Ponticoccus alexandrii strain C31 plasmid p-SCP4, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Ponticoccus.
Complete Genome Sequence of a Quorum-Sensing Bacterium,Rhodobacteraceae bacterium C31, Isolated from a marine microalgae symbiotic bacteria
Submitted (12-DEC-2019) Ecological center, First Institute of Oceanography, MNR, 6 Xianxialing Road, Laoshan District, QingDao 266061, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP047170.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 2.3\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 150.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 06/17/2023 04:59:53\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,836\nCDSs (total) :: 4,782\nGenes (coding) :: 4,651\nCDSs (with protein) :: 4,651\nGenes (RNA) :: 54\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 3\nPseudo Genes (total) :: 131\nCDSs (without protein) :: 131\nPseudo Genes (ambiguous residues) :: 0 of 131\nPseudo Genes (frameshifted) :: 66 of 131\nPseudo Genes (incomplete) :: 94 of 131\nPseudo Genes (internal stop) :: 29 of 131\nPseudo Genes (multiple problems) :: 50 of 131\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
shallow sea, symbosis with harmful algal bloom algae
COORDINATES: similar to AA sequence:RefSeq:WP_015314479.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003492157.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017269772.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003516944.1
COORDINATES: similar to AA sequence:RefSeq:WP_007607268.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_010443739.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007120551.1
COORDINATES: similar to AA sequence:RefSeq:WP_005616530.1
GO:0006817 - phosphate ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005619292.1
GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
class 1b ribonucleoside-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011537867.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
class 1b ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011750602.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
COORDINATES: similar to AA sequence:RefSeq:WP_011537869.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_008596368.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008596367.1
COORDINATES: similar to AA sequence:RefSeq:WP_008596366.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018031.2
IucA/IucC family C-terminal-domain containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020226583.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_005859584.1
COORDINATES: protein motif:HMM:NF021127.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
GO:0045227 - capsule polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005977979.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO:0000256 - allantoin catabolic process [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015445.2
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF016200.2
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005859577.1
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF019349.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005859569.1
GO:0055085 - transmembrane transport [Evidence IEA]
TRAP transporter substrate-binding protein DctP
COORDINATES: similar to AA sequence:RefSeq:WP_005859564.1
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013696.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005859556.1
COORDINATES: similar to AA sequence:RefSeq:WP_008945093.1
COORDINATES: similar to AA sequence:RefSeq:WP_008945092.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018001482.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015344 - siderophore uptake transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
FepA family TonB-dependent siderophore receptor
COORDINATES: similar to AA sequence:RefSeq:WP_009803655.1
COORDINATES: similar to AA sequence:RefSeq:WP_008508744.1
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
aminodeoxychorismate synthase component I
COORDINATES: similar to AA sequence:RefSeq:WP_009505447.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009505446.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009505445.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_009572671.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011807868.1
