))
location: region:17308127-17605395:-1
so has part: feature:17605277-17605395:-1:exon
so has part: feature:17453600-17453709:-1:exon
so has part: feature:17438050-17438253:-1:exon
so has part: feature:17436538-17436614:-1:exon
so has part: feature:17435177-17435256:-1:exon
so has part: feature:17422092-17422221:-1:exon
so has part: feature:17420712-17420843:-1:exon
so has part: feature:17411302-17411375:-1:exon
so has part: feature:17389029-17389271:-1:exon
so has part: feature:17376624-17376713:-1:exon
so has part: feature:17369259-17369791:-1:exon
so has part: feature:17362027-17362135:-1:exon
so has part: feature:17358637-17358717:-1:exon
so has part: feature:17351905-17351991:-1:exon
so has part: feature:17349683-17349875:-1:exon
so has part: feature:17334762-17334914:-1:exon
so has part: feature:17334197-17334297:-1:exon
so has part: feature:17332795-17332912:-1:exon
so has part: feature:17326906-17327070:-1:exon
so has part: feature:17320741-17320833:-1:exon
so has part: feature:17318102-17318335:-1:exon
so has part: feature:17314349-17314470:-1:exon
so has part: feature:17308127-17308193:-1:exon

XP_029439691.1
type: Protein
SIO_000068: ncbiprotein

position:17308127:-1
position: 17308127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17605395:-1
position: 17605395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17605277-17605395:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17453600-17453709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17438050-17438253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17436538-17436614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17435177-17435256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17422092-17422221:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17420712-17420843:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17411302-17411375:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17389029-17389271:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17376624-17376713:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17369259-17369791:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17362027-17362135:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17358637-17358717:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17351905-17351991:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17349683-17349875:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:17334762-17334914:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:17334197-17334297:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:17332795-17332912:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:17326906-17327070:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:17320741-17320833:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:17318102-17318335:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:17314349-17314470:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:17308127-17308193:-1:exon

LOC115079887
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115079887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 17605463..17618479
location: region:17605463-17618479:1
so has part: feature:17605463-17618479:1:exon
subclass of: SO_0000011

115079887
type: Gene
SIO_000068: ncbigene

position:17605463:1
position: 17605463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17618479:1
position: 17618479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17605463-17618479:1:exon

LOC115079887
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115079887
product: uncharacterized LOC115079887
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003853431.1
SIO_010081: LOC115079887
subclass of: SO_0000673
so part of: LOC115079887
location: join(17605463..17605600,17615589..17615669,17617311..17618479)
location: region:17605463-17618479:1
so has part: feature:17605463-17605600:1:exon
so has part: feature:17615589-17615669:1:exon
so has part: feature:17617311-17618479:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17605463-17605600:1:exon

position:17605600:1
position: 17605600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17615589-17615669:1:exon

position:17615589:1
position: 17615589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17615669:1
position: 17615669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17617311-17618479:1:exon

position:17617311:1
position: 17617311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TENM2
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: TENM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17659430..20435763)
location: region:17659430-20435763:-1
so has part: feature:17659430-20435763:-1:exon
subclass of: SO_0000010

115079886
type: Gene
SIO_000068: ncbigene

position:17659430:-1
position: 17659430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20435763:-1
position: 20435763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17659430-20435763:-1:exon

TENM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 194408
gene: TENM2
product: teneurin transmembrane protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029583832.1
SIO_010081: TENM2
subclass of: SO_0000673
so part of: TENM2
location: complement(join(17659430..17661308,17664874..17665004,17682451..17684065,17686674..17686970,17699177..17699412,17713306..17713481,17720972..17721846,17724049..17724203,17726450..17726685,17729194..17729214,17737517..17737766,17739027..17739170,17741463..17741730,17745655..17745916,17748295..17748414,17758742..17758952,17843949..17844095,17920764..17920949,17922505..17922705,17933370..17933564,17968731..17968832,17997520..17997715,18010453..18010658,18069255..18069377,18204633..18204871,18288232..18288466,18497258..18497467,18695294..18695365,19676238..19676513,19870974..19871279,20199493..20199597,20435081..20435763))
location: region:17659430-20435763:-1
so has part: feature:20435081-20435763:-1:exon
so has part: feature:20199493-20199597:-1:exon
so has part: feature:19870974-19871279:-1:exon
so has part: feature:19676238-19676513:-1:exon
so has part: feature:18695294-18695365:-1:exon
so has part: feature:18497258-18497467:-1:exon
so has part: feature:18288232-18288466:-1:exon
so has part: feature:18204633-18204871:-1:exon
so has part: feature:18069255-18069377:-1:exon
so has part: feature:18010453-18010658:-1:exon
so has part: feature:17997520-17997715:-1:exon
so has part: feature:17968731-17968832:-1:exon
so has part: feature:17933370-17933564:-1:exon
so has part: feature:17922505-17922705:-1:exon
so has part: feature:17920764-17920949:-1:exon
so has part: feature:17843949-17844095:-1:exon
so has part: feature:17758742-17758952:-1:exon
so has part: feature:17748295-17748414:-1:exon
so has part: feature:17745655-17745916:-1:exon
so has part: feature:17741463-17741730:-1:exon
so has part: feature:17739027-17739170:-1:exon
so has part: feature:17737517-17737766:-1:exon
so has part: feature:17729194-17729214:-1:exon
so has part: feature:17726450-17726685:-1:exon
so has part: feature:17724049-17724203:-1:exon
so has part: feature:17720972-17721846:-1:exon
so has part: feature:17713306-17713481:-1:exon
so has part: feature:17699177-17699412:-1:exon
so has part: feature:17686674-17686970:-1:exon
so has part: feature:17682451-17684065:-1:exon
so has part: feature:17664874-17665004:-1:exon
so has part: feature:17659430-17661308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20435081-20435763:-1:exon