GO:0050112 - inositol 2-dehydrogenase activity [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018687811.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013795439.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009572675.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018634316.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018237071.1
GO:0047590 - 5-dehydro-2-deoxygluconokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009572678.1
GO:0016823 - hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)
COORDINATES: similar to AA sequence:RefSeq:WP_018687817.1
GO:0050114 - myo-inosose-2 dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018687818.1
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009811735.1
COORDINATES: similar to AA sequence:RefSeq:WP_008872725.1
bifunctional sugar-binding transcriptional regulator/dihydroxyacetone kinase subunit DhaK
COORDINATES: similar to AA sequence:RefSeq:WP_017264418.1
GO:0004371 - glycerone kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020487511.1
COORDINATES: similar to AA sequence:RefSeq:WP_003521374.1
COORDINATES: similar to AA sequence:RefSeq:WP_006471931.1
COORDINATES: similar to AA sequence:RefSeq:WP_007878576.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018097947.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014006169.1
COORDINATES: similar to AA sequence:RefSeq:WP_005858671.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005858673.1
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005858675.1
COORDINATES: similar to AA sequence:RefSeq:WP_008885378.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013653796.1
GO:0004411 - homogentisate 1,2-dioxygenase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009571548.1
COORDINATES: similar to AA sequence:RefSeq:WP_009502657.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: similar to AA sequence:RefSeq:WP_008885701.1
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008282175.1
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_015499370.1
COORDINATES: similar to AA sequence:RefSeq:WP_008884205.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005651385.1
COORDINATES: similar to AA sequence:RefSeq:WP_008555664.1
COORDINATES: similar to AA sequence:RefSeq:WP_009176643.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012328941.1
COORDINATES: similar to AA sequence:RefSeq:WP_018494307.1
COORDINATES: similar to AA sequence:RefSeq:WP_008876047.1
COORDINATES: similar to AA sequence:RefSeq:WP_004117229.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007006971.1
COORDINATES: similar to AA sequence:RefSeq:WP_018328245.1
COORDINATES: similar to AA sequence:RefSeq:WP_018097170.1
GO:0003824 - catalytic activity [Evidence IEA]
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013762314.1
COORDINATES: similar to AA sequence:RefSeq:WP_013078962.1
COORDINATES: similar to AA sequence:RefSeq:WP_018185336.1
COORDINATES: similar to AA sequence:RefSeq:WP_003534630.1
MaoC/PaaZ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012652433.1
COORDINATES: similar to AA sequence:RefSeq:WP_018097173.1
COORDINATES: similar to AA sequence:RefSeq:WP_018064047.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008203993.1
COORDINATES: similar to AA sequence:RefSeq:WP_006072047.1
COORDINATES: similar to AA sequence:RefSeq:WP_008203991.1
COORDINATES: similar to AA sequence:RefSeq:WP_011537014.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017991976.1
COORDINATES: protein motif:HMM:NF020090.2
COORDINATES: similar to AA sequence:RefSeq:WP_020040956.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_011456899.1
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020040958.1
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020040959.1
COORDINATES: similar to AA sequence:RefSeq:WP_020040960.1
COORDINATES: similar to AA sequence:RefSeq:WP_008883750.1
COORDINATES: protein motif:HMM:NF024949.2
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020039174.1
autoinducer binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020039175.1
COORDINATES: similar to AA sequence:RefSeq:WP_007089280.1
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
thiamine pyrophosphate-requiring protein
COORDINATES: similar to AA sequence:RefSeq:WP_010914658.1
COORDINATES: similar to AA sequence:RefSeq:WP_011582363.1
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011582362.1
COORDINATES: protein motif:HMM:NF018979.2
COORDINATES: similar to AA sequence:RefSeq:WP_018699211.1