position:20435081:-1
position: 20435081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:20199493-20199597:-1:exon

position:20199493:-1
position: 20199493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20199597:-1
position: 20199597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19870974-19871279:-1:exon

position:19870974:-1
position: 19870974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19871279:-1
position: 19871279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19676238-19676513:-1:exon

position:19676238:-1
position: 19676238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19676513:-1
position: 19676513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:18695294-18695365:-1:exon

position:18695294:-1
position: 18695294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18695365:-1
position: 18695365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:18497258-18497467:-1:exon

position:18497258:-1
position: 18497258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18497467:-1
position: 18497467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:18288232-18288466:-1:exon

position:18288232:-1
position: 18288232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18288466:-1
position: 18288466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:18204633-18204871:-1:exon

position:18204633:-1
position: 18204633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18204871:-1
position: 18204871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:18069255-18069377:-1:exon

position:18069255:-1
position: 18069255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18069377:-1
position: 18069377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:18010453-18010658:-1:exon

position:18010453:-1
position: 18010453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18010658:-1
position: 18010658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:17997520-17997715:-1:exon

position:17997520:-1
position: 17997520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17997715:-1
position: 17997715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:17968731-17968832:-1:exon

position:17968731:-1
position: 17968731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17968832:-1
position: 17968832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:17933370-17933564:-1:exon

position:17933370:-1
position: 17933370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17933564:-1
position: 17933564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:17922505-17922705:-1:exon

position:17922505:-1
position: 17922505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17922705:-1
position: 17922705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:17920764-17920949:-1:exon

position:17920764:-1
position: 17920764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17920949:-1
position: 17920949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:17843949-17844095:-1:exon

position:17843949:-1
position: 17843949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17844095:-1
position: 17844095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:17758742-17758952:-1:exon

position:17758742:-1
position: 17758742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17758952:-1
position: 17758952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:17748295-17748414:-1:exon

position:17748295:-1
position: 17748295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17748414:-1
position: 17748414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:17745655-17745916:-1:exon

position:17745655:-1
position: 17745655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17745916:-1
position: 17745916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:17741463-17741730:-1:exon

position:17741463:-1
position: 17741463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17741730:-1
position: 17741730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:17739027-17739170:-1:exon

position:17739027:-1
position: 17739027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17739170:-1
position: 17739170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:17737517-17737766:-1:exon

position:17737517:-1
position: 17737517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17737766:-1
position: 17737766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:17729194-17729214:-1:exon

position:17729194:-1
position: 17729194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17729214:-1
position: 17729214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:17726450-17726685:-1:exon

position:17726450:-1
position: 17726450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17726685:-1
position: 17726685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:17724049-17724203:-1:exon

position:17724049:-1
position: 17724049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17724203:-1
position: 17724203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:17720972-17721846:-1:exon

position:17720972:-1
position: 17720972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17721846:-1
position: 17721846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:17713306-17713481:-1:exon

position:17713306:-1
position: 17713306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17713481:-1
position: 17713481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:17699177-17699412:-1:exon

position:17699177:-1
position: 17699177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17699412:-1
position: 17699412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:17686674-17686970:-1:exon

position:17686674:-1
position: 17686674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17686970:-1
position: 17686970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:17682451-17684065:-1:exon

position:17682451:-1
position: 17682451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17684065:-1
position: 17684065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:17664874-17665004:-1:exon

position:17664874:-1
position: 17664874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17665004:-1
position: 17665004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:17659430-17661308:-1:exon

position:17661308:-1
position: 17661308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TENM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 194408
gene: TENM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-2
translation: MDIKDRRQRSLSKGRCGKECRYTSSSLDSEDCRVPTQKSYSSSETLKAYDHDARVHYGNRVSDLVHRESEEFPRQGTNFTLAELGICEPSPHRSGYCSDIGMLHQGYSLGTGSDGDSDTEGGLSPEHAIRLWGRGIKSRRSSGLSSRDNSALTLTDSDNENKSDDENGFNHYLHDASRPYAQEQEELVAVHSRPIPPTSSSSLLPSAQLASSHNPPPVSCQMPLLDSNTSHQIMDTNPDEEFSPNSYLLRACSGPQQASSSGPPNHHSQSTLRPPLPPPHNHTLSHHHSSANSLNRNSLTNRRNQIHAPPPAPNDLATTPESVQLQDSWVLNSNVPLETRHFLFKTSSGTTPLFSSSSPGYPLTSGTVYTPPPRLLPRNTFSRNAFKLKKPSKYCSWKCAALSAIAAALLLAILLAYFIAMHLLGLNWQLQPADGHTFNNGIRTGLPGSDDVVTMPSGGRGPWAPRNSSIDTGEIEVGRRVTQEVPAGVFWRSQIHISQPQFLKFNISLGKDALFGVYIRRGLAPSHAQYDFMERLDGKEKWSVVESPRERRSIQTLIQNEAVFVQYLDVGLWHLAFYNDGKDKEIVSFSTVVLDSVQDCPRSCHGNGECVSGVCHCFPGFHGADCAKAACPVLCSGNGQYSRGTCVCYSGWKGPECDVPSSQCIDPSCGNHGSCIDGNCVCSVGYKGEHCEEVDCLDPVCSNHGVCVNGECLCSPGWGGQNCEHPRAQCPDQCSGHGTYLSDTGLCSCDPNWMGPDCSVELCSVDCGTHGVCIGGACRCEEGWTGLACDQRVCHPRCTEHGTCKDGKCECKEGWNGEHCTIDGCPDLCNGNGRCSLGQNSWQCICQTGWRGPGCNVAMETSCADNKDNEGDGLVDCLDPDCCLQSACQSSLLCRGSRDPLDIIQQSQSGSPAVKSFYERIKLLMGKDSTHIIPGENPFNSSLVSLIRGQVVTTDGTPLVGVNVSFVKYPKYGYTITRQDGTFDLIANGGSSLTLHFERAPFMSQERTVWLPWNSFYAMDTLAMKTEENSIPSCDLSGFVRPDPVIISSPLSTFFSSAPGHNPIVPETQVLHEAIEMLGSNLRLCYLSSRTPGYKSLLKITMTQSLAPLNLIKVHLMVAVEGHLYQKSFQASPNLAYTFIWDKNDAYGQKVYGLADAVVSVGFEYETCPGLILWEKRTTVLQGFELIPSNLGGWSLDKHHILNVRSGVLHKGSGENQFLSQQPAIISSIMGNGRKRSIYCPTCYGLAEGNKLLAPMALAVGIDGSLFVGDVNYIRRISPSRNVTSILELRNKEFKHSNSPGHKYYLAVDPVSGSLFISDTNSRRIYRVKYLSGSKDLVGNSEVVAGTGDQCMMPFTEARCGDGGKAVEALLINPRGIAVDKNGLMYFVDATMIRKVDQNGIISTLLGSNELAAGRPLSCDSSMDVTQVRLEWPTDLAVNPMDNSLYVLENNVILQITENHQVRIIAGRPMHCQVPGIDYSLSKLAIHSALESASAIALSHTGILYIAETDEKRINRLRQVTTNGEISLLAGASSDCDCKDDANCNCYSGDDGYATDAILNCPSSLAVAPDGTIYIADLGNFRIRAVNQNKPVLSSTNQYEIASPGEQELYVFNANGIHQNTISLVTGEYLYNFTYNAENDLIEVVDNNGNSLKIRREINGTPRHFLMPDNQIVTLTVTTNGGLKIVSTQNLELALMTYDGTTGLLATKSDETGWTTFYDYDSEGRLTNVTRPTGVVTSLHREMEKSITIDIENSNRDDDVTVITNLSSVEASYTVVQDQVRNSYQLCNNGTLRVIYANGMGISFHSEPHILAGTVTPTLGRRNISLPLENGLNSIEWRLRKEQTKGKVTVFGRKLRVHGRNLLSIDFDRNSHTEKVYDDHRKFTLRIVYDQLGRPLLWLPSSGLAPVNVSYFFNGRLSGLQRGAMSERTEIDKQGRITSRTFADGKVWSYTYLEKSMVLLLQSQRQYIFEYDMSDRLQAVTMPSVARHSMSTHTSIGYIR…
SIO_010081: TENM2
subclass of: SO_0000673
so part of: TENM2
location: complement(join(17660547..17661308,17664874..17665004,17682451..17684065,17686674..17686970,17699177..17699412,17713306..17713481,17720972..17721846,17724049..17724203,17726450..17726685,17729194..17729214,17737517..17737766,17739027..17739170,17741463..17741730,17745655..17745916,17748295..17748414,17758742..17758952,17843949..17844095,17920764..17920949,17922505..17922705,17933370..17933564,17968731..17968832,17997520..17997715,18010453..18010658,18069255..18069377,18204633..18204871,18288232..18288466,18497258..18497467,18695294..18695365,19676238..19676513,19870974..19871199))
location: region:17660547-19871199:-1
so has part: feature:19870974-19871199:-1:exon
so has part: feature:19676238-19676513:-1:exon
so has part: feature:18695294-18695365:-1:exon
so has part: feature:18497258-18497467:-1:exon
so has part: feature:18288232-18288466:-1:exon
so has part: feature:18204633-18204871:-1:exon
so has part: feature:18069255-18069377:-1:exon
so has part: feature:18010453-18010658:-1:exon
so has part: feature:17997520-17997715:-1:exon
so has part: feature:17968731-17968832:-1:exon
so has part: feature:17933370-17933564:-1:exon
so has part: feature:17922505-17922705:-1:exon
so has part: feature:17920764-17920949:-1:exon
so has part: feature:17843949-17844095:-1:exon
so has part: feature:17758742-17758952:-1:exon
so has part: feature:17748295-17748414:-1:exon
so has part: feature:17745655-17745916:-1:exon
so has part: feature:17741463-17741730:-1:exon
so has part: feature:17739027-17739170:-1:exon
so has part: feature:17737517-17737766:-1:exon
so has part: feature:17729194-17729214:-1:exon
so has part: feature:17726450-17726685:-1:exon
so has part: feature:17724049-17724203:-1:exon
so has part: feature:17720972-17721846:-1:exon
so has part: feature:17713306-17713481:-1:exon
so has part: feature:17699177-17699412:-1:exon
so has part: feature:17686674-17686970:-1:exon
so has part: feature:17682451-17684065:-1:exon
so has part: feature:17664874-17665004:-1:exon
so has part: feature:17660547-17661308:-1:exon