GO:0042597 - periplasmic space [Evidence IEA]
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011582359.1
COORDINATES: similar to AA sequence:RefSeq:WP_011582358.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: similar to AA sequence:RefSeq:WP_007253674.1
GO:0000287 - magnesium ion binding [Evidence IEA]
RuBisCO large subunit C-terminal-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010660469.1
transketolase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018689270.1
GO:0016624 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008034245.1
COORDINATES: similar to AA sequence:RefSeq:WP_013458808.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_007253679.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008595515.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007253681.1
COORDINATES: similar to AA sequence:RefSeq:WP_008595511.1
COORDINATES: similar to AA sequence:RefSeq:WP_010988054.1
COORDINATES: similar to AA sequence:RefSeq:WP_018689263.1
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008593553.1
COORDINATES: similar to AA sequence:RefSeq:WP_009762989.1
COORDINATES: similar to AA sequence:RefSeq:WP_018067104.1
COORDINATES: similar to AA sequence:RefSeq:WP_009489409.1
COORDINATES: similar to AA sequence:RefSeq:WP_009489410.1
COORDINATES: similar to AA sequence:RefSeq:WP_020573166.1
neutral/alkaline non-lysosomal ceramidase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007007214.1
COORDINATES: similar to AA sequence:RefSeq:WP_018067109.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
sugar isomerase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018859984.1
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018067111.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF017652.2
GO:0019475 - L-lysine catabolic process to acetate [Evidence IEA]
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_004582366.1
COORDINATES: similar to AA sequence:RefSeq:WP_006940274.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006940272.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020286731.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018011737.1
COORDINATES: similar to AA sequence:RefSeq:WP_015316335.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015316334.1
COORDINATES: similar to AA sequence:RefSeq:WP_017875719.1
COORDINATES: similar to AA sequence:RefSeq:WP_015316332.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015316331.1
COORDINATES: similar to AA sequence:RefSeq:WP_010975049.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018095913.1
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_015008706.1
COORDINATES: similar to AA sequence:RefSeq:WP_010975047.1
COORDINATES: similar to AA sequence:RefSeq:WP_005863704.1
COORDINATES: similar to AA sequence:RefSeq:WP_005863702.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694774.1
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005863699.1
COORDINATES: similar to AA sequence:RefSeq:WP_005863697.1
COORDINATES: similar to AA sequence:RefSeq:WP_002723126.1
COORDINATES: similar to AA sequence:RefSeq:WP_011842357.1
COORDINATES: similar to AA sequence:RefSeq:WP_017969201.1
COORDINATES: similar to AA sequence:RefSeq:WP_009565161.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019200 - carbohydrate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003518260.1
COORDINATES: similar to AA sequence:RefSeq:WP_002723119.1
COORDINATES: similar to AA sequence:RefSeq:WP_009565164.1
COORDINATES: similar to AA sequence:RefSeq:WP_007822123.1
COORDINATES: similar to AA sequence:RefSeq:WP_002723116.1
COORDINATES: similar to AA sequence:RefSeq:WP_015918548.1
COORDINATES: similar to AA sequence:RefSeq:WP_011970641.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009563533.1
COORDINATES: similar to AA sequence:RefSeq:WP_015923186.1
COORDINATES: similar to AA sequence:RefSeq:WP_019431093.1
COORDINATES: similar to AA sequence:RefSeq:WP_011568430.1
COORDINATES: similar to AA sequence:RefSeq:WP_015499707.1
COORDINATES: similar to AA sequence:RefSeq:WP_012177558.1
COORDINATES: similar to AA sequence:RefSeq:WP_009175819.1
COORDINATES: similar to AA sequence:RefSeq:WP_009830482.1
COORDINATES: similar to AA sequence:RefSeq:WP_013961298.1
COORDINATES: similar to AA sequence:RefSeq:WP_007562078.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910778.1
COORDINATES: similar to AA sequence:RefSeq:WP_006020128.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_006020129.1
branched-chain amino acid ABC transporter ATP-binding protein/permease
COORDINATES: similar to AA sequence:RefSeq:WP_020091909.1
COORDINATES: similar to AA sequence:RefSeq:WP_012319850.1
COORDINATES: similar to AA sequence:RefSeq:WP_012179103.1
COORDINATES: similar to AA sequence:RefSeq:WP_005862133.1
COORDINATES: similar to AA sequence:RefSeq:WP_019404713.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749637.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005752182.1
COORDINATES: similar to AA sequence:RefSeq:WP_019013433.1
COORDINATES: similar to AA sequence:RefSeq:WP_009491724.1
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_007009172.1
COORDINATES: similar to AA sequence:RefSeq:WP_012187348.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_009810588.1
COORDINATES: similar to AA sequence:RefSeq:WP_014878828.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012813006.1
COORDINATES: similar to AA sequence:RefSeq:WP_009756467.1
COORDINATES: similar to AA sequence:RefSeq:WP_007121132.1
COORDINATES: similar to AA sequence:RefSeq:WP_005848778.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611126.1
GO:0015074 - DNA integration [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007791754.1
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016258.2
GO:0019867 - outer membrane [Evidence IEA]
outer membrane protein assembly factor BamE
COORDINATES: similar to AA sequence:RefSeq:WP_019043099.1
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015867365.1
COORDINATES: protein motif:HMM:NF037016.2
COORDINATES: protein motif:HMM:NF012422.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_076611992.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009176821.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004736 - pyruvate carboxylase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018261768.1
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_009158139.1
COORDINATES: similar to AA sequence:RefSeq:WP_008182760.1
COORDINATES: similar to AA sequence:RefSeq:WP_014954567.1
COORDINATES: similar to AA sequence:RefSeq:WP_008968279.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: protein motif:HMM:NF024698.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008884852.1
COORDINATES: similar to AA sequence:RefSeq:WP_008883656.1
COORDINATES: similar to AA sequence:RefSeq:WP_008884086.1
COORDINATES: similar to AA sequence:RefSeq:WP_008885681.1
COORDINATES: similar to AA sequence:RefSeq:WP_009562115.1
aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_009572588.1
2Fe-2S iron-sulfur cluster binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009572587.1
aromatic/alkene monooxygenase hydroxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_002720016.1
COORDINATES: similar to AA sequence:RefSeq:WP_013946116.1
COORDINATES: similar to AA sequence:RefSeq:WP_015920566.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009572584.1
COORDINATES: similar to AA sequence:RefSeq:WP_008884951.1
COORDINATES: similar to AA sequence:RefSeq:WP_018390023.1
COORDINATES: similar to AA sequence:RefSeq:WP_007795360.1
COORDINATES: similar to AA sequence:RefSeq:WP_011568403.1
twin-arginine translocation pathway signal
COORDINATES: similar to AA sequence:RefSeq:WP_009819198.1
COORDINATES: similar to AA sequence:RefSeq:WP_008883745.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008885939.1
COORDINATES: similar to AA sequence:RefSeq:WP_009572576.1
COORDINATES: similar to AA sequence:RefSeq:WP_007257056.1
COORDINATES: similar to AA sequence:RefSeq:WP_012554517.1
COORDINATES: similar to AA sequence:RefSeq:WP_007801650.1
COORDINATES: similar to AA sequence:RefSeq:WP_007801651.1
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007762848.1
COORDINATES: similar to AA sequence:RefSeq:WP_005857567.1
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009159681.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014860267.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_019098371.1
COORDINATES: similar to AA sequence:RefSeq:WP_009467505.1
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: similar to AA sequence:RefSeq:WP_007256426.1
COORDINATES: similar to AA sequence:RefSeq:WP_019965574.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_008885753.1
COORDINATES: similar to AA sequence:RefSeq:WP_008886157.1
COORDINATES: similar to AA sequence:RefSeq:WP_008885921.1
isocitrate lyase/PEP mutase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008884181.1
COORDINATES: similar to AA sequence:RefSeq:WP_006468413.1
COORDINATES: similar to AA sequence:RefSeq:WP_018430131.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015343232.1
COORDINATES: similar to AA sequence:RefSeq:WP_008874176.1
COORDINATES: similar to AA sequence:RefSeq:WP_018856007.1
COORDINATES: similar to AA sequence:RefSeq:WP_020710682.1
COORDINATES: similar to AA sequence:RefSeq:WP_014266090.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008741 - ribulokinase activity [Evidence IEA]
GO:0019569 - L-arabinose catabolic process to xylulose 5-phosphate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011911139.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011911138.1
COORDINATES: similar to AA sequence:RefSeq:WP_005859762.1
COORDINATES: similar to AA sequence:RefSeq:WP_005859760.1
COORDINATES: similar to AA sequence:RefSeq:WP_020042056.1
COORDINATES: similar to AA sequence:RefSeq:WP_020042055.1
COORDINATES: protein motif:HMM:NF012678.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020042052.1
COORDINATES: similar to AA sequence:RefSeq:WP_020042051.1
COORDINATES: similar to AA sequence:RefSeq:WP_010969406.1
COORDINATES: similar to AA sequence:RefSeq:WP_009570225.1
COORDINATES: similar to AA sequence:RefSeq:WP_007799259.1
COORDINATES: similar to AA sequence:RefSeq:WP_009827317.1
COORDINATES: similar to AA sequence:RefSeq:WP_007120936.1
COORDINATES: similar to AA sequence:RefSeq:WP_013959842.1
COORDINATES: similar to AA sequence:RefSeq:WP_006204730.1
COORDINATES: similar to AA sequence:RefSeq:WP_010442313.1
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011331389.1
COORDINATES: similar to AA sequence:RefSeq:WP_009824261.1
DnaA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012559743.1
COORDINATES: similar to AA sequence:RefSeq:WP_013962535.1
COORDINATES: protein motif:HMM:NF012264.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF019350.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03865.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009466019.1
COORDINATES: similar to AA sequence:RefSeq:WP_013067123.1
quinoprotein dehydrogenase-associated SoxYZ-like carrier
COORDINATES: similar to AA sequence:RefSeq:WP_013067122.1
quinoprotein relay system zinc metallohydrolase 1
COORDINATES: similar to AA sequence:RefSeq:WP_013067121.1
PQQ-dependent methanol/ethanol family dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013067120.1
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011047130.1
COORDINATES: similar to AA sequence:RefSeq:WP_009522551.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019952362.1
COORDINATES: similar to AA sequence:RefSeq:WP_017268874.1
COORDINATES: similar to AA sequence:RefSeq:WP_011969380.1
COORDINATES: similar to AA sequence:RefSeq:WP_019952358.1
COORDINATES: similar to AA sequence:RefSeq:WP_018317596.1
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_005861162.1
COORDINATES: similar to AA sequence:RefSeq:WP_005861161.1
COORDINATES: similar to AA sequence:RefSeq:WP_005861158.1
COORDINATES: similar to AA sequence:RefSeq:WP_005861157.1
COORDINATES: similar to AA sequence:RefSeq:WP_007817708.1
COORDINATES: similar to AA sequence:RefSeq:WP_005861154.1
COORDINATES: similar to AA sequence:RefSeq:WP_005861152.1
COORDINATES: similar to AA sequence:RefSeq:WP_007817702.1
COORDINATES: similar to AA sequence:RefSeq:WP_010139017.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010139018.1
COORDINATES: similar to AA sequence:RefSeq:WP_010139019.1
COORDINATES: similar to AA sequence:RefSeq:WP_006227051.1
COORDINATES: similar to AA sequence:RefSeq:WP_006390494.1
COORDINATES: similar to AA sequence:RefSeq:WP_019701454.1
COORDINATES: similar to AA sequence:RefSeq:WP_010139023.1
COORDINATES: similar to AA sequence:RefSeq:WP_008888175.1
COORDINATES: similar to AA sequence:RefSeq:WP_005861600.1
COORDINATES: similar to AA sequence:RefSeq:WP_005861598.1
COORDINATES: similar to AA sequence:RefSeq:WP_006310925.1
COORDINATES: similar to AA sequence:RefSeq:WP_005861595.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0005488 - binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
DctP family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005861593.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005861591.1
COORDINATES: similar to AA sequence:RefSeq:WP_005861589.1
COORDINATES: similar to AA sequence:RefSeq:WP_009813232.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_019297403.1
COORDINATES: similar to AA sequence:RefSeq:WP_011047294.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011568321.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_009158615.1
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_030003205.1
COORDINATES: similar to AA sequence:RefSeq:WP_020044207.1
COORDINATES: similar to AA sequence:RefSeq:WP_009159278.1
GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020044190.1
COORDINATES: similar to AA sequence:RefSeq:WP_013963485.1
COORDINATES: similar to AA sequence:RefSeq:WP_020044192.1
COORDINATES: similar to AA sequence:RefSeq:WP_013963483.1
COORDINATES: similar to AA sequence:RefSeq:WP_011047307.1
GO:0008465 - glycerate dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011570293.1
GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]
GO:0015977 - carbon fixation [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009760131.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013960551.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008280792.1
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
FMN-binding glutamate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009818607.1
COORDINATES: similar to AA sequence:RefSeq:WP_009818608.1
glutamine amidotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010437786.1
COORDINATES: similar to AA sequence:RefSeq:WP_009818610.1
COORDINATES: similar to AA sequence:RefSeq:WP_011047316.1
COORDINATES: similar to AA sequence:RefSeq:WP_009159134.1
dimethylamine monooxygenase subunit DmmA
COORDINATES: similar to AA sequence:RefSeq:WP_011047318.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008280800.1
COORDINATES: similar to AA sequence:RefSeq:WP_011566369.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019294533.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011566953.1
COORDINATES: similar to AA sequence:RefSeq:WP_008887962.1
COORDINATES: similar to AA sequence:RefSeq:WP_011567214.1
COORDINATES: similar to AA sequence:RefSeq:WP_011338946.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002723350.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020038226.1
COORDINATES: similar to AA sequence:RefSeq:WP_007803282.1
COORDINATES: similar to AA sequence:RefSeq:WP_018897844.1
COORDINATES: similar to AA sequence:RefSeq:WP_009210681.1
COORDINATES: similar to AA sequence:RefSeq:WP_009208185.1
COORDINATES: similar to AA sequence:RefSeq:WP_007009176.1
COORDINATES: similar to AA sequence:RefSeq:WP_008335478.1
COORDINATES: similar to AA sequence:RefSeq:WP_005855326.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008886463.1
COORDINATES: similar to AA sequence:RefSeq:WP_008886754.1
COORDINATES: similar to AA sequence:RefSeq:WP_010142376.1
COORDINATES: similar to AA sequence:RefSeq:WP_005855334.1
COORDINATES: similar to AA sequence:RefSeq:WP_008887015.1
COORDINATES: similar to AA sequence:RefSeq:WP_005862444.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_005862442.1
GO:0009027 - tartrate dehydrogenase activity [Evidence IEA]
GO:0046395 - carboxylic acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008887898.1
COORDINATES: similar to AA sequence:RefSeq:WP_005862438.1
COORDINATES: similar to AA sequence:RefSeq:WP_005862436.1
COORDINATES: protein motif:HMM:NF037026.2
COORDINATES: similar to AA sequence:RefSeq:WP_015886760.1
GO:0008777 - acetylornithine deacetylase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010973012.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005862430.1
COORDINATES: similar to AA sequence:RefSeq:WP_008840160.1
COORDINATES: similar to AA sequence:RefSeq:WP_014332698.1
COORDINATES: similar to AA sequence:RefSeq:WP_005862424.1
COORDINATES: similar to AA sequence:RefSeq:WP_005862421.1
COORDINATES: similar to AA sequence:RefSeq:WP_005862419.1
COORDINATES: similar to AA sequence:RefSeq:WP_018098080.1
COORDINATES: similar to AA sequence:RefSeq:WP_008840174.1
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005862412.1
COORDINATES: similar to AA sequence:RefSeq:WP_006610497.1
COORDINATES: similar to AA sequence:RefSeq:WP_005862450.1
COORDINATES: similar to AA sequence:RefSeq:WP_015499110.1
GO:0046872 - metal ion binding [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]
metal ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007801285.1
manganese/iron ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013385380.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013385379.1
COORDINATES: similar to AA sequence:RefSeq:WP_011540061.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006940259.1
COORDINATES: similar to AA sequence:RefSeq:WP_008195098.1
COORDINATES: similar to AA sequence:RefSeq:WP_009177367.1
COORDINATES: similar to AA sequence:RefSeq:WP_008189857.1
COORDINATES: similar to AA sequence:RefSeq:WP_007161899.1
COORDINATES: similar to AA sequence:RefSeq:WP_007800161.1
COORDINATES: similar to AA sequence:RefSeq:WP_013395486.1
COORDINATES: similar to AA sequence:RefSeq:WP_008141948.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013512062.1
COORDINATES: similar to AA sequence:RefSeq:WP_019994508.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011086754.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011427803.1
succinylglutamate desuccinylase/aspartoacylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019402576.1
COORDINATES: similar to AA sequence:RefSeq:WP_009807739.1
COORDINATES: similar to AA sequence:RefSeq:WP_012178959.1
COORDINATES: similar to AA sequence:RefSeq:WP_010973441.1
catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF016462.2
COORDINATES: similar to AA sequence:RefSeq:WP_005861965.1
COORDINATES: similar to AA sequence:RefSeq:WP_006338733.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009804489.1
GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IEA]
GO:0016054 - organic acid catabolic process [Evidence IEA]
hydroxymethylglutaryl-CoA reductase, degradative
COORDINATES: similar to AA sequence:RefSeq:WP_011241943.1
COORDINATES: similar to AA sequence:RefSeq:WP_009804487.1
COORDINATES: similar to AA sequence:RefSeq:WP_009804486.1
COORDINATES: similar to AA sequence:RefSeq:WP_013165040.1
COORDINATES: similar to AA sequence:RefSeq:WP_005863026.1
COORDINATES: similar to AA sequence:RefSeq:WP_008883665.1
COORDINATES: similar to AA sequence:RefSeq:WP_008884244.1
COORDINATES: similar to AA sequence:RefSeq:WP_008883984.1
COORDINATES: similar to AA sequence:RefSeq:WP_008204167.1
COORDINATES: similar to AA sequence:RefSeq:WP_008204166.1
2,4'-dihydroxyacetophenone dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020400261.1
COORDINATES: similar to AA sequence:RefSeq:WP_019950224.1
COORDINATES: similar to AA sequence:RefSeq:WP_008282115.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008757404.1
GO:0050334 - thiaminase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005605912.1
COORDINATES: similar to AA sequence:RefSeq:WP_009178366.1
COORDINATES: similar to AA sequence:RefSeq:WP_005605915.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011537258.1
GO:1990107 - thiazole synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005605921.1
COORDINATES: similar to AA sequence:RefSeq:WP_008757103.1
GO:0016647 - oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009178396.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF026098.2
pyrroline-5-carboxylate reductase dimerization domain-containing protein
COORDINATES: protein motif:HMM:TIGR02122.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: protein motif:HMM:TIGR02123.1
COORDINATES: protein motif:HMM:NF012161.0
GO:0008800 - beta-lactamase activity [Evidence IEA]
GO:0030655 - beta-lactam antibiotic catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013845819.1
COORDINATES: similar to AA sequence:RefSeq:WP_019620255.1
COORDINATES: protein motif:HMM:NF024863.2
GDSL-type esterase/lipase family protein
COORDINATES: protein motif:HMM:NF014476.2
COORDINATES: similar to AA sequence:RefSeq:WP_006469648.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019403085.1
COORDINATES: similar to AA sequence:RefSeq:WP_013762453.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611445.1
COORDINATES: similar to AA sequence:RefSeq:WP_014341627.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014132954.1
COORDINATES: similar to AA sequence:RefSeq:WP_019827207.1
COORDINATES: similar to AA sequence:RefSeq:WP_018973340.1
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: protein motif:HMM:NF040521.1
COORDINATES: similar to AA sequence:RefSeq:WP_019298053.1
COORDINATES: similar to AA sequence:RefSeq:WP_008279263.1
COORDINATES: similar to AA sequence:RefSeq:WP_019298051.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611562.1
COORDINATES: similar to AA sequence:RefSeq:WP_010397121.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]