XP_029439692.1
type: Protein
SIO_000068: ncbiprotein

position:17660547:-1
position: 17660547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19871199:-1
position: 19871199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19870974-19871199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19676238-19676513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18695294-18695365:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18497258-18497467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18288232-18288466:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:18204633-18204871:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18069255-18069377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:18010453-18010658:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17997520-17997715:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17968731-17968832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17933370-17933564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17922505-17922705:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17920764-17920949:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17843949-17844095:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17758742-17758952:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:17748295-17748414:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:17745655-17745916:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:17741463-17741730:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:17739027-17739170:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:17737517-17737766:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:17729194-17729214:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:17726450-17726685:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:17724049-17724203:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:17720972-17721846:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:17713306-17713481:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:17699177-17699412:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:17686674-17686970:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:17682451-17684065:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:17664874-17665004:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:17660547-17661308:-1:exon

LOC115079874
type: Gene
subclass of: SO_0000704
RO_0002162: 194408
gene: LOC115079874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 21472789..21642884
location: region:21472789-21642884:1
so has part: feature:21472789-21642884:1:exon
subclass of: SO_0000011

115079874
type: Gene
SIO_000068: ncbigene

position:21472789:1
position: 21472789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21642884:1
position: 21642884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21472789-21642884:1:exon

LOC115079874
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 194408
nc RNA class: lncRNA
gene: LOC115079874
product: uncharacterized LOC115079874
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003853424.1
SIO_010081: LOC115079874
subclass of: SO_0000673
so part of: LOC115079874
location: join(21472789..21472893,21628561..21628855,21642835..21642884)
location: region:21472789-21642884:1
so has part: feature:21472789-21472893:1:exon
so has part: feature:21628561-21628855:1:exon
so has part: feature:21642835-21642884:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21472789-21472893:1:exon

position:21472893:1
position: 21472893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21628561-21628855:1:exon

position:21628561:1
position: 21628561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21628855:1
position: 21628855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:21642835-21642884:1:exon

position:21642835:1
position: 21642835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition